Citrus Sinensis ID: 021893

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300------
Protein Sequence
MQAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPKPADAPATPCHRCGRNLYG
Secondary Structure (PSIPRED)
ccEEEEEEccccccHHHHHHHccccccccccccccccccEEEEcccHHHHHHHHHHccccEEEEEEcccccccccccccccHHHHHHHHHHHcccEEEEEcccccccccccccHHcccccccHHHHHHHHccccccccEEEEEcHHHHHccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccEEEEEEccccccccHHHHHHHHHHcccEEccccccEEEEcccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEccccccccHHHHHccccHHHHcccccccccEEEEccccHHHHHHHHHHccccEEEEEEcccEcccccEcccccHHHHHHHHHHHcccEEEEEcccccccccccccHHHHHcccccEEEEcHHHHccccccEEEEEcHHHHcccccccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccHHHcccHHEEEccccEEEEEEEccccccccHHHHHHHHHHcccEEEcccccEEEEccccEEcHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccc
Coil and Loop (DISEMBL)
MQAIIVSCCGCFHGRTLAAISMSCdneairgfgpllpghlkvdfgDITALEKIFKESGDQIagflfepiqgeagviippdgyLKAVRDLCSKYNILMIADEIQSGLARSgrmlasdweevrpDMVILGKAlgggvipvsavladkevmlciqpgehgstfggnpLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEvrgrglfnavefdktalpvsAYDICLKMKergilakpthdtivrltpplsissnelQEGSKALHDVLeldlpkmrkpkpadapatpchrcgrnlyg
Flexible Loop (DISEMBL)
MQAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFnavefdktalpvSAYDICLKMKERgilakpthdtivrlTPPLSISSNELQEGSKALHDVLELDLpkmrkpkpadapatpchrcgrnlyg
Low Complexity Region (SEG)
MQAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPKPADAPATPCHRCGRNLYG
Disordered region (IsUnstruct)
**AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLT**************************************************
Disordered Region (DISOPRED)
MQAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE*********************CGRNL**
Disordered Region (DISEMBL)
MQAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKM**********TPCHRCGRNLYG
Disordered Region (DISPRO)
MQAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKP*********CHRC******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPKPADAPATPCHRCGRNLYG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	306	2.2.26 [Sep-21-2011]
Q9FNK4	475	Ornithine aminotransferas	yes	no	0.996	0.642	0.789	1e-142
Q10G56	473	Ornithine aminotransferas	yes	no	0.993	0.642	0.720	1e-131
Q54JP5	416	Probable ornithine aminot	yes	no	0.892	0.656	0.523	2e-85
C4L2E7	400	Ornithine aminotransferas	yes	no	0.866	0.662	0.532	1e-78
P60299	396	Ornithine aminotransferas	yes	no	0.869	0.671	0.534	9e-78
Q6GAW9	396	Ornithine aminotransferas	yes	no	0.869	0.671	0.534	9e-78
P60298	396	Ornithine aminotransferas	yes	no	0.869	0.671	0.534	9e-78
P60297	396	Ornithine aminotransferas	yes	no	0.869	0.671	0.534	9e-78
Q5HHC8	396	Ornithine aminotransferas	yes	no	0.869	0.671	0.534	9e-78
B9DIU0	396	Ornithine aminotransferas	yes	no	0.866	0.669	0.532	5e-77

>sp|Q9FNK4|OAT_ARATH Ornithine aminotransferase, mitochondrial OS=Arabidopsis thaliana GN=DELTA-OAT PE=1 SV=1

 Score =  505 bits (1301), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 244/309 (78%), Positives = 276/309 (89%), Gaps = 4/309 (1%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +AIIVSCCGCFHGRTLA +SMSCDN+A RGFGPLLPG+LKVDFGD  +LEKIFKE GD+I
Sbjct: 167 EAIIVSCCGCFHGRTLAIVSMSCDNDATRGFGPLLPGNLKVDFGDADSLEKIFKEKGDRI 226

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           AGFLFEPIQGEAGVIIPPDGYLKAVR+LC+KYN+LMIADE+QSGLARSG+MLA DWEE+R
Sbjct: 227 AGFLFEPIQGEAGVIIPPDGYLKAVRELCTKYNVLMIADEVQSGLARSGKMLACDWEEIR 286

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PDMVILGKALGGGVIPVSAVLADK+VML I+PG+HGSTFGGNPLASAVA+ASLDVI +EK
Sbjct: 287 PDMVILGKALGGGVIPVSAVLADKDVMLHIKPGQHGSTFGGNPLASAVAMASLDVIVEEK 346

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDICLKMKE 240
           L ERSA LGEELR  L +I++QFP Y+KEVRGRGLFNA+EF+  +L PVSAYDICL +KE
Sbjct: 347 LVERSASLGEELRIQLNEIKKQFPKYIKEVRGRGLFNAIEFNSESLSPVSAYDICLSLKE 406

Query: 241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPKPADAPA---TPC 297
           RG+LAKPTH+TIVRLTPPLSISS+EL++GS+ALHDVLELDLP + K      P    T C
Sbjct: 407 RGVLAKPTHNTIVRLTPPLSISSDELRDGSEALHDVLELDLPNLLKINSGKTPVSHITEC 466

Query: 298 HRCGRNLYG 306
            RCGRNLY 
Sbjct: 467 DRCGRNLYA 475

Mediates degradation of arginine for nitrogen recycling. Plays a role in non-host disease resistance by regulating pyrroline-5-carboxylate metabolism-induced hypersensitive response.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 1EC: 3

>sp|Q10G56|OAT_ORYSJ Ornithine aminotransferase, mitochondrial OS=Oryza sativa subsp. japonica GN=OAT PE=2 SV=1

 Score =  467 bits (1201), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 222/308 (72%), Positives = 259/308 (84%), Gaps = 4/308 (1%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +A+IVSCCGCFHGRTL  ISMSCDN+A RGFGPL+PGHLKVDFGD   LEKIFK+ G++I
Sbjct: 166 EALIVSCCGCFHGRTLGVISMSCDNDATRGFGPLVPGHLKVDFGDTDGLEKIFKDHGERI 225

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
            GFLFEPIQGEAGVIIPPDGYLKAVRDLCS++NILMIADEIQ+G+AR+G+MLA DWE +R
Sbjct: 226 CGFLFEPIQGEAGVIIPPDGYLKAVRDLCSRHNILMIADEIQTGIARTGKMLACDWENIR 285

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+VILGKALG GV+PVSAVLADK++MLCI+PGEHGSTFGGNPLASAVA+ASL V+ DE 
Sbjct: 286 PDVVILGKALGAGVVPVSAVLADKDIMLCIKPGEHGSTFGGNPLASAVAVASLKVVTDEG 345

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDICLKMKE 240
           L ER+A LG+E R  L K+QQ+FP  ++EVRGRGL NAV+    AL P SAYDIC+K+KE
Sbjct: 346 LVERAAKLGQEFRDQLQKVQQRFPQIIREVRGRGLLNAVDLSNEALSPASAYDICIKLKE 405

Query: 241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMR---KPKPADAPATPC 297
           RG+LAKPTHDTI+RL PPLSIS  EL E SKA  DVLE DLP+++   K   + A    C
Sbjct: 406 RGVLAKPTHDTIIRLAPPLSISPEELAEASKAFSDVLEHDLPQLQKQIKKTESAAEKQSC 465

Query: 298 HRCGRNLY 305
            RCGR+LY
Sbjct: 466 DRCGRDLY 473

Confers drought and oxidative stress tolerance mainly through enhancing ROS-scavenging capacity and Pro pre-accumulation.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q54JP5|OAT_DICDI Probable ornithine aminotransferase OS=Dictyostelium discoideum GN=oatA PE=3 SV=1

 Score =  316 bits (809), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 145/277 (52%), Positives = 202/277 (72%), Gaps = 4/277 (1%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           QAI++SC GCFHGRT+  ISMS D  +   +GPL+ G +K+D+     LE++  +  D++
Sbjct: 140 QAIVISCKGCFHGRTIGVISMSDDPSSYNKYGPLMNGIIKIDYNSTQQLEEVLSQHADRV 199

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
            GF+ EPIQGEAGV++P +GYLK   +LC KYN+L++ADEIQ+GL R+GRML SDW+ ++
Sbjct: 200 CGFIVEPIQGEAGVVVPDEGYLKKCYELCKKYNVLLVADEIQTGLCRTGRMLCSDWDGIK 259

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+V+LGKA+ GG++P+SAVL  K+VML I+PGEHGST+GG+PLASAVA+A+LDV+RDE 
Sbjct: 260 PDLVLLGKAISGGLLPISAVLGGKDVMLTIKPGEHGSTYGGSPLASAVAMAALDVLRDEN 319

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           LAE +  LGE  R  +  I       ++ VRG+GL NA+  D     VSA+DIC+K  E 
Sbjct: 320 LAENAQKLGEHFRAQISNINHP---AIQLVRGKGLLNAIVIDPN-FTVSAWDICIKFAEN 375

Query: 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           G+LAKPTHD I+RL PPL+I+  ++ +    +  V +
Sbjct: 376 GLLAKPTHDNIIRLAPPLTITLEQIDQCVSIIKKVFD 412

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

EC: 3

>sp|C4L2E7|OAT_EXISA Ornithine aminotransferase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=rocD PE=3 SV=1

 Score =  293 bits (750), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 147/276 (53%), Positives = 188/276 (68%), Gaps = 11/276 (3%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           QA I+ C G FHGRT+AA+SMS + E  RGFGPLLPG   V +GDI A E    E+    
Sbjct: 130 QAEIIVCSGNFHGRTMAAVSMSTEAEYQRGFGPLLPGFKVVPYGDIDAFEAAITEN---T 186

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           A F+ EPIQGEAG+IIPP GYLK   +LC ++N+L +ADEIQSGL RSG+  A +WE+V 
Sbjct: 187 AAFIVEPIQGEAGIIIPPAGYLKRASELCKEHNVLFVADEIQSGLGRSGKWFAIEWEDVT 246

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PDM ILGKALGGGV P+S V AD+E++    PG HGSTFGGNPLASAV++A+L+V+ +E 
Sbjct: 247 PDMYILGKALGGGVFPISCVAADQEILSVFNPGSHGSTFGGNPLASAVSVAALEVLEEEN 306

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           L ERS  LG      L  I       +++VRGRGLF  +E  ++A P      C  +KER
Sbjct: 307 LPERSLELGTYFMDRLKSIDNPM---IRDVRGRGLFIGIELTESARPY-----CEALKER 358

Query: 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           G+L K TH+T++RL PPL I+  EL +  +A+  VL
Sbjct: 359 GLLCKETHETVIRLAPPLVITKEELDQAFEAIEAVL 394

Catalyzes the interconversion of ornithine to glutamate semialdehyde.

Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) (taxid: 360911)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

EC: 3

>sp|P60299|OAT2_STAAW Ornithine aminotransferase 2 OS=Staphylococcus aureus (strain MW2) GN=rocD2 PE=3 SV=1

 Score =  290 bits (742), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 148/277 (53%), Positives = 194/277 (70%), Gaps = 11/277 (3%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +A I++  G FHGRT+A +S+S + E  RG+GPLL G  KVDFGD+ AL+    E+    
Sbjct: 131 KAEIIAFNGNFHGRTMAPVSLSSEAEYQRGYGPLLDGFRKVDFGDVDALKAAINEN---T 187

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           A  L EPIQGEAG+ IPP+GYLKA+R+LC ++N+L IADEIQ+GL RSG++ A+DW+ V+
Sbjct: 188 AAVLVEPIQGEAGINIPPEGYLKAIRELCDEHNVLFIADEIQAGLGRSGKLFATDWDNVK 247

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+ ILGKALGGGV P+S VLADKEV+    PG HGSTFGGNPLA A +IA+LDVI DE 
Sbjct: 248 PDVYILGKALGGGVFPISVVLADKEVLDVFTPGSHGSTFGGNPLACAASIAALDVIVDED 307

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           L  RS  LG+  ++ L +I    P+ +KEVRGRGLF  VE +++A P      C  +KE 
Sbjct: 308 LPGRSLELGDYFKEQLKQIDH--PS-IKEVRGRGLFIGVELNESARPY-----CEALKEE 359

Query: 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           G+L K THDT++R  PPL I+  EL    + +  V +
Sbjct: 360 GLLCKETHDTVIRFAPPLIITKEELDLALEKIRHVFQ 396

Catalyzes the interconversion of ornithine to glutamate semialdehyde.

Staphylococcus aureus (strain MW2) (taxid: 196620)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q6GAW9|OAT2_STAAS Ornithine aminotransferase 2 OS=Staphylococcus aureus (strain MSSA476) GN=rocD2 PE=3 SV=1

 Score =  290 bits (742), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 148/277 (53%), Positives = 194/277 (70%), Gaps = 11/277 (3%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +A I++  G FHGRT+A +S+S + E  RG+GPLL G  KVDFGD+ AL+    E+    
Sbjct: 131 KAEIIAFNGNFHGRTMAPVSLSSEAEYQRGYGPLLDGFRKVDFGDVDALKAAINEN---T 187

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           A  L EPIQGEAG+ IPP+GYLKA+R+LC ++N+L IADEIQ+GL RSG++ A+DW+ V+
Sbjct: 188 AAVLVEPIQGEAGINIPPEGYLKAIRELCDEHNVLFIADEIQAGLGRSGKLFATDWDNVK 247

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+ ILGKALGGGV P+S VLADKEV+    PG HGSTFGGNPLA A +IA+LDVI DE 
Sbjct: 248 PDVYILGKALGGGVFPISVVLADKEVLDVFTPGSHGSTFGGNPLACAASIAALDVIVDED 307

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           L  RS  LG+  ++ L +I    P+ +KEVRGRGLF  VE +++A P      C  +KE 
Sbjct: 308 LPGRSLELGDYFKEQLKQIDH--PS-IKEVRGRGLFIGVELNESARPY-----CEALKEE 359

Query: 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           G+L K THDT++R  PPL I+  EL    + +  V +
Sbjct: 360 GLLCKETHDTVIRFAPPLIITKEELDLALEKIRHVFQ 396

Catalyzes the interconversion of ornithine to glutamate semialdehyde.

Staphylococcus aureus (strain MSSA476) (taxid: 282459)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

EC: 3

>sp|P60298|OAT2_STAAN Ornithine aminotransferase 2 OS=Staphylococcus aureus (strain N315) GN=rocD2 PE=1 SV=1

 Score =  290 bits (742), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 148/277 (53%), Positives = 194/277 (70%), Gaps = 11/277 (3%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +A I++  G FHGRT+A +S+S + E  RG+GPLL G  KVDFGD+ AL+    E+    
Sbjct: 131 KAEIIAFNGNFHGRTMAPVSLSSEAEYQRGYGPLLDGFRKVDFGDVDALKAAINEN---T 187

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           A  L EPIQGEAG+ IPP+GYLKA+R+LC ++N+L IADEIQ+GL RSG++ A+DW+ V+
Sbjct: 188 AAVLVEPIQGEAGINIPPEGYLKAIRELCDEHNVLFIADEIQAGLGRSGKLFATDWDNVK 247

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+ ILGKALGGGV P+S VLADKEV+    PG HGSTFGGNPLA A +IA+LDVI DE 
Sbjct: 248 PDVYILGKALGGGVFPISVVLADKEVLDVFTPGSHGSTFGGNPLACAASIAALDVIVDED 307

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           L  RS  LG+  ++ L +I    P+ +KEVRGRGLF  VE +++A P      C  +KE 
Sbjct: 308 LPGRSLELGDYFKEQLKQIDH--PS-IKEVRGRGLFIGVELNESARPY-----CEALKEE 359

Query: 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           G+L K THDT++R  PPL I+  EL    + +  V +
Sbjct: 360 GLLCKETHDTVIRFAPPLIITKEELDLALEKIRHVFQ 396

Catalyzes the interconversion of ornithine to glutamate semialdehyde.

Staphylococcus aureus (strain N315) (taxid: 158879)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

EC: 3

>sp|P60297|OAT2_STAAM Ornithine aminotransferase 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rocD2 PE=1 SV=1

 Score =  290 bits (742), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 148/277 (53%), Positives = 194/277 (70%), Gaps = 11/277 (3%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +A I++  G FHGRT+A +S+S + E  RG+GPLL G  KVDFGD+ AL+    E+    
Sbjct: 131 KAEIIAFNGNFHGRTMAPVSLSSEAEYQRGYGPLLDGFRKVDFGDVDALKAAINEN---T 187

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           A  L EPIQGEAG+ IPP+GYLKA+R+LC ++N+L IADEIQ+GL RSG++ A+DW+ V+
Sbjct: 188 AAVLVEPIQGEAGINIPPEGYLKAIRELCDEHNVLFIADEIQAGLGRSGKLFATDWDNVK 247

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+ ILGKALGGGV P+S VLADKEV+    PG HGSTFGGNPLA A +IA+LDVI DE 
Sbjct: 248 PDVYILGKALGGGVFPISVVLADKEVLDVFTPGSHGSTFGGNPLACAASIAALDVIVDED 307

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           L  RS  LG+  ++ L +I    P+ +KEVRGRGLF  VE +++A P      C  +KE 
Sbjct: 308 LPGRSLELGDYFKEQLKQIDH--PS-IKEVRGRGLFIGVELNESARPY-----CEALKEE 359

Query: 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           G+L K THDT++R  PPL I+  EL    + +  V +
Sbjct: 360 GLLCKETHDTVIRFAPPLIITKEELDLALEKIRHVFQ 396

Catalyzes the interconversion of ornithine to glutamate semialdehyde.

Staphylococcus aureus (strain Mu50 / ATCC 700699) (taxid: 158878)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q5HHC8|OAT2_STAAC Ornithine aminotransferase 2 OS=Staphylococcus aureus (strain COL) GN=rocD2 PE=3 SV=1

 Score =  290 bits (742), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 148/277 (53%), Positives = 194/277 (70%), Gaps = 11/277 (3%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +A I++  G FHGRT+A +S+S + E  RG+GPLL G  KVDFGD+ AL+    E+    
Sbjct: 131 KAEIIAFNGNFHGRTMAPVSLSSEAEYQRGYGPLLDGFRKVDFGDVDALKAAINEN---T 187

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           A  L EPIQGEAG+ IPP+GYLKA+R+LC ++N+L IADEIQ+GL RSG++ A+DW+ V+
Sbjct: 188 AAVLVEPIQGEAGINIPPEGYLKAIRELCDEHNVLFIADEIQAGLGRSGKLFATDWDNVK 247

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+ ILGKALGGGV P+S VLADKEV+    PG HGSTFGGNPLA A +IA+LDVI DE 
Sbjct: 248 PDVYILGKALGGGVFPISVVLADKEVLDVFTPGSHGSTFGGNPLACAASIAALDVIVDED 307

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           L  RS  LG+  ++ L +I    P+ +KEVRGRGLF  VE +++A P      C  +KE 
Sbjct: 308 LPGRSLELGDYFKEQLKQIDH--PS-IKEVRGRGLFIGVELNESARPY-----CEALKEE 359

Query: 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           G+L K THDT++R  PPL I+  EL    + +  V +
Sbjct: 360 GLLCKETHDTVIRFAPPLIITKEELDLALEKIRHVFQ 396

Catalyzes the interconversion of ornithine to glutamate semialdehyde.

Staphylococcus aureus (strain COL) (taxid: 93062)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

EC: 3

>sp|B9DIU0|OAT_STACT Ornithine aminotransferase OS=Staphylococcus carnosus (strain TM300) GN=rocD PE=3 SV=1

 Score =  288 bits (736), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 147/276 (53%), Positives = 189/276 (68%), Gaps = 11/276 (3%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +A I++  G FHGRT+A +S+S + E  RG+GPLL G LKVDFGD+  L+    E+    
Sbjct: 131 KAEIIAFNGNFHGRTMAPVSLSSEAEYQRGYGPLLEGFLKVDFGDVDQLKDAINEN---T 187

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           A  L EPIQGEAG+ +PP+GYLK +R L  + NIL IADEIQSGL RSG+  A+DW+ V+
Sbjct: 188 AAILVEPIQGEAGINVPPEGYLKEIRKLADENNILFIADEIQSGLGRSGKTFATDWDGVK 247

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
            D+ ILGKALGGGV+P+SAV AD EV+    PG HGSTFGGNPLA+AV+IA+LDV+ DEK
Sbjct: 248 LDVYILGKALGGGVLPISAVAADSEVLDVFTPGSHGSTFGGNPLAAAVSIAALDVLEDEK 307

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           LAERS  LGE  +  L KI       +KEVRGRGLF  VE ++ A P +       +KE 
Sbjct: 308 LAERSRELGEYFQDELKKIDNPV---IKEVRGRGLFIGVELNEDARPYAE-----ALKEE 359

Query: 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           G+L K THDT++R  PPL I+  E+ +  + +  V 
Sbjct: 360 GLLCKETHDTVIRFAPPLIITKEEIDDALERIKKVF 395

Catalyzes the interconversion of ornithine to glutamate semialdehyde.

Staphylococcus carnosus (strain TM300) (taxid: 396513)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	306
255557233	473	ornithine aminotransferase, putative [Ri	0.996	0.644	0.825	1e-148
346980456	478	ornithine aminotransferase [Malus hupehe	0.993	0.635	0.824	1e-147
224116376	469	predicted protein [Populus trichocarpa]	0.986	0.643	0.826	1e-146
304650830	477	ornithine aminotransferase [Nicotiana ta	0.996	0.639	0.815	1e-145
449439181	473	PREDICTED: probable ornithine aminotrans	0.996	0.644	0.815	1e-144
149938950	323	OAT1 [Actinidia chinensis]	0.986	0.934	0.801	1e-142
297791071	475	delta-OAT [Arabidopsis lyrata subsp. lyr	0.996	0.642	0.789	1e-141
15237392	475	ornithine-delta-aminotransferase [Arabid	0.996	0.642	0.789	1e-141
157890950	477	ornithine-oxo-acid transaminase [Brassic	0.993	0.637	0.788	1e-140
225443914	466	PREDICTED: probable ornithine aminotrans	0.990	0.650	0.798	1e-139

>gi|255557233|ref|XP_002519647.1| ornithine aminotransferase, putative [Ricinus communis] gi|223541064|gb|EEF42620.1| ornithine aminotransferase, putative [Ricinus communis]

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 255/309 (82%), Positives = 279/309 (90%), Gaps = 4/309 (1%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +AIIVSCCGCFHGRT+A ISMSCDNEA RGFGPLLPGH KVDFGD  ALEKIFKE GD+I
Sbjct: 162 EAIIVSCCGCFHGRTIAVISMSCDNEATRGFGPLLPGHFKVDFGDEVALEKIFKERGDRI 221

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           AGFLFEPIQGEAGV+IPPDGYLKAVRDLCSKYN+LMIADEIQ+GLAR+G+MLA DWE+VR
Sbjct: 222 AGFLFEPIQGEAGVVIPPDGYLKAVRDLCSKYNVLMIADEIQTGLARTGKMLACDWEQVR 281

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+VILGKALGGGVIPVSAVLADK+VMLCIQPGEHGSTFGGNPLASAVA+ASLDV+ DE 
Sbjct: 282 PDVVILGKALGGGVIPVSAVLADKDVMLCIQPGEHGSTFGGNPLASAVAVASLDVVIDEG 341

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDICLKMKE 240
           LAERSA LGEELR  L K+QQQFP+Y+KEVRGRGLFNAVEFD  AL P+SAYDICLK+KE
Sbjct: 342 LAERSAQLGEELRDQLLKVQQQFPDYIKEVRGRGLFNAVEFDSKALSPISAYDICLKLKE 401

Query: 241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPKP---ADAPATPC 297
           RGILAKPTHDTIVRLTPPLS+S +ELQEGSKAL +VLE DLP + K KP   + A +T C
Sbjct: 402 RGILAKPTHDTIVRLTPPLSMSLDELQEGSKALREVLEFDLPNLLKDKPEKASSAASTSC 461

Query: 298 HRCGRNLYG 306
            RCGRNLY 
Sbjct: 462 DRCGRNLYA 470

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|346980456|gb|AEO51063.1| ornithine aminotransferase [Malus hupehensis]

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 254/308 (82%), Positives = 277/308 (89%), Gaps = 4/308 (1%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +AIIVSCCGCFHGRTLA ISMSCDNEA RGFGPLLPGHLKVDFGD   LEK+FKE+GD+I
Sbjct: 164 EAIIVSCCGCFHGRTLAVISMSCDNEATRGFGPLLPGHLKVDFGDAVGLEKVFKENGDRI 223

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           AGFLFEPIQGEAGVIIPPDGYLK VRDLCSKYN+LMIADEIQSGLARSG+MLA DWEEVR
Sbjct: 224 AGFLFEPIQGEAGVIIPPDGYLKTVRDLCSKYNVLMIADEIQSGLARSGKMLAVDWEEVR 283

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+VILGKALGGGVIPVSAVLADK VMLCI+PGEHGSTFGGNPLASAVA+ASLDVIR E+
Sbjct: 284 PDVVILGKALGGGVIPVSAVLADKNVMLCIRPGEHGSTFGGNPLASAVAVASLDVIRHER 343

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDICLKMKE 240
           LAERSA +G+ELR  L KIQQQFPNY+KEVRGRGLFNAVE +   L P+SAYDICLK+KE
Sbjct: 344 LAERSAEMGQELRNQLVKIQQQFPNYIKEVRGRGLFNAVELNSKNLSPISAYDICLKLKE 403

Query: 241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPKPADAPATP---C 297
           +G+LAKPTHDTI+RLTPPLSIS  E+QEGSKAL DVLE DLPKM+K KP +  +T    C
Sbjct: 404 KGVLAKPTHDTIIRLTPPLSISLEEVQEGSKALSDVLEHDLPKMQKEKPENTSSTASNIC 463

Query: 298 HRCGRNLY 305
            RCGRNLY
Sbjct: 464 DRCGRNLY 471

Source: Malus hupehensis

Species: Malus hupehensis

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116376|ref|XP_002317282.1| predicted protein [Populus trichocarpa] gi|222860347|gb|EEE97894.1| predicted protein [Populus trichocarpa]

 Score =  523 bits (1348), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 252/305 (82%), Positives = 280/305 (91%), Gaps = 3/305 (0%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +AII+SCCGCFHGRTLAAISMSCDNEA RGFGPLL GHLKVDFGD+ +LEK F+E GD+I
Sbjct: 164 EAIIISCCGCFHGRTLAAISMSCDNEATRGFGPLLSGHLKVDFGDVVSLEKSFREQGDRI 223

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           AGFLFEPIQGEAGVIIPPDGYLK+VRDLCSKYN+LMIADEIQ+GLAR+G+MLA DWE+VR
Sbjct: 224 AGFLFEPIQGEAGVIIPPDGYLKSVRDLCSKYNVLMIADEIQTGLARTGKMLACDWEQVR 283

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+VILGKALGGGVIPVSAVLADK+VMLCI+PGEHGSTFGGNPLASAVAIASLDVI++E 
Sbjct: 284 PDVVILGKALGGGVIPVSAVLADKDVMLCIRPGEHGSTFGGNPLASAVAIASLDVIKEEG 343

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD-KTALPVSAYDICLKMKE 240
           LAERS HLG+ELR  L K+QQQFP+ +KEVRGRGLFNAVEF+ KT  PVSAYDICLK+KE
Sbjct: 344 LAERSYHLGKELRHQLLKVQQQFPDIIKEVRGRGLFNAVEFNSKTLSPVSAYDICLKLKE 403

Query: 241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPKPADAP--ATPCH 298
           RG+LAKPTHDTIVRLTPPLSISS+ELQEGSK LH+VLELDLPKM+  KP   P  +T C 
Sbjct: 404 RGVLAKPTHDTIVRLTPPLSISSDELQEGSKTLHEVLELDLPKMKAAKPEKMPIASTTCD 463

Query: 299 RCGRN 303
           RCGRN
Sbjct: 464 RCGRN 468

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|304650830|gb|ADM47437.1| ornithine aminotransferase [Nicotiana tabacum]

 Score =  521 bits (1342), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 252/309 (81%), Positives = 279/309 (90%), Gaps = 4/309 (1%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           + IIVSCCGCFHGRTLAAISMSCDNEA RGF PLLPG LKVDFGD  ALEK+FKE GDQI
Sbjct: 167 EVIIVSCCGCFHGRTLAAISMSCDNEATRGFWPLLPGQLKVDFGDAVALEKLFKEKGDQI 226

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           AGFLFEPIQGEAGVIIPP+GYLKAVRDLCSKYNILMIADEIQSGLARSGR+LA DWEEVR
Sbjct: 227 AGFLFEPIQGEAGVIIPPEGYLKAVRDLCSKYNILMIADEIQSGLARSGRLLACDWEEVR 286

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
            D+VILGKALGGGV+PVSAVLADK+VMLCIQ GEHGSTFGGNPLASAVAIASLDVIR+E 
Sbjct: 287 SDVVILGKALGGGVLPVSAVLADKDVMLCIQAGEHGSTFGGNPLASAVAIASLDVIREEG 346

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD-KTALPVSAYDICLKMKE 240
           LAERSA +GE+LR  L K+Q+QFPN++KEVRG+GLFNAVE + K+ LPV+AYDIC+K+KE
Sbjct: 347 LAERSAQMGEQLRHQLMKVQEQFPNFIKEVRGKGLFNAVELNSKSLLPVTAYDICMKLKE 406

Query: 241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPKPAD---APATPC 297
           RGILAKPTHD+I+RLTPPLS+S  ELQEGSKALHDV E+DL KM+K KPA    A ++ C
Sbjct: 407 RGILAKPTHDSIIRLTPPLSMSLEELQEGSKALHDVFEVDLLKMQKEKPATVSHATSSVC 466

Query: 298 HRCGRNLYG 306
            RCGRNLYG
Sbjct: 467 DRCGRNLYG 475

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439181|ref|XP_004137365.1| PREDICTED: probable ornithine aminotransferase-like [Cucumis sativus]

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 252/309 (81%), Positives = 277/309 (89%), Gaps = 4/309 (1%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +A IVSCCGCFHGRTL  ISMSCDNEA R FGPLLPGHLKVDFGD  ALEKIFKE GD+I
Sbjct: 162 EAFIVSCCGCFHGRTLGVISMSCDNEATREFGPLLPGHLKVDFGDADALEKIFKEHGDRI 221

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           AGFLFEPIQGEAGVIIPPDGYLKAVRDLC+KYNILMIADEIQSGLARSG++LA DWE VR
Sbjct: 222 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCTKYNILMIADEIQSGLARSGKLLACDWENVR 281

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASL+VI+DE+
Sbjct: 282 PDLVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLEVIKDER 341

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDICLKMKE 240
           LAERSA LGEEL++ L KIQ++FP Y+K VRGRGLFNAVE    AL PVSAYDIC+K+KE
Sbjct: 342 LAERSAKLGEELKEQLIKIQERFPQYIKNVRGRGLFNAVELKGKALSPVSAYDICMKLKE 401

Query: 241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPKPADAPATP---C 297
           RG+LAKPTHDTI+RLTPPLSIS +EL+EGSKA+HDVLE+DLPK+ K KP  A ++    C
Sbjct: 402 RGVLAKPTHDTIIRLTPPLSISLDELKEGSKAVHDVLEIDLPKLMKEKPHTASSSDSNIC 461

Query: 298 HRCGRNLYG 306
            RCGRNLY 
Sbjct: 462 DRCGRNLYA 470

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|149938950|gb|ABR45720.1| OAT1 [Actinidia chinensis]

 Score =  509 bits (1311), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 247/308 (80%), Positives = 274/308 (88%), Gaps = 6/308 (1%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +AIIVSCCGCFHGRTL  ISMSCDNEA RGFGPLLPGH+KVDFGD  ALEKIFKE GD+I
Sbjct: 15  EAIIVSCCGCFHGRTLGVISMSCDNEATRGFGPLLPGHVKVDFGDEVALEKIFKEKGDRI 74

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           AGFLFEPIQGEAGVIIPPDGYLKA+RDLC+KYNILM+ADEIQ+GLAR+GRMLA DWEE+R
Sbjct: 75  AGFLFEPIQGEAGVIIPPDGYLKAIRDLCTKYNILMVADEIQTGLARTGRMLACDWEEIR 134

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+VILGKALGGGV+PVSAVLADK+VMLCIQPGEHGSTFGGNP+ASAVA+ASL+VI+DEK
Sbjct: 135 PDVVILGKALGGGVVPVSAVLADKDVMLCIQPGEHGSTFGGNPMASAVAVASLEVIKDEK 194

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDICLKMKE 240
           LAERS  +G+ELR  L K+QQQFPN +KEVRG+GLFNAVE +  AL PVSAYDIC+K+KE
Sbjct: 195 LAERSDQMGQELRHQLIKVQQQFPNVIKEVRGKGLFNAVELNSKALFPVSAYDICIKLKE 254

Query: 241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK--MRKPKPADAPATP-- 296
           RGILAKPTHDTI+RLTPPL IS  ELQ GSKAL DVLELDLPK  M+  KP   P+T   
Sbjct: 255 RGILAKPTHDTIIRLTPPLCISLEELQGGSKALQDVLELDLPKMQMQNAKPETLPSTASH 314

Query: 297 -CHRCGRN 303
            C RCGRN
Sbjct: 315 VCDRCGRN 322

Source: Actinidia chinensis

Species: Actinidia chinensis

Genus: Actinidia

Family: Actinidiaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297791071|ref|XP_002863420.1| delta-OAT [Arabidopsis lyrata subsp. lyrata] gi|297309255|gb|EFH39679.1| delta-OAT [Arabidopsis lyrata subsp. lyrata]

 Score =  505 bits (1301), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 244/309 (78%), Positives = 276/309 (89%), Gaps = 4/309 (1%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           + IIVSCCGCFHGRTLA ISMSCDN+A RGFGPLLPG+LKVDFGD  +LEKIFKE G++I
Sbjct: 167 EVIIVSCCGCFHGRTLAIISMSCDNDATRGFGPLLPGNLKVDFGDADSLEKIFKEKGEKI 226

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           AGFLFEPIQGEAGVIIPPDGYLKAVR+LC+K+N+LMIADE+QSGLARSG+MLA DWEE+R
Sbjct: 227 AGFLFEPIQGEAGVIIPPDGYLKAVRELCTKHNVLMIADEVQSGLARSGKMLACDWEEIR 286

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PDMVILGKALGGGVIPVSAVLADK+VML I+PG+HGSTFGGNPLASAVA+ASLDVI +EK
Sbjct: 287 PDMVILGKALGGGVIPVSAVLADKDVMLHIKPGQHGSTFGGNPLASAVAMASLDVIEEEK 346

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDICLKMKE 240
           L ERSA LGEELR  L +I++QFP Y+KEVRGRGLFNA+EF+  +L PVSAYDICL +KE
Sbjct: 347 LVERSASLGEELRIQLNEIKKQFPKYIKEVRGRGLFNAIEFNSESLSPVSAYDICLSLKE 406

Query: 241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPKPADAPA---TPC 297
           RG+LAKPTH+TIVRLTPPLSISS+EL+EGSKALHDVLELDLP +R+      P    T C
Sbjct: 407 RGVLAKPTHNTIVRLTPPLSISSDELREGSKALHDVLELDLPNLREINSGKTPVSHITEC 466

Query: 298 HRCGRNLYG 306
            RCGRNLY 
Sbjct: 467 DRCGRNLYA 475

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15237392|ref|NP_199430.1| ornithine-delta-aminotransferase [Arabidopsis thaliana] gi|9757738|dbj|BAB08263.1| ornithine aminotransferase [Arabidopsis thaliana] gi|66792620|gb|AAY56412.1| At5g46180 [Arabidopsis thaliana] gi|115646724|gb|ABJ17095.1| At5g46180 [Arabidopsis thaliana] gi|332007967|gb|AED95350.1| ornithine-delta-aminotransferase [Arabidopsis thaliana]

 Score =  505 bits (1301), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 244/309 (78%), Positives = 276/309 (89%), Gaps = 4/309 (1%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +AIIVSCCGCFHGRTLA +SMSCDN+A RGFGPLLPG+LKVDFGD  +LEKIFKE GD+I
Sbjct: 167 EAIIVSCCGCFHGRTLAIVSMSCDNDATRGFGPLLPGNLKVDFGDADSLEKIFKEKGDRI 226

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           AGFLFEPIQGEAGVIIPPDGYLKAVR+LC+KYN+LMIADE+QSGLARSG+MLA DWEE+R
Sbjct: 227 AGFLFEPIQGEAGVIIPPDGYLKAVRELCTKYNVLMIADEVQSGLARSGKMLACDWEEIR 286

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PDMVILGKALGGGVIPVSAVLADK+VML I+PG+HGSTFGGNPLASAVA+ASLDVI +EK
Sbjct: 287 PDMVILGKALGGGVIPVSAVLADKDVMLHIKPGQHGSTFGGNPLASAVAMASLDVIVEEK 346

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDICLKMKE 240
           L ERSA LGEELR  L +I++QFP Y+KEVRGRGLFNA+EF+  +L PVSAYDICL +KE
Sbjct: 347 LVERSASLGEELRIQLNEIKKQFPKYIKEVRGRGLFNAIEFNSESLSPVSAYDICLSLKE 406

Query: 241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPKPADAPA---TPC 297
           RG+LAKPTH+TIVRLTPPLSISS+EL++GS+ALHDVLELDLP + K      P    T C
Sbjct: 407 RGVLAKPTHNTIVRLTPPLSISSDELRDGSEALHDVLELDLPNLLKINSGKTPVSHITEC 466

Query: 298 HRCGRNLYG 306
            RCGRNLY 
Sbjct: 467 DRCGRNLYA 475

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|157890950|dbj|BAF81516.1| ornithine-oxo-acid transaminase [Brassica rapa]

 Score =  502 bits (1293), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 243/308 (78%), Positives = 277/308 (89%), Gaps = 4/308 (1%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +A+IVSCCGCFHGRTLA ISMSCDN+A RGFGPLLPG+LKVDFGD  +LEKIFKE GD+I
Sbjct: 169 EALIVSCCGCFHGRTLAVISMSCDNDATRGFGPLLPGNLKVDFGDADSLEKIFKEKGDKI 228

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           AGFLFEPIQGEAGV+IPP GYLKAVR+LC+K+N+LMIADE+QSGLARSG+MLA DWEE+R
Sbjct: 229 AGFLFEPIQGEAGVVIPPAGYLKAVRELCTKHNVLMIADEVQSGLARSGKMLACDWEEIR 288

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PDMVILGKALGGGVIPVSAVLADK+VML I+PG+HGSTFGGNPLASAVA+ASLDVI +EK
Sbjct: 289 PDMVILGKALGGGVIPVSAVLADKDVMLHIKPGQHGSTFGGNPLASAVAMASLDVIEEEK 348

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDICLKMKE 240
           L ERSA LGEELR  L KI++QFP+++KEVRGRGLFNAVEFD  +L PVSAYDICL +KE
Sbjct: 349 LVERSASLGEELRIQLNKIKKQFPDHIKEVRGRGLFNAVEFDSKSLSPVSAYDICLSLKE 408

Query: 241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPKPADAPA---TPC 297
           RG+LAKPTH+TIVRLTPPLSISS+EL+EGSKAL DVLE+DLPK++K      P    T C
Sbjct: 409 RGVLAKPTHNTIVRLTPPLSISSDELREGSKALRDVLEVDLPKLQKINAGKTPVSHLTEC 468

Query: 298 HRCGRNLY 305
            RCGR+LY
Sbjct: 469 DRCGRSLY 476

Source: Brassica rapa

Species: Brassica rapa

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443914|ref|XP_002278418.1| PREDICTED: probable ornithine aminotransferase [Vitis vinifera] gi|297740745|emb|CBI30927.3| unnamed protein product [Vitis vinifera]

 Score =  499 bits (1285), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 245/307 (79%), Positives = 268/307 (87%), Gaps = 4/307 (1%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           QAIIVSCCGCFHGRTLA ISMSCDNEA RGFGPLLPGHLKVDFGD  ALEKIF+E+GD+I
Sbjct: 157 QAIIVSCCGCFHGRTLAVISMSCDNEATRGFGPLLPGHLKVDFGDEVALEKIFEENGDRI 216

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           AGFLFEPIQGEAGVIIPPDGYLKAVR+LCSK+NILMIADEIQSGL RSGRMLA DW EVR
Sbjct: 217 AGFLFEPIQGEAGVIIPPDGYLKAVRELCSKFNILMIADEIQSGLGRSGRMLACDWAEVR 276

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+VILGKALGGGVI VSAVLADK+VML IQPGEHGSTFGGNPLASAVA+ASLDVI +E 
Sbjct: 277 PDVVILGKALGGGVIAVSAVLADKDVMLSIQPGEHGSTFGGNPLASAVAVASLDVITEEG 336

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD-KTALPVSAYDICLKMKE 240
           L+ERS  +G+ELR  L KI Q FPN +KEVRG+GLFNAVE + K   PVSAYDICLK+KE
Sbjct: 337 LSERSDQMGQELRNQLMKIHQLFPNLIKEVRGKGLFNAVELNSKVLFPVSAYDICLKLKE 396

Query: 241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPKPADAPATP---C 297
           RG+LAKPTHDTI+RLTPPLSIS +ELQEGS AL DV+E D+PKM+K K    P T    C
Sbjct: 397 RGVLAKPTHDTIIRLTPPLSISLDELQEGSNALRDVMEFDVPKMQKAKHKRVPQTTTNIC 456

Query: 298 HRCGRNL 304
            RCGRN+
Sbjct: 457 DRCGRNM 463

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	306
TAIR|locus:2161398	475	DELTA-OAT "AT5G46180" [Arabido	0.993	0.64	0.792	9.3e-130
UNIPROTKB|Q10G56	473	OAT "Ornithine aminotransferas	0.993	0.642	0.724	2e-120
DICTYBASE|DDB_G0287913	416	oatA "ornithine-oxo-acid trans	0.859	0.632	0.543	1.6e-79
CGD|CAL0000636	436	CAR2 [Candida albicans (taxid:	0.928	0.651	0.501	4.6e-73
UNIPROTKB|Q59US9	436	CAR2 "Putative uncharacterized	0.928	0.651	0.501	4.6e-73
UNIPROTKB|P38021	401	rocD "Ornithine aminotransfera	0.866	0.660	0.518	6.1e-71
FB|FBgn0022774	431	Oat "Ornithine aminotransferas	0.846	0.600	0.505	4.3e-70
UNIPROTKB|E1BRW0	441	OAT "Uncharacterized protein"	0.885	0.614	0.509	3.8e-69
UNIPROTKB|F1NMV3	438	OAT "Uncharacterized protein"	0.879	0.614	0.510	4.9e-69
MGI|MGI:97394	439	Oat "ornithine aminotransferas	0.882	0.615	0.503	4.9e-69

TAIR|locus:2161398 DELTA-OAT "AT5G46180" [Arabidopsis thaliana (taxid:3702)]

 Score = 1273 (453.2 bits), Expect = 9.3e-130, P = 9.3e-130
 Identities = 244/308 (79%), Positives = 276/308 (89%)

Query:     2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
             +AIIVSCCGCFHGRTLA +SMSCDN+A RGFGPLLPG+LKVDFGD  +LEKIFKE GD+I
Sbjct:   167 EAIIVSCCGCFHGRTLAIVSMSCDNDATRGFGPLLPGNLKVDFGDADSLEKIFKEKGDRI 226

Query:    62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
             AGFLFEPIQGEAGVIIPPDGYLKAVR+LC+KYN+LMIADE+QSGLARSG+MLA DWEE+R
Sbjct:   227 AGFLFEPIQGEAGVIIPPDGYLKAVRELCTKYNVLMIADEVQSGLARSGKMLACDWEEIR 286

Query:   122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
             PDMVILGKALGGGVIPVSAVLADK+VML I+PG+HGSTFGGNPLASAVA+ASLDVI +EK
Sbjct:   287 PDMVILGKALGGGVIPVSAVLADKDVMLHIKPGQHGSTFGGNPLASAVAMASLDVIVEEK 346

Query:   182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDICLKMKE 240
             L ERSA LGEELR  L +I++QFP Y+KEVRGRGLFNA+EF+  +L PVSAYDICL +KE
Sbjct:   347 LVERSASLGEELRIQLNEIKKQFPKYIKEVRGRGLFNAIEFNSESLSPVSAYDICLSLKE 406

Query:   241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPKPADAPA---TPC 297
             RG+LAKPTH+TIVRLTPPLSISS+EL++GS+ALHDVLELDLP + K      P    T C
Sbjct:   407 RGVLAKPTHNTIVRLTPPLSISSDELRDGSEALHDVLELDLPNLLKINSGKTPVSHITEC 466

Query:   298 HRCGRNLY 305
              RCGRNLY
Sbjct:   467 DRCGRNLY 474

GO:0004587 "ornithine-oxo-acid transaminase activity" evidence=ISS;IDA;IMP

GO:0005737 "cytoplasm" evidence=ISM

GO:0005739 "mitochondrion" evidence=IDA

GO:0006561 "proline biosynthetic process" evidence=IDA;IMP

GO:0006593 "ornithine catabolic process" evidence=IDA;IMP

GO:0019544 "arginine catabolic process to glutamate" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IDA

GO:0009626 "plant-type hypersensitive response" evidence=TAS

GO:0009816 "defense response to bacterium, incompatible interaction" evidence=IEP

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0007031 "peroxisome organization" evidence=RCA

GO:0010260 "organ senescence" evidence=RCA

GO:0009651 "response to salt stress" evidence=IDA

GO:0042538 "hyperosmotic salinity response" evidence=IDA

UNIPROTKB|Q10G56 OAT "Ornithine aminotransferase, mitochondrial" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 1185 (422.2 bits), Expect = 2.0e-120, P = 2.0e-120
 Identities = 223/308 (72%), Positives = 261/308 (84%)

Query:     2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
             +A+IVSCCGCFHGRTL  ISMSCDN+A RGFGPL+PGHLKVDFGD   LEKIFK+ G++I
Sbjct:   166 EALIVSCCGCFHGRTLGVISMSCDNDATRGFGPLVPGHLKVDFGDTDGLEKIFKDHGERI 225

Query:    62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
              GFLFEPIQGEAGVIIPPDGYLKAVRDLCS++NILMIADEIQ+G+AR+G+MLA DWE +R
Sbjct:   226 CGFLFEPIQGEAGVIIPPDGYLKAVRDLCSRHNILMIADEIQTGIARTGKMLACDWENIR 285

Query:   122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
             PD+VILGKALG GV+PVSAVLADK++MLCI+PGEHGSTFGGNPLASAVA+ASL V+ DE 
Sbjct:   286 PDVVILGKALGAGVVPVSAVLADKDIMLCIKPGEHGSTFGGNPLASAVAVASLKVVTDEG 345

Query:   182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDICLKMKE 240
             L ER+A LG+E R  L K+QQ+FP  ++EVRGRGL NAV+    AL P SAYDIC+K+KE
Sbjct:   346 LVERAAKLGQEFRDQLQKVQQRFPQIIREVRGRGLLNAVDLSNEALSPASAYDICIKLKE 405

Query:   241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKP-KPADAPATP--C 297
             RG+LAKPTHDTI+RL PPLSIS  EL E SKA  DVLE DLP+++K  K  ++ A    C
Sbjct:   406 RGVLAKPTHDTIIRLAPPLSISPEELAEASKAFSDVLEHDLPQLQKQIKKTESAAEKQSC 465

Query:   298 HRCGRNLY 305
              RCGR+LY
Sbjct:   466 DRCGRDLY 473

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0009408 "response to heat" evidence=IEP

GO:0009413 "response to flooding" evidence=IEP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0009651 "response to salt stress" evidence=IEP

GO:0009733 "response to auxin stimulus" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009741 "response to brassinosteroid stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

DICTYBASE|DDB_G0287913 oatA "ornithine-oxo-acid transaminase" [Dictyostelium discoideum (taxid:44689)]

 Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
 Identities = 145/267 (54%), Positives = 200/267 (74%)

Query:     2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
             QAI++SC GCFHGRT+  ISMS D  +   +GPL+ G +K+D+     LE++  +  D++
Sbjct:   140 QAIVISCKGCFHGRTIGVISMSDDPSSYNKYGPLMNGIIKIDYNSTQQLEEVLSQHADRV 199

Query:    62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
              GF+ EPIQGEAGV++P +GYLK   +LC KYN+L++ADEIQ+GL R+GRML SDW+ ++
Sbjct:   200 CGFIVEPIQGEAGVVVPDEGYLKKCYELCKKYNVLLVADEIQTGLCRTGRMLCSDWDGIK 259

Query:   122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
             PD+V+LGKA+ GG++P+SAVL  K+VML I+PGEHGST+GG+PLASAVA+A+LDV+RDE 
Sbjct:   260 PDLVLLGKAISGGLLPISAVLGGKDVMLTIKPGEHGSTYGGSPLASAVAMAALDVLRDEN 319

Query:   182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
             LAE +  LGE  R  +  I    P  ++ VRG+GL NA+  D     VSA+DIC+K  E 
Sbjct:   320 LAENAQKLGEHFRAQISNINH--PA-IQLVRGKGLLNAIVIDPN-FTVSAWDICIKFAEN 375

Query:   242 GILAKPTHDTIVRLTPPLSISSNELQE 268
             G+LAKPTHD I+RL PPL+I+  ++ +
Sbjct:   376 GLLAKPTHDNIIRLAPPLTITLEQIDQ 402

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0008483 "transaminase activity" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0004587 "ornithine-oxo-acid transaminase activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006591 "ornithine metabolic process" evidence=IC

GO:0006527 "arginine catabolic process" evidence=ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0055129 "L-proline biosynthetic process" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

CGD|CAL0000636 CAR2 [Candida albicans (taxid:5476)]

 Score = 738 (264.8 bits), Expect = 4.6e-73, P = 4.6e-73
 Identities = 149/297 (50%), Positives = 210/297 (70%)

Query:     2 QAIIVSCCGCFHGRTLAAISMSCDNEA-------IRGFGPLLPGHLK---VDFGDITALE 51
             +AII+S    FHGRTL  ISMS D +A       +RG GP +PG  +   + +G I  +E
Sbjct:   138 EAIILSAVNNFHGRTLGVISMSTDPDATTNFGPYLRGVGPQIPGEPEGTLLRYGVIEDVE 197

Query:    52 KIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR 111
             K F  +GD+IA  L EPIQGEAG+++PP+ YL  V++LC K+N+L+I DEIQ+G+AR+G+
Sbjct:   198 KAFANAGDKIAAILLEPIQGEAGIVVPPEDYLPRVQELCKKHNVLLICDEIQTGIARTGK 257

Query:   112 MLASDWEE-VRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVA 170
             ML  +  + V+PD+V+LGKA+ GGV+PVSAVL+ KEVM  ++PG HGST+GGNPLA  VA
Sbjct:   258 MLCYEHSKGVKPDIVLLGKAISGGVMPVSAVLSSKEVMSTLEPGSHGSTYGGNPLACRVA 317

Query:   171 IASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPV- 229
             IA+LDV+RDE L ER+  LG  LR+ L ++Q++    + EVRG+GL +A+  D++     
Sbjct:   318 IAALDVVRDENLVERAQKLGALLREKLEELQKESNGMISEVRGKGLLSAIVIDESKTNGR 377

Query:   230 SAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRK 286
             +A+D+CL MK  G+LAKPTHD I+RL PPL IS  +L +G  ++   L+ +LP + K
Sbjct:   378 TAWDLCLLMKNHGVLAKPTHDNIIRLAPPLVISEEDLLKGVDSIRKSLK-ELPNVAK 433

GO:0035690 "cellular response to drug" evidence=IDA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0004587 "ornithine-oxo-acid transaminase activity" evidence=IEA

GO:0006591 "ornithine metabolic process" evidence=IEA

GO:0006527 "arginine catabolic process" evidence=IEA

UNIPROTKB|Q59US9 CAR2 "Putative uncharacterized protein CAR2" [Candida albicans SC5314 (taxid:237561)]

 Score = 738 (264.8 bits), Expect = 4.6e-73, P = 4.6e-73
 Identities = 149/297 (50%), Positives = 210/297 (70%)

Query:     2 QAIIVSCCGCFHGRTLAAISMSCDNEA-------IRGFGPLLPGHLK---VDFGDITALE 51
             +AII+S    FHGRTL  ISMS D +A       +RG GP +PG  +   + +G I  +E
Sbjct:   138 EAIILSAVNNFHGRTLGVISMSTDPDATTNFGPYLRGVGPQIPGEPEGTLLRYGVIEDVE 197

Query:    52 KIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR 111
             K F  +GD+IA  L EPIQGEAG+++PP+ YL  V++LC K+N+L+I DEIQ+G+AR+G+
Sbjct:   198 KAFANAGDKIAAILLEPIQGEAGIVVPPEDYLPRVQELCKKHNVLLICDEIQTGIARTGK 257

Query:   112 MLASDWEE-VRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVA 170
             ML  +  + V+PD+V+LGKA+ GGV+PVSAVL+ KEVM  ++PG HGST+GGNPLA  VA
Sbjct:   258 MLCYEHSKGVKPDIVLLGKAISGGVMPVSAVLSSKEVMSTLEPGSHGSTYGGNPLACRVA 317

Query:   171 IASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPV- 229
             IA+LDV+RDE L ER+  LG  LR+ L ++Q++    + EVRG+GL +A+  D++     
Sbjct:   318 IAALDVVRDENLVERAQKLGALLREKLEELQKESNGMISEVRGKGLLSAIVIDESKTNGR 377

Query:   230 SAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRK 286
             +A+D+CL MK  G+LAKPTHD I+RL PPL IS  +L +G  ++   L+ +LP + K
Sbjct:   378 TAWDLCLLMKNHGVLAKPTHDNIIRLAPPLVISEEDLLKGVDSIRKSLK-ELPNVAK 433

GO:0035690 "cellular response to drug" evidence=IDA

UNIPROTKB|P38021 rocD "Ornithine aminotransferase" [Bacillus subtilis subsp. subtilis str. 168 (taxid:224308)]

 Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
 Identities = 143/276 (51%), Positives = 188/276 (68%)

Query:     2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
             QA I++C G FHGRT+ A+S+S + E  RGFGP+LPG   + +GD+ AL +    +    
Sbjct:   134 QAEIIACVGNFHGRTMLAVSLSSEEEYKRGFGPMLPGIKLIPYGDVEALRQAITPN---T 190

Query:    62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
             A FLFEPIQGEAG++IPP+G+L+    +C + N+L IADEIQ+GL R+G+  A DW+ + 
Sbjct:   191 AAFLFEPIQGEAGIVIPPEGFLQEAAAICKEENVLFIADEIQTGLGRTGKTFACDWDGIV 250

Query:   122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
             PDM ILGKALGGGV P+S + AD+E++    PG HGSTFGGNPLA AV+IASL+V+ DEK
Sbjct:   251 PDMYILGKALGGGVFPISCIAADREILGVFNPGSHGSTFGGNPLACAVSIASLEVLEDEK 310

Query:   182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
             LA+RS  LGE  +  L  I    P  +KEVRGRGLF  VE  + A P   Y  C ++KE 
Sbjct:   311 LADRSLELGEYFKSELESIDS--P-VIKEVRGRGLFIGVELTEAARP---Y--CERLKEE 362

Query:   242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
             G+L K THDT++R  PPL IS  +L    + +  VL
Sbjct:   363 GLLCKETHDTVIRFAPPLIISKEDLDWAIEKIKHVL 398

GO:0004587 "ornithine-oxo-acid transaminase activity" evidence=IDA

GO:0006525 "arginine metabolic process" evidence=IDA

FB|FBgn0022774 Oat "Ornithine aminotransferase precursor" [Drosophila melanogaster (taxid:7227)]

 Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
 Identities = 135/267 (50%), Positives = 197/267 (73%)

Query:     2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
             QA I+     F GRTL+A+S S D  +  GFGP +PG   +++ +++ALE+  K+    +
Sbjct:   161 QAKIIFARNNFWGRTLSAVSASNDPSSYEGFGPFMPGFELIEYDNVSALEESLKDPN--V 218

Query:    62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
               F+ EPIQGEAGV++P DGYLK VR+LC+KYN+L IADE+Q+GLAR+G++LA D+E+V+
Sbjct:   219 CAFMVEPIQGEAGVVVPSDGYLKKVRELCTKYNVLWIADEVQTGLARTGKLLAVDYEQVQ 278

Query:   122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
             PD++ILGKAL GG+ PVSAVL + +VMLCI+PGEHGST+GGNPL   VA+A+L+V+++EK
Sbjct:   279 PDILILGKALSGGMYPVSAVLCNDQVMLCIKPGEHGSTYGGNPLGCRVAMAALEVLQEEK 338

Query:   182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
             LAE +  +G+ LR  L  + +   + V  VRG+GL NA+  ++      A+++CL++KE 
Sbjct:   339 LAENAFKMGDLLRNELSTLPK---DVVSVVRGKGLLNAIVINQK---FDAWEVCLRLKEN 392

Query:   242 GILAKPTHDTIVRLTPPLSISSNELQE 268
             G+LAKPTH  I+R  PPL I+  +++E
Sbjct:   393 GLLAKPTHGDIIRFAPPLVINETQMRE 419

GO:0005759 "mitochondrial matrix" evidence=ISS;NAS

GO:0005739 "mitochondrion" evidence=IDA

GO:0004587 "ornithine-oxo-acid transaminase activity" evidence=ISS;NAS

GO:0006591 "ornithine metabolic process" evidence=ISS;NAS

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|E1BRW0 OAT "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
 Identities = 141/277 (50%), Positives = 190/277 (68%)

Query:     2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
             +A I+   G F GRT++AIS S D  +  GFGP +PG   + + D+ ALE+  ++    +
Sbjct:   167 KAKIIFAAGNFWGRTMSAISSSTDPSSYDGFGPFMPGFELIPYNDLPALERALQDPN--V 224

Query:    62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
             A F+ EPIQGEAGVI+P  GYL  VRDLC+K+N+L IADEIQ+GLAR+G+MLA D E VR
Sbjct:   225 AAFMVEPIQGEAGVIVPDKGYLTGVRDLCTKHNVLFIADEIQTGLARTGKMLAVDHENVR 284

Query:   122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
             PD+++LGKAL GG+ PVSAVL D EVML I+PGEHGST+GGNPLA  VA+A+L+VI +E 
Sbjct:   285 PDIILLGKALSGGLYPVSAVLCDDEVMLTIKPGEHGSTYGGNPLACRVALAALEVIEEEG 344

Query:   182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPV-SAYDICLKMKE 240
             L + +  +G  LR  L K        V  VRGRGL NA+   K       A+ +CL++++
Sbjct:   345 LVKNAEIMGNILRNELMKTPSDI---VTCVRGRGLLNAIVIRKPKPQYYDAWKVCLRLRD 401

Query:   241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
              G+LAKPTH  I+RL PPL I  +E++E  + +H  +
Sbjct:   402 NGLLAKPTHGDIIRLAPPLVIKEDEIRECIEIIHKTI 438

GO:0008483 "transaminase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

UNIPROTKB|F1NMV3 OAT "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
 Identities = 141/276 (51%), Positives = 191/276 (69%)

Query:     2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
             +A I+   G F GRT++AIS S D  +  GFGP +PG   + + D+ ALE+  ++    +
Sbjct:   167 KAKIIFAAGNFWGRTMSAISSSTDPSSYDGFGPFMPGFELIPYNDLPALERALQDPN--V 224

Query:    62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
             A F+ EPIQGEAGVI+P  GYL  VRDLC+K+N+L IADEIQ+GLAR+G+MLA D E VR
Sbjct:   225 AAFMVEPIQGEAGVIVPDKGYLTGVRDLCTKHNVLFIADEIQTGLARTGKMLAVDHENVR 284

Query:   122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
             PD+++LGKAL GG+ PVSAVL D EVML I+PGEHGST+GGNPLA  VA+A+L+VI +E 
Sbjct:   285 PDIILLGKALSGGLYPVSAVLCDDEVMLTIKPGEHGSTYGGNPLACRVALAALEVIEEEG 344

Query:   182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
             L + +  +G  LR  L K        V  VRGRGL NA+   +T     A+ +CL++++ 
Sbjct:   345 LVKNAEIMGNILRNELMKTPSDI---VTCVRGRGLLNAIVI-RTK-DYDAWKVCLRLRDN 399

Query:   242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
             G+LAKPTH  I+RL PPL I  +E++E  + +H  +
Sbjct:   400 GLLAKPTHGDIIRLAPPLVIKEDEIRECIEIIHKTI 435

GO:0008483 "transaminase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

MGI|MGI:97394 Oat "ornithine aminotransferase" [Mus musculus (taxid:10090)]

 Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
 Identities = 139/276 (50%), Positives = 192/276 (69%)

Query:     2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
             +A IV   G F GRTL+AIS S D  +  GFGP +PG   + + D+ ALE+  ++    +
Sbjct:   167 KAKIVFADGNFWGRTLSAISSSTDPTSYDGFGPFMPGFETIPYNDLPALERALQDPN--V 224

Query:    62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
             A F+ EPIQGEAGVI+P  GYL  VR+LC+++ +L IADEIQ+GLAR+GR LA D E VR
Sbjct:   225 AAFMVEPIQGEAGVIVPDPGYLTGVRELCTRHQVLFIADEIQTGLARTGRWLAVDHENVR 284

Query:   122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
             PDMV+LGKAL GG+ PVSAVL D E+ML I+PGEHGST+GGNPL   +AIA+L+V+ +E 
Sbjct:   285 PDMVLLGKALSGGLYPVSAVLCDDEIMLTIKPGEHGSTYGGNPLGCRIAIAALEVLEEEN 344

Query:   182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
             LAE +  +G  LR+ L K+     + V  VRG+GL NA+   +T     A+ +CL++++ 
Sbjct:   345 LAENADKMGAILRKELMKLPS---DVVTSVRGKGLLNAIVIRETK-DCDAWKVCLRLRDN 400

Query:   242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
             G+LAKPTH  I+RL PPL I  +E++E  + ++  +
Sbjct:   401 GLLAKPTHGDIIRLAPPLVIKEDEIRESVEIINKTI 436

GO:0003824 "catalytic activity" evidence=IEA

GO:0004587 "ornithine-oxo-acid transaminase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0008483 "transaminase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0034214 "protein hexamerization" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6GID1	OAT2_STAAR	2, ., 6, ., 1, ., 1, 3	0.5306	0.8692	0.6717	yes	no
C5D6R2	OAT_GEOSW	2, ., 6, ., 1, ., 1, 3	0.5471	0.8300	0.6381	yes	no
P60299	OAT2_STAAW	2, ., 6, ., 1, ., 1, 3	0.5342	0.8692	0.6717	yes	no
B9DIU0	OAT_STACT	2, ., 6, ., 1, ., 1, 3	0.5326	0.8660	0.6691	yes	no
Q9FNK4	OAT_ARATH	2, ., 6, ., 1, ., 1, 3	0.7896	0.9967	0.6421	yes	no
Q8CT82	OAT_STAES	2, ., 6, ., 1, ., 1, 3	0.5396	0.8300	0.6414	yes	no
Q5HHC8	OAT2_STAAC	2, ., 6, ., 1, ., 1, 3	0.5342	0.8692	0.6717	yes	no
C4L2E7	OAT_EXISA	2, ., 6, ., 1, ., 1, 3	0.5326	0.8660	0.6625	yes	no
Q54JP5	OAT_DICDI	2, ., 6, ., 1, ., 1, 3	0.5234	0.8921	0.6562	yes	no
B9EAM9	OAT_MACCJ	2, ., 6, ., 1, ., 1, 3	0.5584	0.8300	0.6397	yes	no
Q8EP32	OAT_OCEIH	2, ., 6, ., 1, ., 1, 3	0.5036	0.8660	0.6658	yes	no
P38021	OAT_BACSU	2, ., 6, ., 1, ., 1, 3	0.5108	0.8660	0.6608	yes	no
Q6GAW9	OAT2_STAAS	2, ., 6, ., 1, ., 1, 3	0.5342	0.8692	0.6717	yes	no
Q9VW26	OAT_DROME	2, ., 6, ., 1, ., 1, 3	0.5056	0.8464	0.6009	yes	no
Q49W96	OAT2_STAS1	2, ., 6, ., 1, ., 1, 3	0.5270	0.8692	0.6717	yes	no
P60298	OAT2_STAAN	2, ., 6, ., 1, ., 1, 3	0.5342	0.8692	0.6717	yes	no
Q5HQK4	OAT_STAEQ	2, ., 6, ., 1, ., 1, 3	0.5396	0.8300	0.6414	yes	no
Q10G56	OAT_ORYSJ	2, ., 6, ., 1, ., 1, 3	0.7207	0.9934	0.6427	yes	no
Q9K5Z2	OAT_BACHD	2, ., 6, ., 1, ., 1, 3	0.5018	0.8692	0.6683	yes	no
P60297	OAT2_STAAM	2, ., 6, ., 1, ., 1, 3	0.5342	0.8692	0.6717	yes	no
P29758	OAT_MOUSE	2, ., 6, ., 1, ., 1, 3	0.5036	0.8823	0.6150	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.6.1	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	DELTA-OAT	delta-OAT; ornithine-oxo-acid transaminase; ornithine delta-aminotransferase (475 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	OTC	OTC (ORNITHINE CARBAMOYLTRANSFERASE); amino acid binding / carboxyl- or carbamoyltransferase/ o [...] (375 aa)	•			•		•	•		0.993
	AT2G37500	arginine biosynthesis protein ArgJ family; arginine biosynthesis protein ArgJ family; FUNCTIONS [...] (468 aa)	•					•	•		0.986
	AT4G08900	arginase; Encodes an arginase, likely to be involved in polyamine biosynthesis in pollen. (342 aa)	•					•	•		0.966
	AT2G19940	N-acetyl-gamma-glutamyl-phosphate reductase/ NAD or NADH binding / binding / catalytic/ oxidore [...] (401 aa)	•			•		•	•		0.950
	ALDH12A1	ALDH12A1; 1-pyrroline-5-carboxylate dehydrogenase/ 3-chloroallyl aldehyde dehydrogenase; Encode [...] (556 aa)				•		•	•		0.931
	AT4G17830	peptidase M20/M25/M40 family protein; peptidase M20/M25/M40 family protein; FUNCTIONS IN- metal [...] (440 aa)				•		•			0.909
	AT4G24830	arginosuccinate synthase family; arginosuccinate synthase family; FUNCTIONS IN- argininosuccina [...] (494 aa)	•			•			•		0.908
	AT4G38220	aminoacylase, putative / N-acyl-L-amino-acid amidohydrolase, putative; aminoacylase, putative / [...] (433 aa)						•			0.899
	AT3G57560	aspartate/glutamate/uridylate kinase family protein; encodes a N-acetylglutamate kinase, involv [...] (347 aa)	•					•	•		0.897
	AT5G10920	argininosuccinate lyase, putative / arginosuccinase, putative; argininosuccinate lyase, putativ [...] (517 aa)	•			•		•	•		0.853

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	306
PLN02624	474	PLN02624, PLN02624, ornithine-delta-aminotransfera	0.0
TIGR01885	401	TIGR01885, Orn_aminotrans, ornithine aminotransfer	1e-159
PTZ00125	400	PTZ00125, PTZ00125, ornithine aminotransferase-lik	1e-133
PRK04073	396	PRK04073, rocD, ornithine--oxo-acid transaminase;	1e-122
COG4992	404	COG4992, ArgD, Ornithine/acetylornithine aminotran	1e-118
cd00610	413	cd00610, OAT_like, Acetyl ornithine aminotransfera	1e-111
PRK02627	396	PRK02627, PRK02627, acetylornithine aminotransfera	3e-97
PRK00854	401	PRK00854, rocD, ornithine--oxo-acid transaminase;	6e-96
COG0160	447	COG0160, GabT, 4-aminobutyrate aminotransferase an	6e-89
pfam00202	338	pfam00202, Aminotran_3, Aminotransferase class-III	1e-87
TIGR00707	379	TIGR00707, argD, transaminase, acetylornithine/suc	1e-79
PRK11522	459	PRK11522, PRK11522, putrescine--2-oxoglutarate ami	4e-78
PRK01278	389	PRK01278, argD, acetylornithine transaminase prote	2e-74
PRK05769	441	PRK05769, PRK05769, 4-aminobutyrate aminotransfera	4e-72
COG0161	449	COG0161, BioA, Adenosylmethionine-8-amino-7-oxonon	5e-72
PRK03244	398	PRK03244, argD, acetylornithine aminotransferase;	2e-71
TIGR00508	417	TIGR00508, bioA, adenosylmethionine-8-amino-7-oxon	7e-71
TIGR03372	442	TIGR03372, putres_am_tran, putrescine aminotransfe	1e-68
PRK02936	377	PRK02936, argD, acetylornithine aminotransferase;	1e-63
PRK08117	433	PRK08117, PRK08117, 4-aminobutyrate aminotransfera	6e-63
PRK07495	425	PRK07495, PRK07495, 4-aminobutyrate aminotransfera	1e-59
PRK05093	403	PRK05093, argD, bifunctional N-succinyldiaminopime	3e-57
TIGR00700	420	TIGR00700, GABAtrnsam, 4-aminobutyrate aminotransf	4e-57
PLN00144	382	PLN00144, PLN00144, acetylornithine transaminase	2e-55
PRK08593	445	PRK08593, PRK08593, 4-aminobutyrate aminotransfera	7e-55
PRK06777	421	PRK06777, PRK06777, 4-aminobutyrate aminotransfera	1e-54
PRK04612	408	PRK04612, argD, acetylornithine transaminase prote	4e-54
PRK06918	451	PRK06918, PRK06918, 4-aminobutyrate aminotransfera	2e-53
PRK04013	364	PRK04013, argD, acetylornithine/acetyl-lysine amin	3e-53
PRK06058	443	PRK06058, PRK06058, 4-aminobutyrate aminotransfera	3e-53
TIGR03246	397	TIGR03246, arg_catab_astC, succinylornithine trans	7e-52
PRK06917	447	PRK06917, PRK06917, hypothetical protein; Provisio	1e-51
PRK05964	423	PRK05964, PRK05964, adenosylmethionine--8-amino-7-	8e-50
PRK08360	443	PRK08360, PRK08360, 4-aminobutyrate aminotransfera	9e-50
PRK09792	421	PRK09792, PRK09792, 4-aminobutyrate transaminase;	4e-49
PRK06916	460	PRK06916, PRK06916, adenosylmethionine--8-amino-7-	4e-49
PRK07481	449	PRK07481, PRK07481, hypothetical protein; Provisio	3e-47
PRK06082	459	PRK06082, PRK06082, 4-aminobutyrate aminotransfera	2e-46
PRK06062	451	PRK06062, PRK06062, hypothetical protein; Provisio	7e-46
PRK07678	451	PRK07678, PRK07678, aminotransferase; Validated	7e-46
PRK03715	395	PRK03715, argD, acetylornithine transaminase prote	8e-46
PRK04260	375	PRK04260, PRK04260, acetylornithine aminotransfera	8e-46
PRK06938	464	PRK06938, PRK06938, diaminobutyrate--2-oxoglutarat	2e-45
PRK07483	443	PRK07483, PRK07483, hypothetical protein; Provisio	7e-45
PRK13360	442	PRK13360, PRK13360, omega amino acid--pyruvate tra	2e-44
PRK09221	445	PRK09221, PRK09221, beta alanine--pyruvate transam	2e-44
TIGR00709	442	TIGR00709, dat, 2,4-diaminobutyrate 4-transaminase	4e-44
PRK12381	406	PRK12381, PRK12381, bifunctional succinylornithine	9e-44
PRK08088	425	PRK08088, PRK08088, 4-aminobutyrate aminotransfera	9e-44
PRK09264	425	PRK09264, PRK09264, diaminobutyrate--2-oxoglutarat	2e-43
PRK06931	459	PRK06931, PRK06931, diaminobutyrate--2-oxoglutarat	3e-43
TIGR02407	412	TIGR02407, ectoine_ectB, diaminobutyrate--2-oxoglu	2e-42
PRK05639	457	PRK05639, PRK05639, 4-aminobutyrate aminotransfera	6e-42
PRK07986	428	PRK07986, PRK07986, adenosylmethionine--8-amino-7-	1e-41
PRK07480	456	PRK07480, PRK07480, putative aminotransferase; Val	2e-41
COG0001	432	COG0001, HemL, Glutamate-1-semialdehyde aminotrans	2e-40
PRK06148	1013	PRK06148, PRK06148, hypothetical protein; Provisio	2e-39
PRK06105	460	PRK06105, PRK06105, aminotransferase; Provisional	5e-39
PRK06173	429	PRK06173, PRK06173, adenosylmethionine--8-amino-7-	1e-38
PRK07036	466	PRK07036, PRK07036, hypothetical protein; Provisio	1e-37
PRK06541	460	PRK06541, PRK06541, hypothetical protein; Provisio	1e-36
PRK07482	461	PRK07482, PRK07482, hypothetical protein; Provisio	8e-36
PLN02760	504	PLN02760, PLN02760, 4-aminobutyrate:pyruvate trans	1e-35
PRK08297	443	PRK08297, PRK08297, L-lysine aminotransferase; Pro	7e-35
TIGR03251	431	TIGR03251, LAT_fam, L-lysine 6-transaminase	2e-34
PRK00062	426	PRK00062, PRK00062, glutamate-1-semialdehyde amino	3e-34
TIGR00713	423	TIGR00713, hemL, glutamate-1-semialdehyde-2,1-amin	4e-34
PRK05965	459	PRK05965, PRK05965, hypothetical protein; Provisio	6e-34
PRK12403	460	PRK12403, PRK12403, putative aminotransferase; Pro	1e-32
PRK07030	466	PRK07030, PRK07030, adenosylmethionine--8-amino-7-	7e-29
PRK06149	972	PRK06149, PRK06149, hypothetical protein; Provisio	3e-28
PRK08742	472	PRK08742, PRK08742, adenosylmethionine--8-amino-7-	9e-27
PRK05630	422	PRK05630, PRK05630, adenosylmethionine--8-amino-7-	1e-25
PRK06943	453	PRK06943, PRK06943, adenosylmethionine--8-amino-7-	1e-25
PRK00615	433	PRK00615, PRK00615, glutamate-1-semialdehyde amino	9e-25
PRK12389	428	PRK12389, PRK12389, glutamate-1-semialdehyde amino	2e-22
TIGR00699	464	TIGR00699, GABAtrns_euk, 4-aminobutyrate aminotran	2e-20
PLN02482	474	PLN02482, PLN02482, glutamate-1-semialdehyde 2,1-a	2e-19
PRK06209	431	PRK06209, PRK06209, glutamate-1-semialdehyde 2,1-a	4e-16
PRK07046	453	PRK07046, PRK07046, aminotransferase; Validated	2e-15
PLN02974	817	PLN02974, PLN02974, adenosylmethionine-8-amino-7-o	7e-10
cd01494	170	cd01494, AAT_I, Aspartate aminotransferase (AAT) s	7e-07
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	3e-06
COG0156	388	COG0156, BioF, 7-keto-8-aminopelargonate synthetas	2e-05
cd00609	350	cd00609, AAT_like, Aspartate aminotransferase fami	3e-04
PRK05958	385	PRK05958, PRK05958, 8-amino-7-oxononanoate synthas	4e-04

>gnl|CDD|215335 PLN02624, PLN02624, ornithine-delta-aminotransferase

 Score =  580 bits (1498), Expect = 0.0
 Identities = 244/309 (78%), Positives = 273/309 (88%), Gaps = 4/309 (1%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +AIIVSCCGCFHGRTLAAISMSCDNEA RGFGPLLPGHLKVDFGD+ ALEKIF+E GD+I
Sbjct: 166 EAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRI 225

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           A FLFEPIQGEAGV+IPPDGYLKAVR+LCSK+N+LMIADEIQ+GLAR+G+MLA DWEEVR
Sbjct: 226 AAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVR 285

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+VILGKALGGGVIPVSAVLADK+VMLCI+PGEHGSTFGGNPLASAVA+A+L V++DEK
Sbjct: 286 PDVVILGKALGGGVIPVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEK 345

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDICLKMKE 240
           LAERSA LG+ELR  L KIQ+QFP  +KEVRGRGL NAV  +   L PVSAYD+CLK+KE
Sbjct: 346 LAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKE 405

Query: 241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPKPADAPA---TPC 297
           RG+LAKPTHDTI+RL PPLSIS +ELQE SKAL DVLE DLPK++  K    P    TPC
Sbjct: 406 RGLLAKPTHDTIIRLAPPLSISEDELQECSKALSDVLEHDLPKLQSAKKEKTPKAAPTPC 465

Query: 298 HRCGRNLYG 306
            RCGRNLY 
Sbjct: 466 DRCGRNLYA 474

Length = 474

>gnl|CDD|130940 TIGR01885, Orn_aminotrans, ornithine aminotransferase

 Score =  450 bits (1159), Expect = e-159
 Identities = 154/277 (55%), Positives = 207/277 (74%), Gaps = 3/277 (1%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           QAIIVS  G FHGRTL AISMS D ++   FGP +PG  K+ + ++ ALE+  ++ G  +
Sbjct: 128 QAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYNNLEALEEALEDHGPNV 187

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
             F+ EPIQGEAGV++P DGYLK VR+LC+K+N+L+IADEIQ+GL R+G++L  D E V+
Sbjct: 188 CAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVK 247

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+V+LGKAL GGV PVSAVLAD +VML I+PGEHGST+GGNPLA AVA+A+L+V+ +EK
Sbjct: 248 PDIVLLGKALSGGVYPVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEEK 307

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           LAE +  LGE  R  L K+       + EVRGRGL NA+  D++    +A+D+CLK+KE+
Sbjct: 308 LAENAEKLGEIFRDQLKKLP---KPIITEVRGRGLLNAIVIDESKTGRTAWDLCLKLKEK 364

Query: 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           G+LAKPTH  I+RL PPL I+  +L EG + +  V++
Sbjct: 365 GLLAKPTHGNIIRLAPPLVITEEQLDEGLEIIKKVID 401

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis (OMNI|PG1271), and the other from Staphylococcus aureus (OMNI|SA0170). After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis (SP|P38021). Length = 401

>gnl|CDD|240281 PTZ00125, PTZ00125, ornithine aminotransferase-like protein; Provisional

 Score =  384 bits (987), Expect = e-133
 Identities = 147/267 (55%), Positives = 196/267 (73%), Gaps = 4/267 (1%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           QA I+ C G F GRT+ A S S D +    FGP +PG   VD+ D+ ALEK+ +     +
Sbjct: 122 QAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQ--DPNV 179

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           A F+ EPIQGEAGVI+P DGYLK V +LC KYN+L+I DEIQ+GL R+G++LA D E V+
Sbjct: 180 AAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVK 239

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+V+LGKAL GG+ P+SAVLA+ +VML I+PGEHGST+GGNPLA AVA+ +L+V+++EK
Sbjct: 240 PDIVLLGKALSGGLYPISAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEK 299

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           LAE +  LGE  R  L K   +   +VKE+RG+GL NA+ FD +   V+A+D+CLK+KE 
Sbjct: 300 LAENAQRLGEVFRDGL-KELLKKSPWVKEIRGKGLLNAIVFDHSDG-VNAWDLCLKLKEN 357

Query: 242 GILAKPTHDTIVRLTPPLSISSNELQE 268
           G+LAKPTHD I+R  PPL I+  +L +
Sbjct: 358 GLLAKPTHDNIIRFAPPLVITKEQLDQ 384

Length = 400

>gnl|CDD|179736 PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional

 Score =  355 bits (913), Expect = e-122
 Identities = 143/277 (51%), Positives = 191/277 (68%), Gaps = 11/277 (3%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +A I++C G FHGRT+AA+S+S + E  RGFGP+LPG  K+ +GD+ AL+          
Sbjct: 131 KAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGDLEALKAAITP---NT 187

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           A FL EPIQGEAG+ IPP+G+LKA R+LC + N+L IADEIQ+GL R+G++ A DW+ V 
Sbjct: 188 AAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVT 247

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PDM ILGKALGGGV P+S V A+++++    PG HGSTFGGNPLA AV+IA+L+V+ +EK
Sbjct: 248 PDMYILGKALGGGVFPISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEEK 307

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           L ERS  LGE  ++ L +I    P  +KEVRGRGLF  VE ++ A P      C  +KE 
Sbjct: 308 LPERSLELGEYFKEQLKEI--DNPM-IKEVRGRGLFIGVELNEPARP-----YCEALKEE 359

Query: 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           G+L K TH+T++R  PPL I+  EL    + +  VL 
Sbjct: 360 GLLCKETHETVIRFAPPLVITKEELDWAFEKIKAVLS 396

Length = 396

>gnl|CDD|227325 COG4992, ArgD, Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

 Score =  344 bits (886), Expect = e-118
 Identities = 122/282 (43%), Positives = 171/282 (60%), Gaps = 8/282 (2%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           ++ I++    FHGRTL A+S +   +  +GFGPLLPG   V F DI ALE       +  
Sbjct: 129 KSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAI---DEDT 185

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           A  + EPIQGE GVI  P  +LKA+R+LC ++  L+I DE+Q+GL R+G++ A +   V 
Sbjct: 186 AAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVE 245

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD++ L KALGGG  P+ A+LA +E+     PG+HGSTFGGNPLA AVA+A L+V+ +E 
Sbjct: 246 PDILTLAKALGGGF-PIGAMLATEEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEG 304

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           L E     GE L Q L ++++++P  VKEVRGRGL   +E  +   P  A DI   ++E 
Sbjct: 305 LLENVREKGEYLLQRLRELKRRYPL-VKEVRGRGLMIGIELKE---PYRARDIVRALREE 360

Query: 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283
           G+L  P    ++R  PPL I+  E+ E   AL   L     +
Sbjct: 361 GVLVLPAGPNVIRFLPPLVITEEEIDEALDALERALAAASAR 402

Length = 404

>gnl|CDD|99735 cd00610, OAT_like, Acetyl ornithine aminotransferase family

 Score =  326 bits (839), Expect = e-111
 Identities = 131/291 (45%), Positives = 180/291 (61%), Gaps = 20/291 (6%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----------DITALEKI 53
           I+S  G +HGRTL A+S++   +   GFGPLLPG L V +            D+ ALE+ 
Sbjct: 125 IISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEA 184

Query: 54  FKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 113
            +E  +++A  + EPIQGE GVI+PP GYLKA+R+LC K+ IL+IADE+Q+G  R+G+M 
Sbjct: 185 LEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMF 244

Query: 114 ASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCI--QPGEHGSTFGGNPLASAVAI 171
           A +   V PD+V LGK LGGG+ P+ AVL  +E+M      PG HG TFGGNPLA A A+
Sbjct: 245 AFEHFGVEPDIVTLGKGLGGGL-PLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAAL 303

Query: 172 ASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD-----KTA 226
           A L+V+ +E L E +A LGE LR+ L ++ ++ P  V +VRGRGL   +E       K  
Sbjct: 304 AVLEVLEEEGLLENAAELGEYLRERLRELAEKHPL-VGDVRGRGLMIGIELVKDRATKPP 362

Query: 227 LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
               A  I     ERG+L +P+   ++RL PPL I+  E+ EG  AL + L
Sbjct: 363 DKELAAKIIKAALERGLLLRPSGGNVIRLLPPLIITEEEIDEGLDALDEAL 413

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation. Length = 413

>gnl|CDD|235056 PRK02627, PRK02627, acetylornithine aminotransferase; Provisional

 Score =  291 bits (748), Expect = 3e-97
 Identities = 117/276 (42%), Positives = 168/276 (60%), Gaps = 12/276 (4%)

Query: 4   IIVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLPGHLKVDFGDITALEKIFKESGDQIA 62
            I++    FHGRTLA +S +      + GF PL+ G + V F DI AL+       D+ A
Sbjct: 129 EIITAENSFHGRTLATLSAT-GQPKYQEGFEPLVEGFIYVPFNDIEALKAAI---TDKTA 184

Query: 63  GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRP 122
             + EPIQGE GV      YL+A+R+LC +  IL+I DE+Q+G+ R+G++ A     + P
Sbjct: 185 AVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEP 244

Query: 123 DMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKL 182
           D++ L K LGGGV P+ AVLA ++V     PG+HGSTFGGNPLA A A+A +++I +E L
Sbjct: 245 DIMTLAKGLGGGV-PIGAVLAKEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGL 303

Query: 183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG 242
            E +A +GE LR  L ++ +++P  +KEVRG GL   +E D+ A      +I  K  E+G
Sbjct: 304 LENAAEVGEYLRAKLRELLEKYPG-IKEVRGLGLMIGIELDRPAA-----EIVKKALEKG 357

Query: 243 ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           +L   T D ++RL PPL IS  E+ E    L +VL+
Sbjct: 358 LLINVTGDNVLRLLPPLIISKEEIDEAVDRLEEVLK 393

Length = 396

>gnl|CDD|234848 PRK00854, rocD, ornithine--oxo-acid transaminase; Reviewed

 Score =  288 bits (739), Expect = 6e-96
 Identities = 133/276 (48%), Positives = 174/276 (63%), Gaps = 8/276 (2%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           QA I+ C   FHGRTL+ +  S D +A  GFGP  PG   V FGD  ALE          
Sbjct: 132 QAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFGDAEALEAAITP---NT 188

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
             FL EPIQGEAGVIIPP GY   VR+LC+  N+ +I DEIQ+GL R+G++LA + E + 
Sbjct: 189 VAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIE 248

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
            D+ ++GKAL GG  PVSAVL++ EV+  ++PG+HGSTFGGNPLA AVA A+L V+ +E 
Sbjct: 249 ADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTEEG 308

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           + E +A +G    + L  I+    N V+EVRGRGL  AVE +  A     Y  C  +KER
Sbjct: 309 MIENAAEMGAYFLEGLRSIRS---NIVREVRGRGLMLAVELEPEAGGARQY--CEALKER 363

Query: 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           G+LAK THD  +RL PPL I+  ++    + +  VL
Sbjct: 364 GLLAKDTHDHTIRLAPPLVITREQVDWALEQIAKVL 399

Length = 401

>gnl|CDD|223238 COG0160, GabT, 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

 Score =  272 bits (697), Expect = 6e-89
 Identities = 124/302 (41%), Positives = 178/302 (58%), Gaps = 31/302 (10%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLPGHLKVDFGD----------------- 46
           +++  G FHGRTL A+S++      + GFGPL PG   V + +                 
Sbjct: 146 VIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDA 205

Query: 47  ITALEK-IFK--ESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 103
           +  +E+ +F      +++A  + EPIQGE G+I+PP G+LKA+R LC ++ IL+IADE+Q
Sbjct: 206 LEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQ 265

Query: 104 SGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGN 163
           +G  R+G+M A +   V PD+V L K+LGGG +P+SAV+   E+M    PG HG TFGGN
Sbjct: 266 TGFGRTGKMFAFEHFGVEPDIVTLAKSLGGG-LPLSAVVGRAEIMDW-PPGGHGGTFGGN 323

Query: 164 PLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223
           P+A A A+A LDVI +E L ER+A LGE LR  L ++Q++ P  + +VRG GL   VE  
Sbjct: 324 PVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHP-LIGDVRGLGLMIGVELV 382

Query: 224 K---TALPVSAY--DICLKMKERG--ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDV 276
           K   T  P +     I  +  ERG  +L    H  ++R+ PPL+IS  EL EG   L + 
Sbjct: 383 KDRDTKEPDAELAAKIVARAFERGLLLLTCGPHGNVLRILPPLTISDEELDEGLDILEEA 442

Query: 277 LE 278
           L+
Sbjct: 443 LK 444

Length = 447

>gnl|CDD|201078 pfam00202, Aminotran_3, Aminotransferase class-III

 Score =  265 bits (679), Expect = 1e-87
 Identities = 100/231 (43%), Positives = 143/231 (61%), Gaps = 14/231 (6%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEK-----------I 53
           I++  G FHGRTL A+S++  +   +GFGP LPG   + + D+ A E+           I
Sbjct: 111 IIAFSGGFHGRTLGALSVTGSSGYKKGFGPSLPGVYFLPYPDLEAAEEELACADEALRLI 170

Query: 54  FKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 113
                D IA  + EPIQGE GV+ PP G+L  +R++C K+ +L+IADE+Q+G  R+G++ 
Sbjct: 171 KAVHDDNIAAVIVEPIQGEGGVVPPPPGFLAGLREICKKHGVLLIADEVQTGFGRTGKLF 230

Query: 114 ASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIAS 173
           A +   V PD++ L KAL GG +P+SAVLA  E+M    PG HG TFGGNPLA A A+A 
Sbjct: 231 ACEHYGVTPDIMTLAKALTGG-LPLSAVLATAEIMQAFHPGSHGGTFGGNPLACAAALAV 289

Query: 174 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK 224
           LD+I DE L + +   G+ LR+ L  +Q +    + +VRG+GL  A+E  K
Sbjct: 290 LDIIEDENLLQNAQEKGDYLRKGLLALQDK--PVIGDVRGKGLMIAIEIVK 338

Length = 338

>gnl|CDD|233098 TIGR00707, argD, transaminase, acetylornithine/succinylornithine family

 Score =  246 bits (629), Expect = 1e-79
 Identities = 104/273 (38%), Positives = 155/273 (56%), Gaps = 11/273 (4%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGF 64
           I++    FHGRT+ A+S +   +  +GF PL+PG     + DI +L+K      D+ A  
Sbjct: 118 IIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAID---DETAAV 174

Query: 65  LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124
           + EPIQGE GV      +LKA+R++C   + L+I DE+Q+G+ R+G+  A +   + PD+
Sbjct: 175 IVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDI 234

Query: 125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 184
           + L K LGGGV P+ A LA +EV     PG+HGSTFGGNPLA A A+A L+VI  E+L E
Sbjct: 235 ITLAKGLGGGV-PIGATLAKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLE 293

Query: 185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 244
                G+  ++ L ++ +      KEVRG+GL   +E +         DI  K  E+G+L
Sbjct: 294 NVKEKGDYFKERLEELGK--NYPNKEVRGKGLMLGIELEAPCK-----DIVKKALEKGLL 346

Query: 245 AKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
                  ++R  PPL I+  E+ E   AL + +
Sbjct: 347 VNCAGPKVLRFLPPLIITKEEIDEAVSALEEAI 379

This family of proteins, for which ornithine aminotransferases form an outgroup, consists mostly of proteins designated acetylornithine aminotransferase. However, the two very closely related members from E. coli are assigned different enzymatic activities. One is acetylornithine aminotransferase (EC 2.6.1.11), ArgD, an enzyme of arginine biosynthesis, while another is succinylornithine aminotransferase, an enzyme of the arginine succinyltransferase pathway, an ammonia-generating pathway of arginine catabolism (See MEDLINE:98361920). Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097). Length = 379

>gnl|CDD|183175 PRK11522, PRK11522, putrescine--2-oxoglutarate aminotransferase; Provisional

 Score =  244 bits (625), Expect = 4e-78
 Identities = 105/280 (37%), Positives = 172/280 (61%), Gaps = 10/280 (3%)

Query: 6   VSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKE---SGDQIA 62
           ++  G FHG++L A+S +  +   + F PLLPG   V FG+I A+     E   +GD +A
Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVA 233

Query: 63  GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRP 122
             + EPIQGE GVI+PP+GYL AVR LC ++  L+I DE+Q+G+ R+G+M A + E V+P
Sbjct: 234 AVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQP 293

Query: 123 DMVILGKALGGGVIPVSAVLADKEVMLCI--QPGEHGSTFGGNPLASAVAIASLDVIRDE 180
           D++ L KALGGGV+P+ A +A +EV   +   P  H +TFGGNPLA A A+A+++V+ ++
Sbjct: 294 DILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQ 353

Query: 181 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE 240
            L  ++   G+ L     ++ +++P+ V+E RG+G+  A+EF    +    Y+   +M  
Sbjct: 354 NLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEI---GYNFASEMFR 410

Query: 241 RGILAKPT--HDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           + +L   T  +   +R+ PPL+++  + ++  KA    L 
Sbjct: 411 QRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKALA 450

Length = 459

>gnl|CDD|179270 PRK01278, argD, acetylornithine transaminase protein; Provisional

 Score =  233 bits (596), Expect = 2e-74
 Identities = 108/269 (40%), Positives = 154/269 (57%), Gaps = 9/269 (3%)

Query: 10  GCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPI 69
           G FHGRTLA I+     + + GFGPL+PG  +V FGDI AL+          A  L EPI
Sbjct: 128 GAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKA---AITPNTAAILIEPI 184

Query: 70  QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGK 129
           QGE G+   PD +LK +R LC +  +L+I DE+Q G+ R+G++ A +W  V PD++ + K
Sbjct: 185 QGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMAVAK 244

Query: 130 ALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHL 189
            +GGG  P+ A LA +E    + PG HGST+GGNPLA AV  A LDVI      +    +
Sbjct: 245 GIGGG-FPLGACLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRM 303

Query: 190 GEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH 249
           G  L+Q L  +  +FP+ ++EVRG+GL   ++       V   D+   +++ G+L     
Sbjct: 304 GLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLK-----CVVPNRDLVQALRDEGLLTVGAG 358

Query: 250 DTIVRLTPPLSISSNELQEGSKALHDVLE 278
           D +VRL PPL I+  E+ E  + L    E
Sbjct: 359 DNVVRLLPPLIITEEEIDEALERLERAAE 387

Length = 389

>gnl|CDD|235599 PRK05769, PRK05769, 4-aminobutyrate aminotransferase; Provisional

 Score =  228 bits (584), Expect = 4e-72
 Identities = 101/299 (33%), Positives = 169/299 (56%), Gaps = 29/299 (9%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLPGHLKVDFGD----------------- 46
           I++  G FHGRT  ++S++      R GF PL+PG + V + +                 
Sbjct: 144 IIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNA 203

Query: 47  -ITALE-KIFKE--SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 102
            +  +E  +FK+    +++A  + EPIQGE G ++PP  + K +R L  KY IL+I DE+
Sbjct: 204 VLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEV 263

Query: 103 QSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGG 162
           Q+G+ R+G+M A +   V PD++ L KA+ GG +P+ AV+   E+M  + PG H +TFGG
Sbjct: 264 QTGMGRTGKMFAIEHFGVEPDIITLAKAIAGG-LPLGAVIGRAELMF-LPPGSHANTFGG 321

Query: 163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 222
           NP+A+A A+A+L+ + +E L E +  LGE LR+ L ++++++  ++ +VRG GL   VE 
Sbjct: 322 NPVAAAAALATLEEL-EEGLLENAQKLGEYLRKELKELKEKYE-FIGDVRGLGLMIGVEL 379

Query: 223 ---DKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
               K   P     +  +  +RG+L      + +R+ PPL I+  E   G + L + ++
Sbjct: 380 VKDRKEPDPKLRDKVLYEAFKRGLLLLGAGKSAIRIIPPLIITEEEADIGLEILEEAIK 438

Length = 441

>gnl|CDD|223239 COG0161, BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

 Score =  228 bits (584), Expect = 5e-72
 Identities = 108/298 (36%), Positives = 152/298 (51%), Gaps = 35/298 (11%)

Query: 13  HGRTLAAISMSCDNEAIR--GFGPLLPGHLKVDF-----------------GDITALEKI 53
           HG TL A+S+     A+R   + PLLP  L +                        LE +
Sbjct: 148 HGDTLGAMSV-GGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEAL 206

Query: 54  FKESG-DQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR 111
             E G + IA F+ EP+  G  G+++PP GYLK VR++C KY IL+IADE+ +G  R+G+
Sbjct: 207 ILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGK 266

Query: 112 MLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-----HGSTFGGNPLA 166
           M A +   + PD++ L K L GG +P+SAVL    +      G+     HG T+ GNPLA
Sbjct: 267 MFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLA 326

Query: 167 SAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF---- 222
            A A+A+LD++ +E L ER A +G  L+  L       P  V +VRG GL  A+E     
Sbjct: 327 CAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHP-LVGDVRGLGLIGAIELVADK 385

Query: 223 -DKTALPVSAYD-ICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
             KT         +     ERG+L +P  D I  L PPL I+  E+ E   AL + L+
Sbjct: 386 ATKTPFEARVGARVRAAALERGLLIRPLGDVIY-LMPPLIITREEIDELVDALREALD 442

Length = 449

>gnl|CDD|235112 PRK03244, argD, acetylornithine aminotransferase; Provisional

 Score =  225 bits (576), Expect = 2e-71
 Identities = 107/275 (38%), Positives = 148/275 (53%), Gaps = 13/275 (4%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLPGHLKVDFGDITALEKIFKESGDQIAG 63
           IV+  G FHGRT+ A++++    A R  F PL  G   V +GD+ AL        D  A 
Sbjct: 131 IVAAEGGFHGRTMGALALT-GQPAKRAPFEPLPGGVEHVPYGDVDALAAAV---DDDTAA 186

Query: 64  FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD 123
              EPIQGEAGV+ PP GYL A R++  ++  L++ DE+Q+G+ R+G   A   + V PD
Sbjct: 187 VFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPD 246

Query: 124 MVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLA 183
           +V L K LGGG +P+ A LA       + PG HGSTFGGNP+A A A+A LD I  E L 
Sbjct: 247 VVTLAKGLGGG-LPIGACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLL 305

Query: 184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGI 243
           E +  LGE+LR  +  +       V  VRGRGL   +       PV+   +    +E G 
Sbjct: 306 ENAERLGEQLRAGIEALGHPL---VDHVRGRGLLLGIVLTA---PVAK-AVEAAAREAGF 358

Query: 244 LAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           L       ++RL PPL I+  ++     AL  +L+
Sbjct: 359 LVNAVAPDVIRLAPPLIITDAQVDAFVAALPAILD 393

Length = 398

>gnl|CDD|233000 TIGR00508, bioA, adenosylmethionine-8-amino-7-oxononanoate transaminase

 Score =  224 bits (574), Expect = 7e-71
 Identities = 94/289 (32%), Positives = 147/289 (50%), Gaps = 26/289 (8%)

Query: 12  FHGRTLAAISMSCDNEAIRG-FGPLLPGHLKVDFGD--------------ITALEKIFKE 56
           +HG T  A+S+  D       F PLL   + +                  + ALE + +E
Sbjct: 133 YHGDTFGAMSV-GDVGGFHALFEPLLFEVVFIPAPPCYRCWDPDDCEAECLAALEALLEE 191

Query: 57  SGDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS 115
             D+IA F+ EP+ QG  G+   P  YL+ +R+LC +Y +L+IADEI +G  R+G++ A 
Sbjct: 192 HADEIAAFIVEPLVQGAGGMRFYPPEYLRKLRELCDEYGVLLIADEIATGFGRTGKLFAC 251

Query: 116 DWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE------HGSTFGGNPLASAV 169
           +   V PD++ L K L GG +P++A L   E+       +      HG T+ GNPLA A 
Sbjct: 252 EHAGVTPDILCLSKGLTGGYLPLAATLTTDEIYEAFYSDDEGKAFMHGHTYTGNPLACAA 311

Query: 170 AIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPV 229
           A+ASLD++ +E   E+ A +  +LR  L  ++      V +VR  G   AVE  +   P 
Sbjct: 312 ALASLDLLEEEDWLEQVARIEAQLRAGLAPLRD--HPGVADVRVLGAIGAVELVRDVEPY 369

Query: 230 SAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
               I     ERG+L +P  + I  L PP  I+  EL++ + A+ + ++
Sbjct: 370 IGAKIQQFFLERGVLLRPLGNVIY-LMPPYIITDEELEKLTAAIKEAID 417

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]. Length = 417

>gnl|CDD|132415 TIGR03372, putres_am_tran, putrescine aminotransferase

 Score =  219 bits (560), Expect = 1e-68
 Identities = 109/279 (39%), Positives = 169/279 (60%), Gaps = 10/279 (3%)

Query: 6   VSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKE---SGDQIA 62
           ++  G FHG++L A+S +      + F PLLPG   V FGDI A+ K   E   +GD +A
Sbjct: 167 IAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVA 226

Query: 63  GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRP 122
             + EPIQGE GVI+PP+GYL AVR LC ++  L+I DE+Q+G+ R+G+M A + E V+P
Sbjct: 227 AIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQP 286

Query: 123 DMVILGKALGGGVIPVSAVLADKEV--MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 180
           D++ L KALGGGV+P+ A +A + V  +L   P  H +TFGGNPLA A A+A+++ + ++
Sbjct: 287 DILCLAKALGGGVMPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEK 346

Query: 181 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE 240
            L  ++A  G+ L     ++  ++P+ + E RG+GL  A+EF    +    Y    ++ +
Sbjct: 347 NLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDNEI---GYAFAKELFQ 403

Query: 241 RGILAKPT--HDTIVRLTPPLSISSNELQEGSKALHDVL 277
           + IL   T  +   +R+ PPL+I+  +     KA  D L
Sbjct: 404 QNILVAGTLNNAKSIRIEPPLTITIEQCALVIKAAKDAL 442

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine [Central intermediary metabolism, Polyamine biosynthesis]. Length = 442

>gnl|CDD|179505 PRK02936, argD, acetylornithine aminotransferase; Provisional

 Score =  204 bits (522), Expect = 1e-63
 Identities = 102/277 (36%), Positives = 153/277 (55%), Gaps = 18/277 (6%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGF 64
           IV+    FHGRT   +S +   +   GFGPLLPG   V F DI AL+++  E   ++A  
Sbjct: 115 IVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE---EVAAV 171

Query: 65  LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124
           + E +QGE GVI     +L+ V+ LC K+  L+I DE+Q+G+ R+G + A +   + PD+
Sbjct: 172 MLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDI 231

Query: 125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD----E 180
           V + K LG G IPV A++  KE+     PG HGSTFGGNPLA A A   L VI+     E
Sbjct: 232 VTVAKGLGNG-IPVGAMIGKKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQPSFLE 290

Query: 181 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE 240
           ++ E+  +  ++L++ L    +     VK +RG+GL   +E  +   PV       +++E
Sbjct: 291 EVQEKGEYFLQKLQEEL----EHLEC-VKNIRGKGLMIGIECTEEVAPVIE-----QLRE 340

Query: 241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
            G+L       ++RL PPL ++  EL +    L  VL
Sbjct: 341 EGLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKVL 377

Length = 377

>gnl|CDD|181234 PRK08117, PRK08117, 4-aminobutyrate aminotransferase; Provisional

 Score =  204 bits (522), Expect = 6e-63
 Identities = 100/301 (33%), Positives = 165/301 (54%), Gaps = 33/301 (10%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLPGHLKVDFGD----------------- 46
           I+S  GCFHGRTL A+S++      R  + PLL    +  +                   
Sbjct: 132 IISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLEC 191

Query: 47  ITALEKIFKE--SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 104
           +  LE +FK   + +++A  + EP+ GE G I+PP  +LK +R++C ++ IL+I DE+Q+
Sbjct: 192 LRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT 251

Query: 105 GLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNP 164
           G  R+G   A+    V PD++ + K +  G +P+SAV+A KE+M     G HG+TFGGNP
Sbjct: 252 GFGRTGEWFAAQTFGVVPDIMTIAKGIASG-LPLSAVVASKELMEQWPLGSHGTTFGGNP 310

Query: 165 LASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF-D 223
           +A A A+A+L+VI++EKL + +  +G    + L  ++++ P  + +VRG GL   +E  D
Sbjct: 311 VACAAALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHP-VIGDVRGIGLMIGIEIVD 369

Query: 224 KTALPVSAYDICLKMK----ERGIL---AKPTHDTIVRLTPPLSISSNELQEGSKALHDV 276
               P    D   K+     E+G+L        + ++R+ PPL+++  E+ EG   L + 
Sbjct: 370 PDGEP--DGDAVEKILDKCLEKGLLFYLCGNAGN-VLRMIPPLTVTKEEIDEGLDILDEA 426

Query: 277 L 277
           L
Sbjct: 427 L 427

Length = 433

>gnl|CDD|236032 PRK07495, PRK07495, 4-aminobutyrate aminotransferase; Provisional

 Score =  195 bits (498), Expect = 1e-59
 Identities = 108/302 (35%), Positives = 165/302 (54%), Gaps = 25/302 (8%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLPGHLKVDF----------GDITALEKI 53
           +++  G FHGRT   +S++      + GFG ++P    V F            + AL+K+
Sbjct: 130 VIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKL 189

Query: 54  FKESGD--QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR 111
           FK   D  ++A  + EP+QGE G    P  ++KA+R+LC ++ IL+IADE+Q+G AR+G+
Sbjct: 190 FKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGK 249

Query: 112 MLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAI 171
           + A +  EV  D+  + K L GG  P++AV    E+M    PG  G T+GGNPL  A A 
Sbjct: 250 LFAMEHHEVAADLTTMAKGLAGG-FPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAH 308

Query: 172 ASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD--KTALPV 229
           A LDVI +E L ER+  LG  L+Q L  +++  P    ++RG G  NAVEF+   + LP 
Sbjct: 309 AVLDVIEEEDLCERANQLGNRLKQRLASLRETVPEIA-DIRGPGFMNAVEFNDADSGLPS 367

Query: 230 S--AYDICLKMKERG--ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMR 285
           +  A  + LK  E+G  +L    H  ++R   P++I  +   E   AL D+LE  + +  
Sbjct: 368 AEFANRVRLKALEKGLILLTCGVHGNVIRFLAPITIQDDVFAE---AL-DILEASILEAS 423

Query: 286 KP 287
             
Sbjct: 424 AA 425

Length = 425

>gnl|CDD|179933 PRK05093, argD, bifunctional N-succinyldiaminopimelate- aminotransferase/acetylornithine transaminase protein; Reviewed

 Score =  189 bits (482), Expect = 3e-57
 Identities = 95/277 (34%), Positives = 139/277 (50%), Gaps = 10/277 (3%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGF 64
           I++    FHGRTL  +S+    +   GFGP       V F D+ A++ +     D     
Sbjct: 132 IIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLAAVKAVI---DDHTCAV 188

Query: 65  LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124
           + EPIQGE GVI     +L+ +R+LC ++N L+I DE+Q+G+ R+G + A     V PD+
Sbjct: 189 VVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDI 248

Query: 125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 184
           +   KALGGG  P+ A+L   E+    + G HGST+GGNPLA AVA A  D+I   ++ E
Sbjct: 249 LTSAKALGGG-FPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLE 307

Query: 185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 244
                 +     L KI Q++     E+RG GL    E  K      A D      E G++
Sbjct: 308 GVKARRQRFVDGLQKINQKY-GVFSEIRGMGLLIGAEL-KPQYKGRARDFLNAAAEEGVM 365

Query: 245 AKPTHDTIVRLTPPLSISSNELQEG----SKALHDVL 277
                  ++R  P L I   ++ EG     KA+  V+
Sbjct: 366 VLVAGPDVLRFAPSLVIEEADIDEGLARFEKAVAKVV 402

Length = 403

>gnl|CDD|129783 TIGR00700, GABAtrnsam, 4-aminobutyrate aminotransferase, prokaryotic type

 Score =  189 bits (481), Expect = 4e-57
 Identities = 91/298 (30%), Positives = 139/298 (46%), Gaps = 27/298 (9%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLPGHLKVDF----------------GDI 47
           +V+    FHGRT   ++++      + GFGP  P   +                   G++
Sbjct: 123 VVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGEL 182

Query: 48  TALEKIFKES--GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 105
            A   IF      + +A  + EP+QGE G I+P  G++ A+ D C ++ I+ IADE+Q+G
Sbjct: 183 AAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTG 242

Query: 106 LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPL 165
            AR+G M A + E   PD++   K+L  G +P+S V    E+M    PG  G T+ GNPL
Sbjct: 243 FARTGAMFACEHEGPEPDLITTAKSLADG-LPLSGVTGRAEIMDAPAPGGLGGTYAGNPL 301

Query: 166 ASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT 225
           A A A+A L +I  E L ER+  +G  +   L  ++   P  + +VRG G   AVE    
Sbjct: 302 ACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDP-RIGDVRGLGAMIAVELVDP 360

Query: 226 ALPVSAYDICLKMKERG------ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
                   +  ++          +L       I+R  PPL+I    L EG   L  +L
Sbjct: 361 GTTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDELLSEGLDILCAIL 418

This enzyme is a class III pyridoxal-phosphate-dependent aminotransferase. This model describes known bacterial examples of the enzyme. The best archaeal matches are presumed but not trusted to have the equivalent function. The degree of sequence difference between this set and known eukaryotic (mitochondrial) examples is greater than the distance to some proteins known to have different functions, and so separate models are built for prokaryotic and eukaryotic sets. E. coli has two isozymes. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase [Central intermediary metabolism, Other]. Length = 420

>gnl|CDD|177748 PLN00144, PLN00144, acetylornithine transaminase

 Score =  183 bits (467), Expect = 2e-55
 Identities = 102/274 (37%), Positives = 148/274 (54%), Gaps = 10/274 (3%)

Query: 6   VSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFL 65
           VS    FHGRTL A++++   +    F PL+PG   V++G++ A  K+ ++   + A   
Sbjct: 115 VSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQK--GKTAAVF 172

Query: 66  FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV 125
            EP+QGE G+      +L+ +R LC +   L++ DE+Q GL R+G + A +   V PD++
Sbjct: 173 VEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPDIM 232

Query: 126 ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAER 185
            L K L GG +P+ AVL  ++V   I PG+HGSTF G PL    A+A LD I        
Sbjct: 233 TLAKPLAGG-LPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLAS 291

Query: 186 SAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA 245
            A  GE LR+ L +     P +VKEVRG GL   ++ D  A P+   D C    + G+L 
Sbjct: 292 VAKKGEYLRELLRRKLGGNP-HVKEVRGVGLLVGIQLDVPAGPL--VDACR---DSGLLV 345

Query: 246 -KPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
                  +VRL PPL IS  EL++  + L D L 
Sbjct: 346 LTAGKGDVVRLVPPLVISEAELEQAVEILADCLP 379

Length = 382

>gnl|CDD|181493 PRK08593, PRK08593, 4-aminobutyrate aminotransferase; Provisional

 Score =  184 bits (468), Expect = 7e-55
 Identities = 94/316 (29%), Positives = 152/316 (48%), Gaps = 45/316 (14%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAI-----RGFGPLLPGHLKVDFGDITALEKIFKES-- 57
           I+S    +HG T  ++SMS     I     R +GPLLPG + + F D      +++E   
Sbjct: 132 IISFTNAYHGSTYGSLSMS----GISLNMRRKYGPLLPGFVHIPFPDKY--RGMYEEPDA 185

Query: 58  -------------------GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMI 98
                               D++A  + E IQG+ G++ P  GY +A+   C ++ IL  
Sbjct: 186 NFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFA 245

Query: 99  ADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS 158
            D+IQ GL R+G+  +     + PD++  GK+L GG +P+SA++  KE+M  ++   H  
Sbjct: 246 VDDIQQGLGRTGKWSSISHFNITPDLMSFGKSLAGG-MPMSAIVGRKEIMESLEAPAHLF 304

Query: 159 TFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 218
           T G NP++ A A+A++D+I DE L +RSA  GE  R+   +   ++  +V +VRG GL  
Sbjct: 305 TTGANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYN-FVGDVRGYGLSI 363

Query: 219 AVEF-----DKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKAL 273
            ++       KT    +A  IC    E G++       ++R  PPL I+  +L      +
Sbjct: 364 GIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAVAGNVLRFQPPLVITYEQLDTALNTI 423

Query: 274 HDVLE------LDLPK 283
                      LD P 
Sbjct: 424 EQAFTALEAGKLDQPD 439

Length = 445

>gnl|CDD|180690 PRK06777, PRK06777, 4-aminobutyrate aminotransferase; Provisional

 Score =  182 bits (464), Expect = 1e-54
 Identities = 103/284 (36%), Positives = 163/284 (57%), Gaps = 26/284 (9%)

Query: 10  GCFHGRTLAAISMSCDNEAIR-GFGPLLPGHL----------KVDFGD-ITALEKIFKE- 56
           G FHGRTL  ++++      + GFGP  PG +           V   + ++++E++FK  
Sbjct: 135 GAFHGRTLLTMALTGKVAPYKVGFGPF-PGSIFHALYPNELHGVSVEEALSSVERLFKAD 193

Query: 57  -SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS 115
            + DQ+A  L EPIQGE G  + P  ++ A+R LC ++ IL+IADE+Q+G AR+G++ A 
Sbjct: 194 IAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAM 253

Query: 116 DWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLD 175
           ++ +V+PD++ + K+LGGG +P+SAV+   EVM    PG  G T+ GNPLA A A+A LD
Sbjct: 254 EYYDVKPDLITMAKSLGGG-MPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLD 312

Query: 176 VIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDIC 235
           VI +EKL +R+  LG  L + L K +   P  + ++R RG   AVEF+       + +  
Sbjct: 313 VIAEEKLCQRALILGAHLVEVLEKAKASCP-AIVDIRARGSMVAVEFNDPQTGKPSPEFT 371

Query: 236 LKMKERG------ILAKPTHDTIVRLTPPLSISSNELQEGSKAL 273
            + + +       +L+   H  ++R   PL+I   +    SKAL
Sbjct: 372 RQYQRQALEEGLLLLSCGVHGNVIRFLYPLTIPDAQF---SKAL 412

Length = 421

>gnl|CDD|179868 PRK04612, argD, acetylornithine transaminase protein; Provisional

 Score =  181 bits (460), Expect = 4e-54
 Identities = 108/273 (39%), Positives = 152/273 (55%), Gaps = 7/273 (2%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           + +IV+  G FHGRTLAA++ +   +   G+ PL  G   VDF D+ ALE      GD +
Sbjct: 131 KRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMA-GGD-V 188

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           A  + EPIQGE GV+    G+L  VR LC +++ L++ DEIQ G+ R+G + A   E+V 
Sbjct: 189 AAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVT 248

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+V L KALGGG  P+ A+LA  +V   +Q G HG+TFGGNPLA+AVA  +L  +   +
Sbjct: 249 PDIVTLAKALGGG-FPIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQ 307

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL-FNAVEFDKTALPVSAYDICLKMKE 240
           +A   A     LR  L  +  +F  +  +VRGRGL   AV     A    A  I     E
Sbjct: 308 IAANVARQSAALRAGLEALNAEFGVF-AQVRGRGLMLGAVLAPAHAGQAGA--ILDLAAE 364

Query: 241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKAL 273
            G+L       ++R  P L+++  EL +G   L
Sbjct: 365 HGLLLLQAGPDVLRFVPALNLTDAELADGLARL 397

Length = 408

>gnl|CDD|235885 PRK06918, PRK06918, 4-aminobutyrate aminotransferase; Reviewed

 Score =  180 bits (458), Expect = 2e-53
 Identities = 98/301 (32%), Positives = 158/301 (52%), Gaps = 29/301 (9%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLPGHLKVDFGD----------------- 46
           I+S    FHGRTL  ++M+   +  + GFGP  P   K  F                   
Sbjct: 144 IISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFM 203

Query: 47  ITALEKIFKESGD--QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 104
           I   +  F        IA  + EP+QGE G I+P   +++ VR++CS++ IL +ADEIQ+
Sbjct: 204 IEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQT 263

Query: 105 GLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNP 164
           G AR+G+  A +  +V PD++ + K+LG GV P+S V+  KE+M    PGE G T+ G+P
Sbjct: 264 GFARTGKYFAIEHFDVVPDLITVSKSLGAGV-PISGVIGRKEIMDESAPGELGGTYAGSP 322

Query: 165 LASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF-- 222
           L  A A+A LD+I  E L +R+  LG+ +     +++ ++   + +VRG G   A E   
Sbjct: 323 LGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYN-CIGDVRGLGAMCAFELVQ 381

Query: 223 ---DKTALPVSAYDICLKMKERG--ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
               K        +IC +  +RG  +L+  T+  ++R+  PL I+  +L+EG   + + L
Sbjct: 382 DRKTKEPDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESL 441

Query: 278 E 278
           +
Sbjct: 442 Q 442

Length = 451

>gnl|CDD|101376 PRK04013, argD, acetylornithine/acetyl-lysine aminotransferase; Provisional

 Score =  177 bits (451), Expect = 3e-53
 Identities = 101/274 (36%), Positives = 149/274 (54%), Gaps = 26/274 (9%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITAL-EKIFKESGDQIAG 63
           I++    FHGRT+ A+S +   +    F PL+PG   + F D+ A  E I KE+    A 
Sbjct: 110 IIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAKEAITKET----AA 165

Query: 64  FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD 123
            +FEPIQGE G++   + ++K +RDL      L+IADE+QSGL R+G+ LA +  +V PD
Sbjct: 166 VIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPD 224

Query: 124 MVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLA 183
           +V +GK +G GV PVS  L + +V    + G+HGSTFGGNPLA      +L ++R E+L 
Sbjct: 225 IVTMGKGIGNGV-PVSLTLTNFDV----ERGKHGSTFGGNPLACKAVAVTLRILRRERLV 279

Query: 184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGI 243
           E++            K  +     V   RGRGL   +   K   PV  Y    +++ RG 
Sbjct: 280 EKAGE----------KFIEIKGERVVTTRGRGLMIGIVLKK---PVGKY--VEELQNRGY 324

Query: 244 LAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           L       ++RL PPL IS + ++E   A+  V+
Sbjct: 325 LVHTAGQRVIRLLPPLIISKDTMEEAKSAIEGVI 358

Length = 364

>gnl|CDD|235685 PRK06058, PRK06058, 4-aminobutyrate aminotransferase; Provisional

 Score =  179 bits (456), Expect = 3e-53
 Identities = 90/291 (30%), Positives = 144/291 (49%), Gaps = 30/291 (10%)

Query: 12  FHGRTLAAISMSCDNEAIR-GFGPLLPGHLKV----DFGDIT------------ALEKIF 54
           +HGRT   ++++  +   + GFGP  P   +      + D              A+  I 
Sbjct: 153 YHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIE 212

Query: 55  KESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 113
           K+ G D +A  + EPIQGE G I+P +G+L A+ + C +  ++ IADE+Q+G AR+G   
Sbjct: 213 KQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWF 272

Query: 114 ASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIAS 173
           A + E + PD++   K + GG +P+SAV    E+M    PG  G T+GGNP+A A A+A+
Sbjct: 273 ACEHEGIVPDLITTAKGIAGG-LPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAA 331

Query: 174 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF----DKTALPV 229
           ++ I ++ L  R+  +   +   L  +  +    + +VRGRG   A+E            
Sbjct: 332 IETIEEDDLVARARQIEALMTDRLRALAAEDD-RIGDVRGRGAMIAIELVKPGTTEPDAE 390

Query: 230 SAYDICLKMKERG--ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
               +       G  +L   T+  ++RL PPL I    L+EG     DVLE
Sbjct: 391 LTKALAAAAHAAGVIVLTCGTYGNVIRLLPPLVIGDELLREGL----DVLE 437

Length = 443

>gnl|CDD|132290 TIGR03246, arg_catab_astC, succinylornithine transaminase family

 Score =  174 bits (444), Expect = 7e-52
 Identities = 91/265 (34%), Positives = 138/265 (52%), Gaps = 6/265 (2%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGF 64
           IV+    FHGRTL  +S+    +  +GF PL  G     + D+ A + +     D+    
Sbjct: 127 IVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALI---SDKTCAV 183

Query: 65  LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124
           + EPIQGE GV+     +LK +R+LC ++N L+I DE+Q+G+ R+G + A     V PD+
Sbjct: 184 IVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDI 243

Query: 125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 184
           +   KALGGG  P+ A+L   E+   ++ G HG+T+GGNPLA AVA   LD++   +L  
Sbjct: 244 LTSAKALGGG-FPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLA 302

Query: 185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 244
                 +     L KI  ++ N   E+RG+GL       + A    A        E G++
Sbjct: 303 GVKQRHDLFVDGLEKINARY-NVFSEIRGKGLLIGAVLTE-AYQGKAKQFVNAAAEEGVI 360

Query: 245 AKPTHDTIVRLTPPLSISSNELQEG 269
           A      +VR  P L IS +++ EG
Sbjct: 361 ALIAGPNVVRFAPSLVISDDDIDEG 385

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason [Energy metabolism, Amino acids and amines]. Length = 397

>gnl|CDD|235884 PRK06917, PRK06917, hypothetical protein; Provisional

 Score =  175 bits (445), Expect = 1e-51
 Identities = 103/327 (31%), Positives = 157/327 (48%), Gaps = 49/327 (14%)

Query: 4   IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLL--------PGHLKVDFGD--------- 46
            I+S    +HG T+ A+SMS      + F  LL        P   +              
Sbjct: 125 KILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLAC 184

Query: 47  ----ITALEKIFKESGDQIAGFLFEPIQGEAG-VIIPPDGYLKAVRDLCSKYNILMIADE 101
                TA+E+I  E    IA F+ EPI G AG  ++PP GY K ++++C  Y+IL IADE
Sbjct: 185 ATELETAIERIGAE---HIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADE 241

Query: 102 IQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEH----G 157
           + +GL R+G M A +   V PD++ LGK LG G  P++A +    VM  I  G      G
Sbjct: 242 VMTGLGRTGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSG 301

Query: 158 STFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 217
            T   NPL++A A+A L+ +    L E++A  GE L + L K+QQQ    + +VRG+GL 
Sbjct: 302 HTLSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQST-IIGDVRGKGLL 360

Query: 218 NAVEF-----DKTALPVS---AYDICLKMKERGILAKPTHDTI-------VRLTPPLSIS 262
             VEF      K     S   A ++     + G+L  P            V + PP++I+
Sbjct: 361 IGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTIT 420

Query: 263 SNELQE----GSKALHDVLELDLPKMR 285
            +EL E     +K++ ++++     + 
Sbjct: 421 YSELDELLSIFAKSVEEMMQKGGHSIA 447

Length = 447

>gnl|CDD|235656 PRK05964, PRK05964, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

 Score =  170 bits (432), Expect = 8e-50
 Identities = 91/292 (31%), Positives = 143/292 (48%), Gaps = 25/292 (8%)

Query: 5   IVSCCGCFHGRTLAAISMSCD----NEAIRGFGPLLPGHLKVDF-------GDITALEKI 53
            +S  G +HG T+  +S+  D    +     + PLL   +   F         + ALE +
Sbjct: 137 FLSLRGGYHGDTIGTMSV-GDRGGMHAL---YTPLLFEQVTAPFPPDGYEQATLDALEAL 192

Query: 54  FKESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM 112
            ++   +IA F+ EP +QG  G++     YL  +R +C ++ +L+I DEI +G  R+G +
Sbjct: 193 LEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTL 252

Query: 113 LASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE------HGSTFGGNPLA 166
            A +   V PD++ L K L GG +P++A L   E+       +      H  ++  NPLA
Sbjct: 253 FACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLA 312

Query: 167 SAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA 226
            A A ASLD+  DE + ER A L   L + L    +  P  V +VR  G   AVE D+  
Sbjct: 313 CAAANASLDLFEDEPVLERVAALSAGLAEGLEPF-RDLPG-VADVRVLGAIGAVELDRPV 370

Query: 227 LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           L      +     ERG+L +P  +TI  L PP  I++ EL   + A+ +V +
Sbjct: 371 LERDGPALRAFALERGVLLRPLGNTIY-LMPPYIITAEELDRITDAIVEVAD 421

Length = 423

>gnl|CDD|181401 PRK08360, PRK08360, 4-aminobutyrate aminotransferase; Provisional

 Score =  170 bits (433), Expect = 9e-50
 Identities = 96/308 (31%), Positives = 160/308 (51%), Gaps = 34/308 (11%)

Query: 5   IVSCCGCFHGRTLAAISMS-CDNEAIRGFGPL-------LPGHLKVDFG------DITAL 50
           I+S    ++G T  A+S++  D       G L        P   +  FG       +  +
Sbjct: 130 ILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECV 189

Query: 51  EKIFKES------GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 104
           E I KE        + +A    EPIQG+AG+I+PP+ Y K ++ +  ++ IL++ DE+QS
Sbjct: 190 EYI-KEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQS 248

Query: 105 GLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNP 164
           GL R+G+  A +   V PD++ LGK LGGG +P+SA +   E+M  + P  H  T  GNP
Sbjct: 249 GLGRTGKWFAIEHFGVEPDIITLGKPLGGG-LPISATIGRAEIMDSLPPLAHAFTLSGNP 307

Query: 165 LASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF-- 222
           +ASA A+A ++ I ++ L +R+  LG   ++ L +++++    + +VRG GL   V+   
Sbjct: 308 VASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHE-LIGDVRGIGLMIGVDLVK 366

Query: 223 DKTALPVSAYD----ICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEG----SKALH 274
           D+      AY+    +  +  E G++       ++R+ PPL+I    L EG     +A+ 
Sbjct: 367 DRET-KERAYEEAAKVVWRAWELGLIVTFFSGNVLRIQPPLTIEKEVLDEGLDILEEAIE 425

Query: 275 DVLELDLP 282
           DV E  +P
Sbjct: 426 DVEEGKVP 433

Length = 443

>gnl|CDD|182078 PRK09792, PRK09792, 4-aminobutyrate transaminase; Provisional

 Score =  168 bits (427), Expect = 4e-49
 Identities = 97/294 (32%), Positives = 152/294 (51%), Gaps = 23/294 (7%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLPG-----------HLKVDFGDITALEK 52
           +++  G FHGRT   ++++      + GFGP  PG           H       + A+E+
Sbjct: 130 VIAFSGGFHGRTYMTMALTGKVAPYKIGFGPF-PGSVYHVPYPSDLHGISTQDSLDAIER 188

Query: 53  IFKESGD--QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG 110
           +FK   +  Q+A  +FEP+QGE G  + P   + A+R LC ++ I+MIADE+QSG AR+G
Sbjct: 189 LFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTG 248

Query: 111 RMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVA 170
           ++ A D    +PD++ + K+L GG +P+S V+ +  +M    PG  G T+ GNPLA A A
Sbjct: 249 KLFAMDHYADKPDLMTMAKSLAGG-MPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAA 307

Query: 171 IASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVS 230
            A L++I  E L ER+  LG+ L+  L   ++  P     VRG G   A EF+       
Sbjct: 308 HAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIA-AVRGLGSMIAAEFNDPQTGEP 366

Query: 231 AYDICLKMKERG------ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           +  I  K+++R       +L    +  ++R   PL+I   +     K L D L 
Sbjct: 367 SAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDAQFDAAMKILQDALS 420

Length = 421

>gnl|CDD|180746 PRK06916, PRK06916, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

 Score =  169 bits (429), Expect = 4e-49
 Identities = 90/290 (31%), Positives = 148/290 (51%), Gaps = 36/290 (12%)

Query: 12  FHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF--------GD---------ITALEKIF 54
           +HG T+ A+S+   +   + +  LL   +K+ +        G+         +  LE++ 
Sbjct: 158 YHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELL 217

Query: 55  KESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 113
           KE  ++IA  + EP +QG  G+I  P GYLK +R+LC+KYN+L I DE+ +G  R+G+M 
Sbjct: 218 KEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMF 277

Query: 114 ASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-------HGSTFGGNPLA 166
           A + E V PD++  GK L GG +P++  +   E+               HG ++ GNPL 
Sbjct: 278 ACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLG 337

Query: 167 SAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF--DK 224
            AVA+A+L++     L E+ A   E +   L  +      +V ++R  GL   +E   +K
Sbjct: 338 CAVALANLELYEKTNLIEQVARKTEYVATQLEDLFAL--KHVGDIRQLGLMVGIELVKNK 395

Query: 225 -TALPVS-----AYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQE 268
            T  P          +C + +E G+L +P  +TIV   PPL+ + +EL E
Sbjct: 396 ETKEPFEWTERVGVQVCKRSRELGMLTRPLGNTIV-FMPPLASTIDELDE 444

Length = 460

>gnl|CDD|168967 PRK07481, PRK07481, hypothetical protein; Provisional

 Score =  164 bits (416), Expect = 3e-47
 Identities = 90/301 (29%), Positives = 147/301 (48%), Gaps = 36/301 (11%)

Query: 12  FHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD--------FGD----------ITALEK- 52
           +HG      S++ +    R + PLLPG   V+        F +             LE+ 
Sbjct: 146 YHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLERE 205

Query: 53  IFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM 112
           I  +  D IA F+ EP+QG  GVI+PP  +   VR++C ++ IL+IADE+ +G  R+G  
Sbjct: 206 IAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSW 265

Query: 113 LASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-------HGSTFGGNPL 165
             S    V+PD++ L K +  G +P+ A + +  +    +          HG T+ G+P+
Sbjct: 266 FGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPV 325

Query: 166 ASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF--D 223
           A A A+A+LD++  E L   +A  G  L + L  ++++F   V +VRG+GL  A++   D
Sbjct: 326 ACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFE-LVGDVRGKGLMLALDLVAD 384

Query: 224 K-TALPVSAYDICLKM-----KERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           K T  P+              +E G+L +P+   I+ L+PPL I   ++     AL   L
Sbjct: 385 KATREPIDPSKGYANAVADVARENGVLVRPSGTKII-LSPPLVIQREDVDRIVDALDAGL 443

Query: 278 E 278
            
Sbjct: 444 S 444

Length = 449

>gnl|CDD|180390 PRK06082, PRK06082, 4-aminobutyrate aminotransferase; Provisional

 Score =  161 bits (410), Expect = 2e-46
 Identities = 83/301 (27%), Positives = 148/301 (49%), Gaps = 28/301 (9%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKV-------------DFGDITA-- 49
           +VS    FHG +L AIS+  +    +G GPL+ G  ++             D  D+    
Sbjct: 159 VVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYAD 218

Query: 50  -LEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 108
            LE + ++ G  I  F+ E ++    V +P   Y K VR++C K+N+L+I DEI +G+ R
Sbjct: 219 YLEYVIEKEGG-IGAFIAEAVRN-TDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGR 276

Query: 109 SGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASA 168
           +G         + PD++ +GK LGGG++P++A++   +     Q      T   +PL  A
Sbjct: 277 TGEWFTHQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNTAAQISLGHYTHEKSPLGCA 336

Query: 169 VAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF-----D 223
            A+A+++VI  E L E+     + +R+ L +++ ++P  + +VRG GL   VE       
Sbjct: 337 AALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYP-LIGDVRGIGLLWGVELVTDRHT 395

Query: 224 KTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEG----SKALHDVLEL 279
           K      A  +  +    G+  K +   +++L+PPL I+  EL +      +A+  + + 
Sbjct: 396 KERAYDEAEAVLYRCLNNGLSFKVSQGNVIQLSPPLIITREELTQALAILEEAIAKICQD 455

Query: 280 D 280
            
Sbjct: 456 F 456

Length = 459

>gnl|CDD|235687 PRK06062, PRK06062, hypothetical protein; Provisional

 Score =  160 bits (407), Expect = 7e-46
 Identities = 91/301 (30%), Positives = 155/301 (51%), Gaps = 40/301 (13%)

Query: 12  FHGRTLAAISMSCD-----NEAIRG-----FGPLLPGHLKVDFGDITA----------LE 51
           +HG T +AI+++ D     N+  R      FGP L    + +F   T           LE
Sbjct: 148 YHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFL---YRSEFHATTEEEECERALAHLE 204

Query: 52  KIFK-ESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG 110
           ++ + E    IA  L E + G AG+++PP GYL  VR+LC ++ I++IADE+ +G  R+G
Sbjct: 205 RVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTG 264

Query: 111 RMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV--MLCIQPGEHGSTFGGNPLASA 168
           +  A +   V PD++   K +  G +P+  V   + +      +P   G T+ G+PLA A
Sbjct: 265 KWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACA 324

Query: 169 VAIASLDVIRDEKLAERSAHLGEE-LRQHLFKIQQQFPNYVKEVRGRGLFNAVEF---DK 224
            A+A+++ + +E + E +A +G E L   L ++ ++ P+ V EVRG G+F A+E     +
Sbjct: 325 AAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPS-VGEVRGLGVFWALELVADRE 383

Query: 225 TALPVSAYDICLK--------MKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDV 276
           T  P++ Y              KERG+L    +   + + PP +++ +E++EG   L   
Sbjct: 384 TREPLAPYGASSAAMAAVKAACKERGLLPF-VNGNRIHVVPPCTVTEDEVREGLAILDAA 442

Query: 277 L 277
           L
Sbjct: 443 L 443

Length = 451

>gnl|CDD|181078 PRK07678, PRK07678, aminotransferase; Validated

 Score =  160 bits (407), Expect = 7e-46
 Identities = 97/308 (31%), Positives = 151/308 (49%), Gaps = 47/308 (15%)

Query: 12  FHGRTLAAISMSCDNEAIRG--FGPLLPGHLKV---------DFG--DITALE------- 51
           +HG ++ A  ++   +A R   + PL PG L V              DI  LE       
Sbjct: 147 YHGNSMGA--LAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDR 204

Query: 52  KIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR 111
            +  E  + IA  + EPI    GV++PP  Y+KAV+++C K+  L+I+DE+  G  R+G+
Sbjct: 205 VMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGK 264

Query: 112 MLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE------HGSTFGGNPL 165
                   V+PD++ + K +    +P+SA    KE+    +         H +TFGGNP 
Sbjct: 265 AFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPA 324

Query: 166 ASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF--D 223
           A A+A+ +L+++ +E L ERSA LGE L + L +   + P  V ++RG+GL   +E   D
Sbjct: 325 ACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHP-LVGDIRGKGLLVGIELVND 383

Query: 224 K-TALPVSAYDI------CLKMKERGILAKPTHDT------IVRLTPPLSISSNELQEGS 270
           K T  P     +      C   KE+G++     DT      ++ L+PPL ISS E+    
Sbjct: 384 KETKEPADNDKVASVVAAC---KEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIV 440

Query: 271 KALHDVLE 278
             L   LE
Sbjct: 441 GTLKTALE 448

Length = 451

>gnl|CDD|179636 PRK03715, argD, acetylornithine transaminase protein; Provisional

 Score =  159 bits (403), Expect = 8e-46
 Identities = 86/273 (31%), Positives = 144/273 (52%), Gaps = 8/273 (2%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGF 64
           I++    FHGRTLA +S S        F P +PG  K +  DI ++EK+     D+    
Sbjct: 127 IITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLI---TDKTVAV 183

Query: 65  LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124
           + EP+QGE GVI     +++ +R L  ++ +L+I DE+Q+G  R+G + A +   + PD+
Sbjct: 184 MLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDI 243

Query: 125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 184
           + LGK +GGGV P++A+LA  EV    + G+ G T+ GNPL +AV +A +  +      E
Sbjct: 244 MTLGKGIGGGV-PLAALLAKAEVA-VFEAGDQGGTYNGNPLMTAVGVAVISQLLAPGFLE 301

Query: 185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 244
                GE L++ L ++ ++    ++  RG GL  A+   K   P    +    M+  G+L
Sbjct: 302 GVRARGEYLKEKLLELSEERG--LEGERGEGLLRALLLGKDIGP-QIVEKARDMQPDGLL 358

Query: 245 AKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
                  ++R  P L++++ E+ +    L  VL
Sbjct: 359 LNAPRPNLLRFMPALNVTTEEIDQMIAMLRSVL 391

Length = 395

>gnl|CDD|179803 PRK04260, PRK04260, acetylornithine aminotransferase; Provisional

 Score =  158 bits (401), Expect = 8e-46
 Identities = 84/266 (31%), Positives = 139/266 (52%), Gaps = 10/266 (3%)

Query: 12  FHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQG 71
           FHGRT  ++S +  ++   GFG  +P      F D+ +++ +        A  + E +QG
Sbjct: 120 FHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKAL---VNKNTAAVMLELVQG 176

Query: 72  EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKAL 131
           E+GV+     ++KA+ D C +  IL+I DE+Q+G+ R+G++ A +   + PD+  L K L
Sbjct: 177 ESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFTLAKGL 236

Query: 132 GGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGE 191
             GV PV A+LA   +      G HGSTFGGN L+ A A A+LD++      E++   G 
Sbjct: 237 ANGV-PVGAMLAKSSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGN 295

Query: 192 ELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDT 251
            L++ L K  Q     V  VRG G    +E   TA       +    +++G++       
Sbjct: 296 YLQEQLQKALQDKET-VTTVRGLGYMIGIE--TTADLS---QLVEAARDKGLIVLTAGTN 349

Query: 252 IVRLTPPLSISSNELQEGSKALHDVL 277
           ++RL PPL+++  E+++G   L +V 
Sbjct: 350 VIRLLPPLTLTKEEIEQGIAILSEVF 375

Length = 375

>gnl|CDD|235892 PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

 Score =  159 bits (405), Expect = 2e-45
 Identities = 98/307 (31%), Positives = 161/307 (52%), Gaps = 36/307 (11%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG--------HLKVDFG---------DI 47
           ++S  G +HG +  A+S+  +    +  G LLPG          +  FG         ++
Sbjct: 156 VLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANL 215

Query: 48  TALEKIFK--ESGDQI-AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 104
             LE +    ESG  + A  + E +QGE GVI  P  +L+ +R +  +  I +I DEIQS
Sbjct: 216 HYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQS 275

Query: 105 GLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNP 164
           G  R+G+M A +   + PD+V+L KA+GG  +P++ V+  + +    QPG H  TF GN 
Sbjct: 276 GFGRTGKMFAFEHAGIIPDVVVLSKAIGGS-LPLAVVVYREWLDTW-QPGAHAGTFRGNQ 333

Query: 165 LASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF-D 223
           +A A   A+L  I++ +LAE +A +GE LR+HL ++Q+ +P  + +VRGRGL   VE  D
Sbjct: 334 MAMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYP-QLGDVRGRGLMLGVEIVD 392

Query: 224 KTALPVS----------AYDICLKMKERGILAK--PTHDTIVRLTPPLSISSNELQEGSK 271
               P +          A  I  +   RG++ +    H ++VR  PPL I++ ++ E ++
Sbjct: 393 PQGEPDALGHPPANGELASLIQRECLRRGLILELGGRHGSVVRFLPPLIITAEQIDEVAE 452

Query: 272 ALHDVLE 278
              + + 
Sbjct: 453 IFAEAVA 459

Length = 464

>gnl|CDD|236027 PRK07483, PRK07483, hypothetical protein; Provisional

 Score =  157 bits (399), Expect = 7e-45
 Identities = 96/301 (31%), Positives = 143/301 (47%), Gaps = 50/301 (16%)

Query: 12  FHGRTLAAISMSCDNEAIRG-FGPLL----------------PGHLKVDFGDITALE--- 51
           +HG TL A+++   N   R  F PLL                 G     +G   A E   
Sbjct: 132 YHGNTLGALAIG-GNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEA 190

Query: 52  KIFKESGDQIAGFLFEPIQGE-AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG 110
           KI +   D +A F+ E + G  AG + P  GY K +R++C +Y +L+I DE+  G+ R+G
Sbjct: 191 KILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTG 250

Query: 111 RMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG----EHGSTFGGNPLA 166
            + A + + V PD+V + K LG G  P+ AVLA   +   I  G    +HG T+ G+  A
Sbjct: 251 TLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATA 310

Query: 167 SAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPN--YVKEVRGRGLFNAVE--- 221
            A A+A   VI ++ L       GE+LR  L   +++     +V ++RGRGLF  VE   
Sbjct: 311 CAAALAVQRVIAEDGLLANVRARGEQLRARL---RERLGQHPHVGDIRGRGLFVGVELVA 367

Query: 222 -------FDKTALPVSAYDICLKMKERGILAKPTHDTI-------VRLTPPLSISSNELQ 267
                  FD  AL + A  I  +   RG++  P   TI       V L PP  I++ ++ 
Sbjct: 368 DRATKAPFDP-ALKLHA-RIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQID 425

Query: 268 E 268
           E
Sbjct: 426 E 426

Length = 443

>gnl|CDD|183999 PRK13360, PRK13360, omega amino acid--pyruvate transaminase; Provisional

 Score =  156 bits (396), Expect = 2e-44
 Identities = 94/297 (31%), Positives = 139/297 (46%), Gaps = 35/297 (11%)

Query: 12  FHGRTLAAISMSCDNEAIRGFGPLLPG--HLK------------------VDFGDITALE 51
           +HG     IS+       + FG LLPG  HL                    +  D   LE
Sbjct: 148 YHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELAD--ELE 205

Query: 52  KI-FKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG 110
           ++        IA  + EP+ G  GV+IPP GYL+ +R++C K+ IL+I DE+ +G  R G
Sbjct: 206 RLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLG 265

Query: 111 RMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-------HGSTFGGN 163
              A+ +  V PD++   K L  G IP+ AV    E+      G        HG T+ G+
Sbjct: 266 APFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGH 325

Query: 164 PLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223
           PLA A A+A+LD+   E L  R+A L       L  + +  P+ V ++R  GL  AVE  
Sbjct: 326 PLACAAALATLDLYEREGLLTRAARLAPYWEDALHSL-RDAPH-VIDIRNLGLVGAVELA 383

Query: 224 KTALPVS--AYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
                    AY++ LK  E+G++ + T D +  L+PPL I   ++ E    L   L+
Sbjct: 384 PRDGKPGKRAYEVFLKCFEKGLMIRYTGDILA-LSPPLIIEEAQIDELFDILAQALK 439

Length = 442

>gnl|CDD|181707 PRK09221, PRK09221, beta alanine--pyruvate transaminase; Provisional

 Score =  156 bits (396), Expect = 2e-44
 Identities = 81/226 (35%), Positives = 124/226 (54%), Gaps = 12/226 (5%)

Query: 61  IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV 120
           IA  + EP+ G AGV++PP GYL+ +R++C K+ IL+I DE+ +G  R G   A++   V
Sbjct: 219 IAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGV 278

Query: 121 RPDMVILGKALGGGVIPVSAVLADKEVM-LCIQPGE------HGSTFGGNPLASAVAIAS 173
            PD++   K L  G IP+ AV+A  E+    +Q  E      HG T+  +P+A A  +A+
Sbjct: 279 TPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLAT 338

Query: 174 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD--KTALPVSA 231
           LD+ R+E L ER+A L       +  ++   P+ V ++R  GL   +E      A     
Sbjct: 339 LDIYREEDLFERAAELAPYFEDAVHSLKGL-PH-VIDIRNIGLVAGIELAPRPGAPGARG 396

Query: 232 YDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           Y+  +K  E+G+L + T DTI  L+PPL I   ++ E   AL D L
Sbjct: 397 YEAFMKCFEKGLLVRYTGDTIA-LSPPLIIEKAQIDELVDALGDAL 441

Length = 445

>gnl|CDD|129792 TIGR00709, dat, 2,4-diaminobutyrate 4-transaminases

 Score =  155 bits (393), Expect = 4e-44
 Identities = 91/307 (29%), Positives = 146/307 (47%), Gaps = 36/307 (11%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG--------HLKVDFG-----DITALE 51
           ++S  G FHG T+ A++++ +  A    G L+PG          +  FG        A  
Sbjct: 131 VISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASI 190

Query: 52  KIFK------ESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 104
           + F+      ESG D+ A  + E IQGE GV+  P  +L+ +R++  K++I +I DE+Q+
Sbjct: 191 EYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQA 250

Query: 105 GLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNP 164
           G  RSG M A +   + PD V++ KA+GGG +P+ AVL         QP  H  TF GN 
Sbjct: 251 GFGRSGTMFAFEHAGIEPDFVVMSKAVGGG-LPL-AVLLIAPEFDAWQPAGHTGTFRGNQ 308

Query: 165 LASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF-- 222
           LA      +L+  +D+ LA+ +   GE +   L  + ++ P  +  VRGRGL   +    
Sbjct: 309 LAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHPC-IGNVRGRGLMQGIMIVD 367

Query: 223 -DKTALPVSAYDICLKMK--------ERGILAKP--THDTIVRLTPPLSISSNELQEGSK 271
             ++     AY    ++         E G+L +       + RL  P++I   E +EG  
Sbjct: 368 ERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVFRLLCPITIDQEECEEGIS 427

Query: 272 ALHDVLE 278
                +E
Sbjct: 428 RFKQAVE 434

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase [Central intermediary metabolism, Other]. Length = 442

>gnl|CDD|183486 PRK12381, PRK12381, bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

 Score =  153 bits (389), Expect = 9e-44
 Identities = 89/269 (33%), Positives = 134/269 (49%), Gaps = 14/269 (5%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGF 64
           IV+    FHGRTL  +S     +  + F PL P      + D+ +   +     DQ    
Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALID---DQTCAV 187

Query: 65  LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124
           + EPIQGE GVI     +L+ +R+LC ++N L+I DE+Q+G+ R+G + A     V PD+
Sbjct: 188 IVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDV 247

Query: 125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLA 183
           +   KALGGG  P+ A+L  ++    +  G HG+T+GGNPLASAVA   L++I   E L 
Sbjct: 248 LTTAKALGGG-FPIGAMLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLN 306

Query: 184 ---ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE 240
              +R     E L      I  ++  +  E+RG GL      +       A  I  +  +
Sbjct: 307 GVKQRHDWFVERLNT----INARYGLF-SEIRGLGLLIGCVLNA-EYAGKAKQISQEAAK 360

Query: 241 RGILAKPTHDTIVRLTPPLSISSNELQEG 269
            G++       +VR  P L+IS  E+  G
Sbjct: 361 AGVMVLIAGPNVVRFAPALNISEEEITTG 389

Length = 406

>gnl|CDD|236149 PRK08088, PRK08088, 4-aminobutyrate aminotransferase; Validated

 Score =  154 bits (390), Expect = 9e-44
 Identities = 88/281 (31%), Positives = 149/281 (53%), Gaps = 24/281 (8%)

Query: 10  GCFHGRTLAAISMSCD-NEAIRGFGPLLPGHL----------KVDFGD-ITALEKIFKES 57
           G +HGRT   ++++   N    G G L+PGH+           V   D I ++E+IFK  
Sbjct: 136 GAYHGRTHYTLALTGKVNPYSAGMG-LMPGHVYRALYPCPLHGVSEDDAIASIERIFKND 194

Query: 58  G--DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS 115
              + IA  + EP+QGE G       +++ +R LC ++ I++IADE+Q+G  R+G + A 
Sbjct: 195 AAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAM 254

Query: 116 DWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLD 175
           +   V  D+    K++ GG  P++ V    EVM  I PG  G T+ GNP+A A A+A L 
Sbjct: 255 EQMGVAADLTTFAKSIAGG-FPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLK 313

Query: 176 VIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF---DKTALPVSAY 232
           V   E L +++  LGE+L+  L  I ++ P  + +VRG G   A+E       + P +  
Sbjct: 314 VFEQENLLQKANALGEKLKDGLLAIAEKHPE-IGDVRGLGAMIAIELFEDGDHSKPNAKL 372

Query: 233 --DICLKMKERG--ILAKPTHDTIVRLTPPLSISSNELQEG 269
              I  + +++G  +L+   +  ++R+  PL+I   ++++G
Sbjct: 373 TAQIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQG 413

Length = 425

>gnl|CDD|236437 PRK09264, PRK09264, diaminobutyrate--2-oxoglutarate aminotransferase; Validated

 Score =  153 bits (389), Expect = 2e-43
 Identities = 95/294 (32%), Positives = 154/294 (52%), Gaps = 26/294 (8%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRG--FGPL-----LP--GHLKVDFGDITALEKIFK 55
           IV+    FHG TL +++++  N   R     PL     +P  G+   D   +  LEK+ +
Sbjct: 132 IVAFTNGFHGMTLGSLAVT-GNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLE 190

Query: 56  ESG---DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM 112
           +S    D  A  + E +QGE G+ +    +L+ +  LC K++IL+I D+IQ+G  R+G  
Sbjct: 191 DSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTF 250

Query: 113 LASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCI-QPGEHGSTFGGNPLASAVAI 171
            + +   + PD+V L K++ G  +P++ VL   E  L + +PGEH  TF GN LA   A 
Sbjct: 251 FSFERAGITPDIVTLSKSISGYGLPMALVLIKPE--LDVWKPGEHNGTFRGNNLAFVTAT 308

Query: 172 ASLDVI-RDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVS 230
           A+L+    D+   +     GE +R+ L +I  ++P    EVRGRG+   ++F    L   
Sbjct: 309 AALEEYWSDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGDGEL--- 365

Query: 231 AYDICLKMKERGILAKP--THDTIVRLTPPLSISSNELQEG----SKALHDVLE 278
           A  I  +  E G++ +     D +V+L PPL+I   EL+EG     +A+ +VL 
Sbjct: 366 AGKIAAEAFENGLIIETSGPEDEVVKLLPPLTIDEEELEEGLDILEEAVAEVLA 419

Length = 425

>gnl|CDD|235889 PRK06931, PRK06931, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

 Score =  153 bits (389), Expect = 3e-43
 Identities = 98/304 (32%), Positives = 155/304 (50%), Gaps = 50/304 (16%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF--------------GD--IT 48
           ++S  G +HG T  A++++ +         L+PG   V F              G+  + 
Sbjct: 150 VISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPG---VQFMPYPHEYRCPLGIGGEAGVK 206

Query: 49  ALEKIFK------ESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 101
           AL   F+      ESG  + A  + E IQGE GV   P  +L+ +R++  K+ IL+I DE
Sbjct: 207 ALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDE 266

Query: 102 IQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG 161
           +Q+G AR+G+M A +   + PD++++ KA+GGG +P+ AVL  K+     QPG H  TF 
Sbjct: 267 VQAGFARTGKMFAFEHAGIEPDIIVMSKAVGGG-LPL-AVLGIKKEFDAWQPGGHTGTFR 324

Query: 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 221
           GN LA A  + +L ++++E LA+ +A  GE L+  L ++Q+++P  +  VRGRGL   +E
Sbjct: 325 GNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYP-CIGNVRGRGLMIGIE 383

Query: 222 F-------DKTA-------LPVSAYDICLKMK---ERGILAKPTHDTIVRLTPPLSISSN 264
                   D          L  +    C +     ERG      +  +VRL PPL I+  
Sbjct: 384 IVDERQPADAMGSYPADGELAAAIQKACFENGLLLERG----GRNGNVVRLLPPLLITQA 439

Query: 265 ELQE 268
           E +E
Sbjct: 440 ECEE 443

Length = 459

>gnl|CDD|233853 TIGR02407, ectoine_ectB, diaminobutyrate--2-oxoglutarate aminotransferase

 Score =  150 bits (381), Expect = 2e-42
 Identities = 91/289 (31%), Positives = 150/289 (51%), Gaps = 20/289 (6%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR--GFGPL-----LP--GHLKVDFGDITALEKIFK 55
           +VS    FHG TL ++S++  N   R     PL     +P  G+L  D   I   EK+ +
Sbjct: 128 VVSFTNAFHGMTLGSLSVT-GNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLE 186

Query: 56  ESG---DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM 112
           +S    D  A  + E +QGE G+ +  D +L+ +  LC +++IL+I D+IQ+G  R+G  
Sbjct: 187 DSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTF 246

Query: 113 LASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIA 172
            + +   + PD+V L K++ G  +P++  L   E +   +PGEH  TF GN LA   A A
Sbjct: 247 FSFEPAGIEPDIVCLSKSISGYGLPLALTLIKPE-LDVWKPGEHNGTFRGNNLAFVTATA 305

Query: 173 SLDVI-RDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSA 231
           +L+    D+   +      E +++ L +I  ++P  +K+VRGRGL   +E     L   A
Sbjct: 306 ALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGDGDL---A 362

Query: 232 YDICLKMKERGILAKPT--HDTIVRLTPPLSISSNELQEGSKALHDVLE 278
             I     E G++ + +  +D +++L PPL+I    LQ+G   L   +E
Sbjct: 363 GKIAKAAFENGLIIETSGPNDEVIKLLPPLTIDEETLQQGLDILEQAVE 411

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore (SP|Q9Z3R2) or 1,3-diaminopropane (SP|P44951) biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance [Cellular processes, Adaptations to atypical conditions]. Length = 412

>gnl|CDD|168145 PRK05639, PRK05639, 4-aminobutyrate aminotransferase; Provisional

 Score =  150 bits (379), Expect = 6e-42
 Identities = 94/308 (30%), Positives = 168/308 (54%), Gaps = 39/308 (12%)

Query: 5   IVSCCGCFHGRTLAAISM-SCDNEAIRGFGPLLPGHLKVDFGD-------ITALEK---- 52
           I++  G +HG+TL A S+ +  +   RGF PL+P  + + + +       I   E+    
Sbjct: 142 ILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDEL 201

Query: 53  -----------IFKE--SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99
                      +F      D++A    EPIQG+AG+++PP+ + K ++ L  ++ IL++ 
Sbjct: 202 INRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVM 261

Query: 100 DEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGST 159
           DE+Q+G+ R+G+  AS+W EV+PD++I GK +  G + +S V+  KE+M  +  G    T
Sbjct: 262 DEVQTGIGRTGKWFASEWFEVKPDLIIFGKGVASG-MGLSGVIGRKELMD-LTSGSALLT 319

Query: 160 FGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA 219
              NP+ SA A A+L++I +E L + +  +GE +++ L ++++ F   + +VRG+GL   
Sbjct: 320 PAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESF-EVIGDVRGKGLMIG 378

Query: 220 VEFDKTAL---PVSAYDICLKMKERGILAKPTH---DTIVRLTPPLSISSNELQEG---- 269
           VE  K      P     IC +  E G++  P++     ++R+TPPL I+    ++G    
Sbjct: 379 VEIVKENGKPDPELTGKICWRAFELGLIL-PSYGMFGNVIRITPPLVITKEIAEKGLEIM 437

Query: 270 SKALHDVL 277
            +A+ D L
Sbjct: 438 ERAIKDAL 445

Length = 457

>gnl|CDD|181189 PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

 Score =  148 bits (376), Expect = 1e-41
 Identities = 96/289 (33%), Positives = 143/289 (49%), Gaps = 32/289 (11%)

Query: 12  FHGRTLAAISMSCD-----NEAIRGFGPLLPGHLKVD-----FG------DITALEKIFK 55
           +HG T  A+S+ CD     +   +G+   LP +L        F       DI    ++  
Sbjct: 144 YHGDTFGAMSV-CDPDNSMHSLYKGY---LPENLFAPAPQSRFDGEWDERDIAPFARLMA 199

Query: 56  ESGDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA 114
               +IA  + EPI QG  G+ I    +LK VR LC +  IL+IADEI +G  R+G++ A
Sbjct: 200 AHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFA 259

Query: 115 SDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-----HGSTFGGNPLASAV 169
            +   + PD++ LGKAL GG + +SA L  +EV   I  GE     HG TF GNPLA AV
Sbjct: 260 CEHAGIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAV 319

Query: 170 AIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPV 229
           A ASL ++      ++ A +  +LR+ L  ++      V +VR  G    VE   T  PV
Sbjct: 320 ANASLSLLESGDWQQQVAAIEAQLREELAPLRDA--PMVADVRVLGAIGVVE---TTRPV 374

Query: 230 SAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           +   +     E+G+  +P    I  L PP  I   +LQ  + A++  ++
Sbjct: 375 NMAALQRFFVEQGVWIRPFGKLIY-LMPPYIILPEQLQRLTAAVNRAVQ 422

Length = 428

>gnl|CDD|180994 PRK07480, PRK07480, putative aminotransferase; Validated

 Score =  148 bits (376), Expect = 2e-41
 Identities = 86/247 (34%), Positives = 131/247 (53%), Gaps = 29/247 (11%)

Query: 43  DFGDITA--LEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99
           +FG   A  LE    E G D +A F+ EPIQG  GVIIPP  Y   ++ +C KY+IL++A
Sbjct: 199 EFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVA 258

Query: 100 DEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV--MLCIQPGE-- 155
           DE+  G  R+G    S    ++PD++ + K L  G IP+ AV     V  +L  + GE  
Sbjct: 259 DEVICGFGRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFN 318

Query: 156 HGSTFGGNPLASAVAIASLDVIRDEKLAER-SAHLGEELRQHLFKIQQQFPNY--VKEVR 212
           HG T+ G+P+A+AVA+A+L ++RDE + ER     G  L++ L    ++  ++  V EVR
Sbjct: 319 HGFTYSGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRL----RELADHPLVGEVR 374

Query: 213 GRGLFNAVEFDKTALPVSAY-----------DICLKMKERGILAKPTHDTIVRLTPPLSI 261
           G GL  A+E  K       +           D C      G++ +   D ++ ++PPL I
Sbjct: 375 GVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFA---NGLIMRAVGDRMI-ISPPLVI 430

Query: 262 SSNELQE 268
           +  E+ E
Sbjct: 431 THAEIDE 437

Length = 456

>gnl|CDD|223080 COG0001, HemL, Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

 Score =  145 bits (368), Expect = 2e-40
 Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 19/206 (9%)

Query: 4   IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH--------LKVDFGDITALEKIFK 55
            I+   GC+HG + + +  +    A  G  P  PG         L + + D+ ALE+ F+
Sbjct: 137 KIIKFEGCYHGHSDSLLVKAGSGAATLG-SPSSPGVPADVAKHTLVLPYNDLEALEEAFE 195

Query: 56  ESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG--LARSGRML 113
           E GD IA  + EP+ G  GV+ P  G+L+ +R+L  ++  L+I DE+ +G  +A  G   
Sbjct: 196 EYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGG--- 252

Query: 114 ASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE---HGSTFGGNPLASAVA 170
           A  +  V PD+  LGK +GGG+ P+ A     E+M  + P        T  GNPLA A  
Sbjct: 253 AQGYYGVEPDLTTLGKIIGGGL-PIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAG 311

Query: 171 IASLDVI-RDEKLAERSAHLGEELRQ 195
           +A+L+ +  +E + ER   LGE L +
Sbjct: 312 LATLEELMTEEGVYERLDALGERLAE 337

Length = 432

>gnl|CDD|180426 PRK06148, PRK06148, hypothetical protein; Provisional

 Score =  146 bits (371), Expect = 2e-39
 Identities = 77/217 (35%), Positives = 115/217 (52%), Gaps = 11/217 (5%)

Query: 55  KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-ML 113
              G   A F+ E I   AG I  P+GYL+ V  +      + IADE+Q G  R G    
Sbjct: 779 AAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWW 838

Query: 114 ASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG-EHGSTFGGNPLASAVAIA 172
           A + + V PD+V +GK +G G  P+ AV+  +E+      G E+ +TFGGNP++ A+ +A
Sbjct: 839 AFETQGVVPDIVTMGKPIGNGH-PMGAVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLA 897

Query: 173 SLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF---DKTALPV 229
            LD+I DE L   +  +G  L   L ++Q +F   + +VRG GLF  +E     KT  P 
Sbjct: 898 VLDIIEDEDLQRNALEIGNYLLAGLRELQDRFD-IIGDVRGMGLFLGIELVTDRKTKAPA 956

Query: 230 S--AYDICLKMKERGIL--AKPTHDTIVRLTPPLSIS 262
           +  A  +    +ERGIL   +  HD ++++ PPL  S
Sbjct: 957 TAIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFS 993

Length = 1013

>gnl|CDD|180401 PRK06105, PRK06105, aminotransferase; Provisional

 Score =  142 bits (360), Expect = 5e-39
 Identities = 97/307 (31%), Positives = 149/307 (48%), Gaps = 47/307 (15%)

Query: 12  FHGRTLAAISMSCDNEAIRGFG-PL---------------LPGHLKVDFGDITA--LEK- 52
           +HG T+A+ S++      R F  PL               LPG  +  F    A  LE  
Sbjct: 151 YHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEAL 210

Query: 53  IFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM 112
           I  E  D IA F+ EP+ G  GVI+PP  Y + ++ +  KY+IL++ADE+  G  R+G M
Sbjct: 211 ILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNM 270

Query: 113 LASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCI--QPGE-----HGSTFGGNPL 165
              +   ++PD++++ K L     P+SAVL +++V   I  + G+     HG T  G+P+
Sbjct: 271 FGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPV 330

Query: 166 ASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF--D 223
           A+AVA+ +L +I +  L   +A  G  L+  L  +    P  V EVRG GL  AVE   D
Sbjct: 331 AAAVALENLAIIEERDLVGNAAERGARLQARLRALADH-P-LVGEVRGVGLIAAVELVAD 388

Query: 224 KT---------ALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEG----S 270
           K           +   A        E G++++   DT+    PPL I++ ++ E      
Sbjct: 389 KATKTPFEPPGKVGARANAAAH---EHGVISRAMGDTLA-FCPPLIITAAQVDEMVDRFG 444

Query: 271 KALHDVL 277
           +AL DV 
Sbjct: 445 RALDDVA 451

Length = 460

>gnl|CDD|180441 PRK06173, PRK06173, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

 Score =  140 bits (355), Expect = 1e-38
 Identities = 90/287 (31%), Positives = 140/287 (48%), Gaps = 30/287 (10%)

Query: 12  FHGRTLAAISMSCDNEAIRGFGPLLPGHL---------KVDFG------DITALEKIFKE 56
           +HG T  A+S+ CD   + G   L    L          + FG       I  L+ + ++
Sbjct: 146 YHGDTWHAMSV-CD--PVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQ 202

Query: 57  SGDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS 115
            GD+IA  + EP+ QG  G+      YL   R+LC +Y +L+I DEI +G  R+G++ A 
Sbjct: 203 KGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFAL 262

Query: 116 DWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-----HGSTFGGNPLASAVA 170
           +   V PD++ +GKAL GG + +SA +  + +   I  GE     HG TF  NPLA A+A
Sbjct: 263 EHAGVVPDIMCIGKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIA 322

Query: 171 IASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVS 230
             S+ ++ +    +    +  +L+Q L     +F   V EVR  G    VE  +   PV+
Sbjct: 323 AESIRLLLESPWQQNIQRIEAQLKQEL-APAAEFD-SVAEVRVLGAIGVVEMKE---PVN 377

Query: 231 AYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
              +  +  E GI  +P    +V + PP  IS +EL + +  L  VL
Sbjct: 378 MATLQPRFVEHGIWVRP-FGKLVYIMPPFIISPDELSQLTSGLLRVL 423

Length = 429

>gnl|CDD|235913 PRK07036, PRK07036, hypothetical protein; Provisional

 Score =  139 bits (351), Expect = 1e-37
 Identities = 82/255 (32%), Positives = 124/255 (48%), Gaps = 22/255 (8%)

Query: 43  DFGDITALE---KIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99
            F D    E   KI     D IA F+ EPI G  GVI+PP GY   +R++C +Y+IL I+
Sbjct: 200 AFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYIS 259

Query: 100 DEIQSGLARSGRMLAS-DWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQ----PG 154
           DE+ +G  R G   AS     ++PD++   K L  G  P+ AV+  + ++  I      G
Sbjct: 260 DEVVTGFGRLGHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAKG 319

Query: 155 E---HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEV 211
               HG T+ G+P+A A A+ +++++  E L E    +G    + L  + ++ P  V +V
Sbjct: 320 NVFTHGFTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASL-RELP-LVGDV 377

Query: 212 RGRGLFNAVEF-----DKTALPVS---AYDICLKMKERGILAKPTHDTIVRLTPPLSISS 263
           RG  L   VE       K  LP        I    +ERG+L +P     V L+PPL I+ 
Sbjct: 378 RGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLEHLCV-LSPPLIITR 436

Query: 264 NELQEGSKALHDVLE 278
            ++ E    L   +E
Sbjct: 437 AQIDEIVAILRAAIE 451

Length = 466

>gnl|CDD|235823 PRK06541, PRK06541, hypothetical protein; Provisional

 Score =  135 bits (343), Expect = 1e-36
 Identities = 85/306 (27%), Positives = 129/306 (42%), Gaps = 46/306 (15%)

Query: 12  FHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD----------------FGDITA---LEK 52
           +HG T  A++++        F PL+PG  +V                 FG   A    E 
Sbjct: 154 YHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEA 213

Query: 53  IFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM 112
           I  E  D +A    EP+Q   G   PP GY + VR++C +Y++L+++DE+     R G M
Sbjct: 214 IEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEM 273

Query: 113 LASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE----HGSTFGGNPLASA 168
              +     PD++   K +  G  P+ A++A   +      G     HG TFGG+P+++A
Sbjct: 274 FGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAA 333

Query: 169 VAIASLDVIRDEKLAER----SAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF-- 222
           VA+A+LD+   E L +            L + L       P  V +VRG G F  +E   
Sbjct: 334 VALANLDIFEREGLLDHVRDNEPAFRATLEKLL-----DLP-IVGDVRGDGYFYGIELVK 387

Query: 223 DKTALPVSAYDICL---------KMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSK 271
           DK        D             + E G+  +     D +V+L PPL     E  E  +
Sbjct: 388 DKATKETFTDDESERLLRGFLSPALFEAGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQ 447

Query: 272 ALHDVL 277
            L  VL
Sbjct: 448 ILRSVL 453

Length = 460

>gnl|CDD|236026 PRK07482, PRK07482, hypothetical protein; Provisional

 Score =  133 bits (337), Expect = 8e-36
 Identities = 82/247 (33%), Positives = 126/247 (51%), Gaps = 20/247 (8%)

Query: 50  LEK-IFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 108
           LE+ I  E  D IA F+ EP+ G  G++ PP GY  A++ +  KY+IL+IADE+ +G  R
Sbjct: 209 LEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGR 268

Query: 109 SGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-------HGSTFG 161
            G M  SD   + PD++ + K L     P+S  +  ++V   ++ G        HG T+ 
Sbjct: 269 LGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYS 328

Query: 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 221
           G+P+ +A A+A+LD++  E L   +A +G   R  L       P  V EVRG G+  AVE
Sbjct: 329 GHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPL-VGEVRGVGMLAAVE 387

Query: 222 F-----DKT----ALPVSAYDICLKMKERGILAKPT-HDTIVRLTPPLSISSNELQEGSK 271
           F     D+T    AL +    +     ERG++A+   H  I+   PPL ++  E  E   
Sbjct: 388 FVADRDDRTPFDPALKIGP-QVSAAALERGVIARAMPHGDILGFAPPLVLTRAEADEIVA 446

Query: 272 ALHDVLE 278
              D ++
Sbjct: 447 IAKDAVD 453

Length = 461

>gnl|CDD|215405 PLN02760, PLN02760, 4-aminobutyrate:pyruvate transaminase

 Score =  133 bits (337), Expect = 1e-35
 Identities = 93/301 (30%), Positives = 138/301 (45%), Gaps = 57/301 (18%)

Query: 12  FHGRTLAAISMSCDNEAIRGF---GPL-------------LPGHLKVDFGDITA--LEK- 52
           +HG TL + S+S      + F    P              LPG  + +F    A  LE  
Sbjct: 193 YHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENL 252

Query: 53  IFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM 112
           I KE  + IA F+ EP+ G  GVI PP  Y + ++ +  KY+IL IADE+     R G M
Sbjct: 253 ILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTM 312

Query: 113 LASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-------HGSTFGGNPL 165
              D   ++PD+V L KAL    +P+ AVL   E+   I           HG T+ G+P+
Sbjct: 313 FGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPV 372

Query: 166 ASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVK---------EVRGRGL 216
           + AVA+ +L + ++  + E           H+ KI  +F + +K         E+RG GL
Sbjct: 373 SCAVALEALKIYKERNIPE-----------HVNKIAPRFQDGIKAFSGSPIIGEIRGTGL 421

Query: 217 FNAVEFDKTALP---------VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQ 267
               EF     P         V AY    + K+RG+L +   D I+ ++PPL I+  E+ 
Sbjct: 422 ILGTEFVDNKSPNDPFPAEWGVGAY-FGAECKKRGMLVRVAGDNIM-MSPPLIITPEEVD 479

Query: 268 E 268
           E
Sbjct: 480 E 480

Length = 504

>gnl|CDD|236224 PRK08297, PRK08297, L-lysine aminotransferase; Provisional

 Score =  130 bits (330), Expect = 7e-35
 Identities = 82/257 (31%), Positives = 122/257 (47%), Gaps = 37/257 (14%)

Query: 43  DFGDITALEK--------IFKESGDQIAGFLFEPIQGEAGVIIPPDG-----YLKAVRDL 89
           D  ++ ALE          F+     IA F+ EPIQGE G     D      +  A+R+L
Sbjct: 200 DLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGG-----DNHFRPEFFAAMREL 254

Query: 90  CSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVML 149
           C +++ L+I DE+Q+G+  +G   A     VRPD+V  GK        V  ++A + V  
Sbjct: 255 CDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKKT-----QVCGIMAGRRVDE 309

Query: 150 C-----IQPGEHGSTFGGNPLASAV-AIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQ 203
                        ST+GGN L   V A   L+VI ++ L E +A  GE L   L ++  +
Sbjct: 310 VEDNVFAVSSRINSTWGGN-LVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAE 368

Query: 204 FPNYVKEVRGRGLFNAVEFDKTALPVSAY--DICLKMKERGILAKPTHDTIVRLTPPLSI 261
           FP  V  VRGRGL  A  FD   LP +A   ++  ++ E G+L  P  +  +R  P L++
Sbjct: 369 FPAVVSNVRGRGLMCA--FD---LPTTADRDEVIRRLWEEGVLVLPCGERSIRFRPALTV 423

Query: 262 SSNELQEGSKALHDVLE 278
           ++ E+     AL   L 
Sbjct: 424 TTEEIDAAIDALRRALP 440

Length = 443

>gnl|CDD|132295 TIGR03251, LAT_fam, L-lysine 6-transaminase

 Score =  129 bits (325), Expect = 2e-34
 Identities = 81/294 (27%), Positives = 132/294 (44%), Gaps = 38/294 (12%)

Query: 10  GCFHGRTLAAISMS-----------------CDNEAIRGFGPLLPGHLKVDFGDITAL-- 50
             FHGR+   +S++                  DN  +  F    P   +V   +  AL  
Sbjct: 149 QAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLT-FPLDAPNLDQVIALEEEALRQ 207

Query: 51  -EKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS 109
               F E    IA F+ EPIQGE G       +L+A+R LC +++ L+I DE+Q+G+  +
Sbjct: 208 ARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLT 267

Query: 110 GRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV-----MLCIQPGEHGSTFGGNP 164
           G   A     V+PD+V  GK        V  ++A + V      +   P    ST+GGN 
Sbjct: 268 GTAWAYQQLGVQPDIVAFGKK-----TQVCGIMAGRRVDEVADNVFAVPSRLNSTWGGNL 322

Query: 165 LASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK 224
           +    A   L++I +E+L + +   G  L   L ++  +FP+ V   RGRGL  A +   
Sbjct: 323 VDMVRATRILEIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFD--- 379

Query: 225 TALPVSAY--DICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDV 276
             LP +A   ++  ++   G+L     +  +R  PPL+++  E+     A+  V
Sbjct: 380 --LPSTADRDEVIRQLYREGVLLLGCGERSIRFRPPLTVTREEIDAAIDAIRRV 431

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites. Length = 431

>gnl|CDD|234607 PRK00062, PRK00062, glutamate-1-semialdehyde aminotransferase; Provisional

 Score =  128 bits (325), Expect = 3e-34
 Identities = 59/169 (34%), Positives = 96/169 (56%), Gaps = 21/169 (12%)

Query: 40  LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99
           L   + D+ A+E++F+E GD+IA  + EP+ G  GV+ P  G+L+ +R+LC ++  L+I 
Sbjct: 177 LTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIF 236

Query: 100 DEIQSG--LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP---- 153
           DE+ +G  +A  G   A  +  V PD+  LGK +GGG +PV A    +E+M  + P    
Sbjct: 237 DEVMTGFRVALGG---AQGYYGVTPDLTTLGKIIGGG-LPVGAFGGRREIMEQLAPLGPV 292

Query: 154 ---GEHGSTFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQ 195
              G    T  GNPLA A  +A+L ++++    E+L   +  L E L++
Sbjct: 293 YQAG----TLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKE 337

Length = 426

>gnl|CDD|233100 TIGR00713, hemL, glutamate-1-semialdehyde-2,1-aminomutase

 Score =  128 bits (323), Expect = 4e-34
 Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 18/208 (8%)

Query: 3   AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH--------LKVDFGDITALEKIF 54
             I+   GC+HG   A +  +    A  G  P  PG         L + + D+ ALE++F
Sbjct: 131 DKIIKFEGCYHGHHDALLVKAGSGAATLGL-PTSPGVPEDFAKLTLVLPYNDLEALEEVF 189

Query: 55  KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG--LARSGRM 112
           +E G++IAG + EP+ G  GV+ P   +L  +R L  +Y  L+I DE+ +G  +A  G  
Sbjct: 190 EEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGG-- 247

Query: 113 LASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP-GE--HGSTFGGNPLASAV 169
            A ++  V PD+  LGK +GGG +PV A    +E+M  + P G      T  GNPLA A 
Sbjct: 248 -AQEYFGVEPDLTTLGKIIGGG-LPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAA 305

Query: 170 AIASLDVIRDEKLAERSAHLGEELRQHL 197
            +A+L ++ +E +      L + L + L
Sbjct: 306 GLATLKLLDEEGVYTELDELAKRLAEGL 333

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 423

>gnl|CDD|180330 PRK05965, PRK05965, hypothetical protein; Provisional

 Score =  128 bits (324), Expect = 6e-34
 Identities = 80/253 (31%), Positives = 121/253 (47%), Gaps = 24/253 (9%)

Query: 47  ITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 105
           + AL     E G D +A F  EPIQG  GVI+PP G+LKA+R+ C +  IL +ADE+ +G
Sbjct: 201 VAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITG 260

Query: 106 LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-------HGS 158
             R+G + A + E V PD++ + K L  G +P+ AVL    V   I  G        HG 
Sbjct: 261 FGRTGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGY 320

Query: 159 TFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 218
           T+  +P+++AV +  L +  +  L       G      L  ++   P  V +VRGRGL  
Sbjct: 321 TYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALRAH-P-LVGDVRGRGLLG 378

Query: 219 AVEF-----DKTALPVSAYDICLKMKER----GILAKPTHDTIVRLTPPLSISSNE---- 265
           A+E       KT    +  D   ++ +R    G++ +   D ++   P L  +  E    
Sbjct: 379 ALELVADKATKTPFDAAL-DPADRIFDRAYANGLVFRAFGDGVLGFAPALCCTEGEFDLI 437

Query: 266 LQEGSKALHDVLE 278
            +   K L DVL 
Sbjct: 438 FERTRKTLDDVLA 450

Length = 459

>gnl|CDD|171472 PRK12403, PRK12403, putative aminotransferase; Provisional

 Score =  124 bits (314), Expect = 1e-32
 Identities = 85/288 (29%), Positives = 141/288 (48%), Gaps = 34/288 (11%)

Query: 12  FHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD---------------FGDITAL---EKI 53
           +HG TLAA ++    + +   G L+P    +D               FG   AL   EKI
Sbjct: 157 YHGSTLAATALG-GMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKI 215

Query: 54  FKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 113
            +   + +AGF+ EP QG  G+I PP+ Y   ++ +C +Y++L+ ADE+  G  R+G   
Sbjct: 216 LELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWF 275

Query: 114 ASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV--MLCIQPG--EHGSTFGGNPLASAV 169
           A +     PD + + K L  G +P+  ++  K +   L  Q G   HG T+ G+P+A+AV
Sbjct: 276 AHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAV 335

Query: 170 AIASLDVIRDEKLAERSAH-LGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP 228
           AIA+L  +RDE +  R     G  L++ L ++    P  V EV+G GL  A++F +    
Sbjct: 336 AIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHP-LVGEVQGAGLVAALQFAEDKAT 394

Query: 229 VSAY----DICLKMK----ERGILAKPTHDTIVRLTPPLSISSNELQE 268
              +    D+  + +    E G++ + T   ++ + P L     E+ E
Sbjct: 395 RKRFANENDLAWRCRTIGFEEGVIIRSTLGRMI-MAPALVAGRAEIDE 441

Length = 460

>gnl|CDD|180800 PRK07030, PRK07030, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

 Score =  114 bits (287), Expect = 7e-29
 Identities = 88/291 (30%), Positives = 134/291 (46%), Gaps = 42/291 (14%)

Query: 12  FHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIF 54
           +HG TLAA+S+         + PLL   +KV   D                    +E+  
Sbjct: 149 YHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTL 208

Query: 55  KESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 113
            E  D+IA  + EP IQG  G+ +    YLK +R+ C +Y + +I DEI  G  R+G M 
Sbjct: 209 AEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMF 268

Query: 114 ASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC-------IQPGEHGSTFGGNPLA 166
           A +   +RPD + L KAL GG +P++AVL    V          ++   H  ++ GNPLA
Sbjct: 269 ACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLA 328

Query: 167 SAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF---- 222
            A A+A+LD+   + + E +  L   + +    +    P+ V EVR  G+  A+E     
Sbjct: 329 CAAALATLDIFEQDNVIENNRALARRMAEATAHLADH-PH-VAEVRQTGMILAIEMVQDK 386

Query: 223 -DKTALP------VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNEL 266
             KT  P      +  Y   L   ERG L +P   ++V   PP  I+  ++
Sbjct: 387 ASKTPYPWQERRGLKVYQHAL---ERGALLRPL-GSVVYFLPPYVITPEQI 433

Length = 466

>gnl|CDD|235716 PRK06149, PRK06149, hypothetical protein; Provisional

 Score =  113 bits (286), Expect = 3e-28
 Identities = 75/227 (33%), Positives = 119/227 (52%), Gaps = 18/227 (7%)

Query: 48  TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 107
             LE++   SG  +AGF+ EP+ G AG I  P GYL+ V         + IADE+Q G  
Sbjct: 733 AQLEEL-DASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYG 791

Query: 108 RSGRMLASDW--EE--VRPDMVILGKALGGGVIPVSAVLADKEVMLCI-QPGEHGSTFGG 162
           R G      W  E+  V PD++ + K +G G  P+ AV+  +E+   +   G   S+ GG
Sbjct: 792 RLGHYF---WGFEQQGVVPDIITMAKGMGNGH-PLGAVITRREIAEALEAEGYFFSSTGG 847

Query: 163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 222
           +P++  + +A LDV+R+EKL E +  +G+ L+  L  +  + P  +  V G GL+  VE 
Sbjct: 848 SPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHP-LIGAVHGMGLYLGVEL 906

Query: 223 --DKTAL---PVSAYDICLKMKERGILAKPT--HDTIVRLTPPLSIS 262
             D+  L         IC ++ E G++ +PT  H  I+++ PPL + 
Sbjct: 907 VRDRQTLEPATEETAAICDRLLELGVIMQPTGDHLNILKIKPPLCLD 953

Length = 972

>gnl|CDD|236336 PRK08742, PRK08742, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

 Score =  108 bits (272), Expect = 9e-27
 Identities = 81/290 (27%), Positives = 135/290 (46%), Gaps = 41/290 (14%)

Query: 12  FHGRTLAAISMSCDNEAIRGFGPLL---------------PGHLKVDFGDITA--LEKIF 54
           +HG T+ A+++       R + PLL               PG    D+    A  L+ +F
Sbjct: 171 YHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALF 230

Query: 55  KESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 113
           ++S  +I   + EP +Q   G+ +    YL+  R+LC  +   +IADEI +G  R+G + 
Sbjct: 231 EQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLF 290

Query: 114 ASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE------HGSTFGGNPLAS 167
           A +   V PD++ L K L GG +P+SAVLA +++              H  ++ GNPLA 
Sbjct: 291 ACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLAC 350

Query: 168 AVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE------ 221
           A A+A+LD+  D+ +  R+      + Q   +I +    +V +VR  G+  A E      
Sbjct: 351 AAALATLDIFADDDVIARNQPTAARMTQLAAQIGEH--PHVADVRQAGMVVAFELTRGGN 408

Query: 222 ----FDKTA-LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNEL 266
               F   A + + AY   L    RG++ +P  D ++   PP  +   +L
Sbjct: 409 KRTPFPPAARVGLHAYRAALA---RGVVLRPLGD-VLYWMPPYCVDEAQL 454

Length = 472

>gnl|CDD|180174 PRK05630, PRK05630, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

 Score =  105 bits (263), Expect = 1e-25
 Identities = 83/290 (28%), Positives = 129/290 (44%), Gaps = 33/290 (11%)

Query: 10  GCFHGRTLAAISMSCDNE-----------AIRGFGPLLPGHLKVDFGDITALEKIFKES- 57
             +HG T AA+S+ CD E             + F P  P    V       + +  +   
Sbjct: 140 SGYHGDTFAAMSV-CDPEGGMHSLWKGTLPEQIFAPAPP----VRGSSPQEISEYLRSLE 194

Query: 58  ---GDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 113
               + +A  + EPI QG  G+       ++ VR LC K++IL+IADEI +G  R+G + 
Sbjct: 195 LLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELF 254

Query: 114 ASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE------HGSTFGGNPLAS 167
           A+    V PD++ +GKAL GG +  +A L   +V   I          HG TF  NPLA 
Sbjct: 255 ATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLAC 314

Query: 168 AVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL 227
           AVA ASL++I      ++   +  EL   L  +       V +VR  G    VE ++   
Sbjct: 315 AVAHASLEIIETGMWRKQVKRIEAELIAGLSPLAHL--PGVADVRVLGAIGVVEMEQ--- 369

Query: 228 PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           PV   +      + G+  +P    +V + PP   +S ++ +   AL   +
Sbjct: 370 PVDMEEATQAAVDHGVWLRP-FGRLVYVMPPYITTSEQIAQICAALAAAV 418

Length = 422

>gnl|CDD|235894 PRK06943, PRK06943, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

 Score =  105 bits (263), Expect = 1e-25
 Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 16/241 (6%)

Query: 49  ALEKIFKESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 107
            + ++F E   +IA  + EP +Q  AG+ +    YL+ +R LC +Y + +IADEI  G  
Sbjct: 210 DVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCG 269

Query: 108 RSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE------HGSTFG 161
           R+G   A +   V PD + L K + GG +P+S VL+   +       +      H  ++ 
Sbjct: 270 RTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYT 329

Query: 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 221
           GNPLA   A+A+LD+  ++ +  R+A     LR  L  +       V+ +R RG   A  
Sbjct: 330 GNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLAAHPQ--VRHLRQRGTIFA-- 385

Query: 222 FDKTALPVSAYDIC----LKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           FD      +A            ER +L +P   T V L PP  +  +E+   ++     L
Sbjct: 386 FDVALDGDAARTFSRRFFEAALERELLLRPIGTT-VYLMPPYVLDDDEIAWLAERTRATL 444

Query: 278 E 278
           +
Sbjct: 445 D 445

Length = 453

>gnl|CDD|234803 PRK00615, PRK00615, glutamate-1-semialdehyde aminotransferase; Provisional

 Score =  102 bits (256), Expect = 9e-25
 Identities = 59/189 (31%), Positives = 96/189 (50%), Gaps = 12/189 (6%)

Query: 2   QAIIVSCCGCFHGRT---LAAISMSCDN----EAIRGFGPLLPGHLKVDFGDITALEKIF 54
           ++II+   GC+HG     L  IS S  +      +       P  L + + D    + + 
Sbjct: 136 RSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVM 195

Query: 55  KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA 114
              G ++AG +FEPI    GV++P  G+++ +   C +   L I DE+ +G  R  +  A
Sbjct: 196 NSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGA 254

Query: 115 SDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP-GE--HGSTFGGNPLASAVAI 171
           +    V+PD+ + GK LGGG +P +AV+A K +M  + P G      T  GNPLA A   
Sbjct: 255 AAIYHVKPDITVYGKILGGG-LPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGK 313

Query: 172 ASLDVIRDE 180
           AS+++ R++
Sbjct: 314 ASINLCREQ 322

Length = 433

>gnl|CDD|183493 PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase; Provisional

 Score = 96.2 bits (240), Expect = 2e-22
 Identities = 67/216 (31%), Positives = 100/216 (46%), Gaps = 34/216 (15%)

Query: 5   IVSCCGCFHGR-------------TL-----AAISMSCDNEAIRGFGPLLPGHLKVDFGD 46
           I+   GC+HG              TL     A +  S   E I            V F D
Sbjct: 138 IIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVI-----------TVPFND 186

Query: 47  ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 106
           I AL++   + GD++A  L EPI G  G++ P  G+L+AV +L  +   L+I DE+ +  
Sbjct: 187 IEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF 246

Query: 107 ARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQ---PGEHGSTFGGN 163
            R     A D   V PD+  LGK +GGG +P+ A    K++M  +    P     T  GN
Sbjct: 247 -RFMYGGAQDLLGVEPDLTALGKIIGGG-LPIGAYGGRKDIMEQVAPLGPAYQAGTMAGN 304

Query: 164 PLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFK 199
           P + A  IA L+V++ E + E+   LG  L + + +
Sbjct: 305 PASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILE 340

Length = 428

>gnl|CDD|129782 TIGR00699, GABAtrns_euk, 4-aminobutyrate aminotransferase, eukaryotic type

 Score = 90.7 bits (225), Expect = 2e-20
 Identities = 64/276 (23%), Positives = 118/276 (42%), Gaps = 28/276 (10%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFG------PLLP---------GHLKVDFGD--- 46
           I+S  G FHGR   ++S +  ++ I          P  P          H+K +  +   
Sbjct: 178 ILSFKGAFHGRLFGSLSTTR-SKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQR 236

Query: 47  -ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 105
            +  +E + K+    +A  + EPIQ E G       + + +RD+  K+N+  I DE+Q+G
Sbjct: 237 CLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTG 296

Query: 106 LARSGRMLASD-WE-EVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGN 163
           +  +G+  A + W  +  PDMV   K                      +P    +T+ G+
Sbjct: 297 VGATGKFWAHEHWNLDDPPDMVTFSKKFQTA-----GYFFHDPAFRPNKPYRQFNTWMGD 351

Query: 164 PLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223
           P  + +    +  I+ + L E  AH+G+ L   L  +Q+++P +++ +RG+G    + +D
Sbjct: 352 PSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWD 411

Query: 224 KTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPL 259
            T        +  K +  G+         +RL P L
Sbjct: 412 -TPDEAKRDKLLKKARNNGVNIGGCGVKAIRLRPML 446

This enzyme is a class III pyridoxal-phosphate-dependent aminotransferase. This model describes known eukaryotic examples of the enzyme. The degree of sequence difference between this set and known bacterial examples is greater than the distance between either set the most similar enzyme with distinct function, and so separate models are built for prokaryotic and eukaryotic sets. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase [Central intermediary metabolism, Other]. Length = 464

>gnl|CDD|178100 PLN02482, PLN02482, glutamate-1-semialdehyde 2,1-aminomutase

 Score = 87.9 bits (218), Expect = 2e-19
 Identities = 53/178 (29%), Positives = 90/178 (50%), Gaps = 18/178 (10%)

Query: 10  GCFHGRTLAAISMSCDNEAIRGFGPLLPG--------HLKVDFGDITALEKIFKESGDQI 61
           GC+HG   + +  +    A  G  P  PG         L   + D+ A++K+F+ +  +I
Sbjct: 189 GCYHGHADSFLVKAGSGVATLGL-PDSPGVPKAATSATLTAPYNDLEAVKKLFEANKGEI 247

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG--LARSGRMLASDWEE 119
           A  + EP+ G +G I+P   +L+ +R++  +   L++ DE+ +G  +A  G   A ++  
Sbjct: 248 AAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAYGG---AQEYFG 304

Query: 120 VRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG---EHGSTFGGNPLASAVAIASL 174
           + PD+  LGK +GGG +PV A    +E+M  + P        T  GNPLA    I +L
Sbjct: 305 ITPDLTTLGKVIGGG-LPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTL 361

Length = 474

>gnl|CDD|180471 PRK06209, PRK06209, glutamate-1-semialdehyde 2,1-aminomutase; Provisional

 Score = 78.2 bits (193), Expect = 4e-16
 Identities = 53/165 (32%), Positives = 74/165 (44%), Gaps = 26/165 (15%)

Query: 44  FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 103
           + DI +LE +F++   +IA  + EP   +     P DG+L  VR LC +   L I DE+ 
Sbjct: 171 YNDIASLEALFEDHPGRIACVILEPATADE----PQDGFLHEVRRLCHENGALFILDEMI 226

Query: 104 SGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS----- 158
           +G     R  A     + PD+   GKALG G   VSA+   +E M      E G      
Sbjct: 227 TGFRWHMRG-AQKLYGIVPDLSCFGKALGNG-FAVSALAGKREYM------ELGGLEHTD 278

Query: 159 ---------TFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELR 194
                    T G    A A AIA++ + RDE + ER    G +L 
Sbjct: 279 RERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLA 323

Length = 431

>gnl|CDD|235917 PRK07046, PRK07046, aminotransferase; Validated

 Score = 75.8 bits (187), Expect = 2e-15
 Identities = 56/174 (32%), Positives = 81/174 (46%), Gaps = 32/174 (18%)

Query: 42  VDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADE 101
           V+F D+ ALE      GD +A  L EP     G+++P  G+ +A+R+L  +Y  L++ DE
Sbjct: 202 VEFNDLAALEAALA-DGD-VAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDE 259

Query: 102 ---IQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIP-----VSAVLAD--KEVMLCI 151
              I SG     R        + PD +++GK + GGV P      SA LA+  +      
Sbjct: 260 THTISSGPGGYTRAHG-----LEPDFLVVGKPIAGGV-PCAVYGFSAELAERAQAAKASA 313

Query: 152 QPGEH---GSTFGGNPLASAVAIASL-DVIRDE------KLAERSAHLGEELRQ 195
            PG H   G+T   N LA A   A+L +V+ +        LA R   L   LR 
Sbjct: 314 PPG-HSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAAR---LAAGLRA 363

Length = 453

>gnl|CDD|215526 PLN02974, PLN02974, adenosylmethionine-8-amino-7-oxononanoate transaminase

 Score = 59.7 bits (145), Expect = 7e-10
 Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 30/222 (13%)

Query: 61  IAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE 119
           IA  + EP + G  G+++    + +A+  +C    I +I DE+ +GL R G   A +   
Sbjct: 585 IAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLG 644

Query: 120 VRPDMVILGKALGGGVIPVSAVLADKEV------------MLCIQPGEHGSTFGGNPLAS 167
            +PD+    K L GG++P++A LA +EV            +L      HG ++  +P+  
Sbjct: 645 CKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALL------HGHSYTAHPMGC 698

Query: 168 AVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223
           A A  +L   +D      L    + L E   + L +     PN V+ V   G   A+E D
Sbjct: 699 AAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPN-VERVVSLGTVLALELD 757

Query: 224 KTA-----LPVSAYDICLKM-KERGILAKPTHDTIVRLTPPL 259
                     + A  +  ++ +E GI A+P  + +  +  P 
Sbjct: 758 AEGSGSGYSSLYARSVVRRLRREDGIYARPLGNVVYLMCGPT 799

Length = 817

>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

 Score = 48.1 bits (115), Expect = 7e-07
 Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 8/94 (8%)

Query: 45  GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 104
           G +        ++   +A  +  P     GV++P     K +R +  +Y IL++ D   +
Sbjct: 77  GGLDVAILEELKAKPNVALIVITPNTTSGGVLVPL----KEIRKIAKEYGILLLVDAASA 132

Query: 105 GLARSGRMLASDWEEVRPDMVILG--KALGGGVI 136
           G A     +         D+V     K LGG   
Sbjct: 133 GGASPAPGVLIPEG--GADVVTFSLHKNLGGEGG 164

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V). Length = 170

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score = 47.7 bits (114), Expect = 3e-06
 Identities = 35/164 (21%), Positives = 63/164 (38%), Gaps = 11/164 (6%)

Query: 46  DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 105
           D  ALE   KE+ +     L        G +   +  L+ + DL  ++NIL++ DE  +G
Sbjct: 128 DFDALEAALKEATEGNKVVLHTSPHNPTGTVATLEE-LEKLLDLAKEHNILLLVDEAYAG 186

Query: 106 LARSGRMLASDWEEV--RPDMVI---LGKALGGGVIPVSAVLADKEV---MLCIQPGEHG 157
                    +    +   P++++     KA G     V  +L +  V   +  +    + 
Sbjct: 187 FVFGSLDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNAAVISQLRKLARPFYS 246

Query: 158 STFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKI 200
           ST      A+A     L V  + E++ +R     + LR  L   
Sbjct: 247 STHLQ-AAAAAALSDPLLVASELEEMRQRIKERRDYLRDGLEAA 289

Length = 357

>gnl|CDD|223234 COG0156, BioF, 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

 Score = 45.7 bits (109), Expect = 2e-05
 Identities = 48/173 (27%), Positives = 69/173 (39%), Gaps = 31/173 (17%)

Query: 46  DITALEKIFKESGDQIAGFLFEPIQG---EAGVIIPPDGYLKAVRDLCSKYNILMIADEI 102
           D+  LE + +E+ +  A       +G     G I P    L  + +L  KY  L+  DE 
Sbjct: 154 DLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAP----LPELVELAEKYGALLYVDEA 209

Query: 103 QS-G-LARSGRMLA-SDWEEVRPDMVI---LGKALG--GGVIPVSAVLADKEVMLCIQPG 154
            + G L  +GR LA     E     +I   LGKALG  GG I  SA L D          
Sbjct: 210 HAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSGGYIAGSAALIDYLR------- 262

Query: 155 EHGSTF----GGNPLASAVAIASLDVIRD-----EKLAERSAHLGEELRQHLF 198
                F       P  +A A+A+L ++ +     E+L E +A     L+    
Sbjct: 263 NRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKALGL 315

Length = 388

>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family

 Score = 41.6 bits (98), Expect = 3e-04
 Identities = 46/250 (18%), Positives = 87/250 (34%), Gaps = 23/250 (9%)

Query: 39  HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMI 98
            L  + G +  LE +      +             G ++  +  L+ + +L  K+ IL+I
Sbjct: 111 PLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEE-ELEELAELAKKHGILII 169

Query: 99  ADEIQSGLARSGR-MLASDWEEVRPDMVILG---KALGGGVIP---VSAVLADKEVMLCI 151
           +DE  + L   G    A    +    +++L    K  G   +P   +  ++A  E +L  
Sbjct: 170 SDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFG---LPGLRIGYLIAPPEELLER 226

Query: 152 QPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEV 211
                  T  G    S  A A+     +E L E         R  L +  ++    V   
Sbjct: 227 LKKLLPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRR-RDALLEALKELGPLVVVK 285

Query: 212 RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTI------VRLTPPLSISSNE 265
              G F  ++  +         +   + E G++ +P           VRL+   +    E
Sbjct: 286 PSGGFFLWLDLPE---GDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLS--FATPEEE 340

Query: 266 LQEGSKALHD 275
           L+E  + L +
Sbjct: 341 LEEALERLAE 350

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein. Length = 350

>gnl|CDD|235655 PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed

 Score = 41.3 bits (98), Expect = 4e-04
 Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 35/145 (24%)

Query: 80  DG---YLKAVRDLCSKYNILMIADEIQSG--LARSGRMLASDWE-EVRPD---MVILGKA 130
           DG    L  +  L  ++   ++ DE      L   GR LA++      PD   +  LGKA
Sbjct: 181 DGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKA 240

Query: 131 LG--GGVIPVSAVLADKEVMLCIQPGEH----GSTF----GGNPLASAVAIASLDVIRDE 180
           LG  G      AVL  + +       ++       F       P  +A A A+L ++R E
Sbjct: 241 LGSSGA-----AVLGSETL------IDYLINRARPFIFTTALPPAQAAAARAALRILRRE 289

Query: 181 -----KLAERSAHLGEELRQHLFKI 200
                +LA   A L   LR   F++
Sbjct: 290 PERRERLAALIARLRAGLRALGFQL 314

Length = 385

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	306
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	100.0
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	100.0
KOG1402	427	consensus Ornithine aminotransferase [Amino acid t	100.0
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	100.0
PLN02624	474	ornithine-delta-aminotransferase	100.0
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	100.0
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	100.0
PRK07678	451	aminotransferase; Validated	100.0
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	100.0
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK05965	459	hypothetical protein; Provisional	100.0
PRK07482	461	hypothetical protein; Provisional	100.0
PRK04612	408	argD acetylornithine transaminase protein; Provisi	100.0
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PLN00144	382	acetylornithine transaminase	100.0
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	100.0
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	100.0
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	100.0
PRK07483	443	hypothetical protein; Provisional	100.0
PRK07481	449	hypothetical protein; Provisional	100.0
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	100.0
PLN02760	504	4-aminobutyrate:pyruvate transaminase	100.0
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	100.0
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	100.0
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	100.0
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK01278	389	argD acetylornithine transaminase protein; Provisi	100.0
PRK06105	460	aminotransferase; Provisional	100.0
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	100.0
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	100.0
PRK06062	451	hypothetical protein; Provisional	100.0
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	100.0
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	100.0
PRK07036	466	hypothetical protein; Provisional	100.0
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	100.0
PRK06541	460	hypothetical protein; Provisional	100.0
PRK09792	421	4-aminobutyrate transaminase; Provisional	100.0
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	100.0
PRK03715	395	argD acetylornithine transaminase protein; Provisi	100.0
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	100.0
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	100.0
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	100.0
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	100.0
PRK07480	456	putative aminotransferase; Validated	100.0
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	100.0
PRK06917	447	hypothetical protein; Provisional	100.0
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	100.0
KOG1401	433	consensus Acetylornithine aminotransferase [Amino	100.0
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	100.0
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	100.0
PRK03244	398	argD acetylornithine aminotransferase; Provisional	100.0
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	100.0
PRK12403	460	putative aminotransferase; Provisional	100.0
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	100.0
PTZ00125	400	ornithine aminotransferase-like protein; Provision	100.0
PRK02936	377	argD acetylornithine aminotransferase; Provisional	100.0
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	100.0
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	100.0
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	100.0
PRK08297	443	L-lysine aminotransferase; Provisional	100.0
PRK06148	1013	hypothetical protein; Provisional	100.0
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	100.0
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	100.0
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	100.0
PRK02627	396	acetylornithine aminotransferase; Provisional	100.0
KOG1404	442	consensus Alanine-glyoxylate aminotransferase AGT2	100.0
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	100.0
PRK06149	972	hypothetical protein; Provisional	100.0
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	100.0
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	100.0
PRK04260	375	acetylornithine aminotransferase; Provisional	100.0
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	100.0
PRK08088	425	4-aminobutyrate aminotransferase; Validated	100.0
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	100.0
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	100.0
PRK07046	453	aminotransferase; Validated	100.0
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	100.0
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	100.0
KOG1405	484	consensus 4-aminobutyrate aminotransferase [Amino	100.0
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	99.97
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	99.96
KOG1403	452	consensus Predicted alanine-glyoxylate aminotransf	99.96
PLN02822	481	serine palmitoyltransferase	99.95
PRK13393	406	5-aminolevulinate synthase; Provisional	99.93
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	99.93
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	99.93
PRK07324	373	transaminase; Validated	99.93
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	99.92
PRK09064	407	5-aminolevulinate synthase; Validated	99.92
PRK07682	378	hypothetical protein; Validated	99.92
PRK07681	399	aspartate aminotransferase; Provisional	99.92
PRK06207	405	aspartate aminotransferase; Provisional	99.92
PLN00175	413	aminotransferase family protein; Provisional	99.92
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.92
PRK07505	402	hypothetical protein; Provisional	99.91
PRK06348	384	aspartate aminotransferase; Provisional	99.91
PRK06108	382	aspartate aminotransferase; Provisional	99.91
KOG0257	420	consensus Kynurenine aminotransferase, glutamine t	99.91
PLN02955	476	8-amino-7-oxononanoate synthase	99.91
PRK09148	405	aminotransferase; Validated	99.91
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	99.91
PRK08636	403	aspartate aminotransferase; Provisional	99.91
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	99.91
PRK07309	391	aromatic amino acid aminotransferase; Validated	99.9
PRK07366	388	succinyldiaminopimelate transaminase; Validated	99.9
PRK08175	395	aminotransferase; Validated	99.9
PRK05957	389	aspartate aminotransferase; Provisional	99.9
PRK08068	389	transaminase; Reviewed	99.9
PRK05942	394	aspartate aminotransferase; Provisional	99.9
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	99.9
PRK06225	380	aspartate aminotransferase; Provisional	99.9
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	99.9
PRK07179	407	hypothetical protein; Provisional	99.9
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	99.9
PRK13392	410	5-aminolevulinate synthase; Provisional	99.9
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	99.9
PRK08912	387	hypothetical protein; Provisional	99.9
PRK06290	410	aspartate aminotransferase; Provisional	99.9
PRK12414	384	putative aminotransferase; Provisional	99.89
PRK08960	387	hypothetical protein; Provisional	99.89
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	99.89
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	99.89
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	99.89
PRK09082	386	methionine aminotransferase; Validated	99.89
PRK08361	391	aspartate aminotransferase; Provisional	99.89
PLN02483	489	serine palmitoyltransferase	99.89
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	99.89
PRK07683	387	aminotransferase A; Validated	99.89
PRK07777	387	aminotransferase; Validated	99.89
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	99.89
PRK06855	433	aminotransferase; Validated	99.88
PLN02187	462	rooty/superroot1	99.88
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	99.88
PRK05764	393	aspartate aminotransferase; Provisional	99.88
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	99.88
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	99.88
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	99.88
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	99.88
KOG1360	570	consensus 5-aminolevulinate synthase [Coenzyme tra	99.88
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	99.88
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	99.88
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	99.88
PRK06425	332	histidinol-phosphate aminotransferase; Validated	99.88
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	99.87
PTZ00433	412	tyrosine aminotransferase; Provisional	99.87
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.87
PRK01533	366	histidinol-phosphate aminotransferase; Validated	99.87
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	99.87
PRK06107	402	aspartate aminotransferase; Provisional	99.87
PLN02656	409	tyrosine transaminase	99.87
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	99.87
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	99.87
PRK07550	386	hypothetical protein; Provisional	99.87
PRK07568	397	aspartate aminotransferase; Provisional	99.87
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	99.87
PRK07337	388	aminotransferase; Validated	99.87
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	99.87
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	99.87
PTZ00377	481	alanine aminotransferase; Provisional	99.87
PTZ00376	404	aspartate aminotransferase; Provisional	99.87
PRK08363	398	alanine aminotransferase; Validated	99.86
PRK02731	367	histidinol-phosphate aminotransferase; Validated	99.86
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.86
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	99.86
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.86
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	99.86
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	99.86
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.86
PRK05839	374	hypothetical protein; Provisional	99.85
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	99.85
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	99.85
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	99.85
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	99.85
PRK09275	527	aspartate aminotransferase; Provisional	99.85
PRK06836	394	aspartate aminotransferase; Provisional	99.85
PRK09265	404	aminotransferase AlaT; Validated	99.85
PRK10874	401	cysteine sulfinate desulfinase; Provisional	99.85
PRK08637	388	hypothetical protein; Provisional	99.85
cd00609	350	AAT_like Aspartate aminotransferase family. This f	99.85
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	99.85
PRK03321	352	putative aminotransferase; Provisional	99.85
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	99.85
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	99.85
PLN02231	534	alanine transaminase	99.85
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	99.84
PRK06358	354	threonine-phosphate decarboxylase; Provisional	99.84
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	99.84
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	99.84
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	99.84
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.84
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	99.84
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.84
PRK00950	361	histidinol-phosphate aminotransferase; Validated	99.84
PRK09257	396	aromatic amino acid aminotransferase; Provisional	99.84
PLN02397	423	aspartate transaminase	99.83
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	99.83
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	99.83
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	99.83
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	99.83
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	99.83
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	99.83
KOG0256	471	consensus 1-aminocyclopropane-1-carboxylate syntha	99.83
PRK09105	370	putative aminotransferase; Provisional	99.83
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	99.83
PLN02409	401	serine--glyoxylate aminotransaminase	99.83
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.82
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	99.82
PLN02672	1082	methionine S-methyltransferase	99.82
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	99.82
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.82
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	99.82
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	99.82
PRK08056	356	threonine-phosphate decarboxylase; Provisional	99.82
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.82
KOG0634	472	consensus Aromatic amino acid aminotransferase and	99.81
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	99.81
PRK08354	311	putative aminotransferase; Provisional	99.81
KOG1359	417	consensus Glycine C-acetyltransferase/2-amino-3-ke	99.8
PLN02721	353	threonine aldolase	99.8
PRK07392	360	threonine-phosphate decarboxylase; Validated	99.8
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.79
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.79
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	99.79
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	99.79
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.78
KOG0259	447	consensus Tyrosine aminotransferase [Amino acid tr	99.78
PRK02948	381	cysteine desulfurase; Provisional	99.77
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.76
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.76
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.76
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.75
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	99.75
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	99.74
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.73
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.73
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.73
PLN02368	407	alanine transaminase	99.73
KOG1357	519	consensus Serine palmitoyltransferase [Posttransla	99.73
PRK07908	349	hypothetical protein; Provisional	99.72
PRK10534	333	L-threonine aldolase; Provisional	99.72
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.71
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.71
PLN02242	418	methionine gamma-lyase	99.69
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.69
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.69
KOG1368	384	consensus Threonine aldolase [Amino acid transport	99.69
PLN02651	364	cysteine desulfurase	99.68
PRK06460	376	hypothetical protein; Provisional	99.67
PRK06767	386	methionine gamma-lyase; Provisional	99.67
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.67
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	99.67
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.66
PRK07049	427	methionine gamma-lyase; Validated	99.66
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.66
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.64
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.64
PRK06234	400	methionine gamma-lyase; Provisional	99.64
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	99.64
PRK08249	398	cystathionine gamma-synthase; Provisional	99.64
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.64
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.63
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.63
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.63
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.62
COG3844	407	Kynureninase [Amino acid transport and metabolism]	99.62
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.62
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.61
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.61
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	99.61
PRK08045	386	cystathionine gamma-synthase; Provisional	99.6
PRK08776	405	cystathionine gamma-synthase; Provisional	99.58
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.58
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.58
PRK05968	389	hypothetical protein; Provisional	99.58
PRK07811	388	cystathionine gamma-synthase; Provisional	99.57
PRK14012	404	cysteine desulfurase; Provisional	99.57
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	99.57
PRK03080	378	phosphoserine aminotransferase; Provisional	99.57
PRK07503	403	methionine gamma-lyase; Provisional	99.57
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.56
PRK07050	394	cystathionine beta-lyase; Provisional	99.56
PRK09028	394	cystathionine beta-lyase; Provisional	99.56
PRK08861	388	cystathionine gamma-synthase; Provisional	99.55
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.55
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.54
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.54
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.54
PRK08064	390	cystathionine beta-lyase; Provisional	99.54
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.54
PRK07582	366	cystathionine gamma-lyase; Validated	99.53
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.52
PRK08574	385	cystathionine gamma-synthase; Provisional	99.52
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.52
KOG0633	375	consensus Histidinol phosphate aminotransferase [A	99.51
PRK05967	395	cystathionine beta-lyase; Provisional	99.5
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.5
PRK05939	397	hypothetical protein; Provisional	99.5
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.5
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.5
PRK07671	377	cystathionine beta-lyase; Provisional	99.49
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.49
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.48
PLN02509	464	cystathionine beta-lyase	99.48
PRK08114	395	cystathionine beta-lyase; Provisional	99.48
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.46
PRK02769	380	histidine decarboxylase; Provisional	99.46
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.46
PRK05367	954	glycine dehydrogenase; Provisional	99.46
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.45
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.45
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.44
PLN02724	805	Molybdenum cofactor sulfurase	99.42
PRK12566	954	glycine dehydrogenase; Provisional	99.42
KOG1358	467	consensus Serine palmitoyltransferase [Posttransla	99.42
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	99.4
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.4
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.39
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.39
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.38
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.38
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	99.37
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.36
KOG0053	409	consensus Cystathionine beta-lyases/cystathionine	99.34
KOG1549	428	consensus Cysteine desulfurase NFS1 [Amino acid tr	99.33
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.32
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.32
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	99.3
PLN02880	490	tyrosine decarboxylase	99.28
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.27
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.25
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.25
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.24
PLN03032	374	serine decarboxylase; Provisional	99.21
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.2
PLN02590	539	probable tyrosine decarboxylase	99.2
PRK04311	464	selenocysteine synthase; Provisional	99.2
KOG3846	465	consensus L-kynurenine hydrolase [Amino acid trans	99.19
PLN02271	586	serine hydroxymethyltransferase	99.18
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.14
PRK13237	460	tyrosine phenol-lyase; Provisional	99.13
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.12
PRK06434	384	cystathionine gamma-lyase; Validated	99.1
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	99.09
PRK15029	755	arginine decarboxylase; Provisional	99.07
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.06
PLN02452	365	phosphoserine transaminase	99.05
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	99.04
PLN02263	470	serine decarboxylase	99.04
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.02
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	98.99
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	98.95
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	98.95
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	98.92
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	98.92
PLN02414	993	glycine dehydrogenase (decarboxylating)	98.9
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	98.88
PRK05367	954	glycine dehydrogenase; Provisional	98.86
PRK15399	713	lysine decarboxylase LdcC; Provisional	98.81
PRK15400	714	lysine decarboxylase CadA; Provisional	98.79
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	98.77
PRK12462	364	phosphoserine aminotransferase; Provisional	98.73
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	98.71
PRK13578	720	ornithine decarboxylase; Provisional	98.69
KOG0258	475	consensus Alanine aminotransferase [Amino acid tra	98.58
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	98.57
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	98.48
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	98.39
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	98.36
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	98.29
KOG1412	410	consensus Aspartate aminotransferase/Glutamic oxal	98.26
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	98.25
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	98.22
KOG0629	510	consensus Glutamate decarboxylase and related prot	98.19
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	98.16
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	98.1
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	98.09
KOG1383	491	consensus Glutamate decarboxylase/sphingosine phos	98.03
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	97.87
KOG0628	511	consensus Aromatic-L-amino-acid/L-histidine decarb	97.84
KOG2467	477	consensus Glycine/serine hydroxymethyltransferase	97.65
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	97.62
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	97.6
KOG3843	432	consensus Predicted serine hydroxymethyltransferas	97.52
PRK12566	954	glycine dehydrogenase; Provisional	97.43
COG4100	416	Cystathionine beta-lyase family protein involved i	97.07
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	96.99
KOG1411	427	consensus Aspartate aminotransferase/Glutamic oxal	96.52
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	90.08

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=5.2e-54  Score=373.16  Aligned_cols=272  Identities=45%  Similarity=0.779  Sum_probs=261.0

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+||.|.+||||+|++++++++++.+++.|.|.++++.++||||+++++++|+   ++|++|++||++..+|.++++++
T Consensus       129 k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~---~~taAvivEPIQGEgGV~~~~~~  205 (404)
T COG4992         129 KSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAID---EDTAAVIVEPIQGEGGVIPAPPE  205 (404)
T ss_pred             CcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhc---cCeEEEEEecccCCCCCCCCCHH
Confidence            579999999999999999999999999999999999999999999999999999   48999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      ||++++++|++||++||.||+|+|+||+|+.|+++++++.||+++++|++|||+ |+|.+++++.+.+.+.+..|++||.
T Consensus       206 fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tlaK~LgGG~-PigA~la~~~~~~~~~~G~HgSTfG  284 (404)
T COG4992         206 FLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLAKALGGGF-PIGAMLATEEIASAFTPGDHGSTFG  284 (404)
T ss_pred             HHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEEeeccccCCc-cceeeEEchhhhhcCCCCcccCCCC
Confidence            999999999999999999999999999999999999999999999999999998 9999999988888899999999999


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      +|+++++++.++++.+.++++.++.++.+++++++|+++...++ .+..+++.|+++.+.+..   ...+.++++.|+++
T Consensus       285 GNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~-~v~~vRG~GLmiGiel~~---~~~a~~~~~~~~~~  360 (404)
T COG4992         285 GNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYP-LVKEVRGRGLMIGIELKE---PYRARDIVRALREE  360 (404)
T ss_pred             cCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCC-ceeeeecceeEEEEEecC---cccHHHHHHHHHHC
Confidence            99999999999999999999999999999999999999999986 899999999999999985   22578999999999


Q ss_pred             CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      |+++-+.+++.+|+.|++..+++++++++++|++++. ...
T Consensus       361 gvL~~~a~~~ViR~~PpL~i~~eei~~~~~~l~~~l~-~~~  400 (404)
T COG4992         361 GVLVLPAGPNVIRFLPPLVITEEEIDEALDALERALA-AAS  400 (404)
T ss_pred             CeEEecCCCCeEEecCCccCCHHHHHHHHHHHHHHHH-Hhh
Confidence            9999999999999999999999999999999999998 554

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=100.00  E-value=1.7e-46  Score=335.44  Aligned_cols=276  Identities=44%  Similarity=0.767  Sum_probs=249.8

Q ss_pred             cceEEEEecCCCCcccchhcccCCccc-cccCCCCCCCcccccCCC-----------------HHHHHHHHHh---cCCc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEA-IRGFGPLLPGHLKVDFGD-----------------ITALEKIFKE---SGDQ   60 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~---~~~~   60 (306)
                      +..||+|.++|||.|.+++++++.... +..+.|..+++.++||++                 .+.+|..+.+   .+.+
T Consensus       143 r~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~  222 (447)
T COG0160         143 RPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEE  222 (447)
T ss_pred             CCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCc
Confidence            578999999999999999999996444 467778888888888863                 2335554443   3467


Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCccccee
Q 021893           61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSA  140 (306)
Q Consensus        61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~  140 (306)
                      ++++++||+++.+|.++++++||++++++|++||+++|+||+|+||||+|+.|+++++++.||++|+||++++|+ |+|.
T Consensus       223 vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~aK~ig~G~-Pl~a  301 (447)
T COG0160         223 VAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLAKSLGGGL-PLSA  301 (447)
T ss_pred             eeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEecccccCCC-ceeE
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999 9999


Q ss_pred             eEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEE
Q 021893          141 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV  220 (306)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i  220 (306)
                      +++++++++ ..+..+.++|.+|+++++++.++++.+.++++.++.++++++++++|.++..++| .+.++++.|+|+.+
T Consensus       302 vv~r~ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~-~IgdVRG~Glm~gi  379 (447)
T COG0160         302 VVGRAEIMD-WPPGGHGGTFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHP-LIGDVRGLGLMIGV  379 (447)
T ss_pred             EeccHHhcc-cCCcccCCCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcC-ceecccccceEEEE
Confidence            999999998 7788899999999999999999999999999999999999999999999999996 99999999999999


Q ss_pred             EEecCC-----ChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          221 EFDKTA-----LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       221 ~~~~~~-----~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ++..+.     .......+++.|+++|+++..++  .+.|||.||+..++++++.+++.|++++. +.
T Consensus       380 E~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~~~nviRi~PPL~is~e~~d~~l~il~~al~-~~  446 (447)
T COG0160         380 ELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGPHGNVLRILPPLTISDEELDEGLDILEEALK-EA  446 (447)
T ss_pred             EEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccCCCCcEEEEeCCcccCHHHHHHHHHHHHHHHH-hh
Confidence            998642     23456789999999999999887  89999999999999999999999999998 53

>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=6e-47  Score=315.75  Aligned_cols=275  Identities=60%  Similarity=1.010  Sum_probs=261.8

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCC-cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCCh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPD   80 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~   80 (306)
                      +.+|++..++|||.|+++.+++.+++.+..|.|..|+ +..+||+|.++||.++++  ++++++++||++...|.++|++
T Consensus       150 ka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~~--~~vaaFivEPIQGEaGVvvP~~  227 (427)
T KOG1402|consen  150 KAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYGDAEALEVALKS--PNVAAFIVEPIQGEAGVVVPPP  227 (427)
T ss_pred             ceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccCCHHHHHHHhcC--CCeeEEEeeccccccceEeCCc
Confidence            4689999999999999999999999899999999999 799999999999999997  7899999999999999999999


Q ss_pred             hHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCC
Q 021893           81 GYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTF  160 (306)
Q Consensus        81 ~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~  160 (306)
                      .+|++.++||.+|++++|.||+|+|++|+|+.+.+++..+.||++.++|+++||+.|++.+++++++|-.+++..|+.||
T Consensus       228 GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivilgKalSGG~~Pvsavl~~~~im~~~~pgeHgsTy  307 (427)
T KOG1402|consen  228 GYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVILGKALSGGVYPVSAVLADDDIMLNIKPGEHGSTY  307 (427)
T ss_pred             hhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEEEeccccCCeeeeEEEEecHHHHhccCCCcccccc
Confidence            99999999999999999999999999999999999999999999999999999988999999999999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-ChhhHHHHHHHHH
Q 021893          161 GGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-LPVSAYDICLKMK  239 (306)
Q Consensus       161 ~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-~~~~~~~~~~~l~  239 (306)
                      .+|+++++++.++++.+.++++.++...++..++.+|+++...+|+.+..+++.|++..+.+.+.+ .+.++.++|-.+.
T Consensus       308 ggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk  387 (427)
T KOG1402|consen  308 GGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTSGQDAWDVCLALK  387 (427)
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccccchhHHHHHHccc
Confidence            999999999999999999999999999999999999999998888889999999999999988644 3467778899999


Q ss_pred             HCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          240 ERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       240 ~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ++|++..|.+++.|||.|++.++++|+++.++.|.+.+.
T Consensus       388 ~~g~LAkptH~~IiRfaPPL~I~e~dl~eg~e~i~k~i~  426 (427)
T KOG1402|consen  388 ENGLLAKPTHGNIIRFAPPLVISEEDLREGIEAIEKTIA  426 (427)
T ss_pred             ccccccCCCCCCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999988764

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=100.00  E-value=1.5e-44  Score=331.83  Aligned_cols=278  Identities=38%  Similarity=0.735  Sum_probs=251.6

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHh---cCCcEEEEEEccccCCCCcccC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIP   78 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~---~~~~~~~v~v~~~~~~~G~~~~   78 (306)
                      |++||.|+++|||++.+++++++...++.++.|..+++..+|++|.+++++.+++   +++++++|++||+++++|.+.+
T Consensus       170 r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~p  249 (459)
T PRK11522        170 KFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILP  249 (459)
T ss_pred             CcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccC
Confidence            4689999999999999999999987778888899899999999999999999974   3467999999999999999999


Q ss_pred             ChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcC--CCCc
Q 021893           79 PDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQ--PGEH  156 (306)
Q Consensus        79 ~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~--~~~~  156 (306)
                      +++||++++++|++||+++|+||+|+|||+.|..|.++++++.||+++++|++++|+.|+|.+++++++++.+.  +..+
T Consensus       250 p~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~  329 (459)
T PRK11522        250 PEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLH  329 (459)
T ss_pred             CHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEEEechhhhCCCccceeEEEcHHHHHHhccCCccc
Confidence            99999999999999999999999999999999998899999999999999999999449999999999998774  3467


Q ss_pred             cCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHH
Q 021893          157 GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICL  236 (306)
Q Consensus       157 ~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~  236 (306)
                      ++||.+|+++++++.++++.+.++++.+++++++++++++|+++...+|..+..+++.|+++.+++.+   ......+.+
T Consensus       330 ~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~---~~~~~~i~~  406 (459)
T PRK11522        330 TTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVD---NEIGYNFAS  406 (459)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecC---chHHHHHHH
Confidence            88999999999999999999998889999999999999999999877754678999999999999975   234567899


Q ss_pred             HHHHCCceeccC--CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          237 KMKERGILAKPT--HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       237 ~l~~~Gi~~~~~--~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      .|+++||++.+.  +.+.+|+.|++.++++|+++++++|+++++ ++.+
T Consensus       407 ~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~-~~~~  454 (459)
T PRK11522        407 EMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKALA-AMRV  454 (459)
T ss_pred             HHHHCCeEEEecCCCCCEEEEECCccCCHHHHHHHHHHHHHHHH-HHHH
Confidence            999999999865  457999999999999999999999999998 6654

>PLN02624 ornithine-delta-aminotransferase

Probab=100.00  E-value=2.1e-44  Score=333.29  Aligned_cols=303  Identities=80%  Similarity=1.303  Sum_probs=266.8

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+||.|.|+|||.+.+++++++++.....|.|..+++..+||+|++.+++.++.+++++++|++||+++++|.+.+++++
T Consensus       167 ~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~  246 (474)
T PLN02624        167 AIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGY  246 (474)
T ss_pred             cEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHH
Confidence            47999999999999999999998777778888989999999999999999998766789999999999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCC
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGG  162 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~  162 (306)
                      |++|.++|++||+++|+||+|+|+|+.|..+..+++++.||++++||++++|+.++|+++.++++++.+.+..+..++++
T Consensus       247 L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~~~~~~~T~~g  326 (474)
T PLN02624        247 LKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIKPGEHGSTFGG  326 (474)
T ss_pred             HHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEEEecccccCCCCcceeeeecHHHHhHhccCCcCCCCCC
Confidence            99999999999999999999999999998887777889999999999999763399999999999988877778888899


Q ss_pred             CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC-hhhHHHHHHHHHHC
Q 021893          163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-PVSAYDICLKMKER  241 (306)
Q Consensus       163 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~-~~~~~~~~~~l~~~  241 (306)
                      ++++++++.++++.+.++++.++..++.+.+++.|+++...++..+..+++.|.++.+.+..... .....++++.|+++
T Consensus       327 ~pl~~aaa~aaLe~l~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~  406 (474)
T PLN02624        327 NPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKER  406 (474)
T ss_pred             CHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCCcChHHHHHHHHHHHhC
Confidence            99999999999999988788899999999999999998777654466688999999988764210 23456899999999


Q ss_pred             CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc---CCCCCCCCCCCCCCCCccccccCC
Q 021893          242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL---PKMRKPKPADAPATPCHRCGRNLY  305 (306)
Q Consensus       242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  305 (306)
                      ||++.|.+.+++||+|++.+++++|++++++|++++.+..   .+...+.++..++++|++|+++.|
T Consensus       407 GV~v~p~~~~~lR~~p~l~~t~e~id~~l~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  473 (474)
T PLN02624        407 GLLAKPTHDTIIRLAPPLSISEDELQECSKALSDVLEHDLPKLQSAKKEKTPKAAPTPCDRCGRNLY  473 (474)
T ss_pred             CeEEecCCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHHHHhHHhhhhhcCCCCCChhhhhhhhcc
Confidence            9999998889999999999999999999999998887333   344666777777899999999988

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=100.00  E-value=2.4e-44  Score=328.43  Aligned_cols=273  Identities=40%  Similarity=0.732  Sum_probs=247.2

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHh---cCCcEEEEEEccccCCCCcccC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIP   78 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~---~~~~~~~v~v~~~~~~~G~~~~   78 (306)
                      +++||+|+++|||.+.++++++++..++..+.|..+++..+|++|.+.+++.+++   +++++++|++||+++++|.+.+
T Consensus       163 r~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p  242 (442)
T TIGR03372       163 KFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILP  242 (442)
T ss_pred             CcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccC
Confidence            4689999999999999999999977777788888889999999999999988864   4567999999999999999999


Q ss_pred             ChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcC--CCCc
Q 021893           79 PDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQ--PGEH  156 (306)
Q Consensus        79 ~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~--~~~~  156 (306)
                      +++||++++++|++||+++|+||+|+|||+.|..|.++++++.||+++++|++++|+.|+|.+++++++++.+.  +..+
T Consensus       243 ~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lg~G~~Pigavv~~~~i~~~~~~~~~~~  322 (442)
T TIGR03372       243 PEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLAKALGGGVMPIGATIATEAVFSVLFDNPFLH  322 (442)
T ss_pred             CHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeeeehhhhcCCcccceEEEecHHHHHhhhccCccc
Confidence            99999999999999999999999999999999998899999999999999999999449999999999998873  3467


Q ss_pred             cCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHH
Q 021893          157 GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICL  236 (306)
Q Consensus       157 ~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~  236 (306)
                      ++||.+|+++++++.++++.+.++++.++.++.++++++.|+++...+|..+..+++.|+++.+++.+   ......+++
T Consensus       323 ~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~---~~~~~~i~~  399 (442)
T TIGR03372       323 TTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRD---NEIGYAFAK  399 (442)
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCC---hHHHHHHHH
Confidence            88999999999999999999998889999999999999999999887755678999999999999975   234568999


Q ss_pred             HHHHCCceeccC--CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          237 KMKERGILAKPT--HDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       237 ~l~~~Gi~~~~~--~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      .|+++||++.+.  +.+.+|+.|++.+|++|+++++++|++++
T Consensus       400 ~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~~~~l~~~~  442 (442)
T TIGR03372       400 ELFQQNILVAGTLNNAKSIRIEPPLTITIEQCALVIKAAKDAL  442 (442)
T ss_pred             HHHHCCcEEeecCCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence            999999999764  35799999999999999999999998764

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=100.00  E-value=2.8e-44  Score=319.22  Aligned_cols=278  Identities=37%  Similarity=0.639  Sum_probs=248.0

Q ss_pred             cceEEEEecCCCCcccchhcccCCcccc-ccCCCCCCCcccccCCC-----------------HHHHHHHHHhcC-CcEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAI-RGFGPLLPGHLKVDFGD-----------------ITALEKIFKESG-DQIA   62 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~~~-~~~~   62 (306)
                      |+|+|+..+||||.|++++++++..... ..+.+..+++.++|.+.                 +++||++|.+++ ++++
T Consensus       137 r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IA  216 (449)
T COG0161         137 RKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIA  216 (449)
T ss_pred             ceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEE
Confidence            5789999999999999999999955554 66666777765555442                 678899999887 8899


Q ss_pred             EEEEccccCC-CCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceee
Q 021893           63 GFLFEPIQGE-AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAV  141 (306)
Q Consensus        63 ~v~v~~~~~~-~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~  141 (306)
                      ++++||+... +|++++++.||++++++|++|||+||+||+.+||||+|+.|+++++++.||++|++|++++||.|+|.+
T Consensus       217 AfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~  296 (449)
T COG0161         217 AFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAV  296 (449)
T ss_pred             EEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeeeecccccccchhhHhH
Confidence            9999998887 999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeCHHHHhhcCCC-----CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893          142 LADKEVMLCIQPG-----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL  216 (306)
Q Consensus       142 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~  216 (306)
                      ++++++.+.+...     .|+.||++|++++++|++.++.++++++.++.++...++.++|++..... +.+.++++.|+
T Consensus       297 l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~-p~VgdVR~~Gl  375 (449)
T COG0161         297 LTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADH-PLVGDVRGLGL  375 (449)
T ss_pred             hhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccC-CcEEEeeccce
Confidence            9999999887653     68899999999999999999999999999999999999999999964444 48899999999


Q ss_pred             EEEEEEecCCChh------hHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          217 FNAVEFDKTALPV------SAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       217 ~~~i~~~~~~~~~------~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +..+++..+....      ....+.+.++++|++++|. .+.+-++|++..|+++|++++++++++++ +..
T Consensus       376 i~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~-g~~i~~~PPliit~~eid~l~~~l~~al~-~~~  445 (449)
T COG0161         376 IGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL-GDVIYLMPPLIITREEIDELVDALREALD-ETL  445 (449)
T ss_pred             EEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec-CCEEEEcCCccCCHHHHHHHHHHHHHHHH-HHH
Confidence            9999998765322      2667889999999999998 55999999999999999999999999998 654

>PRK07678 aminotransferase; Validated

Probab=100.00  E-value=8.9e-43  Score=320.55  Aligned_cols=278  Identities=31%  Similarity=0.565  Sum_probs=240.4

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-----------------HHHHHHHHH-hcCCcEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFK-ESGDQIAG   63 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~-~~~~~~~~   63 (306)
                      |++||.|.|+|||++.+++++++.......+.|..+++..+|+++                 ++.+|+.++ .+++++++
T Consensus       137 r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAA  216 (451)
T PRK07678        137 RYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAA  216 (451)
T ss_pred             CcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEE
Confidence            578999999999999999999997766677777777776555442                 233677776 34578999


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA  143 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~  143 (306)
                      ||+||+++.+|.++++++||++++++|++||++||+||+++||||.|..|.++++++.||+++++|+++||+.|+|.+++
T Consensus       217 vi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt~gK~lggG~~Pi~av~~  296 (451)
T PRK07678        217 VIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAV  296 (451)
T ss_pred             EEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEEeecccccCCcceeEEEE
Confidence            99999999999999999999999999999999999999999999999988888899999999999999988449999999


Q ss_pred             CHHHHhhcCC------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893          144 DKEVMLCIQP------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF  217 (306)
Q Consensus       144 ~~~~~~~~~~------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~  217 (306)
                      ++++++.+.+      ..+++||.+|+++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+++.|++
T Consensus       297 ~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~-~v~~vrg~Gl~  375 (451)
T PRK07678        297 KKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHP-LVGDIRGKGLL  375 (451)
T ss_pred             cHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCC-CEEEEEeeceE
Confidence            9999988764      2478899999999999999999999889999999999999999988776664 78899999999


Q ss_pred             EEEEEecCC------ChhhHHHHHHHHHHCCceeccCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          218 NAVEFDKTA------LPVSAYDICLKMKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       218 ~~i~~~~~~------~~~~~~~~~~~l~~~Gi~~~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +.+++..+.      .......+...|+++|+++.+.+      .+.+|++|++.+|++||+++++++++++. ++
T Consensus       376 ~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~-~~  450 (451)
T PRK07678        376 VGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALE-RI  450 (451)
T ss_pred             EEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHH-hc
Confidence            999985321      11235678899999999987642      37899999999999999999999999998 65

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=100.00  E-value=8.5e-43  Score=317.31  Aligned_cols=271  Identities=33%  Similarity=0.575  Sum_probs=245.0

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +++||+++++|||.+.+++++++.+.+...+.|..+++..+||||++.+++.++   +++++|++||+++++|.++++++
T Consensus       124 r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~aavi~Epi~~~~G~~~~~~~  200 (397)
T TIGR03246       124 KSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALIS---DKTCAVIVEPIQGEGGVVPADPA  200 (397)
T ss_pred             CCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhc---cCeEEEEEecccCCCCCcCCCHH
Confidence            568999999999999999999887667777888888889999999999999997   57999999999999999888999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      +|++|+++|++||+++|+||+|+|+|+.|..++.+.+++.||++++||+++||+ |+|++++++++++.+....+..+|+
T Consensus       201 ~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t~~K~lggG~-pigav~~~~~i~~~~~~~~~~~t~~  279 (397)
T TIGR03246       201 FLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTSAKALGGGF-PIGAMLTTTEIAAHLKVGTHGTTYG  279 (397)
T ss_pred             HHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEEEeehhhhCCc-ceeEEEEcHHHHHhccCCCcCCCCC
Confidence            999999999999999999999999999999887788899999999999999998 9999999999999988767788899


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      +++++++++.++++.+.++++.+++++++++++++|+++...++ .+..+++.|.++.+.+.+.. ......+++.|+++
T Consensus       280 ~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~~-~~~~vrg~G~~~~i~~~~~~-~~~~~~~~~~l~~~  357 (397)
T TIGR03246       280 GNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINARYN-VFSEIRGKGLLIGAVLTEAY-QGKAKQFVNAAAEE  357 (397)
T ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhcCC-CeEeeecCceEEEEEEcCch-hhHHHHHHHHHHHC
Confidence            99999999999999988888999999999999999999876653 66788899999998876421 13467899999999


Q ss_pred             CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      |+++.+.+.+++|++|++.+++++|++++++|++++.
T Consensus       358 Gv~~~~~g~~~lR~~p~~~~t~~~i~~~~~~l~~~l~  394 (397)
T TIGR03246       358 GVIALIAGPNVVRFAPSLVISDDDIDEGLARFERAIE  394 (397)
T ss_pred             CeEEeecCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence            9999887778999999999999999999999999987

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=8.2e-43  Score=320.43  Aligned_cols=276  Identities=28%  Similarity=0.478  Sum_probs=243.2

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-----------------HHHHHHHHHhcCCcEEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKESGDQIAGF   64 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~~~~~~~~v   64 (306)
                      |+|||+|+++|||.+.+++++++...++..|.|..+++..+|+++                 ++.+++.++++++++++|
T Consensus       146 r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAv  225 (453)
T PRK06943        146 KREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAAL  225 (453)
T ss_pred             CCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence            578999999999999999999998777777777777665555443                 578888898777889999


Q ss_pred             EEcc-ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893           65 LFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA  143 (306)
Q Consensus        65 ~v~~-~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~  143 (306)
                      ++|| +++.+|.++++++||++++++|++||++||+||+++||||+|..|+++++++.||+++++|+++||+.|+|.+++
T Consensus       226 iiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt~gKgl~gG~~Pi~av~~  305 (453)
T PRK06943        226 IVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLS  305 (453)
T ss_pred             EEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCeEeeehhhccCcccceEEEE
Confidence            9999 599999999999999999999999999999999999999999999999999999999999999999559999999


Q ss_pred             CHHHHhhcCC------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893          144 DKEVMLCIQP------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF  217 (306)
Q Consensus       144 ~~~~~~~~~~------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~  217 (306)
                      ++++++.+..      ..+.+||.+|+++++++.++++.+.++++.+++++.+++++++|+++. .++ .+..+++.|++
T Consensus       306 ~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~-~~~-~v~~vrG~Gl~  383 (453)
T PRK06943        306 RDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLA-AHP-QVRHLRQRGTI  383 (453)
T ss_pred             cHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-cCC-CEEeEeccccE
Confidence            9999988753      247789999999999999999999999999999999999999999985 454 67799999999


Q ss_pred             EEEEEecCC--ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          218 NAVEFDKTA--LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       218 ~~i~~~~~~--~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +.+++..+.  .......+.+.++++|+++.+.+ +.+|++|++.+|++||++++++|+++++ ++
T Consensus       384 ~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~g-~~l~~~Ppl~it~~eid~~~~~l~~al~-~~  447 (453)
T PRK06943        384 FAFDVALDGDAARTFSRRFFEAALERELLLRPIG-TTVYLMPPYVLDDDEIAWLAERTRATLD-AT  447 (453)
T ss_pred             EEEEEccCCCcchHHHHHHHHHHHHCCcEEEecC-CEEEEeCCCcCCHHHHHHHHHHHHHHHH-HH
Confidence            999996321  11225578899999999998864 5799999999999999999999999998 65

>PRK05965 hypothetical protein; Provisional

Probab=100.00  E-value=9.7e-43  Score=320.73  Aligned_cols=277  Identities=31%  Similarity=0.527  Sum_probs=241.1

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC---------CC--------HHHHHHHHHhcC-CcEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF---------GD--------ITALEKIFKESG-DQIAG   63 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~d--------~~~le~~i~~~~-~~~~~   63 (306)
                      |+|||+|+++|||.+.+++++++.+.+...+.|..+.+..+++         +|        ++.+++.+++++ +++++
T Consensus       139 r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAA  218 (459)
T PRK05965        139 KKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAA  218 (459)
T ss_pred             ccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEE
Confidence            5789999999999999999998876666666665555443332         23        267888887654 68999


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA  143 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~  143 (306)
                      |++||+++.+|.++++++||++|+++|++||++||+||+++||||.|..|+++++++.||+++++|+++||++|+|.+++
T Consensus       219 vIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~  298 (459)
T PRK05965        219 FFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLM  298 (459)
T ss_pred             EEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEEechhhccCCcceeEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999659999999


Q ss_pred             CHHHHhhcCC-------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893          144 DKEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL  216 (306)
Q Consensus       144 ~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~  216 (306)
                      ++++++.+..       ..+++||.+|+++++++.++++.+.++++.++.++.+++++++|+++. .++ .+..+++.|+
T Consensus       299 ~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~-~~~-~v~~vrG~Gl  376 (459)
T PRK05965        299 SDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALR-AHP-LVGDVRGRGL  376 (459)
T ss_pred             cHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc-cCC-CEEEEeecce
Confidence            9999987753       257889999999999999999999999999999999999999999985 454 7889999999


Q ss_pred             EEEEEEecCCC---h-----hhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          217 FNAVEFDKTAL---P-----VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       217 ~~~i~~~~~~~---~-----~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ++.+++..+..   .     .....+.+.++++|+++.+.+.+.+|++|++.++++||++++++|.++++ ++
T Consensus       377 ~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g~~~i~~~PpL~it~~ei~~~~~~l~~~l~-~~  448 (459)
T PRK05965        377 LGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAFGDGVLGFAPALCCTEGEFDLIFERTRKTLD-DV  448 (459)
T ss_pred             EEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEecCCcEEEEECCCcCCHHHHHHHHHHHHHHHH-HH
Confidence            99999864210   0     12456888999999999987778899999999999999999999999999 76

>PRK07482 hypothetical protein; Provisional

Probab=100.00  E-value=1.6e-42  Score=319.47  Aligned_cols=278  Identities=30%  Similarity=0.509  Sum_probs=242.5

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCC------------------CHHHHHHHHHh-cCCcEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG------------------DITALEKIFKE-SGDQIA   62 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------d~~~le~~i~~-~~~~~~   62 (306)
                      |+|||.|.++|||.+.+++++++.+.+...+.|..+++..++++                  +++.+|+.+.+ .+++++
T Consensus       143 r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iA  222 (461)
T PRK07482        143 KKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIA  222 (461)
T ss_pred             CceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence            67899999999999999999999777777777777766544432                  35788888864 346799


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893           63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL  142 (306)
Q Consensus        63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~  142 (306)
                      +|++||+++.+|.++++++|+++|+++|++||++||+||+++||||.|..|.++++++.||+++++|+++||+.|+|.++
T Consensus       223 Avi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~  302 (461)
T PRK07482        223 AFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSI  302 (461)
T ss_pred             EEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEEEccccccCccccceee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999966999999


Q ss_pred             eCHHHHhhcCC-------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893          143 ADKEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG  215 (306)
Q Consensus       143 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g  215 (306)
                      +++++++.+..       ..+.+||.+|+++++++.++++.+.++++.++.+++++++++.|+++...++ .+..+++.|
T Consensus       303 ~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~v~~vrG~G  381 (461)
T PRK07482        303 VGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHP-LVGEVRGVG  381 (461)
T ss_pred             ecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCC-CEEEEeece
Confidence            99999887652       2477899999999999999999999999999999999999999999887774 788999999


Q ss_pred             eEEEEEEecCCC---h-----hhHHHHHHHHHHCCceeccC-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          216 LFNAVEFDKTAL---P-----VSAYDICLKMKERGILAKPT-HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       216 ~~~~i~~~~~~~---~-----~~~~~~~~~l~~~Gi~~~~~-~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +++.+++..+..   .     .....++..|+++|+++.+. ..+.+|+.|++.+|++||++++++|+++++ ++
T Consensus       382 lm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~-~~  455 (461)
T PRK07482        382 MLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVD-EV  455 (461)
T ss_pred             eEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH-HH
Confidence            999999964221   0     12457889999999998653 357899999999999999999999999998 65

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=100.00  E-value=2.1e-42  Score=314.24  Aligned_cols=276  Identities=38%  Similarity=0.615  Sum_probs=249.0

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +++||.|+++|||.+.+++++++.+.+...+.|..+++..+|++|++.+++.++.  +++++|++||+++.+|.+.++++
T Consensus       131 r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~aavi~eP~~~~gg~~~~~~~  208 (408)
T PRK04612        131 KRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAG--GDVAAVMLEPIQGEGGVMPAAPG  208 (408)
T ss_pred             CcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCC--CCEEEEEECCccCCCCCcCCCHH
Confidence            4589999999999999999999987777788888788888999999999999963  57999999999999998888899


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      ++++|+++|++||+++|+||+|+|+++.|..+....+++.||+.++||++++|+ |+|++++++++++.+....+..+|+
T Consensus       209 ~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~l~~G~-piga~~~~~~~~~~~~~~~~~~t~~  287 (408)
T PRK04612        209 FLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKALGGGF-PIGAMLAGPKVAETMQFGAHGTTFG  287 (408)
T ss_pred             HHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcchhcCCC-ceEEEEECHHHHhhhcCCCcCCCCC
Confidence            999999999999999999999999999998776666788999999999999998 9999999999988887777888999


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      +++++++++.++++.+.++++.++++++.++++++|+++...+ +.+..+++.|+++.+++.... ......+++.|+++
T Consensus       288 ~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~-~~i~~vrg~Gl~~~i~~~~~~-~~~a~~i~~~l~~~  365 (408)
T PRK04612        288 GNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEF-GVFAQVRGRGLMLGAVLAPAH-AGQAGAILDLAAEH  365 (408)
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhC-CCeeeeeccceEEEEEecCch-hhHHHHHHHHHHHC
Confidence            9999999999999999988899999999999999999998877 478899999999999986311 23466789999999


Q ss_pred             CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      |+++.+.+.+.+|+.|++..+++||++++++|++++. ++.+
T Consensus       366 Gvlv~~~g~~~lRl~Ppl~it~eeid~~l~~l~~~l~-~~~~  406 (408)
T PRK04612        366 GLLLLQAGPDVLRFVPALNLTDAELADGLARLRLALA-DYVA  406 (408)
T ss_pred             CeEEeeCCCCEEEEcCCccCCHHHHHHHHHHHHHHHH-HHhh
Confidence            9999988778999999999999999999999999998 7654

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=1.4e-42  Score=319.59  Aligned_cols=276  Identities=27%  Similarity=0.472  Sum_probs=242.2

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-----------------HHHHHHHHHhcCCcEEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKESGDQIAGF   64 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~~~~~~~~v   64 (306)
                      |.|||+|+++|||.+.+++++++...+...|.|..+++.++|+++                 ++.+++.++++++++++|
T Consensus       161 r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAv  240 (472)
T PRK08742        161 RTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICAL  240 (472)
T ss_pred             CcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence            579999999999999999999987777778888887777777653                 567788887666789999


Q ss_pred             EEcc-ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893           65 LFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA  143 (306)
Q Consensus        65 ~v~~-~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~  143 (306)
                      ++|| +++.+|.++++++|+++++++|++||++||+||+++||||+|..|.++++++.||+++++|+++||+.|+|.+++
T Consensus       241 I~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~  320 (472)
T PRK08742        241 ILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLA  320 (472)
T ss_pred             EEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEEEcccccCCCCCcceeec
Confidence            9999 699999999999999999999999999999999999999999999999999999999999999999659999999


Q ss_pred             CHHHHhhcCC------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893          144 DKEVMLCIQP------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF  217 (306)
Q Consensus       144 ~~~~~~~~~~------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~  217 (306)
                      ++++++.+..      ..+.+||.+|+++++++.++++.+.++++.++.++.++++++.++.+ ..++ .+.++++.|++
T Consensus       321 ~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~~~~~~~-~~~~-~i~dvRG~Gl~  398 (472)
T PRK08742        321 TQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDVIARNQPTAARMTQLAAQI-GEHP-HVADVRQAGMV  398 (472)
T ss_pred             cHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH-hcCC-CeeeEeccceE
Confidence            9999987642      24778999999999999999999999999999999999999877775 4453 78899999999


Q ss_pred             EEEEEecCCCh--------hhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          218 NAVEFDKTALP--------VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       218 ~~i~~~~~~~~--------~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +.+++..+...        .....+.+.|+++|+++.+.+ +.|||.|++..|+++|++++++|+++++ ++
T Consensus       399 ~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-~vi~~~PpL~it~~ei~~~~~~l~~~l~-~~  468 (472)
T PRK08742        399 VAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPLG-DVLYWMPPYCVDEAQLALLADTTRHAID-EA  468 (472)
T ss_pred             EEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHH-HH
Confidence            99999643210        113467888999999998874 7999999999999999999999999998 64

>PLN00144 acetylornithine transaminase

Probab=100.00  E-value=1.6e-42  Score=313.21  Aligned_cols=270  Identities=37%  Similarity=0.631  Sum_probs=245.9

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.|||.|+++|||.+.++++++++..+...+.|..+++.++|++|++.|++.++.  .++++|++||+++++|...++++
T Consensus       111 r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~aavi~eP~q~~gg~~~~~~~  188 (382)
T PLN00144        111 ATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQK--GKTAAVFVEPVQGEGGIYPATKE  188 (382)
T ss_pred             cceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCC--CCeEEEEEccccCCCCCccCCHH
Confidence            4689999999999999999999987777788888889999999999999999863  57999999999999888888999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      |+++|+++|++||+++|+||+|+||++.|..++++.+++.||++++||++++|+ |+|++++++++++.+....+..++.
T Consensus       189 ~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PDi~t~sK~l~~G~-pig~v~~~~~~~~~~~~~~~~~T~~  267 (382)
T PLN00144        189 FLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPDIMTLAKPLAGGL-PIGAVLVTEKVASAINPGDHGSTFA  267 (382)
T ss_pred             HHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCCEEEecccccCCc-ceEEEEEcHHHHhccCCCCCCCCCC
Confidence            999999999999999999999999999998777778899999999999999998 9999999999999988777889999


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      +++++++++.++++.+.++++.+++++.++++++.|+++...+| .+..+++.|+++|+.+..     ....+++.++++
T Consensus       268 ~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~-~~~~vrg~G~~~~l~l~~-----~~~~~~~~~~~~  341 (382)
T PLN00144        268 GGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNP-HVKEVRGVGLLVGIQLDV-----PAGPLVDACRDS  341 (382)
T ss_pred             CCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCC-CceeeecCceEEEEEecC-----ccHHHHHHHHHC
Confidence            99999999999999999888999999999999999999877764 667888999999999842     346799999999


Q ss_pred             CceeccCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          242 GILAKPTH-DTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       242 Gi~~~~~~-~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ||.+.+.+ .+.||++|+...+++++++++++|++++. ++
T Consensus       342 Gv~i~~~~~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~-~~  381 (382)
T PLN00144        342 GLLVLTAGKGDVVRLVPPLVISEAELEQAVEILADCLP-AL  381 (382)
T ss_pred             CeEEeecCCCCEEEEeCCCccCHHHHHHHHHHHHHHHH-hc
Confidence            99999864 48999999998999999999999999987 54

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=2.3e-42  Score=318.23  Aligned_cols=276  Identities=30%  Similarity=0.512  Sum_probs=244.2

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-----------------HHHHHHHHHhcCCcEEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKESGDQIAGF   64 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~~~~~~~~v   64 (306)
                      |+|||+|+++|||.+.+++++++...+...+.|..+++..+|+++                 ++.+|+.+.++++++++|
T Consensus       139 r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAv  218 (466)
T PRK07030        139 KKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAV  218 (466)
T ss_pred             CcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence            578999999999999999999997777777778777776666554                 567788888777889999


Q ss_pred             EEcc-ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893           65 LFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA  143 (306)
Q Consensus        65 ~v~~-~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~  143 (306)
                      ++|| +++.+|.+.++++|+++|+++|++||+++|+||+++||||+|..|.++++++.||+++++|+++||+.|+|.+++
T Consensus       219 i~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~  298 (466)
T PRK07030        219 IVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLCLSKALTGGYLPLAAVLT  298 (466)
T ss_pred             EEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCCCEEeeehhccCCcccceEEEe
Confidence            9999 799999999999999999999999999999999999999999999999999999999999999999559999999


Q ss_pred             CHHHHhhcCC-------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893          144 DKEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL  216 (306)
Q Consensus       144 ~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~  216 (306)
                      ++++++.+..       ..+.+||.+|+++++++.++++.+.++++.++.+++++++++.|+++. .++ .+..+++.|+
T Consensus       299 ~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~-~~~-~v~~vrG~Gl  376 (466)
T PRK07030        299 TDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLA-DHP-HVAEVRQTGM  376 (466)
T ss_pred             cHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-cCC-CEEEeEecee
Confidence            9999987742       257889999999999999999999999999999999999999999985 564 7889999999


Q ss_pred             EEEEEEecCCCh--------hhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          217 FNAVEFDKTALP--------VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       217 ~~~i~~~~~~~~--------~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ++.+++..+...        .....+.+.|+++|+++.+.+ +.+|+.|++.+|++||++++++|+++++ ++
T Consensus       377 ~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-~~i~~~Ppl~it~~eid~~~~~l~~al~-~~  447 (466)
T PRK07030        377 ILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPLG-SVVYFLPPYVITPEQIDFLAEVASEGID-IA  447 (466)
T ss_pred             EEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEecC-CEEEEECCccCCHHHHHHHHHHHHHHHH-HH
Confidence            999998642210        113468899999999998864 6899999999999999999999999999 87

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=100.00  E-value=2.3e-42  Score=318.14  Aligned_cols=276  Identities=33%  Similarity=0.550  Sum_probs=241.9

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-----------------HHHHHHHHHhcC---CcE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKESG---DQI   61 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~~~---~~~   61 (306)
                      |++||.|+++|||++.+++++++.......+.|..+++.++|+++                 ++.+++.+++..   +++
T Consensus       153 r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~i  232 (464)
T PRK06938        153 RSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLP  232 (464)
T ss_pred             CCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCce
Confidence            579999999999999999999987666666777777765555532                 577888887532   469


Q ss_pred             EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceee
Q 021893           62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAV  141 (306)
Q Consensus        62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~  141 (306)
                      ++|++||++..+|.++++++||++++++|++||++||+||+++||||+|..|.++++++.||+++++|+++||+ |+|.+
T Consensus       233 AAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gKglggG~-PlsAv  311 (464)
T PRK06938        233 AAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLSKAIGGSL-PLAVV  311 (464)
T ss_pred             EEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCCEEEeeccccCCC-ceEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998 99999


Q ss_pred             EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893          142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE  221 (306)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~  221 (306)
                      ++++++ +.+.+..+.+||.+|+++++++.++++.+.++++.++.++++++++++|+++...++ .+..+++.|+++.++
T Consensus       312 ~~~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~-~i~~VrG~Glm~gie  389 (464)
T PRK06938        312 VYREWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYP-QLGDVRGRGLMLGVE  389 (464)
T ss_pred             eehhHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeeccceEEEEE
Confidence            998885 666666788999999999999999999999988999999999999999999987774 889999999999999


Q ss_pred             EecCCC-----------hhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          222 FDKTAL-----------PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       222 ~~~~~~-----------~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +..+..           ......+.+.|+++|+++.+.+  .+.+|+.|++.+|++|++++++++++++. ++
T Consensus       390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~-~~  461 (464)
T PRK06938        390 IVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVA-AA  461 (464)
T ss_pred             eccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHH-HH
Confidence            964210           1124568889999999998754  47999999999999999999999999998 64

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=100.00  E-value=2.8e-42  Score=314.52  Aligned_cols=272  Identities=32%  Similarity=0.573  Sum_probs=242.0

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCC--------CHHHHHHHHHhcC---CcEEEEEEcccc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG--------DITALEKIFKESG---DQIAGFLFEPIQ   70 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------d~~~le~~i~~~~---~~~~~v~v~~~~   70 (306)
                      |++||.|+++|||.+.++++++++......+.+..+++..+|++        +++.+++.+++++   +++++|++||++
T Consensus       125 r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~  204 (412)
T TIGR02407       125 RSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQ  204 (412)
T ss_pred             CCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEecccc
Confidence            57899999999999999999998777777777777777888874        3778999997653   468999999999


Q ss_pred             CCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccC-CcccceeeEeCHHHHh
Q 021893           71 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGG-GVIPVSAVLADKEVML  149 (306)
Q Consensus        71 ~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~-G~~~~g~~~~~~~~~~  149 (306)
                      +++|.++++++||++|+++|++||+++|+||+++||||.|..++++.+++.||++++||++++ |+ |+|++++++++ +
T Consensus       205 g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~~~K~lg~~G~-pigav~~~~~~-~  282 (412)
T TIGR02407       205 GEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVCLSKSISGYGL-PLALTLIKPEL-D  282 (412)
T ss_pred             CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEEechhccCCcc-ceeEEEEchhh-h
Confidence            999999999999999999999999999999999999999999888889999999999999998 98 99999999886 6


Q ss_pred             hcCCCCccCCCCCCHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCCh
Q 021893          150 CIQPGEHGSTFGGNPLASAVAIASLDV-IRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP  228 (306)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~aa~~al~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~  228 (306)
                      .+.+..+..+|.+|+++++++.++++. +.++++.+++++.+++++++|+.+...++..+..+++.|+++++.+++   .
T Consensus       283 ~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~---~  359 (412)
T TIGR02407       283 VWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGD---G  359 (412)
T ss_pred             ccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEecC---h
Confidence            666667888999999999999999995 777779999999999999999998877754567899999999999975   3


Q ss_pred             hhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          229 VSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       229 ~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .....+.+.|+++||++.+.+  .+.||++|++.+++++++.++++|+++++
T Consensus       360 ~~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~  411 (412)
T TIGR02407       360 DLAGKIAKAAFENGLIIETSGPNDEVIKLLPPLTIDEETLQQGLDILEQAVE  411 (412)
T ss_pred             HHHHHHHHHHHHCCCEEeccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence            456789999999999998653  47899999999999999999999999886

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=100.00  E-value=3.9e-42  Score=313.84  Aligned_cols=276  Identities=31%  Similarity=0.532  Sum_probs=247.4

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +++||+|+++|||.+.+++++++.+.+...+.|..+++..+|++|++.+++.++   +++++|++||+++++|.+.++++
T Consensus       128 r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~aaviiEPv~~~gg~~~~~~~  204 (406)
T PRK12381        128 KSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALID---DQTCAVIVEPIQGEGGVIPADKA  204 (406)
T ss_pred             CCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhcc---CCeeEEEEeCCcCCCCCcCCCHH
Confidence            578999999999999999999997777777888888888899999999999997   57999999999999998888999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      ++++|+++|++||+++|+||+|+|+++.|..+.++.+++.||++++||++++|+ |+|++++++++++.+....+..+|.
T Consensus       205 ~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~t~sK~l~gG~-~ig~~~~~~~~~~~~~~~~~~~t~~  283 (406)
T PRK12381        205 FLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTTAKALGGGF-PIGAMLTTEKCASVMTVGTHGTTYG  283 (406)
T ss_pred             HHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEEEehhhhhCCC-ceEEEEEcHHHHhhcCCCCCCCCCC
Confidence            999999999999999999999999999998776677889999999999999998 9999999999999998777888899


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      ++++.++++.++++.+.++++.++++++++++++.|+++...++ .+..+++.|.++++.+++.. ......+.+.|+++
T Consensus       284 ~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~~~vrg~Gl~~~~~l~~~~-~~~~~~~~~~l~~~  361 (406)
T PRK12381        284 GNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINARYG-LFSEIRGLGLLIGCVLNAEY-AGKAKQISQEAAKA  361 (406)
T ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCC-CEEEEecCeEEEEEEecCch-hhHHHHHHHHHHHC
Confidence            99999999999999998878999999999999999999876653 56788899999999886411 12456889999999


Q ss_pred             CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCCC
Q 021893          242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKM  284 (306)
Q Consensus       242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~~  284 (306)
                      ||.+.+.+++.+|++|++.+++++|++++++|+++++ ++.+.
T Consensus       362 Gv~v~~~g~~~lRl~p~~~~t~~~i~~~~~~l~~~l~-~~~~~  403 (406)
T PRK12381        362 GVMVLIAGPNVVRFAPALNISEEEITTGLDRFARACE-RFVSR  403 (406)
T ss_pred             CcEEeeCCCCEEEEeCCccCCHHHHHHHHHHHHHHHH-HHHhc
Confidence            9999887778999999999999999999999999998 77553

>PRK07483 hypothetical protein; Provisional

Probab=100.00  E-value=4.1e-42  Score=315.25  Aligned_cols=279  Identities=32%  Similarity=0.524  Sum_probs=241.2

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC----CC--------------HHHHHHHHHh-cCCcEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF----GD--------------ITALEKIFKE-SGDQIA   62 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d--------------~~~le~~i~~-~~~~~~   62 (306)
                      |+|||.|+++|||.+.+++++++.......+.|..+++..+++    ++              ++.+++++.+ ++++++
T Consensus       122 r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iA  201 (443)
T PRK07483        122 RRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDTVA  201 (443)
T ss_pred             CcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceE
Confidence            5789999999999999999999977777777777777655443    33              2577776653 446899


Q ss_pred             EEEEccccC-CCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceee
Q 021893           63 GFLFEPIQG-EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAV  141 (306)
Q Consensus        63 ~v~v~~~~~-~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~  141 (306)
                      +|++||++. .+|.+.++++||++|+++|++||+++|+||+++||||+|..|.++++++.||+++++|+++||+.|+|.+
T Consensus       202 AvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av  281 (443)
T PRK07483        202 AFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAV  281 (443)
T ss_pred             EEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeeeehhhhccCccccEEE
Confidence            999999997 5799999999999999999999999999999999999999998999999999999999999996699999


Q ss_pred             EeCHHHHhhcCCC----CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893          142 LADKEVMLCIQPG----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF  217 (306)
Q Consensus       142 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~  217 (306)
                      ++++++++.+...    .+++||.+|+++++++.++++.+.++++.+++++.++++++.|+++...++ .+..+++.|++
T Consensus       282 ~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vRG~Glm  360 (443)
T PRK07483        282 LASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHP-HVGDIRGRGLF  360 (443)
T ss_pred             EEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCC-CeeeEeecccE
Confidence            9999999887542    477899999999999999999999999999999999999999999877774 78899999999


Q ss_pred             EEEEEecCCC--------hhhHHHHHHHHHHCCceeccCC-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          218 NAVEFDKTAL--------PVSAYDICLKMKERGILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       218 ~~i~~~~~~~--------~~~~~~~~~~l~~~Gi~~~~~~-------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +.+++..+..        ......+.+.++++|+++.+.+       ++.+||.|++..++++|++++++|++++. ++.
T Consensus       361 ~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~-~~~  439 (443)
T PRK07483        361 VGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAID-AAL  439 (443)
T ss_pred             EEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-HHH
Confidence            9999864210        0124578899999999997653       46999999999999999999999999998 654

>PRK07481 hypothetical protein; Provisional

Probab=100.00  E-value=6.2e-42  Score=314.80  Aligned_cols=278  Identities=32%  Similarity=0.579  Sum_probs=239.4

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCccccc--------CC--CHHHH--------HHHHH-hcCCcEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD--------FG--DITAL--------EKIFK-ESGDQIA   62 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~--d~~~l--------e~~i~-~~~~~~~   62 (306)
                      |++||.|+++|||++.+++++++.+.....+.|..+++..++        ++  |.+.+        |+.|. +++++++
T Consensus       136 r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iA  215 (449)
T PRK07481        136 RTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIA  215 (449)
T ss_pred             CcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEE
Confidence            578999999999999999999987767777777777765443        33  54444        44444 3447899


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893           63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL  142 (306)
Q Consensus        63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~  142 (306)
                      +|++||+++.+|.+.++++|+++++++|++||++||+||+++||||.|..+.++.+++.||+++++|+++||+.|+|.++
T Consensus       216 AviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~  295 (449)
T PRK07481        216 AFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATM  295 (449)
T ss_pred             EEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEEeecccCCCcCceEEE
Confidence            99999999999999999999999999999999999999999999999999888999999999999999999955999999


Q ss_pred             eCHHHHhhcCC-------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893          143 ADKEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG  215 (306)
Q Consensus       143 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g  215 (306)
                      +++++++.+.+       ..+++||.+|+++++++.++++.+.++++.+++++.++++++.|+++...+ +.+..+++.|
T Consensus       296 ~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~-~~i~~vrG~G  374 (449)
T PRK07481        296 VNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERF-ELVGDVRGKG  374 (449)
T ss_pred             EcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEeecc
Confidence            99999988754       257789999999999999999999998999999999999999999998777 4788999999


Q ss_pred             eEEEEEEecCCC--------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          216 LFNAVEFDKTAL--------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       216 ~~~~i~~~~~~~--------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +++.+++..+..        ......+.+.|+++|+++.+.+ +.+|++|++.+|++||++++++|+++++ ++.
T Consensus       375 lm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g-~~i~l~Ppl~it~~eid~~~~~l~~~l~-~~~  447 (449)
T PRK07481        375 LMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPSG-TKIILSPPLVIQREDVDRIVDALDAGLS-AVP  447 (449)
T ss_pred             eEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHH-hcc
Confidence            999999854210        1124568889999999998874 4699999999999999999999999998 653

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=100.00  E-value=5.5e-42  Score=313.96  Aligned_cols=278  Identities=32%  Similarity=0.575  Sum_probs=242.0

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCC--------CHHHHHHHHHhcC---CcEEEEEEcccc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG--------DITALEKIFKESG---DQIAGFLFEPIQ   70 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------d~~~le~~i~~~~---~~~~~v~v~~~~   70 (306)
                      |++||+|+++|||++.+++++++++..+..+.|..+++..+|++        |++.+++.+++++   +++++|++||++
T Consensus       129 r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~  208 (425)
T PRK09264        129 RTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQ  208 (425)
T ss_pred             CCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEeccc
Confidence            57899999999999999999998776677777777777777774        7888999997642   468999999999


Q ss_pred             CCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccC-CcccceeeEeCHHHHh
Q 021893           71 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGG-GVIPVSAVLADKEVML  149 (306)
Q Consensus        71 ~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~-G~~~~g~~~~~~~~~~  149 (306)
                      +++|.+++++++|++|+++|++||+++|+||+|+|||+.|..+.++.+++.||++++||++++ |+ |+|++++++++ .
T Consensus       209 g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi~t~~K~l~~~G~-pigav~~~~~i-~  286 (425)
T PRK09264        209 GEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDIVTLSKSISGYGL-PMALVLIKPEL-D  286 (425)
T ss_pred             CCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCEEEeccccCCCcc-ceEEEEEchhh-h
Confidence            999999999999999999999999999999999999999998888889999999999999997 98 99999999887 4


Q ss_pred             hcCCCCccCCCCCCHHHHHHHHHHH-HHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCCh
Q 021893          150 CIQPGEHGSTFGGNPLASAVAIASL-DVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP  228 (306)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~aa~~al-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~  228 (306)
                      .+....+..+|.+|+++++++.+++ +.+.++++.+++++++++++++|+++...++.....+++.|+++++.+.+   .
T Consensus       287 ~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~---~  363 (425)
T PRK09264        287 VWKPGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGD---G  363 (425)
T ss_pred             ccCCCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecC---h
Confidence            5655567788999999999999999 56666679999999999999999998766643346788999999999874   3


Q ss_pred             hhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCCCC
Q 021893          229 VSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMR  285 (306)
Q Consensus       229 ~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~~~  285 (306)
                      .....+++.|+++||.+.+.+  ...||++|++.+|++++++++++|+++++ ++.+..
T Consensus       364 ~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~-~~~~~~  421 (425)
T PRK09264        364 ELAGKIAAEAFENGLIIETSGPEDEVVKLLPPLTIDEEELEEGLDILEEAVA-EVLAEE  421 (425)
T ss_pred             HHHHHHHHHHHHCCCEEeccCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH-HHHhcc
Confidence            456789999999999998754  47999999999999999999999999999 765433

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=100.00  E-value=1.3e-41  Score=315.16  Aligned_cols=276  Identities=28%  Similarity=0.476  Sum_probs=236.6

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC------------------HHHHHHHHHh-cCCcEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKE-SGDQIA   62 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~i~~-~~~~~~   62 (306)
                      +.+||+|+++|||.+++++++++.+.+...+.+..+++..+++++                  .++||+++.+ ++++++
T Consensus       183 r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iA  262 (504)
T PLN02760        183 KKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIA  262 (504)
T ss_pred             CcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceE
Confidence            478999999999999999999887666556655545444444321                  2457877753 346799


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893           63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL  142 (306)
Q Consensus        63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~  142 (306)
                      +|++||+++++|.+.++++|+++|+++|++||++||+||+++||||.|..+.++++++.||+++++|+++||+.|+|.++
T Consensus       263 AvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgK~lggG~~PigAv~  342 (504)
T PLN02760        263 AFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVL  342 (504)
T ss_pred             EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEEecccccCCccccceEe
Confidence            99999999999999999999999999999999999999999999999999989999999999999999998866999999


Q ss_pred             eCHHHHhhcCC-------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893          143 ADKEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG  215 (306)
Q Consensus       143 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g  215 (306)
                      +++++++.+..       ..++.||.+|+++++++.++++.+.++++.++++++.+++++.|+++ ..+ +.+..+++.|
T Consensus       343 ~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l-~~~-~~v~~vrG~G  420 (504)
T PLN02760        343 VSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAF-SGS-PIIGEIRGTG  420 (504)
T ss_pred             ecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-hcC-CCeeeEEeCc
Confidence            99999988753       25788999999999999999999999899999999999999999998 555 4788999999


Q ss_pred             eEEEEEEecCCCh--------hhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          216 LFNAVEFDKTALP--------VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       216 ~~~~i~~~~~~~~--------~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +++.+++.++...        .....+.+.|+++||++.+.+ +.+|++|++.+|++||++++++|++++. ++
T Consensus       421 l~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-~~lrl~Ppl~it~eeid~~~~~l~~al~-~~  492 (504)
T PLN02760        421 LILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAG-DNIMMSPPLIITPEEVDELISIYGKALK-AT  492 (504)
T ss_pred             eEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHH-HH
Confidence            9999998643210        114568899999999998864 5899999999999999999999999998 65

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=2.8e-41  Score=308.45  Aligned_cols=278  Identities=36%  Similarity=0.662  Sum_probs=243.8

Q ss_pred             cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCcccccCCC----------HHHHHHHHHh--cCCcEEEEEEcc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFGD----------ITALEKIFKE--SGDQIAGFLFEP   68 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d----------~~~le~~i~~--~~~~~~~v~v~~   68 (306)
                      |++||.|+++|||.+.+++++++. ......+.|..+++.++|+++          ++.+++.+++  .++++++|++||
T Consensus       127 r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EP  206 (425)
T PRK07495        127 RSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEP  206 (425)
T ss_pred             CCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECC
Confidence            578999999999999999998875 346677777778888888765          5566877763  346799999999


Q ss_pred             ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893           69 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM  148 (306)
Q Consensus        69 ~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~  148 (306)
                      +++++|.++++++++++|+++|++||+++|+||+|+||++.|..+.++.+++.||++++||++++|+ |+|+++++++++
T Consensus       207 v~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~~G~-pigav~~~~~i~  285 (425)
T PRK07495        207 VQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADLTTMAKGLAGGF-PLAAVTGRAEIM  285 (425)
T ss_pred             ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCCEEeehhhhcCCc-cceEEEEcHHHH
Confidence            9999998889999999999999999999999999999999998888888899999999999999998 999999999999


Q ss_pred             hhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC-
Q 021893          149 LCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-  227 (306)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~-  227 (306)
                      +.+....+..+|.+++++++++.++++.+.++++.+++++++++++++|+++...+| .+..+++.|+++++++.+... 
T Consensus       286 ~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrG~Gl~~~iel~~~~~~  364 (425)
T PRK07495        286 DAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQRLASLRETVP-EIADIRGPGFMNAVEFNDADSG  364 (425)
T ss_pred             hccCCCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhhCC-CeeeeecCceEEEEEEecCCCC
Confidence            988877788899999999999999999999888999999999999999999987774 678899999999999964220 


Q ss_pred             ---hhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          228 ---PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       228 ---~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                         ......+.+.++++|+++.+.+  .+.+||.|++..|++++++++++|+++++ ++.
T Consensus       365 ~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r~~Ppl~it~~~id~~~~~l~~~l~-~~~  423 (425)
T PRK07495        365 LPSAEFANRVRLKALEKGLILLTCGVHGNVIRFLAPITIQDDVFAEALDILEASIL-EAS  423 (425)
T ss_pred             CccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHH-HHh
Confidence               1124568899999999987643  47999999999999999999999999998 654

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=1.2e-41  Score=313.59  Aligned_cols=278  Identities=31%  Similarity=0.583  Sum_probs=243.4

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCC-----------------CHHHHHHHHHhcCCcEEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----------------DITALEKIFKESGDQIAGF   64 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------d~~~le~~i~~~~~~~~~v   64 (306)
                      |++||.|+++|||.+.+++++++...++..+.|..+++..+|++                 +++.+|+.++++++++++|
T Consensus       148 r~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAv  227 (460)
T PRK06916        148 KQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAI  227 (460)
T ss_pred             CcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEE
Confidence            57999999999999999999999877777787877776665543                 2567788888777889999


Q ss_pred             EEcc-ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893           65 LFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA  143 (306)
Q Consensus        65 ~v~~-~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~  143 (306)
                      ++|| +++.+|.++++++||++++++|++||+++|+||+++||||.|..|.++++++.||+++++|+++||+.|+|.+++
T Consensus       228 i~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~  307 (460)
T PRK06916        228 IVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIMTAGKGLTGGYLPIAITVT  307 (460)
T ss_pred             EEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCeeeeehhhhcCccccceeee
Confidence            9999 699999999999999999999999999999999999999999999899999999999999999999559999999


Q ss_pred             CHHHHhhcCC-------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893          144 DKEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL  216 (306)
Q Consensus       144 ~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~  216 (306)
                      ++++++.+..       ..+.+||.+|+++++++.++++.+.++++.++++++.+++++.|+++.. + +.+..+++.|+
T Consensus       308 ~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~-~-~~v~~vrG~Gl  385 (460)
T PRK06916        308 TDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFA-L-KHVGDIRQLGL  385 (460)
T ss_pred             cHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-C-CCeEEeecCCc
Confidence            9999987642       2477899999999999999999999988999999999999999999864 5 36789999999


Q ss_pred             EEEEEEecCCC-------h-hhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          217 FNAVEFDKTAL-------P-VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       217 ~~~i~~~~~~~-------~-~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      ++.+++..+..       . .....+.+.|+++|+++.+.+ +.+|+.|++.++++||++++++|+++++ ++..
T Consensus       386 m~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-~~l~~~Ppl~it~~~id~~~~~l~~~l~-~~~~  458 (460)
T PRK06916        386 MVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPLG-NTIVFMPPLASTIDELDEMLRILYKAIS-DVTE  458 (460)
T ss_pred             eeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEecC-CEEEEeCCcccCHHHHHHHHHHHHHHHH-hhcc
Confidence            99999864321       0 113578899999999998864 6899999999999999999999999998 7653

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=2.5e-41  Score=310.42  Aligned_cols=279  Identities=32%  Similarity=0.595  Sum_probs=242.7

Q ss_pred             cceEEEEecCCCCcccchhcccCCc-cccccCCCCCCCcccccCCCH-----------------HHHHHHHHhc--CCcE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFGDI-----------------TALEKIFKES--GDQI   61 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~-----------------~~le~~i~~~--~~~~   61 (306)
                      |++||.|+++|||++.+++++++.. .....+.|..+++..+|++|.                 +.+++.+++.  ++++
T Consensus       129 r~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  208 (445)
T PRK08593        129 RPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEV  208 (445)
T ss_pred             CCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCce
Confidence            5789999999999999999998843 345667777788777776542                 4455555432  3679


Q ss_pred             EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceee
Q 021893           62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAV  141 (306)
Q Consensus        62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~  141 (306)
                      ++|++||+++++|.+.++++||++|+++|++||++||+||+|+|||+.|..+.++.+++.||++++||++++|+ |+|++
T Consensus       209 AavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~t~gK~l~~G~-p~gav  287 (445)
T PRK08593        209 ACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLMSFGKSLAGGM-PMSAI  287 (445)
T ss_pred             EEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEeeecccccCCc-ccEEE
Confidence            99999999999999999999999999999999999999999999999999887888899999999999999998 99999


Q ss_pred             EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893          142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE  221 (306)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~  221 (306)
                      ++++++++.+....+..|+.+++++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+++.|+++.+.
T Consensus       288 ~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~v~~vrG~Gl~~gi~  366 (445)
T PRK08593        288 VGRKEIMESLEAPAHLFTTGANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYN-FVGDVRGYGLSIGID  366 (445)
T ss_pred             EEcHHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeccceEEEEE
Confidence            9999999988766677799999999999999999999888999999999999999999887774 888999999999998


Q ss_pred             EecCC-----ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          222 FDKTA-----LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       222 ~~~~~-----~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      +..+.     .......+++.|+++||++.+...+.+|++|++.+|++||+.++++++++++ ++.+
T Consensus       367 l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~-~~~~  432 (445)
T PRK08593        367 IVSDKKLKTRDNEAALKICNYCFEHGVVIIAVAGNVLRFQPPLVITYEQLDTALNTIEQAFT-ALEA  432 (445)
T ss_pred             EecCCCcCCCcHHHHHHHHHHHHHCCeEEeccCCCEEEEECCCccCHHHHHHHHHHHHHHHH-HHhc
Confidence            86421     1123567899999999999876668999999999999999999999999999 7754

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=100.00  E-value=2.2e-41  Score=311.51  Aligned_cols=277  Identities=32%  Similarity=0.549  Sum_probs=239.6

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-------------HHHH----HHHHHh---cCCcE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-------------ITAL----EKIFKE---SGDQI   61 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-------------~~~l----e~~i~~---~~~~~   61 (306)
                      |++||.|+++|||++.++++++++...+..+.|..+++..+|+++             .+.+    ++.+.+   .++++
T Consensus       147 r~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  226 (459)
T PRK06931        147 RSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKP  226 (459)
T ss_pred             CCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCce
Confidence            578999999999999999999987767777778888877777664             2333    333432   23569


Q ss_pred             EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceee
Q 021893           62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAV  141 (306)
Q Consensus        62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~  141 (306)
                      ++|++||++..+|.++++++||++++++|++||+++|+||+++||||.|..++++++++.||+++++|+++||+ |+|.+
T Consensus       227 AAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~gK~l~gG~-Pi~av  305 (459)
T PRK06931        227 AAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVMSKAVGGGL-PLAVL  305 (459)
T ss_pred             EEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEecccccCCc-ceeee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998 99998


Q ss_pred             EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893          142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE  221 (306)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~  221 (306)
                      +.++++ +.+.+..+.+||.+|+++++++.++++.+.++++.++.++.++++++.|+++...+| .+..+++.|+++.++
T Consensus       306 ~~~~~~-~~~~~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~-~i~~vrG~Glm~gie  383 (459)
T PRK06931        306 GIKKEF-DAWQPGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYP-CIGNVRGRGLMIGIE  383 (459)
T ss_pred             eeHHHH-hhccCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEeEecCceEEEEE
Confidence            888774 777666788999999999999999999999989999999999999999999987775 789999999999999


Q ss_pred             EecCCC-----------hhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          222 FDKTAL-----------PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       222 ~~~~~~-----------~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +..+..           ......+.+.|+++|+++.+.+  .+.+|+.|++.+|++++++++++|++++. ++.
T Consensus       384 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~-~~~  456 (459)
T PRK06931        384 IVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRNGNVVRLLPPLLITQAECEEFIDRFEQALL-AAV  456 (459)
T ss_pred             EccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHH-HHH
Confidence            864210           1124567888999999997653  57899999999999999999999999998 653

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=100.00  E-value=2.2e-41  Score=308.62  Aligned_cols=271  Identities=34%  Similarity=0.546  Sum_probs=238.0

Q ss_pred             cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCccccc-----------CCCHHHHHHHHHhcCCcEEEEEEccc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVD-----------FGDITALEKIFKESGDQIAGFLFEPI   69 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----------~~d~~~le~~i~~~~~~~~~v~v~~~   69 (306)
                      |+|||.|+++|||.+.++++++++ ......|.|..+++..+|           ++|++.+++.++++++++++|++||+
T Consensus       134 r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi  213 (428)
T PRK07986        134 RQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPI  213 (428)
T ss_pred             CcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEech
Confidence            579999999999999999999874 334556667666654433           35778999999876678999999996


Q ss_pred             -cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893           70 -QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM  148 (306)
Q Consensus        70 -~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~  148 (306)
                       +..+|.+.+++++|++|+++|++||++||+||+|+|||+.|..|.++++++.||+++++|+++||+.++|.++++++++
T Consensus       214 ~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~  293 (428)
T PRK07986        214 VQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVA  293 (428)
T ss_pred             hcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCCEEEechhhhCCcccCcchhchHHHH
Confidence             8888988999999999999999999999999999999999999988999999999999999999955999999999999


Q ss_pred             hhcCCC-----CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893          149 LCIQPG-----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD  223 (306)
Q Consensus       149 ~~~~~~-----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~  223 (306)
                      +.+...     .++.||.+|+++++++.++++.+.++++.++++++.+++++.|+++.. ++ .+.++++.|+++.+++.
T Consensus       294 ~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~~-~~-~i~~vRg~Gl~~~ve~~  371 (428)
T PRK07986        294 ETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLREELAPLRD-AP-MVADVRVLGAIGVVETT  371 (428)
T ss_pred             HHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhc-CC-CEEeEeccceEEEEEeC
Confidence            988653     377899999999999999999999888999999999999999999754 53 67899999999999886


Q ss_pred             cCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          224 KTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       224 ~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .   ......+.+.|+++|+++.+.+ +.+|+.|++.+|+++|++++++|+++++
T Consensus       372 ~---~~~~~~~~~~l~~~Gl~~~~~g-~~i~~~Ppl~it~~ei~~~~~~l~~~l~  422 (428)
T PRK07986        372 R---PVNMAALQRFFVEQGVWIRPFG-KLIYLMPPYIILPEQLQRLTAAVNRAVQ  422 (428)
T ss_pred             C---cccHHHHHHHHHHCCcEEEecC-CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence            4   2345678999999999998874 6999999999999999999999999987

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=100.00  E-value=4.5e-41  Score=305.86  Aligned_cols=268  Identities=40%  Similarity=0.737  Sum_probs=240.5

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +++||+++++|||.+..++.+++.+.....+.|..+++..++++|++.+++.++   +++++|++||+++++|.++++++
T Consensus       120 r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~avivep~~~~~G~~~~~~~  196 (389)
T PRK01278        120 RYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAIT---PNTAAILIEPIQGEGGIRPAPDE  196 (389)
T ss_pred             CCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhC---CCeEEEEEecccCCCCCcCCCHH
Confidence            458999999999999999999887666666667677788899999999999997   47999999999999998899999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      ++++|+++|++||++||+||+|+|+++.|..+..+.+++.||++++||++++|+ |+|++++++++++.+....+..+++
T Consensus       197 ~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G~-~ig~~~~~~~~~~~~~~~~~~~t~~  275 (389)
T PRK01278        197 FLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMAVAKGIGGGF-PLGACLATEEAAKGMTPGTHGSTYG  275 (389)
T ss_pred             HHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEEEehhccCCc-ceEEEEEcHHHHhccCCCCCCCCCC
Confidence            999999999999999999999999999998776677789999999999999998 9999999999999988878888999


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      .++++++++.++++.+.++++.++++++.++++++|+.+...+++.+..+++.|.++++.+..     +..++++.|+++
T Consensus       276 ~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~-----~~~~~~~~l~~~  350 (389)
T PRK01278        276 GNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVV-----PNRDLVQALRDE  350 (389)
T ss_pred             ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEec-----CHHHHHHHHHHC
Confidence            999999999999999877778899999999999999998766543566788899999987752     467899999999


Q ss_pred             CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ||.+.|.+.+++||+|++.++++++++++++|+++++
T Consensus       351 GV~~~p~~~~~lR~~p~~~~~~~~i~~~l~~l~~~l~  387 (389)
T PRK01278        351 GLLTVGAGDNVVRLLPPLIITEEEIDEALERLERAAE  387 (389)
T ss_pred             CeEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHH
Confidence            9999998888999999999999999999999999887

>PRK06105 aminotransferase; Provisional

Probab=100.00  E-value=4e-41  Score=310.06  Aligned_cols=277  Identities=30%  Similarity=0.490  Sum_probs=240.9

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC------------------HHHHHHHHHhc-CCcEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKES-GDQIA   62 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~i~~~-~~~~~   62 (306)
                      |++||.|.++|||.+.+++++++.......+.|..+++..+|+++                  ++++|+++.+. +++++
T Consensus       141 r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iA  220 (460)
T PRK06105        141 KKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIA  220 (460)
T ss_pred             CcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceE
Confidence            578999999999999999999886666667777777776666653                  36788888643 46799


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893           63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL  142 (306)
Q Consensus        63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~  142 (306)
                      +|++||+++++|.++++++||++++++|++||+++|+||+++|||+.|..|.++++++.||++++||+++||+.|+|.++
T Consensus       221 avIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~gK~lggG~~P~~av~  300 (460)
T PRK06105        221 AFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILVMSKQLSSSYQPLSAVL  300 (460)
T ss_pred             EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCCCCeeeeecccccCcccceEEE
Confidence            99999999999999999999999999999999999999999999999999888999999999999999998844999999


Q ss_pred             eCHHHHhhcCCC-------CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893          143 ADKEVMLCIQPG-------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG  215 (306)
Q Consensus       143 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g  215 (306)
                      +++++++.+...       .+..|+.+|+++++++.++++.+.++++.+++++++++++++|+++ ..+ +.+..+++.|
T Consensus       301 ~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l-~~~-~~v~~vrG~G  378 (460)
T PRK06105        301 MNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRAL-ADH-PLVGEVRGVG  378 (460)
T ss_pred             EcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh-hcC-CCeEEEEecc
Confidence            999998877532       3678999999999999999999999999999999999999999998 666 4788999999


Q ss_pred             eEEEEEEecCCC--------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          216 LFNAVEFDKTAL--------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       216 ~~~~i~~~~~~~--------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +++.+++..+..        ......+...++++|+++.+.+ +.+|++|++.+|++||++++++|.++++ ++.
T Consensus       379 l~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~g-~~i~l~Ppl~it~~eid~~~~~l~~~l~-~~~  451 (460)
T PRK06105        379 LIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAMG-DTLAFCPPLIITAAQVDEMVDRFGRALD-DVA  451 (460)
T ss_pred             eEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEecC-CEEEEECCCccCHHHHHHHHHHHHHHHH-HHH
Confidence            999999864210        1123568889999999998864 6999999999999999999999999998 653

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=100.00  E-value=6e-41  Score=307.45  Aligned_cols=276  Identities=33%  Similarity=0.557  Sum_probs=238.5

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC------------------HHHHHHHHHhc-CCcEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKES-GDQIA   62 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~i~~~-~~~~~   62 (306)
                      |++||+|+++|||.+.+++++++....+..|.|..+++..+|++.                  ++.||++++.+ +++++
T Consensus       138 r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~a  217 (442)
T PRK13360        138 RTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIA  217 (442)
T ss_pred             CcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEE
Confidence            568999999999999999999998777777777777766666542                  46888888754 36799


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893           63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL  142 (306)
Q Consensus        63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~  142 (306)
                      +|++||+++++|.+.++++||++|+++|++||++||+||+|+|||+.|..+.++++++.||++++||++++|+.|+|.++
T Consensus       218 avivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDivt~gK~l~gG~~P~gav~  297 (442)
T PRK13360        218 AVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVF  297 (442)
T ss_pred             EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCceeeeeeccccCccceEEEE
Confidence            99999999999999999999999999999999999999999999999999888899999999999999998844999999


Q ss_pred             eCHHHHhhcCCC-------CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893          143 ADKEVMLCIQPG-------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG  215 (306)
Q Consensus       143 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g  215 (306)
                      +++++++.+...       .+..||.+|+++++++.++++.+.++++.++++++.+++++.|+++.. ++ .+.++++.|
T Consensus       298 ~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~-~~-~v~~vrG~G  375 (442)
T PRK13360        298 VSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLLTRAARLAPYWEDALHSLRD-AP-HVIDIRNLG  375 (442)
T ss_pred             EcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc-CC-Ceeeeeccc
Confidence            999999876532       366789999999999999999999888999999999999999998754 53 677899999


Q ss_pred             eEEEEEEecCC--ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          216 LFNAVEFDKTA--LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       216 ~~~~i~~~~~~--~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +++.+.+....  .......+.+.|+++||++.+.+ +.+||+|++.+|+++|++++++|+++++ ++
T Consensus       376 l~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~-~~lr~~Ppl~~t~~eid~~~~~l~~~l~-~~  441 (442)
T PRK13360        376 LVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYTG-DILALSPPLIIEEAQIDELFDILAQALK-ET  441 (442)
T ss_pred             eEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEecC-CEEEEeCCCccCHHHHHHHHHHHHHHHH-Hh
Confidence            99888875421  11235578889999999998764 6899999999999999999999999987 53

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=6.5e-41  Score=308.21  Aligned_cols=275  Identities=31%  Similarity=0.587  Sum_probs=233.6

Q ss_pred             cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCccccc----CCCH--------HHHHHHHH---h--cCCcEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVD----FGDI--------TALEKIFK---E--SGDQIAG   63 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~d~--------~~le~~i~---~--~~~~~~~   63 (306)
                      +.+||+|.++|||.+.+++++++. ......+.|..+++..+|    +++.        +.+++.++   +  .++++++
T Consensus       143 r~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAa  222 (443)
T PRK06058        143 RQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAA  222 (443)
T ss_pred             CCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEE
Confidence            578999999999999999998874 234555666666654333    3231        22222221   1  2367999


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA  143 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~  143 (306)
                      |++||+++.+|.+.++++||++|+++|++||+++|+||+++||+|.|..|.++++++.||+++++|+++||+ |+|++++
T Consensus       223 vi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~gK~l~~G~-Pi~av~~  301 (443)
T PRK06058        223 VIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLITTAKGIAGGL-PLSAVTG  301 (443)
T ss_pred             EEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEEcccccCCC-ccEEEEE
Confidence            999999999999999999999999999999999999999999999999888888999999999999999998 9999999


Q ss_pred             CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893          144 DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD  223 (306)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~  223 (306)
                      ++++++.+....+.+||.+|+++++++.++++.+.++++.+++++++++++++|+++...++ .+..+++.|+++.+.+.
T Consensus       302 ~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrg~G~~~~i~~~  380 (443)
T PRK06058        302 RAEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDD-RIGDVRGRGAMIAIELV  380 (443)
T ss_pred             cHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCC-cEEeeeccceEEEEEEe
Confidence            99999998877788999999999999999999998889999999999999999999877763 78899999999999986


Q ss_pred             cCC----ChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          224 KTA----LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       224 ~~~----~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .+.    .......+.+.|+++||++.+.+  .++||+.|++.+|+++|++++++|+++++
T Consensus       381 ~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~  441 (443)
T PRK06058        381 KPGTTEPDAELTKALAAAAHAAGVIVLTCGTYGNVIRLLPPLVIGDELLREGLDVLEAALA  441 (443)
T ss_pred             cCCCCCCcHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCccCHHHHHHHHHHHHHHHH
Confidence            421    11235568888999999998754  47999999999999999999999999987

>PRK06062 hypothetical protein; Provisional

Probab=100.00  E-value=5.3e-41  Score=308.58  Aligned_cols=277  Identities=30%  Similarity=0.541  Sum_probs=236.1

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCccccc--------C---CC-------HHHHHHHHHhc-CCcEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD--------F---GD-------ITALEKIFKES-GDQIA   62 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~d-------~~~le~~i~~~-~~~~~   62 (306)
                      |++||.|.++|||++.+++++++.+.... ..|..+++..++        +   +|       ++.+|++++.. +++++
T Consensus       138 r~~ii~~~~~yHG~t~~als~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iA  216 (451)
T PRK06062        138 RPKVLSAYRSYHGGTGSAINLTGDPRRWP-NDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIA  216 (451)
T ss_pred             CceEEEEeCCCCCCCHHHHhhcCCccccc-CCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceE
Confidence            57999999999999999999988543332 234445543322        2   23       67888888754 36799


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893           63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL  142 (306)
Q Consensus        63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~  142 (306)
                      +|++||+++++|.+.++++||++|+++|++||++||+||+++||||.|..|.++++++.||+++++|++++|+.|+|.++
T Consensus       217 aviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~gK~lggG~~Pigav~  296 (451)
T PRK06062        217 AILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVA  296 (451)
T ss_pred             EEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCeeeechhhhcCCcCcEEEE
Confidence            99999999999999999999999999999999999999999999999999888999999999999999999966999999


Q ss_pred             eCHHHHhhcCCC--CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHH-HHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893          143 ADKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLG-EELRQHLFKIQQQFPNYVKEVRGRGLFNA  219 (306)
Q Consensus       143 ~~~~~~~~~~~~--~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~-~~l~~~L~~~~~~~~~~~~~~~~~g~~~~  219 (306)
                      +++++++.+...  .+..||++|+++++++.++++.+.++++.++.++.+ +++++.|+++...++ .+..+++.|+++.
T Consensus       297 ~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~-~v~~vrG~Gl~~g  375 (451)
T PRK06062        297 ISEAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHP-SVGEVRGLGVFWA  375 (451)
T ss_pred             EcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCC-cEEeEeccccEEE
Confidence            999999988643  477799999999999999999999888999999998 699999999887774 7789999999999


Q ss_pred             EEEecCCC------h-----hhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          220 VEFDKTAL------P-----VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       220 i~~~~~~~------~-----~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +++..+..      .     .....+.+.|+++||++.+. .+.+|++|++.+|++||++++++|+++++ ++.
T Consensus       376 ve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~-~~~lrl~ppl~~t~~eid~~~~~l~~~l~-~~~  447 (451)
T PRK06062        376 LELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVN-GNRIHVVPPCTVTEDEVREGLAILDAALA-VAD  447 (451)
T ss_pred             EEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEeec-CCEEEEECCccCCHHHHHHHHHHHHHHHH-Hhh
Confidence            99863210      0     12457889999999998875 56899999999999999999999999998 654

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=100.00  E-value=6.1e-41  Score=308.12  Aligned_cols=276  Identities=30%  Similarity=0.523  Sum_probs=237.9

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCH-----------------HHHHHHHHh---cCCcE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDI-----------------TALEKIFKE---SGDQI   61 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-----------------~~le~~i~~---~~~~~   61 (306)
                      |++||+|.++|||.+.+++++++...++..+.|..+++..+|+++.                 +.+++.+++   ..+++
T Consensus       128 r~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  207 (442)
T TIGR00709       128 RTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKP  207 (442)
T ss_pred             CCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCce
Confidence            5789999999999999999999866666777777777766666542                 224444432   23579


Q ss_pred             EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceee
Q 021893           62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAV  141 (306)
Q Consensus        62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~  141 (306)
                      ++|++||+++++|.++++++|+++|+++|++||+++|+||+++||||.|..++++++++.||++++||++++|+ |+|++
T Consensus       208 aavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~~G~-Pigav  286 (442)
T TIGR00709       208 AAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVVMSKAVGGGL-PLAVL  286 (442)
T ss_pred             EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEEEcccccCCc-ccEEE
Confidence            99999999999999999999999999999999999999999999999999888888999999999999999998 99999


Q ss_pred             EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893          142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE  221 (306)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~  221 (306)
                      +++++ ++.+....+.+||.+|+++++++.++++.+.++++.++++++++++++.|+++...++ .+..+++.|+++.++
T Consensus       287 ~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~v~~vrG~Gl~~~ie  364 (442)
T TIGR00709       287 LIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHP-CIGNVRGRGLMQGIM  364 (442)
T ss_pred             EEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeeccceEEEEE
Confidence            99988 5666555678899999999999999999998888999999999999999999987774 788999999999999


Q ss_pred             EecCCC-----------hhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          222 FDKTAL-----------PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       222 ~~~~~~-----------~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +.++..           ......+...|+++|+++.+.+  .+.+|+.|++.+|+++++++++++++++. ++
T Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~-~~  436 (442)
T TIGR00709       365 IVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVFRLLCPITIDQEECEEGISRFKQAVE-EA  436 (442)
T ss_pred             EccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-HH
Confidence            964310           0124568888999999997653  67999999999999999999999999998 65

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=8.5e-41  Score=305.55  Aligned_cols=275  Identities=36%  Similarity=0.658  Sum_probs=239.1

Q ss_pred             cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCcccccCCC----------HHHHHHHHHh--cCCcEEEEEEcc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFGD----------ITALEKIFKE--SGDQIAGFLFEP   68 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d----------~~~le~~i~~--~~~~~~~v~v~~   68 (306)
                      |++||.|+++|||.+.+++++++. ..+...+.|..+++..+++++          ++.+++.+++  +++++++|++||
T Consensus       127 r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Ep  206 (421)
T PRK06777        127 RPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEP  206 (421)
T ss_pred             CCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECC
Confidence            578999999999999999998875 335566677777777777664          6678888874  456899999999


Q ss_pred             ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893           69 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM  148 (306)
Q Consensus        69 ~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~  148 (306)
                      +++++|..+++++++++|+++|++||+++|+||+|+||++.|..+++..+++.||++++||++++|+ |+|+++++++++
T Consensus       207 v~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv~~sK~l~~G~-pigav~~~~~i~  285 (421)
T PRK06777        207 IQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLITMAKSLGGGM-PISAVVGRAEVM  285 (421)
T ss_pred             ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEEeeehhhcCCC-ceEEEEEcHHHH
Confidence            9999998899999999999999999999999999999999998887888899999999999999999 999999999999


Q ss_pred             hhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC-
Q 021893          149 LCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-  227 (306)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~-  227 (306)
                      +.+....+..++++|+++++++.++++.+.++++.+++++++++++++|+++...++ .+..+++.|.++.+.+..... 
T Consensus       286 ~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrg~G~~~~i~~~~~~~~  364 (421)
T PRK06777        286 DAPAPGGLGGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCP-AIVDIRARGSMVAVEFNDPQTG  364 (421)
T ss_pred             hccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCC-CeEEecCceEEEEEEEecCccC
Confidence            998877788899999999999999999998888999999999999999999977664 778899999999987764210 


Q ss_pred             ---hhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          228 ---PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       228 ---~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                         ......+.+.++++||++.|++  .+++||+|++..+++++++++++|++++.
T Consensus       365 ~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~lr~~ppl~i~~~~i~~~~~~l~~~l~  420 (421)
T PRK06777        365 KPSPEFTRQYQRQALEEGLLLLSCGVHGNVIRFLYPLTIPDAQFSKALNILTRLLA  420 (421)
T ss_pred             CccHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence               1124456777889999998864  47999999999999999999999998875

>PRK07036 hypothetical protein; Provisional

Probab=100.00  E-value=8.4e-41  Score=308.17  Aligned_cols=276  Identities=28%  Similarity=0.505  Sum_probs=237.1

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-----------------HHHHHHHHHh-cCCcEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKE-SGDQIAG   63 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~-~~~~~~~   63 (306)
                      |++||.|+++|||++.+++++++++..+..|.|..+++..+|.++                 ++.+++.+.. .++++++
T Consensus       144 r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAa  223 (466)
T PRK07036        144 KKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAA  223 (466)
T ss_pred             ccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEE
Confidence            579999999999999999999997777777777666655544433                 2445666654 4478999


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccc-cCCCCCcEEEecccccCCcccceeeE
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD-WEEVRPDMVILGKALGGGVIPVSAVL  142 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~-~~~~~~d~~s~sK~~~~G~~~~g~~~  142 (306)
                      |++||+++++|.+.++++|+++|+++|++||+++|+||+++||||.|..+.++ .+++.||+++++|++++|+.|+|.++
T Consensus       224 vi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~gK~l~gG~~Pi~av~  303 (466)
T PRK07036        224 FIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVI  303 (466)
T ss_pred             EEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCCCCEEEEccccccCccccEEEE
Confidence            99999999999999999999999999999999999999999999999988777 78999999999999999955999999


Q ss_pred             eCHHHHhhcCC-------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893          143 ADKEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG  215 (306)
Q Consensus       143 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g  215 (306)
                      +++++++.+..       ..+++||.+|+++++++.++++.+.++++.+++++++++++++|+++ ..+ +.+..+++.|
T Consensus       304 ~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l-~~~-~~v~~vrG~G  381 (466)
T PRK07036        304 ISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASL-REL-PLVGDVRGDH  381 (466)
T ss_pred             EcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-ccC-CCEEEEEeec
Confidence            99999988753       24667999999999999999999998899999999999999999987 455 4788999999


Q ss_pred             eEEEEEEecCCC--------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          216 LFNAVEFDKTAL--------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       216 ~~~~i~~~~~~~--------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +++.+++..+..        ......+.+.|+++|+++.+.+ +.+|++|++.+|++||++++++|+++++ ++
T Consensus       382 l~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-~~~~l~Ppl~it~~~id~~~~~l~~al~-~~  453 (466)
T PRK07036        382 LMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLE-HLCVLSPPLIITRAQIDEIVAILRAAIE-ET  453 (466)
T ss_pred             eEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeecC-CEEEEeCCCcCCHHHHHHHHHHHHHHHH-HH
Confidence            999999964321        0124568889999999998864 6899999999999999999999999998 65

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=3.8e-41  Score=307.40  Aligned_cols=274  Identities=31%  Similarity=0.513  Sum_probs=237.9

Q ss_pred             cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCcccccCC-----------CHHHHHHHHHhcCCcEEEEEEccc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFG-----------DITALEKIFKESGDQIAGFLFEPI   69 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----------d~~~le~~i~~~~~~~~~v~v~~~   69 (306)
                      |++||+|.++|||.+.++++++++ ..+...+.|..+.+..+|++           +++.|++.++++++++++|++||+
T Consensus       136 r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi  215 (429)
T PRK06173        136 RTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPV  215 (429)
T ss_pred             CcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcch
Confidence            578999999999999999998874 33556666666666555553           366788888876678999999997


Q ss_pred             -cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893           70 -QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM  148 (306)
Q Consensus        70 -~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~  148 (306)
                       ++.+|.++++++|+++|+++|++||+++|+||+|+|||+.|..|.++++++.||+++++|+++||+.+++.++.+++++
T Consensus       216 ~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i~  295 (429)
T PRK06173        216 VQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIA  295 (429)
T ss_pred             hhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCCEEEeehhhhCCccccceEEecHHHH
Confidence             9999999999999999999999999999999999999999999888899999999999999999965899999999999


Q ss_pred             hhcCC-----CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893          149 LCIQP-----GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD  223 (306)
Q Consensus       149 ~~~~~-----~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~  223 (306)
                      +.+.+     ..++.||.+++++++++.++++.+.++++.++++++.+++++.|+++ ..++ .+..+++.|+++.+.+.
T Consensus       296 ~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~-~~~~-~v~~vRg~Gl~~~iel~  373 (429)
T PRK06173        296 QTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRIEAQLKQELAPA-AEFD-SVAEVRVLGAIGVVEMK  373 (429)
T ss_pred             HHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh-hcCC-CeeeeeccceEEEEEeC
Confidence            87753     24677889999999999999999998889999999999999999976 3343 56688999999999997


Q ss_pred             cCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          224 KTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       224 ~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +   ......+.+.|+++|+++.+.+ +.+|+.|++..+++++++++++|++++. ++.
T Consensus       374 ~---~~~~~~i~~~l~e~Gi~v~~~g-~~l~~~Ppl~it~~ei~~~~~~l~~~l~-~~~  427 (429)
T PRK06173        374 E---PVNMATLQPRFVEHGIWVRPFG-KLVYIMPPFIISPDELSQLTSGLLRVLK-QEY  427 (429)
T ss_pred             C---cccHHHHHHHHHHCCeEEEecC-CEEEEeCCccCCHHHHHHHHHHHHHHHH-HHh
Confidence            4   2345688999999999998875 6999999999999999999999999998 643

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=6e-41  Score=308.14  Aligned_cols=277  Identities=32%  Similarity=0.630  Sum_probs=238.6

Q ss_pred             cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCcccccCCC-------------H--------HHHHHHHHh---
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFGD-------------I--------TALEKIFKE---   56 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d-------------~--------~~le~~i~~---   56 (306)
                      |++||.|.++|||++.+++++++. ......+.|..+++..+|+++             .        +.+|+.+..   
T Consensus       139 r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~  218 (457)
T PRK05639        139 RPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVV  218 (457)
T ss_pred             CCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhc
Confidence            578999999999999999988874 345566777777777777763             2        235555432   


Q ss_pred             cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcc
Q 021893           57 SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVI  136 (306)
Q Consensus        57 ~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~  136 (306)
                      .++++++|++||++..+|.++++++|+++|+++|++||+++|+||+++|||+.|..|.++++++.||+++++|+++||+ 
T Consensus       219 ~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~-  297 (457)
T PRK05639        219 PPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLIIFGKGVASGM-  297 (457)
T ss_pred             CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCEEEechhhcCCC-
Confidence            2468999999999999999999999999999999999999999999999999999888899999999999999999998 


Q ss_pred             cceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893          137 PVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL  216 (306)
Q Consensus       137 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~  216 (306)
                      ++|++++++++++ +....+..|+.+|+++++++.++++.+.++++.++.++++++++++|+++...+ +.+.++++.|+
T Consensus       298 pi~av~~~~~i~~-~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~-~~~~~VrG~Gl  375 (457)
T PRK05639        298 GLSGVIGRKELMD-LTSGSALLTPAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESF-EVIGDVRGKGL  375 (457)
T ss_pred             cceeEEehHHHHh-hcCCCcccCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhC-CCEEeecccee
Confidence            9999999999998 333346678899999999999999999998999999999999999999988777 47889999999


Q ss_pred             EEEEEEecCC---ChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          217 FNAVEFDKTA---LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       217 ~~~i~~~~~~---~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      ++.+++..+.   .......+.+.|+++|+++.+.+  .+.+|+.|++.+|++|+++++++|+++++ ++.
T Consensus       376 ~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~-~~~  445 (457)
T PRK05639        376 MIGVEIVKENGKPDPELTGKICWRAFELGLILPSYGMFGNVIRITPPLVITKEIAEKGLEIMERAIK-DAL  445 (457)
T ss_pred             EEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHH-HHH
Confidence            9999885421   11235678999999999998754  57999999999999999999999999998 764

>PRK06541 hypothetical protein; Provisional

Probab=100.00  E-value=9.7e-41  Score=307.28  Aligned_cols=277  Identities=29%  Similarity=0.518  Sum_probs=238.9

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC------------------HHHHHHHHHh-cCCcEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKE-SGDQIA   62 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~i~~-~~~~~~   62 (306)
                      |++||.|.++|||.+.+++++++.+.....|.|..+++..+|+++                  ++.+++.++. ++++++
T Consensus       144 r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~A  223 (460)
T PRK06541        144 KHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVA  223 (460)
T ss_pred             ccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence            579999999999999999999987767777778878876665443                  3678888875 346799


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893           63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL  142 (306)
Q Consensus        63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~  142 (306)
                      +|++||+++++|.+.++++||++|+++|++||+++|+||+|+|||+.|..+.++++++.||++++||++++|+.|+|+++
T Consensus       224 avi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt~gK~l~~G~~pigav~  303 (460)
T PRK06541        224 AVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMI  303 (460)
T ss_pred             EEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEEecccccCCccceeEEE
Confidence            99999999999999999999999999999999999999999999999999888889999999999999999977999999


Q ss_pred             eCHHHHhhcCCC----CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893          143 ADKEVMLCIQPG----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN  218 (306)
Q Consensus       143 ~~~~~~~~~~~~----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~  218 (306)
                      +++++++.+...    .+..|+.+|+++++++.++++.+.++++.+++++++++++++|+++.. + +.+..+++.|+++
T Consensus       304 ~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~-~-~~v~~vrg~Gl~~  381 (460)
T PRK06541        304 ASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLD-L-PIVGDVRGDGYFY  381 (460)
T ss_pred             EcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-C-CCeEEEEecceEE
Confidence            999999877532    356789999999999999999998888999999999999999999865 5 3677899999999


Q ss_pred             EEEEecCCC------hh-----hHHHHHHHHHHCCceeccC--CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          219 AVEFDKTAL------PV-----SAYDICLKMKERGILAKPT--HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       219 ~i~~~~~~~------~~-----~~~~~~~~l~~~Gi~~~~~--~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .+++..+..      ..     ....+.+.|+++||++.+.  +.+.+|++|++.+|++||++++++|++++. ++
T Consensus       382 ~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~-~~  456 (460)
T PRK06541        382 GIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLT-EA  456 (460)
T ss_pred             EEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-HH
Confidence            999854210      00     1135778999999999874  457899999999999999999999999998 54

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=100.00  E-value=6.5e-41  Score=306.34  Aligned_cols=275  Identities=35%  Similarity=0.634  Sum_probs=240.9

Q ss_pred             cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCcccccCC----------CHHHHHHHHHh--cCCcEEEEEEcc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFG----------DITALEKIFKE--SGDQIAGFLFEP   68 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----------d~~~le~~i~~--~~~~~~~v~v~~   68 (306)
                      +.+||+|+|+|||++.+++++++. ......+.|..+++..+|++          +++.+++.+++  .++++++|++||
T Consensus       127 r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EP  206 (421)
T PRK09792        127 RPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEP  206 (421)
T ss_pred             CCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEcc
Confidence            578999999999999999998874 34566677776777667764          35788888874  236799999999


Q ss_pred             ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893           69 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM  148 (306)
Q Consensus        69 ~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~  148 (306)
                      +++++|...++++++++|+++|++||+++|+||+++||++.|..++++.++..||+.++||++++|+ |+|+++++++++
T Consensus       207 vq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi~t~gK~l~~G~-pigav~~~~~i~  285 (421)
T PRK09792        207 VQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAGGM-PLSGVVGNANIM  285 (421)
T ss_pred             ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcEEEeehhhcCCC-ceEEEEEcHHHH
Confidence            9999998888999999999999999999999999999999998888888889999999999999998 999999999999


Q ss_pred             hhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC-
Q 021893          149 LCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-  227 (306)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~-  227 (306)
                      +.+....+..++.+|+++++++.++++.+.++++.++++++.+++++.|+++...+| .+..+++.|+++++++.+... 
T Consensus       286 ~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~p-~v~~vrG~Gl~~~ie~~~~~~~  364 (421)
T PRK09792        286 DAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVP-AIAAVRGLGSMIAAEFNDPQTG  364 (421)
T ss_pred             hccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhCC-CcceecccceEEEEEecCCccC
Confidence            988877788999999999999999999998888999999999999999999987775 677899999999999975311 


Q ss_pred             ---hhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          228 ---PVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       228 ---~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                         ......+.+.++++|+++.+.+  ++.||+.|++.++++++++++++|.+++.
T Consensus       365 ~~~~~~~~~l~~~~~~~Gv~i~~~g~~~~~irl~P~l~i~~~ei~~~~~~l~~~l~  420 (421)
T PRK09792        365 EPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDAQFDAAMKILQDALS  420 (421)
T ss_pred             CcchHHHHHHHHHHHHCCcEEeecCCCCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence               1245678999999999997543  58999999999999999999999999875

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=100.00  E-value=1.1e-40  Score=305.19  Aligned_cols=275  Identities=34%  Similarity=0.581  Sum_probs=238.1

Q ss_pred             cceEEEEecCCCCcccchhcccCCc-cccccCCCCCCCcccccCC----------------CHHHHHHHHH--hcCCcEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFG----------------DITALEKIFK--ESGDQIA   62 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------------d~~~le~~i~--~~~~~~~   62 (306)
                      |.+||.|+++|||.+.++++++++. .....+.|..+++..+|++                +++.+++.+.  ..+++++
T Consensus       120 r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iA  199 (420)
T TIGR00700       120 RPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVA  199 (420)
T ss_pred             CCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEE
Confidence            5789999999999999999988752 3556677777776655553                2567777774  3457899


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893           63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL  142 (306)
Q Consensus        63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~  142 (306)
                      +|++||++..+|.+.++++++++|+++|++||+++|+||+|+||++.|..++++.+++.||++++||++++|+ |+|+++
T Consensus       200 avi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~~lsK~l~~G~-pig~v~  278 (420)
T TIGR00700       200 ALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLITTAKSLADGL-PLSGVT  278 (420)
T ss_pred             EEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEEEeeccccCCc-ceEEEE
Confidence            9999999999999999999999999999999999999999999999998887888899999999999999999 999999


Q ss_pred             eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE
Q 021893          143 ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF  222 (306)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~  222 (306)
                      +++++++.+....+..++.+|+++++++.++++.+.++++.+++++.++++++.|+++...++ .+..+++.|+++++.+
T Consensus       279 ~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~-~~~~vrg~G~~~~i~~  357 (420)
T TIGR00700       279 GRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDP-RIGDVRGLGAMIAVEL  357 (420)
T ss_pred             ecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCC-CEEEeeccceEEEEEE
Confidence            999999998877788999999999999999999998888999999999999999999877664 6778899999999988


Q ss_pred             ecCC----ChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          223 DKTA----LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       223 ~~~~----~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .+..    .......+.+.|+++||.+.|++  .+++|++|+...+++++++++++|.++++
T Consensus       358 ~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~~~~~l~~~~~~l~~~l~  419 (420)
T TIGR00700       358 VDPGTTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDELLSEGLDILCAILA  419 (420)
T ss_pred             ecCCCCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence            5321    12235677888889999999864  57999999998999999999999998875

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=100.00  E-value=5.6e-41  Score=304.11  Aligned_cols=268  Identities=32%  Similarity=0.593  Sum_probs=235.9

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +++||+|+++|||.+.+++++++.......+.|..+++...+++|++.+++.+.   +++++|++||+++++|.++++++
T Consensus       124 r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~aavi~Epv~~~gG~~~~~~~  200 (395)
T PRK03715        124 AYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLIT---DKTVAVMLEPVQGEGGVIPATRE  200 (395)
T ss_pred             CcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcC---CCceEEEEeCCcCCCCCccCCHH
Confidence            368999999999999999999987666667777777777788999999999997   57999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      |+++|+++|++||+++|+||+|+|||+.|..+.++++++.||++++||++++|+ ++|.++++++++ .+.+..+.+||.
T Consensus       201 ~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~gK~lg~G~-p~~av~~~~~i~-~~~~~~~~~T~~  278 (395)
T PRK03715        201 FMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLGKGIGGGV-PLAALLAKAEVA-VFEAGDQGGTYN  278 (395)
T ss_pred             HHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeeehhhhhCCc-ceEEEEEccccc-cccCCCcCCCCC
Confidence            999999999999999999999999999999988899999999999999999998 999999999986 344445778999


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      +++++++++.++++.+.++++.++++++.++++++|+++...++  +..+++.|+++.+.+.+    .....+.+.+.+.
T Consensus       279 g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~--i~~vrG~Glm~~i~l~~----~~~~~~~~~~~~~  352 (395)
T PRK03715        279 GNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSEERG--LEGERGEGLLRALLLGK----DIGPQIVEKARDM  352 (395)
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcCC--cCeEEcceeEEEEEecC----chHHHHHHHHHhc
Confidence            99999999999999999888999999999999999999876652  45688999999999874    1233455555555


Q ss_pred             ---CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          242 ---GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       242 ---Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                         |+++.+...+.+|++|++.+|+++|+.++++|+++++ ++
T Consensus       353 ~~~Gi~~~~~~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~-~~  394 (395)
T PRK03715        353 QPDGLLLNAPRPNLLRFMPALNVTTEEIDQMIAMLRSVLD-KL  394 (395)
T ss_pred             cCCCEEEeecCCCEEEEeCCcccCHHHHHHHHHHHHHHHH-hh
Confidence               9999876678999999999999999999999999988 54

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=1.1e-40  Score=306.45  Aligned_cols=278  Identities=35%  Similarity=0.648  Sum_probs=240.4

Q ss_pred             cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCcccccCC-----------------CHHHHHHHHHh--cCCcE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFG-----------------DITALEKIFKE--SGDQI   61 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----------------d~~~le~~i~~--~~~~~   61 (306)
                      +++||.|+++|||++.++++++++ ..+...+.|..+++..+|++                 +++.+++.+++  .++++
T Consensus       129 r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  208 (433)
T PRK08117        129 RPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEV  208 (433)
T ss_pred             CCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcE
Confidence            578999999999999999988774 44555566666676666554                 56778888874  34679


Q ss_pred             EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceee
Q 021893           62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAV  141 (306)
Q Consensus        62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~  141 (306)
                      ++|++||+++++|.+.+++++|++|+++|++||++||+||+|+||++.|..+..+.+++.||+.++||++++|+ |+|++
T Consensus       209 aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK~lg~G~-pigav  287 (433)
T PRK08117        209 AAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAKGIASGL-PLSAV  287 (433)
T ss_pred             EEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCCEeehhhhccCCC-cceeE
Confidence            99999999999999999999999999999999999999999999999999877778899999999999999998 99999


Q ss_pred             EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893          142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE  221 (306)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~  221 (306)
                      ++++++++.+....+..++++|+++++++.++++.+.++++.+++++++++++++|+++...++ .+..+++.|.+++++
T Consensus       288 ~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~~~~vrg~Gl~~gi~  366 (433)
T PRK08117        288 VASKELMEQWPLGSHGTTFGGNPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHP-VIGDVRGIGLMIGIE  366 (433)
T ss_pred             EEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCC-ceeeeecCCcEEEEE
Confidence            9999999988777788899999999999999999998888999999999999999999877764 667899999999999


Q ss_pred             EecCC---ChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          222 FDKTA---LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       222 ~~~~~---~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +.+..   .......+.+.|+++||++.+.+  .+++|++|++.+|+++|++++++|.++++ ++.
T Consensus       367 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~-~~~  431 (433)
T PRK08117        367 IVDPDGEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPPLTVTKEEIDEGLDILDEALT-EYE  431 (433)
T ss_pred             EecCCCCcchHHHHHHHHHHHHCCCEEeecCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHH-HHh
Confidence            86431   12235678899999999987643  47999999999999999999999999998 764

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=100.00  E-value=8.8e-41  Score=304.36  Aligned_cols=264  Identities=53%  Similarity=0.933  Sum_probs=235.3

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+||++.++|||.+..++++++.+.+...+.|..+++..+|++|++.+++.++   +++++|++||+++++|.+.++++
T Consensus       131 r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~---~~~~~viiep~~~~~G~~~~~~~  207 (396)
T PRK04073        131 KAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGDLEALKAAIT---PNTAAFLVEPIQGEAGINIPPEG  207 (396)
T ss_pred             CCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCCHHHHHHhcc---cCeEEEEEcCccCCCCCccCCHH
Confidence            468999999999999999999987666777888888888999999999999986   57999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccC-CcccceeeEeCHHHHhhcCCCCccCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGG-GVIPVSAVLADKEVMLCIQPGEHGSTF  160 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~-G~~~~g~~~~~~~~~~~~~~~~~~~~~  160 (306)
                      +|++|.++|++||+++|+||+|+|+++.|..+..+..++.||++++||++++ |+ |+|++++++++++.+....+..++
T Consensus       208 ~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~sK~lg~gg~-~ig~~~~~~~i~~~~~~~~~~~t~  286 (396)
T PRK04073        208 FLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYILGKALGGGVF-PISCVAANRDILGVFTPGSHGSTF  286 (396)
T ss_pred             HHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEecccccCCCC-cceEEEEcHHHHhhhcCCCCCCCC
Confidence            9999999999999999999999999999887766777889999999999995 47 999999999999998776778889


Q ss_pred             CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH
Q 021893          161 GGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE  240 (306)
Q Consensus       161 ~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~  240 (306)
                      ++++++++++.++++.+.++++.++.+++++++.+.|+++.  . +.+..+++.|.++++.++.     ...++++.|++
T Consensus       287 ~~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l~--~-~~i~~~~~~g~~~~~~~~~-----~~~~~~~~l~~  358 (396)
T PRK04073        287 GGNPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEID--N-PMIKEVRGRGLFIGVELNE-----PARPYCEALKE  358 (396)
T ss_pred             CCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhc--C-CcccceecceEEEEEEecc-----hHHHHHHHHHH
Confidence            99999999999999998777888999999999999999863  2 1445678889998888753     35689999999


Q ss_pred             CCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       241 ~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      +||++.+.++++||++|++.++++++++++++|++++
T Consensus       359 ~Gv~~~~~~~~~iRi~p~l~~t~e~i~~~~~~l~~~l  395 (396)
T PRK04073        359 EGLLCKETHETVIRFAPPLVITKEELDWAFEKIKAVL  395 (396)
T ss_pred             CCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence            9999998777899999999999999999999999876

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=100.00  E-value=1.6e-40  Score=304.84  Aligned_cols=276  Identities=32%  Similarity=0.551  Sum_probs=238.6

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC------------------HHHHHHHHHhcC-CcEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKESG-DQIA   62 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~i~~~~-~~~~   62 (306)
                      +++||+|+++|||.+.+++++++....+..|.|..+++..+|++.                  .+.+++.++.++ ++++
T Consensus       141 r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iA  220 (445)
T PRK09221        141 RTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIA  220 (445)
T ss_pred             CcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEE
Confidence            468999999999999999999987777777777777766555542                  368888887653 6799


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893           63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL  142 (306)
Q Consensus        63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~  142 (306)
                      +|++||+++++|.+.++++||++|+++|++||+++|+||+++|||+.|..+.++++++.||++++||++++|+.|+|.++
T Consensus       221 avi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~~gK~l~gG~~Pi~av~  300 (445)
T PRK09221        221 AVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIITFAKGLTNGAIPMGAVI  300 (445)
T ss_pred             EEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEEeccccccCcccceeeE
Confidence            99999999999999999999999999999999999999999999999999888999999999999999998844999999


Q ss_pred             eCHHHHhhcCC-------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893          143 ADKEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG  215 (306)
Q Consensus       143 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g  215 (306)
                      +++++++.+..       ..+..||.+|+++++++.++++.+.++++.++++++.+++++.|+++. .++ .+..+++.|
T Consensus       301 ~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~-~~~-~v~~vrg~G  378 (445)
T PRK09221        301 ASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSLK-GLP-HVIDIRNIG  378 (445)
T ss_pred             EcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc-cCC-CEEEEecCc
Confidence            99999987753       136678999999999999999999888899999999999999999874 343 677899999


Q ss_pred             eEEEEEEecCC--ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          216 LFNAVEFDKTA--LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       216 ~~~~i~~~~~~--~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +++.+++....  .......+.+.|+++|+++.+. .+.+||+|++.+|+++|++++++|++++. ++
T Consensus       379 l~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~-~~~lr~~Ppl~~t~~eid~~~~~l~~~l~-~~  444 (445)
T PRK09221        379 LVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYT-GDTIALSPPLIIEKAQIDELVDALGDALR-AV  444 (445)
T ss_pred             eEEEEEEecccccccchHHHHHHHHHHCCeEEeec-CCEEEEECCccCCHHHHHHHHHHHHHHHH-hh
Confidence            99998886421  1123457889999999999876 46899999999999999999999999997 54

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=2e-40  Score=305.12  Aligned_cols=275  Identities=30%  Similarity=0.555  Sum_probs=237.2

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCccccc--------CCC--------HHHHHHHHHhcCCcEEEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD--------FGD--------ITALEKIFKESGDQIAGFL   65 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d--------~~~le~~i~~~~~~~~~v~   65 (306)
                      |.+||+|+++|||.+.+++++++...+...+.|..+++..+|        +++        ++.+++.++++ +++++|+
T Consensus       156 r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~-~~vAavI  234 (459)
T PRK06082        156 NFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE-GGIGAFI  234 (459)
T ss_pred             CCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence            579999999999999999999987767777777777765554        333        35588888754 5799999


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCH
Q 021893           66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADK  145 (306)
Q Consensus        66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~  145 (306)
                      +||++++ |.++++++||++|+++|++||++||+||+++||||.|..|.++++++.||+++++|+++||++|+|.+++++
T Consensus       235 vEPv~g~-g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~~gKgl~gG~~P~~av~~~~  313 (459)
T PRK06082        235 AEAVRNT-DVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILCIGKGLGGGLVPIAAMITKD  313 (459)
T ss_pred             ECCccCC-CCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEEEecccccCCCCcceEEEEcH
Confidence            9999987 467889999999999999999999999999999999999988999999999999999998855999999999


Q ss_pred             HHHhhcCCC-CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec
Q 021893          146 EVMLCIQPG-EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK  224 (306)
Q Consensus       146 ~~~~~~~~~-~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~  224 (306)
                      +++..+... .+ .||.+|+++++++.++++.+.++++.++++++++++++.|+++...++ .+..+++.|+++.+++..
T Consensus       314 ~i~~~~~~~~~~-~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrG~Gl~~~ve~~~  391 (459)
T PRK06082        314 KYNTAAQISLGH-YTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYP-LIGDVRGIGLLWGVELVT  391 (459)
T ss_pred             HHHhhccCCCCC-CCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCC-CeeeeeeccceeEEEEcc
Confidence            987654322 34 789999999999999999998888999999999999999999987774 788999999999999964


Q ss_pred             CCC-----hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          225 TAL-----PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       225 ~~~-----~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +..     ......+...++++|+++.+.+.+.+|++|++.+|+++|+++++++++++. ++
T Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~i~~~Ppl~it~~eid~~~~~l~~~l~-~~  452 (459)
T PRK06082        392 DRHTKERAYDEAEAVLYRCLNNGLSFKVSQGNVIQLSPPLIITREELTQALAILEEAIA-KI  452 (459)
T ss_pred             CccccCccHHHHHHHHHHHHhCCCEEEecCCCEEEEeCCCccCHHHHHHHHHHHHHHHH-HH
Confidence            210     112456788899999999887678999999999999999999999999998 76

>PRK07480 putative aminotransferase; Validated

Probab=100.00  E-value=1.7e-40  Score=305.28  Aligned_cols=278  Identities=31%  Similarity=0.501  Sum_probs=234.7

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-----------------HHHHHHHHHh-cCCcEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKE-SGDQIAG   63 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~-~~~~~~~   63 (306)
                      |++||.|.++|||.+.+++++++.......+.+..+++..+++++                 ++.|++.+.+ .++++++
T Consensus       143 r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAA  222 (456)
T PRK07480        143 KKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAA  222 (456)
T ss_pred             CcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence            468999999999999999999886555555555455555444331                 3667665543 3468999


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA  143 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~  143 (306)
                      |++||+++.+|.++++++||++|+++|++||++||+||+++||||.|..+.++++++.||+++++|+++||+.|+|.+++
T Consensus       223 vi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~  302 (456)
T PRK07480        223 FIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGV  302 (456)
T ss_pred             EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCCCeeeeehhhccCCccceEEEE
Confidence            99999999999999999999999999999999999999999999999999899999999999999999999669999999


Q ss_pred             CHHHHhhcC--C--CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHH-HHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893          144 DKEVMLCIQ--P--GEHGSTFGGNPLASAVAIASLDVIRDEKLAERS-AHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN  218 (306)
Q Consensus       144 ~~~~~~~~~--~--~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~-~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~  218 (306)
                      ++++++.+.  .  ..+++||++|+++++++.++|+.+.++++.+++ +++++++++.|+++ ..+ +.+..+++.|+++
T Consensus       303 ~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l-~~~-~~i~~vrG~Glm~  380 (456)
T PRK07480        303 GDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLREL-ADH-PLVGEVRGVGLVG  380 (456)
T ss_pred             cHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-hcC-CCeeeEEeecceE
Confidence            999998873  2  257889999999999999999999998899999 69999999999996 455 4788999999999


Q ss_pred             EEEEecCCC------h--hhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          219 AVEFDKTAL------P--VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       219 ~i~~~~~~~------~--~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      .+++..+..      .  .....+.+.|+++|+++.+. .+.+|++|++.+|++||++++++|++++. ++.+
T Consensus       381 gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-~~~l~~~Ppl~it~~eid~~~~~l~~al~-~~~~  451 (456)
T PRK07480        381 AIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV-GDRMIISPPLVITHAEIDELVEKARKALD-ATAA  451 (456)
T ss_pred             EEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec-CCEEEEECCCCCCHHHHHHHHHHHHHHHH-HHHH
Confidence            999964210      0  01246778899999999875 46899999999999999999999999998 7643

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=100.00  E-value=3.1e-40  Score=301.45  Aligned_cols=273  Identities=33%  Similarity=0.573  Sum_probs=239.6

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+||+++++|||.+..++++++.......+.|...++..++++|++.+++.+.   +++++|++||+++++|.+.++++
T Consensus       129 ~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~aaiiiep~~~~gg~~~~~~~  205 (403)
T PRK05093        129 KTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLAAVKAVID---DHTCAVVVEPIQGEGGVIPATPE  205 (403)
T ss_pred             CCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCHHHHHHHhc---CCeEEEEEecccCCCCCccCCHH
Confidence            468999999999999998888876655566666666789999999999999996   57999999999999998888999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      ++++|+++|++||+++|+||+|+|+++.|..++....++.||+.++||++++|+ |+||+++++++++.+....+..+++
T Consensus       206 ~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~-rig~vv~~~~i~~~l~~~~~~~t~~  284 (403)
T PRK05093        206 FLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILTSAKALGGGF-PIGAMLTTAEIASHFKVGTHGSTYG  284 (403)
T ss_pred             HHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEEEecccccCCc-ceEEEEEcHHHHhhcCCCCCCCCCC
Confidence            999999999999999999999999999988766667788999999999999999 9999999999999988766777888


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      .+++.++++.++++.+..+++.++++++++++++.|+++...++ ....+++.|.++++.+++.. .....+++..|+++
T Consensus       285 ~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~G~~~~~~l~~~~-~~~~~~~~~~l~~~  362 (403)
T PRK05093        285 GNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQKYG-VFSEIRGMGLLIGAELKPQY-KGRARDFLNAAAEE  362 (403)
T ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCC-CeEeEeeCceEEEEEecCcc-hhHHHHHHHHHHHC
Confidence            99999999999999987778899999999999999999876552 55678888999999886411 12467899999999


Q ss_pred             CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ||.+.+.+.+++|++|++.+++++|++++++|++++. .+
T Consensus       363 Gv~v~~~g~~~lRl~~~~~~~~~~i~~~~~~l~~~l~-~~  401 (403)
T PRK05093        363 GVMVLVAGPDVLRFAPSLVIEEADIDEGLARFEKAVA-KV  401 (403)
T ss_pred             CeEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH-Hh
Confidence            9999987778999999999999999999999999987 53

>PRK06917 hypothetical protein; Provisional

Probab=100.00  E-value=2.6e-40  Score=303.66  Aligned_cols=280  Identities=35%  Similarity=0.567  Sum_probs=239.1

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC-----------------CCHHHHHHHHHhcC-CcEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-----------------GDITALEKIFKESG-DQIAG   63 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~d~~~le~~i~~~~-~~~~~   63 (306)
                      |++||.|+|+|||++.+++++++.......|.|..+++..++.                 ++++.+|+.+++++ +++++
T Consensus       123 r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAA  202 (447)
T PRK06917        123 KHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGAEHIAA  202 (447)
T ss_pred             CCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEE
Confidence            5789999999999999999988876566666555544332221                 23567888888654 47999


Q ss_pred             EEEccccCC-CCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893           64 FLFEPIQGE-AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL  142 (306)
Q Consensus        64 v~v~~~~~~-~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~  142 (306)
                      |++||++.. +|.++++++|+++|+++|++||+++|+||+++||||.|..+.++++++.||+++++|++++|+.|+|.++
T Consensus       203 vi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~~gK~l~~G~~Pi~a~~  282 (447)
T PRK06917        203 FIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATV  282 (447)
T ss_pred             EEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEEeeehhccCCcceEEEE
Confidence            999999985 6788999999999999999999999999999999999999988999999999999999999966999999


Q ss_pred             eCHHHHhhcCCC----CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893          143 ADKEVMLCIQPG----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN  218 (306)
Q Consensus       143 ~~~~~~~~~~~~----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~  218 (306)
                      +++++++.+...    .+++||.+|+++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+++.|+++
T Consensus       283 ~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrG~Gl~~  361 (447)
T PRK06917        283 VSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQST-IIGDVRGKGLLI  361 (447)
T ss_pred             EcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhcCC-CEEEEeecceEE
Confidence            999999887542    356799999999999999999999888999999999999999999988774 788999999999


Q ss_pred             EEEEecCCC--------hhhHHHHHHHHHHCCceeccCC-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          219 AVEFDKTAL--------PVSAYDICLKMKERGILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       219 ~i~~~~~~~--------~~~~~~~~~~l~~~Gi~~~~~~-------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      .+++..+..        ......+.+.|+++|+++.+.+       .+.+|++|++.+|++||+.++++|+++++ ++.+
T Consensus       362 ~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~-~~~~  440 (447)
T PRK06917        362 GVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVE-EMMQ  440 (447)
T ss_pred             EEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHH-HHHH
Confidence            999853210        1225578899999999998752       56999999999999999999999999998 7633

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=2.2e-40  Score=303.77  Aligned_cols=276  Identities=32%  Similarity=0.540  Sum_probs=237.3

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccc--cCCC-----HHHHHHHHHhcCCcEEEEEEcc-ccCCC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKV--DFGD-----ITALEKIFKESGDQIAGFLFEP-IQGEA   73 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d-----~~~le~~i~~~~~~~~~v~v~~-~~~~~   73 (306)
                      |+|||+|+++|||.+.++++++++......+.|..+++..+  |++|     ++.+++.++++++++++|++|| +++.+
T Consensus       134 r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~g  213 (423)
T PRK05964        134 RSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAG  213 (423)
T ss_pred             CcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEecccccCC
Confidence            57999999999999999999998766666666666665444  4456     8899999987767899999999 69999


Q ss_pred             CcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC
Q 021893           74 GVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP  153 (306)
Q Consensus        74 G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~  153 (306)
                      |.+++++++|++|+++|++||++||+||+|+|+|+.|..+.++.+++.||++++||+++||+.|+|++++++++++.+..
T Consensus       214 G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~  293 (423)
T PRK05964        214 GMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYS  293 (423)
T ss_pred             CcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCCeeeeehhhhcCcccceEEEEcHHHHHhhhc
Confidence            99999999999999999999999999999999999998887788899999999999999883399999999999988753


Q ss_pred             C------CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC
Q 021893          154 G------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL  227 (306)
Q Consensus       154 ~------~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~  227 (306)
                      .      .+++||.+|+++++++.++++.+.++++.++++++.+++++.|+++.. ++ .+..+++.|.++.+.+.+...
T Consensus       294 ~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~-~~-~i~~vrg~Gl~~~i~l~~~~~  371 (423)
T PRK05964        294 DDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPFRD-LP-GVADVRVLGAIGAVELDRPVL  371 (423)
T ss_pred             CCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhcc-CC-CeEEeecccEEEEEEeccCcc
Confidence            2      366788899999999999999998888999999999999999998743 43 566788999999998864211


Q ss_pred             hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          228 PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       228 ~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ......+.+.|.++||++.+.+ +.+|++|++.+|++||+.++++|+++++ ++
T Consensus       372 ~~~~~~l~~~l~~~Gv~v~~~~-~~lR~~p~l~~t~edId~~v~~l~~al~-~~  423 (423)
T PRK05964        372 ERDGPALRAFALERGVLLRPLG-NTIYLMPPYIITAEELDRITDAIVEVAD-EL  423 (423)
T ss_pred             hhHHHHHHHHHHHCCeEEEecC-CEEEEeCCcccCHHHHHHHHHHHHHHHh-hC
Confidence            1135688999999999998864 6899999999999999999999999998 64

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=2.2e-40  Score=301.98  Aligned_cols=268  Identities=30%  Similarity=0.486  Sum_probs=230.9

Q ss_pred             cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCcccccCC--------C----HHHHHHHHHhcCCcEEEEEEcc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFG--------D----ITALEKIFKESGDQIAGFLFEP   68 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--------d----~~~le~~i~~~~~~~~~v~v~~   68 (306)
                      |+|||+|+++|||.+.++++++++ ......|.|..+++.++|++        |    .+.+++.+.   +++++|++||
T Consensus       132 r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~iAAvi~EP  208 (422)
T PRK05630        132 RTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLID---ETVAAIIIEP  208 (422)
T ss_pred             CcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHh---hceEEEEEec
Confidence            578999999999999999999884 33556666666665555443        1    234455554   5799999999


Q ss_pred             c-cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHH
Q 021893           69 I-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV  147 (306)
Q Consensus        69 ~-~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~  147 (306)
                      + ++.+|.++++++++++|+++|++||+++|+||+++|||+.|..++++++++.||+++++|+++||+.++|++++++++
T Consensus       209 i~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i  288 (422)
T PRK05630        209 IVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKV  288 (422)
T ss_pred             hhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCeeeeechhhcCccccceeeccHHH
Confidence            6 999999999999999999999999999999999999999999998899999999999999999996589999999999


Q ss_pred             HhhcCC------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893          148 MLCIQP------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE  221 (306)
Q Consensus       148 ~~~~~~------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~  221 (306)
                      ++.+..      ..++.||.+|+++++++.++++.+.++++.++++++.+++++.|+.+.. ++ .+.++++.|+++.++
T Consensus       289 ~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l~~-~~-~v~~vRg~Gl~~~ie  366 (422)
T PRK05630        289 AQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRIEAELIAGLSPLAH-LP-GVADVRVLGAIGVVE  366 (422)
T ss_pred             HHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHhhc-CC-CeeeeeccccEEEEE
Confidence            987753      1467899999999999999999999888999999999999999997643 43 678899999999999


Q ss_pred             EecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          222 FDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       222 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +..   ......+.+.|+++|+++.+.+ +.+|+.|++.+|++++++++++|++++.
T Consensus       367 ~~~---~~~~~~~~~~~~~~Gl~~~~~g-~~l~~~PpL~it~~~i~~~~~~l~~al~  419 (422)
T PRK05630        367 MEQ---PVDMEEATQAAVDHGVWLRPFG-RLVYVMPPYITTSEQIAQICAALAAAVK  419 (422)
T ss_pred             ECC---cccHHHHHHHHHHCCeEEEecC-CEEEEECCccCCHHHHHHHHHHHHHHHh
Confidence            964   2235678899999999998874 7999999999999999999999999987

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=1e-39  Score=299.42  Aligned_cols=278  Identities=31%  Similarity=0.568  Sum_probs=239.2

Q ss_pred             cceEEEEecCCCCcccchhcccCCc-cccccCCCCCCCcccccCCC-----------------HHHHHHHHHh--cCCcE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKE--SGDQI   61 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~--~~~~~   61 (306)
                      |++|+.|.++|||.+.+++++++.. ..+..+.| .+++.++|+++                 ++.+++.+++  .++++
T Consensus       127 r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i  205 (443)
T PRK08360        127 RRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGE-LSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGV  205 (443)
T ss_pred             CCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCC-CCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCe
Confidence            5799999999999999999888742 34455555 45566555543                 3556677764  24689


Q ss_pred             EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceee
Q 021893           62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAV  141 (306)
Q Consensus        62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~  141 (306)
                      ++|++||+++++|.+.++++++++|.++|++||+++|+||+|+||++.|..+++..+++.||++++||++++|+ |+|++
T Consensus       206 AAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitlsK~l~~G~-pigav  284 (443)
T PRK08360        206 AALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITLGKPLGGGL-PISAT  284 (443)
T ss_pred             EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEEEecccccCCc-eeEEE
Confidence            99999999999999998999999999999999999999999999999998777777899999999999999998 99999


Q ss_pred             EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893          142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE  221 (306)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~  221 (306)
                      ++++++++.+....+..++.+++++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+++.|+++.++
T Consensus       285 ~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~v~~vrg~Gl~~gie  363 (443)
T PRK08360        285 IGRAEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHE-LIGDVRGIGLMIGVD  363 (443)
T ss_pred             EEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeeccceEEEEE
Confidence            9999999998876678899999999999999999998888999999999999999999877774 778999999999999


Q ss_pred             EecCC-----ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          222 FDKTA-----LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       222 ~~~~~-----~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      +.++.     .......+.+.|+++|+++.+...+.+|++|++.+|+++|++++++|+++++ ++.+
T Consensus       364 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lr~~P~l~~t~~~id~~~~~l~~~l~-~~~~  429 (443)
T PRK08360        364 LVKDRETKERAYEEAAKVVWRAWELGLIVTFFSGNVLRIQPPLTIEKEVLDEGLDILEEAIE-DVEE  429 (443)
T ss_pred             EecCCcccCccHHHHHHHHHHHHHCCeEEeecCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence            86421     1123557889999999999876678999999999999999999999999999 8755

>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=2e-40  Score=284.79  Aligned_cols=273  Identities=33%  Similarity=0.565  Sum_probs=241.1

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      +|||.|+|||||+++++++.+++..+.-++.|..|+++...+||+.+|++.++.|.+.+++||+||++..+|.++.++||
T Consensus       149 t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peF  228 (433)
T KOG1401|consen  149 TKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEF  228 (433)
T ss_pred             eeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHH
Confidence            57999999999999999999999999999999999999999999999999999998889999999999999999999999


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCc---cCC
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEH---GST  159 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~---~~~  159 (306)
                      |..|+++|+++|++||.||+++||+|.|..++.+.+++.||+.|++|.++||+ |+|...+++++++.+.+..+   +++
T Consensus       229 l~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~aK~L~gGl-PigA~~v~~kV~~~i~~~~~l~hg~T  307 (433)
T KOG1401|consen  229 LIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVAKPLGGGL-PIGATGVRDKVAEMISPGDHLYHGGT  307 (433)
T ss_pred             HHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCcceeehhhccCCc-eeEEEeehHHHHhhcCCCCccccCcc
Confidence            99999999999999999999999999999999999999999999999999998 99999999999999988755   999


Q ss_pred             CCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH
Q 021893          160 FGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK  239 (306)
Q Consensus       160 ~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~  239 (306)
                      |.+|++++.++..+++++.+.+..+++.+..+.+++.+.+.....+.......++|+++.+.+..     ....+.+...
T Consensus       308 f~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~-----p~~~~~d~~~  382 (433)
T KOG1401|consen  308 FSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEG-----PVYKFADAAR  382 (433)
T ss_pred             cCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEee-----chhhhhhhhh
Confidence            99999999999999999999999999999999999999999887754455558899998887763     3344555555


Q ss_pred             HCCceeccCCC----CEEEEeC--C--CCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          240 ERGILAKPTHD----TIVRLTP--P--LSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       240 ~~Gi~~~~~~~----~~lRi~~--~--~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      ++|.++...+.    ..+|+.|  .  ..+++|.++.+++.+.++++ ++.
T Consensus       383 ~~~ll~~~~~~~~~~~gv~i~P~~~l~~~~~~E~i~~~l~i~~~~l~-~~~  432 (433)
T KOG1401|consen  383 EQGLLILTLGKGLLEEGVRIAPIYLLTVEHTPEVIQRLLTILEKVLS-ALN  432 (433)
T ss_pred             hhhHHHHHHhcccccceEEEeccccccccCcHHHHHHHHHHHHHHHH-Hhc
Confidence            55555554322    2377776  2  23458899999999999988 654

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=2.3e-39  Score=297.13  Aligned_cols=273  Identities=36%  Similarity=0.714  Sum_probs=234.9

Q ss_pred             cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCcccccCCC------------------HHHHHH-HHHh--cCC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFGD------------------ITALEK-IFKE--SGD   59 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d------------------~~~le~-~i~~--~~~   59 (306)
                      |.+||.|.++|||++.+++++++. ......+.|..+++..+++++                  ++.+|+ ++++  .++
T Consensus       141 r~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~  220 (441)
T PRK05769        141 RKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPE  220 (441)
T ss_pred             CCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCC
Confidence            578999999999999999998764 335566777777776666532                  234666 3332  346


Q ss_pred             cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccce
Q 021893           60 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVS  139 (306)
Q Consensus        60 ~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g  139 (306)
                      ++++|++||+++++|.++++++||++|+++|++||+++|+||+|+|||+.|..++++.+++.||++++||++++|+ |+|
T Consensus       221 ~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt~~K~l~~G~-p~g  299 (441)
T PRK05769        221 EVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLAKAIAGGL-PLG  299 (441)
T ss_pred             ceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEEEEcccccCCc-ccE
Confidence            8999999999999999999999999999999999999999999999999999888888899999999999999998 999


Q ss_pred             eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893          140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA  219 (306)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~  219 (306)
                      ++++++++++.+ ...+..+|.+++++++++.++++.+.+ ++.++++++.+++++.|+++...++ .+..+++.|+++.
T Consensus       300 av~~~~~i~~~~-~~~~~~T~~g~p~~~aaa~a~L~~l~~-~~~~~~~~~g~~l~~~L~~l~~~~~-~~~~vrg~G~~~~  376 (441)
T PRK05769        300 AVIGRAELMFLP-PGSHANTFGGNPVAAAAALATLEELEE-GLLENAQKLGEYLRKELKELKEKYE-FIGDVRGLGLMIG  376 (441)
T ss_pred             EEEEehhhhhcC-CCCCCCCCCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeecceEEEE
Confidence            999999988543 446788999999999999999999988 8999999999999999999987774 7789999999999


Q ss_pred             EEEecCC---ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          220 VEFDKTA---LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       220 i~~~~~~---~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +.+....   .......+.+.|+++|+++.+.+.+.+|++|+..+|++||+++++++++++.
T Consensus       377 i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~  438 (441)
T PRK05769        377 VELVKDRKEPDPKLRDKVLYEAFKRGLLLLGAGKSAIRIIPPLIITEEEADIGLEILEEAIK  438 (441)
T ss_pred             EEeccCCccccHHHHHHHHHHHHhCCcEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence            9885421   1123557888999999999887778999999999999999999999999987

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=100.00  E-value=1.5e-39  Score=290.44  Aligned_cols=255  Identities=37%  Similarity=0.696  Sum_probs=228.3

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      |++||++.++|||.+.+++++++++.+...+.|..+++..+|++|++.+++.+.   +++++|++||++..+|.+.++++
T Consensus       107 r~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~---~~~aAvivEpi~g~gG~~~~~~~  183 (364)
T PRK04013        107 RKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAKEAIT---KETAAVIFEPIQGEGGIVPAKEE  183 (364)
T ss_pred             CCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHHHHHHhc---CCcEEEEEcCCcCCCCCcCCCHH
Confidence            478999999999999999999998878888889989999999999999999997   57999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      ||++++++|++||+++|.||+++|+ |.|..+.++++++.||+++++|++++|+ |+|.++.++++    .+..+.+||.
T Consensus       184 yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PDiv~~gK~lggG~-P~~a~~~~~~~----~~~~~~~T~~  257 (364)
T PRK04013        184 FVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIVTMGKGIGNGV-PVSLTLTNFDV----ERGKHGSTFG  257 (364)
T ss_pred             HHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCCEEEecccccCCc-eeEEEEecccc----cCCCcCCCCC
Confidence            9999999999999999999999999 9999998899999999999999999998 99999988775    2345888999


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      +|+++++++.++++.+.++++.++.++.       ++++..   +.+.++++.|+++.+++..     ....+.+.++++
T Consensus       258 gnp~~~aaa~a~l~~i~~~~l~~~~~~~-------l~~l~~---~~v~~vRG~Gl~~gve~~~-----~~~~i~~~~~~~  322 (364)
T PRK04013        258 GNPLACKAVAVTLRILRRERLVEKAGEK-------FIEIKG---ERVVTTRGRGLMIGIVLKK-----PVGKYVEELQNR  322 (364)
T ss_pred             cCHHHHHHHHHHHHHHHhccHHHHHHHH-------HHHhcc---CcceeeeeCcEEEEEEeCC-----cHHHHHHHHHhC
Confidence            9999999999999999998888877654       233311   3678999999999999964     245789999999


Q ss_pred             CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      |+++.+.+.+.+||.|++..+++++++++++|+++++ ++
T Consensus       323 Gll~~~~g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~-~~  361 (364)
T PRK04013        323 GYLVHTAGQRVIRLLPPLIISKDTMEEAKSAIEGVIN-DI  361 (364)
T ss_pred             CcEEeeCCCCEEEEeCCcccCHHHHHHHHHHHHHHHH-HH
Confidence            9999988778999999999999999999999999998 54

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=100.00  E-value=3.2e-39  Score=294.60  Aligned_cols=269  Identities=39%  Similarity=0.646  Sum_probs=238.5

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +++||.++++|||.+..++.+++.......+.+..+++..+|++|++.+++.++   +++++|+++|+++++|.+.++++
T Consensus       128 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~aviiep~~~~~G~~~~~~~  204 (398)
T PRK03244        128 RTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVD---DDTAAVFLEPIQGEAGVVPPPAG  204 (398)
T ss_pred             CCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhc---CCeEEEEEecccCCCCCcCCCHH
Confidence            468999999999999999988876555566666666788899999999999886   57999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      ++++|.++|++||+++|+||+|+|||+.|..+.++..++.||++++||++++|+ |+|++++++++++.+....+..+|.
T Consensus       205 ~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~t~sK~l~~G~-~ig~~~~~~~~~~~~~~~~~~~t~~  283 (398)
T PRK03244        205 YLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVVTLAKGLGGGL-PIGACLAFGPAADLLTPGLHGSTFG  283 (398)
T ss_pred             HHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCEEEEchhhhCCc-ccEEEEEcHHHHhhccCCCCcCCCC
Confidence            999999999999999999999999999998766677889999999999999998 9999999999999888767888899


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      .++++++++.++++.+.++++.++++++++++++.|+++.  + +.+..+++.|.++++.++.    .....+.+.|+++
T Consensus       284 ~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~--~-~~~~~v~g~g~~~~i~~~~----~~~~~~~~~l~~~  356 (398)
T PRK03244        284 GNPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEALG--H-PLVDHVRGRGLLLGIVLTA----PVAKAVEAAAREA  356 (398)
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcC--C-CceeeEeeccEEEEEEEec----cHHHHHHHHHHHC
Confidence            9999999999999988887899999999999999998863  3 2455778899999999863    2567899999999


Q ss_pred             CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      |+++.+...+.+|++|+..++++|++.++++|++++. ++.
T Consensus       357 Gv~~~~~~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~-~~~  396 (398)
T PRK03244        357 GFLVNAVAPDVIRLAPPLIITDAQVDAFVAALPAILD-AAA  396 (398)
T ss_pred             CeEEeecCCCEEEEECCCcCCHHHHHHHHHHHHHHHH-hcc
Confidence            9999987778999999999999999999999999998 653

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=100.00  E-value=5.3e-39  Score=296.39  Aligned_cols=277  Identities=35%  Similarity=0.645  Sum_probs=235.9

Q ss_pred             cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCcccccCCC-----------------HHHHHHHHHh--cCCcE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKE--SGDQI   61 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~--~~~~~   61 (306)
                      |++||+|+|+|||++.+++++++. ......+.|..+++..+|+++                 ++.+++.+..  .++++
T Consensus       141 r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  220 (451)
T PRK06918        141 RQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETI  220 (451)
T ss_pred             CCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCce
Confidence            578999999999999999988874 345566777777776666542                 1234554432  34679


Q ss_pred             EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceee
Q 021893           62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAV  141 (306)
Q Consensus        62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~  141 (306)
                      ++|++||+++.+|.++++++++++|+++|++||+++|+||+|+||++.|..+++..+++.||++++||++++|+ |+||+
T Consensus       221 Aavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t~sK~l~~G~-pig~v  299 (451)
T PRK06918        221 AAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLITVSKSLGAGV-PISGV  299 (451)
T ss_pred             EEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEeeehhhcCCC-ccEEE
Confidence            99999999999999999999999999999999999999999999999998777778888999999999999998 99999


Q ss_pred             EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893          142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE  221 (306)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~  221 (306)
                      ++++++++.+.+..+..++.+++++++++.++++.+.++++.+++++.+++++++|+++...++ .+..+++.|.++.+.
T Consensus       300 ~~~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~-~~~~vrg~G~~~~~~  378 (451)
T PRK06918        300 IGRKEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYN-CIGDVRGLGAMCAFE  378 (451)
T ss_pred             EEcHHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCC-CceeeccceeEEEEE
Confidence            9999999998877788899999999999999999998888999999999999999999876663 667788999999887


Q ss_pred             EecC-----CChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          222 FDKT-----ALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       222 ~~~~-----~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +..+     +.......+.+.|+++||++.+.+  .+++|++|++.+++++|++++++|++++. ++
T Consensus       379 ~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~~~~lrl~p~l~~t~~~id~~l~~l~~~l~-~~  444 (451)
T PRK06918        379 LVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESLQ-AC  444 (451)
T ss_pred             EccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHH-HH
Confidence            7421     112345678888999999998864  47999999998999999999999999998 65

>PRK12403 putative aminotransferase; Provisional

Probab=100.00  E-value=5.6e-39  Score=295.87  Aligned_cols=277  Identities=29%  Similarity=0.495  Sum_probs=233.1

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-----------------HHHHHHHHHh-cCCcEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKE-SGDQIAG   63 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~-~~~~~~~   63 (306)
                      +.+|+.+.++|||.+.+++++++...... +.|..+++..+|++.                 ++.|++.+.+ .++++++
T Consensus       147 r~~ii~~~~~yHG~t~~~~s~s~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaa  225 (460)
T PRK12403        147 KKIMIGRWNGYHGSTLAATALGGMKFMHE-MGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAG  225 (460)
T ss_pred             CcEEEEECCCcCcccHhhhhcCCCccccc-cCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEE
Confidence            35688999999999999999998654433 455566665555432                 3567666643 3467999


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA  143 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~  143 (306)
                      |++||+++++|.+.++++||++|+++|++||++||+||+++||||.|..+.++++++.||+++++|+++||+.++|.+++
T Consensus       226 vI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gK~lggG~~Piga~v~  305 (460)
T PRK12403        226 FVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVL  305 (460)
T ss_pred             EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeEEEcccccccccceEEEEE
Confidence            99999999999999999999999999999999999999999999999999889999999999999999999669999999


Q ss_pred             CHHHHhhcCC----CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHH-HHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893          144 DKEVMLCIQP----GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSA-HLGEELRQHLFKIQQQFPNYVKEVRGRGLFN  218 (306)
Q Consensus       144 ~~~~~~~~~~----~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~  218 (306)
                      ++++++.+..    ..++.||.+|+++++++.++|+.+.++++.++++ ++.+++++.|+++...++ .+..+++.|+++
T Consensus       306 ~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~-~i~~vrG~Gl~~  384 (460)
T PRK12403        306 SKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHP-LVGEVQGAGLVA  384 (460)
T ss_pred             CHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCC-CEEeEeecceEE
Confidence            9999887743    1367899999999999999999999888999996 999999999999887774 888999999999


Q ss_pred             EEEEecCCC-----h---hhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          219 AVEFDKTAL-----P---VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       219 ~i~~~~~~~-----~---~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      .+++..+..     .   .....+.+.++++|+++.+.+ +.+|++|++..|++|++++++.|+++++ ++.
T Consensus       385 gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~-~~~~l~Ppl~it~~eid~~~~~l~~al~-~~~  454 (460)
T PRK12403        385 ALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRSTL-GRMIMAPALVAGRAEIDELVDKTRIAVD-RTA  454 (460)
T ss_pred             EEEEccCccccccccchhHHHHHHHHHHHhCCEEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHH-HHH
Confidence            999864210     0   112345677799999998753 5799999999999999999999999998 764

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=100.00  E-value=8.2e-39  Score=291.98  Aligned_cols=272  Identities=56%  Similarity=0.982  Sum_probs=237.6

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +++|++++++|||.+.+++++++.+.....+.+..+++..+||+|++.||+.+++.++++++|++||+++++|.+.++++
T Consensus       128 ~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~  207 (401)
T TIGR01885       128 QAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDG  207 (401)
T ss_pred             CCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHH
Confidence            46799999999999999999988665656666777778899999999999999876678999999999999999998999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-cccceeeEeCHHHHhhcCCCCccCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAVLADKEVMLCIQPGEHGSTF  160 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~g~~~~~~~~~~~~~~~~~~~~~  160 (306)
                      +|++|+++|++||+++|+||+|+|+|+.|..+..+.+++.||++++||++++| + |+|++++++++++.+....+..++
T Consensus       208 ~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~~~gK~l~~g~~-~ig~v~~~~~i~~~~~~~~~~~t~  286 (401)
T TIGR01885       208 YLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIVLLGKALSGGVY-PVSAVLADDDVMLTIKPGEHGSTY  286 (401)
T ss_pred             HHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEEEeeccccCCCC-CcEEEEEcHHHHhhccCCCCCCCC
Confidence            99999999999999999999999999999877666678899999999999966 6 999999999999988765666788


Q ss_pred             CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH
Q 021893          161 GGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE  240 (306)
Q Consensus       161 ~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~  240 (306)
                      +++++.++++.++++.+.++++.++.+++.+++++.|+++..   +.+..+++.|.++.+.++.........++++.|.+
T Consensus       287 ~~~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~~L~~l~~---~~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~  363 (401)
T TIGR01885       287 GGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKLPK---PIITEVRGRGLLNAIVIDESKTGRTAWDLCLKLKE  363 (401)
T ss_pred             CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhccC---CceeEEeecCeeEEEEeccCcchhHHHHHHHHHHh
Confidence            889999999999999998777889999999999999998742   24556788999999888642111356789999999


Q ss_pred             CCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       241 ~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      +||.+.|..++.+|++|++.+++++|++++++|++++
T Consensus       364 ~Gv~v~~~~~~~lRi~p~l~~t~~~i~~~l~~l~~~l  400 (401)
T TIGR01885       364 KGLLAKPTHGNIIRLAPPLVITEEQLDEGLEIIKKVI  400 (401)
T ss_pred             CCEEEEecCCCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence            9999999888899999999999999999999998876

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=100.00  E-value=1.1e-38  Score=291.24  Aligned_cols=277  Identities=53%  Similarity=0.962  Sum_probs=240.2

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+||+++++|||.+..+++.++.......+.|..+++..++++|+++||+.++.  +++++|++||+++++|.+.++++
T Consensus       122 ~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--~~~~~v~~ep~~~~~G~~~~~~~  199 (400)
T PTZ00125        122 QAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQD--PNVAAFIVEPIQGEAGVIVPDDG  199 (400)
T ss_pred             CCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCC--CCeEEEEEcCccCCCCCccCCHH
Confidence            3689999999999999999988765455556677777888999999999999972  57999999999999999998999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      ++++|.++|++||+++|+||+|+|+++.|..+..+.+++.||++++||++++|+.|+|++++++++++.+....+..++.
T Consensus       200 ~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~~sK~l~~g~~~ig~v~~~~~~~~~~~~~~~~~t~~  279 (400)
T PTZ00125        200 YLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKPGEHGSTYG  279 (400)
T ss_pred             HHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEEEEcccccCCCcCcEEEEEcHHHHhhccCCCCCCCCC
Confidence            99999999999999999999999999999876666778899999999999976449999999999999887766777888


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      ++++.++++.++++.+.++++.++.+++.+.++++|+++.... +.+..+++.|.++++.++... .....++++.|+++
T Consensus       280 ~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~l~~~~-~~~~~~~~~g~~~~v~~~~~~-~~~~~~~~~~l~~~  357 (400)
T PTZ00125        280 GNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELLKKS-PWVKEIRGKGLLNAIVFDHSD-GVNAWDLCLKLKEN  357 (400)
T ss_pred             cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEecccEEEEEEEccCc-chHHHHHHHHHHHC
Confidence            8999999999999998877888999999999999999875443 355567788999998886421 24567899999999


Q ss_pred             CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      ||.+.|.+.++||++|++.++++++++++++|++++. ++..
T Consensus       358 Gv~v~~~~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~-~~~~  398 (400)
T PTZ00125        358 GLLAKPTHDNIIRFAPPLVITKEQLDQALEIIKKVLK-SFDS  398 (400)
T ss_pred             CeEEeecCCCEEEEECCccCCHHHHHHHHHHHHHHHH-HHhc
Confidence            9999998888999999999999999999999999998 7644

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=100.00  E-value=9e-39  Score=289.66  Aligned_cols=266  Identities=37%  Similarity=0.676  Sum_probs=235.7

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+||++.++|||.+..++++++.......+.|..+++..+|++|++.+++.+.   +++++|++||+++++|...++++
T Consensus       112 ~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~ii~e~i~~~~G~~~~~~~  188 (377)
T PRK02936        112 KSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMN---EEVAAVMLEVVQGEGGVIPADPA  188 (377)
T ss_pred             CCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhcc---CCeEEEEEecccCCCCCccCCHH
Confidence            467999999999999999988886666667778888888999999999999997   57999999999999998888999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      ++++|+++|++||+++|+||+|+||++.|..+..+.+++.+|++++||++++|+ |+|++++++++++.+....+..++.
T Consensus       189 ~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~-~ig~v~~~~~~~~~~~~~~~~~t~~  267 (377)
T PRK02936        189 FLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIVTVAKGLGNGI-PVGAMIGKKELGTAFGPGSHGSTFG  267 (377)
T ss_pred             HHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEEEEcccccCCC-ccEEEEEcHHHHhhccCCCCCCCCC
Confidence            999999999999999999999999999988766667788899999999999998 9999999999999988766777888


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      +++++++++.++++.+..+++.++++++.+++++.|++....++ .+..+++.|.++++.+.+     ....+.+.|.++
T Consensus       268 ~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~v~~~g~~~~i~~~~-----~~~~~~~~l~~~  341 (377)
T PRK02936        268 GNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLE-CVKNIRGKGLMIGIECTE-----EVAPVIEQLREE  341 (377)
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCC-cEEeEeecceEEEEEecc-----hHHHHHHHHHHC
Confidence            99999999999999987677889999999999999998654453 555667888999998874     266789999999


Q ss_pred             CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      ||.+.|.+.+++|++|++.++++++++++++|++++
T Consensus       342 gv~v~~~g~~~lRi~p~~~~~~~~i~~~i~~l~~~~  377 (377)
T PRK02936        342 GLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKVL  377 (377)
T ss_pred             CeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence            999999877899999999999999999999998764

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=100.00  E-value=5.5e-39  Score=293.64  Aligned_cols=265  Identities=23%  Similarity=0.379  Sum_probs=220.9

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC-------------------CCHHHHHHHHHhcCCcEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-------------------GDITALEKIFKESGDQIAG   63 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~d~~~le~~i~~~~~~~~~   63 (306)
                      .+||+|+++|||.+.++++++++....... +..+++..+|+                   ++++.++++++++++++++
T Consensus       176 ~~ii~~~~syHG~t~~als~t~~~~~~~~~-~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAA  254 (464)
T TIGR00699       176 LSILSFKGAFHGRLFGSLSTTRSKPIHKLD-IPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAA  254 (464)
T ss_pred             CEEEEECCCcCCccHHHHHhcCCccccccC-CCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEE
Confidence            489999999999999999998864333222 11122222222                   2467788889876678999


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCC--CcEEEeccccc-CCccccee
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR--PDMVILGKALG-GGVIPVSA  140 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~--~d~~s~sK~~~-~G~~~~g~  140 (306)
                      |++||+++++|.+.++++||++|+++|++||++||+||+++|||+.|..|.++++++.  ||+++++|+++ +|+     
T Consensus       255 vI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~gK~lg~gG~-----  329 (464)
T TIGR00699       255 IIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTAGY-----  329 (464)
T ss_pred             EEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEehhhhccCCc-----
Confidence            9999999999999999999999999999999999999999999999999889999987  99999999996 676     


Q ss_pred             eEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE--EeeeEE
Q 021893          141 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR--GRGLFN  218 (306)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~--~~g~~~  218 (306)
                      +..++ .+.......+.+||.+|+++++++.++++.+.++++.+++++..+++++.|+++...+|..+..++  +.|+++
T Consensus       330 ~~~~~-~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~  408 (464)
T TIGR00699       330 FFHDP-AFRPNKPYRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFI  408 (464)
T ss_pred             cccch-hccCCCCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEE
Confidence            33332 222223345788999999999999999999999999999999999999999999877744677888  999999


Q ss_pred             EEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          219 AVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       219 ~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      .+++++   ......+.+.|+++|+++.+.+.+.+||.|++.++++||+.++++|.+++
T Consensus       409 gie~~~---~~~~~~i~~~~~~~Gvl~~~~g~~~ir~~Ppl~it~~eid~~~~~l~~~~  464 (464)
T TIGR00699       409 AWDTPD---EAKRDKLLKKARNNGVNIGGCGVKAIRLRPMLVFQKHHADIFLEIISKII  464 (464)
T ss_pred             EEecCC---HHHHHHHHHHHHHCCcEEecCCCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence            999863   33467899999999999998777899999999999999999999998764

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=100.00  E-value=3.6e-38  Score=277.06  Aligned_cols=275  Identities=28%  Similarity=0.457  Sum_probs=231.4

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccc--cCCCCCCC-----cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIR--GFGPLLPG-----HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG   74 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~--~~~~~~~~-----~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G   74 (306)
                      |+|||.|+|+|||+...++.-.++.....  +-.|..|.     ++.+||||++++++++++.++++++||+||+..+.|
T Consensus       135 R~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g  214 (432)
T COG0001         135 RDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMG  214 (432)
T ss_pred             CCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCC
Confidence            68999999999999999886554321111  12222222     599999999999999999989999999999999999


Q ss_pred             cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCC
Q 021893           75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG  154 (306)
Q Consensus        75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~  154 (306)
                      .+.|.++||++|+++|++||++||.||+.+|| |.+..-+...+++.||+.+++|.+|||+ |+|.+.+++++|+.+.+.
T Consensus       215 ~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGF-R~~~gGaq~~~gi~PDlttlGKiIGGGl-P~ga~gGr~eiM~~~~p~  292 (432)
T COG0001         215 VVPPEPGFLEGLRELTEEHGALLIFDEVITGF-RVALGGAQGYYGVEPDLTTLGKIIGGGL-PIGAFGGRAEIMEQLAPL  292 (432)
T ss_pred             CCCCCHHHHHHHHHHHHHcCcEEEEecchhhc-ccCCcccccccCcCcchhhhhhhhcCCc-ceeeeccHHHHHhhhCCC
Confidence            99999999999999999999999999999998 5554445788999999999999999999 999999999999988764


Q ss_pred             ---CccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC----
Q 021893          155 ---EHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA----  226 (306)
Q Consensus       155 ---~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~----  226 (306)
                         .+.+|+++|+++++|..++++.+.+ +...+++.++.+.|++.|++..... +....+...|.++.+.+.+.+    
T Consensus       293 g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~-g~~~~v~~~gsm~~i~F~~~~~~n~  371 (432)
T COG0001         293 GPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERH-GIPLTVNRVGSMFGIFFTEEGVRNY  371 (432)
T ss_pred             CCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEeeecceEEEEecCCCCCCH
Confidence               6888999999999999999999988 4589999999999999999998876 466788889999888877632    


Q ss_pred             ------ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          227 ------LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       227 ------~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                            .......+.+.|+++||++.|..-...-+|  ..+++++|++.+++++++++ ++.
T Consensus       372 ~da~~sd~~~~~~~~~~~l~~GV~l~ps~~ea~flS--~ahte~di~~~~~a~~~~~~-~~~  430 (432)
T COG0001         372 ADAKRSDVERFAKFFHHLLNRGVYLAPSQFEAGFLS--TAHTEEDIDRTLEAADEAFK-ELA  430 (432)
T ss_pred             HHHHhhchHHHHHHHHHHHhCCcccCCccccceeee--cccCHHHHHHHHHHHHHHHH-Hhh
Confidence                  111245677799999999999752222244  78999999999999999998 654

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=100.00  E-value=3.9e-38  Score=288.15  Aligned_cols=271  Identities=34%  Similarity=0.569  Sum_probs=231.2

Q ss_pred             cceEEEEecCCCCcccchhcccCCcc-ccccCCCCCCCccccc-----------CCCHHHHHHHHHhcCCcEEEEEEccc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNE-AIRGFGPLLPGHLKVD-----------FGDITALEKIFKESGDQIAGFLFEPI   69 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~~d~~~le~~i~~~~~~~~~v~v~~~   69 (306)
                      +.+||+|.++|||.+.++++++++.. ....+.|..+++...+           ++|++++++++.++++++++|++||+
T Consensus       137 r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv  216 (427)
T TIGR00508       137 RQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPI  216 (427)
T ss_pred             ccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEech
Confidence            46899999999999999999988532 3344444444433222           12578888899876678999999997


Q ss_pred             -cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893           70 -QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM  148 (306)
Q Consensus        70 -~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~  148 (306)
                       ++.+|.+++++++|++|+++|++||+++|+||+|+|+|+.|..|..+++++.||++++||+++||+.+++.++.+++++
T Consensus       217 ~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~~gK~l~gG~~p~~a~~~~~~~~  296 (427)
T TIGR00508       217 VQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPDILCVGKALTGGYMTLSATVTTDKVA  296 (427)
T ss_pred             hcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCCEEEechhhhcCcccceEEEEcHHHH
Confidence             8888999999999999999999999999999999999999998888889999999999999999965899999999999


Q ss_pred             hhcCCC-----CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893          149 LCIQPG-----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD  223 (306)
Q Consensus       149 ~~~~~~-----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~  223 (306)
                      +.+...     .+..||.+|+++++++.++++.+.++++.++++++.++++++|+++.. .+ .+..+++.|.++.+.+.
T Consensus       297 ~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~-~~-~i~~vrg~G~~~~i~~~  374 (427)
T TIGR00508       297 QTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGEWQKQVSAIENQLKRELSPLRK-NP-VVKDVRVLGAIGVVEMY  374 (427)
T ss_pred             HHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc-CC-CEEeEeccccEEEEEEC
Confidence            887642     367788899999999999999998888999999999999999999754 32 45688899999999986


Q ss_pred             cCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          224 KTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       224 ~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +   ......+.+.|+++||++.+.+ +.+|++|++.+|++||++++++++++++
T Consensus       375 ~---~~~~~~~~~~l~~~Gv~~~~~~-~~l~~~ppl~~t~~~id~~~~~l~~~l~  425 (427)
T TIGR00508       375 K---PVNVEELQKKFVEQGVWIRPFG-KLIYVMPPYIITTEQLQKLTAALIEALH  425 (427)
T ss_pred             C---ccCHHHHHHHHHHCCeEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence            4   2346789999999999998764 5899999999999999999999999987

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK08297 L-lysine aminotransferase; Provisional

Probab=100.00  E-value=2.3e-38  Score=290.43  Aligned_cols=271  Identities=29%  Similarity=0.468  Sum_probs=221.5

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCC------ccccc-------------CCCHHHHHHHHHhcCCcEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG------HLKVD-------------FGDITALEKIFKESGDQIA   62 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-------------~~d~~~le~~i~~~~~~~~   62 (306)
                      |+|||.|+|+|||.+.+++++++.......+.|..+.      ...+|             .++++.+++.+.+++++++
T Consensus       148 r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iA  227 (443)
T PRK08297        148 GTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIA  227 (443)
T ss_pred             CceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEE
Confidence            4789999999999999999998743222221122110      01111             1245677888887778899


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893           63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL  142 (306)
Q Consensus        63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~  142 (306)
                      +|++||+++++|.++++++||++|+++|++||+++|+||+++|||+.|..+.++++++.||+++++|+++     +|.++
T Consensus       228 avI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~-----~~a~l  302 (443)
T PRK08297        228 CFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKKTQ-----VCGIM  302 (443)
T ss_pred             EEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEEeccccc-----cccee
Confidence            9999999999999999999999999999999999999999999999999988899999999999999985     22233


Q ss_pred             eCHHHHhh----cC-CCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893          143 ADKEVMLC----IQ-PGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF  217 (306)
Q Consensus       143 ~~~~~~~~----~~-~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~  217 (306)
                      ..+++.+.    +. ...+.+||.+|+++++++.++++.+.++++.++++++.++++++|+++...++.....+++.|++
T Consensus       303 ~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~  382 (443)
T PRK08297        303 AGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLM  382 (443)
T ss_pred             cchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceE
Confidence            44443321    21 23478899999999999999999999889999999999999999999987775333488999999


Q ss_pred             EEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          218 NAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       218 ~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +.+.+.+   ......+++.|+++||++.|.+.+.+|++|++.+++++++.++++|++++. ++
T Consensus       383 ~~i~~~~---~~~~~~~~~~l~~~Gvl~~~~~~~~lr~~P~l~~t~~eid~~l~~l~~~l~-~~  442 (443)
T PRK08297        383 CAFDLPT---TADRDEVIRRLWEEGVLVLPCGERSIRFRPALTVTTEEIDAAIDALRRALP-EV  442 (443)
T ss_pred             EEEEecC---HHHHHHHHHHHHHCCEEEecCCCCeEEEECCccCCHHHHHHHHHHHHHHHH-hh
Confidence            9999864   334568999999999999988778999999999999999999999999987 54

>PRK06148 hypothetical protein; Provisional

Probab=100.00  E-value=4.2e-38  Score=312.82  Aligned_cols=276  Identities=31%  Similarity=0.446  Sum_probs=235.0

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCC-CCc--------ccccCC--C-------HHHHHHHHH---hcCCc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLL-PGH--------LKVDFG--D-------ITALEKIFK---ESGDQ   60 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~--d-------~~~le~~i~---~~~~~   60 (306)
                      |++||+|.++|||.|.+++++++.. +...+.+.. +.+        ...|++  +       .+.+++.++   .++++
T Consensus       706 r~~ii~~~~~YHG~t~~a~s~s~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~  784 (1013)
T PRK06148        706 QRDAIVLDHAYHGTTTELIDLSPYK-FNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRG  784 (1013)
T ss_pred             CCeEEEEcCCccCCCcchhhcCchh-hcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCc
Confidence            5789999999999999999988743 333333332 222        233454  2       145666665   23467


Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccccCCCCCcEEEecccccCCcccce
Q 021893           61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVRPDMVILGKALGGGVIPVS  139 (306)
Q Consensus        61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~~~~~~~d~~s~sK~~~~G~~~~g  139 (306)
                      +++|++||+++.+|.++++++||++++++|++||+++|+||+++||||.|. .|.++++++.||+++++|+++||+ |+|
T Consensus       785 iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~lggG~-Plg  863 (1013)
T PRK06148        785 PAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGNGH-PMG  863 (1013)
T ss_pred             eEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeecccccCCc-ceE
Confidence            999999999999999999999999999999999999999999999999996 788899999999999999999998 999


Q ss_pred             eeEeCHHHHhhcCCC-CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893          140 AVLADKEVMLCIQPG-EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN  218 (306)
Q Consensus       140 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~  218 (306)
                      .+++++++++.+.+. .+.+||.+|+++++++.++++.+.++++.+++++++++++++|+++...++ .+..+++.|+++
T Consensus       864 av~~~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~-~i~~VrG~Gl~~  942 (1013)
T PRK06148        864 AVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFD-IIGDVRGMGLFL  942 (1013)
T ss_pred             EEEEcHHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC-CceEEeeeceEE
Confidence            999999999988754 377899999999999999999999999999999999999999999988874 788999999999


Q ss_pred             EEEEecCC-----ChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          219 AVEFDKTA-----LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       219 ~i~~~~~~-----~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .+++..+.     .......+.+.|+++||++.+.+  .+.+||.|++.+|++++++++++|++++. ++
T Consensus       943 gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~-~~ 1011 (1013)
T PRK06148        943 GIELVTDRKTKAPATAIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFSRADADHLLEVLDDVLA-AA 1011 (1013)
T ss_pred             EEEecCCccccCccHHHHHHHHHHHHhCCeEEeccCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHH-HH
Confidence            99986422     11235578899999999998754  48999999999999999999999999998 64

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=100.00  E-value=7.1e-38  Score=286.90  Aligned_cols=271  Identities=27%  Similarity=0.439  Sum_probs=227.3

Q ss_pred             cceEEEEecCCCCcccchhcccCCcccc------ccCC-CCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAI------RGFG-PLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG   74 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G   74 (306)
                      |++||.|+++|||++.++++.++.....      ..+. +..+++..+|++|++.+++.++++++++++|++||+++++|
T Consensus       135 r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G  214 (428)
T PRK12389        135 RTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFG  214 (428)
T ss_pred             CCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCC
Confidence            5799999999999999999887743221      1111 22356788999999999999988777899999999999999


Q ss_pred             cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC-
Q 021893           75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP-  153 (306)
Q Consensus        75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~-  153 (306)
                      .+.++++||++|+++|++||+++|+||+++|| |.+..+..+++++.||+++++|+++||+ |+|.+++++++++.+.+ 
T Consensus       215 ~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv~PDivt~gK~lggG~-Pi~av~~~~~i~~~~~~~  292 (428)
T PRK12389        215 IVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGVEPDLTALGKIIGGGL-PIGAYGGRKDIMEQVAPL  292 (428)
T ss_pred             CcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCCCCCeeeechhhcCCC-ceeEEeEHHHHHhhhccC
Confidence            99999999999999999999999999999999 8877666778899999999999999998 99999999999998853 


Q ss_pred             --CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecCCC---
Q 021893          154 --GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTAL---  227 (306)
Q Consensus       154 --~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~---  227 (306)
                        ..+.+||.+|+++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+ ++.| ++.+.+..+..   
T Consensus       293 ~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~~~~v~r~~g-~~gi~~~~~~~~~~  370 (428)
T PRK12389        293 GPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHG-ITITINRLKG-ALTVYFTDEKVTNY  370 (428)
T ss_pred             CCcccccCCccCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCc-EEEEEEeCCCCCCh
Confidence              3577899999999999999999999888999999999999999999877664 44555 5666 66677653210   


Q ss_pred             -------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          228 -------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       228 -------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                             ......+.+.|+++||++.+.+.+.+  .|++.++++||++++++++++++
T Consensus       371 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~--~~~l~~t~e~id~~~~~l~~~l~  426 (428)
T PRK12389        371 DQAERSDGEAFGKFFKLMLNQGINLAPSKYEAW--FLTTAHTEEDIEETLEAVDRAFA  426 (428)
T ss_pred             hhhcccCHHHHHHHHHHHHHCCcEeecCCCCCe--eecCCCCHHHHHHHHHHHHHHHH
Confidence                   11245788999999999988644443  46799999999999999999987

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=100.00  E-value=7.5e-38  Score=301.21  Aligned_cols=274  Identities=24%  Similarity=0.367  Sum_probs=222.2

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccC-CCCCC-Cccc----------------ccCC--C---------------
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGF-GPLLP-GHLK----------------VDFG--D---------------   46 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~-~~~~~-~~~~----------------~~~~--d---------------   46 (306)
                      |.|||.+.|+|||.|+++++++++..+...+ .|++. ...+                +|++  +               
T Consensus       472 r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  551 (817)
T PLN02974        472 ELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEV  551 (817)
T ss_pred             CCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCcccccccccccccccccccc
Confidence            5789999999999999999999876665544 34321 1111                1111  0               


Q ss_pred             --------------HHHHHHHHHh-----cCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcc
Q 021893           47 --------------ITALEKIFKE-----SGDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL  106 (306)
Q Consensus        47 --------------~~~le~~i~~-----~~~~~~~v~v~~~-~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~  106 (306)
                                    .+.+++.|++     .++++++|++||+ ++.+|+++++++|+++|+++|++||++||+||+++||
T Consensus       552 f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGf  631 (817)
T PLN02974        552 FDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGL  631 (817)
T ss_pred             ccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCC
Confidence                          2557777763     3467999999995 8999999999999999999999999999999999999


Q ss_pred             cccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC------CCccCCCCCCHHHHHHHHHHHHHHhhc
Q 021893          107 ARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP------GEHGSTFGGNPLASAVAIASLDVIRDE  180 (306)
Q Consensus       107 ~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~aa~~al~~~~~~  180 (306)
                      ||.|..|+++++++.||+++++|+++||+.|+|.+++++++++.+..      ..|++||++|+++++++.++++.+.++
T Consensus       632 GRtG~~fa~e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~  711 (817)
T PLN02974        632 WRLGVESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDP  711 (817)
T ss_pred             CcccchhhHHhcCCCCCEEeecccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcc
Confidence            99999999999999999999999999996699999999999998852      248899999999999999999999887


Q ss_pred             cHHH----HHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC-----hhhHHHHHHHHH-HCCceeccCCC
Q 021893          181 KLAE----RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----PVSAYDICLKMK-ERGILAKPTHD  250 (306)
Q Consensus       181 ~~~~----~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~-----~~~~~~~~~~l~-~~Gi~~~~~~~  250 (306)
                      ++.+    +.+++.+++.+.|.+....+ +.+.++++.|+++.+++..+..     ...+..+.+.++ ++|+++++.+ 
T Consensus       712 ~~~~~l~~~~~~l~~~l~~~l~~~l~~~-p~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~G-  789 (817)
T PLN02974        712 STNPNLIPPGSRLRELWDEELVRAISSL-PNVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPLG-  789 (817)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEecC-
Confidence            5444    44555555566663333445 4889999999999999975321     112456788888 9999999874 


Q ss_pred             CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          251 TIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       251 ~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      +.+++.|+..+++++++++++.|.+.|
T Consensus       790 nvi~l~pP~~i~~e~l~~~~~~l~~~~  816 (817)
T PLN02974        790 NVVYLMCGPTTSPETCTRLLRKVYRRL  816 (817)
T ss_pred             CEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence            799999999999999999999998876

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=100.00  E-value=1.1e-37  Score=284.88  Aligned_cols=268  Identities=49%  Similarity=0.824  Sum_probs=234.0

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+||++.++|||.+.++++++.++.....+.|..+++.++||+|++.+|+.+.   +++++|+++++++++|.+.+++++
T Consensus       133 ~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~---~~~~aii~e~~~~~~G~~~~~~~~  209 (401)
T PRK00854        133 AEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFGDAEALEAAIT---PNTVAFLVEPIQGEAGVIIPPAGY  209 (401)
T ss_pred             ceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCCCHHHHHHHhC---CCeEEEEEccccCCCCCcCCCHHH
Confidence            58999999999999998888877666666777888889999999999999997   579999999999999999988999


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCC
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGG  162 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~  162 (306)
                      |++|+++|++||+++|+||+|+|+++.|..+..+..++.+|++++||++++|+.|+|++++++++++.+....+..+++.
T Consensus       210 l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~~~~~~~t~~~  289 (401)
T PRK00854        210 FTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPGQHGSTFGG  289 (401)
T ss_pred             HHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEEecccccCCccCeEEEEEcHHHHhcccCCCCCCCCCc
Confidence            99999999999999999999999998887665566788899999999999774499999999999998876667778888


Q ss_pred             CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCC
Q 021893          163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG  242 (306)
Q Consensus       163 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~G  242 (306)
                      +++.++++.++++.+.+++..++++++++++++.|+++...   .+..+++.|.++.+.+...  .....++++.|+++|
T Consensus       290 ~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~~~---~~~~~~g~g~~~~i~~~~~--~~~~~~~~~~L~~~G  364 (401)
T PRK00854        290 NPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIRSN---IVREVRGRGLMLAVELEPE--AGGARQYCEALKERG  364 (401)
T ss_pred             CHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhccC---ceEEEeccceEEEEEEecC--chhHHHHHHHHHHCC
Confidence            99999999999999887778899999999999999987422   3345678898888877532  235678999999999


Q ss_pred             ceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          243 ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       243 i~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      |.+.+.+.+++|++|++.+++++|++++++|++++.
T Consensus       365 V~v~~~~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~  400 (401)
T PRK00854        365 LLAKDTHDHTIRLAPPLVITREQVDWALEQIAKVLA  400 (401)
T ss_pred             eEEecCCCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence            999887778999999999999999999999998764

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=100.00  E-value=1.7e-37  Score=283.21  Aligned_cols=268  Identities=44%  Similarity=0.758  Sum_probs=236.8

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+|+++.++|||.+..++..++.......+.|..+++..++++|++++++.+.   +++++|+++|+++++|..++++++
T Consensus       128 ~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~---~~~~~vii~p~~~~~G~~~~~~~~  204 (396)
T PRK02627        128 PEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAIT---DKTAAVMLEPIQGEGGVNPADKEY  204 (396)
T ss_pred             CeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcC---CCeEEEEEecccCCCCCccCCHHH
Confidence            68999999999999999988876655556666667778889999999999995   579999999999999988889999


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCC
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGG  162 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~  162 (306)
                      +++|.++|++||++||+||+|+||++.|..++++..++.+|++++||++++|+ |+||+++++++++.+....+..+++.
T Consensus       205 l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~t~sK~~~~G~-rig~~~~~~~~~~~~~~~~~~~t~~~  283 (396)
T PRK02627        205 LQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIMTLAKGLGGGV-PIGAVLAKEKVADVFTPGDHGSTFGG  283 (396)
T ss_pred             HHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCCEEEEcchhhCCc-ccEEEEEcHHHHhccCCCCCCCCCCC
Confidence            99999999999999999999999998887666667788999999999999999 99999999999998887667788999


Q ss_pred             CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCC
Q 021893          163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG  242 (306)
Q Consensus       163 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~G  242 (306)
                      ++++++++.++++.+..+++.++++++.+.+++.|+++...++ .+..+++.|.++++.+.     .+..++++.|+++|
T Consensus       284 ~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~g~~~~i~~~-----~~~~~~~~~l~~~G  357 (396)
T PRK02627        284 NPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYP-GIKEVRGLGLMIGIELD-----RPAAEIVKKALEKG  357 (396)
T ss_pred             CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC-CeeeeccCcEEEEEEec-----CcHHHHHHHHHHCC
Confidence            9999999999999888778899999999999999998876653 55567778999999873     24678999999999


Q ss_pred             ceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          243 ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       243 i~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      |.+.|.+.+++|++|++..+++++++++++|+++++ ++
T Consensus       358 v~v~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~l~-~~  395 (396)
T PRK02627        358 LLINVTGDNVLRLLPPLIISKEEIDEAVDRLEEVLK-EL  395 (396)
T ss_pred             eEEeecCCCEEEEECCcccCHHHHHHHHHHHHHHHH-hh
Confidence            999998778999999989999999999999999987 54

>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]

Probab=100.00  E-value=1.1e-37  Score=266.07  Aligned_cols=269  Identities=32%  Similarity=0.517  Sum_probs=230.7

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC------------------HHHHHHHHHh-cCCcEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKE-SGDQIAG   63 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~i~~-~~~~~~~   63 (306)
                      .+||.+.++|||.+..++++++....+.++.-..+++.....+|                  .++||..+.. -+.++++
T Consensus       136 ~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAa  215 (442)
T KOG1404|consen  136 LDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAA  215 (442)
T ss_pred             ceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeE
Confidence            58999999999999999999996555544422223432222222                  2455555553 2356999


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA  143 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~  143 (306)
                      +++|++++.+|.+.+++.+|+++.++|+++|.++|.||+|+||||.|..|.++..++.||++|++|++|+|+ ++|.++.
T Consensus       216 fiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmAKgiGnG~-Pl~AVvt  294 (442)
T KOG1404|consen  216 FIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMAKGIGNGF-PLGAVVT  294 (442)
T ss_pred             EEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHHHHHhhccCCC-cceeeec
Confidence            999999999999999999999999999999999999999999999999999999999999999999999998 9999999


Q ss_pred             CHHHHhhcCCCC-ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE
Q 021893          144 DKEVMLCIQPGE-HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF  222 (306)
Q Consensus       144 ~~~~~~~~~~~~-~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~  222 (306)
                      ++++++.+.+.. +..||.+|+++++++.++++.+++++++++....+.+|++.|.++...+| .+-++|+.|+|+.+++
T Consensus       295 t~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~-iIGdVRG~GLm~GvE~  373 (442)
T KOG1404|consen  295 TPEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQENAAEVGSYLLEKLAALKDKHP-IIGDVRGRGLMLGVEL  373 (442)
T ss_pred             CHHHHHHHHhccccccccCCCchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCC-ceeecccceeEEEEEE
Confidence            999999987765 88999999999999999999999999999999999999999999999884 8999999999999998


Q ss_pred             ecCC------ChhhHHHHHHHHHHCCceeccC--CCCEEEEeCCCCCCHHHHHHHHHHH
Q 021893          223 DKTA------LPVSAYDICLKMKERGILAKPT--HDTIVRLTPPLSISSNELQEGSKAL  273 (306)
Q Consensus       223 ~~~~------~~~~~~~~~~~l~~~Gi~~~~~--~~~~lRi~~~~~~t~~~i~~~~~~l  273 (306)
                      -++.      .......+.+.|.++|+.+.-+  ..+.+||+|+.+.|++|++.+++..
T Consensus       374 V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~vfriaPPlciT~edi~f~~~~~  432 (442)
T KOG1404|consen  374 VSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGNVFRIAPPLCITKEDIDFAVEYF  432 (442)
T ss_pred             ecccCCCCCcchHHHHHHHHHHHHhCeeeecccccceEEEecCCeeccHHHHHHHHHHH
Confidence            8654      1123456889999999999765  3669999999999999998777755

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=100.00  E-value=8.8e-37  Score=278.56  Aligned_cols=272  Identities=26%  Similarity=0.432  Sum_probs=224.0

Q ss_pred             cceEEEEecCCCCcc---cchhcccCCcc--ccccC--CCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893            2 QAIIVSCCGCFHGRT---LAAISMSCDNE--AIRGF--GPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG   74 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~---~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G   74 (306)
                      |++||.|.++|||++   .++++.++...  ....+  .+.++.+..++|+|++.+++.++++++++++|++||++++.|
T Consensus       136 r~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G  215 (433)
T PRK00615        136 RSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMG  215 (433)
T ss_pred             CCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCC
Confidence            579999999999988   66666665321  11222  223344577899999999999987667899999999999999


Q ss_pred             cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCC
Q 021893           75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG  154 (306)
Q Consensus        75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~  154 (306)
                      .+.++++|+++|+++|++||+++|+||+|+|| |.|..+..+++++.||++++||+++||+ ++|++++++++++.+.+.
T Consensus       216 ~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv~PDi~~~gK~lggG~-p~~av~~~~~i~~~~~~~  293 (433)
T PRK00615        216 VVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKPDITVYGKILGGGL-PAAAVVAHKSIMDHLAPE  293 (433)
T ss_pred             cccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCCCCCeEEEcccccCCc-ceeeeeecHHHHhhhcCC
Confidence            99999999999999999999999999999999 8888777888999999999999999998 999999999999988532


Q ss_pred             ---CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC----
Q 021893          155 ---EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----  227 (306)
Q Consensus       155 ---~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~----  227 (306)
                         .+.+|+.++++++++++++++.+.++++.++++++.++++++|+++....+-.+..++ .|+++.+.+..++.    
T Consensus       294 ~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~G~~~~i~~~~~~~~~~~  372 (433)
T PRK00615        294 GTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-YGSMFSFFFNENRPNNLA  372 (433)
T ss_pred             CCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-eceEEEEEEeCCCCCChH
Confidence               3667888999999999999999988889999999999999999998665321245556 89999999975320    


Q ss_pred             ------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          228 ------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       228 ------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                            ......+.+.|+++||++.+...+..  .++..+|++||++++++++++++
T Consensus       373 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~--~ls~~ht~~did~~~~a~~~~~~  427 (433)
T PRK00615        373 EAQLSDIEAFQTFYQSAFSKGVYLSPSPFEAS--FLSSAHSMENLDYAQNVLIDSLE  427 (433)
T ss_pred             HHhhCCHHHHHHHHHHHHHCCeeecCcccccc--ceecCCCHHHHHHHHHHHHHHHH
Confidence                  11244789999999999987643322  33477899999999999999998

>PRK06149 hypothetical protein; Provisional

Probab=100.00  E-value=7.1e-37  Score=303.93  Aligned_cols=275  Identities=30%  Similarity=0.526  Sum_probs=228.1

Q ss_pred             cceEEEEecCCCCcccchhcccCCccc-cccCCCCC--------CCcccccC--CC-----HHHHHHHHH---hcCCcEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEA-IRGFGPLL--------PGHLKVDF--GD-----ITALEKIFK---ESGDQIA   62 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~-~~~~~~~~--------~~~~~~~~--~d-----~~~le~~i~---~~~~~~~   62 (306)
                      +++||++.++|||++.+++++++.... ...+.+..        +.....++  ++     .+.+++.++   +++++++
T Consensus       667 r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iA  746 (972)
T PRK06149        667 RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLA  746 (972)
T ss_pred             CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceE
Confidence            578999999999999998877653211 11111111        12222233  22     345555554   2456899


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccccCCCCCcEEEecccccCCcccceee
Q 021893           63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVRPDMVILGKALGGGVIPVSAV  141 (306)
Q Consensus        63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~  141 (306)
                      +|++||+++++|.+.++++||++|+++|++||+++|+||+|+|||+.|. .+.++++++.||+++++|++++|+ ++|++
T Consensus       747 avI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~gK~lg~G~-Pl~av  825 (972)
T PRK06149        747 GFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNGH-PLGAV  825 (972)
T ss_pred             EEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEecccccCCe-eeEEE
Confidence            9999999999999999999999999999999999999999999999997 567888999999999999999998 99999


Q ss_pred             EeCHHHHhhcCC-CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEE
Q 021893          142 LADKEVMLCIQP-GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV  220 (306)
Q Consensus       142 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i  220 (306)
                      ++++++++.+.. ..+.+++.+|+++++++.++++.+.++++.++.++.+++++++|+++..+++ .+..+++.|+++.+
T Consensus       826 ~~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~-~i~~vrG~Gl~~gv  904 (972)
T PRK06149        826 ITRREIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHP-LIGAVHGMGLYLGV  904 (972)
T ss_pred             EEcHHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEeecceEEEE
Confidence            999999988864 3345678899999999999999999999999999999999999999988774 88899999999999


Q ss_pred             EEecCC-----ChhhHHHHHHHHHHCCceeccCCC--CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          221 EFDKTA-----LPVSAYDICLKMKERGILAKPTHD--TIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       221 ~~~~~~-----~~~~~~~~~~~l~~~Gi~~~~~~~--~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ++..+.     .......+++.|+++||++.+.+.  +.+||.|++.++++++++++++|++++.
T Consensus       905 el~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~  969 (972)
T PRK06149        905 ELVRDRQTLEPATEETAAICDRLLELGVIMQPTGDHLNILKIKPPLCLDRESADFFVDMLDRVLT  969 (972)
T ss_pred             EEecCcccCCCChHHHHHHHHHHHhCCeEEeecCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHH
Confidence            986321     122356789999999999998753  7899999999999999999999999987

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=100.00  E-value=7.9e-37  Score=280.05  Aligned_cols=267  Identities=27%  Similarity=0.441  Sum_probs=217.4

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCC------cccccC-------------CCHHHHHHHHHhcCCcEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG------HLKVDF-------------GDITALEKIFKESGDQIA   62 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-------------~d~~~le~~i~~~~~~~~   62 (306)
                      +++||.|+++|||.+.+++++++.......+.|..+.      ...+|+             ++++++++.+.+++++++
T Consensus       141 ~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iA  220 (431)
T TIGR03251       141 GTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIA  220 (431)
T ss_pred             CceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEE
Confidence            4789999999999999999998854344433333211      011121             245667778877778899


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893           63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL  142 (306)
Q Consensus        63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~  142 (306)
                      +|++||+++++|.++++++||++|+++|++||++||+||+|+|||+.|..|.++++++.||+++++|++.    ..|++.
T Consensus       221 avivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~gK~~~----~~g~~~  296 (431)
T TIGR03251       221 CFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKTQ----VCGIMA  296 (431)
T ss_pred             EEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEEecccCc----cceEEe
Confidence            9999999999999999999999999999999999999999999999999988899999999999999973    122344


Q ss_pred             eCH--HHHhh-cC-CCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893          143 ADK--EVMLC-IQ-PGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN  218 (306)
Q Consensus       143 ~~~--~~~~~-~~-~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~  218 (306)
                      ..+  +++.. +. ...+..||++|+++++++.++++.+.++++.++++++.++++++|+++...+++.+..+++.|.++
T Consensus       297 ~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~  376 (431)
T TIGR03251       297 GRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMC  376 (431)
T ss_pred             cchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeE
Confidence            332  22321 21 234678899999999999999999988889999999999999999998777644777889999999


Q ss_pred             EEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          219 AVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       219 ~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      .+.++.   ......+.+.|+++||++.+.+.+.+|++|++.++++||++++++|++
T Consensus       377 ~i~~~~---~~~~~~~~~~l~~~Gvl~~~~g~~~lr~~P~l~~t~~eid~~l~~l~~  430 (431)
T TIGR03251       377 AFDLPS---TADRDEVIRQLYREGVLLLGCGERSIRFRPPLTVTREEIDAAIDAIRR  430 (431)
T ss_pred             EEEeCC---HHHHHHHHHHHHhCCeEEecCCCCeEEEECCccCCHHHHHHHHHHHHh
Confidence            999864   334567999999999999987778899999999999999999999875

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=100.00  E-value=1.1e-36  Score=280.03  Aligned_cols=272  Identities=23%  Similarity=0.354  Sum_probs=216.7

Q ss_pred             cceEEEEecCCCCcccchhcc--cCCccccccCCCCC-----CCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893            2 QAIIVSCCGCFHGRTLAAISM--SCDNEAIRGFGPLL-----PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG   74 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~--~~~~~~~~~~~~~~-----~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G   74 (306)
                      |+|||.|+|+|||++....+.  ++......+..+..     +.+..+||||++.|++.++++++++++|++||+++++|
T Consensus       181 r~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G  260 (474)
T PLN02482        181 REKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSG  260 (474)
T ss_pred             CCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEECCCCCCCC
Confidence            579999999999977543333  22111111112222     24577899999999999988777899999999999999


Q ss_pred             cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC-
Q 021893           75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP-  153 (306)
Q Consensus        75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~-  153 (306)
                      .+.++++||++|+++|++||++||+||+++|| +.|..+..+++++.||+++++|+++||+ |+|.+++++++++.+.+ 
T Consensus       261 ~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv~PDi~t~gK~lggG~-Pigav~g~~ei~~~~~~~  338 (474)
T PLN02482        261 FIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGITPDLTTLGKVIGGGL-PVGAYGGRREIMEMVAPA  338 (474)
T ss_pred             CcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCCCCCEEEecchhhCCC-ceEEEEEcHHHHHhhccC
Confidence            99999999999999999999999999999999 8888777788999999999999999998 99999999999998863 


Q ss_pred             --CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-----
Q 021893          154 --GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----  226 (306)
Q Consensus       154 --~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-----  226 (306)
                        ..+.+||.+|+++++++.++|+.+.++++.++++++.++++++|+++....+ ........+.++.+.+..++     
T Consensus       339 ~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g-~~~~~~~v~g~~gi~f~~~~~~~~~  417 (474)
T PLN02482        339 GPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAG-HEMCGGYISGMFGFFFTEGPVYNFA  417 (474)
T ss_pred             CCcccccCcchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEcccceEEEEEEecCCccChh
Confidence              3467889999999999999999998888999999999999999999876642 11111222335555554321     


Q ss_pred             -----ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          227 -----LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       227 -----~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                           .......+.+.|+++||++.+.+... + .|++.+|++||+++++++++++.
T Consensus       418 ~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~-~-~psl~ht~~dId~~l~al~~~l~  472 (474)
T PLN02482        418 DAKKSDTAKFARFHRGMLEEGVYLAPSQFEA-G-FTSLAHTEEDIDFTIAAAERVLA  472 (474)
T ss_pred             hhccCCHHHHHHHHHHHHHCCeEEeccCCCC-C-cCCCCCCHHHHHHHHHHHHHHHH
Confidence                 11224578899999999998853322 1 37899999999999999999987

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=100.00  E-value=1.4e-36  Score=274.91  Aligned_cols=266  Identities=31%  Similarity=0.562  Sum_probs=231.8

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+||++.++|||.+..+++.++.......+.+..+.+...+++|++.+++.++   +++++|+++|+++++|.+.++++
T Consensus       110 ~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~---~~~a~vi~e~v~~~~G~~~~~~~  186 (375)
T PRK04260        110 KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVN---KNTAAVMLELVQGESGVLPADKD  186 (375)
T ss_pred             CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcC---CCeEEEEECCeECCCCCcCCCHH
Confidence            468999999999999999888875544455555545555567899999999886   47899999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      +|+++.++|+++|+++|+||+|+|+++.|..+.+...++.||++||||++++|+ |+|++++++++++.+....+..++.
T Consensus       187 ~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G~-~ig~~~~~~~~~~~~~~~~~~~t~~  265 (375)
T PRK04260        187 FVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFTLAKGLANGV-PVGAMLAKSSLGGAFGYGSHGSTFG  265 (375)
T ss_pred             HHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEEEecccccCCc-ceEEEEEcHHHHhhcCCCCCCCCCC
Confidence            999999999999999999999999998887666667788999999999999998 9999999999999887766778899


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      ++++.++++.++++.+..+++.+++++..+.+++.+.+.....+ .+..+++.|.++++.+..     +..++.+.|+++
T Consensus       266 ~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~g~~~~~~~~~-----~~~~~~~~l~~~  339 (375)
T PRK04260        266 GNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKE-TVTTVRGLGYMIGIETTA-----DLSQLVEAARDK  339 (375)
T ss_pred             cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCC-CeeEEeccceEEEEEecC-----cHHHHHHHHHhC
Confidence            99999999999999998778899999999999999998876653 455777899999998842     456899999999


Q ss_pred             CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      ||.+.+.+.+.+|++|+..++++++++++++|++++
T Consensus       340 Gi~v~~~~~~~lR~~~~~~~t~~~i~~~l~~l~~~~  375 (375)
T PRK04260        340 GLIVLTAGTNVIRLLPPLTLTKEEIEQGIAILSEVF  375 (375)
T ss_pred             CCEEecCCCCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence            999998877899999999999999999999998753

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=100.00  E-value=1.8e-36  Score=277.98  Aligned_cols=274  Identities=47%  Similarity=0.811  Sum_probs=237.3

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCC-----------CHHHHHHHHHhcCCcEEEEEEcccc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----------DITALEKIFKESGDQIAGFLFEPIQ   70 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------d~~~le~~i~~~~~~~~~v~v~~~~   70 (306)
                      +.+||++.++|||.+..++..++...+...+.+....+..+|++           |++.|++.++++++++++++++|++
T Consensus       122 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~  201 (413)
T cd00610         122 RKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQ  201 (413)
T ss_pred             CCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEcccc
Confidence            47899999999999999998887655556666666677889998           8999999998765689999999999


Q ss_pred             CCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhh
Q 021893           71 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC  150 (306)
Q Consensus        71 ~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~  150 (306)
                      +++|.+.++++++++|.++|++||+++|+||+|+|+++.|..+..+.+++.+|+.++||++++|+ |+|++++++++++.
T Consensus       202 ~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~t~sK~l~~g~-~~g~~~~~~~~~~~  280 (413)
T cd00610         202 GEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLGKGLGGGL-PLGAVLGREEIMDA  280 (413)
T ss_pred             CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCeEEEcccccCcc-ccEEEEEcHHHHHh
Confidence            99999888999999999999999999999999999988887766777888999999999999998 99999999999998


Q ss_pred             c--CCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC--
Q 021893          151 I--QPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA--  226 (306)
Q Consensus       151 ~--~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~--  226 (306)
                      +  ....+..+++.++++++++.++++.+.++++.++++++.+++++.|+++.... +.+..+++.|.++++.+.+..  
T Consensus       281 ~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~  359 (413)
T cd00610         281 FPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLRELAEKH-PLVGDVRGRGLMIGIELVKDRAT  359 (413)
T ss_pred             hccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhC-CcEEEeecCceEEEEEEecCCCc
Confidence            6  45566778889999999999999999887889999999999999999987643 245566788999999887521  


Q ss_pred             ---ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          227 ---LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       227 ---~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                         .......+++.|+++||.+.|.+.+.+|++++..++++++++++++|++++
T Consensus       360 ~~~~~~~~~~~~~~l~~~gv~v~~~~~~~lR~~~~~~~t~~~i~~~~~~l~~~l  413 (413)
T cd00610         360 KPPDKELAAKIIKAALERGLLLRPSGGNVIRLLPPLIITEEEIDEGLDALDEAL  413 (413)
T ss_pred             CCcchHHHHHHHHHHHHCCeEEeecCCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence               013567899999999999999877899999999999999999999998764

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=100.00  E-value=2.9e-36  Score=276.66  Aligned_cols=275  Identities=29%  Similarity=0.570  Sum_probs=233.8

Q ss_pred             cceEEEEecCCCCcccchhcccCCc-cccccCCCCCCCcccccC----CC------HHHHHHHHHh--cCCcEEEEEEcc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDF----GD------ITALEKIFKE--SGDQIAGFLFEP   68 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~d------~~~le~~i~~--~~~~~~~v~v~~   68 (306)
                      +.+||+|+++|||.+.+++++++.. .+...+.+..+++...++    ++      ++.|++++++  .++++++|++||
T Consensus       128 r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Ep  207 (425)
T PRK08088        128 RSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEP  207 (425)
T ss_pred             CCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECc
Confidence            5689999999999999999888742 244455555555433332    21      5678988862  346799999999


Q ss_pred             ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893           69 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM  148 (306)
Q Consensus        69 ~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~  148 (306)
                      +++++|.+.++++++++|.++|++||+++|+||+|+|+++.|..++++..++.+|+.+|||++++|+ |+||++++++++
T Consensus       208 i~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~-rig~v~~~~~~~  286 (425)
T PRK08088        208 VQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIAGGF-PLAGVTGRAEVM  286 (425)
T ss_pred             ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCEEEEeccccCCC-cceeeEecHHHH
Confidence            9999999999999999999999999999999999999999888776777788999999999999998 999999999999


Q ss_pred             hhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC--
Q 021893          149 LCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA--  226 (306)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~--  226 (306)
                      +.+....+..++.++++.++++.+.++.+..+++.+++++..+++++.|.++...+| .+..+++.|+++|+.+.++.  
T Consensus       287 ~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~-~~~~v~g~G~~~~l~l~~~~~~  365 (425)
T PRK08088        287 DAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHP-EIGDVRGLGAMIAIELFEDGDH  365 (425)
T ss_pred             hhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEeccceEEEEEEecCCCC
Confidence            999887888899999999999999999998888999999999999999999887774 56778888999999985321  


Q ss_pred             ---ChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          227 ---LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       227 ---~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                         .......+.+.|+++||.+.+..  .+.+|++|+..+++++|++++++|++++.
T Consensus       366 ~~p~~~~~~~l~~~~~~~Gv~~~~~~~~~~~iRl~~~~~~t~~ei~~~i~~l~~~l~  422 (425)
T PRK08088        366 SKPNAKLTAQIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIIAQCFD  422 (425)
T ss_pred             CCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHH
Confidence               12346789999999999887653  48999999999999999999999999987

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=100.00  E-value=1.1e-36  Score=270.77  Aligned_cols=220  Identities=47%  Similarity=0.843  Sum_probs=201.5

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHH----------HHHHHH-hcCCcEEEEEEcccc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITA----------LEKIFK-ESGDQIAGFLFEPIQ   70 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~----------le~~i~-~~~~~~~~v~v~~~~   70 (306)
                      |++||.|+++|||.+.+++++++++.++..+.|..+++..+|++++..          +++.+. .+++++++|++||++
T Consensus       108 r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~  187 (339)
T PF00202_consen  108 RRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPIQ  187 (339)
T ss_dssp             TTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSB
T ss_pred             CceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccc
Confidence            589999999999999999999999899999999999999999999877          444444 234789999999999


Q ss_pred             CCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhh
Q 021893           71 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC  150 (306)
Q Consensus        71 ~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~  150 (306)
                      +.+|.+.++++|+++|+++|++||+++|+||+++||||.|..|.++++++.||+++++|++++|+ ++|.+++++++++.
T Consensus       188 g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~gK~l~gG~-p~sav~~~~~i~~~  266 (339)
T PF00202_consen  188 GEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVTFGKGLGGGL-PISAVLGSEEIMEA  266 (339)
T ss_dssp             TTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEEEGGGGTTS-SEEEEEEEHHHHTT
T ss_pred             cccCccccccchhhehcccccccccceecccccccccccCCccceecccccCcccccccchhhhh-hcccccccchhhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999997 99999999999999


Q ss_pred             cCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893          151 IQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD  223 (306)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~  223 (306)
                      +.+..+.+||.+++++++++.++++.+.++++.+++++..++++++|+++...+ +.+..+++.|+++.+++.
T Consensus       267 ~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l~~~~-~~i~~vrg~Gl~~~ie~~  338 (339)
T PF00202_consen  267 FQPGSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLRELAARY-PLIGEVRGIGLMIGIELV  338 (339)
T ss_dssp             SCTTSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TTEEEEEEETTEEEEEES
T ss_pred             ccccccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEeeeCeEEEEEEE
Confidence            988889999999999999999999999999999999999999999999999988 589999999999999875

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=100.00  E-value=1.2e-35  Score=273.05  Aligned_cols=272  Identities=26%  Similarity=0.457  Sum_probs=223.3

Q ss_pred             cceEEEEecCCCCcccchhcccCCc--cccccCCCCC-----CCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDN--EAIRGFGPLL-----PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG   74 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G   74 (306)
                      +++||.++++|||.+..+++.++..  .....+.|..     +.+..+|++|++++++.++++++++++|++||+++++|
T Consensus       130 r~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~~G  209 (423)
T TIGR00713       130 RDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGNMG  209 (423)
T ss_pred             CCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCCCC
Confidence            5799999999999987777655431  1111222221     23567888999999999987666899999999999999


Q ss_pred             cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC-
Q 021893           75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP-  153 (306)
Q Consensus        75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~-  153 (306)
                      .+.++++++++|+++|++||+++|+||+|+|+ +.|..+..+.+++.||++++||++++|+ |+|++++++++++.+.. 
T Consensus       210 ~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~-r~g~~~~~~~~~~~pDi~t~sK~l~~G~-pig~v~~~~~i~~~~~~~  287 (423)
T TIGR00713       210 VVPPKPEFLAGLRALTEEYGSLLIFDEVMTGF-RVALGGAQEYFGVEPDLTTLGKIIGGGL-PVGAFGGRREIMERLAPE  287 (423)
T ss_pred             CcCCCHHHHHHHHHHHHHhCCEEEEEcccccc-ccCcchhHHHhCCCcchhhhhhhhcCCC-ceeeeeEHHHHHHhhCcC
Confidence            88888999999999999999999999999999 7776555667788999999999999998 99999999999998864 


Q ss_pred             --CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC----
Q 021893          154 --GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----  227 (306)
Q Consensus       154 --~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~----  227 (306)
                        ..+..++.+++++++++.++++.+.++++.+++++..+++++.|+++...+ +....+++.|.++.+.+.....    
T Consensus       288 ~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~g~~~~v~~~~~~~~~~~  366 (423)
T TIGR00713       288 GPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDT-GIPHTVNRVGSMFSLFFTEEEVTNYA  366 (423)
T ss_pred             CCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEeeccEEEEEEecCCCCChh
Confidence              346678899999999999999999887789999999999999999887766 3666778899999887763210    


Q ss_pred             ------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          228 ------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       228 ------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                            ......+++.|+++||++.+.+.+.+|++|+  ++++++++++++|++++.
T Consensus       367 ~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~l~~~--~t~~~i~~~~~~l~~~l~  421 (423)
T TIGR00713       367 DAKKSDTELFAKFFHEMLDKGVFLPPSQFEACFLSAA--HTEEDIENTIEAAEEVFA  421 (423)
T ss_pred             hhhcccHHHHHHHHHHHHHCCeEEecCCccceeeECC--CCHHHHHHHHHHHHHHHh
Confidence                  1123468889999999998765567899865  799999999999999987

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>PRK07046 aminotransferase; Validated

Probab=100.00  E-value=2.3e-35  Score=270.98  Aligned_cols=270  Identities=24%  Similarity=0.360  Sum_probs=218.2

Q ss_pred             cceEEEEecCCCCcccchhccc--CCccccccCCCC----CCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMS--CDNEAIRGFGPL----LPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGV   75 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~   75 (306)
                      |++||.|+|+|||++..++...  ++......+.+.    ...+..+||||++.+++.+..  +++++|++||+++++|.
T Consensus       156 r~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~--~~vAavi~EPi~g~~G~  233 (453)
T PRK07046        156 RPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFNDLAALEAALAD--GDVAAVLAEPAMTNIGM  233 (453)
T ss_pred             CCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCCCHHHHHHHhCC--CCeEEEEECCCCCCCCC
Confidence            5799999999999976665432  211111222111    234588899999999999953  67999999999999999


Q ss_pred             ccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC--
Q 021893           76 IIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP--  153 (306)
Q Consensus        76 ~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~--  153 (306)
                      +.++++||++++++|++||+++|+||+++ | +.|..-....+++.||+++++|+++||+ |+|.+++++++++.+.+  
T Consensus       234 ~~p~~~fl~~lr~lc~~~g~llI~DEV~t-f-r~g~Gg~~~~~gv~PDi~t~gK~lggG~-Pi~av~g~~~i~~~~~~~~  310 (453)
T PRK07046        234 VLPEPGFHEALRELTRRYGTLLVIDETHT-I-SSGPGGYTRAHGLEPDFLVVGKPIAGGV-PCAVYGFSAELAERAQAAK  310 (453)
T ss_pred             cCCCHHHHHHHHHHHHHhCCEEEEEcccc-C-ccCCcchhHHhCCCccceeehhhhcCCC-cceeeeehHHHHHHHhhcc
Confidence            99999999999999999999999999998 3 2232222456799999999999999998 99999999999988752  


Q ss_pred             -------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC
Q 021893          154 -------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA  226 (306)
Q Consensus       154 -------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~  226 (306)
                             ..+.+||.+|+++++++.++++.+.++++.++++++.++++++|+++...+ +....+++.|.++.+.+....
T Consensus       311 ~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~-~~~~~v~g~G~~~~i~~~~~~  389 (453)
T PRK07046        311 ASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARH-GLPWHVTRVGARVEFQFAPTP  389 (453)
T ss_pred             ccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCcEEEEEEeCCC
Confidence                   136679999999999999999999888899999999999999999988776 366789999999888764321


Q ss_pred             C-----------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          227 L-----------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       227 ~-----------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .           ......+...|+++||++.+. .+.++++|+  ++++||++++++++++++ ++
T Consensus       390 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~-~~~~~~~p~--~t~~did~~~~~~~~~l~-~~  451 (453)
T PRK07046        390 PRNGAEAAAALDPELEAALHLYLLNRGVLITPF-HNMMLVCPA--TTAADVDRLVAAFDACLG-EL  451 (453)
T ss_pred             CCCHHHHhcccCHHHHHHHHHHHHHCCCEEecc-cCcEEEeCC--CCHHHHHHHHHHHHHHHH-HH
Confidence            0           112346788899999999885 457888864  899999999999999988 64

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=100.00  E-value=3.5e-35  Score=269.27  Aligned_cols=274  Identities=26%  Similarity=0.438  Sum_probs=227.5

Q ss_pred             cceEEEEecCCCCcccchhcccCCccc--cccCCCC-----CCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEA--IRGFGPL-----LPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG   74 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G   74 (306)
                      +++||+|.++|||.+.++.+.++....  ...+.+.     .+.+..++|+|++.+++.++.+++++++|++||+++++|
T Consensus       132 ~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G  211 (426)
T PRK00062        132 RDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMG  211 (426)
T ss_pred             CCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCC
Confidence            578999999999999777766442211  1111111     124577889999999999987667899999999999999


Q ss_pred             cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC-
Q 021893           75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP-  153 (306)
Q Consensus        75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~-  153 (306)
                      .+.+++++|++|+++|++||+++|+||+|+|+ +.|..+..+.+++.||+.++||++++|+ |+|++++++++++.+.. 
T Consensus       212 ~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~~pDi~~~gK~l~~G~-p~ga~~~~~~i~~~~~~~  289 (426)
T PRK00062        212 VVPPKPGFLEGLRELCDEHGALLIFDEVMTGF-RVALGGAQGYYGVTPDLTTLGKIIGGGL-PVGAFGGRREIMEQLAPL  289 (426)
T ss_pred             CcCCCHHHHHHHHHHHHHcCCEEEEeechhcc-ccCCccHHHHhCCCcchHhhhhHhhCCC-cceeeeEHHHHHHhhccC
Confidence            99999999999999999999999999999999 6776666677888999999999999998 99999999999998853 


Q ss_pred             --CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC----
Q 021893          154 --GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL----  227 (306)
Q Consensus       154 --~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~----  227 (306)
                        ..+..+++++++.++++.++++.+.++++.+++++..++++++|+++...++ .+..+++.|.++.+.+.++..    
T Consensus       290 ~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~vrg~G~~~~i~l~~~~~~~~~  368 (426)
T PRK00062        290 GPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAG-IPLTVNRVGSMFGLFFTDEPVTNYA  368 (426)
T ss_pred             CCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC-CceEEEEecceEEEEEecCCCcchh
Confidence              2455678899999999999999998878999999999999999998877663 677889999999998874310    


Q ss_pred             ------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          228 ------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       228 ------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                            ......+.+.|+++||++.+.+.+.++++  ..++++++++++++|++++. .+
T Consensus       369 ~~~~~~~~~~~~i~~~l~~~Gv~v~~~~~~~~~~~--~~~t~~ei~~~~~~l~~~l~-~~  425 (426)
T PRK00062        369 DAKKSDTERFARFFHAMLDEGVYLAPSQFEAGFVS--AAHTDEDIEKTLEAARKAFA-AL  425 (426)
T ss_pred             hhccccHHHHHHHHHHHHHCCeEeecCCcCceeee--ccCCHHHHHHHHHHHHHHHH-hh
Confidence                  11245789999999999998765677775  78999999999999999987 53

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=100.00  E-value=3.3e-34  Score=260.10  Aligned_cols=265  Identities=40%  Similarity=0.727  Sum_probs=224.7

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+|+++.++|||....+...+........+.+...++.+++++|++.+++.++   +++++|+++|+++++|...++.+
T Consensus       115 ~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~p~~~~~g~~~~~~~  191 (379)
T TIGR00707       115 KKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAID---DETAAVIVEPIQGEGGVNPASAE  191 (379)
T ss_pred             CCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhh---hCeeEEEEEccccCCCCccCCHH
Confidence            479999999999999888877776544445556666777888999999999997   46899999999988887777999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      ++++|.++|++||+++|+||+|++|++.|..+.....+..+|++++||++++|+ |+||+++++++++.+.......+++
T Consensus       192 ~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~t~sK~~~~G~-riG~~~~~~~~~~~~~~~~~~~~~~  270 (379)
T TIGR00707       192 FLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDIITLAKGLGGGV-PIGATLAKEEVAEAFTPGDHGSTFG  270 (379)
T ss_pred             HHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEEEEcccccCCc-ccEEEEEcHHHHhhhcCCCCCCCCC
Confidence            999999999999999999999999988776554455677889999999999999 9999999999999988766667788


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      .++++++++.++++.+...++.++++++++.++++|++.....+ . ...+..|.++++.+++     ...++.+.|.++
T Consensus       271 ~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~-~~~~~~g~~~~~~~~~-----~~~~~~~~l~~~  343 (379)
T TIGR00707       271 GNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGKNYP-N-KEVRGKGLMLGIELEA-----PCKDIVKKALEK  343 (379)
T ss_pred             CCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhCC-C-CccccCceEEEEEecC-----cHHHHHHHHHHC
Confidence            89999999999999887667889999999999999998765432 2 2344578888887763     257899999999


Q ss_pred             CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      ||.+.|.+.+++|++++...+++++++++++|++++
T Consensus       344 Gv~v~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~  379 (379)
T TIGR00707       344 GLLVNCAGPKVLRFLPPLIITKEEIDEAVSALEEAI  379 (379)
T ss_pred             CcEEeeCCCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence            999999877899999998899999999999998763

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=4.5e-31  Score=222.74  Aligned_cols=266  Identities=23%  Similarity=0.388  Sum_probs=223.7

Q ss_pred             ceEEEEecCCCCcccchhcccCCcccc----ccCCCCCCCcccccCC--------------CHHHHHHHHHhcC---CcE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAI----RGFGPLLPGHLKVDFG--------------DITALEKIFKESG---DQI   61 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--------------d~~~le~~i~~~~---~~~   61 (306)
                      -.|++|.|+|||+++++++.+.+....    ..|.|..-.+....|+              -++++|++|.++.   ..+
T Consensus       193 lsvlsF~gaFHGR~~g~lstT~SKpIHKldiPaFdWPiA~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k~~pV  272 (484)
T KOG1405|consen  193 LSVLSFKGAFHGRTFGSLSTTHSKPIHKLDIPAFDWPIAPFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRKKKKPV  272 (484)
T ss_pred             eeeeeeccccccccccccccccCccccccCCCCCCCCCCCCccccCChhhhhhhhhhhhhhHHHHHHHHHHHHhhcCCCe
Confidence            469999999999999999999854332    1121111122222222              2788999999865   468


Q ss_pred             EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC--CCcEEEeccccc-CCcccc
Q 021893           62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV--RPDMVILGKALG-GGVIPV  138 (306)
Q Consensus        62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~--~~d~~s~sK~~~-~G~~~~  138 (306)
                      ++++|||+++.+|.-..+++|++.|+++|++||+.+|+||+|+|.|.+|..++.++|++  -||+++|||-|. ||+   
T Consensus       273 aaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFSKK~q~gGf---  349 (484)
T KOG1405|consen  273 AAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFSKKFQTGGF---  349 (484)
T ss_pred             EEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceehhhhhhcCcc---
Confidence            99999999999999999999999999999999999999999999999999999999987  569999999887 676   


Q ss_pred             eeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893          139 SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN  218 (306)
Q Consensus       139 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~  218 (306)
                        .. .++++ --.+..+.+||.+.+.-...+.+.++.+.++++....+..++.|..+|.++...+|+.+...++.|.++
T Consensus       350 --fh-~~~fr-pn~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~  425 (484)
T KOG1405|consen  350 --FH-DEEFR-PNEPYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFI  425 (484)
T ss_pred             --cc-CcccC-CCchHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEE
Confidence              32 22221 112345788999999988899999999999999999999999999999999999998889999999999


Q ss_pred             EEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          219 AVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       219 ~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .+++++   +..-..|+..++-+|+.++.++...||+.|++..++...+-+++++++.+.
T Consensus       426 a~d~ps---~~~Rdk~i~~~~~nGv~~GGCg~~siRfRPsLvf~~~Ha~i~l~~~~k~l~  482 (484)
T KOG1405|consen  426 AWDCPS---GSIRDKLILIARLNGVNLGGCGDKSIRFRPSLVFRKHHADIFLDIFDKILA  482 (484)
T ss_pred             EEeCCC---hHHHHHHHHHHHHcCceecccccceeeeccceeehhhhHHHHHHHHHHHhc
Confidence            999996   455668999999999999999999999999999999999999999999887

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=99.97  E-value=3.6e-29  Score=229.54  Aligned_cols=264  Identities=23%  Similarity=0.331  Sum_probs=200.4

Q ss_pred             cceEEEE-ecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCCh
Q 021893            2 QAIIVSC-CGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPD   80 (306)
Q Consensus         2 ~~~ii~~-~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~   80 (306)
                      |++|+.+ .++|||........+...  .....+....+..++|+|+++|+++++++++++++|++||++++    .+++
T Consensus       130 r~~i~~~~~~~~h~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavi~Epv~g~----~~~~  203 (431)
T PRK06209        130 RDLVARCADHPFFSTDDWFIGTTPMS--AGIPASVSALTVTFRYNDIASLEALFEDHPGRIACVILEPATAD----EPQD  203 (431)
T ss_pred             CCeEEEeccCccccccccccccCCCC--CCCChhHhccccccCCCCHHHHHHHHHhCCCCEEEEEEccccCC----CCCH
Confidence            5688888 788887432221111100  00000112335678899999999999876678999999999865    6789


Q ss_pred             hHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhh--cCC-----
Q 021893           81 GYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC--IQP-----  153 (306)
Q Consensus        81 ~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~--~~~-----  153 (306)
                      ++|++|+++|++||++||+||+++|+++.+... ...+++.||++++||++++|+ ++|++++++++++.  +..     
T Consensus       204 ~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~-~~~~gv~PDi~t~gK~lggG~-p~~av~~~~~i~~~~~~~~~~~~~  281 (431)
T PRK06209        204 GFLHEVRRLCHENGALFILDEMITGFRWHMRGA-QKLYGIVPDLSCFGKALGNGF-AVSALAGKREYMELGGLEHTDRER  281 (431)
T ss_pred             HHHHHHHHHHHHcCCEEEEEcccccCCcCcchh-hHHhCCCcceeeehhhhcCCc-ccEEEEEHHHHHhhhcccccCCCC
Confidence            999999999999999999999999986543222 335789999999999999998 99999999999886  311     


Q ss_pred             -CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-----C
Q 021893          154 -GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----L  227 (306)
Q Consensus       154 -~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-----~  227 (306)
                       ..++.++.+|+++++++.++++.+.++++.++++++.+++++.|+++...++ ....+++.|.++.+.+....     .
T Consensus       282 ~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~-~~~~vr~~G~~~~~~~~~~~~~~~~~  360 (431)
T PRK06209        282 VFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEHG-LQDHVRVSGRPCCLTYSTLDGNGQPS  360 (431)
T ss_pred             ceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeecceEEEEEecCCcccCCc
Confidence             1257788899999999999999999888999999999999999999877663 55567777777666554211     0


Q ss_pred             hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          228 PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       228 ~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      ......+.+.|+++|+++.|     ++++  ..+|++||++++++|+++++ ++.
T Consensus       361 ~~~~~~~~~~l~~~Gi~~p~-----l~is--~~ht~~dId~~l~~l~~~l~-~~~  407 (431)
T PRK06209        361 QAFRTLFLQETIRRGVLMPS-----LVVS--YAHGDADIERTIDAVHGALG-VYR  407 (431)
T ss_pred             HHHHHHHHHHHHHCCccccc-----cccc--ccCCHHHHHHHHHHHHHHHH-HHH
Confidence            11133678899999998732     4444  78899999999999999999 773

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.96  E-value=8.1e-28  Score=217.28  Aligned_cols=264  Identities=19%  Similarity=0.232  Sum_probs=203.7

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------ccccc--------CCCHHHHHHHHHhcCCcEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVD--------FGDITALEKIFKESGDQIAG   63 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~--------~~d~~~le~~i~~~~~~~~~   63 (306)
                      +.|++..|+-+|-..+.+++.++.+..-...|.|+.           ++.++        ..|++.++++++   ++|++
T Consensus        90 ~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~---~ktk~  166 (393)
T COG0436          90 EEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAIT---PKTKA  166 (393)
T ss_pred             CeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcC---ccceE
Confidence            459999999999999999998876655555566655           23333        127999999999   58999


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-cccc-ccCC---CCCcEEEeccccc-CCccc
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLAS-DWEE---VRPDMVILGKALG-GGVIP  137 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~-~~~~---~~~d~~s~sK~~~-~G~~~  137 (306)
                      ++++.++|+||.+ .+++.|++|.++|++||++||+||+|.++.+.|. ..+. +..+   ....+-||||.++ +|| |
T Consensus       167 i~ln~P~NPTGav-~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGw-R  244 (393)
T COG0436         167 IILNSPNNPTGAV-YSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGW-R  244 (393)
T ss_pred             EEEeCCCCCcCcC-CCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEeccccccccccc-c
Confidence            9999999999965 5899999999999999999999999999877774 2222 2222   1223448999999 999 9


Q ss_pred             ceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-
Q 021893          138 VSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV-  211 (306)
Q Consensus       138 ~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-  211 (306)
                      +||++++ +++++.+........++.+.+.+.++.++|+.-.+    +...+.++++++.+.+.|++..    ++.... 
T Consensus       245 vG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~----g~~~~~~  320 (393)
T COG0436         245 IGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIG----GLSVVKP  320 (393)
T ss_pred             eeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcC----CeeeccC
Confidence            9999998 88888877666677778999999999999985422    2233456677777777777663    233344 


Q ss_pred             EEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC-------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          212 RGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       212 ~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~-------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +..+.++|..++.   ..++.+|+..|+++ ||.+.|+       +.+++|++  +..+.++++++++++.++++ .+
T Consensus       321 p~Ga~Y~~~~i~~---~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis--~~~~~~~l~~a~~rl~~~~~-~~  392 (393)
T COG0436         321 PEGAFYLFPKIPE---LLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLS--LATSEETLEEALRRLARFLA-EY  392 (393)
T ss_pred             CCeeEEEEeecCC---CCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEE--EecCHHHHHHHHHHHHHHHH-hc
Confidence            5577777877774   25788999999877 8999985       35799999  77778999999999999887 43

>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]

Probab=99.96  E-value=1.9e-27  Score=197.12  Aligned_cols=278  Identities=29%  Similarity=0.463  Sum_probs=229.3

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCc-ccccCCC--------------------HHHHHHHHHh---c
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH-LKVDFGD--------------------ITALEKIFKE---S   57 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d--------------------~~~le~~i~~---~   57 (306)
                      +..+|++++.|||+....+-+|........-. --|++ -..|.+|                    .+.+++.+++   .
T Consensus       128 hqDvItldHAYHGHl~s~mE~SPYKF~~g~~v-~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~  206 (452)
T KOG1403|consen  128 HQDVITLDHAYHGHLQSVMEVSPYKFNQGGGV-AKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAK  206 (452)
T ss_pred             cCceEEEechhccceeeeeeccceeccCCCCc-CCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhc
Confidence            46799999999999988887776332221111 11221 1222221                    4567777775   2


Q ss_pred             CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccccCCCCCcEEEecccccCCcc
Q 021893           58 GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVRPDMVILGKALGGGVI  136 (306)
Q Consensus        58 ~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~~~~~~~d~~s~sK~~~~G~~  136 (306)
                      +..+++++-|..++-+|.+.|++.+.+.+.+..|.+|=+.|.||+|.||||.|. .|+++.+++.||+++.+|.+|.|. 
T Consensus       207 g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmGNGh-  285 (452)
T KOG1403|consen  207 GQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMGNGH-  285 (452)
T ss_pred             CCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCCCCC-
Confidence            356899999999999999999999999999999999999999999999999996 677888999999999999999999 


Q ss_pred             cceeeEeCHHHHhhcCC--CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEe
Q 021893          137 PVSAVLADKEVMLCIQP--GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR  214 (306)
Q Consensus       137 ~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~  214 (306)
                      |++.++.++++.+.+..  ....++|.+|+++++++++.|+.+++++++++.++.+..|...|.++...+ +.+-++++.
T Consensus       286 PVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh-~~IGDvRGv  364 (452)
T KOG1403|consen  286 PVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKH-ECIGDVRGV  364 (452)
T ss_pred             eeeEEeccHHHHHHhccccceehhccCCCchhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhc-cceeccccc
Confidence            99999999999998864  356789999999999999999999999999999999999999999998887 488999999


Q ss_pred             eeEEEEEEecCC-----ChhhHHHHHHHHHHC-CceeccC--CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          215 GLFNAVEFDKTA-----LPVSAYDICLKMKER-GILAKPT--HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       215 g~~~~i~~~~~~-----~~~~~~~~~~~l~~~-Gi~~~~~--~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      |+++.+++..+.     ....+..+...|++. +|+++..  +.+.+.|-|+.+.+++++++++..|+++|. .+.+
T Consensus       365 GLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGPh~NilKiKPPmCFneena~e~v~~ld~iLT-~mee  440 (452)
T KOG1403|consen  365 GLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGPHRNILKIKPPMCFNEENADEFVLGLDEILT-VMEE  440 (452)
T ss_pred             eEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCCCCceeecCCCcccChhhHHHHHHHHHHHHH-HHHH
Confidence            999999988654     122344567777766 7888864  467899999999999999999999999987 6543

>PLN02822 serine palmitoyltransferase

Probab=99.95  E-value=3.4e-26  Score=212.23  Aligned_cols=252  Identities=21%  Similarity=0.273  Sum_probs=192.5

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcC------CcE-EEEEEccccCCCCc
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG------DQI-AGFLFEPIQGEAGV   75 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~------~~~-~~v~v~~~~~~~G~   75 (306)
                      .++|++..+||+.+..++.+++            ..+..++|||++.++..+++..      +++ ++|++|++++++|.
T Consensus       193 gd~Ii~d~~~H~s~~~~~~ls~------------~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~  260 (481)
T PLN02822        193 GDIIVADEGVHWGIQNGLYLSR------------STIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQ  260 (481)
T ss_pred             CCEEEEeCCccHHHHHHHHHcC------------CeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCC
Confidence            4577788889887755555544            2346789999999998887531      234 89999999999999


Q ss_pred             ccCChhHHHHHHHHHHHcCCEEEEehhhh-c-ccccccccccccCCC---CCcEE--Eeccccc--CCcccceeeEeCHH
Q 021893           76 IIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEEV---RPDMV--ILGKALG--GGVIPVSAVLADKE  146 (306)
Q Consensus        76 ~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~~~~~~---~~d~~--s~sK~~~--~G~~~~g~~~~~~~  146 (306)
                      +.+    +++|+++|++||++||+||+|+ | +|+.|.+. .+++++   .+|++  |+||+++  ||+     ++++++
T Consensus       261 i~~----L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~-~e~~~v~~~~~dii~~s~sKalg~~GG~-----i~g~~~  330 (481)
T PLN02822        261 IAP----LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGL-SEHFGVPIEKIDIITAAMGHALATEGGF-----CTGSAR  330 (481)
T ss_pred             ccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCCh-HHHcCCCCCCCeEEEecchhhhhhCCeE-----EEcCHH
Confidence            998    9999999999999999999998 3 56666654 566665   56776  4889998  555     899999


Q ss_pred             HHhhcCCCCccCCCCCC--HHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893          147 VMLCIQPGEHGSTFGGN--PLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD  223 (306)
Q Consensus       147 ~~~~~~~~~~~~~~~~~--~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~  223 (306)
                      +++.++...+..+|+++  +..+.++.++++.+.. ++..++++++++++++.|++..    +........+.++++.+.
T Consensus       331 ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~----g~~~~~~~~spi~~l~l~  406 (481)
T PLN02822        331 VVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIP----GLSIGSNTLSPIVFLHLE  406 (481)
T ss_pred             HHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC----CcccCCCCCCCEEEEEeC
Confidence            99988876677777665  6677888889988765 5688899999999999998752    122233345677777775


Q ss_pred             cC-C----ChhhHHHHHHHHH-HCCceeccC---------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          224 KT-A----LPVSAYDICLKMK-ERGILAKPT---------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       224 ~~-~----~~~~~~~~~~~l~-~~Gi~~~~~---------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +. .    ......++++.|+ ++||++.+.         .+..+|++++..++++||++++++|++++. .+
T Consensus       407 ~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~-~~  478 (481)
T PLN02822        407 KSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAA-SV  478 (481)
T ss_pred             CCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHH-HH
Confidence            31 0    0122468999998 779999964         135799998899999999999999999987 54

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.93  E-value=1.1e-24  Score=199.41  Aligned_cols=247  Identities=21%  Similarity=0.270  Sum_probs=184.7

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhH
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      ++|++...||+.+......++.            .+..++++|++.+++.++... +++++|+++++++++|.+.+    
T Consensus       132 ~~I~~~~~~H~s~~~~~~~~g~------------~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~----  195 (406)
T PRK13393        132 CVILSDELNHASMIEGIRHSRA------------EKRIFRHNDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAP----  195 (406)
T ss_pred             CEEEEccchhHHHHHHHHHcCC------------eEEEeCCCCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhC----
Confidence            5778888888877655443321            135678899999999997642 36789999999999999998    


Q ss_pred             HHHHHHHHHHcCCEEEEehhhh-cc-cccccccccccCCCC--CcEE--Eeccccc--CCcccceeeEeCHHHHhhcCCC
Q 021893           83 LKAVRDLCSKYNILMIADEIQS-GL-ARSGRMLASDWEEVR--PDMV--ILGKALG--GGVIPVSAVLADKEVMLCIQPG  154 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~-g~-~~~g~~~~~~~~~~~--~d~~--s~sK~~~--~G~~~~g~~~~~~~~~~~~~~~  154 (306)
                      +++|.++|++||+++|+||+|+ |+ |+.|..+ ....++.  +|++  ++||+++  ||+     +++++++++.+...
T Consensus       196 l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~-~~~~~~~~~~~i~~~tlsKa~g~~GG~-----~~~~~~~~~~l~~~  269 (406)
T PRK13393        196 IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGI-AEREGLADRLTIIEGTLAKAFGVMGGY-----ITGSAALCDFIRSF  269 (406)
T ss_pred             HHHHHHHHHHcCCEEEEECCccccccCCCCCch-hhhcCCCCCCeEEEEeCchhhcccCce-----eeCCHHHHHHHHHh
Confidence            9999999999999999999998 65 7777655 3444443  4665  9999998  554     88888888877654


Q ss_pred             Ccc--CCCCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhH
Q 021893          155 EHG--STFGGNPLASAVAIASLDVIRDEK-LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSA  231 (306)
Q Consensus       155 ~~~--~~~~~~~~~~~aa~~al~~~~~~~-~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~  231 (306)
                      ...  .+.+.++.+++++.++++.+.+.. ...+++++.+++++.|++....      ..++.+.++.+.+.+   ....
T Consensus       270 ~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~------~~~~~~~i~~v~~~~---~~~~  340 (406)
T PRK13393        270 ASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKAGIP------HLPNPSHIVPVMVGD---PVLC  340 (406)
T ss_pred             CcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcCCC------cCCCCCCeEEEEeCC---HHHH
Confidence            332  244567788888999998876532 2456678888888888775211      224566677765542   2356


Q ss_pred             HHHHHHHHH-CCceeccC-------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          232 YDICLKMKE-RGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       232 ~~~~~~l~~-~Gi~~~~~-------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      .++.+.|++ +||++.+.       +.+.+|++|+..++++|++.++++|++++. ++.
T Consensus       341 ~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~-~~~  398 (406)
T PRK13393        341 KQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWA-RLG  398 (406)
T ss_pred             HHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH-hcC
Confidence            789999988 59998742       347899999999999999999999999988 653

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=99.93  E-value=1.1e-24  Score=193.63  Aligned_cols=255  Identities=21%  Similarity=0.294  Sum_probs=195.5

Q ss_pred             ceEEEEecCCCCcccchhcccCCccc----cccCCCCCCC-------cccccCCCHHHHHHHHHhcC---CcEEEEEEcc
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEA----IRGFGPLLPG-------HLKVDFGDITALEKIFKESG---DQIAGFLFEP   68 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~----~~~~~~~~~~-------~~~~~~~d~~~le~~i~~~~---~~~~~v~v~~   68 (306)
                      ...++|+.||.+......++..+...    +.+.++...+       +..++|||++.||++|+++.   .+.++|+++.
T Consensus       100 e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~Ivteg  179 (388)
T COG0156         100 EAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKHNDLDHLEALLEEARENGARRKLIVTEG  179 (388)
T ss_pred             CcEEEEcccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecCCCHHHHHHHHHhhhccCCCceEEEEec
Confidence            36789999999988777777764322    2333333333       58899999999999999732   1478999999


Q ss_pred             ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c-ccccccccccccCCCCC---c--EEEeccccc--CCcccce
Q 021893           69 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEEVRP---D--MVILGKALG--GGVIPVS  139 (306)
Q Consensus        69 ~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~~~~~~~~---d--~~s~sK~~~--~G~~~~g  139 (306)
                      +++|.|.+.|    |++|.+++++|+.+|++||+|+ | +|..|.++ ++++++.+   |  +.|+||++|  ||+    
T Consensus       180 VfSMdGdiAp----L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~-~e~~g~~~~~vdi~~gTlsKAlGs~Gg~----  250 (388)
T COG0156         180 VFSMDGDIAP----LPELVELAEKYGALLYVDEAHAVGVLGPNGRGL-AEHFGLEPEEVDIIVGTLGKALGSSGGY----  250 (388)
T ss_pred             cccCCCCcCC----HHHHHHHHHHhCcEEEEEccccccccCCCCccH-HHHhCCCCccceEEEEEchhhhcccCce----
Confidence            9999999999    9999999999999999999998 5 56677776 55666542   3  449999999  676    


Q ss_pred             eeEeCHHHHhhcCCCCccCCC--CCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893          140 AVLADKEVMLCIQPGEHGSTF--GGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL  216 (306)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~  216 (306)
                       +.+++.+.+.+........|  +.+|...+++.++++.+.+ .+.+++++++...++..+......      ..+....
T Consensus       251 -v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~~~~------~~~s~s~  323 (388)
T COG0156         251 -IAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKALGLV------LLPSESP  323 (388)
T ss_pred             -eeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCc------cCCCCCC
Confidence             89999998888765433333  4566777788899999986 456788888888888555554311      2344455


Q ss_pred             EEEEEEecCCChhhHHHHHHHHHHCCceecc-------CCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          217 FNAVEFDKTALPVSAYDICLKMKERGILAKP-------THDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       217 ~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~-------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      ++++.+.+   +....++...|+++||++.+       .+...+|++++..+|++||+.++++|.++
T Consensus       324 I~pv~~gd---~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~  387 (388)
T COG0156         324 IIPVILGD---EERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV  387 (388)
T ss_pred             eeeeEeCC---HHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence            56666664   46688999999999999884       24678999999999999999999998764

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=99.93  E-value=3.1e-24  Score=196.20  Aligned_cols=246  Identities=21%  Similarity=0.291  Sum_probs=178.3

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhH
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+|+....||+........++.            .+..++++|+++++++++... +++++|+++++++++|.+.+    
T Consensus       132 ~~v~~~~~~h~s~~~~~~~~g~------------~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~----  195 (402)
T TIGR01821       132 CVIFSDELNHASMIEGIRHSGA------------EKFIFRHNDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAP----  195 (402)
T ss_pred             CEEEEcchHhHHHHHHHHHcCC------------eEEEECCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC----
Confidence            3555556677655443332221            123467889999999998643 36899999999999999988    


Q ss_pred             HHHHHHHHHHcCCEEEEehhhh-c-ccccccccccccCCC--CCcEE--Eeccccc--CCcccceeeEeCHHHHhhcCCC
Q 021893           83 LKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEEV--RPDMV--ILGKALG--GGVIPVSAVLADKEVMLCIQPG  154 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~~~~~~--~~d~~--s~sK~~~--~G~~~~g~~~~~~~~~~~~~~~  154 (306)
                      +++|.++|++||++||+||+|+ | ++..|... ....++  .+|++  ++||+++  ||+     +++++++++.+...
T Consensus       196 l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~-~~~~~~~~~~div~~t~sKa~g~~GG~-----i~~~~~~~~~l~~~  269 (402)
T TIGR01821       196 IEEICDLADKYGALTYLDEVHAVGLYGPRGGGI-AERDGLMHRIDIIEGTLAKAFGVVGGY-----IAASRKLIDAIRSY  269 (402)
T ss_pred             HHHHHHHHHHcCCEEEEeCcccccccCCCCCcc-chhccCCCCCeEEEEechhhhccCCce-----eecCHHHHHHHHHh
Confidence            9999999999999999999998 5 34555443 233343  35665  9999998  554     88899988877543


Q ss_pred             Cc--cCCCCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhH
Q 021893          155 EH--GSTFGGNPLASAVAIASLDVIRDE-KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSA  231 (306)
Q Consensus       155 ~~--~~~~~~~~~~~~aa~~al~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~  231 (306)
                      ..  ..+...++.+++++.++++.+.+. ...++.+++.+++++.|++++..      .....+.++++.+..   ....
T Consensus       270 ~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~------~~~~~~~i~~i~~~~---~~~a  340 (402)
T TIGR01821       270 APGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEALGIP------VIPNPSHIVPVIIGD---AALC  340 (402)
T ss_pred             CcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHcCCC------cCCCCCCEEEEEeCC---HHHH
Confidence            22  223456788889999999988754 34566778888999888876311      122345666665542   2346


Q ss_pred             HHHHHHHHH-CCceeccC-------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          232 YDICLKMKE-RGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       232 ~~~~~~l~~-~Gi~~~~~-------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .++++.|++ +||++.+.       +..++|++++..++++|++++++.|+++++ ++
T Consensus       341 ~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~-~~  397 (402)
T TIGR01821       341 KKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWD-RL  397 (402)
T ss_pred             HHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHH-Hc
Confidence            789999875 59998752       346899999999999999999999999988 65

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>PRK07324 transaminase; Validated

Probab=99.93  E-value=3.3e-24  Score=193.91  Aligned_cols=266  Identities=17%  Similarity=0.222  Sum_probs=177.8

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v   64 (306)
                      .+|++..|+.+|...+..++..+.+..-...|.++.           ++.+|.       .|++++++.++   ++++++
T Consensus        81 ~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~---~~~kli  157 (373)
T PRK07324         81 ENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVR---PNTKLI  157 (373)
T ss_pred             hhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCC---CCCcEE
Confidence            367888888888776666665543322222233322           233332       37888888776   578899


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCCcEEEeccccc-CCcccceeeE
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDMVILGKALG-GGVIPVSAVL  142 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~d~~s~sK~~~-~G~~~~g~~~  142 (306)
                      +++.++|++|.+ .+++.+++|.++|++||+++|+||+|.++...+...+ .+..+....+.|+||.++ +|+ |+||++
T Consensus       158 ~i~~p~NPtG~~-~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~-RiG~i~  235 (373)
T PRK07324        158 CINNANNPTGAL-MDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGI-RVGWIA  235 (373)
T ss_pred             EEeCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccc-eeEEEe
Confidence            999999999965 5799999999999999999999999998755442211 122222334559999999 899 999999


Q ss_pred             eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE
Q 021893          143 ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF  222 (306)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~  222 (306)
                      +++++++.+.......+++.+.+.+.++..+++..  +.+.+++++..+..++.+.+.....+......+..|.+.++.+
T Consensus       236 ~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~--~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~  313 (373)
T PRK07324        236 ANEEVIDILRKYRDYTMICAGVFDDMLASLALEHR--DAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKL  313 (373)
T ss_pred             cCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEe
Confidence            99999988877655556677778887777776532  2222333222222223333322222222223334455566666


Q ss_pred             ecCCChhhHHHHHHHHH-HCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          223 DKTALPVSAYDICLKMK-ERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       223 ~~~~~~~~~~~~~~~l~-~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +.   ..+..++++.|+ ++||.+.|+.    ++++|++  +..+++.+++++++|+++++ ++
T Consensus       314 ~~---~~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis--~~~~~~~l~~~l~rl~~~l~-~~  371 (373)
T PRK07324        314 DV---DMPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIG--YCCDTETLKKGLKKLSEFLR-EF  371 (373)
T ss_pred             CC---CCCHHHHHHHHHHhcCEEEECccccCCCCeEEEE--ecCCHHHHHHHHHHHHHHHH-hc
Confidence            53   346778999876 6699999873    5899999  45678999999999999988 54

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=99.92  E-value=5.7e-24  Score=182.76  Aligned_cols=264  Identities=17%  Similarity=0.215  Sum_probs=190.9

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCCc-----------ccccC--------CCHHHHHHHHHhcCCcEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH-----------LKVDF--------GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~--------~d~~~le~~i~~~~~~~~~v   64 (306)
                      .|++..|--.|-..+....+.+.+..-...|.|+.+           +..|.        -|+++||+.+.+  ++++++
T Consensus        85 ~i~~~p~VVpgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~--~~vkl~  162 (388)
T COG1168          85 WIVFVPGVVPGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD--ERVKLF  162 (388)
T ss_pred             eEEEcCcchHhHHHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhc--CCccEE
Confidence            344555555566666666777666666666777662           11111        189999999996  567899


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccc---cC--CCCCcEEEeccccc-CCccc
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASD---WE--EVRPDMVILGKALG-GGVIP  137 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~---~~--~~~~d~~s~sK~~~-~G~~~  137 (306)
                      +++++||++| ++++++.|.+|.++|.+||+++|+||+|+++...|. .+++.   ..  ....-+.+-||+|. +|+ .
T Consensus       163 iLCnPHNP~G-rvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL-~  240 (388)
T COG1168         163 ILCNPHNPTG-RVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGL-K  240 (388)
T ss_pred             EEeCCCCCCC-ccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhh-h
Confidence            9999999998 678999999999999999999999999999866663 22211   11  11112335679999 899 9


Q ss_pred             ceeeEe-CHHHHhhcC-CCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE
Q 021893          138 VSAVLA-DKEVMLCIQ-PGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG  213 (306)
Q Consensus       138 ~g~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~  213 (306)
                      +++++. ++++..++. ..........|.+++.|..++.+....  +++.+.++++.+++.+.+++..+.   .....+.
T Consensus       241 ~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~---v~v~~p~  317 (388)
T COG1168         241 CAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPG---VKVTEPQ  317 (388)
T ss_pred             heeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCC---cEEecCC
Confidence            997766 566544432 222344445688999999999987765  668889999999999999987533   3344455


Q ss_pred             eeeEEEEEEecCCChhhHHHHHHHHHHC-Cceecc------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          214 RGLFNAVEFDKTALPVSAYDICLKMKER-GILAKP------THDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       214 ~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ...+.|+++...  +.+.+++.+.++++ +|.+.+      .+.+++|++  +.++++-+++++++|+++++
T Consensus       318 gTYL~WLD~r~l--~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN--~acpr~~L~eal~ri~~al~  385 (388)
T COG1168         318 GTYLAWLDCREL--GLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLN--FACPRAILEEALERLKRALK  385 (388)
T ss_pred             Cceeeeeecccc--CCChHHHHHHHHHhhcEeccCCCccCcCCCceEEEe--cCCCHHHHHHHHHHHHHHHh
Confidence            556668888864  34556788888776 555554      467999999  88999999999999999887

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.92  E-value=8.3e-24  Score=193.70  Aligned_cols=223  Identities=23%  Similarity=0.331  Sum_probs=170.2

Q ss_pred             ccccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c-ccccccccccc
Q 021893           40 LKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASD  116 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~~  116 (306)
                      ..++++|+++||++++... +++++|+++++++++|.+.+    +++|.++|++||++||+||+|+ | +++.|..+ .+
T Consensus       157 ~~~~~~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~----l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~-~~  231 (407)
T PRK09064        157 HIFRHNDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAP----IAEICDLADKYNALTYLDEVHAVGMYGPRGGGI-AE  231 (407)
T ss_pred             EEECCCCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEECCCcccccCCCCCCh-HH
Confidence            4567889999999998543 46899999999999999988    9999999999999999999998 6 57777655 34


Q ss_pred             cCCC--CCcEE--Eeccccc--CCcccceeeEeCHHHHhhcCCCCcc--CCCCCCHHHHHHHHHHHHHHhhcc-HHHHHH
Q 021893          117 WEEV--RPDMV--ILGKALG--GGVIPVSAVLADKEVMLCIQPGEHG--STFGGNPLASAVAIASLDVIRDEK-LAERSA  187 (306)
Q Consensus       117 ~~~~--~~d~~--s~sK~~~--~G~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~aa~~al~~~~~~~-~~~~~~  187 (306)
                      ..++  .+|++  ||||+++  ||     |+++++++++.+......  .+...++.+++++.++++.+...+ ..++++
T Consensus       232 ~~~~~~~~div~~t~sKa~g~~GG-----~~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~  306 (407)
T PRK09064        232 RDGLMDRIDIIEGTLAKAFGVMGG-----YIAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQ  306 (407)
T ss_pred             hcCCCCCCeEEEEecchhhhccCc-----eEecCHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence            4443  45666  9999998  44     488899988876543222  234567778888889999887643 457788


Q ss_pred             HHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH-CCceeccC-------CCCEEEEeCCC
Q 021893          188 HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPT-------HDTIVRLTPPL  259 (306)
Q Consensus       188 ~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~-------~~~~lRi~~~~  259 (306)
                      ++++++++.|++++..      .....+.++++.+..   ...+.++.+.|++ +||++.+.       +.+++|++++.
T Consensus       307 ~~~~~l~~~L~~~g~~------~~~~~~~iv~i~~~~---~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~  377 (407)
T PRK09064        307 ERAAKLKAALDAAGIP------VMPNESHIVPVMVGD---PEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTP  377 (407)
T ss_pred             HHHHHHHHHHHHcCCC------CCCCCCCEEEEEeCC---HHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCC
Confidence            8999999999875311      112335566665542   2456789999875 59998752       23689999999


Q ss_pred             CCCHHHHHHHHHHHHHHHhhhcC
Q 021893          260 SISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       260 ~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      .++++|++.+++.|+++++ ++.
T Consensus       378 ~~t~edi~~l~~~l~~~~~-~~~  399 (407)
T PRK09064        378 FHTDEMIDHLVEALVEVWA-RLG  399 (407)
T ss_pred             CCCHHHHHHHHHHHHHHHH-HcC
Confidence            9999999999999999998 653

>PRK07682 hypothetical protein; Validated

Probab=99.92  E-value=2.2e-24  Score=195.70  Aligned_cols=263  Identities=14%  Similarity=0.140  Sum_probs=179.6

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------ccccc-------CCCHHHHHHHHHhcCCcEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVD-------FGDITALEKIFKESGDQIAGFL   65 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~-------~~d~~~le~~i~~~~~~~~~v~   65 (306)
                      +|++..|+.++-...+.++..+.+..-...|.++.           ++.++       ..|++.|+++++   +++++++
T Consensus        83 ~i~~t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~  159 (378)
T PRK07682         83 EIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAIT---AKTKAIL  159 (378)
T ss_pred             cEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcC---cccEEEE
Confidence            57777777776655555554433222222233322           11121       126899998886   4678887


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccC---CCCCcEEEeccccc-CCccccee
Q 021893           66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWE---EVRPDMVILGKALG-GGVIPVSA  140 (306)
Q Consensus        66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~---~~~~d~~s~sK~~~-~G~~~~g~  140 (306)
                      ++.++|++|. +.+.+.+++|.++|++|++++|+||+|.++.+.+...++ ...   +....+.||||.++ +|+ |+||
T Consensus       160 ~~~p~NPtG~-~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-R~G~  237 (378)
T PRK07682        160 LCSPNNPTGA-VLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGW-RLGF  237 (378)
T ss_pred             EECCCCCcCc-CcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhh-hhhh
Confidence            7777899996 568999999999999999999999999987554432211 111   12223559999999 899 9999


Q ss_pred             eEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893          141 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN  218 (306)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~  218 (306)
                      +++++++++.+........++.+.+.+.++..+++...  .++..++++++++.+.+.|++..     .....+..|.++
T Consensus       238 ~~~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-----~~~~~p~g~~~~  312 (378)
T PRK07682        238 IAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEIG-----LTCHVPGGAFYA  312 (378)
T ss_pred             hhcCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHCC-----CccCCCCeeEEE
Confidence            99999999888654333445667788888777775421  12345666777777777777652     222334566777


Q ss_pred             EEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          219 AVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       219 ~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      |..++..  ..+..++++.|+ ++||.+.|+      +++++|++.  ..+++++++++++|+++++ ++
T Consensus       313 ~~~~~~~--~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~--~~~~~~l~~~l~~l~~~l~-~~  377 (378)
T PRK07682        313 FPSISST--GLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSY--ATSLEQLQEAMKRMKRFVE-NK  377 (378)
T ss_pred             EEeccCC--CCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEe--CCCHHHHHHHHHHHHHHHh-hc
Confidence            7766431  245678998886 679999985      268999995  4578999999999999987 54

>PRK07681 aspartate aminotransferase; Provisional

Probab=99.92  E-value=6.5e-24  Score=193.83  Aligned_cols=258  Identities=13%  Similarity=0.162  Sum_probs=179.0

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v   64 (306)
                      ..|++..|+.++-...+..+..+.+..-...|.|+.           ++.+|.       .|++++++.+.   ++++++
T Consensus        94 ~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~v  170 (399)
T PRK07681         94 KEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA---DKAKMM  170 (399)
T ss_pred             CeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc---ccceEE
Confidence            468888888888777666665544333333344444           122332       16788887775   468888


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-ccC---CCCCcEEEeccccc-CCcccc
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWE---EVRPDMVILGKALG-GGVIPV  138 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~~---~~~~d~~s~sK~~~-~G~~~~  138 (306)
                      +++.++|++|.+ .+++.+++|.++|++||++||+||+|.++...+... ++ ...   .....+.||||.++ +|+ |+
T Consensus       171 ~l~~P~NPTG~~-~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-Ri  248 (399)
T PRK07681        171 ILNFPGNPVPAM-AHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGS-RI  248 (399)
T ss_pred             EEeCCCCCcCcC-CCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccc-ee
Confidence            888779999955 589999999999999999999999999875444221 11 111   12234559999998 999 99


Q ss_pred             eeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893          139 SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL  216 (306)
Q Consensus       139 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~  216 (306)
                      ||+++++++++.+........++.+.+.+.++..+++....  ++..+.++++.+.+.+.|++.     ++....+..|.
T Consensus       249 G~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~p~~g~  323 (399)
T PRK07681        249 GYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF-----GWNVDKPAGSM  323 (399)
T ss_pred             EEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-----CCcccCCCeee
Confidence            99999999998887644445566777777777777653211  223344555555555555543     12223356688


Q ss_pred             EEEEEEecCCChhhHHHHHHHHHH-CCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          217 FNAVEFDKTALPVSAYDICLKMKE-RGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       217 ~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      ++|+.++.   ..+..++++.|++ +||.+.|+      +++++|++.  ..+.+++++++++|++
T Consensus       324 f~~~~l~~---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~--~~~~~~~~~~l~~l~~  384 (399)
T PRK07681        324 FVWAEIPK---GWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIAL--VQDEEVLQQAVENIRN  384 (399)
T ss_pred             EEEEECCC---CCCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEe--cCCHHHHHHHHHHHHH
Confidence            89998874   3457789999987 79999885      247999995  4678999999999987

>PRK06207 aspartate aminotransferase; Provisional

Probab=99.92  E-value=1.6e-23  Score=191.36  Aligned_cols=265  Identities=15%  Similarity=0.163  Sum_probs=178.4

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC----------CCHHHHHHHHHhcCCcE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF----------GDITALEKIFKESGDQI   61 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~----------~d~~~le~~i~~~~~~~   61 (306)
                      ..|++..|+.++-...+.++..+.+..-...|.|+.           ++.++.          .|++.|++++++   ++
T Consensus       103 ~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~---~~  179 (405)
T PRK06207        103 DELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA---GV  179 (405)
T ss_pred             CCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh---cC
Confidence            457777887777766666555543333333344433           122221          278999998873   57


Q ss_pred             EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccccCC----CCCcEEEeccccc-CCc
Q 021893           62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWEE----VRPDMVILGKALG-GGV  135 (306)
Q Consensus        62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~~~----~~~d~~s~sK~~~-~G~  135 (306)
                      ++++++.++|++|.+ .+.+.+++|.++|++||++||+||+|..+.+.+..+ +...+.    ....+.||||.++ +|+
T Consensus       180 k~v~l~~P~NPTG~~-~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGl  258 (405)
T PRK06207        180 RVFLFSNPNNPAGVV-YSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGY  258 (405)
T ss_pred             eEEEECCCCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCccc
Confidence            788888788999965 579999999999999999999999999875555322 111111    1223448999999 999


Q ss_pred             ccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE
Q 021893          136 IPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG  213 (306)
Q Consensus       136 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~  213 (306)
                       |+||+++++++++.+.........+.+.+.+.++..+++...  -++..++++++++.+.+.|++    .++.....+.
T Consensus       259 -RiG~ii~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~p~  333 (405)
T PRK06207        259 -RLGVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRG----VEGVFVRAPQ  333 (405)
T ss_pred             -ceEEEEcCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc----CCCceecCCC
Confidence             999999999998888754444444556677777766664210  112233344444444444443    2223333456


Q ss_pred             eeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          214 RGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       214 ~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .|+++|+.++..  ..+..++++.|+ ++||.+.|+      .++++|++..  .+.+++++++++|.++++ ++
T Consensus       334 gg~fl~~~l~~~--~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~--~~~~~l~~al~rl~~~l~-~~  403 (405)
T PRK06207        334 AGSYLFPRLPRL--AVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFS--QDHAAAVAAAERIAQLIE-RY  403 (405)
T ss_pred             eeEEEEEeCccc--CCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH-Hh
Confidence            788999988741  135678999997 679999985      2579999954  578999999999999988 64

>PLN00175 aminotransferase family protein; Provisional

Probab=99.92  E-value=6.8e-24  Score=194.18  Aligned_cols=262  Identities=17%  Similarity=0.229  Sum_probs=183.2

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC------CCHHHHHHHHHhcCCcEEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF------GDITALEKIFKESGDQIAGFLF   66 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~------~d~~~le~~i~~~~~~~~~v~v   66 (306)
                      .|++..|+.+|-.....++..+.+..-...|.++.           +..++.      .|++.|++.+.   ++++++++
T Consensus       117 ~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~---~~~k~i~i  193 (413)
T PLN00175        117 EVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFT---SKTRAILI  193 (413)
T ss_pred             CEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcC---cCceEEEe
Confidence            58888888888766666555443332223344433           122222      26888998886   46889999


Q ss_pred             ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccCC---CCCcEEEeccccc-CCcccceee
Q 021893           67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEE---VRPDMVILGKALG-GGVIPVSAV  141 (306)
Q Consensus        67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~~---~~~d~~s~sK~~~-~G~~~~g~~  141 (306)
                      ++++|++|.+ .+.+.+++|.++|++||+++|+||+|.++.+.+...+. +..+   ....+.||||.++ +|+ |+||+
T Consensus       194 ~~p~NPtG~~-~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~-RiG~~  271 (413)
T PLN00175        194 NTPHNPTGKM-FTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGW-KIGWA  271 (413)
T ss_pred             cCCCCCCCcC-CCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcch-heeee
Confidence            9999999965 58999999999999999999999999976544322211 1112   2223449999999 999 99999


Q ss_pred             EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893          142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA  219 (306)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~  219 (306)
                      ++++++++.+........++.+.+.+.++.++++....  ++..++++++++.+.+.|++.+     .....+..|.++|
T Consensus       272 v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~p~g~~f~~  346 (413)
T PLN00175        272 IAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEVG-----FKVYPSSGTYFVM  346 (413)
T ss_pred             EeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-----CeecCCCeeEEEE
Confidence            99999998887655555677788888888877754211  3345666677777777776642     2223345677788


Q ss_pred             EEEecCCChhhHHHHHHHHH-HCCceeccC---------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          220 VEFDKTALPVSAYDICLKMK-ERGILAKPT---------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       220 i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~---------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +.++..+ ..+..++++.|+ ++||.+.|+         +.+++|++.  ..+++++++++++|+++++
T Consensus       347 ~~~~~~~-~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~--~~~~e~l~~~~~rL~~~~~  412 (413)
T PLN00175        347 VDHTPFG-FENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAF--CKDEETLRAAVERMKTKLK  412 (413)
T ss_pred             EeccccC-CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEE--cCCHHHHHHHHHHHHHHHh
Confidence            8764211 124678999887 559998875         146999995  4689999999999998876

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.92  E-value=3.3e-23  Score=188.17  Aligned_cols=232  Identities=18%  Similarity=0.245  Sum_probs=171.9

Q ss_pred             cccccCCCHHHHHHHHHhc-----------CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh--c
Q 021893           39 HLKVDFGDITALEKIFKES-----------GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS--G  105 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~-----------~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~--g  105 (306)
                      +..++|+|++.+++.++..           .+++++|++|++++++|.+.+    +++|+++|++||+++|+||+|+  .
T Consensus       106 ~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~----l~~i~~l~~~~g~~livDe~~~~g~  181 (392)
T PLN03227        106 VRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAP----LKELVALKEEFHYRLILDESFSFGT  181 (392)
T ss_pred             EEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccC----HHHHHHHHHHcCCEEEEECcccccc
Confidence            3557888988888766542           136899999999999999988    9999999999999999999998  3


Q ss_pred             ccccccccccccCCCCC----cEEEec--ccccCCcccceeeEeCHHHHhhcCCCCccCCCCCC--HHHHHHHHHHHHHH
Q 021893          106 LARSGRMLASDWEEVRP----DMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGN--PLASAVAIASLDVI  177 (306)
Q Consensus       106 ~~~~g~~~~~~~~~~~~----d~~s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~aa~~al~~~  177 (306)
                      +|+.|.+ ..+++++.|    |++++|  |+++  + ..|++++++++++.++...+..+|.++  +..+.++.++++..
T Consensus       182 ~g~~G~g-~~~~~g~~p~~~~Div~~slsk~~g--~-~gg~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~  257 (392)
T PLN03227        182 LGKSGRG-SLEHAGLKPMVHAEIVTFSLENAFG--S-VGGMTVGSEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGE  257 (392)
T ss_pred             cCCCCCc-HHHHcCCCCCCCceEEEeechhhhh--c-cCcEEecCHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHH
Confidence            4555554 467777777    877555  6554  3 556688899988777655555666654  66777777777554


Q ss_pred             -hhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE--------eeeEEEEEEecCCCh------hhHHHHHHHHHHCC
Q 021893          178 -RDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG--------RGLFNAVEFDKTALP------VSAYDICLKMKERG  242 (306)
Q Consensus       178 -~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~--------~g~~~~i~~~~~~~~------~~~~~~~~~l~~~G  242 (306)
                       ..++..++++++++++++.|++.  .++ .+..+++        .+.++.+.+.+....      ....++++.|+++|
T Consensus       258 ~~~~~~~~~l~~~~~~l~~~L~~~--~~~-~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G  334 (392)
T PLN03227        258 LAGPQLLNRLHDSIANLYSTLTNS--SHP-YALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEG  334 (392)
T ss_pred             hcCHHHHHHHHHHHHHHHHHHHhc--CCc-cccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCC
Confidence             44568889999999999999873  222 3334443        356788887541100      01358899999999


Q ss_pred             ceeccC-----------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          243 ILAKPT-----------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       243 i~~~~~-----------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +.+.+.           ++..+|++++..+|++||++++++|+++++ ++.
T Consensus       335 i~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~-~~~  384 (392)
T PLN03227        335 VAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVE-AIL  384 (392)
T ss_pred             CEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHH-HHH
Confidence            988531           256789999999999999999999999998 763

>PRK07505 hypothetical protein; Provisional

Probab=99.91  E-value=3.3e-23  Score=189.34  Aligned_cols=246  Identities=18%  Similarity=0.218  Sum_probs=165.4

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+||++.++|||.....      ......    ..++..+|++|++.|+++++.  ..+.+++++|++ ++|.+.+    
T Consensus       135 ~~vi~~~~~~H~s~~~~------~~~~~~----~~~v~~~~~~d~~~l~~~~~~--~~~~~vl~~p~~-~~G~~~~----  197 (402)
T PRK07505        135 PPHMVFDKNAHASLNIL------KGICAD----ETEVETIDHNDLDALEDICKT--NKTVAYVADGVY-SMGGIAP----  197 (402)
T ss_pred             CCEEEEchhhhHhHHhh------hhhhhc----CCeEEEeCCCCHHHHHHHHhc--CCCEEEEEeccc-ccCCcCC----
Confidence            46899999999843111      111111    135678899999999999874  245677777766 5566777    


Q ss_pred             HHHHHHHHHHcCCEEEEehhhh--cccccccccccccCCC-CCcEE----EecccccCCcccceeeEe-CHHHHhhcCCC
Q 021893           83 LKAVRDLCSKYNILMIADEIQS--GLARSGRMLASDWEEV-RPDMV----ILGKALGGGVIPVSAVLA-DKEVMLCIQPG  154 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~--g~~~~g~~~~~~~~~~-~~d~~----s~sK~~~~G~~~~g~~~~-~~~~~~~~~~~  154 (306)
                      +++|.++|++||++||+||+|+  ++++.|..+..+..+. .+|..    |+||+++++   .|+++. ++++++.+...
T Consensus       198 ~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~---Gg~~~~~~~~~~~~~~~~  274 (402)
T PRK07505        198 VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS---GGVIMLGDAEQIELILRY  274 (402)
T ss_pred             HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc---CeEEEeCCHHHHHHHHHh
Confidence            9999999999999999999994  6777777655555554 45532    899999832   144654 77888877665


Q ss_pred             CccCCCCC--CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE-EEEEecCCChhhH
Q 021893          155 EHGSTFGG--NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN-AVEFDKTALPVSA  231 (306)
Q Consensus       155 ~~~~~~~~--~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~-~i~~~~~~~~~~~  231 (306)
                      .+..++++  ++++++++.++++.+.++.+.+.    .+.+++.++.....   .....++.+.++ ++.+..   ....
T Consensus       275 ~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~----~~~l~~~~~~~~~~---~~~~~~g~~~~i~~~~~~~---~~~~  344 (402)
T PRK07505        275 AGPLAFSQSLNVAALGAILASAEIHLSEELDQL----QQKLQNNIALFDSL---IPTEQSGSFLPIRLIYIGD---EDTA  344 (402)
T ss_pred             CCCceeCCCCCHHHHHHHHHHHHHHhccCcHHH----HHHHHHHHHHHHHH---HHhcCCCCCCCEEEEEeCC---HHHH
Confidence            55555543  45788888888886655443332    23333333322111   001223444443 222221   2356


Q ss_pred             HHHHHHHHHCCceeccC-------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          232 YDICLKMKERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       232 ~~~~~~l~~~Gi~~~~~-------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .++.+.|+++||++.+.       +.++||++|+..++++++++++++|++++.
T Consensus       345 ~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~  398 (402)
T PRK07505        345 IKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILD  398 (402)
T ss_pred             HHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHH
Confidence            78999999999999864       236899999999999999999999999887

>PRK06348 aspartate aminotransferase; Provisional

Probab=99.91  E-value=3.6e-23  Score=187.99  Aligned_cols=261  Identities=16%  Similarity=0.253  Sum_probs=179.8

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v   64 (306)
                      ..|++..|+.||-...+.++..+....-...|.++.           ++.++.       .|++.|++.++   ++++++
T Consensus        90 ~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v  166 (384)
T PRK06348         90 NEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALIT---SKTKAI  166 (384)
T ss_pred             hhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhC---cCccEE
Confidence            468889999998877777766644333333344433           122221       36899998886   467788


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccCC---CCCcEEEeccccc-CCcccce
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEE---VRPDMVILGKALG-GGVIPVS  139 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~~---~~~d~~s~sK~~~-~G~~~~g  139 (306)
                      +++.++|++|.+ .+.+.+++|.++|++||+++|+||+|.++...+...+. ...+   ....+.||||.++ +|+ |+|
T Consensus       167 ~l~~p~NPtG~~-~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl-RiG  244 (384)
T PRK06348        167 ILNSPNNPTGAV-FSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGW-RIG  244 (384)
T ss_pred             EEeCCCCCCCcC-CCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccc-cce
Confidence            888889999865 58999999999999999999999999987543322111 1111   1223449999999 999 999


Q ss_pred             eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893          140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF  217 (306)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~  217 (306)
                      |+++++++++.+........++.+.+.+.++..+++....  +++.+.++++.+.+.+.|+..    +......+..|.+
T Consensus       245 ~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~----~~~~~~~p~gg~~  320 (384)
T PRK06348        245 YVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESI----PNLSLHPPKGSIY  320 (384)
T ss_pred             eeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcC----CCceeccCCeeEE
Confidence            9999999888877555555667788888888777753221  223444555555555555542    2222233456778


Q ss_pred             EEEEEecCCChhhHHHHHHHHHH-CCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          218 NAVEFDKTALPVSAYDICLKMKE-RGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       218 ~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      +|+.++..  ..+..++++.|++ +||.+.|+      +.+++|++.  ..+.+++++++++|++.
T Consensus       321 ~~~~~~~~--~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~al~~l~~~  382 (384)
T PRK06348        321 AFINIKKT--GLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLAC--TVGIEVLEEAFNRIEKM  382 (384)
T ss_pred             EEEecccC--CCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEe--cCCHHHHHHHHHHHHhh
Confidence            89888631  2457789998874 69999975      257999995  46889999999988753

>PRK06108 aspartate aminotransferase; Provisional

Probab=99.91  E-value=4.5e-23  Score=187.34  Aligned_cols=262  Identities=16%  Similarity=0.172  Sum_probs=177.3

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC--------CCHHHHHHHHHhcCCcEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF--------GDITALEKIFKESGDQIAG   63 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~--------~d~~~le~~i~~~~~~~~~   63 (306)
                      ..|++..|+.+|-..+...+..+.+..-...|.++.           +..+|.        .|++.+++.++   +++++
T Consensus        85 ~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~---~~~~~  161 (382)
T PRK06108         85 ERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAIT---PRTRA  161 (382)
T ss_pred             ceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcC---ccceE
Confidence            467777888877665555544432222222233322           233333        26788888886   46788


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccc-cccc-c-cccCC---CCCcEEEeccccc-CCcc
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS-GRML-A-SDWEE---VRPDMVILGKALG-GGVI  136 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~-g~~~-~-~~~~~---~~~d~~s~sK~~~-~G~~  136 (306)
                      +++++++|++|.+ .+.+.+++|.++|+++|+++|+||+|.++... +... + .+...   ....+.||||.++ +|+ 
T Consensus       162 i~l~~p~NPtG~~-~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~-  239 (382)
T PRK06108        162 LFINSPNNPTGWT-ASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGW-  239 (382)
T ss_pred             EEEECCCCCCCcc-cCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCccc-
Confidence            8888889999965 58999999999999999999999999976443 2111 1 11111   1122449999998 899 


Q ss_pred             cceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEe
Q 021893          137 PVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR  214 (306)
Q Consensus       137 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~  214 (306)
                      |+||+++++++++.+...........+.+.+.++..+++....  ++..++++++++.+++.|++..    ++....+..
T Consensus       240 RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~----~~~~~~p~~  315 (382)
T PRK06108        240 RLGWLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALP----GVEVAKPDG  315 (382)
T ss_pred             ceeeeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCC----CCcccCCCe
Confidence            9999999999988876543334455677888787777754321  3345566666666666665541    222233445


Q ss_pred             eeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          215 GLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       215 g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      |.++|+.++.   ..+..++++.|+ ++||.+.|+      +.+++|++++.  +++++++++++|+++++
T Consensus       316 g~~~~~~l~~---~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~  381 (382)
T PRK06108        316 AMYAFFRIPG---VTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLRRFLA  381 (382)
T ss_pred             eEEEEEeCCC---CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence            7777887764   235678999886 569999874      25799999665  89999999999998876

>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]

Probab=99.91  E-value=2.5e-24  Score=186.71  Aligned_cols=261  Identities=14%  Similarity=0.214  Sum_probs=187.2

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------------CCHHHHHHHHHhcC
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------------GDITALEKIFKESG   58 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------------~d~~~le~~i~~~~   58 (306)
                      +.|+|..|+|.+-..+.+++-++.+..-.++|.++-           .++++.             .|+++||.++.   
T Consensus        94 ~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t---  170 (420)
T KOG0257|consen   94 DEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKIT---  170 (420)
T ss_pred             ccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhcc---
Confidence            569999999999888888888877666666666644           133332             28999999999   


Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-c-cccCC---CCCcEEEeccccc-
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-A-SDWEE---VRPDMVILGKALG-  132 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~-~~~~~---~~~d~~s~sK~~~-  132 (306)
                      ++|++|+++.++|++|.+ .+++.|++|+++|++||+++|+||+|..+.+.|..+ . ....|   ....+.|+||.++ 
T Consensus       171 ~kTk~Ii~ntPhNPtGkv-fsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~  249 (420)
T KOG0257|consen  171 EKTKAIILNTPHNPTGKV-FSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGV  249 (420)
T ss_pred             CCccEEEEeCCCCCcCcc-cCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeee
Confidence            689999999999999965 589999999999999999999999999776777521 1 12233   3445669999999 


Q ss_pred             CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh---h-------ccHHHHHHHHHHHHHHHHHHHHh
Q 021893          133 GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR---D-------EKLAERSAHLGEELRQHLFKIQQ  202 (306)
Q Consensus       133 ~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~---~-------~~~~~~~~~~~~~l~~~L~~~~~  202 (306)
                      .|| |+||+++++.++..+.+......+.-++..+.|..+++..-.   +       .++.+.++++++.+.+.|++++ 
T Consensus       250 TGW-rlGW~igp~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg-  327 (420)
T KOG0257|consen  250 TGW-RLGWAIGPKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEELG-  327 (420)
T ss_pred             eee-eeeeeechHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence            899 999999988888877776555556555555555444443322   1       2356778888888888888874 


Q ss_pred             hCCCceeeEEEeeeEEEEEEecCC---------ChhhHHHHHHHHHHC-CceeccC-----------CCCEEEEeCCCCC
Q 021893          203 QFPNYVKEVRGRGLFNAVEFDKTA---------LPVSAYDICLKMKER-GILAKPT-----------HDTIVRLTPPLSI  261 (306)
Q Consensus       203 ~~~~~~~~~~~~g~~~~i~~~~~~---------~~~~~~~~~~~l~~~-Gi~~~~~-----------~~~~lRi~~~~~~  261 (306)
                          .....+..+.++|.+++...         ...+...+++++.++ |+.+.|.           ..+.+|++  ...
T Consensus       328 ----~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~--~~k  401 (420)
T KOG0257|consen  328 ----LKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFC--FCK  401 (420)
T ss_pred             ----CccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHH--HHh
Confidence                33356667777888877211         011233567788765 8887764           13567777  666


Q ss_pred             CHHHHHHHHHHHHH
Q 021893          262 SSNELQEGSKALHD  275 (306)
Q Consensus       262 t~~~i~~~~~~l~~  275 (306)
                      +++.++.+.++|++
T Consensus       402 ~~~~L~~a~e~l~~  415 (420)
T KOG0257|consen  402 ADETLRKAIERLKK  415 (420)
T ss_pred             hHHHHHHHHHHHhh
Confidence            77778877777763

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.91  E-value=7.7e-23  Score=185.80  Aligned_cols=218  Identities=16%  Similarity=0.147  Sum_probs=166.9

Q ss_pred             cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c-ccccccccccc
Q 021893           39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASD  116 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~~  116 (306)
                      +..++|||++.|++++++++++.++|++++++++.|.+.+    |++|.++|++||++||+||+|+ | +|..|.+. .+
T Consensus       228 ~~~f~HND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiap----L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~-~e  302 (476)
T PLN02955        228 VFVYRHCDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAP----MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGV-AE  302 (476)
T ss_pred             EEEeCCCCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCcEEEEcccccCceecCCCCcH-HH
Confidence            4568999999999999887667789999999999999999    9999999999999999999998 3 46656554 45


Q ss_pred             cCCCCCcE----EEeccccc--CCcccceeeEeCHHHHhhcCCCCccCCCC--CCHHHHHHHHHHHHHHhhc-cHHHHHH
Q 021893          117 WEEVRPDM----VILGKALG--GGVIPVSAVLADKEVMLCIQPGEHGSTFG--GNPLASAVAIASLDVIRDE-KLAERSA  187 (306)
Q Consensus       117 ~~~~~~d~----~s~sK~~~--~G~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~aa~~al~~~~~~-~~~~~~~  187 (306)
                      .+++.+|+    .||||++|  ||+     +++++++++.++.......|+  .++...++++++++.+..+ ..+++++
T Consensus       303 ~~g~~~di~ii~~TLsKA~G~~GGf-----i~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~  377 (476)
T PLN02955        303 EFNCEADVDLCVGTLSKAAGCHGGF-----IACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIW  377 (476)
T ss_pred             HhCCCCCCcEEEEeCccchhccCce-----eecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence            55554443    69999998  666     999998888877543343333  3455666777888888653 3556777


Q ss_pred             HHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------CCCEEEEeCCCC
Q 021893          188 HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLS  260 (306)
Q Consensus       188 ~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~~lRi~~~~~  260 (306)
                      ++.+++++.   .  .   ...    ...++++.+.+   .....++++.|+++|+++.+.       +...+|++++..
T Consensus       378 ~n~~~fr~~---~--G---~~~----~sPI~pI~ig~---~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~  442 (476)
T PLN02955        378 ERVKEFKAL---S--G---VDI----SSPIISLVVGN---QEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAA  442 (476)
T ss_pred             HHHHHHHHh---c--C---CCC----CCCEEEEEeCC---HHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCC
Confidence            777777763   1  1   111    25566666664   566778999999999998842       345799999999


Q ss_pred             CCHHHHHHHHHHHHHHHhhhcC
Q 021893          261 ISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       261 ~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      ++++||+.+++.|.++.. ...
T Consensus       443 Ht~edId~lv~~L~~~~~-~~~  463 (476)
T PLN02955        443 HTTEDVKKLITALSSCLD-FDN  463 (476)
T ss_pred             CCHHHHHHHHHHHHHHHh-hhc
Confidence            999999999999998877 443

>PRK09148 aminotransferase; Validated

Probab=99.91  E-value=2.6e-23  Score=190.05  Aligned_cols=268  Identities=13%  Similarity=0.164  Sum_probs=181.4

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCC----CHHHHHHHHHhcCCcEEEEEEcc
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFG----DITALEKIFKESGDQIAGFLFEP   68 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~----d~~~le~~i~~~~~~~~~v~v~~   68 (306)
                      .|++..|+.+|-...+..+..+.+..-...|.|+.           +..++.+    +++.+++.++.+.+++++++++.
T Consensus        94 ~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~  173 (405)
T PRK09148         94 QVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNY  173 (405)
T ss_pred             cEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeC
Confidence            58888888888766666665543333333344433           1223321    35567777776556788888888


Q ss_pred             ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-c-ccC---CCCCcEEEeccccc-CCcccceeeE
Q 021893           69 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-S-DWE---EVRPDMVILGKALG-GGVIPVSAVL  142 (306)
Q Consensus        69 ~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~-~~~---~~~~d~~s~sK~~~-~G~~~~g~~~  142 (306)
                      ++|++|.+ .+.+.+++|.++|++||+++|+||+|.++.+.+..+. . ...   +....+.||||.++ +|+ |+||++
T Consensus       174 P~NPtG~~-~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGl-R~G~~v  251 (405)
T PRK09148        174 PSNPTAYV-ADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGW-RMGFAV  251 (405)
T ss_pred             CCCCCCcC-CCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcch-heeeee
Confidence            89999965 5899999999999999999999999997654432221 1 111   11223459999999 999 999999


Q ss_pred             eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEE
Q 021893          143 ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV  220 (306)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i  220 (306)
                      +++++++.+........++.+.+.+.++...++....  +...+.++++++.+.+.|++.     +.....+..|+++|+
T Consensus       252 ~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~~p~~g~f~~~  326 (405)
T PRK09148        252 GNERLIAALTRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA-----GWDIPPPAASMFAWA  326 (405)
T ss_pred             CCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-----CCccCCCCeeEEEEE
Confidence            9999998887544444556677777777776652111  223445556666666666553     122234567888999


Q ss_pred             EEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          221 EFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       221 ~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .++.........++++.|+ ++||.+.|+      +.+++|++.  ..+.+.+++++++|.+++. +.
T Consensus       327 ~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~--~~~~~~l~~al~~l~~~l~-~~  391 (405)
T PRK09148        327 PIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIAL--VENEQRIRQAARNIKRFLS-SA  391 (405)
T ss_pred             ECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHHH-HH
Confidence            8874211123578888876 679999985      257999995  4678999999999999888 44

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=99.91  E-value=1.2e-22  Score=185.20  Aligned_cols=262  Identities=21%  Similarity=0.278  Sum_probs=179.4

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCCCHHHHHHHHHhc---CCcEEEEEEcc
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFGDITALEKIFKES---GDQIAGFLFEP   68 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~d~~~le~~i~~~---~~~~~~v~v~~   68 (306)
                      ..+++|.+++++......++..+.+..-...+.++.           ...++++|+++|++.+++.   +.++++|++++
T Consensus        99 ~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~  178 (393)
T TIGR01822        99 EDTILYASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEAQLKEARAAGARHRLIATDG  178 (393)
T ss_pred             CcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeCCCCHHHHHHHHHhhhhcCCCceEEEEeC
Confidence            367888999987665554543332211111111111           2345578999999999853   23789999999


Q ss_pred             ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cc-cccccccccccCCC--CCcEE--EecccccCCcccceeeE
Q 021893           69 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GL-ARSGRMLASDWEEV--RPDMV--ILGKALGGGVIPVSAVL  142 (306)
Q Consensus        69 ~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~-~~~g~~~~~~~~~~--~~d~~--s~sK~~~~G~~~~g~~~  142 (306)
                      +++++|.+.+    +++|.++|++||++||+||+|+ |+ +..|... .+..++  .+|+.  |+||+++ |+ ++||++
T Consensus       179 v~~~tG~~~~----l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~-~~~~~~~~~~di~~~s~sK~l~-g~-r~G~~~  251 (393)
T TIGR01822       179 VFSMDGVIAP----LDEICDLADKYDALVMVDECHATGFLGPTGRGS-HELCGVMGRVDIITGTLGKALG-GA-SGGFTT  251 (393)
T ss_pred             CccCCCCcCC----HHHHHHHHHHcCCEEEEECCccccCcCCCCCch-HHhcCCCCCCeEEEEEChHHhh-CC-CcEEEE
Confidence            9999999888    9999999999999999999995 43 2233221 122222  34554  8899986 46 899999


Q ss_pred             eCHHHHhhcCCCCccCCC--CCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893          143 ADKEVMLCIQPGEHGSTF--GGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA  219 (306)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~--~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~  219 (306)
                      +++++++.+........+  +.++..++++.++++.+.. ++..++++++.+++++.|++.+..   .  . ...+.++.
T Consensus       252 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~---~--~-~~~~~~~~  325 (393)
T TIGR01822       252 ARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAAGFD---I--K-PADHPIIP  325 (393)
T ss_pred             eCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCCC---C--C-CCCCCEEE
Confidence            999998877643222222  2345556667788877643 456788899999999988875211   1  1 12334455


Q ss_pred             EEEecCCChhhHHHHHHHHHHCCceecc-------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          220 VEFDKTALPVSAYDICLKMKERGILAKP-------THDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       220 i~~~~~~~~~~~~~~~~~l~~~Gi~~~~-------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +.+++   .....++++.|.++||.+..       .+...+|++++..++++||++++++|+++.+ ++
T Consensus       326 i~~~~---~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~-~~  390 (393)
T TIGR01822       326 VMLYD---AVLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGR-EL  390 (393)
T ss_pred             EEeCC---HHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH-Hh
Confidence            54442   34577899999999998863       1235799999999999999999999999877 54

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>PRK08636 aspartate aminotransferase; Provisional

Probab=99.91  E-value=9.9e-23  Score=186.25  Aligned_cols=268  Identities=15%  Similarity=0.181  Sum_probs=178.3

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHH----HHHHHHHhcCCcE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDIT----ALEKIFKESGDQI   61 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~----~le~~i~~~~~~~   61 (306)
                      .|++.+|+.+|-......+..+....-...|.|+.           +..++.       -|++    .++++++++..++
T Consensus        97 ~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~  176 (403)
T PRK08636         97 EVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKP  176 (403)
T ss_pred             eEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCc
Confidence            68899999998877777776655444444455544           122322       1344    4577777655678


Q ss_pred             EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-c---cccC-CCCCcEEEeccccc-CCc
Q 021893           62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-A---SDWE-EVRPDMVILGKALG-GGV  135 (306)
Q Consensus        62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~---~~~~-~~~~d~~s~sK~~~-~G~  135 (306)
                      ++++++.++|++|. +.+.+.+++|.++|++|++++|+||+|.++...+..+ +   .+.. +....+.||||.++ +|+
T Consensus       177 ~~i~~~~P~NPTG~-~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl  255 (403)
T PRK08636        177 KYVVVNFPHNPTTA-TVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGW  255 (403)
T ss_pred             eEEEEeCCCCCCCc-cCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccc
Confidence            88888888999995 4689999999999999999999999999775444211 1   1111 12223448999997 999


Q ss_pred             ccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE
Q 021893          136 IPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG  213 (306)
Q Consensus       136 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~  213 (306)
                       |+||+++++++++.+........+..+.+.+.++..+++....  +++.+.++++.+.+.+.|+..     ++....+.
T Consensus       256 -RiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----~~~~~~p~  329 (403)
T PRK08636        256 -RVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANA-----GWELQKPR  329 (403)
T ss_pred             -eeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-----CCcccCCC
Confidence             9999999999988876543333344555666555544431111  123334444444455555442     12223456


Q ss_pred             eeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          214 RGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       214 ~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .|+++|+.+++.....++.+++..++ ++||.+.|+      ..+++|++.  ..+.+++++++++|+++++ ..
T Consensus       330 ~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~~~~rl~~~l~-~~  401 (403)
T PRK08636        330 ASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIAL--IENENRIRQAARNIKKFLK-EL  401 (403)
T ss_pred             cceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEe--cCCHHHHHHHHHHHHHHHH-hh
Confidence            78899998874211123678887765 679999885      257999995  4689999999999999988 53

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=99.91  E-value=1.3e-22  Score=186.94  Aligned_cols=260  Identities=16%  Similarity=0.135  Sum_probs=179.4

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC----CCHHHHHHHHHhcCCcEEEEEEc
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF----GDITALEKIFKESGDQIAGFLFE   67 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~----~d~~~le~~i~~~~~~~~~v~v~   67 (306)
                      ..|++.+|+.++-.....++..+.+..-...|.|+.           ++.+|.    .|++.|+++++.   ++++++++
T Consensus       142 ~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g~~~~~l~~~~~~---~~k~i~~~  218 (431)
T PRK15481        142 FEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEGMQPEKLERALAQ---GARAVILT  218 (431)
T ss_pred             CeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCCCCCHHHHHHHHhc---CCCEEEEC
Confidence            368888888888777766666554443333455544           223332    368999998873   57777777


Q ss_pred             -cccCCCCcccCChhHHHHHHHHHHHc-CCEEEEehhhhccccccccccccc-CCCCCcEEEecccccCCcccceeeEeC
Q 021893           68 -PIQGEAGVIIPPDGYLKAVRDLCSKY-NILMIADEIQSGLARSGRMLASDW-EEVRPDMVILGKALGGGVIPVSAVLAD  144 (306)
Q Consensus        68 -~~~~~~G~~~~~~~~l~~i~~l~~~~-gi~li~De~~~g~~~~g~~~~~~~-~~~~~d~~s~sK~~~~G~~~~g~~~~~  144 (306)
                       .++|++|.+ .+.+.+++|.++|++| +++||+||+|.++...+....... ......+.||||.+++|+ |+||++++
T Consensus       219 p~p~NPTG~~-~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~Gl-RiG~~i~~  296 (431)
T PRK15481        219 PRAHNPTGCS-LSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALGPDL-RLAFVASD  296 (431)
T ss_pred             CCCCCCCCcc-CCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccCCCc-eeEEEeCC
Confidence             688888855 5899999999999999 999999999998743322111111 111223449999999999 99999999


Q ss_pred             HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEE
Q 021893          145 KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV  220 (306)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i  220 (306)
                      +++++.+........++.+.+++.++..+++.-.-    ++..+.++++++.+.+.|++.     +.....+..|+++|+
T Consensus       297 ~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-----~~~~~~p~gg~f~~~  371 (431)
T PRK15481        297 SATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-----GIAIPSPGDGLNLWL  371 (431)
T ss_pred             HHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCccccCCCeEEEEE
Confidence            99888876433333455678888888877753211    123444555555555555543     122335678999999


Q ss_pred             EEecCCChhhHHHHHHHHHHCCceeccCC-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          221 EFDKTALPVSAYDICLKMKERGILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       221 ~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .++.     +..++++.|.++||.+.|+.       .+++|++... .++++++.++++|+++++
T Consensus       372 ~l~~-----~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~~~  430 (431)
T PRK15481        372 PLDT-----DSQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST-LNDAEINRLAADLHQALN  430 (431)
T ss_pred             ECCC-----CHHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC-CChHHHHHHHHHHHHHhc
Confidence            8863     35678999999999999851       3589999643 468999999999999876

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=99.90  E-value=2e-22  Score=183.57  Aligned_cols=269  Identities=16%  Similarity=0.213  Sum_probs=178.8

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC------CCHHHHHHHHHhcCCcEEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF------GDITALEKIFKESGDQIAGFL   65 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~------~d~~~le~~i~~~~~~~~~v~   65 (306)
                      ..|++.+|+.+|-...+.++..+.+..-...|.+++           ++.++.      .|++.|+++++..++++++++
T Consensus        92 ~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~  171 (391)
T PRK07309         92 NEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVI  171 (391)
T ss_pred             CcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEE
Confidence            357777777777666555554432222122233322           122222      268999999986545688999


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-ccccc--CCCCCcEEEeccccc-CCcccceee
Q 021893           66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDW--EEVRPDMVILGKALG-GGVIPVSAV  141 (306)
Q Consensus        66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~--~~~~~d~~s~sK~~~-~G~~~~g~~  141 (306)
                      ++.++|++|.. .+.+.+++|.++|++||+++|+||+|.++...+.. .+...  .+....+.|+||.++ +|+ |+||+
T Consensus       172 l~~P~NPtG~~-~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-RvG~~  249 (391)
T PRK07309        172 LNYPANPTGVT-YSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGW-RIGLI  249 (391)
T ss_pred             EECCCCCCCcC-cCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccc-eeEEE
Confidence            88789999854 57889999999999999999999999987544422 11111  111223449999998 999 99999


Q ss_pred             EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893          142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA  219 (306)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~  219 (306)
                      ++++++++.+.........+.+.+.+.++...++....  .....+++++++.+.+.|++..     .....+..|.++|
T Consensus       250 v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~p~gg~~~~  324 (391)
T PRK07309        250 FAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDLG-----FKIIKPDGAFYIF  324 (391)
T ss_pred             EeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHCC-----CeecCCCeeEEEE
Confidence            99999988876533333345567777777766653211  2234556666666666666541     2223345677778


Q ss_pred             EEEecCCChhhHHHHHHHH-HHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          220 VEFDKTALPVSAYDICLKM-KERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       220 i~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +.++... ..+..++++.+ .++||.+.|+      ++++||++.+  .+.++++.++++|+++++ ++.
T Consensus       325 ~~l~~~~-~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~i~~l~~~~~-~~~  390 (391)
T PRK07309        325 AKIPAGY-NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA--ASMETIKEAMKRLKEYME-EHA  390 (391)
T ss_pred             EECCCCC-CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHH-hhc
Confidence            7776411 12466788765 4679999875      2579999954  478899999999999988 543

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=99.90  E-value=7.5e-23  Score=186.22  Aligned_cols=261  Identities=13%  Similarity=0.198  Sum_probs=170.3

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL   65 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~   65 (306)
                      .|++.+|+-++-...+..+..+.+..-...|.|+.           ++.+|.       .|++++++.+.   +++++++
T Consensus        94 ~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~  170 (388)
T PRK07366         94 EVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVL---AQARLMV  170 (388)
T ss_pred             eEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhc---ccceEEE
Confidence            47888888888777766655544333333355444           122222       24566666554   4678888


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-c-cc---ccCC-CCCcEEEeccccc-CCcccc
Q 021893           66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-L-AS---DWEE-VRPDMVILGKALG-GGVIPV  138 (306)
Q Consensus        66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~-~~---~~~~-~~~d~~s~sK~~~-~G~~~~  138 (306)
                      +++++|+||.. .+.+.+++|.++|++||++||+||+|.++.+.+.. . ++   +... ....+.||||.++ +|+ |+
T Consensus       171 l~~p~NPTG~~-~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~Gl-Ri  248 (388)
T PRK07366        171 LSYPHNPTTAI-APLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGF-RI  248 (388)
T ss_pred             EeCCCCCCCcc-CCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcch-hh
Confidence            88899999965 58999999999999999999999999987544421 1 11   1111 1123449999997 999 99


Q ss_pred             eeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893          139 SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL  216 (306)
Q Consensus       139 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~  216 (306)
                      ||+++++++++.+........++..+..+.++.+++.....  ++..+.++++++.+.+.|++.     ++....+..|+
T Consensus       249 G~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~-----~~~~~~p~~g~  323 (388)
T PRK07366        249 GFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI-----GWPVPLPEATM  323 (388)
T ss_pred             eehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-----CCcccCCCeeE
Confidence            99999999998876543333333333333444444431111  224455555666666666553     23334466789


Q ss_pred             EEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          217 FNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       217 ~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      ++|+.++... ..+..++++.|+ ++||.+.|+      +.+++|++.  ..+.+++++++++|++.+
T Consensus       324 f~~~~~~~~~-~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~~l~rl~~~l  388 (388)
T PRK07366        324 YVWAKLPEPW-QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFAL--VHDPDILEEAVERIAAFL  388 (388)
T ss_pred             EEEEECCccc-CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEe--cCCHHHHHHHHHHHHHhC
Confidence            9999887410 123567887775 669999985      247999995  457899999999998753

>PRK08175 aminotransferase; Validated

Probab=99.90  E-value=1.7e-22  Score=184.35  Aligned_cols=268  Identities=14%  Similarity=0.184  Sum_probs=180.5

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCC----CHHHHHHHHHhcCCcEEEEEEcc
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFG----DITALEKIFKESGDQIAGFLFEP   68 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~----d~~~le~~i~~~~~~~~~v~v~~   68 (306)
                      +|++.+|+.+|-...+..+..+....-...|.++.           +..++.+    ++++++++++++.+++++++++.
T Consensus        93 ~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~~~v~i~~  172 (395)
T PRK08175         93 EAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGF  172 (395)
T ss_pred             cEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCCcHHHHHHHHhhccCCceEEEEeC
Confidence            58888888888766655554433322222333332           1233332    47889998886545788999888


Q ss_pred             ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-ccC---CCCCcEEEeccccc-CCcccceeeE
Q 021893           69 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWE---EVRPDMVILGKALG-GGVIPVSAVL  142 (306)
Q Consensus        69 ~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~~---~~~~d~~s~sK~~~-~G~~~~g~~~  142 (306)
                      ++|++|.. .+.+.+++|.++|++||+++|+||+|.++...+... +. ...   +....+.||||.++ +|+ |+||++
T Consensus       173 p~NPtG~~-~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGl-RiG~~~  250 (395)
T PRK08175        173 PSNPTAQC-VELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGW-RIGFMV  250 (395)
T ss_pred             CCCCCCCC-CCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcch-hheeee
Confidence            88999855 579999999999999999999999998764444321 11 111   12223459999997 899 999999


Q ss_pred             eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEE
Q 021893          143 ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV  220 (306)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i  220 (306)
                      +++++++.+........++.+.+.+.++..+++....  +.+.+.++++.+.+.+.|+..     ++....+..|+++|+
T Consensus       251 ~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~~p~~g~~i~i  325 (395)
T PRK08175        251 GNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEA-----GWMVEMPKASMYVWA  325 (395)
T ss_pred             CCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-----CCcccCCCEEEEEEE
Confidence            9999998876544334455566666666666643211  223445555666666666654     132234557899999


Q ss_pred             EEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          221 EFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       221 ~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .+++.....++.++++.++ ++||.+.|+      +++++|++.  ..+.+.+.+++++|.+.+. +.
T Consensus       326 ~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~--~~~~~~~~~al~~l~~~l~-~~  390 (395)
T PRK08175        326 KIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFAL--IENRDRIRQAIRGIKAMFR-AD  390 (395)
T ss_pred             ECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEe--CCCHHHHHHHHHHHHHHHH-hc
Confidence            9875211124678888776 679999985      246899995  4678999999999999987 43

>PRK05957 aspartate aminotransferase; Provisional

Probab=99.90  E-value=9.8e-23  Score=185.43  Aligned_cols=264  Identities=15%  Similarity=0.186  Sum_probs=176.8

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-----CCHHHHHHHHHhcCCcEEEEEEc
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-----GDITALEKIFKESGDQIAGFLFE   67 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-----~d~~~le~~i~~~~~~~~~v~v~   67 (306)
                      .|++..|+-+|-.....++..+.+..-...|.++.           ++.++.     .|++.+++.++   ++++++++.
T Consensus        91 ~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~---~~~klv~~~  167 (389)
T PRK05957         91 AIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAIT---PKTRAIVTI  167 (389)
T ss_pred             eEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcC---cCceEEEEe
Confidence            57777777776654444433322222112233322           122222     27899999886   468888888


Q ss_pred             cccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-c---cCCCCCcEEEeccccc-CCcccceee
Q 021893           68 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-D---WEEVRPDMVILGKALG-GGVIPVSAV  141 (306)
Q Consensus        68 ~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~---~~~~~~d~~s~sK~~~-~G~~~~g~~  141 (306)
                      +++|++|.+ .+.+.+++|.++|++||+++|+||+|.++.+.+... +. .   .......+.|+||.++ +|+ |+||+
T Consensus       168 ~p~NPtG~~-~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-RiG~~  245 (389)
T PRK05957        168 SPNNPTGVV-YPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASW-RIGYM  245 (389)
T ss_pred             CCCCCCCcC-cCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccc-eeEEE
Confidence            899999965 478899999999999999999999999775443221 11 1   1112234558999998 999 99999


Q ss_pred             EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCc-eeeEEEeeeEE
Q 021893          142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--DEKLAERSAHLGEELRQHLFKIQQQFPNY-VKEVRGRGLFN  218 (306)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~g~~~  218 (306)
                      ++++++++.+.........+.+.+.+.++..+++.-.  -++..+.++++++.+.+.|+...    +. ....+..|.++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~~~~~~gg~~~  321 (389)
T PRK05957        246 VIPIHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQ----DRCTLHPANGAFYC  321 (389)
T ss_pred             ecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcC----CCccccCCCeeEEE
Confidence            9999999888764444444556667777666664311  12234455566666666665531    11 22334567888


Q ss_pred             EEEEecCCChhhHHHHHHHHH-HCCceeccCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          219 AVEFDKTALPVSAYDICLKMK-ERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       219 ~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      |+.++.   +.++.++++.|+ ++||.+.|+.      ++++|++.+ ..+++++++++++|.+.++ .+
T Consensus       322 ~~~~~~---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~-~~~~~~l~~~~~~l~~~~~-~~  386 (389)
T PRK05957        322 FLKVNT---DLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYG-ALQKATAKEGIERLVQGLK-TI  386 (389)
T ss_pred             EEeCCC---CCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHH-hh
Confidence            888764   356788999987 5799999862      469999953 3478899999999999887 54

>PRK08068 transaminase; Reviewed

Probab=99.90  E-value=1.1e-22  Score=185.19  Aligned_cols=258  Identities=13%  Similarity=0.120  Sum_probs=169.5

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL   65 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~   65 (306)
                      .|++..|+.++-...+..+..+....-...|.++.           +..+|.       .|++++++.+.   +++++++
T Consensus        96 ~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~v~  172 (389)
T PRK08068         96 EVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVA---EKAKLMY  172 (389)
T ss_pred             cEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhcc---ccceEEE
Confidence            57888888887766555554433322222333332           123333       25778887775   3577888


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-cccc-ccCC---CCCcEEEeccccc-CCcccce
Q 021893           66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLAS-DWEE---VRPDMVILGKALG-GGVIPVS  139 (306)
Q Consensus        66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~-~~~~---~~~d~~s~sK~~~-~G~~~~g  139 (306)
                      ++.++|++|.+ .+.+.+++|.++|++|++++|+||+|.++.+.+. ..+. ...+   ....+.||||.++ +|+ |+|
T Consensus       173 l~~P~NPTG~~-~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~Gl-RiG  250 (389)
T PRK08068        173 LNYPNNPTGAV-ATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGW-RVA  250 (389)
T ss_pred             EECCCCCCCCc-CCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccc-eeE
Confidence            88778999964 6899999999999999999999999987655442 2111 1111   2234459999997 999 999


Q ss_pred             eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893          140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF  217 (306)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~  217 (306)
                      |+++++++++.+.........+.+++.+.++..++.....  +...+.++++++.+.+.|++.+     +....+..|.+
T Consensus       251 ~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~g-----~~~~~~~g~~~  325 (389)
T PRK08068        251 FAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREIG-----WEVDAPKGSFF  325 (389)
T ss_pred             eEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-----CcccCCCeeEE
Confidence            9999999988876543322233344455555555532111  2345566666666666665542     22233455677


Q ss_pred             EEEEEecCCChhhHHHHHHHHHH-CCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          218 NAVEFDKTALPVSAYDICLKMKE-RGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       218 ~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      +|+.+++   ..++.++++.|++ +||.+.|+      +.+++|++.  ..+++.+..++++|+++
T Consensus       326 ~~v~~~~---~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~al~~l~~~  386 (389)
T PRK08068        326 AWMPVPK---GYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGL--LTDEERLREAVERIGKL  386 (389)
T ss_pred             EEEECCC---CCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEE--cCCHHHHHHHHHHHHHh
Confidence            8888864   3467889999986 59999874      257999995  45677888888888753

>PRK05942 aspartate aminotransferase; Provisional

Probab=99.90  E-value=1.6e-22  Score=184.34  Aligned_cols=258  Identities=16%  Similarity=0.211  Sum_probs=171.2

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL   65 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~   65 (306)
                      .|++..|+.+|-...+..+..+.+..-...|.|+.           ++.++.       .|++++++.+.   +++++++
T Consensus        99 ~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~  175 (394)
T PRK05942         99 EALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVA---QQAKILY  175 (394)
T ss_pred             eEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcc---ccceEEE
Confidence            36667777777666655554433332222344433           122222       36888888886   4788999


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-cc---ccc-CCCCCcEEEeccccc-CCcccce
Q 021893           66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LA---SDW-EEVRPDMVILGKALG-GGVIPVS  139 (306)
Q Consensus        66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~---~~~-~~~~~d~~s~sK~~~-~G~~~~g  139 (306)
                      +++++|++|.+ .+.+.+++|.++|++||+++|+||+|..+.+.+.. .+   .+. .+....+.||||.++ +|+ |+|
T Consensus       176 l~~P~NPtG~~-~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~Gl-RiG  253 (394)
T PRK05942        176 FNYPSNPTTAT-APREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGW-RVG  253 (394)
T ss_pred             EcCCCCCCCCc-CCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhh-hee
Confidence            88889999955 68999999999999999999999999876544321 11   111 122344569999997 999 999


Q ss_pred             eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893          140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF  217 (306)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~  217 (306)
                      |+++++++++.+........++.+.+.+.++..+++....  ++..++++++.+.+.+.|+..     +.....+..|.+
T Consensus       254 ~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~~~~~~~f  328 (394)
T PRK05942        254 FVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGEL-----GWNIPPTKATMY  328 (394)
T ss_pred             eeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-----CCeecCCCeeeE
Confidence            9999999998887644444555667777777777753322  234555666666666666553     122233456778


Q ss_pred             EEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          218 NAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       218 ~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      +|+.++.   ..+..+++..++ ++||.+.|+      +.+++|+++.  .+.+.+.+++++|.++
T Consensus       329 ~~~~~~~---~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~  389 (394)
T PRK05942        329 LWVPCPV---GMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI--ADCDRLGEALDRLKQA  389 (394)
T ss_pred             EEEECCC---CCCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence            8888864   234567776554 679999874      2579999964  4566677777766543

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=99.90  E-value=1.7e-22  Score=184.30  Aligned_cols=257  Identities=12%  Similarity=0.047  Sum_probs=172.2

Q ss_pred             eEEEEecCCCCcccchhcccCC---ccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCD---NEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIA   62 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~---~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~   62 (306)
                      .|++..|+.+|-...+..+..+   ....-...|.++.           ++.+|.       .|++.+++.+.   ++++
T Consensus        92 ~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~---~~~k  168 (396)
T PRK09147         92 QVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVW---ARTQ  168 (396)
T ss_pred             eEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHh---hccE
Confidence            6888899998877776666554   3222223344433           233332       36788888776   3678


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc--ccc-c---ccC-----CCCCcEEEecccc
Q 021893           63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR--MLA-S---DWE-----EVRPDMVILGKAL  131 (306)
Q Consensus        63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~--~~~-~---~~~-----~~~~d~~s~sK~~  131 (306)
                      +++++.++|++|.+ .+++.+++|.++|++|+++||+||+|..+.+.+.  ..+ .   ...     +....+.||||.+
T Consensus       169 ~i~l~nP~NPTG~~-~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~  247 (396)
T PRK09147        169 LLFVCSPGNPTGAV-LPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRS  247 (396)
T ss_pred             EEEEcCCCCCcCcc-CCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEecccccc
Confidence            88888889999965 5899999999999999999999999997644432  111 0   011     1122344999988


Q ss_pred             c-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCcee
Q 021893          132 G-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVK  209 (306)
Q Consensus       132 ~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~  209 (306)
                      + +|+ |+||+++++++++.+.......+++.+.+.+.++.+++..-. -.+..+.++++++.+.+.|.+.   +   ..
T Consensus       248 ~~~Gl-RiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~---~---~~  320 (396)
T PRK09147        248 NVPGL-RSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV---L---DV  320 (396)
T ss_pred             CCccc-eeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh---c---CC
Confidence            6 899 999999999998887654433445566777766665552110 0112344444445555554442   1   12


Q ss_pred             eEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccCC------------CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          210 EVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------------DTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       210 ~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~------------~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      ..+..|.++|+.++     ....++++.|+ ++||.+.|+.            .+++|++.  ..+++++++++++|+++
T Consensus       321 ~~p~~g~f~~~~~~-----~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~--~~~~~~l~~~l~rl~~~  393 (396)
T PRK09147        321 QLPDAGFYLWAKVP-----GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIAL--VAPLAECVEAAERIVDF  393 (396)
T ss_pred             CCCCeeEEEEEECC-----CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEe--cCCHHHHHHHHHHHHHH
Confidence            34567889999876     13567888886 6799997751            47899994  45788999999999987


Q ss_pred             Hh
Q 021893          277 LE  278 (306)
Q Consensus       277 l~  278 (306)
                      ++
T Consensus       394 ~~  395 (396)
T PRK09147        394 CR  395 (396)
T ss_pred             hc
Confidence            75

>PRK06225 aspartate aminotransferase; Provisional

Probab=99.90  E-value=3.2e-22  Score=181.64  Aligned_cols=219  Identities=17%  Similarity=0.246  Sum_probs=154.7

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccccc-CCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW-EEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~-~~~~~d~  124 (306)
                      |++.+++.++   ++++++++++++|++|.. .+.+.+++|.++|+++|+++|+||+|.+|.. +....... .....++
T Consensus       146 d~~~l~~~~~---~~~~~v~l~~p~NptG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~i~~  220 (380)
T PRK06225        146 TPELVKENMD---ENTRLIYLIDPLNPLGSS-YTEEEIKEFAEIARDNDAFLLHDCTYRDFAR-EHTLAAEYAPEHTVTS  220 (380)
T ss_pred             CHHHHHhhcC---CCceEEEEeCCCCCCCcC-CCHHHHHHHHHHHHHCCcEEEEehhHHHHhc-cCCchhhcCCCCEEEE
Confidence            6788888886   467888777778888865 4788999999999999999999999987632 22111111 1223346


Q ss_pred             EEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHH----HHHHHHHHHHHHH
Q 021893          125 VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERS----AHLGEELRQHLFK  199 (306)
Q Consensus       125 ~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~----~~~~~~l~~~L~~  199 (306)
                      .||||.++ +|+ |+||+++++++++.++... ...++.+.+++.++..+++..  +++.+++    +++.+.+.+.|++
T Consensus       221 ~s~SK~~g~~G~-RiG~i~~~~~l~~~~~~~~-~~~~~~~~~~~~~a~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~  296 (380)
T PRK06225        221 YSFSKIFGMAGL-RIGAVVATPDLIEVVKSIV-INDLGTNVIAQEAAIAGLKVK--DEWIDRIRRTTFKNQKLIKEAVDE  296 (380)
T ss_pred             eechhhcCCccc-eeEEEecCHHHHHHHHHHH-hcccCCCHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHh
Confidence            69999998 899 9999999999998876532 234566777777777666532  2233333    3444444445544


Q ss_pred             HHhhCCCc-eeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------CCCEEEEeCCCCCCHHHHHHHHH
Q 021893          200 IQQQFPNY-VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLSISSNELQEGSK  271 (306)
Q Consensus       200 ~~~~~~~~-~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~~lRi~~~~~~t~~~i~~~~~  271 (306)
                      +    ++. ....+..|.++|+.++..  ..+..++++.|.++||.+.++       +.+++|++.  ..++++++++++
T Consensus       297 ~----~~~~~~~~~~~g~~~~~~~~~~--~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~--~~~~e~l~~~~~  368 (380)
T PRK06225        297 I----EGVFLPVYPSHGNMMVIDISEA--GIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSF--SIPREQVEVFCE  368 (380)
T ss_pred             C----cCCccccCCCCCeEEEEEcccc--cCCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEe--CCCHHHHHHHHH
Confidence            3    111 122345677888887642  246788999999999999874       346899994  568999999999


Q ss_pred             HHHHHHhhhcC
Q 021893          272 ALHDVLELDLP  282 (306)
Q Consensus       272 ~l~~~l~~~~~  282 (306)
                      +|+++++ .++
T Consensus       369 ~l~~~~~-~~~  378 (380)
T PRK06225        369 EFPDVVE-TLR  378 (380)
T ss_pred             HHHHHHH-Hhh
Confidence            9999998 654

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=99.90  E-value=1.9e-22  Score=183.26  Aligned_cols=257  Identities=15%  Similarity=0.222  Sum_probs=168.2

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL   65 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~   65 (306)
                      .|++..|+-+|-...+..+..+.+..-...|.++.           +..+|.       .|++++++.+.   +++++++
T Consensus        93 ~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~  169 (383)
T TIGR03540        93 EVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA---KKAKLMF  169 (383)
T ss_pred             eEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcc---ccceEEE
Confidence            46666777777666555554433322222233332           122222       26788888776   4688888


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-cccc-ccC---CCCCcEEEeccccc-CCcccce
Q 021893           66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLAS-DWE---EVRPDMVILGKALG-GGVIPVS  139 (306)
Q Consensus        66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~-~~~---~~~~d~~s~sK~~~-~G~~~~g  139 (306)
                      +++++|++|.. .+.+.+++|.++|++||+++|+||+|.++.+.+. ..+. ...   .....+.||||.++ +|+ |+|
T Consensus       170 i~~P~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~Gl-RiG  247 (383)
T TIGR03540       170 INYPNNPTGAV-APLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGW-RIG  247 (383)
T ss_pred             EeCCCCCcCcc-CCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccc-eee
Confidence            88788999955 5899999999999999999999999997644432 1111 111   22234559999997 899 999


Q ss_pred             eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893          140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF  217 (306)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~  217 (306)
                      |+++++++++.+...........+.+.+.++..+++....  ++..+.++++++.+.+.|++.     +.....+..|.+
T Consensus       248 ~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-----~~~~~~~~~~~~  322 (383)
T TIGR03540       248 MAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKI-----GIDVEKPKATFY  322 (383)
T ss_pred             EEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-----CCEecCCCcceE
Confidence            9999999988776433223334455666666666643211  223445555566666666553     122233445777


Q ss_pred             EEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          218 NAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       218 ~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      +|+.+++   ..+..++++.|+ ++||.+.|+      +.+++|++.  ..+++++++++++|++
T Consensus       323 ~~~~l~~---~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~--~~~~~~l~~~l~~l~~  382 (383)
T TIGR03540       323 VWVPVPE---GYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISL--TVPDERLEEAVARIKK  382 (383)
T ss_pred             EEEECCC---CCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEe--cCCHHHHHHHHHHHhh
Confidence            8888764   346778999876 679999985      257999995  4678888888888764

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PRK07179 hypothetical protein; Provisional

Probab=99.90  E-value=6e-22  Score=181.34  Aligned_cols=257  Identities=16%  Similarity=0.212  Sum_probs=178.2

Q ss_pred             eEEEEecCCCCcccchhcccCCcc--ccccCCC--C-----CCC--cccccCCCHHHHHHHHHhcCCcEEEEEEccccCC
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNE--AIRGFGP--L-----LPG--HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGE   72 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~--~~~~~~~--~-----~~~--~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~   72 (306)
                      +++++++|+.+...+..++..+..  ....+..  .     ..+  +..++++|++.|+++++++  ++++|++++++++
T Consensus       116 ~~~~~~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~--~~~lV~v~~v~n~  193 (407)
T PRK07179        116 SCLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRHNDVDHLRRQIERH--GPGIIVVDSVYST  193 (407)
T ss_pred             cEEEECCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecCCCHHHHHHHHHhc--CCeEEEECCCCCC
Confidence            567788888876655544443221  1111000  0     011  2455668999999999852  4789999999999


Q ss_pred             CCcccCChhHHHHHHHHHHHcCCEEEEehhhhc--ccccccccccccCCC--CCcEE--EecccccCCcccceeeEeCHH
Q 021893           73 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG--LARSGRMLASDWEEV--RPDMV--ILGKALGGGVIPVSAVLADKE  146 (306)
Q Consensus        73 ~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g--~~~~g~~~~~~~~~~--~~d~~--s~sK~~~~G~~~~g~~~~~~~  146 (306)
                      +|.+.+    +++|.++|++||++||+||+|+.  ++..|..+ +..+++  .+|++  |++|+++  . ++|+++++++
T Consensus       194 tG~i~p----l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~-~~~~~~~~~vdi~~~S~sK~~g--~-~~G~l~~~~~  265 (407)
T PRK07179        194 TGTIAP----LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGL-VAELGLTSRVHFITASLAKAFA--G-RAGIITCPRE  265 (407)
T ss_pred             CCcccc----HHHHHHHHHHcCCEEEEECcccccCcCCCCCch-HHhcCCCCCCCEEEeechHhhh--c-cCeEEEeCHH
Confidence            999998    99999999999999999999982  34445433 333443  23654  6789996  3 6888999998


Q ss_pred             HHhhcCCCCcc--CCCCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893          147 VMLCIQPGEHG--STFGGNPLASAVAIASLDVIRDE-KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD  223 (306)
Q Consensus       147 ~~~~~~~~~~~--~~~~~~~~~~~aa~~al~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~  223 (306)
                      +++.+......  ...+.++..++++.++++.+... +..++++++++++++.|++++  +     .+.+.+.++++.++
T Consensus       266 ~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~g--~-----~v~~~~~i~~l~~~  338 (407)
T PRK07179        266 LAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSELG--Y-----NIRSESQIIALETG  338 (407)
T ss_pred             HHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC--C-----CCCCCCCEEEEEeC
Confidence            87766532111  11222345555566777777553 467889999999999998862  1     12245677777765


Q ss_pred             cCCChhhHHHHHHHHHHCCceec----cC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          224 KTALPVSAYDICLKMKERGILAK----PT---HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       224 ~~~~~~~~~~~~~~l~~~Gi~~~----~~---~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .   ......+.+.|.++||.+.    |.   ..+.+|++++..+|++|+++++++|+++++ +.
T Consensus       339 ~---~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~-~~  399 (407)
T PRK07179        339 S---ERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARD-EV  399 (407)
T ss_pred             C---HHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH-hh
Confidence            3   2356778899999999733    32   357899999999999999999999999888 53

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=99.90  E-value=4.1e-22  Score=183.99  Aligned_cols=267  Identities=22%  Similarity=0.244  Sum_probs=199.3

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCC----CHHHHHHHHHhcCCcEEEEEEc
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFG----DITALEKIFKESGDQIAGFLFE   67 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~----d~~~le~~i~~~~~~~~~v~v~   67 (306)
                      ..|++.+|+.++-...+..+..+.+......|.|++           ++.+|.+    |++.||+.++++  ++++++++
T Consensus       156 ~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~--~~k~~y~~  233 (459)
T COG1167         156 EQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQW--KPKAVYVT  233 (459)
T ss_pred             CeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhc--CCcEEEEC
Confidence            369999999999888888888776666666677766           2444443    799999999975  78899998


Q ss_pred             cc-cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc----cccccCCCCCcEEEecccccCCcccceeeE
Q 021893           68 PI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM----LASDWEEVRPDMVILGKALGGGVIPVSAVL  142 (306)
Q Consensus        68 ~~-~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~----~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~  142 (306)
                      |. +|++| .+.+.+.-++|.++|++||+++|.|+.|+.+.+.+..    .+.+..+....+.||||.+.+|+ |+||++
T Consensus       234 P~~qNPtG-~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~Pgl-RlG~vv  311 (459)
T COG1167         234 PTFQNPTG-VTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAPGL-RLGYVV  311 (459)
T ss_pred             CCCCCCCC-CccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhccccc-ceeeee
Confidence            85 66677 4568999999999999999999999999987555442    22344455666779999999999 999999


Q ss_pred             eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH---hh-CC-CceeeEEEeeeE
Q 021893          143 ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQ---QQ-FP-NYVKEVRGRGLF  217 (306)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~-~~-~~~~~~~~~g~~  217 (306)
                      +++++++.+....+....+.+.+.+.+...-+.   +..+.+++++.++.++++.+.+.   .. .+ ......+..|++
T Consensus       312 ~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~---~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~f  388 (459)
T COG1167         312 APPELIEKLLRLKQAADLGPSSLSQAALAAFLL---SGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLF  388 (459)
T ss_pred             CCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHH---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEE
Confidence            999999988877677777777777666655443   22244444444444433333221   11 12 233455567999


Q ss_pred             EEEEEecCCChhhHHHHHHHHHHCCceecc-C--------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          218 NAVEFDKTALPVSAYDICLKMKERGILAKP-T--------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       218 ~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~-~--------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +|+.+++   ..+..++.+.++++|+.+.| +        ..+++|++++ ..+.+++++++.+|.+.+. +.
T Consensus       389 lwl~l~~---~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s-~~~~e~i~~gi~~l~~~~~-~~  456 (459)
T COG1167         389 LWLELPE---GIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFS-SPSEEEIEEGIKRLAALLR-EA  456 (459)
T ss_pred             EEEEcCC---CCCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcC-CCCHHHHHHHHHHHHHHHH-HH
Confidence            9999996   56788999999999999998 3        2458999975 4468999999999999987 54

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=99.90  E-value=3.8e-22  Score=182.82  Aligned_cols=224  Identities=22%  Similarity=0.295  Sum_probs=162.4

Q ss_pred             ccccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cc-cccccccccc
Q 021893           40 LKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GL-ARSGRMLASD  116 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~-~~~g~~~~~~  116 (306)
                      ..++++|++.+++.++... +++++|++++++|++|.+.+    +++|.++|++||+++|+||+|+ |+ +..|..+ ..
T Consensus       157 ~~~~~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~-~~  231 (410)
T PRK13392        157 QVFRHNDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAP----IEAICDLADRYNALTYVDEVHAVGLYGARGGGI-AE  231 (410)
T ss_pred             EEEeCCCHHHHHHHHHhccCCCCEEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCccccCcCCCCCch-hh
Confidence            4456788989998887643 47899999999999999988    9999999999999999999998 53 4555443 23


Q ss_pred             cCCC--CCcEE--EecccccCCcccceeeEeCHHHHhhcCCCCcc--CCCCCCHHHHHHHHHHHHHHhhc-cHHHHHHHH
Q 021893          117 WEEV--RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHG--STFGGNPLASAVAIASLDVIRDE-KLAERSAHL  189 (306)
Q Consensus       117 ~~~~--~~d~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~aa~~al~~~~~~-~~~~~~~~~  189 (306)
                      ..++  .+|++  |+||+++.   ..||+++++++++.++.....  .+...+++.++++.++++.+... ...++++++
T Consensus       232 ~~~~~~~~div~~tlsK~~g~---~GG~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~  308 (410)
T PRK13392        232 RDGLMDRIDMIQGTLAKAFGC---LGGYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDR  308 (410)
T ss_pred             hccCCCCCcEEEEEChHhhhc---ccchhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            3232  34555  99999972   114588899988866543322  23345667788888999877643 245667788


Q ss_pred             HHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC-------CCCEEEEeCCCCC
Q 021893          190 GEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT-------HDTIVRLTPPLSI  261 (306)
Q Consensus       190 ~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~~~~lRi~~~~~~  261 (306)
                      ++++++.|++++..      ..+..+.++.+.+..   .....++++.|+ ++||.+.+.       +..++|++++..+
T Consensus       309 ~~~l~~~L~~~g~~------~~~~~~~~~~i~~~~---~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~  379 (410)
T PRK13392        309 VAALKAKLNANGIP------VMPSPSHIVPVMVGD---PTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLH  379 (410)
T ss_pred             HHHHHHHHHHcCCC------CCCCCCCEEEEEeCC---HHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCC
Confidence            88888888875322      112344555554432   234678999997 579999863       3368999999999


Q ss_pred             CHHHHHHHHHHHHHHHhhhc
Q 021893          262 SSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       262 t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +++|++.++++|+++++ ++
T Consensus       380 t~edid~l~~aL~~~~~-~~  398 (410)
T PRK13392        380 DDEDIDALVAALVAIWD-RL  398 (410)
T ss_pred             CHHHHHHHHHHHHHHHH-Hc
Confidence            99999999999999988 64

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=99.90  E-value=2e-22  Score=183.20  Aligned_cols=257  Identities=14%  Similarity=0.196  Sum_probs=168.1

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL   65 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~   65 (306)
                      .|++..|+.+|-......+..+.+..-...|.++.           ++.+|.       .|++++++.+.   +++++++
T Consensus        95 ~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~  171 (385)
T PRK09276         95 EVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA---KKAKLMF  171 (385)
T ss_pred             cEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc---ccceEEE
Confidence            36666888877666655554443332222344433           122222       25777777765   4688888


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-cc---CCCCCcEEEeccccc-CCcccce
Q 021893           66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DW---EEVRPDMVILGKALG-GGVIPVS  139 (306)
Q Consensus        66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~---~~~~~d~~s~sK~~~-~G~~~~g  139 (306)
                      +++++|++|.+ .+.+.+++|.++|++|++++|+||+|.++...+... +. ..   .+....+.||||.++ +|+ |+|
T Consensus       172 l~~p~NPtG~~-~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-RiG  249 (385)
T PRK09276        172 INYPNNPTGAV-ADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGW-RIG  249 (385)
T ss_pred             EeCCCCCCCCC-CCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcch-hhe
Confidence            88889999965 589999999999999999999999999764443211 11 11   122344569999997 899 999


Q ss_pred             eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893          140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF  217 (306)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~  217 (306)
                      |+++++++++.+...........+.+.+.++..+++....  ++..++++++++.+.+.|++.     +.....+..|.+
T Consensus       250 ~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-----~~~~~~~~~~~~  324 (385)
T PRK09276        250 FAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL-----GLEVEPPKATFY  324 (385)
T ss_pred             eeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC-----CCcccCCCcceE
Confidence            9999999988876533323333455666666666642111  223445555556666666553     122223345677


Q ss_pred             EEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          218 NAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       218 ~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      +|+.+++   ..+..++++.|+ ++||.+.|+      +++++|++.  ..+++++.+++++|.+
T Consensus       325 ~~v~~~~---~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~--~~~~~~l~~~l~~l~~  384 (385)
T PRK09276        325 VWAPVPK---GYTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIAL--TVPDERIEEAVERIKK  384 (385)
T ss_pred             EEEECCC---CCCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEe--CCCHHHHHHHHHHHhh
Confidence            8888764   346778999887 579999986      257999995  4678888888888754

>PRK08912 hypothetical protein; Provisional

Probab=99.90  E-value=2.6e-22  Score=182.66  Aligned_cols=263  Identities=19%  Similarity=0.222  Sum_probs=176.1

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC------CCHHHHHHHHHhcCCcEEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF------GDITALEKIFKESGDQIAGFLF   66 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~------~d~~~le~~i~~~~~~~~~v~v   66 (306)
                      .|++..|+.++..........+....-...|.++.           ++.++.      .|++.+++.+.   ++++++++
T Consensus        89 ~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l  165 (387)
T PRK08912         89 EVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFS---PRTKAVLL  165 (387)
T ss_pred             cEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhC---ccceEEEE
Confidence            68888888888765555554433322222233332           122332      26788988886   46788888


Q ss_pred             ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-c-cccCC---CCCcEEEeccccc-CCccccee
Q 021893           67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-A-SDWEE---VRPDMVILGKALG-GGVIPVSA  140 (306)
Q Consensus        67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~-~~~~~---~~~d~~s~sK~~~-~G~~~~g~  140 (306)
                      +.++|++|.+ .+.+.+++|.++|++|++++|+||+|.++...+..+ + ....+   ....+.|+||.++ +|+ |+||
T Consensus       166 ~~p~NPtG~~-~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl-RiG~  243 (387)
T PRK08912        166 NNPLNPAGKV-FPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGW-KVGF  243 (387)
T ss_pred             eCCCCCcCcc-cCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCc-eeEE
Confidence            8889999965 578999999999999999999999998764443211 1 11112   2233458999999 999 9999


Q ss_pred             eEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893          141 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN  218 (306)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~  218 (306)
                      +++++++++.+........++.++..+.++..++....+  ++..++++++.+.+.+.|+..+     .....+..|.++
T Consensus       244 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~g~~~l  318 (387)
T PRK08912        244 VCAAPPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRIG-----FPVLPSQGTYFL  318 (387)
T ss_pred             EecCHHHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-----CcccCCCcceEE
Confidence            999999988876544444455566566666555532111  2345666666666766666542     222234456778


Q ss_pred             EEEEecCCChhhHHHHHHHHH-HCCceeccC--------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          219 AVEFDKTALPVSAYDICLKMK-ERGILAKPT--------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       219 ~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~--------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      |+.++......+..++++.|+ ++||.+.|+        ..+++|++..  .+++++++++++|.+.++
T Consensus       319 ~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~--~~~~~l~~~l~rl~~~l~  385 (387)
T PRK08912        319 TVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFA--KRDATLDEAVERLAAARR  385 (387)
T ss_pred             EecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEe--CCHHHHHHHHHHHHHHHh
Confidence            888764211235778999986 569998874        1479999954  568999999999998876

>PRK06290 aspartate aminotransferase; Provisional

Probab=99.90  E-value=2.1e-22  Score=184.00  Aligned_cols=267  Identities=15%  Similarity=0.191  Sum_probs=176.7

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL   65 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~   65 (306)
                      .|++.+|+-++-...+.....+....-...|.|+.           ++.+|.       .|++.+++.+.   +++++++
T Consensus       108 ~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~  184 (410)
T PRK06290        108 EVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIK---EKAKLLY  184 (410)
T ss_pred             eEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhc---ccceEEE
Confidence            58888888888666655555443333233344443           122222       26888888776   4688888


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccC---CCCCcEEEeccccc-CCccccee
Q 021893           66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWE---EVRPDMVILGKALG-GGVIPVSA  140 (306)
Q Consensus        66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~---~~~~d~~s~sK~~~-~G~~~~g~  140 (306)
                      +++++|++|.+ .+.+.+++|.++|++||++||+||+|.++.+.+...++ ...   +....+.||||.++ +|+ |+||
T Consensus       185 l~nP~NPTG~v-~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~Gl-RiG~  262 (410)
T PRK06290        185 LNYPNNPTGAV-ATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGW-RLAF  262 (410)
T ss_pred             EECCCCCCCcC-CCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchh-heEe
Confidence            88779999965 58999999999999999999999999976443322111 111   12233459999997 999 9999


Q ss_pred             eEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893          141 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA  219 (306)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~  219 (306)
                      +++++++++.+.........+.+.+.+.++..+++... .++..++++++++.+.+.|++.     +.....+..|.++|
T Consensus       263 ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~p~g~f~l~  337 (410)
T PRK06290        263 VVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV-----GFKAEMPGGTFYLY  337 (410)
T ss_pred             EEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC-----CCeecCCCeeeEEE
Confidence            99999998887654433444445566666666664311 1224555566666666666654     12223345677778


Q ss_pred             EEEecCCC----hhhHHHHHHHHHHCCc-eeccC--CCCEEEEeCCC-CCCHHHHHHHHHHHHHHHhhhc
Q 021893          220 VEFDKTAL----PVSAYDICLKMKERGI-LAKPT--HDTIVRLTPPL-SISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       220 i~~~~~~~----~~~~~~~~~~l~~~Gi-~~~~~--~~~~lRi~~~~-~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +.++....    ..+..++++.|+++|+ .+.|+  ..+++|++... ..++++.++++++|++.|. ++
T Consensus       338 v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~-~~  406 (410)
T PRK06290        338 VKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLS-DV  406 (410)
T ss_pred             EECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHHHh-hc
Confidence            88764210    0257789999999864 44454  24689999532 2478889999999999988 54

>PRK12414 putative aminotransferase; Provisional

Probab=99.89  E-value=4.8e-22  Score=180.61  Aligned_cols=259  Identities=14%  Similarity=0.145  Sum_probs=170.9

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC------CCHHHHHHHHHhcCCcEEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF------GDITALEKIFKESGDQIAGFLF   66 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~------~d~~~le~~i~~~~~~~~~v~v   66 (306)
                      .|++..|+.+|-...+.++..+.+..-...|.++.           +..++.      .|++.|++.++   ++++++++
T Consensus        92 ~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~---~~~~~v~i  168 (384)
T PRK12414         92 EVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT---PRTRMIIV  168 (384)
T ss_pred             cEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcC---cccEEEEE
Confidence            57777887777655555554433222222233222           122222      26888888886   46888888


Q ss_pred             ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-ccCCC---CCcEEEeccccc-CCccccee
Q 021893           67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWEEV---RPDMVILGKALG-GGVIPVSA  140 (306)
Q Consensus        67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~~~~---~~d~~s~sK~~~-~G~~~~g~  140 (306)
                      ++++|++|.+ .+++.+++|.++|++||+++|+||+|..+...+... +. ...+.   ...+.||||.++ +|+ |+||
T Consensus       169 ~~p~NPTG~~-~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGl-RiG~  246 (384)
T PRK12414        169 NTPHNPSATV-FSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGW-RVGY  246 (384)
T ss_pred             cCCCCCCCcC-CCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccc-eEEE
Confidence            8889999965 578999999999999999999999999765444321 11 11111   223449999998 999 9999


Q ss_pred             eEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893          141 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA  219 (306)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~  219 (306)
                      +++++++++.+........++.+.+.+.++...++.-. ..+..+.++++++.+.+.|++.+     .....+..|.++|
T Consensus       247 ~v~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-----~~~~~~~gg~~~~  321 (384)
T PRK12414        247 CLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGSR-----FELLPSEGSFFML  321 (384)
T ss_pred             EecCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhCC-----CeecCCCcceEEE
Confidence            99999998887765444566777788877776664311 11244566666666666666541     2223344667777


Q ss_pred             EEEecCCChhhHHHHH-HHHHHCCceeccCC--------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          220 VEFDKTALPVSAYDIC-LKMKERGILAKPTH--------DTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       220 i~~~~~~~~~~~~~~~-~~l~~~Gi~~~~~~--------~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      +.++... .....+++ +.|.++||.+.|+.        .+++|++..  .+++++++++++|.+
T Consensus       322 ~~~~~~~-~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~--~~~~~~~~~~~rl~~  383 (384)
T PRK12414        322 ARFRHFS-DESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFS--KDDATLVEGARRLCS  383 (384)
T ss_pred             EcccccC-CCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence            7765311 12344566 55667899999851        468999954  578999999998864

>PRK08960 hypothetical protein; Provisional

Probab=99.89  E-value=9.2e-22  Score=178.99  Aligned_cols=259  Identities=16%  Similarity=0.108  Sum_probs=170.9

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL   65 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~   65 (306)
                      .|++..|+.+|-...+.....+.+..-...|.++.           +..++.       .|++.+++.++   +++++++
T Consensus        94 ~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~~~i~  170 (387)
T PRK08960         94 RILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWN---ADTVGAL  170 (387)
T ss_pred             hEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhC---ccceEEE
Confidence            46677777777655555444433322222333332           112221       26888888877   4567777


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc---EEEeccccc-CCcccceee
Q 021893           66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD---MVILGKALG-GGVIPVSAV  141 (306)
Q Consensus        66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d---~~s~sK~~~-~G~~~~g~~  141 (306)
                      +..++|++|.+ .+.+.+++|+++|++||+++|+||+|.++...+...  ......++   +.|+||.++ +|+ |+||+
T Consensus       171 i~~p~NPtG~~-~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~--~~~~~~~~vi~~~S~SK~~g~~Gl-RiG~~  246 (387)
T PRK08960        171 VASPANPTGTL-LSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAA--SVLEVDDDAFVLNSFSKYFGMTGW-RLGWL  246 (387)
T ss_pred             EECCCCCCCcC-cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC--ChhhccCCEEEEeecccccCCccc-EEEEE
Confidence            77778899965 579999999999999999999999998764433221  11222333   348999998 999 99999


Q ss_pred             EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCcee-eEEEeeeE
Q 021893          142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVK-EVRGRGLF  217 (306)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~g~~  217 (306)
                      ++++++++.+.........+.+.+.+.++.++++.-..   .+..+.++++++.+.+.|++.     +... ..+..|.+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-----~~~~~~~p~g~~f  321 (387)
T PRK08960        247 VAPPAAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL-----GFGIAVEPQGAFY  321 (387)
T ss_pred             EcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcCCcCCCeeEE
Confidence            99999988876544444556677887777777642100   123344455555555555543     1221 23556888


Q ss_pred             EEEEEecCCChhhHHHHHHHHH-HCCceeccC-------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          218 NAVEFDKTALPVSAYDICLKMK-ERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       218 ~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +|+.+++.  ..+..++++.|+ ++||.+.|+       .++++|++..  .+.+.+..++++|.++++
T Consensus       322 ~~~~~~~~--~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~--~~~~~l~~al~~l~~~~~  386 (387)
T PRK08960        322 LYADISAF--GGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYT--QSLPRLQEAVERIARGLR  386 (387)
T ss_pred             EEEecccc--CCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHh
Confidence            89888641  134678888876 579999985       2469999965  478889999999988765

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=99.89  E-value=7.5e-22  Score=177.22  Aligned_cols=257  Identities=15%  Similarity=0.116  Sum_probs=168.5

Q ss_pred             eEEEEecCCCCcccchhcccCCc---cccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDN---EAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIA   62 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~---~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~   62 (306)
                      .|+..+|+-++-...+..+..+.   ...-...|.++.           ++.++.       -|++++++++++   +++
T Consensus        62 ~Iiit~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~---~~~  138 (350)
T TIGR03537        62 QVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILE---ETK  138 (350)
T ss_pred             cEEEcCChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhh---ccE
Confidence            57777777777666555554432   122222344433           122222       178999998873   688


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC--CCCCcEEEeccccc-CCcccce
Q 021893           63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE--EVRPDMVILGKALG-GGVIPVS  139 (306)
Q Consensus        63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~--~~~~d~~s~sK~~~-~G~~~~g  139 (306)
                      ++++++++|++|.. .+.+.+++|.++|++||+++|+||+|..+...+...+....  +....+.|+||.++ +|+ |+|
T Consensus       139 ~i~i~~p~NPtG~~-~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~Gl-RiG  216 (350)
T TIGR03537       139 IVWINYPHNPTGAT-APRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGY-RSG  216 (350)
T ss_pred             EEEEeCCCCCcCcc-cCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccc-cce
Confidence            88888889999955 58999999999999999999999999865332222111111  11223448999997 899 999


Q ss_pred             eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893          140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN  218 (306)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~  218 (306)
                      |+++++++++.+.........+.+.+.+.++.+++..-. ..+...+++++.+.+.+.|+..+     .....+..|.++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~g-----~~~~~~~g~~~~  291 (350)
T TIGR03537       217 FVAGDEKLISFLRKLRANFGVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKVG-----LEYLYPDATFYL  291 (350)
T ss_pred             eeecCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCC-----CcccCCCeEEEE
Confidence            999999988877754333334445555566555543100 01234455555555555555431     222334567778


Q ss_pred             EEEEecCCChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          219 AVEFDKTALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       219 ~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      |+.++.   ..++.++++.|.++||.+.|+      ..+++|++.  ..+++++++++++|++
T Consensus       292 ~~~~~~---~~~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~--~~~~~~~~~~l~~~~~  349 (350)
T TIGR03537       292 WVKVPS---GIDAKDYALRLLENGIVVAPGENFGSGEEGYVRVAL--VPTLEECEEALRLWER  349 (350)
T ss_pred             EEECCC---CCCHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEe--cCCHHHHHHHHHHHhc
Confidence            888874   346788999999999999874      257899994  4678999999998865

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=99.89  E-value=3.3e-22  Score=180.73  Aligned_cols=253  Identities=16%  Similarity=0.125  Sum_probs=166.7

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-----CCHHHHHHHHHhcCCcEEEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-----GDITALEKIFKESGDQIAGFLF   66 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-----~d~~~le~~i~~~~~~~~~v~v   66 (306)
                      ..|++..|+.++-......+..+....-...|.|+.           ++.++.     .|+++++++++++  +++++++
T Consensus        89 ~~I~it~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~--~~~~i~l  166 (368)
T PRK03317         89 ENVWAANGSNEILQQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEH--RPDVVFL  166 (368)
T ss_pred             hhEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhcc--CCCEEEE
Confidence            357777777777666666555543332223344432           111221     2789999998753  5667777


Q ss_pred             ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE---Eeccccc-CCcccceeeE
Q 021893           67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV---ILGKALG-GGVIPVSAVL  142 (306)
Q Consensus        67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~---s~sK~~~-~G~~~~g~~~  142 (306)
                      ++++|++|...+    .+++.++|+.++++||+||+|++|++.|........+..++++   ||||.++ +|+ |+||++
T Consensus       167 ~~p~NPtG~~~~----~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~Gl-RiG~~~  241 (368)
T PRK03317        167 TSPNNPTGTALP----LDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGG-RLGYLA  241 (368)
T ss_pred             eCCCCCCCCCCC----HHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchh-hhhhhh
Confidence            788999998876    6666667776689999999999886555432222222334554   9999998 899 999999


Q ss_pred             eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893          143 ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE  221 (306)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~  221 (306)
                      +++++++.+....  .++..+++++.++.++++.... .+..+++++..+.+.+.|+..     +........+.+++..
T Consensus       242 ~~~~~~~~l~~~~--~~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-----g~~~~~~~~~~~~~~~  314 (368)
T PRK03317        242 AAPAVVDALRLVR--LPYHLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL-----GLRVAPSDANFVLFGR  314 (368)
T ss_pred             CCHHHHHHHHhcC--CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC-----CCEeCCCCCcEEEEec
Confidence            9999998887533  3567788888888888865322 112233444444455544442     1222222333333322


Q ss_pred             EecCCChhhHHHHHHHHHHCCceeccCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          222 FDKTALPVSAYDICLKMKERGILAKPTH-DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       222 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +.      +..++.+.|+++||.+.+.+ ++++|++.   .+.++++.+++.|++++.
T Consensus       315 ~~------~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~---~~~~~~~~~~~~l~~~~~  363 (368)
T PRK03317        315 FA------DRHAVWQGLLDRGVLIRDVGIPGWLRVTI---GTPEENDAFLAALAEVLA  363 (368)
T ss_pred             cC------CHHHHHHHHHHCCEEEEeCCCCCeEEEec---CCHHHHHHHHHHHHHHHH
Confidence            22      45789999999999998754 58999994   367889999999998876

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=99.89  E-value=1.9e-21  Score=176.68  Aligned_cols=222  Identities=24%  Similarity=0.277  Sum_probs=162.6

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c-cccccccccc-c
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLAS-D  116 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~-~  116 (306)
                      ..++.+|++.+++.++..++++++++++++++++|.+.+    +++|.++|++||+++|+||+|+ + ++..|..+.. .
T Consensus       148 ~~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~----l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~  223 (385)
T PRK05958        148 RRYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAP----LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEA  223 (385)
T ss_pred             EEeCCCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCC----HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhh
Confidence            445667999999999864345788899999999998877    9999999999999999999996 3 3333432211 0


Q ss_pred             cCCCCCc---EEEecccccCCcccceeeEeCHHHHhhcCCC--CccCCCCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHH
Q 021893          117 WEEVRPD---MVILGKALGGGVIPVSAVLADKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDE-KLAERSAHLG  190 (306)
Q Consensus       117 ~~~~~~d---~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aa~~al~~~~~~-~~~~~~~~~~  190 (306)
                      .....++   +.|+||++++   +.||++.++++++.+...  ....+...+++.++++.++++.+... ++.+++.+++
T Consensus       224 ~~~~~~~~i~~~s~sK~~~~---~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~  300 (385)
T PRK05958        224 GLAGEPDVILVGTLGKALGS---SGAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALI  300 (385)
T ss_pred             CCCCCCceEEEEechhhccc---CCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence            1122344   5699999972   226788898888776432  12223345677777888888877653 5778888899


Q ss_pred             HHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------CCCEEEEeCCCCCCH
Q 021893          191 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLSISS  263 (306)
Q Consensus       191 ~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~~lRi~~~~~~t~  263 (306)
                      +++.+.|++....      .....|.++++.++.   ..+..++++.|+++||.+.+.       +.+++|++++..+++
T Consensus       301 ~~l~~~L~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~  371 (385)
T PRK05958        301 ARLRAGLRALGFQ------LMDSQSAIQPLIVGD---NERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHTE  371 (385)
T ss_pred             HHHHHHHHHcCCC------cCCCCCCEEEEEeCC---HHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCCCH
Confidence            9999998876311      123456777877653   346778999999999999752       246899999988999


Q ss_pred             HHHHHHHHHHHHHH
Q 021893          264 NELQEGSKALHDVL  277 (306)
Q Consensus       264 ~~i~~~~~~l~~~l  277 (306)
                      ++++.++++|++++
T Consensus       372 ~~i~~~l~~l~~~~  385 (385)
T PRK05958        372 ADIDRLLEALAEAL  385 (385)
T ss_pred             HHHHHHHHHHHhcC
Confidence            99999999998753

>PRK09082 methionine aminotransferase; Validated

Probab=99.89  E-value=2.9e-22  Score=182.20  Aligned_cols=259  Identities=15%  Similarity=0.191  Sum_probs=173.0

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC------CCHHHHHHHHHhcCCcEEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF------GDITALEKIFKESGDQIAGFLF   66 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~------~d~~~le~~i~~~~~~~~~v~v   66 (306)
                      .|++..|+.++-..+..+...+.+..-...|.++.           ++.++.      .|++++++.++   ++++++++
T Consensus        93 ~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l  169 (386)
T PRK09082         93 EITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIS---PRTRLIIL  169 (386)
T ss_pred             cEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcC---ccceEEEE
Confidence            47777777777665555554433222222233322           223332      26888998886   46888888


Q ss_pred             ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-ccc-ccCCC---CCcEEEeccccc-CCccccee
Q 021893           67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LAS-DWEEV---RPDMVILGKALG-GGVIPVSA  140 (306)
Q Consensus        67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~-~~~~~---~~d~~s~sK~~~-~G~~~~g~  140 (306)
                      ++++|++|.. .+.+.+++|.++|++||+++|+||+|.++...+.. .+. ...+.   ...+.||||.++ +|+ |+||
T Consensus       170 ~~p~NPtG~~-~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~  247 (386)
T PRK09082        170 NTPHNPSGTV-WSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGW-KVGY  247 (386)
T ss_pred             eCCCCCCCcC-CCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhh-hhhh
Confidence            8889999965 47899999999999999999999999876443321 111 12222   223449999997 899 9999


Q ss_pred             eEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893          141 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN  218 (306)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~  218 (306)
                      +++++++++.++.......++.+.+.+.++...++....  +++.+.++++.+.+.+.|++..     ........|.++
T Consensus       248 iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-----~~~~~~~g~~~~  322 (386)
T PRK09082        248 CVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANSR-----FKLLPCEGTYFQ  322 (386)
T ss_pred             hhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCC-----CcccCCCeeEEE
Confidence            999999998887654445566777777776666542111  2234555666666666666531     222334567788


Q ss_pred             EEEEecCCChhhHHHHHHHH-HHCCceeccC--------CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          219 AVEFDKTALPVSAYDICLKM-KERGILAKPT--------HDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       219 ~i~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~--------~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      |+.+++.. ..+..++++.| .++||.+.|+        +.+++|++.  ..+++++++++++|++
T Consensus       323 ~~~~~~~~-~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~--~~~~~~l~~~~~rl~~  385 (386)
T PRK09082        323 LVDYSAIS-DLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCF--AKQEETLDAAAERLCQ  385 (386)
T ss_pred             EEeccccC-CCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEe--cCCHHHHHHHHHHHhh
Confidence            88876311 24577899987 4669998875        147899995  4578899999998864

>PRK08361 aspartate aminotransferase; Provisional

Probab=99.89  E-value=5.9e-22  Score=180.51  Aligned_cols=263  Identities=15%  Similarity=0.161  Sum_probs=171.4

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v   64 (306)
                      ..|++..|+.++....+.++..+....-...|.++.           +..+|.       .|++++++.++   ++++++
T Consensus        94 ~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~---~~~~~v  170 (391)
T PRK08361         94 DNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELIT---KRTRMI  170 (391)
T ss_pred             ccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc---cccEEE
Confidence            367788888777665555554433222222233222           122222       37899998887   457788


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-cccccC--CCCCcEEEeccccc-CCccccee
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWE--EVRPDMVILGKALG-GGVIPVSA  140 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~~--~~~~d~~s~sK~~~-~G~~~~g~  140 (306)
                      ++++++|++|.. .+.+.+++|.++|+++++++|+||+|.++...+.. .+....  .....+.|+||.++ +|+ |+||
T Consensus       171 ~i~~p~NPtG~~-~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~Gl-RiG~  248 (391)
T PRK08361        171 VINYPNNPTGAT-LDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGW-RLGF  248 (391)
T ss_pred             EEeCCCCCCCcC-cCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHh-hhhh
Confidence            888889999965 57889999999999999999999999876433321 111111  11223448999998 899 9999


Q ss_pred             eEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893          141 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL  216 (306)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~  216 (306)
                      +++++++++.+........++.+.+.+.++..+++....    ++..+.++++.+.+.+.|+.+    ++.....+..|.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~~~~~~~p~g~~  324 (391)
T PRK08361        249 VIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEM----PHIKVFEPKGAF  324 (391)
T ss_pred             hccCHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhC----CCCeecCCCEEE
Confidence            999999888765433333445566777777666643211    122344444445455555442    222223345577


Q ss_pred             EEEEEEecCCChhhHHHHHHHHHH-CCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          217 FNAVEFDKTALPVSAYDICLKMKE-RGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       217 ~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ++|+.++..  ..+..++++.|++ +||.+.|+      +.+++|++..  .+++++++++++|++.++
T Consensus       325 ~~~~~l~~~--~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~~l~  389 (391)
T PRK08361        325 YVFANIDET--GMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYA--TSKEKLIEAMERMEKALE  389 (391)
T ss_pred             EEEEECCCC--CCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHh
Confidence            788888631  2457788888875 69999875      2479999954  578899999999998887

>PLN02483 serine palmitoyltransferase

Probab=99.89  E-value=1.7e-21  Score=181.18  Aligned_cols=227  Identities=16%  Similarity=0.183  Sum_probs=162.6

Q ss_pred             cccccCCCHHHHHHHHHhc----------CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c-c
Q 021893           39 HLKVDFGDITALEKIFKES----------GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-L  106 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~----------~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~  106 (306)
                      +..++++|++++++.+++.          +.+..+|+++++.+++|.+.+    +++|.++|++||++||+||+|+ | +
T Consensus       209 v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~----l~~I~~la~~~~~~livDEa~s~g~~  284 (489)
T PLN02483        209 IRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCK----LPEIVAVCKKYKAYVYLDEAHSIGAV  284 (489)
T ss_pred             EEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccC----HHHHHHHHHHcCCEEEEECcCccCcc
Confidence            4678889999999888742          112358889999999999988    9999999999999999999997 2 3


Q ss_pred             cccccccccccCCCC---CcE--EEecccccCCcccceeeEeCHHHHhhcCCCCccCCC--CCCHHHHHHHHHHHHHHhh
Q 021893          107 ARSGRMLASDWEEVR---PDM--VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTF--GGNPLASAVAIASLDVIRD  179 (306)
Q Consensus       107 ~~~g~~~~~~~~~~~---~d~--~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~aa~~al~~~~~  179 (306)
                      +..|... .+.+++.   .|+  .||||++++   ..||+++++++++.++.......+  ..++..++++.++++.+..
T Consensus       285 G~~G~g~-~~~~~v~~~~~dI~~~SfSKs~g~---~GG~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~  360 (489)
T PLN02483        285 GKTGRGV-CELLGVDPADVDIMMGTFTKSFGS---CGGYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILG  360 (489)
T ss_pred             CCCCCch-HHhcCCCcccCcEEEEecchhccc---CceEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHh
Confidence            4444432 3333332   244  499999972   225699999999988764443333  2355666667788876642


Q ss_pred             c-------cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----
Q 021893          180 E-------KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----  248 (306)
Q Consensus       180 ~-------~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----  248 (306)
                      +       +..++++++++++++.|++++..     ......+.+.++.+..   .....++++.|+++||.+.+.    
T Consensus       361 ~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~-----v~~~~~sp~~~l~l~~---~~~~~~~~~~Ll~~GI~v~~~~fp~  432 (489)
T PLN02483        361 EDGTNRGAQKLAQIRENSNFFRSELQKMGFE-----VLGDNDSPVMPIMLYN---PAKIPAFSRECLKQNVAVVVVGFPA  432 (489)
T ss_pred             CccccchHHHHHHHHHHHHHHHHHHHHCCCc-----ccCCCCCCEEEEEECC---HHHHHHHHHHHHHCCcEEeeeCCCC
Confidence            1       24567888888888888886311     1112233455665543   345668999999999998842    


Q ss_pred             ---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          249 ---HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       249 ---~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                         ..+.+|++++..+++++|++++++|+++++ .+.
T Consensus       433 ~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~-~~~  468 (489)
T PLN02483        433 TPLLLARARICISASHSREDLIKALEVISEVGD-LVG  468 (489)
T ss_pred             CCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHH-HhC
Confidence               236899999999999999999999999988 653

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=99.89  E-value=1.6e-21  Score=177.94  Aligned_cols=225  Identities=22%  Similarity=0.295  Sum_probs=160.1

Q ss_pred             ccccCCCHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cc-cccccccc
Q 021893           40 LKVDFGDITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GL-ARSGRMLA  114 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~-~~~g~~~~  114 (306)
                      ..++++|++++++.++++   +.++++|+++++++++|...+    +++|.++|++||++||+||+|+ |+ +..|.. .
T Consensus       151 ~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~----~~~l~~la~~~~~~li~De~~~~g~~~~~~~~-~  225 (397)
T PRK06939        151 YRYANNDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP----LPEICDLADKYDALVMVDDSHAVGFVGENGRG-T  225 (397)
T ss_pred             EEeCCCCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC----HHHHHHHHHHhCCEEEEECcccccCcCCCCCC-H
Confidence            445667999999999752   236888998889999997766    9999999999999999999996 43 222321 1


Q ss_pred             cccCCC--CCcEE--EecccccCCcccceeeEeCHHHHhhcCCCCccC--CCCCCHHHHHHHHHHHHHHhh-ccHHHHHH
Q 021893          115 SDWEEV--RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS--TFGGNPLASAVAIASLDVIRD-EKLAERSA  187 (306)
Q Consensus       115 ~~~~~~--~~d~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~aa~~al~~~~~-~~~~~~~~  187 (306)
                      ....++  .+|+.  |+||+++ |+ ++||+++++++++.+.......  ..+.++..++++.++++.+.. ++..++++
T Consensus       226 ~~~~~~~~~~~i~~~S~sK~~~-g~-r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~  303 (397)
T PRK06939        226 VEHFGVMDRVDIITGTLGKALG-GA-SGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLW  303 (397)
T ss_pred             HHHcCCCCCCcEEEEECHHHhC-cc-CceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence            222232  34554  9999995 56 8899999999988876432211  122344456666777777654 35678888


Q ss_pred             HHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------CCCEEEEeCCCC
Q 021893          188 HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLS  260 (306)
Q Consensus       188 ~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~~lRi~~~~~  260 (306)
                      ++++.+++.|++....      ...+.+.++++.++.   ..+..++++.|.++||.+.+.       +.+++|++++..
T Consensus       304 ~~~~~l~~~L~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~  374 (397)
T PRK06939        304 ENARYFREGMTAAGFT------LGPGEHPIIPVMLGD---AKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAA  374 (397)
T ss_pred             HHHHHHHHHHHHcCCC------cCCCCCCEEEEEECC---HHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCC
Confidence            8888888888876311      112334444444432   345778999999999988642       246899998888


Q ss_pred             CCHHHHHHHHHHHHHHHhhhc
Q 021893          261 ISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       261 ~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ++++++++++++|+++++ ++
T Consensus       375 ~~~~~i~~~l~~L~~~~~-~~  394 (397)
T PRK06939        375 HTKEQLDRAIDAFEKVGK-EL  394 (397)
T ss_pred             CCHHHHHHHHHHHHHHHH-Hh
Confidence            999999999999999988 54

>PRK07683 aminotransferase A; Validated

Probab=99.89  E-value=1.3e-21  Score=177.94  Aligned_cols=261  Identities=18%  Similarity=0.217  Sum_probs=171.7

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCC------CHHHHHHHHHhcCCcEEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFG------DITALEKIFKESGDQIAGFLF   66 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~------d~~~le~~i~~~~~~~~~v~v   66 (306)
                      .|++..|+.++-......+..+....-...|.++.           +..++.+      |++.+++.++   ++++++++
T Consensus        91 ~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~i~i  167 (387)
T PRK07683         91 EIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAIT---EKTRCVVL  167 (387)
T ss_pred             cEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcC---cCceEEEE
Confidence            68888888888666655544332221112233322           1223221      5678888876   46788888


Q ss_pred             ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-cc---CCCCCcEEEeccccc-CCcccceee
Q 021893           67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DW---EEVRPDMVILGKALG-GGVIPVSAV  141 (306)
Q Consensus        67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~---~~~~~d~~s~sK~~~-~G~~~~g~~  141 (306)
                      +.++|++|.. .+.+.+++|.++|+++|+++|+||+|.++...+...+. ..   .+....+.|+||.++ +|+ |+||+
T Consensus       168 ~~p~NPtG~~-~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGl-RiG~i  245 (387)
T PRK07683        168 PYPSNPTGVT-LSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGW-RIGFL  245 (387)
T ss_pred             eCCCCCCCcC-CCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccc-eeEEE
Confidence            8889999965 58999999999999999999999999976443322211 11   122233459999999 999 99999


Q ss_pred             EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893          142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA  219 (306)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~  219 (306)
                      ++++++++.+.........+.+.+++.++...++....  +...++++++++.+.+.|++.     +.....+..|.++|
T Consensus       246 ~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~  320 (387)
T PRK07683        246 FAPSYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-----GLDVEKPTGAFYLF  320 (387)
T ss_pred             EcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-----CCcccCCCeeEEEE
Confidence            99999988876533222334456676666666643211  223455556666666666553     12223345666777


Q ss_pred             EEEecCCChhhHHHHHHHH-HHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          220 VEFDKTALPVSAYDICLKM-KERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       220 i~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ..++..  ..+..+++..+ .++||.+.|+      +++++|++..  .+++++.+++++|.++++
T Consensus       321 ~~~~~~--~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~--~~~~~~~~al~~l~~~l~  382 (387)
T PRK07683        321 PSIGHF--TMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYA--YSIETLKEGLDRLEAFLQ  382 (387)
T ss_pred             EecccC--CCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence            766531  23456777665 5679999885      2589999954  578999999999999887

>PRK07777 aminotransferase; Validated

Probab=99.89  E-value=7.6e-22  Score=179.59  Aligned_cols=220  Identities=15%  Similarity=0.209  Sum_probs=153.3

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-ccccc----CCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDW----EEV  120 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~----~~~  120 (306)
                      |++++++.++   +++++|++++++|++|.. .+.+.+++|.++|++|++++|+||+|.++...+.. .+...    .+.
T Consensus       148 d~~~l~~~~~---~~~~~v~l~~p~NPtG~~-~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~  223 (387)
T PRK07777        148 DLDALRAAVT---PRTRALIVNSPHNPTGTV-LTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRER  223 (387)
T ss_pred             CHHHHHHhcC---cccEEEEEcCCCCCCCcc-CCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCc
Confidence            6888888886   467888888889999965 47899999999999999999999999876543321 11111    112


Q ss_pred             CCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHH
Q 021893          121 RPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHL  197 (306)
Q Consensus       121 ~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L  197 (306)
                      ...+.|+||.++ +|+ |+||+++++++++.+........+..+.+.+.++..+++....  +...+.++++++.+.+.|
T Consensus       224 ~i~~~S~SK~~g~~Gl-RiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L  302 (387)
T PRK07777        224 TVTISSAAKTFNVTGW-KIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGL  302 (387)
T ss_pred             EEEEeechhhccCcCc-eeEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            223459999998 899 9999999999888776544444555555666555555542111  224556666666666666


Q ss_pred             HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccCC---------CCEEEEeCCCCCCHHHHH
Q 021893          198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH---------DTIVRLTPPLSISSNELQ  267 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~---------~~~lRi~~~~~~t~~~i~  267 (306)
                      +...     +....+..+.++|+.++..+ ..++.++++.|+ ++||.+.|+.         .+++|++.  ..++++++
T Consensus       303 ~~~~-----~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~--~~~~~~l~  374 (387)
T PRK07777        303 AEAG-----FEVHDSAGTYFLCADPRPLG-YDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAF--CKRDDTLD  374 (387)
T ss_pred             HhCC-----CCccCCCcceEEEecccccC-CCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEe--cCCHHHHH
Confidence            6642     22223345677787765211 135688999997 5699998752         35899995  45799999


Q ss_pred             HHHHHHHHHHh
Q 021893          268 EGSKALHDVLE  278 (306)
Q Consensus       268 ~~~~~l~~~l~  278 (306)
                      +++++|++...
T Consensus       375 ~~l~~l~~~~~  385 (387)
T PRK07777        375 EAIRRLRALRG  385 (387)
T ss_pred             HHHHHHHHHhc
Confidence            99999987654

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=99.89  E-value=2.3e-21  Score=179.76  Aligned_cols=269  Identities=18%  Similarity=0.150  Sum_probs=175.6

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCc------------ccccC-------CCHHHHHHHHHhc---CCc
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH------------LKVDF-------GDITALEKIFKES---GDQ   60 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~-------~d~~~le~~i~~~---~~~   60 (306)
                      ..|++..|+-++....+..+..+....-...|.|+..            +.++.       .|++.+++++++.   +.+
T Consensus       112 ~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~  191 (468)
T PLN02450        112 NKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLK  191 (468)
T ss_pred             HHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCC
Confidence            3588889999987777777766554433334555441            22232       1568898888752   246


Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-c-ccc-----------CCCCCcEEEe
Q 021893           61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-A-SDW-----------EEVRPDMVIL  127 (306)
Q Consensus        61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~-~~~-----------~~~~~d~~s~  127 (306)
                      +++++++.++|++|.. .+.+.+++|.++|++||+++|+||+|.++.+.+..+ + .+.           .+....+.||
T Consensus       192 ~k~v~l~nP~NPTG~~-~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~  270 (468)
T PLN02450        192 VKGVLITNPSNPLGTT-TTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSL  270 (468)
T ss_pred             eeEEEEecCCCCCCcc-cCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEec
Confidence            8888888889999955 689999999999999999999999999754444222 1 111           1112224499


Q ss_pred             ccccc-CCcccceeeEeCHH-HHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-----hccHHHHHHHHHHHHHHHHHHH
Q 021893          128 GKALG-GGVIPVSAVLADKE-VMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-----DEKLAERSAHLGEELRQHLFKI  200 (306)
Q Consensus       128 sK~~~-~G~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-----~~~~~~~~~~~~~~l~~~L~~~  200 (306)
                      ||.++ +|+ |+||++++++ +++.+.....  ....+.+.+.++...++.-.     -++..+++++..+.+.+.|++.
T Consensus       271 SK~~~l~Gl-RiG~li~~~~~l~~~~~~~~~--~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~  347 (468)
T PLN02450        271 SKDLGLPGF-RVGAIYSNDEMVVSAATKMSS--FGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA  347 (468)
T ss_pred             cccCCCCCc-cEEEEEECCHHHHHHHHHHhh--cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            99998 999 9999999744 5555543221  12346677777766664311     0112344455555555555543


Q ss_pred             HhhCCCceeeEEEeeeEEEEEEecCCC---hhhHHHHHHHHHH-CCceeccC------CCCEEEEeCCCCCCHHHHHHHH
Q 021893          201 QQQFPNYVKEVRGRGLFNAVEFDKTAL---PVSAYDICLKMKE-RGILAKPT------HDTIVRLTPPLSISSNELQEGS  270 (306)
Q Consensus       201 ~~~~~~~~~~~~~~g~~~~i~~~~~~~---~~~~~~~~~~l~~-~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~  270 (306)
                           +.....+..|+++|+.++..-.   .....++++.|++ +||.+.|+      .++++|++... .+++++++++
T Consensus       348 -----gi~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~-~~~~~l~~~l  421 (468)
T PLN02450        348 -----GIKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFAN-MSEETLDLAM  421 (468)
T ss_pred             -----CCcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecC-CCHHHHHHHH
Confidence                 2323345678899998863110   1123457777765 69999986      25799999432 4789999999


Q ss_pred             HHHHHHHhhhcC
Q 021893          271 KALHDVLELDLP  282 (306)
Q Consensus       271 ~~l~~~l~~~~~  282 (306)
                      ++|+++++ +..
T Consensus       422 ~ri~~~l~-~~~  432 (468)
T PLN02450        422 KRLKSFVE-SDS  432 (468)
T ss_pred             HHHHHHHH-hcc
Confidence            99999998 554

>PRK06855 aminotransferase; Validated

Probab=99.88  E-value=1.8e-21  Score=179.31  Aligned_cols=225  Identities=16%  Similarity=0.189  Sum_probs=146.2

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-cc--CCCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DW--EEVR  121 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~--~~~~  121 (306)
                      |+++|++.++++ +++++++++.++|+||. +.+.+.+++|.++|++||++||+||+|.++.+.+..+ +. ..  ....
T Consensus       158 d~~~l~~~~~~~-~~~~~i~l~~P~NPTG~-~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~  235 (433)
T PRK06855        158 DLDDLENKVKYN-PSIAGILLINPDNPTGA-VYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPG  235 (433)
T ss_pred             CHHHHHHHHhcC-CCceEEEEECCCCCCCc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCe
Confidence            789999999753 35666766677899985 5689999999999999999999999999875544321 11 11  1122


Q ss_pred             CcEEEeccccc-CCcccceeeEeC-----H---HHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh----ccHHHHHHH
Q 021893          122 PDMVILGKALG-GGVIPVSAVLAD-----K---EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD----EKLAERSAH  188 (306)
Q Consensus       122 ~d~~s~sK~~~-~G~~~~g~~~~~-----~---~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~----~~~~~~~~~  188 (306)
                      ..+.||||.++ +|+ |+||++++     +   .+++.+..... ...+.+.+.+.++..+++.-.-    ++..+.+++
T Consensus       236 I~~~S~SK~~~~pGl-RiG~ii~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~  313 (433)
T PRK06855        236 IALKGISKELPWPGS-RCGWIEVYNADKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEK  313 (433)
T ss_pred             EEEecCccccCCCcc-eEEEEEEeCCchhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHH
Confidence            34559999997 999 99999872     2   33343332222 2334567777777766642110    112333444


Q ss_pred             HHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC---------C---------------hhhHHHHHHH-HHHCCc
Q 021893          189 LGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA---------L---------------PVSAYDICLK-MKERGI  243 (306)
Q Consensus       189 ~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~---------~---------------~~~~~~~~~~-l~~~Gi  243 (306)
                      +.+.+.+.|+..    ++.....+..|.++|+.+++..         .               ..+..+++.. +.++||
T Consensus       314 r~~~~~~~L~~~----~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV  389 (433)
T PRK06855        314 RSNIAYEKLKDV----PGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGI  389 (433)
T ss_pred             HHHHHHHHHhcC----CCeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCE
Confidence            444444444332    2223344567889999887520         0               0124566655 557799


Q ss_pred             eeccCC-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhh
Q 021893          244 LAKPTH-----DTIVRLTPPLSISSNELQEGSKALHDVLELD  280 (306)
Q Consensus       244 ~~~~~~-----~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~  280 (306)
                      .+.|+.     ...+|++... .+.+++++++++|+++++ +
T Consensus       390 ~v~PG~~F~~~~~~~Rls~~~-~~~~~i~~~~~~l~~~~~-~  429 (433)
T PRK06855        390 CVVPLSSFCTELNGFRVTLLE-RDEEKFEWIYQTLAEKIE-E  429 (433)
T ss_pred             EEecCCcCCCCCCceEEEECC-CcHHHHHHHHHHHHHHHH-H
Confidence            999861     2469999643 489999999999999987 5

>PLN02187 rooty/superroot1

Probab=99.88  E-value=2.7e-21  Score=179.04  Aligned_cols=273  Identities=17%  Similarity=0.190  Sum_probs=172.6

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v   64 (306)
                      ..|++..|+.++-...+.++..+.+..-...|.|+.           +..++.       .|+++|+++++   ++++++
T Consensus       132 ~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~---~~~~~v  208 (462)
T PLN02187        132 EDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIAD---ENTVAM  208 (462)
T ss_pred             ccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcC---CCcEEE
Confidence            357788888877766666665543333333344443           122221       26899998886   456677


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccccC-CC--CCcEEEeccccc-CCcccce
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWE-EV--RPDMVILGKALG-GGVIPVS  139 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~~-~~--~~d~~s~sK~~~-~G~~~~g  139 (306)
                      +++.++|++|.+ .+.+.+++|.++|++||+++|+||+|.++.+.+..+ +...+ ..  ...+.||||.++ +|+ |+|
T Consensus       209 ~i~nP~NPTG~v-~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGl-RiG  286 (462)
T PLN02187        209 VVINPNNPCGNV-YSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGW-KIG  286 (462)
T ss_pred             EEeCCCCCCCCc-cCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccc-eeE
Confidence            777778999954 589999999999999999999999999865444322 12111 11  123348999987 999 999


Q ss_pred             eeEeC-HH-H---HhhcCCCCccCCC--CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCce-
Q 021893          140 AVLAD-KE-V---MLCIQPGEHGSTF--GGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYV-  208 (306)
Q Consensus       140 ~~~~~-~~-~---~~~~~~~~~~~~~--~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-  208 (306)
                      |++++ ++ +   ++.+........+  ..+.+.+.++.++++....   ++..+.++++++.+.+.|++.    +... 
T Consensus       287 ~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~----~~~~~  362 (462)
T PLN02187        287 WIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDI----PCVVC  362 (462)
T ss_pred             EEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhC----CCCcC
Confidence            99983 32 2   2233322122222  3467788887777753111   223445555556666666553    2121 


Q ss_pred             eeEEEeeeEEEEEEecCC-Chh-hHHHHHH-HHHHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          209 KEVRGRGLFNAVEFDKTA-LPV-SAYDICL-KMKERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       209 ~~~~~~g~~~~i~~~~~~-~~~-~~~~~~~-~l~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ...+..|+++|+.++... .+. +..+++. .+.++||.+.|+    ..++||++  +..+++++++++++|.++++ ..
T Consensus       363 ~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis--~~~~~e~l~~al~rL~~~l~-~~  439 (462)
T PLN02187        363 PKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRIT--IGVEAHMLEDALERLKGFCT-RH  439 (462)
T ss_pred             CCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEE--eCCCHHHHHHHHHHHHHHHH-Hh
Confidence            123556788888765210 011 3445554 457889999986    36899999  45678999999999999998 76


Q ss_pred             CCCCCC
Q 021893          282 PKMRKP  287 (306)
Q Consensus       282 ~~~~~~  287 (306)
                      .+....
T Consensus       440 ~~~~~~  445 (462)
T PLN02187        440 AKKTET  445 (462)
T ss_pred             hhcccc
Confidence            655443

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.88  E-value=3.3e-21  Score=176.40  Aligned_cols=268  Identities=16%  Similarity=0.165  Sum_probs=167.9

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v   64 (306)
                      ..|++..|+.+|-.....++..+....-...|.|+.           +..++.       .|+++|+++++   ++++++
T Consensus        98 ~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~~  174 (409)
T PLN00143         98 DDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIAD---ENTIAM  174 (409)
T ss_pred             hhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcc---cCCEEE
Confidence            357888888888777766665544333333455443           122221       27899998876   345666


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccccCC---CCCcEEEeccccc-CCcccce
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWEE---VRPDMVILGKALG-GGVIPVS  139 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~~~---~~~d~~s~sK~~~-~G~~~~g  139 (306)
                      +++.++|++|.+ .+.+.+++|.++|++|++++|+||+|.++.+.+..+ +.....   ....+.||||.++ +|+ |+|
T Consensus       175 ~~~nP~NPTG~~-~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGl-RvG  252 (409)
T PLN00143        175 VIINPGNPCGSV-YSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGW-GLG  252 (409)
T ss_pred             EEECCCCCCCCc-cCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCcc-ceE
Confidence            666668899855 589999999999999999999999999875544321 111111   1223449999977 899 999


Q ss_pred             eeEeC-H-HH------HhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCce
Q 021893          140 AVLAD-K-EV------MLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYV  208 (306)
Q Consensus       140 ~~~~~-~-~~------~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  208 (306)
                      |++++ + .+      ++.+........+ .+.+.+.++.++++....   ++..+++++..+.+.+.|+++    +...
T Consensus       253 ~~v~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~~~~  327 (409)
T PLN00143        253 WLVTCDPSGLLQICEIADSIKKALNPAPF-PPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEI----PCIM  327 (409)
T ss_pred             EEEeeCchhhhhhHHHHHHHHHHHhccCC-CCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcC----CCCC
Confidence            99983 3 33      2222221122222 356777777766642111   223344444444444444432    1111


Q ss_pred             -eeEEEeeeEEEEEEecCC--ChhhHHHHHH-HHHHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhh
Q 021893          209 -KEVRGRGLFNAVEFDKTA--LPVSAYDICL-KMKERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLELD  280 (306)
Q Consensus       209 -~~~~~~g~~~~i~~~~~~--~~~~~~~~~~-~l~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~  280 (306)
                       ...+..|+++|+.++...  ...+..+++. .+.++||.+.|+    .++++|++.  ..+.+++++++++|+++++ +
T Consensus       328 ~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~--~~~~~~l~~al~rl~~~l~-~  404 (409)
T PLN00143        328 CPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITF--AVEQSSLEDGLGRLKSFCG-R  404 (409)
T ss_pred             CCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEE--cCCHHHHHHHHHHHHHHHH-H
Confidence             234557889999886310  0113556665 446889999986    368999994  4678999999999999998 6


Q ss_pred             cCC
Q 021893          281 LPK  283 (306)
Q Consensus       281 ~~~  283 (306)
                      ..+
T Consensus       405 ~~~  407 (409)
T PLN00143        405 HAK  407 (409)
T ss_pred             hcc
Confidence            543

>PRK05764 aspartate aminotransferase; Provisional

Probab=99.88  E-value=2.7e-21  Score=176.30  Aligned_cols=224  Identities=19%  Similarity=0.241  Sum_probs=154.2

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-ccc-----ccCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LAS-----DWEE  119 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~-----~~~~  119 (306)
                      |++.++++++   ++++++++++++|++|.+ .+.+.+++|.++|++||+++|+||+|.++...+.. .+.     +..+
T Consensus       153 d~~~l~~~l~---~~~~~v~~~~p~NPtG~~-~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~  228 (393)
T PRK05764        153 TVEQLEAAIT---PKTKALILNSPSNPTGAV-YSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRD  228 (393)
T ss_pred             CHHHHHHhhC---ccceEEEEECCCCCCCcc-cCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcC
Confidence            5789998886   467788888888889865 57889999999999999999999999876443321 111     1112


Q ss_pred             CCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHH
Q 021893          120 VRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQH  196 (306)
Q Consensus       120 ~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~  196 (306)
                      ....+.|+||.++ +|+ |+||+++++++++.+...........+.+.+.++...++....  ++..++++++.+.+++.
T Consensus       229 ~~i~~~s~SK~~~~~G~-RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  307 (393)
T PRK05764        229 RTITVNGFSKAYAMTGW-RLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDG  307 (393)
T ss_pred             CEEEEecCcccccCccc-eeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHH
Confidence            2233458999999 899 9999999999998876543334445677777777776652111  22344455555555555


Q ss_pred             HHHHHhhCCCceeeEEEeeeEEEEEEecCC--ChhhHHHHHHHHH-HCCceeccCC----CCEEEEeCCCCCCHHHHHHH
Q 021893          197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTA--LPVSAYDICLKMK-ERGILAKPTH----DTIVRLTPPLSISSNELQEG  269 (306)
Q Consensus       197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~~~~~~~~l~-~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~  269 (306)
                      |++.    ++.....+..|.++|+.++...  ......++.+.|+ ++||.+.++.    .+++|++  +..++++++++
T Consensus       308 L~~~----~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis--~~~~~~~~~~~  381 (393)
T PRK05764        308 LNEI----PGLECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLS--YATSLEDLEEG  381 (393)
T ss_pred             HhhC----CCCcccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEE--ecCCHHHHHHH
Confidence            5553    1222233445667787776421  0113478888876 4699998752    4899999  45689999999


Q ss_pred             HHHHHHHHhhhc
Q 021893          270 SKALHDVLELDL  281 (306)
Q Consensus       270 ~~~l~~~l~~~~  281 (306)
                      +++|.++++ +.
T Consensus       382 i~~l~~~~~-~~  392 (393)
T PRK05764        382 LERIERFLE-SL  392 (393)
T ss_pred             HHHHHHHHH-hh
Confidence            999999887 53

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=99.88  E-value=2.7e-21  Score=178.10  Aligned_cols=265  Identities=19%  Similarity=0.211  Sum_probs=170.4

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCc------------ccccC-------CCHHHHHHHHHhc---CCc
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH------------LKVDF-------GDITALEKIFKES---GDQ   60 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~-------~d~~~le~~i~~~---~~~   60 (306)
                      ..|++..|+.++....+..+..+.+..-...|+|++.            +.++.       .|++.+|+++++.   +.+
T Consensus       121 ~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~  200 (447)
T PLN02607        121 DRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIR  200 (447)
T ss_pred             HHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCC
Confidence            3578888888886666655555444333334555431            12221       3689999988752   347


Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-c---cC---C---CCCcEEEecc
Q 021893           61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-D---WE---E---VRPDMVILGK  129 (306)
Q Consensus        61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~---~~---~---~~~d~~s~sK  129 (306)
                      ++++++++++|++|. +.+++.+++|.++|++|++.+|+||+|.++.+.+..+ +. +   ..   +   ....+.++||
T Consensus       201 vk~lll~nP~NPtG~-~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK  279 (447)
T PLN02607        201 VRGVLITNPSNPLGA-TVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSK  279 (447)
T ss_pred             eeEEEEeCCCCCcCc-ccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchh
Confidence            888888888999995 5689999999999999999999999998743332222 11 0   01   1   1112349999


Q ss_pred             ccc-CCcccceeeEe-CHHHHhhcCCCCccCCC-CCCHHHHHHHHHHHHHHhhccH--------HHHHHHHHHHHHHHHH
Q 021893          130 ALG-GGVIPVSAVLA-DKEVMLCIQPGEHGSTF-GGNPLASAVAIASLDVIRDEKL--------AERSAHLGEELRQHLF  198 (306)
Q Consensus       130 ~~~-~G~~~~g~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~aa~~al~~~~~~~~--------~~~~~~~~~~l~~~L~  198 (306)
                      .|| +|+ |+||+++ +++++..++..   ..+ ..+.+.+.++...++   +.++        .+++++..+.+.+.|+
T Consensus       280 ~fg~~Gl-RvG~ivs~n~~l~~~~~~~---~~~~~~s~~~q~~~~~~L~---d~~~~~~~l~~~r~~l~~~~~~~~~~L~  352 (447)
T PLN02607        280 DLGLPGF-RVGTIYSYNDKVVTTARRM---SSFTLVSSQTQHLLASMLS---DEEFTENYIRTNRERLRKRYEMIVQGLR  352 (447)
T ss_pred             cCCCCcc-eEEEEEEcCHHHHHHHHHH---hhcCCCCHHHHHHHHHHhC---CchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999 999 9999998 67776665532   222 235555555554443   3222        2333333444444444


Q ss_pred             HHHhhCCCceeeEEEeeeEEEEEEecCC---ChhhHHHHHHHHHH-CCceeccC------CCCEEEEeCCCCCCHHHHHH
Q 021893          199 KIQQQFPNYVKEVRGRGLFNAVEFDKTA---LPVSAYDICLKMKE-RGILAKPT------HDTIVRLTPPLSISSNELQE  268 (306)
Q Consensus       199 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~---~~~~~~~~~~~l~~-~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~  268 (306)
                      +.     +........|+++|+.++..-   ......++++.+++ +||.+.|+      .++|+|++... .+++++++
T Consensus       353 ~~-----gi~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~-~~~~~l~~  426 (447)
T PLN02607        353 RA-----GIECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFAN-MSEDTLEV  426 (447)
T ss_pred             hC-----CCCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEecc-CCHHHHHH
Confidence            42     232344567999999986411   01223467777775 69999986      26899999432 47899999


Q ss_pred             HHHHHHHHHhhhcC
Q 021893          269 GSKALHDVLELDLP  282 (306)
Q Consensus       269 ~~~~l~~~l~~~~~  282 (306)
                      +++||.++++ ..+
T Consensus       427 gl~Ri~~~l~-~~~  439 (447)
T PLN02607        427 ALKRIHRFMD-RRK  439 (447)
T ss_pred             HHHHHHHHHH-HHH
Confidence            9999999998 544

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=99.88  E-value=3.2e-21  Score=176.27  Aligned_cols=263  Identities=13%  Similarity=0.156  Sum_probs=169.3

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL   65 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~   65 (306)
                      .|++..|+.+|...++..+..+....-...|.++.           +..++.       .|++.+++.++   +++++++
T Consensus        97 ~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~  173 (401)
T TIGR01264        97 DVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLID---EKTAALI  173 (401)
T ss_pred             HEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhc---cCceEEE
Confidence            47777777777666655554432222222233322           122221       36888988886   3578888


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-ccCCC--CCcEEEeccccc-CCccccee
Q 021893           66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWEEV--RPDMVILGKALG-GGVIPVSA  140 (306)
Q Consensus        66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~~~~--~~d~~s~sK~~~-~G~~~~g~  140 (306)
                      ++.++|++|.. .+.+.+++|.++|+++|+++|+||+|.+|.+.+..+ ++ ....-  ...+.||||.++ +|+ |+||
T Consensus       174 ~~~p~NPtG~~-~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl-RiG~  251 (401)
T TIGR01264       174 VNNPSNPCGSV-FSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGW-RLGW  251 (401)
T ss_pred             EcCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccc-eEEE
Confidence            88889999965 579999999999999999999999999875554321 11 11111  122349999977 899 9999


Q ss_pred             eEeCH------HHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE
Q 021893          141 VLADK------EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV  211 (306)
Q Consensus       141 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~  211 (306)
                      +++++      ++++.+..... ..+..+.+.+.++...++...+   ++..+.++++++.+.+.|+.+    +++....
T Consensus       252 iv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~----~~~~~~~  326 (401)
T TIGR01264       252 IIIHDRRGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAV----PGLRPVM  326 (401)
T ss_pred             EEecCcchhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhC----CCCcccC
Confidence            99863      34444432211 2344567777777777753111   223444555555555555543    2222244


Q ss_pred             EEeeeEEEEEEecC--CChhhHHHHHHHHH-HCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          212 RGRGLFNAVEFDKT--ALPVSAYDICLKMK-ERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       212 ~~~g~~~~i~~~~~--~~~~~~~~~~~~l~-~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +..|+++|+.++..  +......++++.|+ ++||.+.|+    .++++|++.  ..+++++++++++|.++++
T Consensus       327 p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~--~~~~~~l~~~l~rl~~~~~  398 (401)
T TIGR01264       327 PSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVL--TVPVVMMEEACSRIQEFCE  398 (401)
T ss_pred             CCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEE--cCCHHHHHHHHHHHHHHHh
Confidence            67899999987531  11124677888886 689999985    368999994  4578999999999999887

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=99.88  E-value=2.1e-21  Score=175.74  Aligned_cols=260  Identities=16%  Similarity=0.142  Sum_probs=167.9

Q ss_pred             eEEEEecCCCCcccchhcccCCcc-ccccCCCCCCC-----------cccccC------CCHHHHHHHHHhc-CCcEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNE-AIRGFGPLLPG-----------HLKVDF------GDITALEKIFKES-GDQIAGF   64 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~-~~~~~~~~~~~-----------~~~~~~------~d~~~le~~i~~~-~~~~~~v   64 (306)
                      .|++..|+.++-...+.+...+.. ..-...|.|+.           ++.++.      .|+++|++++++. .++++++
T Consensus        93 ~I~it~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i  172 (374)
T PRK02610         93 NISVGNGSDELIRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVV  172 (374)
T ss_pred             HEEEcCChHHHHHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEE
Confidence            478888888876544443332221 22333344433           122221      2689999988742 1368888


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccceeeEe
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLA  143 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~g~~~~  143 (306)
                      ++++++|+||.. .+++.+++|.++|  +++++|+||+|.+|.............-...+.||||.++ +|+ |+||+++
T Consensus       173 ~l~~P~NPTG~~-~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~Gl-RiG~~v~  248 (374)
T PRK02610        173 FVVHPNSPTGNP-LTAAELEWLRSLP--EDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAH-RVGYAIG  248 (374)
T ss_pred             EEeCCCCCCCCC-CCHHHHHHHHhcc--CCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCccc-ceeeeec
Confidence            888889999965 5788899999887  4999999999997732211111111111123459999997 999 9999999


Q ss_pred             CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893          144 DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD  223 (306)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~  223 (306)
                      ++++++.+....  ..+..+.+.+.++..+++..  +.+.+.+++..+. ++.+.+.....+++. ..+..|.++|+.++
T Consensus       249 ~~~l~~~l~~~~--~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~-r~~l~~~L~~~~~~~-~~p~~g~f~~~~l~  322 (374)
T PRK02610        249 HPELIAVLEKVR--LPYNLPSFSQLAAQLALEHR--QELLAAIPEILQE-RDRLYQALQELPQLR-VWPSAANFLYLRLS  322 (374)
T ss_pred             CHHHHHHHHHhc--CCCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHH-HHHHHHHHHhCCCcE-eCCCcceEEEEeCC
Confidence            999988876543  23556777777777666532  2233333333332 222322222232222 34567888898886


Q ss_pred             cCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          224 KTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       224 ~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .   ..+..++++.|.++||.+.+. .+++|++.  . +.+++++++++|+++++ .+
T Consensus       323 ~---~~~~~~~~~~l~~~gi~v~~~-~~~lRls~--~-~~~~~~~~l~~l~~~l~-~~  372 (374)
T PRK02610        323 Q---DAALAALHQALKAQGTLVRHT-GGGLRITI--G-TPEENQRTLERLQAALT-QL  372 (374)
T ss_pred             C---CCCHHHHHHHHHHCCEEEEeC-CCeEEEeC--C-CHHHHHHHHHHHHHHHh-hc
Confidence            4   346778999999999999875 67999994  3 45778999999999887 54

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=99.88  E-value=7.8e-21  Score=172.82  Aligned_cols=222  Identities=18%  Similarity=0.234  Sum_probs=159.3

Q ss_pred             ccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc--ccccccccccccC
Q 021893           42 VDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG--LARSGRMLASDWE  118 (306)
Q Consensus        42 ~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g--~~~~g~~~~~~~~  118 (306)
                      +++.|++++++.++++. +++++|+++++++++|.+.+    +++|.++|++||+++|+||+|+.  +++.|... ...+
T Consensus       144 ~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~-~~~~  218 (385)
T TIGR01825       144 YKHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAP----LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGT-VHHF  218 (385)
T ss_pred             eCCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccC----HHHHHHHHHHhCCEEEEECcccccCcCCCCCcc-Hhhc
Confidence            45678999999888643 36899999999999998888    99999999999999999999973  33333211 1222


Q ss_pred             ----CCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCc--cCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHH
Q 021893          119 ----EVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEH--GSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGE  191 (306)
Q Consensus       119 ----~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~  191 (306)
                          +....+.|+||+++  . +.||+++++++++.+.....  ..+...++..+.++.++++.+.+ .+..+++.++++
T Consensus       219 ~~~~~~~i~~~s~sK~~~--~-~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~  295 (385)
T TIGR01825       219 GLEDKVDIQVGTLSKAIG--V-VGGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTR  295 (385)
T ss_pred             CCCcCCcEEEEeccHHhh--c-CCCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence                23333569999996  2 33668889998887754322  11223466777788888887644 346778888889


Q ss_pred             HHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc-------CCCCEEEEeCCCCCCHH
Q 021893          192 ELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP-------THDTIVRLTPPLSISSN  264 (306)
Q Consensus       192 ~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~-------~~~~~lRi~~~~~~t~~  264 (306)
                      ++++.|++++...      ....+.++++.++.   ..+..++++.|+++||.+.+       .+..++|++|++.++++
T Consensus       296 ~l~~~L~~~g~~~------~~~~~~~~~~~~~~---~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e  366 (385)
T TIGR01825       296 FFKAGLGKLGYDT------GGSETPITPVVIGD---EKAAQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPTAEHTKD  366 (385)
T ss_pred             HHHHHHHHcCCCC------CCCCCCEEEEEECC---HHHHHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEcCCCCHH
Confidence            9999888763221      11223345554432   23567899999999998853       23478999999999999


Q ss_pred             HHHHHHHHHHHHHhhhc
Q 021893          265 ELQEGSKALHDVLELDL  281 (306)
Q Consensus       265 ~i~~~~~~l~~~l~~~~  281 (306)
                      ++++++++|+++++ ++
T Consensus       367 ~i~~~~~~l~~~~~-~~  382 (385)
T TIGR01825       367 DLDQALDAYEKVGK-EL  382 (385)
T ss_pred             HHHHHHHHHHHHHH-Hh
Confidence            99999999999987 53

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]

Probab=99.88  E-value=4e-21  Score=165.19  Aligned_cols=224  Identities=20%  Similarity=0.323  Sum_probs=181.0

Q ss_pred             cccccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c-cccccccccc
Q 021893           39 HLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLAS  115 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~  115 (306)
                      -.+|+|||++.||++|+..+ ..++.|-.|.++++.|.++|    |++|++++++||.+-++||+|. | +|..|.+. -
T Consensus       281 K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcp----leelcDvah~yGAiTFlDEVHAVGlYG~rGaGv-g  355 (570)
T KOG1360|consen  281 KHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCP----LEELCDVAHKYGAITFLDEVHAVGLYGPRGAGV-G  355 (570)
T ss_pred             ceeeccCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCC----HHHHHHHHHHhCceeeeehhhhhccccCCCCCc-c
Confidence            37889999999999999864 34799999999999999999    9999999999999999999998 6 45566665 3


Q ss_pred             ccCCC--CCcEE--Eeccccc--CCcccceeeEeCHHHHhhcCCCCccCCC--CCCHHHHHHHHHHHHHHhhc---cHHH
Q 021893          116 DWEEV--RPDMV--ILGKALG--GGVIPVSAVLADKEVMLCIQPGEHGSTF--GGNPLASAVAIASLDVIRDE---KLAE  184 (306)
Q Consensus       116 ~~~~~--~~d~~--s~sK~~~--~G~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~aa~~al~~~~~~---~~~~  184 (306)
                      +..|+  +.|++  +++|+||  |||     +..+..+++-++....+..|  +.++..++.|+++.+.+..+   .++.
T Consensus       356 erdGvm~kvDiIsGTLgKafGcVGGY-----IAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~  430 (570)
T KOG1360|consen  356 ERDGVMHKVDIISGTLGKAFGCVGGY-----IAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRR  430 (570)
T ss_pred             ccCCcchhhhhcccchhhhcccccce-----ehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHH
Confidence            55554  45666  7899999  777     99999999888876544434  45778888899999999864   2567


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-Cceecc-------CCCCEEEEe
Q 021893          185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKP-------THDTIVRLT  256 (306)
Q Consensus       185 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~-------~~~~~lRi~  256 (306)
                      ..+++.+++++.|.+++..      ..+....++++.+.+   ...+.+.++.|+++ ||++..       .++..+|+.
T Consensus       431 ~hqrnv~~~kq~l~~~GiP------Vi~~pSHIiPv~vgd---a~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRia  501 (570)
T KOG1360|consen  431 QHQRNVKYVKQLLMELGIP------VIPNPSHIIPVRVGD---AALAKQASDILISKHNIYVQAINYPTVARGTERLRIA  501 (570)
T ss_pred             HHHHHHHHHHHHHHHcCCc------ccCCCcceeeeeccC---HHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecC
Confidence            7788899999999887522      445666777777664   45567788888755 999873       478899999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          257 PPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       257 ~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      |.-.+|.+.++.+++.+...++ ++.
T Consensus       502 PTP~HT~~mm~~lv~~l~~vw~-~v~  526 (570)
T KOG1360|consen  502 PTPHHTPQMMNILVNALLDVWN-EVG  526 (570)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHH-HcC
Confidence            9999999999999999999998 653

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=99.88  E-value=2.7e-21  Score=174.78  Aligned_cols=218  Identities=21%  Similarity=0.242  Sum_probs=149.8

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc--
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD--  123 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d--  123 (306)
                      |++.+++.+..  +++++++++.++|++|.+ .+.+.++++.+.|+ ++++||+||+|..+.+.+.......  ..++  
T Consensus       143 ~~~~l~~~~~~--~~~~~i~l~~P~NPtG~~-~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~~~~~~~~--~~~~~i  216 (369)
T PRK08153        143 DLDALLDAARR--ENAPLVYLANPDNPMGSW-HPAADIVAFIEALP-ETTLLVLDEAYCETAPAGAAPPIDT--DDPNVI  216 (369)
T ss_pred             CHHHHHHHhcc--cCCcEEEEeCCCCCCCCC-CCHHHHHHHHHhCC-CCcEEEEeCchhhhcCcccchhhhh--cCCCEE
Confidence            46666555543  467788887788889865 47888888888876 4999999999998765553222221  1223  


Q ss_pred             -EEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Q 021893          124 -MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQ  201 (306)
Q Consensus       124 -~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~  201 (306)
                       +.||||.++ +|+ |+||+++++++++.+....  ..++.+++++.++.++++   ++++.++.++..+..++.+.+..
T Consensus       217 ~~~SfSK~~g~~Gl-RiG~~v~~~~~~~~l~~~~--~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~~~~~L  290 (369)
T PRK08153        217 RMRTFSKAYGLAGA-RVGYAIGAPGTIKAFDKVR--NHFGMNRIAQAAALAALK---DQAYLAEVVGKIAAARDRIAAIA  290 (369)
T ss_pred             EEecchHhccCcch-heeeeecCHHHHHHHHHhh--cCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHH
Confidence             449999998 999 9999999999988776533  246678888888888875   22333444443444444443333


Q ss_pred             hhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec-cC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          202 QQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK-PT---HDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       202 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~-~~---~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      ... +.. ..+..+.++++.++..  ...+.++.+.|+++||.++ |+   ..+++|++..   ++++++.+++.|++++
T Consensus       291 ~~~-g~~-~~p~~~~f~~~~~~~~--~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~---~~~~~~~~~~al~~~~  363 (369)
T PRK08153        291 RAN-GLT-PLPSATNFVAIDCGRD--GAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG---PDEELDLFAEALPEAL  363 (369)
T ss_pred             HHC-CCc-cCCCcCcEEEEECCCC--cccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHHH
Confidence            332 121 2356677777766421  2457789999999999996 43   3479999943   7899999999999998


Q ss_pred             hhhcCC
Q 021893          278 ELDLPK  283 (306)
Q Consensus       278 ~~~~~~  283 (306)
                      . ..++
T Consensus       364 ~-~~~~  368 (369)
T PRK08153        364 E-AARK  368 (369)
T ss_pred             H-Hhhc
Confidence            7 6543

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=99.88  E-value=6.5e-21  Score=177.51  Aligned_cols=266  Identities=15%  Similarity=0.182  Sum_probs=174.0

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC------------cccccC-------CCHHHHHHHHHh---cCCc
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG------------HLKVDF-------GDITALEKIFKE---SGDQ   60 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~-------~d~~~le~~i~~---~~~~   60 (306)
                      ..|++..|+.++....+..+..+.+..-...|.|++            ++.++.       .|++.+++.+++   .+.+
T Consensus       120 e~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~  199 (496)
T PLN02376        120 ERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKK  199 (496)
T ss_pred             hhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCC
Confidence            468888888888887777777765544444466655            123333       157888776542   2246


Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccc-c------CCCCCc----EEEec
Q 021893           61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASD-W------EEVRPD----MVILG  128 (306)
Q Consensus        61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~-~------~~~~~d----~~s~s  128 (306)
                      +++++++.++|++|.+ .+++.+++|.++|++|+++||+||+|.++.+.+..+ +.. .      .+..++    +.|||
T Consensus       200 ~k~l~l~nP~NPTG~~-~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~S  278 (496)
T PLN02376        200 VKGLILTNPSNPLGTM-LDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLS  278 (496)
T ss_pred             eeEEEEcCCCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEecc
Confidence            8888888889999964 689999999999999999999999999764444322 110 1      011222    34999


Q ss_pred             cccc-CCcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccH--------HHHHHHHHHHHHHHHH
Q 021893          129 KALG-GGVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKL--------AERSAHLGEELRQHLF  198 (306)
Q Consensus       129 K~~~-~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~--------~~~~~~~~~~l~~~L~  198 (306)
                      |.++ +|+ |+||++++ +.+.+.++....  ....+.+.+.++...++   +.++        .++++++.+.+.+.|+
T Consensus       279 K~~glpGl-RvG~li~~~~~l~~~~~~~~~--~~~vs~~~Q~a~~~~L~---d~~~~~~~l~~~r~~l~~r~~~l~~~L~  352 (496)
T PLN02376        279 KDMGLPGF-RVGIVYSFNDSVVSCARKMSS--FGLVSSQTQLMLASMLS---DDQFVDNFLMESSRRLGIRHKVFTTGIK  352 (496)
T ss_pred             ccCCCCcc-eEEEEEECCHHHHHHHHHHhh--cCCCCHHHHHHHHHHhC---ChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9998 999 99999984 556554433221  12245666666555553   2222        2333344444444444


Q ss_pred             HHHhhCCCceeeEEEeeeEEEEEEecCCC---h-hhHHHHHHHHHHC-CceeccC------CCCEEEEeCCCCCCHHHHH
Q 021893          199 KIQQQFPNYVKEVRGRGLFNAVEFDKTAL---P-VSAYDICLKMKER-GILAKPT------HDTIVRLTPPLSISSNELQ  267 (306)
Q Consensus       199 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~---~-~~~~~~~~~l~~~-Gi~~~~~------~~~~lRi~~~~~~t~~~i~  267 (306)
                      +.     +.....+..|+++|++++..-.   . ....++++.++++ ||.+.|+      .++++|++... .++++++
T Consensus       353 ~~-----gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~-~~~~~l~  426 (496)
T PLN02376        353 KA-----DIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN-MDDDTLH  426 (496)
T ss_pred             HC-----CCcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC-CCHHHHH
Confidence            32     2333345788999999864210   1 1235788888875 9999985      35899999532 4789999


Q ss_pred             HHHHHHHHHHhhhcC
Q 021893          268 EGSKALHDVLELDLP  282 (306)
Q Consensus       268 ~~~~~l~~~l~~~~~  282 (306)
                      .++++|++++. ...
T Consensus       427 ~al~rl~~~l~-~~~  440 (496)
T PLN02376        427 VALGRIQDFVS-KNK  440 (496)
T ss_pred             HHHHHHHHHHH-Hhh
Confidence            99999999997 543

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=99.88  E-value=4.7e-21  Score=172.51  Aligned_cols=218  Identities=19%  Similarity=0.270  Sum_probs=157.4

Q ss_pred             ccccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc--ccccccccccc
Q 021893           40 LKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG--LARSGRMLASD  116 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g--~~~~g~~~~~~  116 (306)
                      ..++..|++.+++.++++. .++++++++++++++|.+.+    +++|.++|+++|+++|+||+|+.  ++..+... ..
T Consensus       125 ~~~~~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~-~~  199 (360)
T TIGR00858       125 RRYRHNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAP----LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGT-LE  199 (360)
T ss_pred             EEecCCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcC----HHHHHHHHHHcCcEEEEECcccccCcCCCCCch-HH
Confidence            4456679999999998653 35789999999999998877    99999999999999999999973  22222211 22


Q ss_pred             cCCCCC-----cEEEecccccCCcccceeeEeCHHHHhhcCCCCcc--CCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHH
Q 021893          117 WEEVRP-----DMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHG--STFGGNPLASAVAIASLDVIRD-EKLAERSAH  188 (306)
Q Consensus       117 ~~~~~~-----d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~  188 (306)
                      .+++.+     .+.|+||++++   +.||+++++++++.+......  .+...++..++++.++++.... ++..+++++
T Consensus       200 ~~~~~~~~~~i~i~s~sK~~~~---~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~  276 (360)
T TIGR00858       200 HFGLKPEPVDIQVGTLSKALGS---YGAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLA  276 (360)
T ss_pred             hcCCCccCCcEEEEechhhhhc---cCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence            223322     25699999973   226788999888876533222  1223456666677788876654 346788889


Q ss_pred             HHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------CCCEEEEeCCCCC
Q 021893          189 LGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLSI  261 (306)
Q Consensus       189 ~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~~lRi~~~~~~  261 (306)
                      +.+++.+.|+++.  +   . ..+..+.++|+.++.   ..+..++.+.|.++||.+.+.       +.+++|++++..+
T Consensus       277 ~~~~l~~~L~~~~--~---~-~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~  347 (360)
T TIGR00858       277 LIARLRAGLEALG--F---T-LMPSCTPIVPVIIGD---NASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAH  347 (360)
T ss_pred             HHHHHHHHHHHcC--C---c-cCCCCCCEEEEEeCC---HHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCC
Confidence            9999999998752  1   1 123456778887753   345778999999999999642       2468999999999


Q ss_pred             CHHHHHHHHHHHH
Q 021893          262 SSNELQEGSKALH  274 (306)
Q Consensus       262 t~~~i~~~~~~l~  274 (306)
                      ++++++.++++|+
T Consensus       348 ~~~~i~~~l~~l~  360 (360)
T TIGR00858       348 TPGDIDRLAEALK  360 (360)
T ss_pred             CHHHHHHHHHhhC
Confidence            9999999999873

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=99.88  E-value=2.4e-21  Score=172.65  Aligned_cols=252  Identities=14%  Similarity=0.039  Sum_probs=159.2

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCCCHHHHHHHHHhcCCcEEEEEEccccC
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFGDITALEKIFKESGDQIAGFLFEPIQG   71 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~   71 (306)
                      ..|++..|+.++-...+. +..+.... ...|.++.           ++.+|.++.+...+.+++  .++++++++.++|
T Consensus        58 ~~I~it~Gs~~~l~~~~~-~~~~~~vv-~~~P~y~~y~~~~~~~G~~v~~vp~~~~~~~~~~l~~--~~~k~v~l~nP~N  133 (332)
T PRK06425         58 IKVLIGPGLTHFIYRLLS-YINVGNII-IVEPNFNEYKGYAFTHGIRISALPFNLINNNPEILNN--YNFDLIFIVSPDN  133 (332)
T ss_pred             ceEEECCCHHHHHHHHHH-HhCCCcEE-EeCCChHHHHHHHHHcCCeEEEEeCCcccCcHHHHhh--cCCCEEEEeCCCC
Confidence            457888888877655543 33322211 11344433           233443221111233433  3677888878899


Q ss_pred             CCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccc---cCCCCCcEEEeccccc-CCcccceeeEeCHHH
Q 021893           72 EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD---WEEVRPDMVILGKALG-GGVIPVSAVLADKEV  147 (306)
Q Consensus        72 ~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~---~~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~  147 (306)
                      +||.. .+.+.+++|.++|+++|+++|+||+|.+|...+......   ..+....+.||||.++ +|+ |+||+++++++
T Consensus       134 PTG~~-~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl-RiGy~v~~~~l  211 (332)
T PRK06425        134 PLGNL-ISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSL-RIGYIATDDYN  211 (332)
T ss_pred             CcCCc-cCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchh-hheeeecCHHH
Confidence            99965 589999999999999999999999999875433211111   1122233449999999 999 99999999999


Q ss_pred             HhhcCCCCccCCCCCCHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC
Q 021893          148 MLCIQPGEHGSTFGGNPLASAVAIASLDVI-RDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA  226 (306)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~aa~~al~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~  226 (306)
                      ++.+....  ..+..+.+++.+.. ....- ..++..+.+++.++.+.+.|++..     .....+..|.++|+.++   
T Consensus       212 i~~l~~~~--~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g-----~~~~~~~~g~f~~~~~~---  280 (332)
T PRK06425        212 MKISRKIT--EPWSVCDPAIDFIR-SIDLDYVAKHSLDIMENERSYLINNLEAMG-----FRAAGDPSANFITFMIP---  280 (332)
T ss_pred             HHHHHHcC--CCCccCHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHHHHHHHCC-----CEECCCCCceEEEEEcC---
Confidence            98877532  23333444332221 11110 012345566666666666666541     22222346778888764   


Q ss_pred             ChhhHHHHHHHHHHCCceeccCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          227 LPVSAYDICLKMKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       227 ~~~~~~~~~~~l~~~Gi~~~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                         +..++++.|+++||.+.|+.      ++++|++.   .+.++.+.++++|++++
T Consensus       281 ---~~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~---~~~~~~~~l~~al~~~~  331 (332)
T PRK06425        281 ---DAHDFYSYLLKNGILVRLLDDYECLGEQYIRIAI---RRRSFNIKLVNALRNFL  331 (332)
T ss_pred             ---CHHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEe---CCHHHHHHHHHHHHHHh
Confidence               35789999999999998752      46999983   36789999999998775

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=99.87  E-value=4.3e-21  Score=174.93  Aligned_cols=255  Identities=13%  Similarity=0.051  Sum_probs=168.9

Q ss_pred             eEEEEecCCCCcccchhcccCCccc--cccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEA--IRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAG   63 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~--~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~   63 (306)
                      .|++.+|+-++-...+..+..+...  .-...|.++.           ++.++.       .|++++++.+.   +++++
T Consensus        92 ~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~  168 (393)
T TIGR03538        92 HVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVW---RRCQL  168 (393)
T ss_pred             eEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHh---hcceE
Confidence            5888899999877766665544321  2222344433           123332       26788888876   36788


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc--ccc----cccCC-----CCCcEEEeccccc
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR--MLA----SDWEE-----VRPDMVILGKALG  132 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~--~~~----~~~~~-----~~~d~~s~sK~~~  132 (306)
                      ++++.++|++|.. .+.+.+++|.++|++|+++||+||+|..+.+.+.  ..+    ....+     ....+.||||.++
T Consensus       169 i~l~~p~NPtG~~-~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~  247 (393)
T TIGR03538       169 LFVCSPGNPTGAV-LSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSN  247 (393)
T ss_pred             EEEeCCCCCcCcc-cCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcC
Confidence            8888889999965 5899999999999999999999999997644321  111    11111     1123449999876


Q ss_pred             -CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceee
Q 021893          133 -GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKE  210 (306)
Q Consensus       133 -~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~  210 (306)
                       +|+ |+||+++++++++.+.......+++.+.+.+.++.+++..-. -.+..+.++++.+.+.+.|+..   +   ...
T Consensus       248 ~~Gl-RvG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~---~---~~~  320 (393)
T TIGR03538       248 LPGL-RSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV---L---DLE  320 (393)
T ss_pred             Cccc-ceEEEecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh---C---ccc
Confidence             899 999999999998877654333344556677777665553110 0123344455555555555543   1   113


Q ss_pred             EEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccCC------------CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          211 VRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------------DTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       211 ~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~------------~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      .+..|.++|+.++.     +..++++.|+ ++||.+.|+.            .+++|++.  ..+++++++++++|++.
T Consensus       321 ~p~gg~f~~~~~~~-----~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~  392 (393)
T TIGR03538       321 LPDAGFYLWPKVPG-----DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIAL--VAPLEECVEAAERIRSF  392 (393)
T ss_pred             CCCeeEEEEEECCC-----CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEe--cCCHHHHHHHHHHHHHh
Confidence            46678899998761     3467888886 5799997642            46899994  45789999999999764

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=99.87  E-value=7.8e-21  Score=174.21  Aligned_cols=267  Identities=16%  Similarity=0.186  Sum_probs=173.4

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v   64 (306)
                      ..|++.+|+.++-...+..+..+.+..-...|.++.           +..++.       .|+++|++.++   ++++++
T Consensus       105 ~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~i  181 (412)
T PTZ00433        105 DNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVD---DRTKAL  181 (412)
T ss_pred             hhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhc---cCceEE
Confidence            357888888888776666655433322222344433           122322       25788888876   467888


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-ccCC--CCCcEEEeccccc-CCcccce
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWEE--VRPDMVILGKALG-GGVIPVS  139 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~~~--~~~d~~s~sK~~~-~G~~~~g  139 (306)
                      ++++++|++|.. .+.+.+++|.++|++||+++|+||+|.++.+.+..+ +. ....  ....+.||||.++ +|+ |+|
T Consensus       182 ~~~~p~NPtG~~-~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGl-RlG  259 (412)
T PTZ00433        182 IMTNPSNPCGSN-FSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGW-RLG  259 (412)
T ss_pred             EEeCCCCCCCcc-cCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCe-eEE
Confidence            888889999954 579999999999999999999999999875444321 11 1111  1122349999996 999 999


Q ss_pred             eeEe------CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCCceee
Q 021893          140 AVLA------DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR---DEKLAERSAHLGEELRQHLFKIQQQFPNYVKE  210 (306)
Q Consensus       140 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~  210 (306)
                      |+++      .+++++.+..... ..+..+.+.+.++..+++...   .++..++++++.+.+.+.|+..    .+....
T Consensus       260 ~~i~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~  334 (412)
T PTZ00433        260 WLLLVDPHGNGGDFLDGMKRLGM-LVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGEC----IGLSPT  334 (412)
T ss_pred             EEEEeCCcccHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcC----CCCccc
Confidence            9986      2456666554222 234567787777777665310   1223444555555555555432    112223


Q ss_pred             EEEeeeEEEEEEecCCC--hhhHHHHHHHHHH-CCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          211 VRGRGLFNAVEFDKTAL--PVSAYDICLKMKE-RGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       211 ~~~~g~~~~i~~~~~~~--~~~~~~~~~~l~~-~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      .+..|+++|+.++....  ..+..++++.|++ +||.+.|+    ..+++|++.  ...++++++++++|.++++ ...
T Consensus       335 ~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~--~~~~e~l~~al~~l~~~~~-~~~  410 (412)
T PTZ00433        335 MPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTI--SRPVEVLREAVERIKAFCE-RHK  410 (412)
T ss_pred             CCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEe--cCCHHHHHHHHHHHHHHHH-Hhc
Confidence            45568888988763100  1146789999985 79999986    267999995  4568899999999999988 544

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.87  E-value=1.6e-20  Score=169.71  Aligned_cols=242  Identities=19%  Similarity=0.205  Sum_probs=165.2

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcC---CcEEEEEEccccCCCCcccCCh
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG---DQIAGFLFEPIQGEAGVIIPPD   80 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~---~~~~~v~v~~~~~~~G~~~~~~   80 (306)
                      ++|+.+..+|+.....+.....            ....++++|+++|+++++...   +++.+|+++++++++|.+.|  
T Consensus        96 d~ii~d~~~H~sv~~~~~~~~~------------~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p--  161 (370)
T PRK05937         96 DYVLWDEQVHISVVYSLSVISG------------WHQSFRHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAP--  161 (370)
T ss_pred             CEEEEEhhhhHHHHHHHHHcCC------------ceEEecCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccC--
Confidence            5677777777766555443210            013457899999999998532   34678889999999999999  


Q ss_pred             hHHHHHHHHHHHcCCEEEEehhhh-c-ccccccccccccCC---CCCcEEEecccccC-CcccceeeEeCHHHHhhcC--
Q 021893           81 GYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEE---VRPDMVILGKALGG-GVIPVSAVLADKEVMLCIQ--  152 (306)
Q Consensus        81 ~~l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~~~~~---~~~d~~s~sK~~~~-G~~~~g~~~~~~~~~~~~~--  152 (306)
                        +++|.++|+++|+++++||+|+ | ++..|..+ ...++   ..+++.|+||.+|+ |.   + ++..+++.+.+.  
T Consensus       162 --l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~-~~~~~~~~~~~~~~tlsK~~g~~G~---~-vl~~~~~~~~~~~~  234 (370)
T PRK05937        162 --LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGF-CHSLGYENFYAVLVTYSKALGSMGA---A-LLSSSEVKQDLMLN  234 (370)
T ss_pred             --HHHHHHHHHHcCCEEEEECCccccccCCCCCch-HHhhCCCCCcEEEEechhhhhcCce---E-EEcCHHHHHHHHHh
Confidence              9999999999999999999998 5 55555443 22222   23577899999983 32   2 445555544432  


Q ss_pred             CCCccCCCCCCHHHHHHHHHHHHHHhhcc--HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhh
Q 021893          153 PGEHGSTFGGNPLASAVAIASLDVIRDEK--LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVS  230 (306)
Q Consensus       153 ~~~~~~~~~~~~~~~~aa~~al~~~~~~~--~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~  230 (306)
                      ..........++.+++++.++++.+.+..  ..++++++.+++++.|....            .+...++.++.    ..
T Consensus       235 ~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~~------------~~~~~~i~~~~----~~  298 (370)
T PRK05937        235 SPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSAA------------PGCVQPIFLPG----IS  298 (370)
T ss_pred             CCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCCC------------CCCEEEEEeCC----hh
Confidence            11222233457777777778888886532  34556666666655543210            11122344442    34


Q ss_pred             HHHHHHHHHHCCceeccC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          231 AYDICLKMKERGILAKPT---HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       231 ~~~~~~~l~~~Gi~~~~~---~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      ..++.+.|.++||.+...   ..+++|++++..+|++|++.+++.|+++++ ++.+
T Consensus       299 ~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~-~~~~  353 (370)
T PRK05937        299 EQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLE-KYQK  353 (370)
T ss_pred             HHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH-HhCC
Confidence            568899999999988732   256899999999999999999999999998 7755

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=99.87  E-value=1.7e-21  Score=175.71  Aligned_cols=257  Identities=13%  Similarity=0.116  Sum_probs=172.3

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC----CCHHHHHHHHHhcCCcEEEEEEc
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF----GDITALEKIFKESGDQIAGFLFE   67 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~----~d~~~le~~i~~~~~~~~~v~v~   67 (306)
                      ..|++..|+.++-...+..+..+....-...|.++.           +..+|.    .|++.+++.++   +++++++++
T Consensus        82 ~~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~d~~~l~~~~~---~~~~~v~i~  158 (366)
T PRK01533         82 EQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALNNGVYDLDEISSVVD---NDTKIVWIC  158 (366)
T ss_pred             ceEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecCCCCcCHHHHHHHhC---cCCcEEEEe
Confidence            467788888877666655554433322222333322           223333    37899998886   467788888


Q ss_pred             cccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccc---cCCCCCcEEEeccccc-CCcccceeeE
Q 021893           68 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASD---WEEVRPDMVILGKALG-GGVIPVSAVL  142 (306)
Q Consensus        68 ~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~---~~~~~~d~~s~sK~~~-~G~~~~g~~~  142 (306)
                      .++|++|.+. +.+.+++|.++|++++ ++|+||+|.+|...+... ...   ..+....+-||||.++ +|+ |+||++
T Consensus       159 ~P~NPTG~~~-~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~Gl-RiG~~i  235 (366)
T PRK01533        159 NPNNPTGTYV-NDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASF-RVGYAV  235 (366)
T ss_pred             CCCCCCCCCc-CHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHH-HHhHHh
Confidence            8899999665 7888999999998877 567799998764332111 111   1112223449999999 999 999999


Q ss_pred             eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE
Q 021893          143 ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF  222 (306)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~  222 (306)
                      +++++++.+....  ..++.+.+++.++.++++.   .++.+++++..+..++.+....... +.. ..+..|+++|+.+
T Consensus       236 ~~~~~~~~l~~~~--~~~~~~~~~q~aa~~~l~~---~~~~~~~~~~~~~~r~~~~~~l~~~-g~~-~~~~~~nf~~~~~  308 (366)
T PRK01533        236 GHEELIEKLNVVR--LPFNVSSLAQKAATIAFGD---DEFIEEIVRVNTEGLRQYESFCKEN-EIP-FYQSQTNFIFLPV  308 (366)
T ss_pred             CCHHHHHHHHHhc--CCCCcCHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHhC-CCc-cCCCcCcEEEEeC
Confidence            9999998886533  3577888898888888852   2333333333333333444333322 121 2345678888876


Q ss_pred             ecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          223 DKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       223 ~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      +      +..++.+.|+++||.+++. ++++|++   .-+.++.+.++++|+++++ ..++
T Consensus       309 ~------~~~~~~~~l~~~GI~Vr~~-~~~iRis---~~~~~~~~~l~~al~~~~~-~~~~  358 (366)
T PRK01533        309 E------NGGEIYEACAHAGFIIRPF-PNGVRIT---VGTREQNEGVISVLQQHFE-NKKR  358 (366)
T ss_pred             C------CHHHHHHHHHHCCcEEccC-CCceEEe---CCCHHHHHHHHHHHHHHHH-hccc
Confidence            4      2457899999999999986 6889998   4478999999999999988 6554

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.87  E-value=9.7e-21  Score=174.11  Aligned_cols=268  Identities=15%  Similarity=0.146  Sum_probs=169.8

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v   64 (306)
                      ..|++..|+.+|-..+...+..+.+..-...|.|+.           +..++.       .|++.++++++   ++++++
T Consensus       118 ~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i  194 (430)
T PLN00145        118 DDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALAD---ENTVAM  194 (430)
T ss_pred             hhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhC---cCceEE
Confidence            458888888888777666665543333223344442           122221       27899998887   467777


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccccC---CCCCcEEEeccccc-CCcccce
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWE---EVRPDMVILGKALG-GGVIPVS  139 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~~---~~~~d~~s~sK~~~-~G~~~~g  139 (306)
                      ++++++|++|.+ .+.+.+++|.++|+++|+++|+||+|.++.+.+..+ +....   .....+.||||.++ +|+ |+|
T Consensus       195 ~i~~P~NPtG~v-~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~-RlG  272 (430)
T PLN00145        195 VIINPNNPCGSV-YSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGW-RLG  272 (430)
T ss_pred             EEeCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCe-eEE
Confidence            777778999964 579999999999999999999999999875444321 11111   11223449999977 999 999


Q ss_pred             eeEe--CHHHHh------hcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCce
Q 021893          140 AVLA--DKEVML------CIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYV  208 (306)
Q Consensus       140 ~~~~--~~~~~~------~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  208 (306)
                      |+++  ++.+++      .+.... ......+.+.+.++...++.-.+   ++..+.++++++.+.+.|+..    ++..
T Consensus       273 ~iv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~g~~  347 (430)
T PLN00145        273 WIATCDPNGILKETKVVDSIRNYL-NISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEI----KCIT  347 (430)
T ss_pred             EEEEecchhhhhhhHHHHHHHHHh-cccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCC
Confidence            9987  333332      222211 12223466777777776653111   123334444444444444432    2222


Q ss_pred             e-eEEEeeeEEEEEEecCC--ChhhHHHHHHHHH-HCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhh
Q 021893          209 K-EVRGRGLFNAVEFDKTA--LPVSAYDICLKMK-ERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLELD  280 (306)
Q Consensus       209 ~-~~~~~g~~~~i~~~~~~--~~~~~~~~~~~l~-~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~  280 (306)
                      . ..+..|+++|+.++...  ...+..+++..|+ ++||.+.|+    .++++|++.  ..+.+++++++++|.+++. +
T Consensus       348 ~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~--~~~~~~l~~al~rl~~~~~-~  424 (430)
T PLN00145        348 CPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITF--AIDPPSLEDGLERLKSFCL-R  424 (430)
T ss_pred             CCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEe--CCCHHHHHHHHHHHHHHHH-H
Confidence            1 24667888888776310  0124567776665 669999985    368999995  4688999999999999998 6


Q ss_pred             cCC
Q 021893          281 LPK  283 (306)
Q Consensus       281 ~~~  283 (306)
                      ..+
T Consensus       425 ~~~  427 (430)
T PLN00145        425 HAK  427 (430)
T ss_pred             hcc
Confidence            654

>PRK06107 aspartate aminotransferase; Provisional

Probab=99.87  E-value=6.3e-21  Score=174.29  Aligned_cols=266  Identities=15%  Similarity=0.104  Sum_probs=173.7

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL   65 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~   65 (306)
                      +|++.+|+.+|......+...+....-...|.++.           ...++.       .|++.+++.++   +++++++
T Consensus        95 ~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~---~~~~~v~  171 (402)
T PRK06107         95 EITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAIT---PRTRWLI  171 (402)
T ss_pred             hEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcC---cCceEEE
Confidence            47777777777666655444433222222232221           112221       25788888876   4677777


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHHc-CCEEEEehhhhcccccccccc-cc-c-CCC---CCcEEEeccccc-CCccc
Q 021893           66 FEPIQGEAGVIIPPDGYLKAVRDLCSKY-NILMIADEIQSGLARSGRMLA-SD-W-EEV---RPDMVILGKALG-GGVIP  137 (306)
Q Consensus        66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~-gi~li~De~~~g~~~~g~~~~-~~-~-~~~---~~d~~s~sK~~~-~G~~~  137 (306)
                      ++.++|++|.. .+.+.+++|+++|++| ++++|+||+|..+.+.+..+. +. . .+.   ...+.|+||.++ +|+ |
T Consensus       172 l~~p~NPtG~~-~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGl-R  249 (402)
T PRK06107        172 LNAPSNPTGAV-YSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGW-R  249 (402)
T ss_pred             EECCCCCCCcC-cCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCccc-c
Confidence            77778899954 5899999999999998 999999999987644443221 11 1 111   222448899998 999 9


Q ss_pred             ceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893          138 VSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG  215 (306)
Q Consensus       138 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g  215 (306)
                      +||+++++++++.+........++.+.+.+.++..+++.-.  .++..+.++++.+.+.+.|+..    ++.....+..|
T Consensus       250 iG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~g~~~~~p~gg  325 (402)
T PRK06107        250 IGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAI----PGLSCLVPDGA  325 (402)
T ss_pred             eeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcC----CCCcccCCCcc
Confidence            99999999999888775555566778888888877774211  0223444555555555555542    22333345678


Q ss_pred             eEEEEEEecC-----CCh---hhHHHHHHHH-HHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          216 LFNAVEFDKT-----ALP---VSAYDICLKM-KERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       216 ~~~~i~~~~~-----~~~---~~~~~~~~~l-~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .++|+.++..     +..   .+..+++..+ .++||.+.|+    ..+++|++.  ..+.+++++++++|.+.++ ++
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~--~~~~e~l~~~l~~l~~~l~-~~  401 (402)
T PRK06107        326 FYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSI--ATSLETLEEACARIERAVA-AL  401 (402)
T ss_pred             eEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEe--CCCHHHHHHHHHHHHHHHH-hc
Confidence            8888876421     001   1456777666 4679999986    257999994  4689999999999999987 54

>PLN02656 tyrosine transaminase

Probab=99.87  E-value=1.1e-20  Score=173.08  Aligned_cols=267  Identities=15%  Similarity=0.112  Sum_probs=170.9

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v   64 (306)
                      ..|++..|+.+|....+..+..+.+..-...|.++.           +..++.       .|++.+++.++   ++++++
T Consensus        97 ~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~v  173 (409)
T PLN02656         97 DDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALAD---QNTVAL  173 (409)
T ss_pred             ccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhc---cCceEE
Confidence            468888888888766655554433222222233322           122221       27889988886   356677


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc---ccCCCCCcEEEeccccc-CCcccce
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS---DWEEVRPDMVILGKALG-GGVIPVS  139 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~---~~~~~~~d~~s~sK~~~-~G~~~~g  139 (306)
                      +++.++|++|.+ .+.+.+++|.++|++||+++|+||+|.++.+.+..+ +.   +.......+.||||.++ +|+ |+|
T Consensus       174 ~l~~P~NPtG~~-~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGl-RiG  251 (409)
T PLN02656        174 VIINPGNPCGNV-YSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGW-RLG  251 (409)
T ss_pred             EEECCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcce-eEE
Confidence            777778899865 578999999999999999999999999875554321 11   11111223448999976 899 999


Q ss_pred             eeEeC--------HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCce
Q 021893          140 AVLAD--------KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYV  208 (306)
Q Consensus       140 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  208 (306)
                      |++++        +++++.+...... ..+.+.+.+.++..+++...+   ++..++++++++.+.+.|+.+    +...
T Consensus       252 ~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~----~~~~  326 (409)
T PLN02656        252 WFVTTDPSGSFRDPKIVERIKKYFDI-LGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEI----PCIT  326 (409)
T ss_pred             EEEEeCcccccccHHHHHHHHHHHhh-hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhC----CCCc
Confidence            99983        5677766543221 224567788888777753111   223444555555555555543    1111


Q ss_pred             -eeEEEeeeEEEEEEecCC-Ch-hhHHHH-HHHHHHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhh
Q 021893          209 -KEVRGRGLFNAVEFDKTA-LP-VSAYDI-CLKMKERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLELD  280 (306)
Q Consensus       209 -~~~~~~g~~~~i~~~~~~-~~-~~~~~~-~~~l~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~  280 (306)
                       ...+..|+++|+.++... .. .+..++ .+.|.++||.+.|+    .++++|++..  .+++++++++++|++++. .
T Consensus       327 ~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~--~~~e~l~eal~rl~~~~~-~  403 (409)
T PLN02656        327 CPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFA--ADPSSLEEALGRIKSFYL-R  403 (409)
T ss_pred             CCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHH-H
Confidence             123566788898876310 01 124344 56777889999986    3579999954  588999999999999988 5


Q ss_pred             cC
Q 021893          281 LP  282 (306)
Q Consensus       281 ~~  282 (306)
                      ..
T Consensus       404 ~~  405 (409)
T PLN02656        404 HS  405 (409)
T ss_pred             hc
Confidence            44

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=99.87  E-value=3e-21  Score=174.27  Aligned_cols=252  Identities=16%  Similarity=0.100  Sum_probs=164.5

Q ss_pred             ceEEEEecCCCCcccchhcc-cCCccccccCCCCCCC---------cccccCCCHHHHHHHHHhcCCcEEEEEEccccCC
Q 021893            3 AIIVSCCGCFHGRTLAAISM-SCDNEAIRGFGPLLPG---------HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGE   72 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~   72 (306)
                      ..|++.+|+.++-...+..+ ..+.+..-...|.++.         ...+.+++++++++      ++++++++++++|+
T Consensus        87 ~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~l~~------~~~~~v~~~~p~NP  160 (364)
T PRK07865         87 AAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADSLTELGP------QRPALIWLNSPSNP  160 (364)
T ss_pred             ccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCChhhCCc------ccceEEEEcCCCCC
Confidence            46888888887765544443 2332222222344433         23334445444432      46788888888999


Q ss_pred             CCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-cc------CCCCCcEEEeccccc-CCcccceeeEeC
Q 021893           73 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DW------EEVRPDMVILGKALG-GGVIPVSAVLAD  144 (306)
Q Consensus        73 ~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~------~~~~~d~~s~sK~~~-~G~~~~g~~~~~  144 (306)
                      +|.+ .+.+.+++|.++|++||+++|+||+|.++...+...+. ..      ......+.||||.++ +|+ |+||++++
T Consensus       161 tG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-RiG~i~~~  238 (364)
T PRK07865        161 TGRV-LGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGY-RAGFVAGD  238 (364)
T ss_pred             CCcc-CCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCce-eeEEEecC
Confidence            9965 47899999999999999999999999977554432211 11      011223449999996 899 99999999


Q ss_pred             HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893          145 KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD  223 (306)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~  223 (306)
                      +++++.+........++.+.+.+.++..+++... .++..+.++++.+.+.+.|++.+     .....+..|.++|+.+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~~~~~~~~~~~  313 (364)
T PRK07865        239 PALVAELLEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAAG-----FRVDHSEAGLYLWATRG  313 (364)
T ss_pred             HHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcC-----CcccCCCccEEEEEeCC
Confidence            9998887654334445567777777766664311 12234455556666666665531     22223445667777653


Q ss_pred             cCCChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893          224 KTALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALH  274 (306)
Q Consensus       224 ~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~  274 (306)
                           .+..++++.|.++||.+.|+      .++++|++..  .+++++++++++|+
T Consensus       314 -----~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~~~~~~~~l~  363 (364)
T PRK07865        314 -----EDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALT--ATDERIAAAVERLA  363 (364)
T ss_pred             -----CCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEec--CCHHHHHHHHHHhh
Confidence                 23567888999999999874      3579999954  47899999999885

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=99.87  E-value=4.4e-21  Score=180.44  Aligned_cols=265  Identities=13%  Similarity=0.122  Sum_probs=164.3

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL   65 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~   65 (306)
                      .|++.+|+-++-..++.++..+.+..-...|.|+.           ++.++.       .|++++++.++   +++++++
T Consensus       210 ~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~---~~~k~i~  286 (517)
T PRK13355        210 DIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKIT---SRTKAIV  286 (517)
T ss_pred             HEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcC---cCceEEE
Confidence            57777777777665555555443332222344433           122211       37899998886   4688888


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-ccC-CC-CCcEEEeccccc-CCccccee
Q 021893           66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWE-EV-RPDMVILGKALG-GGVIPVSA  140 (306)
Q Consensus        66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~~-~~-~~d~~s~sK~~~-~G~~~~g~  140 (306)
                      ++.++|+||.+ .+++.+++|.++|++||++||+||+|..+.+.+..+ +. ... .. ...+.||||.++ +|+ |+||
T Consensus       287 i~nP~NPTG~v-~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~-RiG~  364 (517)
T PRK13355        287 IINPNNPTGAL-YPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGY-RIGW  364 (517)
T ss_pred             EECCCCCCCcC-cCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCccc-ceEE
Confidence            88889999966 579999999999999999999999999875554321 11 111 11 111247899997 899 9999


Q ss_pred             eEeC--HH----HHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHH---HHHHHHHHHHHHHHHHHhhCCCceee
Q 021893          141 VLAD--KE----VMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAE---RSAHLGEELRQHLFKIQQQFPNYVKE  210 (306)
Q Consensus       141 ~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~---~~~~~~~~l~~~L~~~~~~~~~~~~~  210 (306)
                      ++++  ++    +++.+... ....++.+.+++.++.++++.... ++...   ++.+.++.+.+.|++    .++....
T Consensus       365 ~i~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~g~~~~  439 (517)
T PRK13355        365 MILSGNKRIAKDYIEGLNML-ANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNA----IPGISAV  439 (517)
T ss_pred             EEeeCchhhHHHHHHHHHHH-hcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhc----CCCcccC
Confidence            9853  43    33333211 123345677888888777742110 11111   222333444444443    2223334


Q ss_pred             EEEeeeEEEEEEecCCC-hhhHHHHH-HHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          211 VRGRGLFNAVEFDKTAL-PVSAYDIC-LKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       211 ~~~~g~~~~i~~~~~~~-~~~~~~~~-~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .+..++++|+.++.... ..+..+++ +.|.++||.+.|+      .+++||++  +..+.+++++++++|.++++ ..
T Consensus       440 ~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris--~~~~~~~l~~a~~rl~~~~~-~~  515 (517)
T PRK13355        440 KPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVV--YLPRLEDLEDAMDRLADFFS-YY  515 (517)
T ss_pred             CCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEE--eCCCHHHHHHHHHHHHHHHH-Hh
Confidence            45566667767653110 11234555 5566889999875      36899999  56789999999999999988 54

>PRK07550 hypothetical protein; Provisional

Probab=99.87  E-value=7.6e-21  Score=172.94  Aligned_cols=261  Identities=16%  Similarity=0.175  Sum_probs=170.0

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v   64 (306)
                      ..|++.+|+.++-...+..+..+.+..-...|.++.           ++.++.       .|++++++.+++   +++++
T Consensus        91 ~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~---~~~~v  167 (386)
T PRK07550         91 EQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITP---RTRAI  167 (386)
T ss_pred             ceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcc---cCcEE
Confidence            357777777777655554554433222222233322           122332       268889998873   56676


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccc-cccCC---CCCcEEEeccccc-CCcccc
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLA-SDWEE---VRPDMVILGKALG-GGVIPV  138 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~-~~~~~---~~~d~~s~sK~~~-~G~~~~  138 (306)
                      ++++++|++|.+ .+.+.+++|.++|++||+++|+||+|.++...+. ... ....+   ....+.|+||.++ +|+ |+
T Consensus       168 ~~~~P~NPtG~~-~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~-Ri  245 (386)
T PRK07550        168 ALVTPNNPTGVV-YPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGH-RV  245 (386)
T ss_pred             EEeCCCCCCCcc-cCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCccc-ce
Confidence            666677888865 5799999999999999999999999987633221 111 11111   1233559999999 899 99


Q ss_pred             eeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893          139 SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL  216 (306)
Q Consensus       139 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~  216 (306)
                      ||+++++++++.+.........+.+.+++.++..+++.+..  ++..++++++.+.+.+.|+..    +.+. ..+..|.
T Consensus       246 G~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~-~~~~g~~  320 (386)
T PRK07550        246 GAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARL----PGWE-LLASGAY  320 (386)
T ss_pred             EeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhC----CCce-eCCCceE
Confidence            99999999888777544444555677777777776654322  223444555555555555543    1121 2234567


Q ss_pred             EEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          217 FNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       217 ~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      ++|+.++..  ..++.++++.|+ ++||.+.|+      +.+++|+++. ..+++++++++++|.+.
T Consensus       321 ~~~~~~~~~--~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~-~~~~~~~~~~~~~l~~~  384 (386)
T PRK07550        321 FAYVRHPFP--DRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFA-NADVAGIGELVERLRAF  384 (386)
T ss_pred             EEEecCCCC--CCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEee-cCCHHHHHHHHHHHHhh
Confidence            778877631  246788999875 579999885      2579999964 34788999999999764

>PRK07568 aspartate aminotransferase; Provisional

Probab=99.87  E-value=1.1e-20  Score=172.68  Aligned_cols=221  Identities=17%  Similarity=0.259  Sum_probs=152.6

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-ccCCCCCc
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWEEVRPD  123 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~~~~~~d  123 (306)
                      +++.|++.++   +++++|+++.++|++|.+ .+.+.+++|.++|+++|+++|+||+|.++.+.+..+ +. ...+....
T Consensus       151 ~~~~l~~~~~---~~~~~v~i~~p~NPtG~~-~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~  226 (397)
T PRK07568        151 SKEEIEKLIT---PKTKAILISNPGNPTGVV-YTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDR  226 (397)
T ss_pred             CHHHHHHhcC---ccceEEEEECCCCCCCcc-CCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCC
Confidence            4688888876   467888887788899854 578889999999999999999999999875554321 11 11122222


Q ss_pred             ---EEEeccccc-CCcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHH
Q 021893          124 ---MVILGKALG-GGVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQH  196 (306)
Q Consensus       124 ---~~s~sK~~~-~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~  196 (306)
                         +.|+||.++ +|+ |+||++++ +++++.+..... ..++.+.+.+.++..+++....  +++.+.++++++.+.+.
T Consensus       227 ~i~~~S~SK~~~~~G~-R~G~~~~~~~~~~~~~~~~~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  304 (397)
T PRK07568        227 VIIIDSVSKRYSACGA-RIGCLISKNKELIAAAMKLCQ-ARLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEE  304 (397)
T ss_pred             EEEEecchhhccCCCc-ceEEEecCCHHHHHHHHHHhh-ccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence               349999999 799 99999984 677776543222 2356677777777777753211  22344555556666666


Q ss_pred             HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH------CCceeccC---------CCCEEEEeCCCCC
Q 021893          197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE------RGILAKPT---------HDTIVRLTPPLSI  261 (306)
Q Consensus       197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~------~Gi~~~~~---------~~~~lRi~~~~~~  261 (306)
                      |++.    ++.....+..|.++|+.++.    .+..++++.|++      +||.+.|+         +.+++|++.  ..
T Consensus       305 L~~~----~~~~~~~p~g~~~~~~~l~~----~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~--~~  374 (397)
T PRK07568        305 LNKI----PGVVCEKPKGAFYIIAKLPV----DDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAY--VL  374 (397)
T ss_pred             HhcC----CCceecCCCcceEEEEecCC----CCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEE--eC
Confidence            6543    22222334556777888764    246688888876      58998874         136999994  45


Q ss_pred             CHHHHHHHHHHHHHHHhhhcCC
Q 021893          262 SSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       262 t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      +.+++++++++|+++++ ++.+
T Consensus       375 ~~~~~~~~~~~l~~~l~-~~~~  395 (397)
T PRK07568        375 NEEDLKRAMEILKEALE-KYNK  395 (397)
T ss_pred             CHHHHHHHHHHHHHHHH-Hhhc
Confidence            78999999999999998 7654

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=99.87  E-value=3.7e-20  Score=169.13  Aligned_cols=211  Identities=17%  Similarity=0.205  Sum_probs=150.6

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |++.++++++   +++++|++++++|++|.+.+    +++|.++|+++|+++++|++|+.. ..  .  .+.....+|+.
T Consensus       146 ~~~~l~~~i~---~~t~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~~~-~~--~--~~~~~~~~d~~  213 (398)
T TIGR03392       146 DIRQLPELLT---PRTRILALGQMSNVTGGCPD----LARAITLAHQYGAVVVVDGAQGVV-HG--P--PDVQALDIDFY  213 (398)
T ss_pred             CHHHHHHHhc---cCceEEEEECccccccccCC----HHHHHHHHHHcCCEEEEEhhhhcC-CC--C--CChhhcCCCEE
Confidence            7899999887   57899999999999999988    999999999999999999999721 11  1  22223456777


Q ss_pred             Eec--ccccCCcccceeeEeCHHHHhhcCCCCccC---------------------CCCCCHHHHHHHHHHHHHHhhcc-
Q 021893          126 ILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGS---------------------TFGGNPLASAVAIASLDVIRDEK-  181 (306)
Q Consensus       126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~aa~~al~~~~~~~-  181 (306)
                      ++|  |.++ .. ++|++++++++++.+.+.....                     ..+.+..+..++.++++.+.+.+ 
T Consensus       214 ~~s~~K~~g-p~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~  291 (398)
T TIGR03392       214 AFSGHKLYG-PT-GIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDI  291 (398)
T ss_pred             EEecccccC-CC-ceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCH
Confidence            766  9665 33 6899999999887775432110                     11445567777888888775533 


Q ss_pred             --HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----------
Q 021893          182 --LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----------  249 (306)
Q Consensus       182 --~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----------  249 (306)
                        ..++..++.+++++.|+++    ++........+.++.+.++.    ....++.+.|.++||.++++.          
T Consensus       292 ~~i~~~~~~l~~~l~~~l~~l----~g~~~~~~~~~~i~~~~~~~----~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~  363 (398)
T TIGR03392       292 AAAEAWSVSLADLAEERLAQL----PGFRSFRCPGSSLLAFDFAG----VHHSDLAALLAESGIALRAGQHCAQPLMAAL  363 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHhcC----CCeEEeCCCCCcEEEEEeCC----cCHHHHHHHHHhCCEEEecCccchHHHHHHh
Confidence              4455555566665555543    22221111234455655542    456789999999999998642          


Q ss_pred             --CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          250 --DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       250 --~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                        ++++|++++.++|++|++.+++.|+++++
T Consensus       364 g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~  394 (398)
T TIGR03392       364 GVSGTLRASFAPYNTQQDVDALVDAVGAALE  394 (398)
T ss_pred             CCCCEEEEEeeccCCHHHHHHHHHHHHHHHH
Confidence              47899999999999999999999999887

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>PRK07337 aminotransferase; Validated

Probab=99.87  E-value=9.5e-21  Score=172.43  Aligned_cols=218  Identities=14%  Similarity=0.167  Sum_probs=151.8

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE-
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM-  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~-  124 (306)
                      |++++++.++   +++++++++.++|++|.+ .+.+.+++|.++|+++++++|+||+|.++...+...+.  .....++ 
T Consensus       152 ~~~~l~~~~~---~~~~~v~l~~p~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~--~~~~~~vi  225 (388)
T PRK07337        152 TAADVEAAWG---ERTRGVLLASPSNPTGTS-IAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSA--LSLGDDVI  225 (388)
T ss_pred             CHHHHHhhcC---ccceEEEEECCCCCCCcC-cCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcCh--hhccCCEE
Confidence            6788888886   467888888888999954 57999999999999999999999999977554432211  1222333 


Q ss_pred             --EEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHH
Q 021893          125 --VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR---DEKLAERSAHLGEELRQHLF  198 (306)
Q Consensus       125 --~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~---~~~~~~~~~~~~~~l~~~L~  198 (306)
                        .|+||.++ +|+ |+||+++++++++.+.........+.+.+.+.++..+++.-.   -.+..+.++++++.+.+.|+
T Consensus       226 ~~~S~SK~~~~~G~-RiG~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~  304 (388)
T PRK07337        226 TINSFSKYFNMTGW-RLGWLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALE  304 (388)
T ss_pred             EEEechhhcCCchh-heeeeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHH
Confidence              38999997 899 999999999988887654333344567777777766664210   01234445555555555555


Q ss_pred             HHHhhCCCcee-eEEEeeeEEEEEEecCC--ChhhHHHHHHHHH-HCCceeccC-------CCCEEEEeCCCCCCHHHHH
Q 021893          199 KIQQQFPNYVK-EVRGRGLFNAVEFDKTA--LPVSAYDICLKMK-ERGILAKPT-------HDTIVRLTPPLSISSNELQ  267 (306)
Q Consensus       199 ~~~~~~~~~~~-~~~~~g~~~~i~~~~~~--~~~~~~~~~~~l~-~~Gi~~~~~-------~~~~lRi~~~~~~t~~~i~  267 (306)
                      +..     ... ..+..|+++|+.++...  ...++.+++..++ ++||.+.|+       ..+++|++..  .+.++++
T Consensus       305 ~~~-----~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~--~~~~~l~  377 (388)
T PRK07337        305 SLG-----FKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYA--TSMSRLE  377 (388)
T ss_pred             hcC-----CccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEec--CCHHHHH
Confidence            531     221 24567899999886410  0135678887755 679999874       2579999954  4788999


Q ss_pred             HHHHHHHHHH
Q 021893          268 EGSKALHDVL  277 (306)
Q Consensus       268 ~~~~~l~~~l  277 (306)
                      +++++|.+++
T Consensus       378 ~~l~rl~~~l  387 (388)
T PRK07337        378 EAVARLGKLF  387 (388)
T ss_pred             HHHHHHHHHh
Confidence            9999998765

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=99.87  E-value=4e-21  Score=172.92  Aligned_cols=251  Identities=16%  Similarity=0.111  Sum_probs=165.3

Q ss_pred             ceEEEEecCCCCcccchhcc-cCCccccccCCCCCCC---------cccccCCCHHHHHHHHHhcCCcEEEEEEccccCC
Q 021893            3 AIIVSCCGCFHGRTLAAISM-SCDNEAIRGFGPLLPG---------HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGE   72 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~   72 (306)
                      ..|++..|+.+|-...+..+ ..+.+..-...|.+++         ...+..+|++.++    .  ++++++++++++|+
T Consensus        81 ~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~l~----~--~~~~~v~~~~p~NP  154 (357)
T TIGR03539        81 TAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAADDPTELD----P--VGPDLIWLNSPGNP  154 (357)
T ss_pred             CeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccCChhhcC----c--cCccEEEEeCCCCC
Confidence            46888888888765544333 2322222222344433         2333344544332    1  46889999999999


Q ss_pred             CCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-ccc------CCCCCcEEEeccccc-CCcccceeeEeC
Q 021893           73 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDW------EEVRPDMVILGKALG-GGVIPVSAVLAD  144 (306)
Q Consensus        73 ~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~------~~~~~d~~s~sK~~~-~G~~~~g~~~~~  144 (306)
                      +|.. .+.+.+++|.++|++||+++|+||+|.++.+.+.... .+.      ......+.||||.++ +|+ |+||++++
T Consensus       155 tG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~-R~G~~i~~  232 (357)
T TIGR03539       155 TGRV-LSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGY-RAGFVAGD  232 (357)
T ss_pred             cCcc-CCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCce-eEEEEecC
Confidence            9965 5789999999999999999999999987654443221 110      011123349999996 899 99999999


Q ss_pred             HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893          145 KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD  223 (306)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~  223 (306)
                      +++++.+........++.+.+++.++.++++... .+.....++++++.+.+.|++.+     .....+..|.++|+.++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~g-----~~~~~p~~~~~~~~~~~  307 (357)
T TIGR03539       233 PALVAELLTVRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKAG-----FRIDHSEAGLYLWATRG  307 (357)
T ss_pred             HHHHHHHHHHHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCCcCCCccEEEEEECC
Confidence            9998887654444456677888877777774311 12234555566666666665532     22233446677777654


Q ss_pred             cCCChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHH
Q 021893          224 KTALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKAL  273 (306)
Q Consensus       224 ~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l  273 (306)
                      .     +..++.+.|.++||.+.|+      +.+++|++.  ..+++++++++++|
T Consensus       308 ~-----~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~--~~~~~~i~~~~~~l  356 (357)
T TIGR03539       308 E-----DAWDTVDRLAELGILVAPGDFYGPAGSQHVRVAL--TATDERIAAAVARL  356 (357)
T ss_pred             C-----CHHHHHHHHHhCCEEECCccccCCCCCCeEEEEe--cCCHHHHHHHHHhh
Confidence            2     4567889999999999885      257999995  45788999998876

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=99.87  E-value=2.3e-21  Score=174.91  Aligned_cols=216  Identities=24%  Similarity=0.257  Sum_probs=154.8

Q ss_pred             CCCHHHHHHHHHhcC-C--cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-c-cccC
Q 021893           44 FGDITALEKIFKESG-D--QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-A-SDWE  118 (306)
Q Consensus        44 ~~d~~~le~~i~~~~-~--~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~-~~~~  118 (306)
                      +.|++.|++.+++.+ +  ++++++++.++|++|.. .+.+.+++|.++|++|++++|+||+|.++......+ + ....
T Consensus       129 ~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~-~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~  207 (363)
T PF00155_consen  129 HLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSV-LSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLL  207 (363)
T ss_dssp             EETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB---HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHH
T ss_pred             cccccccccccccccccccccceeeecccccccccc-cccccccchhhhhcccccceeeeeceeccccCCCccCcccccc
Confidence            458999999999632 1  46888888899999965 589999999999999999999999999764443321 1 1111


Q ss_pred             CC---CCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-----ccHHHHHHHH
Q 021893          119 EV---RPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-----EKLAERSAHL  189 (306)
Q Consensus       119 ~~---~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-----~~~~~~~~~~  189 (306)
                      ..   ...+.|+||.++ .|+ |+||+++++++++.++........  +.+.+.++.+.+.....     ++..++++++
T Consensus       208 ~~~~~vi~~~S~SK~~g~~Gl-RvG~i~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~  284 (363)
T PF00155_consen  208 DEDDNVIVVGSLSKSFGLPGL-RVGYIVAPPELIERLRRFQRSGLS--SSPMQAAAAAALSDPELVEKWLEELRERLREN  284 (363)
T ss_dssp             TTTSTEEEEEESTTTTTSGGG-TEEEEEEEHHHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccceeeeecccccccccc-ccccccchhhhhhhhhhccccccc--cchhhHHHHHhhhcccccccccccchhhHHHH
Confidence            11   223449999998 899 999999999999888753333322  66666655555544331     2345566666


Q ss_pred             HHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC----CCCEEEEeCCCCCCHH
Q 021893          190 GEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT----HDTIVRLTPPLSISSN  264 (306)
Q Consensus       190 ~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~~~~lRi~~~~~~t~~  264 (306)
                      .+.+++.|++.     +........|.++|+.+..    .+..++++.|+++ ||.+.|+    ..+++|+++ ...+++
T Consensus       285 ~~~l~~~L~~~-----~~~~~~~~~~~~~~~~~~~----~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~-a~~~~e  354 (363)
T PF00155_consen  285 RDLLREALEEI-----GITVLPPEAGFFLWVRLDP----NDAEELAQELLEEYGILVRPGSYFGVPGYIRISL-ASHSEE  354 (363)
T ss_dssp             HHHHHHHHHHT-----TSEEEHHSBSSEEEEEESH----HHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG-GCSCHH
T ss_pred             HHHHHHHHHHh-----hhheeeccCccEEEEEccc----chHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe-ccCCHH
Confidence            66666666665     2333444578888877764    3678999999999 9999983    377999997 588999


Q ss_pred             HHHHHHHHH
Q 021893          265 ELQEGSKAL  273 (306)
Q Consensus       265 ~i~~~~~~l  273 (306)
                      ++++++++|
T Consensus       355 ~~~~~~~~l  363 (363)
T PF00155_consen  355 DLEEALERL  363 (363)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHhhC
Confidence            999999986

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PTZ00377 alanine aminotransferase; Provisional

Probab=99.87  E-value=6.5e-21  Score=177.86  Aligned_cols=269  Identities=15%  Similarity=0.133  Sum_probs=173.3

Q ss_pred             ceEEEEecCCCCcccchhccc-CCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhc---CCc
Q 021893            3 AIIVSCCGCFHGRTLAAISMS-CDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKES---GDQ   60 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~---~~~   60 (306)
                      ..|++.+|+.++-...+..+. .+.+..-...|.|+.           ++.++.       .|+++|++.++..   +.+
T Consensus       139 ~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~  218 (481)
T PTZ00377        139 SDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGIT  218 (481)
T ss_pred             hhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCC
Confidence            468899999999887777665 343333333455544           122221       2679999998742   126


Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccc-ccc-cccc--CCC---------CCcEEEe
Q 021893           61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG-RML-ASDW--EEV---------RPDMVIL  127 (306)
Q Consensus        61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g-~~~-~~~~--~~~---------~~d~~s~  127 (306)
                      +++++++.++|+||.+ .+.+.+++|.++|++||+++|+||+|..+.+.+ ..+ ++..  .++         ...+.||
T Consensus       219 ~k~l~l~~P~NPTG~~-~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~  297 (481)
T PTZ00377        219 PRALVVINPGNPTGQV-LTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHST  297 (481)
T ss_pred             eeEEEEECCCCCCCcC-CCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecC
Confidence            8877777778999954 689999999999999999999999999764432 221 1100  011         1123389


Q ss_pred             cccc-c-CCcccceeeEe---CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--h----------ccHHHHHHHHH
Q 021893          128 GKAL-G-GGVIPVSAVLA---DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--D----------EKLAERSAHLG  190 (306)
Q Consensus       128 sK~~-~-~G~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~----------~~~~~~~~~~~  190 (306)
                      ||.+ + +|+ |+||+++   ++++++.+..... ..++.+.+++.++..+++...  +          ....+++++++
T Consensus       298 SK~~~~~~Gl-RiG~~~~~~~p~~li~~l~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr  375 (481)
T PTZ00377        298 SKGIIGECGR-RGGYFELTNIPPEVREQIYKLAS-INLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRA  375 (481)
T ss_pred             CcccccCCcC-ceEEEEEeCCCHHHHHHHHHHhh-eecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence            9985 6 899 9999986   8888888765432 344677888888887774210  0          11122334445


Q ss_pred             HHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCCh---------hhHHHHH-HHHHHCCceeccCC-------CCEE
Q 021893          191 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP---------VSAYDIC-LKMKERGILAKPTH-------DTIV  253 (306)
Q Consensus       191 ~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~---------~~~~~~~-~~l~~~Gi~~~~~~-------~~~l  253 (306)
                      +.+.+.|+.+    +++....+..|+++|+.+.-....         .....++ ..|.++||.+.|+.       .+++
T Consensus       376 ~~l~~~L~~~----~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~  451 (481)
T PTZ00377        376 ELLTDELNKI----EGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHF  451 (481)
T ss_pred             HHHHHHHhcC----CCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEE
Confidence            5555555443    223334455678888655310000         0123444 44556799999852       3589


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          254 RLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       254 Ri~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      |++.  ..+++++++++++|+++++ ++
T Consensus       452 Rls~--~~~~e~l~~~l~rl~~~~~-~~  476 (481)
T PTZ00377        452 RITI--LPPEEQIEEMVKKIKEFHE-SF  476 (481)
T ss_pred             EEEE--CCCHHHHHHHHHHHHHHHH-HH
Confidence            9994  4778899999999999988 54

>PTZ00376 aspartate aminotransferase; Provisional

Probab=99.87  E-value=6e-21  Score=174.51  Aligned_cols=217  Identities=15%  Similarity=0.150  Sum_probs=146.7

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc------ccccccC-
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR------MLASDWE-  118 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~------~~~~~~~-  118 (306)
                      |++.+++.++++.+++++++++.+||+||.. .+++.+++|.++|++||+++|+||+|.++.+.+.      ...+... 
T Consensus       162 d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~-~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~  240 (404)
T PTZ00376        162 DFDGMLEDLRTAPNGSVVLLHACAHNPTGVD-PTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERG  240 (404)
T ss_pred             CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcC
Confidence            7899999997653456788888999999955 6899999999999999999999999998754331      1111111 


Q ss_pred             CCCCcEEEeccccc-CCcccceee---EeCHHHHhhc----CCCCccCCCCCCHHHHHHHHHHHHHHh--------hccH
Q 021893          119 EVRPDMVILGKALG-GGVIPVSAV---LADKEVMLCI----QPGEHGSTFGGNPLASAVAIASLDVIR--------DEKL  182 (306)
Q Consensus       119 ~~~~d~~s~sK~~~-~G~~~~g~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~aa~~al~~~~--------~~~~  182 (306)
                      .....+.||||.++ +|+ |+||+   .+++++++.+    .........+.+.+++.++..+++.-.        ..+.
T Consensus       241 ~~vi~i~SfSK~~~~~Gl-RvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~  319 (404)
T PTZ00376        241 VEFLVAQSFSKNMGLYGE-RIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEM  319 (404)
T ss_pred             CcEEEEEeCCCccccccc-ccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence            12234459999999 999 99998   4677654433    221112222345677777776664321        0123


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccCCCCEEEEeCCCCC
Q 021893          183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPTHDTIVRLTPPLSI  261 (306)
Q Consensus       183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~~~lRi~~~~~~  261 (306)
                      .++++++++.+.+.|++..... .+....+..|.++|+.++        .++++.|.++ ||.+.|++    |++.. ..
T Consensus       320 ~~~~~~~r~~l~~~L~~~~~~~-~~~~~~p~gg~f~~~~~~--------~~~~~~L~~~~~v~v~p~~----Ris~~-~~  385 (404)
T PTZ00376        320 SGRIQNMRQLLYDELKALGSPG-DWEHIINQIGMFSFTGLT--------KEQVERLIEKYHIYLLDNG----RISVA-GL  385 (404)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCC-cccccccCceEEEecCCC--------HHHHHHHHHhCCEeecCCC----eEEEe-cc
Confidence            3455666666666666652110 122223556777777553        3678888877 99998873    99852 27


Q ss_pred             CHHHHHHHHHHHHHHHh
Q 021893          262 SSNELQEGSKALHDVLE  278 (306)
Q Consensus       262 t~~~i~~~~~~l~~~l~  278 (306)
                      +.++++.++++|++++.
T Consensus       386 ~~~~~~~~~~~l~~~~~  402 (404)
T PTZ00376        386 TSKNVDYVAEAIHDVVR  402 (404)
T ss_pred             CHHhHHHHHHHHHHHHh
Confidence            89999999999998875

>PRK08363 alanine aminotransferase; Validated

Probab=99.86  E-value=3.4e-20  Score=169.29  Aligned_cols=221  Identities=15%  Similarity=0.120  Sum_probs=146.7

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC-C--CCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE-E--VRP  122 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~-~--~~~  122 (306)
                      |++.+++.++   ++++++++++++|++|.. .+.+.+++|.++|+++|+++|+||+|.++...+...+.... .  ...
T Consensus       155 d~~~l~~~~~---~~~~~v~l~~p~NPtG~~-~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi  230 (398)
T PRK08363        155 DIDDIRKKIT---EKTKAIAVINPNNPTGAL-YEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVI  230 (398)
T ss_pred             CHHHHHhhCC---cceEEEEEECCCCCCCcC-cCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEE
Confidence            6788888776   467888888889999965 47999999999999999999999999876444432211111 1  112


Q ss_pred             cEEEeccccc-CCcccceeeEe--CHHHHhhcCCCC---ccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 021893          123 DMVILGKALG-GGVIPVSAVLA--DKEVMLCIQPGE---HGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELR  194 (306)
Q Consensus       123 d~~s~sK~~~-~G~~~~g~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~  194 (306)
                      .+.||||.++ +|+ |+||+++  ++++++.+....   ....++.+.+++.++..+++....  .+..++++++++.+.
T Consensus       231 ~~~SfSK~~~~~Gl-RiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~  309 (398)
T PRK08363        231 VMNGLSKVYFATGW-RLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIY  309 (398)
T ss_pred             EEecchhccCCccc-eEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence            2349999976 899 9999987  665555433211   112345677777777777753111  223455566666666


Q ss_pred             HHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHH-HHHHHCCceeccC------CCCEEEEeCCCCCCHHHHH
Q 021893          195 QHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDIC-LKMKERGILAKPT------HDTIVRLTPPLSISSNELQ  267 (306)
Q Consensus       195 ~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~-~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~  267 (306)
                      +.|++.    +++....+..|.++|+.++... .....+++ +.|.++||.+.|+      +++++|++.  ..++++++
T Consensus       310 ~~L~~~----~~~~~~~p~g~~~~~~~l~~~~-~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~--~~~~~~l~  382 (398)
T PRK08363        310 KRLNEI----PGISTTKPQGAFYIFPRIEEGP-WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVF--LPPVEILE  382 (398)
T ss_pred             HHHhcC----CCCEecCCCeEEEEEEEeccCC-CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe--cCCHHHHH
Confidence            665543    2222233456666776676411 11344554 5557889999875      257999994  56789999


Q ss_pred             HHHHHHHHHHh
Q 021893          268 EGSKALHDVLE  278 (306)
Q Consensus       268 ~~~~~l~~~l~  278 (306)
                      +++++|+++++
T Consensus       383 ~~l~~l~~~~~  393 (398)
T PRK08363        383 EAMDRFEEFMR  393 (398)
T ss_pred             HHHHHHHHHHH
Confidence            99999999887

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=99.86  E-value=8.2e-21  Score=171.62  Aligned_cols=213  Identities=21%  Similarity=0.237  Sum_probs=147.7

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~~~~~~~d~  124 (306)
                      |++.+++.++   +++++|+++.++|++|.+.+ .+.++++.+.|+ +|+++|+||+|.++.+.+. ...+...+...++
T Consensus       143 ~~~~l~~~~~---~~~~~v~l~~p~nptG~~~~-~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~  217 (367)
T PRK02731        143 DLDAMLAAVT---PRTRLVFIANPNNPTGTYLP-AEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNV  217 (367)
T ss_pred             CHHHHHHHhC---CCCcEEEEeCCCCCCCcCCC-HHHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCE
Confidence            7899998886   46788888899999997765 555555555543 5999999999986544332 1112212222333


Q ss_pred             ---EEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHH
Q 021893          125 ---VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFK  199 (306)
Q Consensus       125 ---~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~  199 (306)
                         .|+||.++ +|+ |+||+++++++++.+....  ..+..+.+++.++.+.++... -++..++++++.+.+++.|++
T Consensus       218 i~~~S~SK~~g~~G~-RiG~l~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~  294 (367)
T PRK02731        218 VVTRTFSKAYGLAGL-RVGYGIAPPEIIDALNRVR--QPFNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAE  294 (367)
T ss_pred             EEEeeehHhhcCccc-ceeeeeCCHHHHHHHHHcc--CCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               39999998 899 9999999999988876532  245567777777777665311 123444555555566666655


Q ss_pred             HHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          200 IQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       200 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      .+     ... .+..|.++|+.++.   ..++.++++.|.++||.+.++.    ++++|++++   +.++++.+++.|++
T Consensus       295 ~g-----~~~-~~~~g~~~~i~~~~---~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~e~~~l~~aL~~  362 (367)
T PRK02731        295 LG-----LEY-IPSVGNFILVDFDD---GKDAAEAYQALLKRGVIVRPVAGYGLPNALRITIG---TEEENRRFLAALKE  362 (367)
T ss_pred             CC-----Ccc-CCCCceEEEEECCC---CCCHHHHHHHHHHCCEEEEeCCCCCCCCeEEEecC---CHHHHHHHHHHHHH
Confidence            42     211 23467888988753   3467889999999999999862    578999953   78899999999988


Q ss_pred             HHh
Q 021893          276 VLE  278 (306)
Q Consensus       276 ~l~  278 (306)
                      +++
T Consensus       363 ~~~  365 (367)
T PRK02731        363 FLA  365 (367)
T ss_pred             HHh
Confidence            775

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.86  E-value=4.9e-20  Score=165.62  Aligned_cols=220  Identities=16%  Similarity=0.176  Sum_probs=158.6

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|++++++.++++ ++++.+++.++++++|.+.+    +++|.++|++||+++|+|++++ ++.  ..+....++.+..+
T Consensus       111 ~d~~~l~~~l~~~-~~~~~v~~~~~~~~~G~~~~----~~~i~~l~~~~~~~livD~~~s-~g~--~~~~~~~~~~d~~~  182 (355)
T TIGR03301       111 PDLNRIEEALAAD-PDITHVATVHHETTTGILNP----LEAIAKVARSHGAVLIVDAMSS-FGA--IPIDIEELDVDALI  182 (355)
T ss_pred             CCHHHHHHHHHhC-CCceEEEEEecCCcccchhH----HHHHHHHHHHcCCEEEEEeccc-cCC--cccchhhcCccEEE
Confidence            3799999999865 45677777778888898887    9999999999999999999886 321  22333444444445


Q ss_pred             EEecccccCCcccceeeEeCHHHHhhcCCCC-----------------ccCCCCCCHHHHHHHHHHHHHHhhcc----HH
Q 021893          125 VILGKALGGGVIPVSAVLADKEVMLCIQPGE-----------------HGSTFGGNPLASAVAIASLDVIRDEK----LA  183 (306)
Q Consensus       125 ~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~aa~~al~~~~~~~----~~  183 (306)
                      .+++|+++|+. ++|++++++++++.+....                 ....++.+...+.++.++++.+.+++    ..
T Consensus       183 ~s~~K~l~~~~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~  261 (355)
T TIGR03301       183 ASANKCLEGVP-GFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARI  261 (355)
T ss_pred             ecCCcccccCC-ceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHH
Confidence            68889998777 7899999999888765210                 11234567777778788888775433    45


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceee-EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC---CCEEEEeCCC
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---DTIVRLTPPL  259 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~~~lRi~~~~  259 (306)
                      ++++++++++++.|++++..   .... ....+.++++.++... ..+..++.+.|.++||.+.++.   .+++|++++.
T Consensus       262 ~~~~~~~~~~~~~L~~~g~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~  337 (355)
T TIGR03301       262 ARYRRNRELLVDGLRALGFQ---PLLPERWQSPIIVSFLYPDDP-DFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIG  337 (355)
T ss_pred             HHHHHHHHHHHHHHHHcCCe---eecCCCCCCCcEEEEECCCCC-cchHHHHHHHHHHCCEEEECCccccccEEEEecCC
Confidence            67778888888888775311   1111 1234556677665311 1345689999999999998864   2789999888


Q ss_pred             CCCHHHHHHHHHHHHHHH
Q 021893          260 SISSNELQEGSKALHDVL  277 (306)
Q Consensus       260 ~~t~~~i~~~~~~l~~~l  277 (306)
                      .+++++++.+++.|++++
T Consensus       338 ~~~~~~i~~~~~~l~~~~  355 (355)
T TIGR03301       338 EIDAADIERLLEAIKDAL  355 (355)
T ss_pred             CCCHHHHHHHHHHHHhhC
Confidence            889999999999998753

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=99.86  E-value=7.4e-21  Score=171.39  Aligned_cols=209  Identities=16%  Similarity=0.124  Sum_probs=143.1

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccc---cccCCCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLA---SDWEEVR  121 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~---~~~~~~~  121 (306)
                      |++.+++.++   +++++++++.++|++|.+. +.+.+.++.+.|+ +|+++|+||+|.++...+. ...   .+..+..
T Consensus       140 d~~~l~~~~~---~~~~~v~i~~p~NPtG~~~-~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~v  214 (359)
T PRK03158        140 DLEAMLKAID---EQTKIVWICNPNNPTGTYV-NHEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENL  214 (359)
T ss_pred             CHHHHHHhcC---CCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCE
Confidence            7888888776   4678888888899999776 4555555555553 6999999999987643321 111   1122222


Q ss_pred             CcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHH
Q 021893          122 PDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFK  199 (306)
Q Consensus       122 ~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~  199 (306)
                      ..+.||||.++ +|+ |+||+++++++++.+....  .++..+.+++.++.++++.-. .+...+.+++..+.+.+.|++
T Consensus       215 i~~~S~SK~~g~~Gl-RiG~~v~~~~~~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~  291 (359)
T PRK03158        215 IVLRTFSKAYGLAAL-RVGYGIASEELIEKLNIAR--PPFNTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKE  291 (359)
T ss_pred             EEEEechHhhcCcch-hhehhcCCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33459999999 899 9999999999988876533  246678888888888875311 012233334444444444443


Q ss_pred             HHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          200 IQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       200 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      .     +.. ..+..|.++|+.+.     .+..++++.|.++||.+.|+    .++++|++.   .+.++++.++++|++
T Consensus       292 ~-----~~~-~~~~~g~~i~~~~~-----~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~---~~~~~~~~l~~al~~  357 (359)
T PRK03158        292 Y-----GLF-YYPSQTNFIFVDTG-----RDANELFEALLKKGYIVRSGAALGFPTGVRITI---GLKEQNDKIIELLKE  357 (359)
T ss_pred             C-----CCe-eCCCcCcEEEEECC-----CCHHHHHHHHHHCCeEEeeCCCCCCCCeEEEec---CCHHHHHHHHHHHHH
Confidence            3     121 23456778887664     24678999999999999985    368999983   378999999999987


Q ss_pred             H
Q 021893          276 V  276 (306)
Q Consensus       276 ~  276 (306)
                      +
T Consensus       358 ~  358 (359)
T PRK03158        358 L  358 (359)
T ss_pred             h
Confidence            5

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.86  E-value=2e-20  Score=169.15  Aligned_cols=265  Identities=11%  Similarity=0.064  Sum_probs=166.5

Q ss_pred             eEEEEecCCCCcccchhcccCCcccc----ccCCCCC-----C--CcccccCC-------CHHHHHHHHHhcC----CcE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAI----RGFGPLL-----P--GHLKVDFG-------DITALEKIFKESG----DQI   61 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~----~~~~~~~-----~--~~~~~~~~-------d~~~le~~i~~~~----~~~   61 (306)
                      .+++++|++++......++..+....    ..+.+.+     .  .+..+|++       |+++|++.++...    +++
T Consensus        68 ~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~  147 (370)
T TIGR02539        68 EARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPP  147 (370)
T ss_pred             ceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCc
Confidence            45667777777655555543322111    0100111     1  13455664       8999999997421    357


Q ss_pred             EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceee
Q 021893           62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAV  141 (306)
Q Consensus        62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~  141 (306)
                      ++|+++++++++|.+.+    +++|.++|++||+++|+||+|+. +..+.  ....++.+.-+.|++|++++|. |+||+
T Consensus       148 ~lv~~~~p~~~~G~~~~----l~~i~~la~~~~~~livDea~~~-g~~~~--~~~~~~~di~v~s~sK~~~~~g-~~G~l  219 (370)
T TIGR02539       148 VLALLTHVDGEYGNLPD----AGKVAKVCREKGVPLLLNCAYTV-GRMPV--SAKEIGADFIVGSGHKSMAASG-PCGVL  219 (370)
T ss_pred             EEEEEECCCCCCccccC----HHHHHHHHHHcCCeEEEECcccc-CCcCC--CHHHcCCCEEEeeCcccccCCC-CEEEE
Confidence            88999999999999988    99999999999999999999983 11111  1112223333458999999776 89999


Q ss_pred             EeCHHHHhhcCCCCccCCC--------CCCHHHHHHHHHHHHHHhhc-cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE
Q 021893          142 LADKEVMLCIQPGEHGSTF--------GGNPLASAVAIASLDVIRDE-KLAERSAHLGEELRQHLFKIQQQFPNYVKEVR  212 (306)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~aa~~al~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~  212 (306)
                      ++++++++.+........+        .....++.++.++++...+. +...+..++.+++++.|++++..   .....+
T Consensus       220 ~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~g~~---~~~~~~  296 (370)
T TIGR02539       220 GMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELEDIGFI---QLGQKP  296 (370)
T ss_pred             EECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcE---EEccCC
Confidence            9999999887754321111        11112444555556543221 11222334456788888876321   000113


Q ss_pred             EeeeEEEEEEecC-----CChhhHHHHHHHHHHCCce-eccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          213 GRGLFNAVEFDKT-----ALPVSAYDICLKMKERGIL-AKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       213 ~~g~~~~i~~~~~-----~~~~~~~~~~~~l~~~Gi~-~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ....++.+.++..     +.......+.+.|+++||. ++++.++++|+++. ..+++++++++++|+++++ ++
T Consensus       297 s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~~~~~~iRis~~-~~t~e~i~~l~~~L~~~~~-~~  369 (370)
T TIGR02539       297 KEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRSGQTKYFKLSVY-GLTKEQVEYVVDSFEEIVE-EY  369 (370)
T ss_pred             CcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccCCcceEEEEEec-CCCHHHHHHHHHHHHHHHH-hc
Confidence            4556666655421     0012345789999999997 77765679999974 5799999999999999887 53

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=99.86  E-value=2.7e-20  Score=165.77  Aligned_cols=251  Identities=15%  Similarity=0.114  Sum_probs=161.2

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC---------cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCC
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG---------HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEA   73 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~   73 (306)
                      ..|++..|+.++-...+..  .+.+..-...|.++.         ...++. +++++++.++    ++++++++.++|+|
T Consensus        65 ~~I~it~Gs~~al~~~~~~--~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~----~~~~v~l~nP~NPT  137 (330)
T PRK05664         65 PQLLPVAGSQAAIQALPRL--RAPGRVGVLSPCYAEHAHAWRRAGHQVREL-DEAEVEAALD----SLDVLVVVNPNNPT  137 (330)
T ss_pred             CCEEECcCHHHHHHHHHHc--cCCCEEEEcCCChHHHHHHHHHcCCeEEEe-chhhHhhhhc----CCCEEEEeCCcCCC
Confidence            3578888888886555432  222222333344433         111222 3456776664    34444444456889


Q ss_pred             CcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccceeeEeCHHHHhhcC
Q 021893           74 GVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQ  152 (306)
Q Consensus        74 G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~  152 (306)
                      |.+ .+.+.+++|.++|+++|+++|+||+|.++............+....+.||||.++ +|+ |+||+++++++++.+.
T Consensus       138 G~~-~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~Gl-RiG~~v~~~~l~~~~~  215 (330)
T PRK05664        138 GRR-FDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGA-RLGFVLAEPALLRALA  215 (330)
T ss_pred             CCc-cCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccccCCCc-ceEEEEeCHHHHHHHH
Confidence            865 5788999999999999999999999986632222222221111223449999999 999 9999999999988877


Q ss_pred             CCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhH
Q 021893          153 PGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSA  231 (306)
Q Consensus       153 ~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~  231 (306)
                      ....  .+..+.+.+.++.++++... .+...+.++++++.+.+.|++.+     . ....+.+.++|+..+      +.
T Consensus       216 ~~~~--~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~~-----~-~~~~~~~~f~~~~~~------~~  281 (330)
T PRK05664        216 ELLG--PWTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRHG-----L-TPAGGCALFQWVRTE------DA  281 (330)
T ss_pred             HhcC--CCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHCC-----C-cccCCcceEEEEecC------CH
Confidence            5322  34556777777777775422 12345566666666666666541     1 112233366666543      45


Q ss_pred             HHHHHHHHHCCceeccC-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          232 YDICLKMKERGILAKPT-HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       232 ~~~~~~l~~~Gi~~~~~-~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .++.+.|.++||.+... ..+++|++..  .+.++++++.+.|+++.+
T Consensus       282 ~~~~~~l~~~gi~v~~f~~~~~iRis~~--~~~~~~~~l~~al~~~~~  327 (330)
T PRK05664        282 AALHEFLARRGILTRLFEQPASLRFGLP--ADEADWARLDQALLAYRK  327 (330)
T ss_pred             HHHHHHHHHCCeEEEECCCCCeEEEECC--CCHHHHHHHHHHHHHHHh
Confidence            78899999999999864 3579999944  367888888888877665

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=99.86  E-value=4.9e-20  Score=168.48  Aligned_cols=264  Identities=16%  Similarity=0.177  Sum_probs=168.5

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v   64 (306)
                      ..|++.+|+.+|...++.++..+....-...|.++.           +..++.       .|++.+++.+.   ++++++
T Consensus        97 ~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v  173 (403)
T TIGR01265        97 DDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALAD---EKTVAI  173 (403)
T ss_pred             HHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhC---cCccEE
Confidence            357888888888766666554332222222233321           122221       26889988886   467788


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccccC-C--CCCcEEEeccccc-CCcccce
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWE-E--VRPDMVILGKALG-GGVIPVS  139 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~~-~--~~~d~~s~sK~~~-~G~~~~g  139 (306)
                      ++++++|++|.. .+.+.+++|.++|+++|+++|+||+|.++.+.+..+ +...+ .  ....+.||||.++ +|+ |+|
T Consensus       174 ~i~~p~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGl-RiG  251 (403)
T TIGR01265       174 VVINPSNPCGSV-FSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGW-RLG  251 (403)
T ss_pred             EEecCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcc-eEE
Confidence            888888999954 578889999999999999999999999875554321 11111 1  1223449999976 899 999


Q ss_pred             eeEeC-H-H-----HHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCcee
Q 021893          140 AVLAD-K-E-----VMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVK  209 (306)
Q Consensus       140 ~~~~~-~-~-----~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~  209 (306)
                      |++++ + +     +++.+..... ..+..+.+.+.++..+++....   ++..++++++++.+.+.|+..    ++...
T Consensus       252 ~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~  326 (403)
T TIGR01265       252 WIIIHDPHGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDI----PGLVC  326 (403)
T ss_pred             EEEEeCchhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcC----CCcee
Confidence            99873 2 2     3333332211 2344577777777777753111   223444455555555555442    22322


Q ss_pred             eEEEeeeEEEEEEecCCC--hhhHHHHHHHH-HHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          210 EVRGRGLFNAVEFDKTAL--PVSAYDICLKM-KERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       210 ~~~~~g~~~~i~~~~~~~--~~~~~~~~~~l-~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ..+..|+++|+.++....  ..+..++++.+ .++||.+.|+    .++++|++.  ..+++++++++++|.++++
T Consensus       327 ~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~--~~~~~~l~~~l~~l~~~~~  400 (403)
T TIGR01265       327 PKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITI--TVPESMLEEACSRIKEFCE  400 (403)
T ss_pred             cCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEe--cCCHHHHHHHHHHHHHHHH
Confidence            346678899998864210  12466788886 4779999986    368999995  4578899999999999887

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.86  E-value=1.1e-19  Score=163.90  Aligned_cols=220  Identities=13%  Similarity=0.125  Sum_probs=159.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |++.++++++++ ++++++.+..+++++|.+.+    +++|.++|++||+++++|++|+ +|.  ..+....++.+..+.
T Consensus       116 d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~----i~~I~~l~~~~g~~livD~~~~-~g~--~~~~~~~~~~D~~~~  187 (363)
T TIGR02326       116 DVVEVEAILAAD-PAITHIALVHCETTTGILNP----IEAVAKLAHRHGKVTIVDAMSS-FGG--IPIDIAELHIDYLIS  187 (363)
T ss_pred             CHHHHHHHHhhC-CCccEEEEEeecCCccccCc----HHHHHHHHHHcCCEEEEEcccc-ccC--cccchhhcCccEEEe
Confidence            789999999865 35677888888999999998    9999999999999999999986 322  233344444433344


Q ss_pred             EecccccCCcccceeeEeCHHHHhhcCCCC------------------ccCCCCCCHHHHHHHHHHHHHHhhc----cHH
Q 021893          126 ILGKALGGGVIPVSAVLADKEVMLCIQPGE------------------HGSTFGGNPLASAVAIASLDVIRDE----KLA  183 (306)
Q Consensus       126 s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~aa~~al~~~~~~----~~~  183 (306)
                      +++|+++|+. ++|+++++++.++.+.+..                  ....|+.+...+.+..++++.+..+    +..
T Consensus       188 s~~K~l~~p~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~  266 (363)
T TIGR02326       188 SANKCIQGVP-GFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARH  266 (363)
T ss_pred             cCccccccCC-cceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHH
Confidence            7779998877 8899999998877654310                  1123456677777777888776543    356


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC---CCEEEEeCCC
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---DTIVRLTPPL  259 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~~~lRi~~~~  259 (306)
                      ++++++.+++++.|++++..   ..... ...+.+.++.+++.. ..+..++.+.|.++||.+.++.   .+.+|++++.
T Consensus       267 ~~~~~~~~~l~~~L~~~g~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~  342 (363)
T TIGR02326       267 QRYQQNQKTLVAGMRALGFE---PLLDDEIQSPIITSFYSPEDP-DYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIG  342 (363)
T ss_pred             HHHHHHHHHHHHHHHHcCCe---eccCcccCCceEEEEECCCCC-CCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCC
Confidence            78888888888888776322   11111 123445666665311 1356789999999999998863   4789999877


Q ss_pred             CCCHHHHHHHHHHHHHHHh
Q 021893          260 SISSNELQEGSKALHDVLE  278 (306)
Q Consensus       260 ~~t~~~i~~~~~~l~~~l~  278 (306)
                      .++.++++.++++|++++.
T Consensus       343 ~~~~edv~~~l~~l~~~l~  361 (363)
T TIGR02326       343 EVDAADITRLLTAIGKAMY  361 (363)
T ss_pred             CCCHHHHHHHHHHHHHHhC
Confidence            8899999999999998875

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>PRK05839 hypothetical protein; Provisional

Probab=99.85  E-value=3.3e-20  Score=167.97  Aligned_cols=253  Identities=13%  Similarity=0.058  Sum_probs=159.0

Q ss_pred             ceEEEEecCCCCcccchhccc--CCccccccCCCCCCC-----------cccccCC-----CHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMS--CDNEAIRGFGPLLPG-----------HLKVDFG-----DITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~--~~~~~~~~~~~~~~~-----------~~~~~~~-----d~~~le~~i~~~~~~~~~v   64 (306)
                      ..|++++|+.++-+..+....  .+....-...|.|+.           ++.++.+     +++..+..+    ++++++
T Consensus        84 ~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~~----~~~k~v  159 (374)
T PRK05839         84 NELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKEL----QEVDLV  159 (374)
T ss_pred             ceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhhh----ccccEE
Confidence            468888888877655544331  122222222344432           1233221     122222222    358888


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-c--------cCCCCCcEEEeccccc-CC
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-D--------WEEVRPDMVILGKALG-GG  134 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~--------~~~~~~d~~s~sK~~~-~G  134 (306)
                      +++.++|+||.+ .+.+.+++|.++|++||++||+||+|.++...+...++ .        ..+....+.||||.++ +|
T Consensus       160 ~i~nP~NPTG~~-~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G  238 (374)
T PRK05839        160 ILNSPNNPTGRT-LSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPG  238 (374)
T ss_pred             EEeCCCCCcCcc-cCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCcc
Confidence            888889999965 57999999999999999999999999976322221111 1        0112233459999987 89


Q ss_pred             cccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEe
Q 021893          135 VIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR  214 (306)
Q Consensus       135 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~  214 (306)
                      + |+||+++++++++.+........++.+.+.+.++..++.   .+++.+..   .+.++++.+.+...++ ..  .+..
T Consensus       239 l-RiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~---~~~~~~~~~~~~~~l~-~~--~p~g  308 (374)
T PRK05839        239 L-RSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWL---DDEHAEFF---RNIYAKNLKLAREILG-IT--IPPA  308 (374)
T ss_pred             c-eeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhc---cchHHHHH---HHHHHHHHHHHHHhcC-CC--CCCe
Confidence            9 999999999998887654333345556666666665553   22222222   2222222222222221 21  4567


Q ss_pred             eeEEEEEEecCCChhhHHHHHHHHHH-CCceeccC--------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          215 GLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPT--------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       215 g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~--------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      |.++|+.+++      ..++++.|++ +||.+.|+        .++++|++.  ..+.++++.++++|+++++
T Consensus       309 g~fi~~~~~~------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~--~~~~~~~~~~l~~l~~~l~  373 (374)
T PRK05839        309 TFYVWLPVDN------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIAL--VYDTPKLEKALEIIKTYLE  373 (374)
T ss_pred             eEEEEEeCCC------hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHhh
Confidence            8888987752      4578888875 89999985        148999995  4578999999999998875

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=99.85  E-value=3.9e-20  Score=164.74  Aligned_cols=211  Identities=18%  Similarity=0.161  Sum_probs=143.5

Q ss_pred             cccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccCC
Q 021893           41 KVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEE  119 (306)
Q Consensus        41 ~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~~  119 (306)
                      ..+++|++.+++.++    ++++++++.++|++|.+ ++.+.+++|.++|+++|+++|+||+|.++......... +..+
T Consensus       110 ~~~~~d~~~l~~~~~----~~~~v~i~~p~NPtG~~-~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~  184 (330)
T TIGR01140       110 VVELPDLDRLPAALE----ELDVLVLCNPNNPTGRL-IPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFP  184 (330)
T ss_pred             EEEeCCHHHHHhhcc----cCCEEEEeCCCCCCCCC-CCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCC
Confidence            333448999998885    34566666678899865 58999999999999999999999999876433221111 1111


Q ss_pred             CCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHH
Q 021893          120 VRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHL  197 (306)
Q Consensus       120 ~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L  197 (306)
                      ....+.|+||.++ +|+ |+||+++++++++.+....  ..+..+.+++.++...++.-.- ++..++++++.+.+++.|
T Consensus       185 ~~i~~~S~SK~~g~~G~-R~G~i~~~~~~~~~l~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L  261 (330)
T TIGR01140       185 GLVVLRSLTKFFGLAGL-RLGFVVAHPALLARLREAL--GPWTVNGPARAAGRAALADTAWQAATRARLAAERARLAALL  261 (330)
T ss_pred             CEEEEEecchhhcCchh-hhhheeCCHHHHHHHHhcC--CCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Confidence            1222349999999 899 9999999999998887643  2455667777777666653211 223455555555565555


Q ss_pred             HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHH
Q 021893          198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSK  271 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~  271 (306)
                      ++.    + .+...++.|.++|+.+++      ..++++.|+++||.+.|+      +.+++|+++  ....++ +.++.
T Consensus       262 ~~~----~-~~~~~~~~~~f~~~~~~~------~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~--~~~~~~-~~~~~  327 (330)
T TIGR01140       262 ARL----G-GLEVVGGTALFLLVRTPD------AAALHEALARRGILIRDFDNFPGLDPRYLRFAL--PTDEEN-DRLEE  327 (330)
T ss_pred             HhC----C-CceECCCCCeEEEEEcCC------HHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEe--cCHHHH-HHHHH
Confidence            554    2 222334567888887652      468999999999999985      246899994  444455 77766


Q ss_pred             HH
Q 021893          272 AL  273 (306)
Q Consensus       272 ~l  273 (306)
                      +|
T Consensus       328 ~l  329 (330)
T TIGR01140       328 AL  329 (330)
T ss_pred             hh
Confidence            65

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=99.85  E-value=1e-19  Score=164.56  Aligned_cols=213  Identities=22%  Similarity=0.312  Sum_probs=160.3

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      +++.+++.++   ++|++|.++.++|.+|.+.|    +++|.++||++|+++++|.+|+    .|. ...+...+..|++
T Consensus       151 ~~~~~~~~i~---~~Tklvais~vSn~tG~~~p----v~~I~~la~~~ga~v~VDaaq~----~~h-~~idv~~l~~Df~  218 (405)
T COG0520         151 DLDALEKLIT---PKTKLVALSHVSNVTGTVNP----VKEIAELAHEHGALVLVDAAQA----AGH-LPIDVQELGCDFL  218 (405)
T ss_pred             CHHHHHHhcC---CCceEEEEECccccccccch----HHHHHHHHHHcCCEEEEECccc----cCc-cCCCchhcCCCEE
Confidence            5788888777   78999999999999999999    9999999999999999999997    222 1234444567887


Q ss_pred             Eec--ccccCCcccceeeEeCHHHHhhcCCCCcc------------CCC----------CCCHHHHHHHHHHHHHHhh--
Q 021893          126 ILG--KALGGGVIPVSAVLADKEVMLCIQPGEHG------------STF----------GGNPLASAVAIASLDVIRD--  179 (306)
Q Consensus       126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~------------~~~----------~~~~~~~~aa~~al~~~~~--  179 (306)
                      .||  |++.|.- ++|++++++++++.+.|...+            .++          +.+..+..+..++++.+.+  
T Consensus       219 afsgHKwl~gP~-GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig  297 (405)
T COG0520         219 AFSGHKWLLGPT-GIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIG  297 (405)
T ss_pred             EEcccccccCCC-ceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHh
Confidence            776  9888776 889999999999998664111            111          3345555566677777665  


Q ss_pred             -ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE--EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-------
Q 021893          180 -EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR--GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-------  249 (306)
Q Consensus       180 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~--~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------  249 (306)
                       +++.++.+++.+++.+.|+++...   .++...  ..+.++.|.+.    +.+..+++..|.++||.++.+.       
T Consensus       298 ~~~i~~~e~~L~~~~~~~L~~~~~v---~i~g~~~~~r~~~vsF~v~----~~~~~dv~~~L~~~gI~vr~g~~ca~p~~  370 (405)
T COG0520         298 MEAIEAHERELTEYLLEGLSELPGV---EIYGPPDADRGGIVSFNVK----GIHPHDVATLLDEKGIAVRAGHHCAQPLH  370 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCe---EEecCCcccCceEEEEEeC----CCCHHHHHHHHHhCCeEEEeccccccHHH
Confidence             456777777777777777776321   111222  35777777777    3678999999999998888652       


Q ss_pred             -----CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          250 -----DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       250 -----~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                           ...+|+|++.++|++||+.+++.|++..+
T Consensus       371 ~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~  404 (405)
T COG0520         371 RLLGVDATIRASLHLYNTEEDVDRLLEALKKALA  404 (405)
T ss_pred             HhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence                 23499999999999999999999988753

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=99.85  E-value=1.7e-20  Score=171.88  Aligned_cols=207  Identities=14%  Similarity=0.143  Sum_probs=140.7

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-ccc-ccCC---CCCcEEEeccccc-
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LAS-DWEE---VRPDMVILGKALG-  132 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~-~~~~---~~~d~~s~sK~~~-  132 (306)
                      +++++++++.++|+||. +.+.+.+++|.++|++|+++||+||+|.++...+.. .+. ...+   ....+.||||.++ 
T Consensus       175 ~~~k~i~l~nP~NPTG~-~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~  253 (409)
T PRK07590        175 EKVDIIYLCFPNNPTGT-VLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGF  253 (409)
T ss_pred             cCceEEEEeCCCCCcCC-cCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCC
Confidence            46788888788899995 468999999999999999999999999987544421 111 1111   1233458999998 


Q ss_pred             CCcccceeeEeCHHHHhhcC-----------CCCccCCC-CCCHHHHHHHHHHHHHH-h--hccHHHHHHHHHHHHHHHH
Q 021893          133 GGVIPVSAVLADKEVMLCIQ-----------PGEHGSTF-GGNPLASAVAIASLDVI-R--DEKLAERSAHLGEELRQHL  197 (306)
Q Consensus       133 ~G~~~~g~~~~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~aa~~al~~~-~--~~~~~~~~~~~~~~l~~~L  197 (306)
                      +|+ |+||+++++++++.+.           .......+ ..+.+.+.++..+++.- .  .++..+.++++++.+.+.|
T Consensus       254 pGl-RiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L  332 (409)
T PRK07590        254 TGT-RCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGL  332 (409)
T ss_pred             cCc-eeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            999 9999999999886321           00111222 35667777766666421 0  1223455556666666666


Q ss_pred             HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH-CCceeccC------CCCEEEEeCCCCCCHHHHHHHH
Q 021893          198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPT------HDTIVRLTPPLSISSNELQEGS  270 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~  270 (306)
                      +..     +.....+..|+++|+.+++   ..+..++++.|++ +||.+.|+      +.+++|++  +..+++++++++
T Consensus       333 ~~~-----~~~~~~~~g~~f~wi~~~~---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~~~~~~~l~~~l  402 (409)
T PRK07590        333 ESA-----GFEVYGGVNAPYIWVKTPD---GMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLS--AFGSRENVLEAM  402 (409)
T ss_pred             Hhc-----CCceecCCcceEEEEECCC---CCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEE--ccCCHHHHHHHH
Confidence            654     1222223467788998874   3456778888875 69999875      24799999  456899999999


Q ss_pred             HHHHHHH
Q 021893          271 KALHDVL  277 (306)
Q Consensus       271 ~~l~~~l  277 (306)
                      ++|.+++
T Consensus       403 ~rl~~~~  409 (409)
T PRK07590        403 ERIKKAL  409 (409)
T ss_pred             HHHHhhC
Confidence            9998753

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=99.85  E-value=5.6e-20  Score=165.13  Aligned_cols=251  Identities=18%  Similarity=0.175  Sum_probs=161.9

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-----CCHHHHHHHHHhcCCcEEEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-----GDITALEKIFKESGDQIAGFLF   66 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-----~d~~~le~~i~~~~~~~~~v~v   66 (306)
                      ..|++.+|+.++-...+..+..+.+..-...|.++.           ++.++.     .|++++++.++.  .+++++++
T Consensus        77 ~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~--~~~k~v~l  154 (351)
T PRK14807         77 TNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEK--YQPKLVFL  154 (351)
T ss_pred             ccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhc--cCCCEEEE
Confidence            357777777776555544443332222122233222           122221     368999998874  36888888


Q ss_pred             ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCCcEEEeccccc-CCcccceeeEeC
Q 021893           67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDMVILGKALG-GGVIPVSAVLAD  144 (306)
Q Consensus        67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~d~~s~sK~~~-~G~~~~g~~~~~  144 (306)
                      ++++|++|...+    .+++.++|++++.++|+||+|.++. ...... .+..+....+.||||.++ +|+ |+||++++
T Consensus       155 ~~p~NPtG~~~~----~~~l~~l~~~~~~~~ivDe~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~Gl-RiG~~v~~  228 (351)
T PRK14807        155 CNPNNPTGSVIE----REDIIKIIEKSRGIVVVDEAYFEFY-GNTIVDVINEFENLIVLRTLSKAFGLAGL-RVGYAVAN  228 (351)
T ss_pred             eCCCCCCCCCCC----HHHHHHHHHhCCCEEEEeCcchhhc-ccchHHHhhhCCCEEEEecchHhcccchh-ceeeeecC
Confidence            889999998877    7777788888888999999998763 111111 111222233459999998 999 99999999


Q ss_pred             HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec
Q 021893          145 KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK  224 (306)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~  224 (306)
                      +++++.+.....  .+..+.+++.++...++...-++..++++++++.+.+.|++.    +++. ..+..|.++|+.++ 
T Consensus       229 ~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~----~g~~-~~~~~~~~~~i~~~-  300 (351)
T PRK14807        229 ENILKYLNLVKS--PYNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKI----PGIK-VYPSKTNFILVKFK-  300 (351)
T ss_pred             HHHHHHHHHccC--CCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhC----CCcE-ECcCCccEEEEEcC-
Confidence            999988765332  355577777777777753211223344455555555555432    2232 23455777787765 


Q ss_pred             CCChhhHHHHHHHHHHCCceeccC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          225 TALPVSAYDICLKMKERGILAKPT-----HDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       225 ~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                           +..++++.|.++||.+.+.     .++++|+++   .+.++.+.+++.|++++
T Consensus       301 -----~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~---~~~~~~~~l~~~l~~~~  350 (351)
T PRK14807        301 -----DADYVYQGLLERGILVRDFSKVEGLEGALRITV---SSCEANDYLINGLKELL  350 (351)
T ss_pred             -----CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEc---CCHHHHHHHHHHHHHhh
Confidence                 2567899999999998764     257899994   35678888888887754

>PRK09275 aspartate aminotransferase; Provisional

Probab=99.85  E-value=1.7e-20  Score=173.85  Aligned_cols=269  Identities=14%  Similarity=0.204  Sum_probs=164.1

Q ss_pred             eEEEEecCCCCcccchhc-----ccCCccccccCCCCCCC-----------c--cccc-------CCCHHHHHHHHHhcC
Q 021893            4 IIVSCCGCFHGRTLAAIS-----MSCDNEAIRGFGPLLPG-----------H--LKVD-------FGDITALEKIFKESG   58 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~-----~~~~~~~~~~~~~~~~~-----------~--~~~~-------~~d~~~le~~i~~~~   58 (306)
                      .|++.+|+.+|-..+..+     +..+.+..-...|.++.           .  +.++       ..|++.++++++   
T Consensus       163 ~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~---  239 (527)
T PRK09275        163 DLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD---  239 (527)
T ss_pred             eEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC---
Confidence            788999999887766554     34433333233344322           1  1221       126788888776   


Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHH--cCCEEEEehhhhccccccccccccc-CCCCCcEEEeccccc-CC
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK--YNILMIADEIQSGLARSGRMLASDW-EEVRPDMVILGKALG-GG  134 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~--~gi~li~De~~~g~~~~g~~~~~~~-~~~~~d~~s~sK~~~-~G  134 (306)
                      +++++++++.++|++|.+ .+++.+++|.++|++  +|++||+||+|..|......+ ... ......+.||||.++ +|
T Consensus       240 ~~tkai~l~nP~NPTG~v-~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~-~~~~~~~~I~v~SfSK~f~mtG  317 (527)
T PRK09275        240 PSIKALFLVNPSNPPSVA-MSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSL-FAVLPYNTILVYSFSKYFGATG  317 (527)
T ss_pred             CCCCEEEEeCCcCCcCCC-CCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCH-HHhCCCCEEEEeehhhhccCcH
Confidence            578899988889999965 589999999999965  599999999999774211111 111 112233459999998 99


Q ss_pred             cccceeeEeCHH-----HHhhc--------------------------------CCCCccCCCCCCHHHHHH-HHHHH-H
Q 021893          135 VIPVSAVLADKE-----VMLCI--------------------------------QPGEHGSTFGGNPLASAV-AIASL-D  175 (306)
Q Consensus       135 ~~~~g~~~~~~~-----~~~~~--------------------------------~~~~~~~~~~~~~~~~~a-a~~al-~  175 (306)
                      | |+||++++++     +++.+                                +.....++.+.+.+.+.+ ++.++ .
T Consensus       318 ~-RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~a  396 (527)
T PRK09275        318 W-RLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFA  396 (527)
T ss_pred             h-HHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence            9 9999999876     43333                                122233445556555554 32111 1


Q ss_pred             HHhhccHHHHHHHHHHHHHHHHHHHHhhCC-CceeeEEEeeeEEEEEEecCCC-------------hhhHHHHHHHHHHC
Q 021893          176 VIRDEKLAERSAHLGEELRQHLFKIQQQFP-NYVKEVRGRGLFNAVEFDKTAL-------------PVSAYDICLKMKER  241 (306)
Q Consensus       176 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~g~~~~i~~~~~~~-------------~~~~~~~~~~l~~~  241 (306)
                      .+...  .++.++..+.++++.+.+...++ +.....+..+.++++++.....             ..+..+|+.+|+++
T Consensus       397 ll~~~--~~~~~~~~~~~~~Rr~~l~~~Lg~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e  474 (527)
T PRK09275        397 LLDEE--DAYKKAMKDIIRRRYKALYEGLGLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEE  474 (527)
T ss_pred             HHhCc--hHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhc
Confidence            12221  11222223333333322222221 1222345677888887764210             12467788888766


Q ss_pred             -CceeccC-----CCCEEEEeCCCC-CCHHHHHHHHHHHHHHHhhhcCC
Q 021893          242 -GILAKPT-----HDTIVRLTPPLS-ISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       242 -Gi~~~~~-----~~~~lRi~~~~~-~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                       ||.+.|+     ..+++|++  +. .+++++.++.++|++.+. ++.+
T Consensus       475 ~gV~v~PG~~Fg~~~~~vRis--~a~~~~~~~~~~~~rl~~~l~-~y~~  520 (527)
T PRK09275        475 TGVVLLPGGGFGGPEWSVRVS--LANLNEEDYAKIGKAIRKLLD-EYYE  520 (527)
T ss_pred             CCEEEeCchhhCCCCCeEEEE--EecCCHHHHHHHHHHHHHHHH-HHHH
Confidence             9999986     24789999  44 588999999999999998 7643

>PRK06836 aspartate aminotransferase; Provisional

Probab=99.85  E-value=7.9e-20  Score=166.64  Aligned_cols=217  Identities=15%  Similarity=0.180  Sum_probs=151.6

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHH------cCCEEEEehhhhcccccccccc--ccc
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK------YNILMIADEIQSGLARSGRMLA--SDW  117 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~------~gi~li~De~~~g~~~~g~~~~--~~~  117 (306)
                      |+++++++++   ++++++++++++|++|.. .+.+.+++|.++|++      ||+++|+||+|.++...+....  ...
T Consensus       157 d~~~l~~~~~---~~~~~v~~~~p~NPtG~~-~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~  232 (394)
T PRK06836        157 DLDALEAAIT---PKTKAVIINSPNNPTGVV-YSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKY  232 (394)
T ss_pred             CHHHHHhhcC---cCceEEEEeCCCCCCCcC-CCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHc
Confidence            6899999886   468888988899999965 578999999999999      8999999999997744432211  122


Q ss_pred             CCCCCcEEEeccccc-CCcccceeeEeCHHHHhh------cCCCCcc-CCCCCCHHHHHHHHHHHHHHhhccHHHHHHHH
Q 021893          118 EEVRPDMVILGKALG-GGVIPVSAVLADKEVMLC------IQPGEHG-STFGGNPLASAVAIASLDVIRDEKLAERSAHL  189 (306)
Q Consensus       118 ~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~  189 (306)
                      ++....+.|+||.++ +|+ |+||+++++++.+.      +...... ..+..+.+.+.++...++.   ....+.++++
T Consensus       233 ~~~~i~~~S~SK~~~~pGl-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~---~~~~~~~~~~  308 (394)
T PRK06836        233 YDNSIVVYSFSKSLSLPGE-RIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDA---TVDVSIYKRN  308 (394)
T ss_pred             cCcEEEEecchhhccCcce-eeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCC---hHHHHHHHHH
Confidence            222233458999999 899 99999998775321      1111111 1234455666665544432   1124455666


Q ss_pred             HHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHH
Q 021893          190 GEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNE  265 (306)
Q Consensus       190 ~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~  265 (306)
                      ++.+.+.|++.     ++....+..|.++|+.++.    .+..++++.|.++||.+.|+.    .+++|+++.  .++++
T Consensus       309 r~~l~~~L~~~-----g~~~~~~~gg~~~~~~~~~----~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~--~~~~~  377 (394)
T PRK06836        309 RDLLYDGLTEL-----GFECVKPQGAFYLFPKSPE----EDDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC--VDTET  377 (394)
T ss_pred             HHHHHHHHHhC-----CCEeecCCceEEEEEeCCC----CCHHHHHHHHHhCCEEEECchhcCCCCeEEEEec--CCHHH
Confidence            66666666654     2333344567788887663    256778899999999999862    579999964  68999


Q ss_pred             HHHHHHHHHHHHhhhcC
Q 021893          266 LQEGSKALHDVLELDLP  282 (306)
Q Consensus       266 i~~~~~~l~~~l~~~~~  282 (306)
                      +++++++|+++++ ++.
T Consensus       378 ~~~~i~~l~~~l~-~~~  393 (394)
T PRK06836        378 IERSLPAFEKLAK-EYK  393 (394)
T ss_pred             HHHHHHHHHHHHH-Hhc
Confidence            9999999999998 764

>PRK09265 aminotransferase AlaT; Validated

Probab=99.85  E-value=9e-20  Score=166.84  Aligned_cols=223  Identities=13%  Similarity=0.134  Sum_probs=146.7

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-ccCC--CC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWEE--VR  121 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~~~--~~  121 (306)
                      |++++++.++   +++++++++.++|++|.+ .+.+.+++|.++|+++|+++|+||+|.++.+.+... +. ....  ..
T Consensus       157 d~~~l~~~~~---~~~~~v~l~~P~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~v  232 (404)
T PRK09265        157 DLDDIRSKIT---PRTKAIVIINPNNPTGAV-YSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLC  232 (404)
T ss_pred             CHHHHHHhcc---ccceEEEEECCCCCCCcC-CCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceE
Confidence            6888888886   467787777778899965 478999999999999999999999999875444221 11 1111  11


Q ss_pred             CcEEEeccccc-CCcccceeeEe--CHH----HHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHH---HHHHHHH
Q 021893          122 PDMVILGKALG-GGVIPVSAVLA--DKE----VMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLA---ERSAHLG  190 (306)
Q Consensus       122 ~d~~s~sK~~~-~G~~~~g~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~---~~~~~~~  190 (306)
                      ..+.||||.++ +|+ |+||++.  +++    +++.+... ....++.+.+++.++..+++.... +++.   +++.+.+
T Consensus       233 i~~~S~SK~~~~pGl-RiG~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r  310 (404)
T PRK09265        233 VTFNGLSKAYRVAGF-RVGWMVLSGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQR  310 (404)
T ss_pred             EEEecchhhccCccc-ceEEEEEeCchHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHH
Confidence            22348899996 899 9999985  343    33333211 122345677777777777642111 1111   2344444


Q ss_pred             HHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC--hhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCC
Q 021893          191 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL--PVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSIS  262 (306)
Q Consensus       191 ~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~--~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t  262 (306)
                      +.+.+.|++.    ++.....+..|+++|+.++....  ..+...+.+.|.++||.+.|+      .++++|++.  ..+
T Consensus       311 ~~~~~~L~~~----~~~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~--~~~  384 (404)
T PRK09265        311 DRAWELLNAI----PGVSCVKPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVT--LPR  384 (404)
T ss_pred             HHHHHHHhcC----CCCcccCCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEe--CCC
Confidence            4555555432    22333445678889988874210  113445677888999999875      257999995  578


Q ss_pred             HHHHHHHHHHHHHHHhhhc
Q 021893          263 SNELQEGSKALHDVLELDL  281 (306)
Q Consensus       263 ~~~i~~~~~~l~~~l~~~~  281 (306)
                      .+++++++++|+++++ ..
T Consensus       385 ~e~l~~~l~rl~~~l~-~~  402 (404)
T PRK09265        385 VDDLEEAIGRIGRFLS-GY  402 (404)
T ss_pred             HHHHHHHHHHHHHHHH-Hh
Confidence            9999999999999887 54

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=99.85  E-value=2.2e-19  Score=164.21  Aligned_cols=211  Identities=16%  Similarity=0.152  Sum_probs=149.9

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |++++++.++   +++++|++++++|++|.+.+    +++|.++|+++|+++++|++|+ ++..  .+...  .+.+|+.
T Consensus       149 d~~~l~~~i~---~~t~lv~i~~~~n~tG~~~~----~~~i~~l~~~~g~~~ivD~a~~-~g~~--~~~~~--~~~~d~~  216 (401)
T PRK10874        149 DVDLLPELIT---PRTRILALGQMSNVTGGCPD----LARAITLAHQAGMVVMVDGAQG-AVHF--PADVQ--ALDIDFY  216 (401)
T ss_pred             CHHHHHHhcC---cCcEEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEECCcc-cccc--cCCch--hcCCCEE
Confidence            7899999886   57899999999999999988    9999999999999999999996 1111  12222  3346665


Q ss_pred             --EecccccCCcccceeeEeCHHHHhhcCCCCcc------------------C---CCCCCHHHHHHHHHHHHHHhhcc-
Q 021893          126 --ILGKALGGGVIPVSAVLADKEVMLCIQPGEHG------------------S---TFGGNPLASAVAIASLDVIRDEK-  181 (306)
Q Consensus       126 --s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~------------------~---~~~~~~~~~~aa~~al~~~~~~~-  181 (306)
                        |++|.++ .. ++|++++++++++.+.+....                  .   ..+.+..++.++.++++.+.+.+ 
T Consensus       217 ~~s~~K~~g-p~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~  294 (401)
T PRK10874        217 AFSGHKLYG-PT-GIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDI  294 (401)
T ss_pred             EEecccccC-CC-ccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCH
Confidence              5559664 33 578999999988876542110                  0   11345667777778888775533 


Q ss_pred             --HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----------
Q 021893          182 --LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----------  249 (306)
Q Consensus       182 --~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----------  249 (306)
                        ..++.+++.+++++.|+++    ++........+.++.+.++.    ....++.+.|.++||.++++.          
T Consensus       295 ~~~~~~~~~l~~~l~~~l~~~----~g~~~~~~~~~~i~~~~~~~----~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~  366 (401)
T PRK10874        295 NQAESWSRSLATLAEDALAKL----PGFRSFRCQDSSLLAFDFAG----VHHSDLVTLLAEYGIALRAGQHCAQPLLAAL  366 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHhcC----CCEEEeCCCCCcEEEEEECC----cCHHHHHHHHHHCCcEEeccccchHHHHHHh
Confidence              4555556666666666543    22222112334456666542    346788999999999988642          


Q ss_pred             --CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          250 --DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       250 --~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                        .+++|++++..+|++|++.+++.|+++++
T Consensus       367 g~~~~iRiS~~~~nt~edid~ll~al~~~~~  397 (401)
T PRK10874        367 GVTGTLRASFAPYNTQSDVDALVNAVDRALE  397 (401)
T ss_pred             CCCCEEEEEecccCCHHHHHHHHHHHHHHHH
Confidence              47899999999999999999999999887

>PRK08637 hypothetical protein; Provisional

Probab=99.85  E-value=1.3e-19  Score=164.95  Aligned_cols=267  Identities=12%  Similarity=0.113  Sum_probs=168.9

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC------------cccccC------CCHHHHHHHHHh-cCCcEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG------------HLKVDF------GDITALEKIFKE-SGDQIAGF   64 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~------~d~~~le~~i~~-~~~~~~~v   64 (306)
                      .|++..|+.++-...+..+..+.+..-...|.++.            ++.+|.      .|++++++.++. ..+.+.++
T Consensus        71 ~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~  150 (388)
T PRK08637         71 LPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIV  150 (388)
T ss_pred             eeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEE
Confidence            46777888877766655555443322222232222            223332      268999988872 11345567


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHH-----cCCEEEEehhhhccccccccc-c-c-ccCCCCCc--EE---Eecccc
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSK-----YNILMIADEIQSGLARSGRML-A-S-DWEEVRPD--MV---ILGKAL  131 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~-----~gi~li~De~~~g~~~~g~~~-~-~-~~~~~~~d--~~---s~sK~~  131 (306)
                      +++.++||||. +.+++.+++|.++|++     |++++|+||+|.++.+.+... + . ...+....  ++   |+||.+
T Consensus       151 ~~~~P~NPTG~-~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~  229 (388)
T PRK08637        151 ILNFPNNPTGY-TPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEE  229 (388)
T ss_pred             EEeCCCCCCCC-CCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccC
Confidence            77778999995 5689999999999886     999999999999875554321 1 1 11111122  22   799987


Q ss_pred             c-CCcccceeeEeC------HHHHhhcCCC----CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Q 021893          132 G-GGVIPVSAVLAD------KEVMLCIQPG----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKI  200 (306)
Q Consensus       132 ~-~G~~~~g~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~  200 (306)
                      + +|+ |+||++.+      +++++.+...    .....+..+.+++.++...++   +..+.+++++....++++.+.+
T Consensus       230 ~~pGl-RlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~---~~~~~~~~~~~~~~~~~r~~~~  305 (388)
T PRK08637        230 FVWGF-RVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALN---SPEFDKEKQEKFQILKERYEKT  305 (388)
T ss_pred             CCccc-ceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHH
Confidence            7 899 99999853      5666665421    111234567778888777664   2233444444433343332221


Q ss_pred             ---HhhC---CCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHH
Q 021893          201 ---QQQF---PNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTHDTIVRLTPPLSISSNELQEGSKAL  273 (306)
Q Consensus       201 ---~~~~---~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l  273 (306)
                         ....   +.+....+..|.++|+.++.    .++.++++.|+ ++||.+.+.+.+++|++... .+.++++.++++|
T Consensus       306 ~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~----~~~~~l~~~l~~~~gv~~~~~~~~~iRi~~~~-~~~~~i~~~~~~l  380 (388)
T PRK08637        306 KEVLYDGKYDDAWQAYPFNSGYFMCLKLKG----VDAEELRVHLLEKYGIGTIALNETDLRIAFSC-VEEEDIPELFDSI  380 (388)
T ss_pred             HHHHHhhCCCCCcccccccceEEEEecCCh----HHHHHHHHHHhhhcceEEEeccCCceEEEeec-CCHHHHHHHHHHH
Confidence               1111   11223344678888988762    45778999996 56998877667899999643 5789999999999


Q ss_pred             HHHHhhhc
Q 021893          274 HDVLELDL  281 (306)
Q Consensus       274 ~~~l~~~~  281 (306)
                      .++++ .+
T Consensus       381 ~~~~~-~~  387 (388)
T PRK08637        381 YKAIK-DL  387 (388)
T ss_pred             HHHHH-hc
Confidence            99987 54

>cd00609 AAT_like Aspartate aminotransferase family

Probab=99.85  E-value=8.7e-20  Score=163.31  Aligned_cols=205  Identities=22%  Similarity=0.233  Sum_probs=152.3

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc----ccccCCCCCcEEEeccccc-C
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML----ASDWEEVRPDMVILGKALG-G  133 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~----~~~~~~~~~d~~s~sK~~~-~  133 (306)
                      +++++|+++++++++|.. .+.+.+++|.++|+++|+++|+|++|+++...+...    .....+....+.|++|.++ +
T Consensus       131 ~~~~~v~i~~~~~~tG~~-~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~  209 (350)
T cd00609         131 PKTKLLYLNNPNNPTGAV-LSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLP  209 (350)
T ss_pred             ccceEEEEECCCCCCCcc-cCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCc
Confidence            679999999999999965 578889999999999999999999999765544432    1222223333458999999 8


Q ss_pred             CcccceeeEeCH-HHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCceee
Q 021893          134 GVIPVSAVLADK-EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--DEKLAERSAHLGEELRQHLFKIQQQFPNYVKE  210 (306)
Q Consensus       134 G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~  210 (306)
                      |. ++|++++++ ++++.++......++..+...+.++..+++...  .+...++++++.+++++.|++....    ...
T Consensus       210 g~-~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~----~~~  284 (350)
T cd00609         210 GL-RIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPL----VVV  284 (350)
T ss_pred             cc-ceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCc----ccc
Confidence            98 999999998 788888765555556777788888777777652  2445667777777777777765322    113


Q ss_pred             EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893          211 VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALH  274 (306)
Q Consensus       211 ~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~  274 (306)
                      ....|.++++.+..   ......+.+.|.++||.+.++      ...++|++++..  ++|++.++++|+
T Consensus       285 ~~~~g~~~~~~~~~---~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~  349 (350)
T cd00609         285 KPSGGFFLWLDLPE---GDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA  349 (350)
T ss_pred             CCCccEEEEEecCC---CChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence            45677888887764   224556677777889999976      567999998766  999999999886

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=99.85  E-value=3e-20  Score=168.47  Aligned_cols=210  Identities=12%  Similarity=0.120  Sum_probs=144.8

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~d~  124 (306)
                      |++++++.++.  ++++++++++++|++|.+.+    .+++.++++.. +++|+||+|.+|...+.... .+..+....+
T Consensus       163 d~~~l~~~~~~--~~~~~v~l~~P~NPTG~~~~----~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~  235 (380)
T PLN03026        163 DVPRIVEAVET--HKPKLLFLTSPNNPDGSIIS----DDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVL  235 (380)
T ss_pred             CHHHHHHHHhc--cCCcEEEEeCCCCCCCCCCC----HHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEE
Confidence            68899888843  46889998899999998876    55555555543 99999999997744332211 1111112233


Q ss_pred             EEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHh
Q 021893          125 VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQ  202 (306)
Q Consensus       125 ~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~  202 (306)
                      -||||.++ +|+ |+||+++++++++.+.....  .++.+.+++.++.++++... -++..+.+++.++++.+.|+.+. 
T Consensus       236 ~SfSK~~glaGl-RiGy~~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~-  311 (380)
T PLN03026        236 RTFSKRAGLAGL-RVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVP-  311 (380)
T ss_pred             ecchHhhcCccc-cceeeecCHHHHHHHHHhcC--CCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCC-
Confidence            49999999 999 99999999999888765332  45667788888887774311 02234555566666666665541 


Q ss_pred             hCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          203 QFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       203 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                          .....+..+.++++.++.   ..++.++++.|.++||.+.++    .++++|+++.   +.++++.+++.|+++
T Consensus       312 ----~~~~~p~~~~f~~~~~~~---~~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~---~~~~~~~l~~al~~~  379 (380)
T PLN03026        312 ----FLEPYPSDANFILCRVTS---GRDAKKLKEDLAKMGVMVRHYNSKELKGYIRVSVG---KPEHTDALMEALKQL  379 (380)
T ss_pred             ----CCeECCCCCeEEEEECCC---CCCHHHHHHHHHHCCeEEEECCCCCCCCEEEEecC---CHHHHHHHHHHHHHh
Confidence                222245667888887763   245678999999999999875    3579999943   677888888888654

>PRK03321 putative aminotransferase; Provisional

Probab=99.85  E-value=1.5e-20  Score=169.04  Aligned_cols=207  Identities=20%  Similarity=0.253  Sum_probs=144.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHH--cCCEEEEehhhhccccccccc-ccccCCCCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK--YNILMIADEIQSGLARSGRML-ASDWEEVRP  122 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~--~gi~li~De~~~g~~~~g~~~-~~~~~~~~~  122 (306)
                      |++.+++.++   ++++++++++++|++|.+.+    .+++.++|++  +++++|+||+|.++.+.+... ........+
T Consensus       134 ~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~----~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~  206 (352)
T PRK03321        134 DLDAMAAAIT---DRTRLIFVCNPNNPTGTVVT----PAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHP  206 (352)
T ss_pred             CHHHHHHhhc---cCCCEEEEeCCCCCcCCCcC----HHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCC
Confidence            6889988886   46788888888999998876    5566666655  699999999999765443211 111111122


Q ss_pred             c---EEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHH---HHHHHHH
Q 021893          123 D---MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAH---LGEELRQ  195 (306)
Q Consensus       123 d---~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~---~~~~l~~  195 (306)
                      +   +.|+||.++ +|+ |+||+++++++++.+...  ...++.+.+++.++.++++..  +.+.++.++   ..+.+.+
T Consensus       207 ~vi~~~S~SK~~g~~Gl-RiG~~v~~~~~~~~~~~~--~~~~~~s~~~q~~a~~~l~~~--~~~~~~~~~~~~~r~~~~~  281 (352)
T PRK03321        207 NVVVLRTFSKAYGLAGL-RVGYAVGHPEVIAALRKV--AVPFSVNSLAQAAAIASLAAE--DELLERVDAVVAERDRVRA  281 (352)
T ss_pred             CEEEEecchHHhhhHHH-hhhhhcCCHHHHHHHHHh--cCCCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHH
Confidence            3   338999998 899 999999999999988753  345667888888887777532  222222322   2333444


Q ss_pred             HHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          196 HLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       196 ~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      .|+..     ++. ..+..|.++|+.+..     ...++++.|.++||.+.+.+.+.+|+++   .+.+++++++++|++
T Consensus       282 ~L~~~-----~~~-~~~~~g~~i~i~l~~-----~~~~~~~~l~~~gI~v~~~~~~~iRi~~---~~~~~~~~~~~al~~  347 (352)
T PRK03321        282 ALRAA-----GWT-VPPSQANFVWLPLGE-----RTADFAAAAAEAGVVVRPFAGEGVRVTI---GAPEENDAFLRAARA  347 (352)
T ss_pred             HHHHC-----CCc-cCCCCCCEEEEeCCC-----CHHHHHHHHHHCCEEEEccCCCcEEEee---CCHHHHHHHHHHHHH
Confidence            44432     122 223457888887642     4678999999999999987677899983   588999999999998


Q ss_pred             HHh
Q 021893          276 VLE  278 (306)
Q Consensus       276 ~l~  278 (306)
                      +++
T Consensus       348 ~~~  350 (352)
T PRK03321        348 WRA  350 (352)
T ss_pred             Hhc
Confidence            876

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=99.85  E-value=3.7e-20  Score=166.73  Aligned_cols=250  Identities=16%  Similarity=0.165  Sum_probs=160.2

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v   64 (306)
                      ..|++..|+.++-...+.++..+....-...|.|+.           +..++.       .|++.+++..    ++++++
T Consensus        83 ~~I~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~----~~~k~i  158 (357)
T PRK14809         83 EQVWLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY----DGERIV  158 (357)
T ss_pred             ceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh----cCCcEE
Confidence            357778888777665555554433322222333221           122222       1344444433    246788


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCCcEEEeccccc-CCcccceeeE
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDMVILGKALG-GGVIPVSAVL  142 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~d~~s~sK~~~-~G~~~~g~~~  142 (306)
                      ++++++|++|.. .+.+.+++|.++|++ ++++|+||+|.+|...+.... .+..+....+.||||.++ +|+ |+||++
T Consensus       159 ~l~~p~NPTG~~-~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~Gl-RiG~~~  235 (357)
T PRK14809        159 YLTSPHNPTGSE-IPLDEVEALAERTDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGL-RLGYAV  235 (357)
T ss_pred             EEeCCCCCCCcC-CCHHHHHHHHHhCcc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcch-hheeee
Confidence            888899999965 578888888888865 789999999998754333221 111222334559999998 999 999999


Q ss_pred             eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE
Q 021893          143 ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF  222 (306)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~  222 (306)
                      +++++++.+....  ..+..+.+++.++..+++.   +++.++.++..+..++.+.+.....     ..+..|+++|+.+
T Consensus       236 ~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~l~~---~~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~g~f~~~~~  305 (357)
T PRK14809        236 VPEEWADAYARVN--TPFAASELACRAGLAALDD---DEHVERTVETARWAREYIREELDAP-----TWESAGNFVLAEV  305 (357)
T ss_pred             cCHHHHHHHHHhC--CCCCCCHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHhcCc-----cCCCCCCEEEEEC
Confidence            9999998887532  3566677887777776642   2233333333333333333322211     2246788888876


Q ss_pred             ecCCChhhHHHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          223 DKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       223 ~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +      +..++++.|.++||.+.++.    ++++|++.  . +.+++++++++|+++++
T Consensus       306 ~------~~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~--~-~~~~~~~~l~~L~~~l~  356 (357)
T PRK14809        306 G------DASAVAEAAQERGVIVRDCTSFGLPECIRITC--G-TREETERAVEVLNEVLA  356 (357)
T ss_pred             C------CHHHHHHHHHHCCEEEEECccCCCCCeEEEec--C-CHHHHHHHHHHHHHHhc
Confidence            4      35678899999999999863    57999984  3 57899999999998875

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=99.85  E-value=9.9e-20  Score=167.26  Aligned_cols=223  Identities=16%  Similarity=0.157  Sum_probs=150.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cccc--CCCCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDW--EEVRP  122 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~--~~~~~  122 (306)
                      |++.|+  +.   ++++++++++++|+||.+ .+.+.+++|.++|++|++++|+||+|..+. ....+ ....  .+...
T Consensus       170 d~~~l~--~~---~~~~~i~l~~P~NPTG~~-~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~-~~~~~~~~~~~~~~~vI  242 (416)
T PRK09440        170 DFEHLH--ID---EDTGAICVSRPTNPTGNV-LTDEELEKLDALARQHNIPLLIDNAYGPPF-PGIIFSEATPLWNPNII  242 (416)
T ss_pred             CHHHcc--cC---CCceEEEEecCCCCCCcc-CCHHHHHHHHHHHHHcCCcEEEeCCccccC-CCcchhhcCccccCCeE
Confidence            566766  22   467888888889999965 589999999999999999999999997431 11111 0100  12223


Q ss_pred             cEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhc-----cHHHHHHHHHHHHHHHH
Q 021893          123 DMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE-----KLAERSAHLGEELRQHL  197 (306)
Q Consensus       123 d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~-----~~~~~~~~~~~~l~~~L  197 (306)
                      .+.||||...+|+ |+||+++++++++.+.........+.+.+.+.++..+++.-.-.     .+.+.++++.+.+++.|
T Consensus       243 ~~~SfSK~~~pGl-RiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L  321 (416)
T PRK09440        243 LCMSLSKLGLPGV-RCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALL  321 (416)
T ss_pred             EEecccccCCCcc-eEEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3459999745899 99999999999888765444444556778888877776532110     12333444445555555


Q ss_pred             HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----C--------CCEEEEeCCCCCCHH
Q 021893          198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-----H--------DTIVRLTPPLSISSN  264 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~--------~~~lRi~~~~~~t~~  264 (306)
                      ++..... +.....+..|.++|+.++..  ..+..++++.|.++||.+.|+     +        .+++|++..  .+.+
T Consensus       322 ~~~l~~~-~~~~~~p~gg~fiw~~~~~~--~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~--~~~~  396 (416)
T PRK09440        322 RRYLPDE-PCLIHKPEGAIFLWLWFKDL--PITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYV--QDDE  396 (416)
T ss_pred             HHhcccC-CeEEecCCCceEEEEECCCC--CCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEec--CCHH
Confidence            5442221 12223345688899988741  135678899999999999984     1        248999953  4789


Q ss_pred             HHHHHHHHHHHHHhhhcC
Q 021893          265 ELQEGSKALHDVLELDLP  282 (306)
Q Consensus       265 ~i~~~~~~l~~~l~~~~~  282 (306)
                      ++++++++|+++++ ...
T Consensus       397 ~l~~~i~~l~~~~~-~~~  413 (416)
T PRK09440        397 EIEKGIAILAEEVE-KAY  413 (416)
T ss_pred             HHHHHHHHHHHHHH-HHh
Confidence            99999999999988 543

>PLN02231 alanine transaminase

Probab=99.85  E-value=5.2e-20  Score=172.53  Aligned_cols=270  Identities=11%  Similarity=0.111  Sum_probs=171.4

Q ss_pred             ceEEEEecCCCCcccchhcccC-CccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcC---Cc
Q 021893            3 AIIVSCCGCFHGRTLAAISMSC-DNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESG---DQ   60 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~-~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~---~~   60 (306)
                      ..|++..|+.+|-......+.. +.+..-...|.|+.           ++.++.       .|+++|++.+++..   .+
T Consensus       192 e~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~  271 (534)
T PLN02231        192 NDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGIT  271 (534)
T ss_pred             ccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCC
Confidence            4677888888776666655542 22222223344443           122221       27899999997532   25


Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccc-cccc-cccc----CCC---C---CcEEEec
Q 021893           61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS-GRML-ASDW----EEV---R---PDMVILG  128 (306)
Q Consensus        61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~-g~~~-~~~~----~~~---~---~d~~s~s  128 (306)
                      ++++++..++|+||. +.+++.+++|.++|++||++||+||+|.++.+. +..+ ++..    .+.   .   ..+-|+|
T Consensus       272 ~k~ivl~nP~NPTG~-vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~S  350 (534)
T PLN02231        272 VRALVVINPGNPTGQ-VLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVS  350 (534)
T ss_pred             eEEEEEeCCCCCCCc-CCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccC
Confidence            788777777999995 568999999999999999999999999987553 3222 1111    111   1   1233889


Q ss_pred             ccc-c-CCcccceeeEe---CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHH-------Hh-----hccHHHHHHHHHH
Q 021893          129 KAL-G-GGVIPVSAVLA---DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV-------IR-----DEKLAERSAHLGE  191 (306)
Q Consensus       129 K~~-~-~G~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~-------~~-----~~~~~~~~~~~~~  191 (306)
                      |.+ + +|+ |+||+.+   ++++++.+..... ...+.+..++.++...++.       +.     .+++.+.++++.+
T Consensus       351 K~~~g~pGl-RiGy~~~~~~~~~l~~~l~k~~~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~  428 (534)
T PLN02231        351 KGYYGECGK-RGGYMEVTGFTSDVREQIYKVAS-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAK  428 (534)
T ss_pred             cccccCCcc-ceEEEEEecCCHHHHHHHHHHHh-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence            987 4 799 9999976   6788887754332 2345566777766665531       11     1123456666666


Q ss_pred             HHHHHHHHHHhhCCCceeeEEEeeeEEEEEE--ecCCC-------hhhHHHHHHHHH-HCCceeccCC-------CCEEE
Q 021893          192 ELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF--DKTAL-------PVSAYDICLKMK-ERGILAKPTH-------DTIVR  254 (306)
Q Consensus       192 ~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~--~~~~~-------~~~~~~~~~~l~-~~Gi~~~~~~-------~~~lR  254 (306)
                      .+.+.|+++    +++....+..|+++|..+  +....       ......++..|+ +.||.+.|+.       ..++|
T Consensus       429 ~l~~~L~~~----~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~R  504 (534)
T PLN02231        429 TLEDALNSL----EGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFR  504 (534)
T ss_pred             HHHHHHhcC----CCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEE
Confidence            666666654    223344456677777443  32100       001234667676 4599999862       34699


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          255 LTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       255 i~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      ++  +..+++++++++++|.++++ ++-
T Consensus       505 it--~~~~~e~l~eal~RL~~~~~-~~~  529 (534)
T PLN02231        505 CT--ILPQEDKIPAIVSRLTEFHK-SFM  529 (534)
T ss_pred             EE--eCCCHHHHHHHHHHHHHHHH-HHH
Confidence            99  56789999999999999988 653

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=99.84  E-value=1.1e-19  Score=161.92  Aligned_cols=211  Identities=21%  Similarity=0.256  Sum_probs=155.1

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|++.+.+.+.   +++++|+++.++|+||... +.+.++++.+.+.+ +.+||+||+|.+|... ..  ........++
T Consensus       133 ~d~~~~~~~~~---~~~~lv~i~nPNNPTG~~~-~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~~-~~--~~l~~~~~nl  204 (356)
T COG0079         133 LDLDAILAAIR---DKTKLVFLCNPNNPTGTLL-PREELRALLEALPE-GGLVVIDEAYIEFSPE-SS--LELLKYPPNL  204 (356)
T ss_pred             cCHHHHHHhhh---cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCC-CcEEEEeCchhhcCCc-hh--hhhccCCCCE
Confidence            36777777777   4789999999999999765 67778888888888 9999999999988541 11  1111112223


Q ss_pred             E---Eeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHH
Q 021893          125 V---ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFK  199 (306)
Q Consensus       125 ~---s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~  199 (306)
                      +   ||||.|| +|+ |+||+++++++++.+..  ....|..+.+++.++.++++.-.. ++..+++.+.++++.+.|+.
T Consensus       205 ivlRTfSKa~gLAGl-RlGy~ia~~~~i~~l~~--vr~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~  281 (356)
T COG0079         205 IVLRTFSKAFGLAGL-RVGYAIANPELIAALNK--VRPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKA  281 (356)
T ss_pred             EEEEecHHhhhcchh-ceeeccCCHHHHHHHHH--hcCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3   9999999 999 99999999999998876  445777889999999888865421 23445555555566665555


Q ss_pred             HHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----CCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893          200 IQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----DTIVRLTPPLSISSNELQEGSKALH  274 (306)
Q Consensus       200 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----~~~lRi~~~~~~t~~~i~~~~~~l~  274 (306)
                      +.     .....++.++++.+.++.   .. ...+.+.|.++||+++.+.     ++++|++   .-++++.+.++++|+
T Consensus       282 ~~-----~~~v~pS~aNFvlv~~~~---~~-~~~l~~~L~~~giivR~~~~~~~~~~~lRit---vgt~een~~ll~AL~  349 (356)
T COG0079         282 LG-----LFGVFPSQANFVLVRVPD---AE-AAALAEALLKKGILVRDCSSVGLLPGYLRIT---VGTPEENDRLLAALR  349 (356)
T ss_pred             CC-----CCeecCCCCcEEEEECCC---cc-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEE---eCCHHHHHHHHHHHH
Confidence            53     111344558888887764   23 6689999999999999763     4699998   346777799999999


Q ss_pred             HHHh
Q 021893          275 DVLE  278 (306)
Q Consensus       275 ~~l~  278 (306)
                      +++.
T Consensus       350 ~~~~  353 (356)
T COG0079         350 EVLK  353 (356)
T ss_pred             HHHh
Confidence            8876

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=99.84  E-value=8.7e-20  Score=164.00  Aligned_cols=251  Identities=15%  Similarity=0.120  Sum_probs=160.0

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCC-------CHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFG-------DITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~-------d~~~le~~i~~~~~~~~~v   64 (306)
                      ..|++..|+.++-...+..+.. . ..-...|.|+.           ++.++.+       | +++++.+.   ++++++
T Consensus        72 ~~i~it~Ga~~~l~~~~~~~~~-~-~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~---~~~~~v  145 (354)
T PRK06358         72 ENVILGNGATELIFNIVKVTKP-K-KVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIK---EEIDLV  145 (354)
T ss_pred             hhEEECCCHHHHHHHHHHHhCC-C-cEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhc---cCCCEE
Confidence            3577777777776555544422 1 11122233322           2233321       3 34444443   357777


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc----cccCCCCCcEEEeccccc-CCcccce
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA----SDWEEVRPDMVILGKALG-GGVIPVS  139 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~----~~~~~~~~d~~s~sK~~~-~G~~~~g  139 (306)
                      +++.++|++|.. .+.+.+++|.++|++|++++|+||+|.+|...+...+    .+.......+.||||.++ +|+ |+|
T Consensus       146 ~~~~P~NPtG~~-~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~-RiG  223 (354)
T PRK06358        146 FLCNPNNPTGQL-ISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGL-RLG  223 (354)
T ss_pred             EEeCCCCCCCCc-cCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcch-hhe
Confidence            666668999864 6899999999999999999999999998754442211    111112223459999999 999 999


Q ss_pred             eeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893          140 AVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF  217 (306)
Q Consensus       140 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~  217 (306)
                      |++++ +.+++.+.....  .++.+.+++.++..+++.-.- ++..+.++++++.+.+.|++.    ++. ...+..|.+
T Consensus       224 ~lv~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~-~~~~~~g~f  296 (354)
T PRK06358        224 YGLTSNKNLAEKLLQMRE--PWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEF----KGI-KVYKPSVNF  296 (354)
T ss_pred             eeecCCHHHHHHHHHhCC--CCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcC----CCc-EEcCCcceE
Confidence            99874 677777654322  456677777777777742110 223344455555555555442    222 222345668


Q ss_pred             EEEEEecCCChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          218 NAVEFDKTALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       218 ~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      +|+.+++      ..++++.|.++||.+.++      +++++|++   ..+.++.+++++.|++.+
T Consensus       297 ~~~~~~~------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls---~~~~~~~~~l~~~l~~~~  353 (354)
T PRK06358        297 IFFKLEK------PIDLRKELLKKGILIRSCSNYRGLDENYYRVA---VKSREDNKKLLKALEVIL  353 (354)
T ss_pred             EEEEcCc------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEE---eCCHHHHHHHHHHHHHHh
Confidence            8887763      368999999999999985      24689998   457888999999998765

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=99.84  E-value=3.2e-20  Score=166.46  Aligned_cols=209  Identities=21%  Similarity=0.214  Sum_probs=144.3

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccCCCCCc
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEEVRPD  123 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~~~~~d  123 (306)
                      .|++.+++.+.   +++++|+++.++|++|...+ .+.++++++.|+ +++++|+||+|.++...+..... ...+....
T Consensus       130 ~d~~~l~~~~~---~~~~~v~l~~p~NptG~~~~-~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~  204 (346)
T TIGR01141       130 LDLEDILVAID---DKPKLVFLCSPNNPTGNLLS-RSDIEAVLERTP-EDALVVVDEAYGEFSGEPSTLPLLAEYPNLIV  204 (346)
T ss_pred             CCHHHHHHhcC---CCCCEEEEeCCCCCCCCCCC-HHHHHHHHHhCC-CCcEEEEECchhhhcCCccHHHHHhhCCCEEE
Confidence            47889988765   57888998889999997765 444455554444 59999999999976433222111 11111112


Q ss_pred             EEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHH
Q 021893          124 MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQ  201 (306)
Q Consensus       124 ~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~  201 (306)
                      +.|+||.++ +|+ |+||+++++++++.++...  ..+..+++++.++.++++... ..+..++++++.+.+++.|++. 
T Consensus       205 ~~S~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-  280 (346)
T TIGR01141       205 LRTLSKAFGLAGL-RIGYAIANAEIIDALNKVR--APFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKL-  280 (346)
T ss_pred             EehhhHhhhchhh-hceeeecCHHHHHHHHhcc--CCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence            338899996 799 9999999999988887532  245567778777777665542 1334566666666676666654 


Q ss_pred             hhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----CCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893          202 QQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----DTIVRLTPPLSISSNELQEGSKALH  274 (306)
Q Consensus       202 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----~~~lRi~~~~~~t~~~i~~~~~~l~  274 (306)
                         ++.. ..+..|.++|+.++.     ++.++++.|.++||.+.++.     .+++|++++   ++++++++++.|+
T Consensus       281 ---~g~~-~~~~~g~~~~~~~~~-----~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l~  346 (346)
T TIGR01141       281 ---PGLE-VYPSDANFVLIRFPR-----DADALFEALLEKGIIVRDLNSYPGLPNCLRITVG---TREENDRFLAALR  346 (346)
T ss_pred             ---CCCE-ECCCcCCEEEEecCC-----CHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHhC
Confidence               1122 233467788887762     56789999999999999863     589999953   7899999988763

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=99.84  E-value=1.3e-19  Score=163.52  Aligned_cols=213  Identities=15%  Similarity=0.150  Sum_probs=145.6

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~d~  124 (306)
                      |++++++.+..  ++++++++++++|++|.+. +.+.++++.+.|+ +++++|+||+|.+|........ .+.......+
T Consensus       140 d~~~l~~~~~~--~~~~lv~l~~p~NPTG~~~-~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~  215 (364)
T PRK04781        140 DVPAIVAAALA--SNAKLVFLCSPSNPAGSAI-ALDQIERALQALQ-GKALVVVDEAYGEFSDVPSAVGLLARYDNLAVL  215 (364)
T ss_pred             CHHHHHHHHhc--cCCeEEEEcCCCCCCCCCc-CHHHHHHHHHhCC-CCcEEEEeCcchhhcCCcchHHHHhhCCCEEEE
Confidence            46666554432  4688888888999999765 6777788877775 4899999999998743222111 1222222334


Q ss_pred             EEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHH
Q 021893          125 VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKI  200 (306)
Q Consensus       125 ~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~  200 (306)
                      -||||.++ +|+ |+||+++++++++.+....  ..+..+.+++.++..+++....   .+..+.+++.++.+.+.|+.+
T Consensus       216 ~SfSK~~gl~Gl-RvGy~v~~~~l~~~l~~~~--~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~  292 (364)
T PRK04781        216 RTLSKAHALAAA-RIGSLIANAELIAVLRRCQ--APYPVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQL  292 (364)
T ss_pred             ecChhhcccccc-eeeeeeCCHHHHHHHHhcc--CCCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            49999999 999 9999999999998887643  3456677777777766653210   112334455555555556543


Q ss_pred             HhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          201 QQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----DTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       201 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                          ++.....+..|+++|+.++      +..++.+.|.++||.+.++.     ++++|++.   .+.++.+.+++.|++
T Consensus       293 ----~~~~~~~p~~g~f~~~~~~------~~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~---~~~~~~~~l~~al~~  359 (364)
T PRK04781        293 ----PGVRRVYPSQGNFLLVRFD------DAEAAFQALLAAGVVVRDQRAAPRLSDALRITL---GTPEQNDRVLAALQR  359 (364)
T ss_pred             ----CCCCeECCCCCcEEEEEcC------CHHHHHHHHHHCCeEEeeCCCCCCCCCeEEEeC---CCHHHHHHHHHHHHH
Confidence                2222234567899998775      24678899999999998752     57999984   367889999999887


Q ss_pred             HHh
Q 021893          276 VLE  278 (306)
Q Consensus       276 ~l~  278 (306)
                      +..
T Consensus       360 ~~~  362 (364)
T PRK04781        360 TQA  362 (364)
T ss_pred             HHh
Confidence            654

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=99.84  E-value=2.5e-19  Score=164.04  Aligned_cols=211  Identities=16%  Similarity=0.166  Sum_probs=151.0

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |+++|+++++   +++++|++++++|++|.+.+    +++|.++|+++|+++++|++|+ ++..  .+....  ..+|++
T Consensus       153 d~~~l~~~i~---~~t~lv~l~~~~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~--~~~~~~--~~~D~~  220 (406)
T PRK09295        153 QLETLPALFD---ERTRLLAITHVSNVLGTENP----LAEMIALAHQHGAKVLVDGAQA-VMHH--PVDVQA--LDCDFY  220 (406)
T ss_pred             CHHHHHHhcC---CCcEEEEEecchhcccccCC----HHHHHHHHHHcCCEEEEEcccc-cCcc--ccCchh--cCCCEE
Confidence            7899998887   57899999999999999998    9999999999999999999997 2211  222233  345655


Q ss_pred             --EecccccCCcccceeeEeCHHHHhhcCCCCcc----------------------CCCCCCHHHHHHHHHHHHHHhh--
Q 021893          126 --ILGKALGGGVIPVSAVLADKEVMLCIQPGEHG----------------------STFGGNPLASAVAIASLDVIRD--  179 (306)
Q Consensus       126 --s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~aa~~al~~~~~--  179 (306)
                        +++|.+| .. ++|++++++++++.+.+...+                      ...+.+..+..++.++++.+.+  
T Consensus       221 ~~s~~K~~g-p~-G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g  298 (406)
T PRK09295        221 VFSGHKLYG-PT-GIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALG  298 (406)
T ss_pred             EeehhhccC-CC-CcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhC
Confidence              5569554 44 679999999887766432110                      1114567788888899988876  


Q ss_pred             -ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--------
Q 021893          180 -EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--------  249 (306)
Q Consensus       180 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--------  249 (306)
                       +.+.++.+++.+++++.|.++.    +..... .....++.+.++.    ....++.+.|.++||.++.+.        
T Consensus       299 ~~~i~~~~~~l~~~l~~~l~~~~----~~~~~~~~~~~~iv~~~~~~----~~~~~~~~~L~~~gI~v~~g~~c~~~~~~  370 (406)
T PRK09295        299 LNNIAEYEQNLMHYALSQLESVP----DLTLYGPQNRLGVIAFNLGK----HHAYDVGSFLDNYGIAVRTGHHCAMPLMA  370 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCC----CEEEeCCCCCceEEEEEECC----cCHHHHHHHHHhCCeEEeccccchHHHHH
Confidence             3355677777777777776542    121111 1224456665552    356678888989999987531        


Q ss_pred             ----CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          250 ----DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       250 ----~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                          ++.+|++++.++|++||+.+++.|+++..
T Consensus       371 ~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~  403 (406)
T PRK09295        371 YYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR  403 (406)
T ss_pred             HHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence                46899999999999999999999988754

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.84  E-value=2.9e-19  Score=163.20  Aligned_cols=244  Identities=18%  Similarity=0.153  Sum_probs=159.8

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccC
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIP   78 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~   78 (306)
                      ..|++..++|+.+..+....+...   +     ..+..+++     .|++++++.+.   +++++|++++++ ++|.+. 
T Consensus       109 d~Vl~~~~~h~~~~~~~~~~~~~~---g-----~~~~~v~~~~~~~~d~~~l~~~i~---~~t~~viv~~~~-~~G~~~-  175 (398)
T cd00613         109 NKVLVPDSAHPTNPAVARTRGEPL---G-----IEVVEVPSDEGGTVDLEALKEEVS---EEVAALMVQYPN-TLGVFE-  175 (398)
T ss_pred             CEEEEcCccCcchHHHHHHhcccC---C-----cEEEEeccCCCCCcCHHHHHHhcC---CCeEEEEEECCC-CCceec-
Confidence            455677889998877766554211   0     01112222     37899998886   579999999875 677663 


Q ss_pred             ChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--Eeccccc----CCcccceeeEeCHHHHhhcC
Q 021893           79 PDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALG----GGVIPVSAVLADKEVMLCIQ  152 (306)
Q Consensus        79 ~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~----~G~~~~g~~~~~~~~~~~~~  152 (306)
                        ++|++|.++|++||+++|+|++|+...  + ......+  .+|++  +++|.+.    ||+ ++|+++.++++++.+.
T Consensus       176 --~~l~~i~~la~~~g~~livD~~~~~~~--~-~~~~~~~--~~d~~~~s~~K~~~p~g~Ggp-~~g~l~~~~~~~~~~~  247 (398)
T cd00613         176 --DLIKEIADIAHSAGALVYVDGDNLNLT--G-LKPPGEY--GADIVVGNLQKTGVPHGGGGP-GAGFFAVKKELVRFLP  247 (398)
T ss_pred             --chHHHHHHHHHhcCCEEEEEecccccc--C-CCChHHc--CCCEEEeeccccCCCCCCCCC-ceeEEEEhhhhHhhCC
Confidence              457999999999999999999986321  1 1111223  35554  6778873    477 9999999988887653


Q ss_pred             CC-----------------------------CccCCCCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHH
Q 021893          153 PG-----------------------------EHGSTFGGNPLASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKI  200 (306)
Q Consensus       153 ~~-----------------------------~~~~~~~~~~~~~~aa~~al~~~~~~---~~~~~~~~~~~~l~~~L~~~  200 (306)
                      +.                             ....++..++....++..+++.+.++   ++.++.++++++++++|+++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~  327 (398)
T cd00613         248 GRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEV  327 (398)
T ss_pred             CCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            21                             00112334455666666666665443   35678888999999988886


Q ss_pred             HhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC---CCCEEEEeCCCCCCHHHHHHHHHHH
Q 021893          201 QQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT---HDTIVRLTPPLSISSNELQEGSKAL  273 (306)
Q Consensus       201 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---~~~~lRi~~~~~~t~~~i~~~~~~l  273 (306)
                      ....    .........+++.++.. .+.++.++++.|.++|+.+...   ..+.+|++|+.++|++||+++++.|
T Consensus       328 ~~~~----~~~~~~~~~v~~~~~~~-~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~~~t~edid~~~~~L  398 (398)
T cd00613         328 GGVL----PFNGPFFHEFVLRLPPL-YGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTETETKEELDALLEAL  398 (398)
T ss_pred             CCcc----cCCCCeeEEEEEEcCCc-chHHHHHHHHhhhhcCccccccccCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence            4221    00011122234444421 0235778999999999988653   5689999999999999999998864

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=99.84  E-value=6.3e-20  Score=169.90  Aligned_cols=268  Identities=12%  Similarity=0.174  Sum_probs=159.5

Q ss_pred             eEEEEecCCCCcccchhc-----ccCCccccccCCCCCCC-----------c--cccc-----------C-CCHHHHHHH
Q 021893            4 IIVSCCGCFHGRTLAAIS-----MSCDNEAIRGFGPLLPG-----------H--LKVD-----------F-GDITALEKI   53 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~-----~~~~~~~~~~~~~~~~~-----------~--~~~~-----------~-~d~~~le~~   53 (306)
                      .|++.+|+.+|-..++.+     +..+.+......|.++.           .  +.++           + .|+++++++
T Consensus       157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~  236 (521)
T TIGR03801       157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKL  236 (521)
T ss_pred             eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHh
Confidence            688999999887665544     34433333333344322           1  1111           1 256788876


Q ss_pred             HHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc--CCEEEEehhhhcccccccccccccC-CCCCcEEEeccc
Q 021893           54 FKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--NILMIADEIQSGLARSGRMLASDWE-EVRPDMVILGKA  130 (306)
Q Consensus        54 i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~--gi~li~De~~~g~~~~g~~~~~~~~-~~~~d~~s~sK~  130 (306)
                      ++   +++++++++.++|++|.+ .+++.+++|.++|++|  ++++|+||+|..|......+ .... .....+.||||.
T Consensus       237 ~~---~~~kai~l~nP~NPTG~v-ls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl-~~~~~~~vI~v~SfSK~  311 (521)
T TIGR03801       237 RD---PSIKALFVVNPSNPPSVA-MSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSL-FAELPYNTIGVYSFSKY  311 (521)
T ss_pred             cC---CCCcEEEEeCCCCCCCCC-CCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccch-hhhCCCCEEEEEcchhh
Confidence            65   578888888888999954 5899999999999987  99999999999764311111 1111 112234499999


Q ss_pred             cc-CCcccceeeEeCHH-----HHh--------hcC------------------------CCCccCCCCCCHHHHH--HH
Q 021893          131 LG-GGVIPVSAVLADKE-----VML--------CIQ------------------------PGEHGSTFGGNPLASA--VA  170 (306)
Q Consensus       131 ~~-~G~~~~g~~~~~~~-----~~~--------~~~------------------------~~~~~~~~~~~~~~~~--aa  170 (306)
                      ++ +|| |+||++++++     ++.        .+.                        .....++.+.+.+.+.  ++
T Consensus       312 fg~~G~-RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al  390 (521)
T TIGR03801       312 FGATGW-RLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMAL  390 (521)
T ss_pred             ccCchh-hhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHH
Confidence            98 999 9999999754     221        121                        1112233333444443  21


Q ss_pred             HHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCC-CceeeEEEeeeEEEEEEecCCC-------------hhhHHHHH
Q 021893          171 IASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFP-NYVKEVRGRGLFNAVEFDKTAL-------------PVSAYDIC  235 (306)
Q Consensus       171 ~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~g~~~~i~~~~~~~-------------~~~~~~~~  235 (306)
                      -++...+.. +.+.+   +..+.++++...+...++ ......+..+.++++++.....             ..+..+|+
T Consensus       391 ~a~~all~~~~~y~~---~~~~~~~~R~~~l~~~Lg~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~  467 (521)
T TIGR03801       391 FSLFALMDKENAYKA---ETKDICRRREKLLFRGLGLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVL  467 (521)
T ss_pred             HHHHHHhccchhHHH---HHHHHHHHHHHHHHHhcCCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHH
Confidence            122222222 22222   222333333333222221 1112345677888888874210             01356788


Q ss_pred             HHHHHC-CceeccC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          236 LKMKER-GILAKPT-----HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       236 ~~l~~~-Gi~~~~~-----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      .+|.++ ||.+.|+     ..+++|+++ ...+++++.++.++|+++++ ++.
T Consensus       468 ~~L~~e~gV~v~PG~~Fg~~~~~vRisl-a~l~~~~~~~~~~rl~~~~~-~~~  518 (521)
T TIGR03801       468 FRLAEETGIVLLPGGGFGGPEWSVRVSL-ANLNEYDYAEIGRAIRKILD-EYY  518 (521)
T ss_pred             HHHHHhCCEEEeCchhcCCCCCeEEEEe-cCCCHHHHHHHHHHHHHHHH-HHH
Confidence            888755 9999986     246899994 23688999999999999998 764

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.84  E-value=2.3e-19  Score=160.96  Aligned_cols=222  Identities=23%  Similarity=0.278  Sum_probs=154.6

Q ss_pred             ccccCCCHHHHHHHHHhcC--CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cc-ccccccc-c
Q 021893           40 LKVDFGDITALEKIFKESG--DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GL-ARSGRML-A  114 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~--~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~-~~~g~~~-~  114 (306)
                      ..++..|++.+++++++..  +++++++++++++++|...+    +++|.++|+++|+++|+|++|+ |. +..+... .
T Consensus       110 ~~~~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~  185 (349)
T cd06454         110 RIFKHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP----LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEE  185 (349)
T ss_pred             EEecCCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC----HHHHHHHHHHcCCEEEEEccccccccCCCCCChhh
Confidence            3455668899999998642  56789999999999998877    9999999999999999999997 32 2222211 0


Q ss_pred             cccCCCCCcE--EEecccccCCcccceeeEeCHHHHhhcCCCCcc--CCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHH
Q 021893          115 SDWEEVRPDM--VILGKALGGGVIPVSAVLADKEVMLCIQPGEHG--STFGGNPLASAVAIASLDVIRD-EKLAERSAHL  189 (306)
Q Consensus       115 ~~~~~~~~d~--~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~  189 (306)
                      ........|+  .|++|.+++   +.|+++.++++++.+......  .+.+.++..++++.++++.+.. +...++++++
T Consensus       186 ~~~~~~~~~i~~~s~sK~~~~---~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  262 (349)
T cd06454         186 FGGLTDDVDIIMGTLGKAFGA---VGGYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQEN  262 (349)
T ss_pred             hccccccCcEEEeechhhhcc---cCCEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            1111223344  488999973   336688888888776543221  2224567777788888887755 4567788888


Q ss_pred             HHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------CCCEEEEeCCCCCC
Q 021893          190 GEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLSIS  262 (306)
Q Consensus       190 ~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~~lRi~~~~~~t  262 (306)
                      .+.+.+.|++....     ......+.+.++.+++   .....++.+.|.++||.+.+.       +.+++|++++..++
T Consensus       263 ~~~l~~~l~~~g~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~  334 (349)
T cd06454         263 VRYLRRGLKELGFP-----VGGSPSHIIPPLIGDD---PAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHT  334 (349)
T ss_pred             HHHHHHHHHhcCCc-----ccCCCCCcEEEEeCCC---hHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCC
Confidence            88888888775211     1111223333333321   245678999999999998752       24689999998899


Q ss_pred             HHHHHHHHHHHHHH
Q 021893          263 SNELQEGSKALHDV  276 (306)
Q Consensus       263 ~~~i~~~~~~l~~~  276 (306)
                      ++++++++++|+++
T Consensus       335 ~~~i~~~~~~l~~~  348 (349)
T cd06454         335 KEDIDRLLEALKEV  348 (349)
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999999764

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=99.84  E-value=9.7e-20  Score=164.25  Aligned_cols=207  Identities=18%  Similarity=0.262  Sum_probs=142.1

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~d~  124 (306)
                      |++++++.++   +++++++++.++|++|.+.+    .+++.++|+++|+++|+||+|.++. .+.... ....+....+
T Consensus       147 ~~~~l~~~~~---~~~~~v~~~~p~nptG~~~~----~~~l~~l~~~~~~~li~De~y~~~~-~~~~~~~~~~~~~vi~~  218 (361)
T PRK00950        147 DVDSVLNAIT---EKTKVIFLCTPNNPTGNLIP----EEDIRKILESTDALVFVDEAYVEFA-EYDYTPLALEYDNLIIG  218 (361)
T ss_pred             CHHHHHHHhc---cCCCEEEEeCCCCCCCCCcC----HHHHHHHHHHCCcEEEEECchhhhC-ccchHHHHHhcCCEEEE
Confidence            6888888886   46778888888999999888    8889999999999999999998763 111111 1112222234


Q ss_pred             EEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhh
Q 021893          125 VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQ  203 (306)
Q Consensus       125 ~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  203 (306)
                      .||||.++ +|+ |+||+++++++++.+....  ..+..+.+++.++..+++.   .++.++..+..+..++.+.+... 
T Consensus       219 ~S~SK~~g~~Gl-RiG~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~l~~---~~~~~~~~~~~~~~r~~l~~~l~-  291 (361)
T PRK00950        219 RTFSKVFGLAGL-RIGYGFVPEWLIDYYMRAK--TPFSLTRLSQAAAIAALSD---KEYIEKSIEHGIKSREYLYNELP-  291 (361)
T ss_pred             EeehHhhcCchh-hcchhcCCHHHHHHHHHhc--CCCCCCHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHhhcC-
Confidence            59999998 899 9999999999988776532  2344567777776666642   22333333333333333322211 


Q ss_pred             CCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          204 FPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       204 ~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      +    ...+..+.++|+.+.    ..+..++++.|.++||.+.++      +++++|++++   +.++++.+++.|++++
T Consensus       292 ~----~~~~~~~~~i~~~~~----~~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~---~~~~~~~l~~~L~~il  360 (361)
T PRK00950        292 F----KVYPSEANFVLVDVT----PMTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG---TFEENERFLEILKEIV  360 (361)
T ss_pred             e----eECCCcceEEEEECC----CCCHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence            1    112345677888773    346789999999999999874      2568999943   7789999999998876


Q ss_pred             h
Q 021893          278 E  278 (306)
Q Consensus       278 ~  278 (306)
                      +
T Consensus       361 ~  361 (361)
T PRK00950        361 E  361 (361)
T ss_pred             C
Confidence            3

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=99.84  E-value=1.5e-19  Score=165.02  Aligned_cols=258  Identities=15%  Similarity=0.111  Sum_probs=162.0

Q ss_pred             EEEEecCCCCcccchhcc--cCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893            5 IVSCCGCFHGRTLAAISM--SCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         5 ii~~~~~~hg~~~~~~~~--~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v   64 (306)
                      |++..|+-+|-..++..+  ..+.+..-...|.|++           ++.+|.       .|++.+++.+++++++++++
T Consensus        97 v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~  176 (396)
T PRK09257         97 TVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVL  176 (396)
T ss_pred             EEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEE
Confidence            488888888877665333  2333333344456554           233332       27899999988654556777


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccc-cc-ccc---ccc-CCCCCcEEEeccccc-CCccc
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS-GR-MLA---SDW-EEVRPDMVILGKALG-GGVIP  137 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~-g~-~~~---~~~-~~~~~d~~s~sK~~~-~G~~~  137 (306)
                      +++.++|+||. +.+++.+++|.++|++||+++|+||+|.++... +. ..+   +.. ......+.||||.++ +|+ |
T Consensus       177 i~~~p~NPTG~-~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~Gl-R  254 (396)
T PRK09257        177 LHGCCHNPTGA-DLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGE-R  254 (396)
T ss_pred             EeCCCCCCCCC-CCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccc-c
Confidence            77889999995 568999999999999999999999999987542 11 111   111 112234559999999 599 9


Q ss_pred             ceeeEe---CHH----HHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh------h--ccHHHHHHHHHHHHHHHHHHHHh
Q 021893          138 VSAVLA---DKE----VMLCIQPGEHGSTFGGNPLASAVAIASLDVIR------D--EKLAERSAHLGEELRQHLFKIQQ  202 (306)
Q Consensus       138 ~g~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~------~--~~~~~~~~~~~~~l~~~L~~~~~  202 (306)
                      +||+++   +++    ++..++........+.+.+.+.++...++...      .  ++..++++++++.+.+.|++...
T Consensus       255 iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~  334 (396)
T PRK09257        255 VGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGP  334 (396)
T ss_pred             ceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            999873   333    33444332222333345666666555553211      0  22455556666666666665421


Q ss_pred             hCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          203 QFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       203 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      .. .+....+..|+++|+.++.       +.+.+.+.++||.+.|.+    |++.+ ..++++|++++++|++++
T Consensus       335 ~~-~~~~~~p~gg~~~w~~l~~-------~~~~~l~~~~~V~~~p~~----ri~~~-~~~~~~i~~~~~~i~~~~  396 (396)
T PRK09257        335 SR-DFDFIARQRGMFSYSGLTP-------EQVDRLREEFGVYAVGSG----RINVA-GLNESNIDYVAEAIAAVL  396 (396)
T ss_pred             CC-CcccccccceEEEecCCCH-------HHHHHHHHcCCEEEcCCC----eEEEe-eCCHHHHHHHHHHHHhhC
Confidence            10 1223456678888886641       233444456699998752    88853 378999999999998753

>PLN02397 aspartate transaminase

Probab=99.83  E-value=2.4e-19  Score=164.69  Aligned_cols=217  Identities=17%  Similarity=0.132  Sum_probs=145.8

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc--c-cc---cccCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR--M-LA---SDWEE  119 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~--~-~~---~~~~~  119 (306)
                      |++.+++.++++.+++++++++.++|+||.+ .+++.+++|.++|++||+++|+||+|.+|.+.+.  . .+   +...+
T Consensus       180 d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v-~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~  258 (423)
T PLN02397        180 DFDGLLEDLKAAPDGSFVLLHACAHNPTGVD-PTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDG  258 (423)
T ss_pred             CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcC
Confidence            7888888887654567888888899999955 5899999999999999999999999998754331  1 11   11111


Q ss_pred             -CCCcEEEeccccc-CCcccceeeE--e-CHHHHh----hcCCCCccCCCCCCHHHHHHHHHHHHHHh--------hccH
Q 021893          120 -VRPDMVILGKALG-GGVIPVSAVL--A-DKEVML----CIQPGEHGSTFGGNPLASAVAIASLDVIR--------DEKL  182 (306)
Q Consensus       120 -~~~d~~s~sK~~~-~G~~~~g~~~--~-~~~~~~----~~~~~~~~~~~~~~~~~~~aa~~al~~~~--------~~~~  182 (306)
                       ....+.||||.++ +|+ |+||++  . ++++++    .+.........+.+.+.+.++..+++.-.        -++.
T Consensus       259 ~~vI~~~SfSK~~~~~G~-RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~  337 (423)
T PLN02397        259 HEILVAQSYAKNMGLYGE-RVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGM  337 (423)
T ss_pred             CcEEEEEECcccCCCccc-cceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence             1223449999999 899 999984  3 555443    33222222233445666666665554311        1234


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccCCCCEEEEeCCCCC
Q 021893          183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPTHDTIVRLTPPLSI  261 (306)
Q Consensus       183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~~~lRi~~~~~~  261 (306)
                      .++++++++.+.+.|++++... .+....+..|.++|+.++        .++++.|+++ ||++.+.  +  |+++. ..
T Consensus       338 ~~~~~~rr~~l~~~L~~~~~~~-~~~~~~p~gg~fl~~~l~--------~~~~~~Ll~~~~V~v~~~--~--Ri~~~-~~  403 (423)
T PLN02397        338 ADRIISMRQKLYDALEARGSPG-DWSHITKQIGMFSFTGLN--------KEQVDRMTKEYHIYMTRD--G--RISMA-GL  403 (423)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCC-CCCcccCCceEEEecCCC--------HHHHHHHHHhCCEEECCC--C--eEEEe-eC
Confidence            5567777777777777763111 122234677788887653        3488888755 9999754  2  88842 37


Q ss_pred             CHHHHHHHHHHHHHHHh
Q 021893          262 SSNELQEGSKALHDVLE  278 (306)
Q Consensus       262 t~~~i~~~~~~l~~~l~  278 (306)
                      +++++++++++|+++++
T Consensus       404 ~~~~i~~~~~~i~~~~~  420 (423)
T PLN02397        404 SSKNVPYLADAIHAVVT  420 (423)
T ss_pred             CHHHHHHHHHHHHHHHh
Confidence            89999999999999875

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=99.83  E-value=8.5e-20  Score=164.31  Aligned_cols=250  Identities=17%  Similarity=0.140  Sum_probs=160.8

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-----CCHHHHHHHHHhcCCcEEEEEEc
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-----GDITALEKIFKESGDQIAGFLFE   67 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-----~d~~~le~~i~~~~~~~~~v~v~   67 (306)
                      .|++.+|+.++-......+..+....-...|.++.           ++.+|.     .|++++++.++.  .++++++++
T Consensus        83 ~I~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~--~~~~~v~l~  160 (356)
T PRK04870         83 DVLLGNGSDELIQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAE--HRPALVFLA  160 (356)
T ss_pred             cEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhc--CCCCEEEEc
Confidence            56777777666554444443332222222233322           122222     378999999874  367888888


Q ss_pred             cccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccceeeEeCHH
Q 021893           68 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLADKE  146 (306)
Q Consensus        68 ~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~  146 (306)
                      +++|++|... +.+.+++|.++|   ++++|+||+|.+|............+....+.|+|| ++ +|+ |+||++++++
T Consensus       161 ~p~NPtG~~~-~~~~~~~i~~~~---~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~Gl-RiG~~i~~~~  234 (356)
T PRK04870        161 YPNNPTGNLF-DDADVERIIEAA---PGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGL-RLGYLAGHPA  234 (356)
T ss_pred             CCCCCCCCCC-CHHHHHHHHHHC---CCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhHHH-hhhhhhCCHH
Confidence            8899999665 677778887777   789999999987643211111122222233459999 66 799 9999999999


Q ss_pred             HHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecC
Q 021893          147 VMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT  225 (306)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~  225 (306)
                      +++.+....  ..+..+.+++.++..+++.... ++..++++++++.+.+.|+.+    +++ ...+..|.++|+.++  
T Consensus       235 ~i~~~~~~~--~~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~-~~~~~~~~~~~~~~~--  305 (356)
T PRK04870        235 WIAELDKVR--PPYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAAL----PGV-TVFPSAANFILVRVP--  305 (356)
T ss_pred             HHHHHHHcc--CCCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCc-EECCCCCeEEEEECC--
Confidence            998886533  2345667777777666653211 223455556666666666543    222 223456778888765  


Q ss_pred             CChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          226 ALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       226 ~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                          +..++++.|.++||.+.++      .++++|+++.   +.++++.++++|++++
T Consensus       306 ----~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~~  356 (356)
T PRK04870        306 ----DAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG---TPEENAQFLAALKAAL  356 (356)
T ss_pred             ----CHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC---CHHHHHHHHHHHHHhC
Confidence                2467889999999999864      2579999943   6888999999988753

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=99.83  E-value=2.4e-19  Score=160.09  Aligned_cols=202  Identities=18%  Similarity=0.157  Sum_probs=141.2

Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccce
Q 021893           61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVS  139 (306)
Q Consensus        61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~g  139 (306)
                      +++++++.++|+||.. .+.+.++++.+.|++++.++|+||+|.+|.............-...+-||||.++ +|+ |+|
T Consensus       131 ~~~v~l~nPnNPTG~~-~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl~Gl-RiG  208 (339)
T PRK06959        131 LTHLIVVNPNNPTAER-LPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFGLAGV-RAG  208 (339)
T ss_pred             CCEEEEeCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhcCCcch-heE
Confidence            4455555557889865 5788899999999999999999999997743211111111111122349999999 999 999


Q ss_pred             eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893          140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN  218 (306)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~  218 (306)
                      |+++++++++.+....  ..+..+.+++.++.++++... .++..+++++.++++.+.|++.+     .  .+...++++
T Consensus       209 y~v~~~~li~~l~~~~--~~~~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-----~--~~~~~~~f~  279 (339)
T PRK06959        209 FVLAAPALLAALRDAL--GAWTVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAHG-----F--AVHATPLFS  279 (339)
T ss_pred             EEecCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-----C--CccCcceEE
Confidence            9999999998887643  345567788888887775321 13345666666777777776652     1  112346677


Q ss_pred             EEEEecCCChhhHHHHHHHHHHCCceeccC-CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          219 AVEFDKTALPVSAYDICLKMKERGILAKPT-HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       219 ~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      |+.++      +..++.+.|.++||.++.. ..+++|++  +..+.++++.+++.|+++++ -+.
T Consensus       280 ~~~~~------~~~~l~~~l~~~GI~vr~~~~~~~lRis--i~~~~~e~~~l~~al~~~~~-~~~  335 (339)
T PRK06959        280 WTDDP------RAAALHAALARRGIWTRYFAPPPSVRFG--LPADEAEWQRLEDALAECVP-TLA  335 (339)
T ss_pred             EEeCC------CHHHHHHHHHhCCeEEEECCCCCeEEEE--CCCCHHHHHHHHHHHHHHHH-HHh
Confidence            77543      3567999999999999875 35699999  43577899999999998877 543

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=99.83  E-value=1.6e-19  Score=165.00  Aligned_cols=207  Identities=14%  Similarity=0.089  Sum_probs=137.5

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-cccc-ccCC---CCCcEEEeccccc-
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLAS-DWEE---VRPDMVILGKALG-  132 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~-~~~~---~~~d~~s~sK~~~-  132 (306)
                      +++++++++.++|++|. +.+.+.+++|.++|++||+++|+||+|.+|...+. ..+. ...+   ....+.||||.++ 
T Consensus       172 ~~~~~i~l~nP~NPTG~-~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~  250 (402)
T TIGR03542       172 PKIDIIYLCSPNNPTGT-VLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGF  250 (402)
T ss_pred             CCceEEEEeCCCCCCCc-cCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCC
Confidence            46788888889999996 56899999999999999999999999998754332 1111 1111   2233459999998 


Q ss_pred             CCcccceeeEeCHHHH--------hhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHH
Q 021893          133 GGVIPVSAVLADKEVM--------LCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQ  201 (306)
Q Consensus       133 ~G~~~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~  201 (306)
                      +|+ |+||++++++++        +...........+.+.+.+.++...++.-..   .+..+.++++++.+.+.|+.. 
T Consensus       251 pGl-RiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-  328 (402)
T TIGR03542       251 TGV-RLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA-  328 (402)
T ss_pred             CCc-ceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence            999 999999998876        2211101111223566776666555532110   112344455555555555553 


Q ss_pred             hhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH-CCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893          202 QQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPT------HDTIVRLTPPLSISSNELQEGSKALH  274 (306)
Q Consensus       202 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~  274 (306)
                          +.....+..|.++|+.++.   ..++.++++.|++ +||.+.|+      +.+++|++  +..++++++.++++|+
T Consensus       329 ----~~~~~~~~~~~f~~v~l~~---~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis--~~~~~~~l~~~l~~l~  399 (402)
T TIGR03542       329 ----GFKVYGGEHAPYLWVKTPE---GISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFS--AFGKRENIVEACERIK  399 (402)
T ss_pred             ----CceecCCCceeEEEEECCC---CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEE--ecCCHHHHHHHHHHHH
Confidence                1211222357788998874   3456788998884 69999985      25799999  4558899999999998


Q ss_pred             HHH
Q 021893          275 DVL  277 (306)
Q Consensus       275 ~~l  277 (306)
                      +++
T Consensus       400 ~~~  402 (402)
T TIGR03542       400 EAL  402 (402)
T ss_pred             hhC
Confidence            753

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=99.83  E-value=3.6e-19  Score=163.92  Aligned_cols=215  Identities=14%  Similarity=0.210  Sum_probs=154.2

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |++.+++.++   +++++|+++.++|++|.+.+    +++|.++|+++|+++++|++|. ++.  ..+...  ...+|++
T Consensus       162 ~~~~l~~~i~---~~t~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~a~~-~g~--~~~~~~--~~~~d~~  229 (424)
T PLN02855        162 DVEQLKELLS---EKTKLVATHHVSNVLGSILP----VEDIVHWAHAVGAKVLVDACQS-VPH--MPVDVQ--TLGADFL  229 (424)
T ss_pred             CHHHHHHHhc---cCceEEEEeCccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCC--cCCCch--hcCCCEE
Confidence            7899999887   57999999999999999998    9999999999999999999996 211  122223  3345655


Q ss_pred             --EecccccCCcccceeeEeCHHHHhhcCCCCcc---------------------CCCCCCHHHHHHHHHHHHHHhh---
Q 021893          126 --ILGKALGGGVIPVSAVLADKEVMLCIQPGEHG---------------------STFGGNPLASAVAIASLDVIRD---  179 (306)
Q Consensus       126 --s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~aa~~al~~~~~---  179 (306)
                        +++| +.|.. ++|++++++++++.+.+...+                     ...+.+..+.+++.++++.+.+   
T Consensus       230 ~~s~~K-~~gp~-G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~  307 (424)
T PLN02855        230 VASSHK-MCGPT-GIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGM  307 (424)
T ss_pred             Eeeccc-ccCCC-ccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCH
Confidence              6779 44444 689999999988777543110                     0112455566677788887755   


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhCCCceee------EEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccCC---
Q 021893          180 EKLAERSAHLGEELRQHLFKIQQQFPNYVKE------VRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPTH---  249 (306)
Q Consensus       180 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~---  249 (306)
                      +++.++..++.+++++.|+++.    +....      ....+.++.+.++.    ....++.+.|.++ ||.++.+.   
T Consensus       308 ~~i~~~~~~l~~~l~~~L~~~~----g~~i~~~~~~~~~~r~~~v~~~~~~----~~~~~v~~~L~~~~gI~v~~g~~c~  379 (424)
T PLN02855        308 DRIHEYEVELGTYLYEKLSSVP----GVRIYGPKPSEGVGRAALCAFNVEG----IHPTDLSTFLDQQHGVAIRSGHHCA  379 (424)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCC----CEEEeCCCcccccCcccEEEEEECC----cCHHHHHHHhcccCCEEEechhhhh
Confidence            3456777777788877776641    11111      11234566676653    4567899999888 99988532   


Q ss_pred             ---------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          250 ---------DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       250 ---------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                               .+++|++++.++|++|++.+++.|++++. .+..
T Consensus       380 ~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~-~~~~  421 (424)
T PLN02855        380 QPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIA-FFSS  421 (424)
T ss_pred             HHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHH-HHHh
Confidence                     46899999999999999999999999988 6543

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=99.83  E-value=1.4e-19  Score=162.76  Aligned_cols=252  Identities=15%  Similarity=0.170  Sum_probs=158.9

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-----CCHHHHHHHHHhcCCcEEEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-----GDITALEKIFKESGDQIAGFLF   66 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-----~d~~~le~~i~~~~~~~~~v~v   66 (306)
                      ..|++..|+.++-...+.++..+.+..-...|.++.           +..++.     .|++++++       .++++++
T Consensus        78 ~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~-------~~~~v~~  150 (353)
T PRK05387         78 EQVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR-------PNGGIIF  150 (353)
T ss_pred             HHEEEcCCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHh-------cCCEEEE
Confidence            357888888888666655554433222112232211           122332     25666542       2456677


Q ss_pred             ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccceeeEeCH
Q 021893           67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLADK  145 (306)
Q Consensus        67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~g~~~~~~  145 (306)
                      +.++|++|.+.+ .+.+++|.+.+  +++++|+||+|.+|+.....-..+.......+.|+||.++ +|+ |+||+++++
T Consensus       151 ~~P~NPtG~~~~-~~~~~~l~~~~--~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-R~G~~~~~~  226 (353)
T PRK05387        151 PNPNAPTGIALP-LAEIERILAAN--PDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGL-RVGFAIGHP  226 (353)
T ss_pred             eCCCCCCCCCCC-HHHHHHHHHhC--CCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhh-hceeeecCH
Confidence            777999997765 55555555443  2999999999987642211100122222223448999999 999 999999999


Q ss_pred             HHHhhcCCCCcc-CCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893          146 EVMLCIQPGEHG-STFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD  223 (306)
Q Consensus       146 ~~~~~~~~~~~~-~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~  223 (306)
                      ++++.+...... ..++.+.+++.++..+++... .++..++++++++.+.+.|++.+     .. ..+..+.++|+.++
T Consensus       227 ~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~-~~~~~~~~~~~~~~  300 (353)
T PRK05387        227 ELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEALG-----FE-VLPSKANFVFARHP  300 (353)
T ss_pred             HHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-----Ce-ECCCcCcEEEEECC
Confidence            988887654332 345667788877777774311 12345566666666666666542     22 22345667777655


Q ss_pred             cCCChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          224 KTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       224 ~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .    .+..++++.|.++||.+.+.    ..+++|+++.   +.++++.++++|+++++
T Consensus       301 ~----~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~~~~~~~~~L~~~~~  352 (353)
T PRK05387        301 S----HDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG---TDEEMEALVDALKEILA  352 (353)
T ss_pred             C----CCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence            2    45778999999999998653    2578999953   67999999999998875

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=99.83  E-value=3.4e-19  Score=159.00  Aligned_cols=251  Identities=12%  Similarity=0.059  Sum_probs=164.7

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccc---cCCCCCC---------CcccccCCCHHHHHHHHHhcCCcEEEEEEcccc
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIR---GFGPLLP---------GHLKVDFGDITALEKIFKESGDQIAGFLFEPIQ   70 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~---~~~~~~~---------~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~   70 (306)
                      ..|++++|+|++......++.++....-   ...|.++         +...+.++|++.+++    . +++++|++++ .
T Consensus        72 e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~~~l~~l~~----~-~~~~lIiitg-~  145 (346)
T TIGR03576        72 EKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLAGAEYFESDELSELKK----I-DGTSLVVITG-S  145 (346)
T ss_pred             ceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchhHHHHHHHcCCEEeccCCHHHHhh----C-cCceEEEEEC-C
Confidence            5799999999998888777776433221   1112221         123344567666432    2 3577888876 4


Q ss_pred             CCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcc--cccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893           71 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL--ARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM  148 (306)
Q Consensus        71 ~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~--~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~  148 (306)
                      +++|.+. +.+.|++|.++|++||+++++||+|+.+  +..|... ...++.+.-+.|+||++ +|+ ++||++++++++
T Consensus       146 s~~G~v~-~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~-~~~~~~divv~s~SKal-aG~-r~G~v~~~~~li  221 (346)
T TIGR03576       146 TMDLKVV-SEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPP-ALDLGADLVVTSTDKLM-DGP-RGGLLAGRKELV  221 (346)
T ss_pred             CCCCccc-CHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCC-HHHcCCcEEEeccchhc-ccc-ceEEEEeCHHHH
Confidence            7788764 5777999999999999999999999842  1122211 12223233345899965 466 899999999999


Q ss_pred             hhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCCh
Q 021893          149 LCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP  228 (306)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~  228 (306)
                      +.+........++.+++.++++.++++....+...+.++++.+.+++.++.+  .   .  . +..+.++++.++.    
T Consensus       222 ~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~~--~---~--~-~~~~~f~~~~~~~----  289 (346)
T TIGR03576       222 DKIKSVGEQFGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDKL--N---V--E-RTPTGFVIKGVEE----  289 (346)
T ss_pred             HHHHHhhcCcccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhC--C---C--C-cCCCeEEEEeCCC----
Confidence            9888765555556688888888999976544445666767777666666632  1   1  1 2233366666642    


Q ss_pred             hhH-HHHHHHHHHCCceeccC-----CCCEEEEeCCCCCCHH---HHHHHHHHHHHHH
Q 021893          229 VSA-YDICLKMKERGILAKPT-----HDTIVRLTPPLSISSN---ELQEGSKALHDVL  277 (306)
Q Consensus       229 ~~~-~~~~~~l~~~Gi~~~~~-----~~~~lRi~~~~~~t~~---~i~~~~~~l~~~l  277 (306)
                      .+. +...+.|.++||.+.|+     .++++||+  +..+++   +++.+++.|++.+
T Consensus       290 ~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis--~~~~~~~~~~~~~~~~al~~~~  345 (346)
T TIGR03576       290 EKLIEIGLDLLRNYGIITITAVGMPGASKTLRFD--LAAKDAERIGDDYLVEAVKDSL  345 (346)
T ss_pred             CCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEE--EecChHHhcCHHHHHHHHHhcc
Confidence            123 33445556779999985     26799999  444444   7999999887654

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]

Probab=99.83  E-value=2.1e-18  Score=149.08  Aligned_cols=268  Identities=17%  Similarity=0.210  Sum_probs=181.1

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCc----------ccccCC---------CHHHHHHHHHh---cCCc
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH----------LKVDFG---------DITALEKIFKE---SGDQ   60 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~---------d~~~le~~i~~---~~~~   60 (306)
                      ++||+..|+.-..-+.+.-+..+....-.=.|+|+|+          .++|..         +.++||+++++   .+-+
T Consensus       147 ~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~k  226 (471)
T KOG0256|consen  147 ERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLK  226 (471)
T ss_pred             cceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCc
Confidence            5688888888776666666666655544444888873          233321         58999988885   2357


Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-c---cCCCCCc----EEEecccc
Q 021893           61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-D---WEEVRPD----MVILGKAL  131 (306)
Q Consensus        61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~---~~~~~~d----~~s~sK~~  131 (306)
                      ++.+++.+++|+-|.+. ++|.|..+.+.+.++++.+|+||+|++-......| ++ +   ....++|    +.++||-+
T Consensus       227 VkGvlitNPsNPLG~~~-~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~  305 (471)
T KOG0256|consen  227 VKGVLITNPSNPLGTTL-SPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDF  305 (471)
T ss_pred             eeEEEEeCCCCCCCCcc-CHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEecccc
Confidence            89999999999998765 79999999999999999999999998732333222 11 1   1112344    34999999


Q ss_pred             c-CCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCC
Q 021893          132 G-GGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPN  206 (306)
Q Consensus       132 ~-~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~  206 (306)
                      | +|+ |+|.+.. ++++....++....+..+....-+.+.+-+=+++.+   .+..++++...+++.+.|++++     
T Consensus       306 GlpGf-RvGviYS~ne~VvsaA~kmssf~~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~lg-----  379 (471)
T KOG0256|consen  306 GLPGF-RVGVIYSNNEDVVSAATKMSSFGLVSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKALG-----  379 (471)
T ss_pred             CCCce-EEEEEEecChHHHHHHHHHhhccCCcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhcC-----
Confidence            9 999 9999987 577777777644444333322222222211122211   2235566666666777777774     


Q ss_pred             ceeeEEEeeeEEEEEEecC--CChhh-HHHHHHHHHHC-CceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          207 YVKEVRGRGLFNAVEFDKT--ALPVS-AYDICLKMKER-GILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       207 ~~~~~~~~g~~~~i~~~~~--~~~~~-~~~~~~~l~~~-Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      ......+.|+++|+++...  ....+ ..++.+.++++ ++-++|+      -+||+|++. ....++.++-+++||+..
T Consensus       380 I~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcF-An~~~~t~~~am~Ri~~~  458 (471)
T KOG0256|consen  380 IPCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCF-ANMSEETLEVAMRRLKQF  458 (471)
T ss_pred             CceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEe-ccCCHHHHHHHHHHHHHH
Confidence            5557789999999997642  11222 34678888888 9999997      379999994 344555666699999988


Q ss_pred             Hh
Q 021893          277 LE  278 (306)
Q Consensus       277 l~  278 (306)
                      +.
T Consensus       459 ~~  460 (471)
T KOG0256|consen  459 LD  460 (471)
T ss_pred             HH
Confidence            87

>PRK09105 putative aminotransferase; Provisional

Probab=99.83  E-value=1.8e-19  Score=162.82  Aligned_cols=249  Identities=16%  Similarity=0.157  Sum_probs=156.5

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-----CCHHHHHHHHHhcCCcEEEEEEc
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-----GDITALEKIFKESGDQIAGFLFE   67 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-----~d~~~le~~i~~~~~~~~~v~v~   67 (306)
                      .|++..|+-++-...+..+..+.+..-...|.|+.           ++.++.     .|++++++. .   +++++++++
T Consensus        97 ~I~it~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~-~---~~~~~v~l~  172 (370)
T PRK09105         97 HVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAA-D---PNAGLIYIC  172 (370)
T ss_pred             hEEEcCChHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhc-C---CCCCEEEEe
Confidence            46666666666555555554432222222233332           122222     356777654 2   457788888


Q ss_pred             cccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc---EEEeccccc-CCcccceeeEe
Q 021893           68 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD---MVILGKALG-GGVIPVSAVLA  143 (306)
Q Consensus        68 ~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d---~~s~sK~~~-~G~~~~g~~~~  143 (306)
                      +++|++|.+ .+.+.++++.+.|+ +++++|+||+|.+|+......  +......+   +.||||.+| +|+ |+||+++
T Consensus       173 nP~NPTG~~-~~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~~s~~--~~~~~~~~vi~~~SfSK~~g~~Gl-RiG~~v~  247 (370)
T PRK09105        173 NPNNPTGTV-TPRADIEWLLANKP-AGSVLLVDEAYIHFSDAPSVV--DLVAQRKDLIVLRTFSKLYGMAGM-RLGLAAA  247 (370)
T ss_pred             CCCCCCCcC-cCHHHHHHHHHhCC-CCcEEEEECchHHhccCcchH--HHHhhCCCEEEEecccHhhcCCcc-ceeeeec
Confidence            889999976 57888888888754 599999999998764321111  11112233   338999998 899 9999999


Q ss_pred             CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE
Q 021893          144 DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF  222 (306)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~  222 (306)
                      ++++++.+...   ..+..+.+++.++.++++... .++..++++++++.+.+.|++..     +. ..+..|.++++.+
T Consensus       248 ~~~~i~~l~~~---~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-----~~-~~~~~~~f~~~~~  318 (370)
T PRK09105        248 RPDLLAKLARF---GHNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKKG-----YK-CTPSQANCFMVDV  318 (370)
T ss_pred             CHHHHHHHHhc---CCCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCC-----CC-cCCCCCcEEEEeC
Confidence            99999887653   234456667777776664311 12234555666666666666542     21 1233455555544


Q ss_pred             ecCCChhhHHHHHHHHHHCCceeccC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          223 DKTALPVSAYDICLKMKERGILAKPT---HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       223 ~~~~~~~~~~~~~~~l~~~Gi~~~~~---~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +     .+..++++.|.++||.++..   .++++|+++.   ++++++.+++.|+++++
T Consensus       319 ~-----~~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris~~---~~~~~~~l~~al~~~~~  369 (370)
T PRK09105        319 K-----RPAKAVADAMAKQGVFIGRSWPIWPNWVRVTVG---SEEEMAAFRSAFAKVMR  369 (370)
T ss_pred             C-----CCHHHHHHHHHHCCcEEecCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHhh
Confidence            3     24678999999999998522   3689999943   67889999998887654

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=99.83  E-value=8.5e-19  Score=157.81  Aligned_cols=218  Identities=17%  Similarity=0.166  Sum_probs=154.1

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|++.+++.+++  .++++++++++++++|.+.+    +++|.++|+++|+++++|++|+ +|.  ..+....++.+..+
T Consensus       111 ~~~~~l~~~i~~--~~~~~v~i~~~~~~~G~~~~----~~~i~~~a~~~~~~li~D~~~~-~g~--~~~~~~~~~~d~~~  181 (356)
T cd06451         111 VSPEEIAEALEQ--HDIKAVTLTHNETSTGVLNP----LEGIGALAKKHDALLIVDAVSS-LGG--EPFRMDEWGVDVAY  181 (356)
T ss_pred             CCHHHHHHHHhc--cCCCEEEEeccCCCcccccC----HHHHHHHHHhcCCEEEEeeehh-ccC--ccccccccCccEEE
Confidence            478999999974  26889988888899999888    9999999999999999999986 221  12223333333333


Q ss_pred             EEecccccCCcccceeeEeCHHHHhhcCC--CCc-----------------cCCCCCCHHHHHHHHHHHHHHhh---ccH
Q 021893          125 VILGKALGGGVIPVSAVLADKEVMLCIQP--GEH-----------------GSTFGGNPLASAVAIASLDVIRD---EKL  182 (306)
Q Consensus       125 ~s~sK~~~~G~~~~g~~~~~~~~~~~~~~--~~~-----------------~~~~~~~~~~~~aa~~al~~~~~---~~~  182 (306)
                      .+.+|.++++. ++|+++.++++++.+..  ...                 ....+.+...+.++.++++.+..   +.+
T Consensus       182 ~s~~K~l~~p~-g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~  260 (356)
T cd06451         182 TGSQKALGAPP-GLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENR  260 (356)
T ss_pred             ecCchhccCCC-CcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHH
Confidence            46679999877 88999999998877652  110                 11123345556666777777654   345


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCceeeEEE-eeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC----CCCEEEEe
Q 021893          183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT----HDTIVRLT  256 (306)
Q Consensus       183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~~~~lRi~  256 (306)
                      .++.+++.+++++.|+.....   ....... .+.+.++.+++   ..+..++++.|.++ ||.+.++    .++++|++
T Consensus       261 ~~~~~~~~~~l~~~L~~~g~~---~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis  334 (356)
T cd06451         261 WARHRRLAKALREGLEALGLK---LLAKPELRSPTVTAVLVPE---GVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIG  334 (356)
T ss_pred             HHHHHHHHHHHHHHHHHcCCe---eccCcccCCCceEEEECCC---CCCHHHHHHHHHHhCCEEEecccccccCCEEEEe
Confidence            677778888888888876322   1111111 23344554442   34577899999999 9999864    35689999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHh
Q 021893          257 PPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       257 ~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ++..++++|+++++++|+++++
T Consensus       335 ~~~~~~~e~v~~~~~~l~~~~~  356 (356)
T cd06451         335 HMGEATREDVLGVLSALEEALK  356 (356)
T ss_pred             cCCCCCHHHHHHHHHHHHHHhC
Confidence            9999999999999999998763

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.83  E-value=1.2e-18  Score=159.01  Aligned_cols=222  Identities=18%  Similarity=0.163  Sum_probs=162.7

Q ss_pred             CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHH--HHHcCCEEEEehhhhcccccccccccccCCCCC
Q 021893           46 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDL--CSKYNILMIADEIQSGLARSGRMLASDWEEVRP  122 (306)
Q Consensus        46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l--~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~  122 (306)
                      |++++++.++++. +++++|+++++.+++|.+.+    +++|.++  |+++|+++|+|++|+ ++  ...+..+.++.+.
T Consensus       122 ~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~----~~~i~~l~~~~~~g~~~vvD~v~s-~g--~~~id~~~~~~D~  194 (401)
T PLN02409        122 DLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND----LAGVRKLLDCAQHPALLLVDGVSS-IG--ALDFRMDEWGVDV  194 (401)
T ss_pred             CHHHHHHHHhhCcCCCccEEEEEeecccccccCC----HHHHHHHHhhhccCcEEEEEcccc-cC--CccccccccCccE
Confidence            6999999998632 36899999999999999988    8999999  999999999999997 21  1223233344333


Q ss_pred             cEEEecccccCCcccceeeEeCHHHHhhcCCCCc---------------cC---CCCCCHHHHHHHHHHHHHHhh---cc
Q 021893          123 DMVILGKALGGGVIPVSAVLADKEVMLCIQPGEH---------------GS---TFGGNPLASAVAIASLDVIRD---EK  181 (306)
Q Consensus       123 d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~---------------~~---~~~~~~~~~~aa~~al~~~~~---~~  181 (306)
                      -+.+.+|+++++. ++|+++.++++++.+.+...               .+   .++.+...+.++.++++.+.+   ++
T Consensus       195 ~~~s~~K~l~~P~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~  273 (401)
T PLN02409        195 ALTGSQKALSLPT-GLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLEN  273 (401)
T ss_pred             EEEcCccccCcCC-CcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHH
Confidence            3346679999877 89999999998887654210               11   335566677788888888765   45


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCceee--EEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC----CCCEEE
Q 021893          182 LAERSAHLGEELRQHLFKIQQQFPNYVKE--VRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT----HDTIVR  254 (306)
Q Consensus       182 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~----~~~~lR  254 (306)
                      +.++.+++.+++++.|++++..   ....  ....+.+.++.+++   +.+..++.+.|. +.|+.+..+    .++.||
T Consensus       274 i~~~~~~l~~~l~~~L~~~g~~---~~~~~~~~~s~~v~~~~~p~---~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~R  347 (401)
T PLN02409        274 VIARHARLGEATRLAVEAWGLK---LCTKKPEWRSDTVTAVVVPE---GIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFR  347 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCe---eccCChhhcccceEEEeCCC---CCCHHHHHHHHHHhCCEEEEcCCCcccCCEEE
Confidence            6788888888998888876322   1111  11133455665553   456678888876 559998865    357899


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          255 LTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       255 i~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      ++++..++.+|+..++++|++++. ++.
T Consensus       348 ig~~g~~~~~~~~~~~~~~~~~l~-~~g  374 (401)
T PLN02409        348 IGHLGNVNELQLLGALAGVEMVLK-DVG  374 (401)
T ss_pred             EcCCCCCCHHHHHHHHHHHHHHHH-HcC
Confidence            999999999999999999999999 765

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.82  E-value=1.9e-18  Score=156.20  Aligned_cols=223  Identities=12%  Similarity=0.107  Sum_probs=156.5

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|++++++.++++ ++++++.+.++++++|.+.+    +++|.++|+++|+++|+|++|+ ++.  ..+....++.+.-+
T Consensus       117 ~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~----~~~i~~l~~~~~~~livDa~~~-~g~--~~~~~~~~~~d~~v  188 (368)
T PRK13479        117 PDAAEVEAALAAD-PRITHVALVHCETTTGILNP----LDEIAAVAKRHGKRLIVDAMSS-FGA--IPIDIAELGIDALI  188 (368)
T ss_pred             CCHHHHHHHHHhC-CCCcEEEEEcccCccccccC----HHHHHHHHHHcCCEEEEEcccc-cCC--ccccccccCceEEE
Confidence            4799999999864 45778888889999999988    9999999999999999997774 432  22333333333334


Q ss_pred             EEecccccCCcccceeeEeCHHHHhhcCCCC-----------------ccCCCCCCHHHHHHHHHHHHHHhh----ccHH
Q 021893          125 VILGKALGGGVIPVSAVLADKEVMLCIQPGE-----------------HGSTFGGNPLASAVAIASLDVIRD----EKLA  183 (306)
Q Consensus       125 ~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~aa~~al~~~~~----~~~~  183 (306)
                      .+++|++.|.. ++||+++++++++.+....                 ....++.+...+.++.++++.+.+    ++..
T Consensus       189 ~s~~K~l~g~~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~  267 (368)
T PRK13479        189 SSANKCIEGVP-GFGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARG  267 (368)
T ss_pred             ecCccccccCC-CceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHH
Confidence            47779998776 7899999999887765431                 111235566677777788877644    2345


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC---CCEEEEeCCC
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---DTIVRLTPPL  259 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~~~lRi~~~~  259 (306)
                      +++.++++++++.|++++...   .... ........+.++.. ...+..++.+.|.++||.+.++.   .+++|++...
T Consensus       268 ~~~~~~~~~l~~~L~~~g~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~  343 (368)
T PRK13479        268 ARYANNQRTLVAGMRALGFEP---LLDAEIQSPIIVTFHAPAD-PAYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIG  343 (368)
T ss_pred             HHHHHHHHHHHHHHHHcCCcc---cCCchhcCceEEEEECCCC-CCcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCC
Confidence            677778888888887763221   1110 11222334433321 12356789999999999998753   3589999767


Q ss_pred             CCCHHHHHHHHHHHHHHHhhhc
Q 021893          260 SISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       260 ~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .++++|++.++++|++++. ++
T Consensus       344 ~~t~edi~~~l~~L~~~l~-~~  364 (368)
T PRK13479        344 DVDAADIRRLVAAIAEALY-WM  364 (368)
T ss_pred             CCCHHHHHHHHHHHHHHHH-Hc
Confidence            7899999999999999988 65

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=99.82  E-value=2.6e-19  Score=162.00  Aligned_cols=253  Identities=21%  Similarity=0.197  Sum_probs=161.7

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-----CCHHHHHHHHHhcCCcEEEEEEc
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-----GDITALEKIFKESGDQIAGFLFE   67 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-----~d~~~le~~i~~~~~~~~~v~v~   67 (306)
                      .|++.+|+.++-...+.++..+.+..-...|.++.           +..++.     .|++++++.++.   ++++++++
T Consensus        90 ~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~---~~~~v~l~  166 (371)
T PRK05166         90 RIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVAR---APRMLMFS  166 (371)
T ss_pred             HEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhhc---CCCEEEEe
Confidence            57777777777655544443332222222233322           222322     268999988873   56788888


Q ss_pred             cccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccC-CC---CCcEEEeccccc-CCcccceee
Q 021893           68 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWE-EV---RPDMVILGKALG-GGVIPVSAV  141 (306)
Q Consensus        68 ~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~-~~---~~d~~s~sK~~~-~G~~~~g~~  141 (306)
                      .++|++|.+. +.+.+++|.++|++ ++++|+||+|.++...+...+ .... ..   ...+.||||.++ +|+ |+||+
T Consensus       167 ~p~NPtG~~~-~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~Gl-RiG~~  243 (371)
T PRK05166        167 NPSNPVGSWL-TADQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGL-RVGYG  243 (371)
T ss_pred             CCCCCCCCCC-CHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchh-heeee
Confidence            8899999654 68888888888864 899999999997753221111 1111 11   123448999999 999 99997


Q ss_pred             Ee-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893          142 LA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA  219 (306)
Q Consensus       142 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~  219 (306)
                      ++ ++++++.+....  ..+..+.+++.++.+++..-. -++..+.++++++.+.+.|+...     .. ..+..|.++|
T Consensus       244 i~~~~~l~~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-----~~-~~p~~g~fl~  315 (371)
T PRK05166        244 LVSDPELVGLLDRVR--TPFNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEMG-----YR-IAPSRANFLF  315 (371)
T ss_pred             ecCCHHHHHHHHHhc--cCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCc-----Ce-eCCCcCCEEE
Confidence            75 678877765432  245567777777776664211 12234455555566666666541     22 2345678888


Q ss_pred             EEEecCCChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          220 VEFDKTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       220 i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +.++.     +..++++.|.++||.+.|+    ..+++|++..   +.++.+.+.+.|++++.
T Consensus       316 ~~~~~-----~~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~---~~~~~~~l~~~l~~i~~  370 (371)
T PRK05166        316 FDARR-----PASAVAEALLRQGVIVKPWKQPGFETFIRVSIG---SPEENDHFVAALDKVLE  370 (371)
T ss_pred             EeCCC-----CHHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHhh
Confidence            87542     4678999999999999875    2679999943   56777888888776653

>PLN02672 methionine S-methyltransferase

Probab=99.82  E-value=4.9e-19  Score=173.98  Aligned_cols=263  Identities=11%  Similarity=0.062  Sum_probs=161.8

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL   65 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~   65 (306)
                      .|++..|+.++-.....++..+.+..-...|.|+.           ++.+|.       .|++.|++++++. .+..+++
T Consensus       756 ~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~-~~~~I~L  834 (1082)
T PLN02672        756 EFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETV-KKPWVYI  834 (1082)
T ss_pred             EEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC-CCCEEEE
Confidence            56666666555544445555443332222333332           222332       2678899998642 1245666


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc---ccc----cC-CC-----CCcEEEeccccc
Q 021893           66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML---ASD----WE-EV-----RPDMVILGKALG  132 (306)
Q Consensus        66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~---~~~----~~-~~-----~~d~~s~sK~~~  132 (306)
                      ++|++|+||. +++++.+++|.++|++||++||+||+|+++.+.+...   ++.    .. ..     ...+.||||.++
T Consensus       835 ~nPnhNPTG~-v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~  913 (1082)
T PLN02672        835 SGPTINPTGL-LYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELL  913 (1082)
T ss_pred             ECcCCCCcCc-cCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhc
Confidence            7776699995 5689999999999999999999999999765544321   010    11 10     112338999998


Q ss_pred             -CCcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--h-------ccHHHHHHHHHHHHHHHHHHHH
Q 021893          133 -GGVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--D-------EKLAERSAHLGEELRQHLFKIQ  201 (306)
Q Consensus       133 -~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~-------~~~~~~~~~~~~~l~~~L~~~~  201 (306)
                       +|+ |+||++++ +++++.+........  .+...+.++.+++....  .       .+..+.++++++++.+.|++. 
T Consensus       914 lpGL-RIGylIap~~eLi~~l~~~~~~s~--~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-  989 (1082)
T PLN02672        914 SGGH-EFGFLALNDSVLIDAFHSAPGLSR--PHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-  989 (1082)
T ss_pred             cHHH-HheeEEeCCHHHHHHHHHhhhhcC--CCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence             899 99999986 458887764321111  12223333333332221  1       123444566666666666654 


Q ss_pred             hhCCCceeeEEEeeeEEEEEEecC-------C-------ChhhHHHHHHHHHHC-CceeccC----CCCEEEEeCCCCCC
Q 021893          202 QQFPNYVKEVRGRGLFNAVEFDKT-------A-------LPVSAYDICLKMKER-GILAKPT----HDTIVRLTPPLSIS  262 (306)
Q Consensus       202 ~~~~~~~~~~~~~g~~~~i~~~~~-------~-------~~~~~~~~~~~l~~~-Gi~~~~~----~~~~lRi~~~~~~t  262 (306)
                          ++....+..|.++|+.+...       +       ...++.++++.|+++ ||.+.|+    .++++|++  +..+
T Consensus       990 ----Gi~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIs--fa~~ 1063 (1082)
T PLN02672        990 ----GWDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFS--FALE 1063 (1082)
T ss_pred             ----CCeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEE--ecCC
Confidence                23334456677777764310       0       013567899999976 9999985    35899999  5568


Q ss_pred             HHHHHHHHHHHHHHHh
Q 021893          263 SNELQEGSKALHDVLE  278 (306)
Q Consensus       263 ~~~i~~~~~~l~~~l~  278 (306)
                      ++++++++++|+++.+
T Consensus      1064 ~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672       1064 DSEFDRALKAIARFKE 1079 (1082)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            8899999999998765

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=99.82  E-value=9.9e-19  Score=153.27  Aligned_cols=257  Identities=18%  Similarity=0.221  Sum_probs=181.2

Q ss_pred             ceEEEEecCCCCcccchhcc--cCCcc--ccccC----------------CCCCCCcccccCC-----CHHHHHHHHHhc
Q 021893            3 AIIVSCCGCFHGRTLAAISM--SCDNE--AIRGF----------------GPLLPGHLKVDFG-----DITALEKIFKES   57 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~--~~~~~--~~~~~----------------~~~~~~~~~~~~~-----d~~~le~~i~~~   57 (306)
                      .+|++++|++.+...+..++  .....  ..+..                +-...++.+.|.+     |+++|+++|+  
T Consensus        62 ~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~--  139 (386)
T COG1104          62 EEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALR--  139 (386)
T ss_pred             CeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcC--
Confidence            58999999999998887763  22110  00000                0001224444443     7999999999  


Q ss_pred             CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEec--ccccCCc
Q 021893           58 GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGV  135 (306)
Q Consensus        58 ~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~  135 (306)
                       ++|.+|.|.++||.+|.++|    +++|.++|+++|+++++|.+|+    .|+. +.+...+..|++|||  |-.| .-
T Consensus       140 -~~T~LVSim~aNnE~G~IQp----I~ei~~i~k~~~i~fHvDAvQa----~Gki-pi~~~~~~vD~ls~SaHK~~G-pk  208 (386)
T COG1104         140 -PDTILVSIMHANNETGTIQP----IAEIGEICKERGILFHVDAVQA----VGKI-PIDLEELGVDLLSFSAHKFGG-PK  208 (386)
T ss_pred             -CCceEEEEEecccCeeeccc----HHHHHHHHHHcCCeEEEehhhh----cCce-eccccccCcceEEeehhhccC-CC
Confidence             67999999999999999999    9999999999999999999998    3331 244444568999998  5444 33


Q ss_pred             ccceeeEeCHHHHhhcCCCCccCCC-------CCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCC
Q 021893          136 IPVSAVLADKEVMLCIQPGEHGSTF-------GGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPN  206 (306)
Q Consensus       136 ~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~  206 (306)
                       ++|+++.++.+  .+.+..+++..       +.|..+.++...|++...+  +....++.++++++.+.|.+..+.   
T Consensus       209 -GiGaLyv~~~~--~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~---  282 (386)
T COG1104         209 -GIGALYVRPGV--RLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPD---  282 (386)
T ss_pred             -ceEEEEECCCC--ccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc---
Confidence             67888876664  33333222222       4577777777777777655  334667777788888877765322   


Q ss_pred             cee--e-EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----------------------CCCEEEEeCCCC
Q 021893          207 YVK--E-VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-----------------------HDTIVRLTPPLS  260 (306)
Q Consensus       207 ~~~--~-~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----------------------~~~~lRi~~~~~  260 (306)
                      ...  . .......+.+.++    +...+.+.-.|..+||+++.+                       ..+.|||+++..
T Consensus       283 ~~~~g~~~~rlP~~~~~~f~----gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~  358 (386)
T COG1104         283 VYLNGDDEPRLPNILNFSFP----GVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRF  358 (386)
T ss_pred             EEEcCCcccCCCCeEEEEeC----CCcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCC
Confidence            111  1 2234455566666    467888888888889999853                       137899999999


Q ss_pred             CCHHHHHHHHHHHHHHHhhhcCC
Q 021893          261 ISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       261 ~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      +|++|++.+++.|.++++ .+++
T Consensus       359 tt~eei~~~~~~l~~~i~-~lr~  380 (386)
T COG1104         359 TTEEEIDAAAEALKEIIK-RLRE  380 (386)
T ss_pred             CCHHHHHHHHHHHHHHHH-HHhh
Confidence            999999999999999999 7655

>TIGR01814 kynureninase kynureninase

Probab=99.82  E-value=2.1e-18  Score=157.84  Aligned_cols=217  Identities=18%  Similarity=0.211  Sum_probs=152.4

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~~~~~~~d~  124 (306)
                      |++.+++.++...+++++|+++++++++|.+.+    +++|.++|+++|+++++|++|+    .|. .+....++++..+
T Consensus       157 ~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~----~~~i~~~~~~~g~~~~vD~aq~----~G~~~id~~~~gvD~~~  228 (406)
T TIGR01814       157 RLEDILDTIEKNGDDIAVILLSGVQYYTGQLFD----MAAITRAAHAKGALVGFDLAHA----VGNVPLDLHDWGVDFAC  228 (406)
T ss_pred             CHHHHHHHHHhcCCCeEEEEEeccccccceecC----HHHHHHHHHHcCCEEEEEcccc----cCCcccccccCCCCEEE
Confidence            688999988765578999999999999999999    9999999999999999999998    222 2333444444444


Q ss_pred             EEecccccCCcccceeeEeCHHHHhhcCCCCcc-----------------------CCCCCCHHHHHHHHHHHHHHhh--
Q 021893          125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEHG-----------------------STFGGNPLASAVAIASLDVIRD--  179 (306)
Q Consensus       125 ~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~aa~~al~~~~~--  179 (306)
                      .+..|+++||. + |.++..++....+.+...+                       ...+.+..++.++.++++.+.+  
T Consensus       229 ~s~hK~l~g~p-G-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g  306 (406)
T TIGR01814       229 WCTYKYLNAGP-G-AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAG  306 (406)
T ss_pred             EcCccccCCCC-C-eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcC
Confidence            45669998777 6 5555544433333331100                       0123466677778889988865  


Q ss_pred             -ccHHHHHHHHHHHHHHHHHHHHhhCCCc-eee---EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEE
Q 021893          180 -EKLAERSAHLGEELRQHLFKIQQQFPNY-VKE---VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVR  254 (306)
Q Consensus       180 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~---~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lR  254 (306)
                       +...++.+++.+++++.|++.....++. +..   ....+.++.+.++     ....++.+.|.++||.+....++.+|
T Consensus       307 ~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-----~~~~~~~~~L~~~gi~v~~~~~~~iR  381 (406)
T TIGR01814       307 MEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-----VPGKAVFQALIKRGVIGDKREPSVIR  381 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-----CCHHHHHHHHHHCCEEEeccCCCeEE
Confidence             4467788888888888887652100001 111   1123445566554     24568999999999998876668999


Q ss_pred             EeC-CCCCCHHHHHHHHHHHHHHH
Q 021893          255 LTP-PLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       255 i~~-~~~~t~~~i~~~~~~l~~~l  277 (306)
                      +++ +.++|++||+.++++|++++
T Consensus       382 iS~~~~~nt~~did~l~~~l~~~~  405 (406)
T TIGR01814       382 VAPVPLYNTFVDVYDAVNVLEEIL  405 (406)
T ss_pred             EechhccCCHHHHHHHHHHHHHHh
Confidence            999 68999999999999998765

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=99.82  E-value=1.5e-19  Score=162.24  Aligned_cols=206  Identities=16%  Similarity=0.147  Sum_probs=140.3

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~d~  124 (306)
                      |++++++++.    ++++++++.++|+||... +.+.+++|.+.|++ +.++|+||+|.+|........ ....+....+
T Consensus       135 d~~~l~~~~~----~~~lv~l~nPnNPTG~~~-~~~~l~~l~~~~~~-~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~  208 (351)
T PRK01688        135 DLPAIADNLD----GVKVVYVCSPNNPTGNLI-NPQDLRTLLELTRG-KAIVVADEAYIEFCPQASLAGWLAEYPHLVIL  208 (351)
T ss_pred             CHHHHHHhcc----CCcEEEEeCCCCCCCCCC-CHHHHHHHHHhCCC-CcEEEEECchhhcCCCCChHHHHhhCCCEEEE
Confidence            6788887763    578888889999999765 78888888888876 688999999988742221111 1222222223


Q ss_pred             EEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHH
Q 021893          125 VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKI  200 (306)
Q Consensus       125 ~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~  200 (306)
                      -||||.+| +|+ |+||+++++++++.+.+..  ..+..+.+++.++.++++....   .+..+.+.+.++++.+.|+.+
T Consensus       209 rSfSK~~glaGl-RiGy~i~~~~~i~~l~~~~--~~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~  285 (351)
T PRK01688        209 RTLSKAFALAGL-RCGFTLANEEVINLLLKVI--APYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEI  285 (351)
T ss_pred             ecchHhhcCHHH-HHhHHhCCHHHHHHHHhcc--CCCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            49999999 899 9999999999988887532  3455666767676666652111   122344444555565666543


Q ss_pred             HhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----CCCEEEEeCCCCCCHHHHHHHHHHH
Q 021893          201 QQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-----HDTIVRLTPPLSISSNELQEGSKAL  273 (306)
Q Consensus       201 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~~lRi~~~~~~t~~~i~~~~~~l  273 (306)
                          ++.....+..++++++.+.      ++.++.+.|+++||.++++     .++++|+++.   +.++++.++++|
T Consensus       286 ----~~~~~~~ps~~nfi~~~~~------~~~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~---~~~e~~~l~~al  350 (351)
T PRK01688        286 ----PCVEQVFDSETNYILARFT------ASSAVFKSLWDQGIILRDQNKQPGLSNCLRITIG---TREECQRVIDAL  350 (351)
T ss_pred             ----CCCCeECCCCCcEEEEEcC------CHHHHHHHHHHCCeEEEECCCcCCCCCeEEEeCC---CHHHHHHHHHhh
Confidence                1121233456777777654      3578999999999999854     2579999944   689999998876

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=99.82  E-value=2.9e-18  Score=156.92  Aligned_cols=213  Identities=16%  Similarity=0.162  Sum_probs=152.0

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |++.+++.++   +++++++++.+++++|.+.+    +++|.++|++||+++++|++|+. +.  ..+....+  .+|++
T Consensus       148 ~~~~l~~~i~---~~~~lv~~~~~~~~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~~-g~--~~~~~~~~--~~d~~  215 (403)
T TIGR01979       148 DLDDLEKLLT---EKTKLVAITHVSNVLGTVNP----VEEIAKLAHQVGAKVLVDGAQAV-PH--MPVDVQAL--DCDFY  215 (403)
T ss_pred             CHHHHHHHhc---cCCeEEEEEcccccccccCC----HHHHHHHHHHcCCEEEEEchhhc-Cc--cccCcccc--CCCEE
Confidence            6899998887   57899999999999999988    99999999999999999999972 11  11222323  45554


Q ss_pred             --EecccccCCcccceeeEeCHHHHhhcCCCCccC---------------------CCCCCHHHHHHHHHHHHHHhh---
Q 021893          126 --ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS---------------------TFGGNPLASAVAIASLDVIRD---  179 (306)
Q Consensus       126 --s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~aa~~al~~~~~---  179 (306)
                        +++|.+| .. ++|++++++++++.+.+...+.                     ..+.+...+.++.++++.+.+   
T Consensus       216 ~~s~~K~~g-p~-G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~  293 (403)
T TIGR01979       216 VFSGHKMYG-PT-GIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGL  293 (403)
T ss_pred             EEecccccC-CC-CceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCH
Confidence              7779764 44 6788999988877765321110                     113455667777788877755   


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE----EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC------
Q 021893          180 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR----GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------  249 (306)
Q Consensus       180 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------  249 (306)
                      +.+.++..++.+++++.|+++.    +.....+    ..+.++.+.++.    .+..++.+.|.++||.++++.      
T Consensus       294 ~~~~~~~~~l~~~l~~~l~~~~----g~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~L~~~gI~v~~g~~~~~~~  365 (403)
T TIGR01979       294 ENIEAHEHELTAYALERLGEIP----GLRIYGPRDAEDRGGIISFNVEG----VHPHDVGTILDEEGIAVRSGHHCAQPL  365 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCC----CEEEeCCCCccccCceEEEEeCC----cCHHHHHHHHhhCCEEEcchhhhhHHH
Confidence            3456777777777777776642    1211111    235666676653    346678899999999987532      


Q ss_pred             ------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          250 ------DTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       250 ------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                            .+++|++++.+++++|++++++.|+++++ .+
T Consensus       366 ~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~-~~  402 (403)
T TIGR01979       366 MRRFGVPATCRASFYIYNTEEDIDALVEALKKVRK-FF  402 (403)
T ss_pred             HHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHH-Hh
Confidence                  57899999999999999999999998877 54

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=99.82  E-value=1.1e-18  Score=156.97  Aligned_cols=210  Identities=17%  Similarity=0.181  Sum_probs=142.8

Q ss_pred             HHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-c-cccCCCCCcEEE
Q 021893           49 ALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-A-SDWEEVRPDMVI  126 (306)
Q Consensus        49 ~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~-~~~~~~~~d~~s  126 (306)
                      ++++.+.   +++++++++.++|++|. ..+++.+++|.++|+++++++|+||+|.+|...+..+ + ....+....+.|
T Consensus       134 ~~~~~~~---~~~k~v~l~~p~NPTG~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S  209 (356)
T PRK08056        134 AILEALT---PDLDCLFLCTPNNPTGL-LPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRS  209 (356)
T ss_pred             HHHHhcc---CCCCEEEEeCCcCCCCC-CCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEe
Confidence            4444454   57888889889999997 5689999999999999999999999999875444211 1 122222233459


Q ss_pred             eccccc-CCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhh
Q 021893          127 LGKALG-GGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQ  203 (306)
Q Consensus       127 ~sK~~~-~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~  203 (306)
                      +||.++ +|+ |+||+++ ++++++.+...  ...+..+.+++.++..+++.-. ..+..+.++++++.+.+.|+.+   
T Consensus       210 ~SK~~~~~G~-RiG~~v~~~~~~~~~l~~~--~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~---  283 (356)
T PRK08056        210 LTKFYAIPGL-RLGYLVNSDDAAVARMRRQ--QMPWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCAL---  283 (356)
T ss_pred             chhhccCcch-hheeeecCCHHHHHHHHHh--CCCCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence            999999 999 9999998 46777777642  2345556666666666553110 1223444555555555555543   


Q ss_pred             CCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          204 FPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       204 ~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                       ++.. ..+..|.++|+.++.     +..++++.|+++||.+.++.      .+++|++.   .+.++.+.+++.|++++
T Consensus       284 -~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~---~~~~~~~~l~~~l~~~~  353 (356)
T PRK08056        284 -PLLT-VWPGRANYLFLRCER-----PDIDLQRALLTQRILIRSCANYPGLDSRYYRVAI---RSAAENERLLAALRNVL  353 (356)
T ss_pred             -CCcE-EcCCCCcEEEEEcCC-----ChHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEE---cCHHHHHHHHHHHHHHH
Confidence             2222 224467788887753     24679999999999988752      36999994   36788899999988776


Q ss_pred             h
Q 021893          278 E  278 (306)
Q Consensus       278 ~  278 (306)
                      +
T Consensus       354 ~  354 (356)
T PRK08056        354 T  354 (356)
T ss_pred             c
Confidence            5

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.82  E-value=1.5e-18  Score=157.26  Aligned_cols=208  Identities=18%  Similarity=0.233  Sum_probs=147.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |++++++.+.   +++++|++..+++++|.+.+    +++|.++|+++|++|++|++|+. +..  .  .+.....+|++
T Consensus       128 d~~~l~~~l~---~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~li~D~a~~~-~~~--~--~~~~~~~~d~~  195 (373)
T cd06453         128 DLEALEKLLT---ERTKLVAVTHVSNVLGTINP----VKEIGEIAHEAGVPVLVDGAQSA-GHM--P--VDVQDLGCDFL  195 (373)
T ss_pred             CHHHHHHHhc---CCceEEEEeCcccccCCcCC----HHHHHHHHHHcCCEEEEEhhhhc-Cce--e--eeccccCCCEE
Confidence            7899999987   47899999999999998888    99999999999999999999972 111  1  22223456888


Q ss_pred             Eec--ccccCCcccceeeEeCHHHHhhcCCCCcc---------------------CCCCCCHHHHHHHHHHHHHHhhcc-
Q 021893          126 ILG--KALGGGVIPVSAVLADKEVMLCIQPGEHG---------------------STFGGNPLASAVAIASLDVIRDEK-  181 (306)
Q Consensus       126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~aa~~al~~~~~~~-  181 (306)
                      ++|  |.+++ . ++|++++++++++.+.+....                     ...+.+..++.+..++++.+...+ 
T Consensus       196 ~~s~~K~~~~-~-g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~  273 (373)
T cd06453         196 AFSGHKMLGP-T-GIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGM  273 (373)
T ss_pred             EeccccccCC-C-CcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCH
Confidence            777  99987 6 889999999988877653211                     011345556666777788776543 


Q ss_pred             --HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----------
Q 021893          182 --LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-----------  248 (306)
Q Consensus       182 --~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----------  248 (306)
                        ..++.+++.+++++.|++... + .........+.++++.++.    .+..++.+.|.++||.++++           
T Consensus       274 ~~~~~~~~~~~~~l~~~l~~~~~-~-~~~~~~~~~~~~~~~~~~~----~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~  347 (373)
T cd06453         274 EAIAAHEHELTAYALERLSEIPG-V-RVYGDAEDRAGVVSFNLEG----IHPHDVATILDQYGIAVRAGHHCAQPLMRRL  347 (373)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCC-e-EEeCCccccCCeEEEEECC----cCHHHHHHHHHHCCEEeccCccchhHHHHHh
Confidence              345555566666666655311 0 0111112245667776652    45678999999999998753           


Q ss_pred             -CCCEEEEeCCCCCCHHHHHHHHHHH
Q 021893          249 -HDTIVRLTPPLSISSNELQEGSKAL  273 (306)
Q Consensus       249 -~~~~lRi~~~~~~t~~~i~~~~~~l  273 (306)
                       ..+++|++++..+|++|++++++.|
T Consensus       348 ~~~~~iRis~~~~~t~~di~~~~~~l  373 (373)
T cd06453         348 GVPGTVRASFGLYNTEEEIDALVEAL  373 (373)
T ss_pred             CCCCeEEEEecCCCCHHHHHHHHhhC
Confidence             2578999999999999999998864

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]

Probab=99.81  E-value=9.6e-18  Score=146.12  Aligned_cols=273  Identities=16%  Similarity=0.138  Sum_probs=184.9

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCC---------CCccccc--CC----CHHHHHHHHHhcC------CcEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLL---------PGHLKVD--FG----DITALEKIFKESG------DQIA   62 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~--~~----d~~~le~~i~~~~------~~~~   62 (306)
                      .|++-+|+.||...+...+.+..+..-..+.-+         .|+.++|  .+    ++|.|++.+..+.      ++..
T Consensus       126 diiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~~~p~  205 (472)
T KOG0634|consen  126 DIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKIIPVKMDQDGIDPESLEEILSNWKPGSYKKPKPH  205 (472)
T ss_pred             eEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEEeccccCCCCCHHHHHHHHhcCCcccccCCCCe
Confidence            678888999998777666665433221111111         2233333  32    7999999999864      3467


Q ss_pred             EEEEcc-ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccc-----------------------ccccccccC
Q 021893           63 GFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS-----------------------GRMLASDWE  118 (306)
Q Consensus        63 ~v~v~~-~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~-----------------------g~~~~~~~~  118 (306)
                      ++++-| .+|+||.. .+.|.-++|.++|++||+++|.||.|--+...                       ..+.+.+..
T Consensus       206 vlYTIPTgqNPTG~t-ls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtd  284 (472)
T KOG0634|consen  206 VLYTIPTGQNPTGNT-LSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTD  284 (472)
T ss_pred             EEEeCcCCCCCCCCc-cCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCccccccc
Confidence            777777 58888865 58999999999999999999999999522111                       111222334


Q ss_pred             CCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Q 021893          119 EVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLF  198 (306)
Q Consensus       119 ~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~  198 (306)
                      |.+..+-||||-+++|. |+||+.+++.+++.........+-.++.+.+...-+.++.+..+++.+.+++++.....+-+
T Consensus       285 GrVIr~dSFSKiiaPGl-RlG~it~~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn  363 (472)
T KOG0634|consen  285 GRVIRNDSFSKIIAPGL-RLGWITGNSLFLKRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRN  363 (472)
T ss_pred             ccEEeccchhhhhcCcc-eeEEeecCHHHHHHHhhhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44445569999999999 99999999988888766555566666777777777777777776555555554444433322


Q ss_pred             H----HHhhCCCc--eeeEEEeeeEEEEEEe-------cCCChhhHHHHHHHHHHCCceeccC----------CCC-EEE
Q 021893          199 K----IQQQFPNY--VKEVRGRGLFNAVEFD-------KTALPVSAYDICLKMKERGILAKPT----------HDT-IVR  254 (306)
Q Consensus       199 ~----~~~~~~~~--~~~~~~~g~~~~i~~~-------~~~~~~~~~~~~~~l~~~Gi~~~~~----------~~~-~lR  254 (306)
                      .    +....|..  ..-++..|+++|+.++       +. .++..+.+...+.++||.+.++          ... ++|
T Consensus       364 ~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~-i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffR  442 (472)
T KOG0634|consen  364 ALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKS-INQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFR  442 (472)
T ss_pred             HHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccc-hHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEE
Confidence            2    22333322  3456679999999996       21 1223445667778889988764          133 899


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          255 LTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       255 i~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ++.++. +.++++++++||..+++ +.
T Consensus       443 ls~a~a-~~e~l~~g~~rf~~~ik-e~  467 (472)
T KOG0634|consen  443 LSIAFA-EPEKLDEGIERFGSVIK-EH  467 (472)
T ss_pred             EEeecC-CHHHHHHHHHHHHHHHH-HH
Confidence            997644 67799999999999988 63

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=99.81  E-value=5.6e-18  Score=154.71  Aligned_cols=205  Identities=14%  Similarity=0.142  Sum_probs=140.8

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |++.+++.++   +++++|+++.++|++|.+.+    +++|.++|++||+++++|++|.. +  ...+....  ..+|++
T Consensus       145 ~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~~-~--~~~~~~~~--~~~d~~  212 (397)
T TIGR01976       145 HPDDLASLLS---PRTRLVAVTAASNTLGSIVD----LAAITELVHAAGALVVVDAVHYA-P--HGLIDVQA--TGADFL  212 (397)
T ss_pred             CHHHHHHhcC---CCceEEEEeCCCCCCCccCC----HHHHHHHHHHcCCEEEEehhhhc-c--ccCCCHHH--cCCCEE
Confidence            6899999887   57899999999999999988    99999999999999999999961 1  11222222  345544


Q ss_pred             --EecccccCCcccceeeEeCHHHHhhcCCCCccCC----------CCCCHHHHHHHHHHHHHHhhcc------------
Q 021893          126 --ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGST----------FGGNPLASAVAIASLDVIRDEK------------  181 (306)
Q Consensus       126 --s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~aa~~al~~~~~~~------------  181 (306)
                        |++|.+  |. ++|++++++++++.+.+......          .+.+...+++..++++.+.+.+            
T Consensus       213 ~~s~~K~~--g~-~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~  289 (397)
T TIGR01976       213 TCSAYKFF--GP-HMGILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLV  289 (397)
T ss_pred             EEechhhc--CC-ceEEEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhh
Confidence              777987  45 78999999998887765321111          1334455666667777664321            


Q ss_pred             -----HHHHHHHHHHHHHHHHHHHHhhCCCcee-e---EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----
Q 021893          182 -----LAERSAHLGEELRQHLFKIQQQFPNYVK-E---VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----  248 (306)
Q Consensus       182 -----~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~---~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----  248 (306)
                           ..++..++.+++++.|+++.    +... .   ....+.++.+.+.    +.+..++.+.|.++||.++.+    
T Consensus       290 ~~~~~~~~~~~~l~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~L~~~gI~v~~~~~~~  361 (397)
T TIGR01976       290 ASFQAIDAYENRLAEYLLVGLSDLP----GVTLYGVARLAARVPTVSFTVH----GLPPQRVVRRLADQGIDAWAGHFYA  361 (397)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCC----CEEEeCCCCccCCCceEEEEeC----CcCHHHHHHHHHHCCeEEEeCccch
Confidence                 23444555566666555532    1111 1   1123445555544    245678999999999999854    


Q ss_pred             -----------CCCEEEEeCCCCCCHHHHHHHHHHH
Q 021893          249 -----------HDTIVRLTPPLSISSNELQEGSKAL  273 (306)
Q Consensus       249 -----------~~~~lRi~~~~~~t~~~i~~~~~~l  273 (306)
                                 ..+++|++++.++|++|++.+++.|
T Consensus       362 ~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l  397 (397)
T TIGR01976       362 VRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL  397 (397)
T ss_pred             HHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence                       2468999999999999999999864

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>PRK08354 putative aminotransferase; Provisional

Probab=99.81  E-value=2.7e-18  Score=151.65  Aligned_cols=238  Identities=16%  Similarity=0.100  Sum_probs=146.4

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCCCHHHHHHHHHhcCCcEEEEEEccccCC
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGE   72 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~   72 (306)
                      .|++.+|+.++-...+.... +....-...|.++.           +..+ ..|++.+++.++    ++++++++.++|+
T Consensus        56 ~I~vt~G~~~al~~~~~~~~-~gd~vlv~~P~y~~~~~~~~~~g~~~~~~-~~d~~~l~~~~~----~~~~vi~~~P~NP  129 (311)
T PRK08354         56 PIVITAGITEALYLIGILAL-RDRKVIIPRHTYGEYERVARFFAARIIKG-PNDPEKLEELVE----RNSVVFFCNPNNP  129 (311)
T ss_pred             CEEECCCHHHHHHHHHHhhC-CCCeEEEeCCCcHHHHHHHHHcCCEEeec-CCCHHHHHHhhc----CCCEEEEecCCCC
Confidence            57778888877544433222 22222222344433           1112 247889988876    2334555555788


Q ss_pred             CCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccceeeEeCHHHHhhc
Q 021893           73 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCI  151 (306)
Q Consensus        73 ~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~  151 (306)
                      +|. +.+.+.+++|.++|+++|+++|+||+|.+|...+...  + .+....+-||||.++ +|+ |+||+++.   .+.+
T Consensus       130 TG~-~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~--~-~~~vi~~~S~SK~~~l~Gl-RiG~~v~~---~~~l  201 (311)
T PRK08354        130 DGK-FYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESP--E-GENIIKLRTFTKSYGLPGI-RVGYVKGF---EEAF  201 (311)
T ss_pred             CCC-ccCHHHHHHHHHHhhhcCcEEEEeCcchhcccccccc--C-CCcEEEEeccHhhcCCccc-eeeeeeeh---HHHH
Confidence            986 5689999999999999999999999999875443221  1 222334459999999 999 99999883   3334


Q ss_pred             CCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhH
Q 021893          152 QPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSA  231 (306)
Q Consensus       152 ~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~  231 (306)
                      +...  ..+..+..++.++...++    +. .+++++..+.+++..+.+....     ..++.|.++++.+.      +.
T Consensus       202 ~~~~--~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~l~~~l-----~~~~~~~~~~~~~~------~~  263 (311)
T PRK08354        202 RSVR--MPWSIGSTGYAFLEFLIE----DD-FEHLRKTMPLIWREKERFEKAL-----YVKSDANFFIKDVG------DA  263 (311)
T ss_pred             HHcC--CCccCCHHHHHHHHHHHH----hH-HHHHHHHHHHHHHHHHHHHHhc-----CCCCCCcEEEEECC------CH
Confidence            3322  233344455444444333    11 2444455555555555543222     12344555555443      35


Q ss_pred             HHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          232 YDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       232 ~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      .++++.|.++||.+.|+.    ++++|++.   ...++.+++++.|+++
T Consensus       264 ~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~---~~~~~~~~l~~al~~~  309 (311)
T PRK08354        264 EKFVEFLKRNGILVRDCTSFGLPGYIRFSV---RDREENEKLIRALREW  309 (311)
T ss_pred             HHHHHHHHHCCeEEEecccCCCCCeEEEEe---CCHHHHHHHHHHHHHh
Confidence            679999999999999863    48999983   3556677777777654

>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]

Probab=99.80  E-value=4.5e-18  Score=141.19  Aligned_cols=259  Identities=18%  Similarity=0.238  Sum_probs=176.6

Q ss_pred             eEEEEecCCCCcccchhcccCCccc----cccCCCCCCCc---ccccCCCHHHHHHHHHh-cCCcEEEEEEccccCCCCc
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEA----IRGFGPLLPGH---LKVDFGDITALEKIFKE-SGDQIAGFLFEPIQGEAGV   75 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~d~~~le~~i~~-~~~~~~~v~v~~~~~~~G~   75 (306)
                      ..|.+-.+|.+...+.-++..+...    ..+.+.+.+|+   ....|-|+..+|..+.+ .+-+.++|....++++.|+
T Consensus       129 D~ilypscfdANag~feail~pedAvfSDeLNhASIIdGirLckry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGd  208 (417)
T KOG1359|consen  129 DTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCKRYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGD  208 (417)
T ss_pred             ceEEeccccccchHHHHHhcChhhhhhccccccchhhhhhHHHhhhccchhHHHHHHHHHhhhheEEEEEecceeccCCC
Confidence            3445555555543333333332211    23444555665   44556688888877764 3356899999999999999


Q ss_pred             ccCChhHHHHHHHHHHHcCCEEEEehhhh-c-ccccccccccccCCC--CCcEE--EecccccCCcccceeeEeCHHHHh
Q 021893           76 IIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLASDWEEV--RPDMV--ILGKALGGGVIPVSAVLADKEVML  149 (306)
Q Consensus        76 ~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~~~~~~--~~d~~--s~sK~~~~G~~~~g~~~~~~~~~~  149 (306)
                      +.|    |++|.+++++||.+|++||+|. | +|.+|.+. .+.+++  ++|++  +++|++||.  --||..+++++++
T Consensus       209 iaP----l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt-~E~~~vm~~vdiinsTLgKAlGga--~GGyttgp~~li~  281 (417)
T KOG1359|consen  209 IAP----LEEISQLAKKYGALLFIDECHATGFFGETGRGT-AEEFGVMGDVDIINSTLGKALGGA--SGGYTTGPKPLIS  281 (417)
T ss_pred             ccc----HHHHHHHHHhcCcEEEEeecccceeecCCCCCh-HHHhCCCCcceehhhhhhhhhcCC--CCCCccCChhHHH
Confidence            999    9999999999999999999997 5 46677655 355553  45554  899999832  1234899999888


Q ss_pred             hcCCCCccCCCC--CCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC
Q 021893          150 CIQPGEHGSTFG--GNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA  226 (306)
Q Consensus       150 ~~~~~~~~~~~~--~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~  226 (306)
                      -+++.....-|+  .++.....+.++++.+. +.....+.+++.+++++.++..+...      ....-.++++.+.+  
T Consensus       282 llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~aGftI------sg~~hPI~pv~lGd--  353 (417)
T KOG1359|consen  282 LLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAAGFTI------SGASHPICPVMLGD--  353 (417)
T ss_pred             HHHhcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcCcee------cCCCCCccceeccc--
Confidence            776543333332  23333344455565554 34467788899999999988875321      11112334555554  


Q ss_pred             ChhhHHHHHHHHHHCCceec-------cCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          227 LPVSAYDICLKMKERGILAK-------PTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       227 ~~~~~~~~~~~l~~~Gi~~~-------~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                       ...+..+++.|+++|+++.       |.+.-.+|+.++..++++||+++++++.+..+
T Consensus       354 -a~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr  411 (417)
T KOG1359|consen  354 -ARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGR  411 (417)
T ss_pred             -HHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHH
Confidence             4567889999999999876       33566899999999999999999999988776

>PLN02721 threonine aldolase

Probab=99.80  E-value=4.6e-18  Score=152.80  Aligned_cols=222  Identities=17%  Similarity=0.185  Sum_probs=142.4

Q ss_pred             CHHHHHHHHHhcC----CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccc-ccccccc--C
Q 021893           46 DITALEKIFKESG----DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG-RMLASDW--E  118 (306)
Q Consensus        46 d~~~le~~i~~~~----~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g-~~~~~~~--~  118 (306)
                      |++.+++.++++.    +++++|++++++++.|..+.+.+.+++|.++|++||+++|+||+|. ++... .......  .
T Consensus       119 d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~-~~~~~~~~~~~~~~~~  197 (353)
T PLN02721        119 DLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARI-FNASVALGVPVHRLVK  197 (353)
T ss_pred             CHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhh-hcchhhhCCCHHHHhh
Confidence            7999999998531    4688999988766544466689999999999999999999999986 21110 0111111  1


Q ss_pred             CCCCcEEEecccccCCccccee-eEeCHHHHhhcCCCCccCCCCCC--HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893          119 EVRPDMVILGKALGGGVIPVSA-VLADKEVMLCIQPGEHGSTFGGN--PLASAVAIASLDVIRDEKLAERSAHLGEELRQ  195 (306)
Q Consensus       119 ~~~~d~~s~sK~~~~G~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~  195 (306)
                      +...-++++||++++   ++|+ ++.++++++.+...........+  ....+++..+++....  ..++..++.+++.+
T Consensus       198 ~~d~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~  272 (353)
T PLN02721        198 AADSVSVCLSKGLGA---PVGSVIVGSKSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQENVP--KLEDDHKKAKLLAE  272 (353)
T ss_pred             hCCEEEEecccccCC---ceeeEEecCHHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
Confidence            222224588999873   3454 66788887765432211111111  1222233334433211  12333456667777


Q ss_pred             HHHHHHhhCCCcee-eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893          196 HLFKIQQQFPNYVK-EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALH  274 (306)
Q Consensus       196 ~L~~~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~  274 (306)
                      .|+++.    +... ..+..+.++++.++.. .......+++.|.++||.+.+...+++|++++..++++|+++++++|+
T Consensus       273 ~L~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~~~gi~v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~  347 (353)
T PLN02721        273 GLNQIK----GLRVNVAAVETNIVYFDITDG-SRITAEKLCKSLEEHGVLLMPGNSSRIRVVTHHQISDSDVQYTLSCFQ  347 (353)
T ss_pred             HHHhCC----CcEEecCCccceEEEEEccCC-ccccHHHHHHHHHhCCcEEecCCCceEEEEecCcCCHHHHHHHHHHHH
Confidence            776642    1211 1123355677777631 013567899999999999999988999999988899999999999999


Q ss_pred             HHHh
Q 021893          275 DVLE  278 (306)
Q Consensus       275 ~~l~  278 (306)
                      +++.
T Consensus       348 ~~~~  351 (353)
T PLN02721        348 QAAL  351 (353)
T ss_pred             HHhh
Confidence            8875

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=99.80  E-value=2.7e-18  Score=154.77  Aligned_cols=253  Identities=18%  Similarity=0.132  Sum_probs=152.7

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCC-------CHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFG-------DITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~-------d~~~le~~i~~~~~~~~~v   64 (306)
                      ..|++..|+.++-......+.. ....-...|.++.           ++.+|.+       +..+++++.+.. ++++++
T Consensus        75 ~~I~it~G~~~~i~~~~~~l~~-g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  152 (360)
T PRK07392         75 EWILPGNGAAELLTWAGRELAQ-LRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGL  152 (360)
T ss_pred             hhEEECCCHHHHHHHHHHHhCC-CCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEE
Confidence            3577778887776655544332 1222222344433           1222221       112344444332 357788


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc----cccCCCCCcEEEeccccc-CCcccce
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA----SDWEEVRPDMVILGKALG-GGVIPVS  139 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~----~~~~~~~~d~~s~sK~~~-~G~~~~g  139 (306)
                      +++.++|+||....    .++|.++++++++ +|+||+|.+|.+.+...+    .+..+....+.||||.++ +|+ |+|
T Consensus       153 ~l~nP~NPTG~~~~----~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~Gl-RiG  226 (360)
T PRK07392        153 LLNNPHNPTGKLWS----REAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGL-RLG  226 (360)
T ss_pred             EEeCCCCCCCCCcC----HHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCch-hee
Confidence            88888999998776    5677778888986 666999998755443211    111112223449999999 999 999


Q ss_pred             eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893          140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN  218 (306)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~  218 (306)
                      |+++++++++.+....  ..++.+.+++.++.++++... .+...+.++++++.+.+.|+.+    +++. ..++.+.++
T Consensus       227 ~~v~~~~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~-~~~~~~~fl  299 (360)
T PRK07392        227 YAIAHPDRLQRWQQWR--DPWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASL----PGLT-PLPSAANFL  299 (360)
T ss_pred             eeeCCHHHHHHHHhhC--CCCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhC----CCcE-ECCCCCCEE
Confidence            9999999988876533  346678888888887775311 1112334445555555555432    2222 234567777


Q ss_pred             EEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          219 AVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       219 ~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      |+.++.     ++.++++.++ ++||.+.|+      +++++|++.  . +.++.+.+.+.|+++++
T Consensus       300 ~~~~~~-----~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~--~-~~~~~~~l~~al~~~~~  358 (360)
T PRK07392        300 LVQSQG-----SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAV--R-TEAENQRLLEALAAILA  358 (360)
T ss_pred             EEEcCC-----CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEe--C-CHHHHHHHHHHHHHHhh
Confidence            876542     4667888765 579999876      247999993  3 34555666666665543

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.79  E-value=8.8e-18  Score=152.78  Aligned_cols=224  Identities=13%  Similarity=0.085  Sum_probs=145.1

Q ss_pred             CCHHHHHHHHHhc----CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC
Q 021893           45 GDITALEKIFKES----GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV  120 (306)
Q Consensus        45 ~d~~~le~~i~~~----~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~  120 (306)
                      .|++.+++.++++    .+++++|+++++++++|.+.+    +++|.++|++||+++++|++|+ +|.  .++....++.
T Consensus       139 ~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~----l~~I~~la~~~g~~livD~a~~-~g~--~~~~~~~~g~  211 (387)
T PRK09331        139 ITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD----AKKVAKVAHEYGIPFLLNGAYT-VGR--MPVDGKKLGA  211 (387)
T ss_pred             cCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc----HHHHHHHHHHcCCEEEEECCcc-cCC--cCCCHHHcCC
Confidence            4799999999853    246899999999999999888    9999999999999999999997 111  1222334454


Q ss_pred             CCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccC--------CCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHH
Q 021893          121 RPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS--------TFGGNPLASAVAIASLDVIRD-EKLAERSAHLGE  191 (306)
Q Consensus       121 ~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~  191 (306)
                      +..+.|++|+++++. ++|++++++++++.+.......        ..+..+....++.++++.+.+ .+..++..++.+
T Consensus       212 D~~~~s~~K~l~~~~-~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~  290 (387)
T PRK09331        212 DFIVGSGHKSMAASA-PSGVLATTEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKAR  290 (387)
T ss_pred             CEEEeeCcccccCCC-CEEEEEECHHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            445568889999877 9999999999888765431100        001122233444455554433 123444556677


Q ss_pred             HHHHHHHHH-HhhCCCceeeEEEeeeEEEEEEecC-----CChhhHHHHHHHHHHCCceecc-CCCCEEEEeCCCCCCHH
Q 021893          192 ELRQHLFKI-QQQFPNYVKEVRGRGLFNAVEFDKT-----ALPVSAYDICLKMKERGILAKP-THDTIVRLTPPLSISSN  264 (306)
Q Consensus       192 ~l~~~L~~~-~~~~~~~~~~~~~~g~~~~i~~~~~-----~~~~~~~~~~~~l~~~Gi~~~~-~~~~~lRi~~~~~~t~~  264 (306)
                      ++++.|+++ +..   ..........++.++.+..     .......++.+.|.++||...+ +.+..+|+.. ..++++
T Consensus       291 ~l~~~L~~l~g~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~i~ri~~-~g~t~~  366 (387)
T PRK09331        291 WFVDELEKIEGFK---QLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIKPGATKEFKLST-YGLTWE  366 (387)
T ss_pred             HHHHHHhcCCCEE---EeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEEccCCceEEEEEe-ccCCHH
Confidence            777777766 211   0100012233444443310     0112345799999999998544 4344566664 457999


Q ss_pred             HHHHHHHHHHHHHhhhc
Q 021893          265 ELQEGSKALHDVLELDL  281 (306)
Q Consensus       265 ~i~~~~~~l~~~l~~~~  281 (306)
                      |++.+++.|+++++ ++
T Consensus       367 di~~l~~aL~~i~~-~~  382 (387)
T PRK09331        367 QVEYVADAFKEIAE-KY  382 (387)
T ss_pred             HHHHHHHHHHHHHH-hc
Confidence            99999999999887 53

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.79  E-value=1.4e-17  Score=151.27  Aligned_cols=215  Identities=19%  Similarity=0.226  Sum_probs=148.6

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|++++++.++   +++++++++.+++++|.+.+    +++|.++|+++|+++++|++|+ +   |. ...+.....+|+
T Consensus       124 ~~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~~~~-~---g~-~~~~~~~~~~D~  191 (379)
T TIGR03402       124 LDLEELRAAIT---DDTALVSVMWANNETGTIFP----IEEIGEIAKERGALFHTDAVQA-V---GK-IPIDLKEMNIDM  191 (379)
T ss_pred             CCHHHHHHhcC---CCcEEEEEEcccCCeeeccc----HHHHHHHHHHcCCEEEEECccc-c---cc-cccCcccCCCCE
Confidence            37899999987   57899999999999999988    9999999999999999999997 2   22 123333456788


Q ss_pred             EEec--ccccCCcccceeeEeCHHHHhhcCCCCc-------cCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHH
Q 021893          125 VILG--KALGGGVIPVSAVLADKEVMLCIQPGEH-------GSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEEL  193 (306)
Q Consensus       125 ~s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l  193 (306)
                      +++|  | +.|.. ++|+++.+++..  +.+...       ....+.+..+..+..++++.+.+  ++..++.+++.+++
T Consensus       192 ~~~s~~K-~~gp~-G~g~l~v~~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l  267 (379)
T TIGR03402       192 LSLSGHK-LHGPK-GVGALYIRKGTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRL  267 (379)
T ss_pred             EEEcHHH-cCCCC-ceEEEEECCCCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            8777  9 65555 788888876642  232211       11224566777777788877654  23446666677777


Q ss_pred             HHHHHHHHhhCCCceeeEEE--e-eeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC---------------------
Q 021893          194 RQHLFKIQQQFPNYVKEVRG--R-GLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---------------------  249 (306)
Q Consensus       194 ~~~L~~~~~~~~~~~~~~~~--~-g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---------------------  249 (306)
                      ++.|.+.   .++.......  . ...+.+.+..    .+..++...|.++||.++.+.                     
T Consensus       268 ~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~  340 (379)
T TIGR03402       268 EAGLLAR---IPDARLNGDPTKRLPNTVNISFEY----IEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHT  340 (379)
T ss_pred             HHHHHhh---CCCEEEeCCCccCCCCEEEEEecC----CCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChh
Confidence            7766641   1212111111  1 1233333332    346788899989999988531                     


Q ss_pred             --CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          250 --DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       250 --~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                        .+.+|++++.++|++||+++++.|+++++ .+.+
T Consensus       341 ~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~-~~~~  375 (379)
T TIGR03402       341 AAHGSIRFSLSRYNTEEDIDYVLEVLPPIIA-RLRA  375 (379)
T ss_pred             hcCceEEEEcCCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence              36899999999999999999999999988 6543

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=99.79  E-value=1.8e-18  Score=154.32  Aligned_cols=193  Identities=14%  Similarity=0.096  Sum_probs=131.5

Q ss_pred             cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCCcEEEeccccc-CCccc
Q 021893           60 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDMVILGKALG-GGVIP  137 (306)
Q Consensus        60 ~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~d~~s~sK~~~-~G~~~  137 (306)
                      ++++++++.++|+||... +++.+++|   + +++++||+||+|.+|.. ....+ .........+.||||.++ +|+ |
T Consensus       138 ~~~~i~i~nP~NPTG~~~-s~~~l~~l---~-~~~~~ii~DE~Y~~f~~-~~~~~~~~~~~~vi~~~S~SK~~~l~Gl-R  210 (335)
T PRK14808        138 EGDVVFIPNPNNPTGHVF-EREEIERI---L-KTGAFVALDEAYYEFHG-ESYVDLLKKYENLAVIRTFSKAFSLAAQ-R  210 (335)
T ss_pred             CCCEEEEeCCCCCCCCCc-CHHHHHHH---H-hcCCEEEEECchhhhcC-CchHHHHHhCCCEEEEEechhhccCccc-c
Confidence            467888999999999766 55555555   4 58999999999998731 11111 122222333459999999 999 9


Q ss_pred             ceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893          138 VSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL  216 (306)
Q Consensus       138 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~  216 (306)
                      +||+++++++++.+....  ..++.+.+++.++..+++.... .+..+.+++.++.+.+.|++.     +.. ..+..|.
T Consensus       211 vG~~v~~~~~~~~l~~~~--~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-----g~~-~~~~~g~  282 (335)
T PRK14808        211 IGYVVSSEKFIDAYNRVR--LPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-----GYR-ITDSRGN  282 (335)
T ss_pred             eEEEEeCHHHHHHHHHhc--CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-----CCE-ECCCCCe
Confidence            999999999998886533  2455677788777777753221 222334444455555555543     121 2334678


Q ss_pred             EEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          217 FNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       217 ~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      ++|+.++.    .+..++.+.|.++||.+... .+++|+++   .+.++.+++++.|++
T Consensus       283 f~~~~l~~----~~~~~~~~~l~~~Gi~V~~~-~~~~Risi---~~~~~~~~~~~~l~~  333 (335)
T PRK14808        283 FVFIFMEK----EEKERLLEHLRAKNIAVRSF-REGVRITI---GKREENDMILKELEV  333 (335)
T ss_pred             EEEEeCCC----ccHHHHHHHHHHCCeEEEEC-CCCeEEec---CCHHHHHHHHHHHHh
Confidence            88887763    34578999999999999976 57899983   467888888888864

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=99.79  E-value=2.6e-18  Score=154.50  Aligned_cols=248  Identities=15%  Similarity=0.141  Sum_probs=153.1

Q ss_pred             eEEEEecCCCCcccchhcccCCc-cccccCCCCCCC-----------cccccC-----CCHHHHHHHHHhcCCcEEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPG-----------HLKVDF-----GDITALEKIFKESGDQIAGFLF   66 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~-----~d~~~le~~i~~~~~~~~~v~v   66 (306)
                      .|++.+|+-++-...+.....+. +..-...|.++.           +..+|.     .|++.+++ +    +++++|++
T Consensus        79 ~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l~~-~----~~~~li~i  153 (354)
T PRK04635         79 QILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYIEQ-L----DGAKLVFI  153 (354)
T ss_pred             HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHh-c----cCCCEEEE
Confidence            46677777776665555554332 212222233332           122222     25666652 2    36889999


Q ss_pred             ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccCCCCCcEEEeccccc-CCcccceeeEeC
Q 021893           67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEEVRPDMVILGKALG-GGVIPVSAVLAD  144 (306)
Q Consensus        67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~~~~~d~~s~sK~~~-~G~~~~g~~~~~  144 (306)
                      +.++|++|.+. +.+.+++|.+.|+  +++||+||+|.+|......... ....-...+-||||.++ +|+ |+||++++
T Consensus       154 ~nP~NPTG~~~-~~~~l~~l~~~~~--~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~Gl-RlG~~i~~  229 (354)
T PRK04635        154 CNPNNPTGTVI-DRADIEQLIEMTP--DAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGA-RCGFTLAN  229 (354)
T ss_pred             eCCCCCCCccC-CHHHHHHHHHhCC--CcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHH-HHhhhhCC
Confidence            99999999776 5666666666654  5999999999877422111111 11111122449999998 999 99999999


Q ss_pred             HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893          145 KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE  221 (306)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~  221 (306)
                      +++++.+....  ..++.+.+.+.++.++++....   ++..+.+++.++.+.+.|++..    .. ...+..|.++++.
T Consensus       230 ~~~~~~l~~~~--~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~----~~-~~~~~~g~f~~~~  302 (354)
T PRK04635        230 EELIEILMRVI--APYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYG----GA-KVLEGNGNYVLAK  302 (354)
T ss_pred             HHHHHHHHhhc--CCCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCC----Cc-eECCCCCcEEEEE
Confidence            99998876422  2455566666666666643111   1123344555566666666541    11 1233456777776


Q ss_pred             EecCCChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          222 FDKTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       222 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      ++      +..++.+.|.++||.+...    .++++|++.   .+.++++.++++|++.
T Consensus       303 ~~------~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~---~~~e~~~~l~~al~~~  352 (354)
T PRK04635        303 FD------DVDAVFKALWDAGIVARAYKDPRLANCIRFSF---SNRAETDKLIGLIRNQ  352 (354)
T ss_pred             CC------CHHHHHHHHHHCCEEEEECCCCCCCCeEEEEe---CCHHHHHHHHHHHHHh
Confidence            64      2457888999999998754    257999993   4789999999988764

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.78  E-value=4.9e-17  Score=143.61  Aligned_cols=261  Identities=17%  Similarity=0.173  Sum_probs=187.2

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.||+++.+|..|.-++=+.-...........      ..-...|++++++.|+++ +.+++|.+.+...+||.+.|   
T Consensus        80 gdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~------~wg~~v~p~~v~~~L~~~-~~~~~V~~vH~ETSTGvlnp---  149 (383)
T COG0075          80 GDKVLVVVNGKFGERFAEIAERYGAEVVVLEV------EWGEAVDPEEVEEALDKD-PDIKAVAVVHNETSTGVLNP---  149 (383)
T ss_pred             CCeEEEEeCChHHHHHHHHHHHhCCceEEEeC------CCCCCCCHHHHHHHHhcC-CCccEEEEEeccCcccccCc---
Confidence            35777777777776544332222111111100      111234899999999965 56889999999999999999   


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCC------
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE------  155 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~------  155 (306)
                       +++|+++|++||.++|+|.+-+   ..|..+..+.|+++.-+.+..|++++.. ++|++..+++.++.+....      
T Consensus       150 -l~~I~~~~k~~g~l~iVDaVsS---~Gg~~~~vd~wgiDv~itgSQK~l~~PP-Gla~v~~S~~a~e~~~~~~~~~~yl  224 (383)
T COG0075         150 -LKEIAKAAKEHGALLIVDAVSS---LGGEPLKVDEWGIDVAITGSQKALGAPP-GLAFVAVSERALEAIEERKHPSFYL  224 (383)
T ss_pred             -HHHHHHHHHHcCCEEEEEeccc---CCCcccchhhcCccEEEecCchhccCCC-ccceeEECHHHHHHHhcCCCCceee
Confidence             9999999999999999999987   2345666777877655666779999776 7789999999888775431      


Q ss_pred             ------------ccCCCCCCHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEE
Q 021893          156 ------------HGSTFGGNPLASAVAIASLDVIRDEK---LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV  220 (306)
Q Consensus       156 ------------~~~~~~~~~~~~~aa~~al~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i  220 (306)
                                  ....++++...+.+..++++.+.+++   ..++.+.+.+.+++.+++++...  +......+..+..+
T Consensus       225 DL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~--~~~~~~~s~tvta~  302 (383)
T COG0075         225 DLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLEL--FADPERRSPTVTAI  302 (383)
T ss_pred             cHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcc--ccCcccCCCceEEE
Confidence                        23334555667777779999988754   67888899999999999987553  22122334455666


Q ss_pred             EEecCCChhhHHHHHHHHHHC-CceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          221 EFDKTALPVSAYDICLKMKER-GILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       221 ~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      ..+.   +.+..++...++++ |+.+.++    .+..+||..+...+..++..++.+|..++. ++..
T Consensus       303 ~~P~---g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~-~~g~  366 (383)
T COG0075         303 KVPE---GVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALR-ELGV  366 (383)
T ss_pred             ECCC---CCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHH-HcCC
Confidence            6665   34444444466655 8888875    357999999999999999999999999999 7654

>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]

Probab=99.78  E-value=1.9e-17  Score=142.05  Aligned_cols=263  Identities=16%  Similarity=0.215  Sum_probs=170.3

Q ss_pred             ceEEEEecCCCCcccchhcccCCccc----cccCCCCCCC-----ccccc-C-----C----CHHHHHHHHHhcCCcEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEA----IRGFGPLLPG-----HLKVD-F-----G----DITALEKIFKESGDQIAG   63 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~----~~~~~~~~~~-----~~~~~-~-----~----d~~~le~~i~~~~~~~~~   63 (306)
                      +.|+...|+-|+--++..+++.+...    +.+| |+|..     -..++ |     .    |++.+|++++   ++|.+
T Consensus       127 ~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGf-p~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D---ENT~A  202 (447)
T KOG0259|consen  127 DDVVLTSGCSQAIELAISSLANPGANILLPRPGF-PLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD---ENTVA  202 (447)
T ss_pred             CceEEeccchHHHHHHHHHhcCCCCceecCCCCC-chHHHhhhhcCceeEeecccCcccceechHHHHHhhc---cCeeE
Confidence            56888999999988888888875433    2333 33322     11111 1     1    7999999998   57888


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccccC-CCCCcEE--Eeccccc-CCcccc
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWE-EVRPDMV--ILGKALG-GGVIPV  138 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~~-~~~~d~~--s~sK~~~-~G~~~~  138 (306)
                      ++|.+++|+.|.+ .+.+=|++|.++|+++|+++|.||+|..+.+.+..| +...+ ...|.+.  ++||++- +|| |+
T Consensus       203 ivviNP~NPcGnV-ys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGW-Rl  280 (447)
T KOG0259|consen  203 IVVINPNNPCGNV-YSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGW-RL  280 (447)
T ss_pred             EEEeCCCCCCccc-ccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCc-ee
Confidence            8888888888865 589999999999999999999999999876666544 23332 3344433  7789876 999 99


Q ss_pred             eeeEeCHH--HH------hhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCc
Q 021893          139 SAVLADKE--VM------LCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNY  207 (306)
Q Consensus       139 g~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~  207 (306)
                      ||++....  ++      +.+....+ .+..++++-++|.-.-|+.-.+   +.-...++.+.+...++|+++.    ..
T Consensus       281 GWi~~hD~~gvf~~~~~~q~~~~~~~-~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP----~l  355 (447)
T KOG0259|consen  281 GWIALHDPRGVFRDTKVVQGIKNFLD-IIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIP----CL  355 (447)
T ss_pred             eeEEEecccccccchHHHHHHHHHHh-ccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCC----Cc
Confidence            99988542  22      12211111 1222344444444443333222   1234556666677777777652    22


Q ss_pred             eeeEEE-eeeEEEEEEecC--CChhhHHHHHHHHH-HCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          208 VKEVRG-RGLFNAVEFDKT--ALPVSAYDICLKMK-ERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       208 ~~~~~~-~g~~~~i~~~~~--~~~~~~~~~~~~l~-~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .-.+.. ..+++++.+.-.  ..-.+..+|++.|. |+.+++-|+    .++|+|++  +....+.++++++||++...
T Consensus       356 ~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~--i~~~~~~leea~~Rik~Fc~  432 (447)
T KOG0259|consen  356 TCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIV--ITVEEEMLEEAFSRIKEFCD  432 (447)
T ss_pred             ccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEE--EccChHHHHHHHHHHHHHHH
Confidence            213333 333334433321  11234567888885 668888886    48999999  67888999999999999988

>PRK02948 cysteine desulfurase; Provisional

Probab=99.77  E-value=4.4e-17  Score=148.06  Aligned_cols=218  Identities=17%  Similarity=0.157  Sum_probs=150.4

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|++++++.++   +++++|++++++|++|.+.+    +++|.++|+++|+++++|++|+ ++..  .+....++.+.-+
T Consensus       126 ~d~~~l~~~l~---~~~~lv~~~~~~n~tG~~~~----~~~I~~l~~~~~~~vivD~~~~-~g~~--~~~~~~~~~d~~~  195 (381)
T PRK02948        126 IRLVDLERAIT---PDTVLASIQHANSEIGTIQP----IAEIGALLKKYNVLFHSDCVQT-FGKL--PIDVFEMGIDSLS  195 (381)
T ss_pred             CCHHHHHHhcC---CCCEEEEEECCcCCcEeehh----HHHHHHHHHHcCCEEEEEChhh-cccc--ccCcccCCCCEEE
Confidence            47899998886   46889999999999999988    9999999999999999998886 3322  2223334433334


Q ss_pred             EEecccccCCcccceeeEeCHHH-HhhcCCC----CccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHH
Q 021893          125 VILGKALGGGVIPVSAVLADKEV-MLCIQPG----EHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHL  197 (306)
Q Consensus       125 ~s~sK~~~~G~~~~g~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L  197 (306)
                      .+++|.+| .. ++|+++.++++ +....+.    .....++.+.+++.++.++++...+  ++..++++++++++++.|
T Consensus       196 ~s~~K~~g-p~-G~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L  273 (381)
T PRK02948        196 VSAHKIYG-PK-GVGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQI  273 (381)
T ss_pred             ecHHhcCC-CC-cEEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            47789765 33 56888887764 2222110    1112346678888888888877633  445678888888888888


Q ss_pred             HHHHhhCCCceeeEEEe----eeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----------------------C
Q 021893          198 FKIQQQFPNYVKEVRGR----GLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----------------------D  250 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~~----g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----------------------~  250 (306)
                      +++...    +......    ..++.+.++    ..+..++...|.++||.++.+.                       .
T Consensus       274 ~~~~~~----v~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~  345 (381)
T PRK02948        274 QTLPLP----IEVEGHSTSCLPHIIGVTIK----GIEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAK  345 (381)
T ss_pred             hcCCCC----EEEeCCCccCcCCEEEEEeC----CCCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhC
Confidence            776311    1111101    122333333    2346778888889999998531                       3


Q ss_pred             CEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          251 TIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       251 ~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      +++|++++..+|++|++.+++.|+++++ .+.+
T Consensus       346 ~~lRis~~~~~t~~di~~l~~~l~~~~~-~~~~  377 (381)
T PRK02948        346 QFVRFSFGQQTTKDQIDTTIHALETIGN-QFYR  377 (381)
T ss_pred             ceEEEEcCCCCCHHHHHHHHHHHHHHHH-HHhc
Confidence            6899999999999999999999999988 6543

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.76  E-value=2.2e-17  Score=149.45  Aligned_cols=202  Identities=21%  Similarity=0.344  Sum_probs=150.2

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |++++++.|+   +++++|++.++.+.+|.+.+    +++|.++|+++|+++++|.+|+    .|.. .++...+.+|++
T Consensus       128 ~~~~~~~~l~---~~~~lv~~~~~~~~tG~~~p----i~~I~~~~~~~~~~~~vD~~~~----~g~~-~id~~~~~~D~~  195 (371)
T PF00266_consen  128 DLEDLEEALN---PDTRLVSISHVENSTGVRNP----IEEIAKLAHEYGALLVVDAAQS----AGCV-PIDLDELGADFL  195 (371)
T ss_dssp             SHHHHHHHHH---TTESEEEEESBETTTTBBSS----HHHHHHHHHHTTSEEEEE-TTT----TTTS-S--TTTTTESEE
T ss_pred             hhhhhhhhhc---cccceEEeecccccccEEee----eceehhhhhccCCceeEechhc----cccc-ccccccccccee
Confidence            6999999997   68999999999999999999    9999999999999999999998    2221 133334567776


Q ss_pred             Eec--ccccCCcccceeeEeCHHHHhhcCCCCccCC------------------C---CCCHHHHHHHHHHHHHHhh---
Q 021893          126 ILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGST------------------F---GGNPLASAVAIASLDVIRD---  179 (306)
Q Consensus       126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~------------------~---~~~~~~~~aa~~al~~~~~---  179 (306)
                      ++|  | ++|+. ++|+++++++.++.+++......                  +   +.+.....++..+++.+.+   
T Consensus       196 ~~s~~K-l~gp~-G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~  273 (371)
T PF00266_consen  196 VFSSHK-LGGPP-GLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGI  273 (371)
T ss_dssp             EEESTS-TTSSS-TEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHH
T ss_pred             eecccc-cCCCC-chhhheehhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhcccc
Confidence            554  9 99888 89999999999988855422111                  1   3466667777788888854   


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhCCCcee----eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC------
Q 021893          180 EKLAERSAHLGEELRQHLFKIQQQFPNYVK----EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------  249 (306)
Q Consensus       180 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------  249 (306)
                      +++.++..++.+++++.|+++..    ...    .....+.++.+.++    ..+..++.+.|.++||.++.+.      
T Consensus       274 ~~i~~~~~~l~~~~~~~l~~~~~----~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~L~~~~I~~~~G~~~~~~~  345 (371)
T PF00266_consen  274 ERIRERIRELAEYLREALEELPG----IEVLGPDDEPRRPSIVSFNLP----GSDADDVVKYLEERGIAVSTGSACAGPS  345 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTT----EEESSSSCGGBGTTEEEEEET----TSSHHHHHHHHHHHTEEEEESTTTCHHH
T ss_pred             ccchhhhhhHHHHHHhhhhcCCc----eeEeeecccccccceEEEeec----CCCHHHHHHHHhhcCEEEeccCcccHHH
Confidence            44667777888888888877532    221    12345666777775    4567899999999999988731      


Q ss_pred             ------CCEEEEeCCCCCCHHHHHHH
Q 021893          250 ------DTIVRLTPPLSISSNELQEG  269 (306)
Q Consensus       250 ------~~~lRi~~~~~~t~~~i~~~  269 (306)
                            .+.+|++++.++|++||+++
T Consensus       346 ~~~~~~~~~iRvS~~~~nt~~dv~~l  371 (371)
T PF00266_consen  346 LDILGMGGVIRVSLHYYNTEEDVDRL  371 (371)
T ss_dssp             HHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred             HHHhCCCCEEEEeccCCCCHHHHhhC
Confidence                  38999999999999999875

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.76  E-value=1.2e-16  Score=144.69  Aligned_cols=212  Identities=16%  Similarity=0.158  Sum_probs=143.9

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccc----cccccccccCCCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR----SGRMLASDWEEVR  121 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~----~g~~~~~~~~~~~  121 (306)
                      |++.|++.|++   +++.+++..+++++|.+.+    +++|.++|+++|+++++|++|+++..    .+..+....  ..
T Consensus       140 d~~~l~~~i~~---~~~~vi~~~~~~~tG~~~~----l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~--~~  210 (371)
T PRK13520        140 DVKAVEDLIDD---NTIGIVGIAGTTELGQVDP----IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSL--PG  210 (371)
T ss_pred             CHHHHHHHHhh---CCEEEEEEcCCcCCcccCC----HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccC--CC
Confidence            89999999984   4666666666778898888    99999999999999999999985421    111121111  24


Q ss_pred             CcEEEe--cccccCCcccceeeEe-CHHHHhhcCCCCcc----C----CCCCCHHHHHHHHHHHHHHhhc---cHHHHHH
Q 021893          122 PDMVIL--GKALGGGVIPVSAVLA-DKEVMLCIQPGEHG----S----TFGGNPLASAVAIASLDVIRDE---KLAERSA  187 (306)
Q Consensus       122 ~d~~s~--sK~~~~G~~~~g~~~~-~~~~~~~~~~~~~~----~----~~~~~~~~~~aa~~al~~~~~~---~~~~~~~  187 (306)
                      .|.+++  .|...+|. ++|+++. ++++++.+......    .    ..+.+...+.++.++++.+..+   +..++..
T Consensus       211 vd~~~~s~~K~~~a~~-~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~  289 (371)
T PRK13520        211 VDSITIDPHKMGLAPI-PAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCM  289 (371)
T ss_pred             CceEEECCccccCccC-CceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHH
Confidence            566554  37555677 8887775 56676665421100    0    0112345567777788776543   3567778


Q ss_pred             HHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-CCEEEEeCCCCCCHHHH
Q 021893          188 HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-DTIVRLTPPLSISSNEL  266 (306)
Q Consensus       188 ~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~~lRi~~~~~~t~~~i  266 (306)
                      ++.+++++.|++++     ..........++.+.++      ...++.+.|.++||.+.++. ++.+|++++..+|++|+
T Consensus       290 ~~~~~l~~~L~~~g-----~~~~~~~~~~~v~~~~~------~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi  358 (371)
T PRK13520        290 ENTRWLAEELKERG-----FEPVIEPVLNIVAFDDP------NPDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHI  358 (371)
T ss_pred             HHHHHHHHHHHhCC-----CEEecCCCceEEEEecC------CHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHH
Confidence            88888888887652     11011223334455443      36789999999999998764 56899998888999999


Q ss_pred             HHHHHHHHHHHh
Q 021893          267 QEGSKALHDVLE  278 (306)
Q Consensus       267 ~~~~~~l~~~l~  278 (306)
                      +.+++.|++.++
T Consensus       359 ~~~~~~l~~~~~  370 (371)
T PRK13520        359 ENFLEDLKEVKK  370 (371)
T ss_pred             HHHHHHHHHHhh
Confidence            999999998875

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.76  E-value=2.1e-17  Score=147.63  Aligned_cols=216  Identities=15%  Similarity=0.114  Sum_probs=139.4

Q ss_pred             CCHHHHHHHHHhcC----CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcc--cccccccccccC
Q 021893           45 GDITALEKIFKESG----DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL--ARSGRMLASDWE  118 (306)
Q Consensus        45 ~d~~~le~~i~~~~----~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~--~~~g~~~~~~~~  118 (306)
                      .|+++|+++++++.    +++++|++++++|+++ .. +.+.+++|.++|++||+++|+||+|..+  ...|..  ....
T Consensus       108 ~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~-~~-~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~--~~~~  183 (338)
T cd06502         108 LTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGT-VY-PLDELKAISALAKENGLPLHLDGARLANAAAALGVA--LKTY  183 (338)
T ss_pred             CCHHHHHHHhhccCCCcCCcceEEEEEeecCCcc-cc-CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCC--HHHH
Confidence            47999999997521    3678888888877644 43 7888999999999999999999998522  112221  1111


Q ss_pred             CCCCc--EEEecccccCCcccce-eeEeCHHHHhhcCCCC--ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893          119 EVRPD--MVILGKALGGGVIPVS-AVLADKEVMLCIQPGE--HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL  193 (306)
Q Consensus       119 ~~~~d--~~s~sK~~~~G~~~~g-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l  193 (306)
                      ....|  +.++||.++.   +.| +++.++++++.+....  ...++..+.+.++++..+++.-...+..+++.++++++
T Consensus       184 ~~~~d~~~~s~sK~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l  260 (338)
T cd06502         184 KSGVDSVSFCLSKGGGA---PVGAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRL  260 (338)
T ss_pred             HhcCCEEEEeccccCCC---ccceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence            12334  4488899972   223 4567888888776432  12333445566666666664311123456777777888


Q ss_pred             HHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH---HCCceeccCCCCEEEEeCCCCCCHHHHHHHH
Q 021893          194 RQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK---ERGILAKPTHDTIVRLTPPLSISSNELQEGS  270 (306)
Q Consensus       194 ~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~---~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~  270 (306)
                      .+.|++++..      ..+..+.++.+..+..  ......+.+.+.   ++|+.+.+.+.+++|++++..++++|+++++
T Consensus       261 ~~~L~~~~~~------~~~~~~~~~~v~~~~~--~~~~~~l~~~l~~~~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~  332 (338)
T cd06502         261 AEALEELGGL------ESEVQTNIVLLDPVEA--NAVFVELSKEAIERRGEGVLFYAWGEGGVRFVTHWDTTEEDVDELL  332 (338)
T ss_pred             HHHHHhcCCC------cccccCCeEEEecCCc--cHHHHHHHHHHHHhhhCCEEEEecCCCeEEEEeecCCCHHHHHHHH
Confidence            8888775321      1123344444444321  222334455443   6899998876689999999999999999999


Q ss_pred             HHHHH
Q 021893          271 KALHD  275 (306)
Q Consensus       271 ~~l~~  275 (306)
                      +++++
T Consensus       333 ~~l~~  337 (338)
T cd06502         333 SALKA  337 (338)
T ss_pred             HHHhc
Confidence            98864

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.75  E-value=1.4e-16  Score=144.79  Aligned_cols=213  Identities=15%  Similarity=0.211  Sum_probs=145.7

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |++.|++.++   ++++++++++++|++|.+.+    +++|.++|+++|+++++|++|+ +   |. ...+.....+|++
T Consensus       129 d~~~l~~~i~---~~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~~ivD~a~~-~---g~-~~~~~~~~~~D~~  196 (382)
T TIGR03403       129 TAEQVREAIT---EKTALVSVMWANNETGMIFP----IKEIGEICKERGVLFHTDAVQA-I---GK-IPVDVQKAGVDFL  196 (382)
T ss_pred             CHHHHHHhcc---cCCeEEEEEcccCCCccccC----HHHHHHHHHHcCCEEEEechhh-c---CC-CccCccccCCCEE
Confidence            6889998887   46889999999999999988    9999999999999999999987 2   21 1122223456777


Q ss_pred             Eec--ccccCCcccceeeEeCHHHHhhcCCCC-------ccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 021893          126 ILG--KALGGGVIPVSAVLADKEVMLCIQPGE-------HGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELR  194 (306)
Q Consensus       126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~  194 (306)
                      ++|  |.+| .. ++|+++.+++.  .+.+..       ....++.+..++.++.++++...+  +...+++++++++++
T Consensus       197 ~~s~~K~~g-p~-G~g~l~vr~~~--~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~  272 (382)
T TIGR03403       197 SFSAHKFHG-PK-GVGGLYIRKGV--ELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLE  272 (382)
T ss_pred             EEcchhhCC-CC-ceEEEEECCCC--CCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            655  9654 33 46777776553  122211       112345677788788888876654  233456666666666


Q ss_pred             HHHHHHHhhCCCceeeEE---EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----------------------
Q 021893          195 QHLFKIQQQFPNYVKEVR---GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----------------------  249 (306)
Q Consensus       195 ~~L~~~~~~~~~~~~~~~---~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----------------------  249 (306)
                      +.|+++    ++.....+   ....++.+.+.    ..+..++.+.|.++||.++.+.                      
T Consensus       273 ~~L~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~  344 (382)
T TIGR03403       273 DALLEL----PDVFVVGDREHRVPNTILISIK----GVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKEL  344 (382)
T ss_pred             HHHhcC----CCEEEECCCCCCcCCEEEEEeC----CCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHH
Confidence            666553    21211111   11334455554    3456788888989999998421                      


Q ss_pred             -CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          250 -DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       250 -~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                       .+.+|++++..+|++||+.+++.|+++++ ++..
T Consensus       345 ~~~~iR~s~~~~~t~~did~~~~~l~~~~~-~~~~  378 (382)
T TIGR03403       345 AHTAIRLSLSRFTTEEEIDYTIEVFKKAVQ-RLRA  378 (382)
T ss_pred             hCeeEEEECCCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence             26799999999999999999999999988 6554

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=99.75  E-value=3.7e-17  Score=145.99  Aligned_cols=200  Identities=17%  Similarity=0.174  Sum_probs=130.1

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~d~  124 (306)
                      |++.+++.+    +++++++++.++|++|.+.+    .++|.+++ ++++++|+||+|.+|... .... .+...-...+
T Consensus       130 d~~~l~~~~----~~~~~v~~~~P~NPtG~~~~----~~~l~~i~-~~~~~ii~De~y~~~~~~-~~~~~~~~~~~vi~l  199 (337)
T PRK03967        130 DGERIAEKA----KNASAVFICSPNNPTGNLQP----EEEILKVL-ETGKPVVLDEAYAEFSGK-SLIGLIDEYPNLILL  199 (337)
T ss_pred             CHHHHHHhc----cCCCEEEEeCCCCCCCCCCC----HHHHHHHH-hcCCEEEEECchhhhccc-chHHHHhhCCCEEEE
Confidence            677787754    35667777788999997765    56666667 479999999999987421 1111 1111112234


Q ss_pred             EEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHh
Q 021893          125 VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQ  202 (306)
Q Consensus       125 ~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~  202 (306)
                      .||||.++ +|+ |+||+++++++++.+....  ..++.+.+++.++..+++.... .+......+.++.+.+.|.+.  
T Consensus       200 ~S~SK~~~l~Gl-RiG~iv~~~~~i~~~~~~~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~--  274 (337)
T PRK03967        200 RTFSKAFGLAGI-RAGYAIANEEIIDALYRIK--PPFSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY--  274 (337)
T ss_pred             ecchHhhcchhh-hheeeecCHHHHHHHHhhc--CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC--
Confidence            49999999 999 9999999999988877543  2355677788887776653211 111122222233333333221  


Q ss_pred             hCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 021893          203 QFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT---HDTIVRLTPPLSISSNELQEGSKALHDVLEL  279 (306)
Q Consensus       203 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~  279 (306)
                             ..+..+.++|+.++          +.+.|.++||.+.+.   ..+++|++.   .+.++.+.+++.|+++.+ 
T Consensus       275 -------~~~~~~~~~~~~~~----------~~~~l~~~gi~v~~~~~~~~~~~Ri~~---~~~~~~~~l~~~l~~~~~-  333 (337)
T PRK03967        275 -------AYPSDANFLLLKLD----------AYDYLLENGIVVRKLSGRLEGHIRVTV---GKREENDEFIKALKEIKE-  333 (337)
T ss_pred             -------cCCCCCcEEEEhHH----------HHHHHHHCCEEEEeCCCCCCCeEEEec---CCHHHHHHHHHHHHHHHH-
Confidence                   23456777776431          678899999998754   357999983   367788899999988876 


Q ss_pred             hc
Q 021893          280 DL  281 (306)
Q Consensus       280 ~~  281 (306)
                      .+
T Consensus       334 ~~  335 (337)
T PRK03967        334 GY  335 (337)
T ss_pred             hc
Confidence            54

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=99.74  E-value=2e-16  Score=146.00  Aligned_cols=233  Identities=17%  Similarity=0.117  Sum_probs=152.0

Q ss_pred             CCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc----cccc---cc-cccc
Q 021893           45 GDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG----LARS---GR-MLAS  115 (306)
Q Consensus        45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g----~~~~---g~-~~~~  115 (306)
                      -|++.|++.|++++ +++++|+++.++|++|..+.+.+.+++|.++|++||++||+|+++..    |...   |. ..+.
T Consensus       161 id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si  240 (460)
T PRK13238        161 FDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSI  240 (460)
T ss_pred             cCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCH
Confidence            48999999998654 46999999999999886777899999999999999999999998852    1110   10 1111


Q ss_pred             cc----CCCCCcEEEec--ccccCCcccceeeEeC-HHHHhhcCCCC---c-cCCCCCCHHH-HHHHHHHHHHHhhccHH
Q 021893          116 DW----EEVRPDMVILG--KALGGGVIPVSAVLAD-KEVMLCIQPGE---H-GSTFGGNPLA-SAVAIASLDVIRDEKLA  183 (306)
Q Consensus       116 ~~----~~~~~d~~s~s--K~~~~G~~~~g~~~~~-~~~~~~~~~~~---~-~~~~~~~~~~-~~aa~~al~~~~~~~~~  183 (306)
                      ..    ..-..|.+++|  |...++.  .|+++.+ +++++.++...   + ..++++.... +.|+..+++...++++.
T Consensus       241 ~~i~~~~~s~~D~~~~Sg~K~g~~~~--GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~  318 (460)
T PRK13238        241 KEIAREMFSYADGLTMSAKKDAMVNI--GGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYL  318 (460)
T ss_pred             HHHhhhhcccCcEEEEecccCCCCcc--eeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHH
Confidence            00    00124555555  3222221  2456666 67888877652   2 3366665554 45555566655455556


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-----ChhhHHHHHHHHHHC-CceeccCC--------
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----LPVSAYDICLKMKER-GILAKPTH--------  249 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-----~~~~~~~~~~~l~~~-Gi~~~~~~--------  249 (306)
                      ....+.+++|.+.|++.+     .....+..|.++.+++....     ......+|+.+|+++ ||.+.|.+        
T Consensus       319 ~~~~~~~~~l~~~L~~~G-----~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~  393 (460)
T PRK13238        319 AYRIGQVEYLGEGLEEAG-----VPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDP  393 (460)
T ss_pred             HHHHHHHHHHHHHHHHCC-----CCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCC
Confidence            666667788888888853     33344566777777765311     011357788888755 99887632        


Q ss_pred             ---------CCEEEEeCCC-CCCHHHHHHHHHHHHHHHhhhcCCCC
Q 021893          250 ---------DTIVRLTPPL-SISSNELQEGSKALHDVLELDLPKMR  285 (306)
Q Consensus       250 ---------~~~lRi~~~~-~~t~~~i~~~~~~l~~~l~~~~~~~~  285 (306)
                               ...+|++.+- .-|.++++.+.++|+++.+ .-...+
T Consensus       394 ~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~-~~~~~~  438 (460)
T PRK13238        394 KTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKE-NRESIK  438 (460)
T ss_pred             CCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHH-hHhhcC
Confidence                     4789999653 3389999999999998886 433333

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.73  E-value=1.8e-16  Score=145.10  Aligned_cols=216  Identities=17%  Similarity=0.154  Sum_probs=138.7

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |++++++.+.+  +++++++++++++  |...+    +++|.++|++||+++|+|++|. |+...|... ....+.+.-+
T Consensus       149 d~~~l~~~i~~--~~~~~v~~~~~~~--~~~~~----~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~-~~~~~~dv~~  219 (402)
T cd00378         149 DYDALEKMALE--FKPKLIVAGASAY--PRPID----FKRFREIADEVGAYLLVDMAHVAGLVAGGVFP-NPLPGADVVT  219 (402)
T ss_pred             CHHHHHHHHHh--CCCCEEEecCccc--CCCcC----HHHHHHHHHhcCCEEEEEccchhhhhhcccCC-CcccCCcEEE
Confidence            89999999975  3567777655443  34455    9999999999999999999974 543333211 1111222223


Q ss_pred             EEecccccCCcccceeeEeCH-HHHhhcCCCCccCCCCC-CHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHH
Q 021893          125 VILGKALGGGVIPVSAVLADK-EVMLCIQPGEHGSTFGG-NPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFK  199 (306)
Q Consensus       125 ~s~sK~~~~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~  199 (306)
                      .|++|++ +|+ +.|++++++ ++++.+........++. +...+.++..++.....   ++..++++++.+++++.|++
T Consensus       220 ~s~sK~l-~G~-~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~  297 (402)
T cd00378         220 TTTHKTL-RGP-RGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKE  297 (402)
T ss_pred             eccccCC-CCC-CceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4888999 667 889998876 88877654322222222 22333333334443322   34566777888888888877


Q ss_pred             HHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----------CCCEEEEeCCCC----CCHHH
Q 021893          200 IQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----------HDTIVRLTPPLS----ISSNE  265 (306)
Q Consensus       200 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------~~~~lRi~~~~~----~t~~~  265 (306)
                      .+..    +...+..+.++|+.+++.  ......+.+.|.++||.+.+.          ..+.+|++++..    .+.+|
T Consensus       298 ~g~~----~~~~~~~~~~v~v~~~~~--~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~d  371 (402)
T cd00378         298 RGFK----VVSGGTDNHLVLVDLRPK--GITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEE  371 (402)
T ss_pred             CCCe----EeecCCCCeEEEEeCCcc--CCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHH
Confidence            5211    111224577788887642  224456777788889999631          346899987653    47999


Q ss_pred             HHHHHHHHHHHHh
Q 021893          266 LQEGSKALHDVLE  278 (306)
Q Consensus       266 i~~~~~~l~~~l~  278 (306)
                      ++.+++.|+++++
T Consensus       372 i~~~~~~l~~~~~  384 (402)
T cd00378         372 MEEIADFIARALK  384 (402)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999999887

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.73  E-value=2.1e-16  Score=142.55  Aligned_cols=219  Identities=12%  Similarity=0.095  Sum_probs=137.8

Q ss_pred             CHHHHHHHHHhcC----CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCC
Q 021893           46 DITALEKIFKESG----DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR  121 (306)
Q Consensus        46 d~~~le~~i~~~~----~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~  121 (306)
                      |++.++++++++.    +++++++++++++++|...+    +++|.++|+++|+++|+|++|.. +.  ..+....++.+
T Consensus       121 d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~~-g~--~~~~~~~~~~d  193 (361)
T cd06452         121 TPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD----AKKIAKVCHEYGVPLLLNGAYTV-GR--MPVSGKELGAD  193 (361)
T ss_pred             CHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc----HHHHHHHHHHcCCeEEEECCccc-CC--cCCCHHHcCCC
Confidence            7899999987532    36889999999999998877    99999999999999999999971 11  12223333444


Q ss_pred             CcEEEecccccCCcccceeeEeCHHHHhhcCCCCccC-----C---CCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHHHH
Q 021893          122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS-----T---FGGNPLASAVAIASLDVIRDE-KLAERSAHLGEE  192 (306)
Q Consensus       122 ~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~~aa~~al~~~~~~-~~~~~~~~~~~~  192 (306)
                      ..+.|++|+++++. ++|++++++++++.+.......     .   .+.....+.++.++++.+.+. +...+..++.++
T Consensus       194 ~~~~s~~K~l~~~~-~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~  272 (361)
T cd06452         194 FIVGSGHKSMAASA-PIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKARW  272 (361)
T ss_pred             EEEecCCccccCCC-CeEEEEECHHHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44568889999777 9999999999888875432110     0   011122344444555443221 112222334466


Q ss_pred             HHHHHHHHHhhCCCceee--EEEeeeEEEEEEecCC-----ChhhHHHHHHHHHHCCceecc-CCCCEEEEeCCCCCCHH
Q 021893          193 LRQHLFKIQQQFPNYVKE--VRGRGLFNAVEFDKTA-----LPVSAYDICLKMKERGILAKP-THDTIVRLTPPLSISSN  264 (306)
Q Consensus       193 l~~~L~~~~~~~~~~~~~--~~~~g~~~~i~~~~~~-----~~~~~~~~~~~l~~~Gi~~~~-~~~~~lRi~~~~~~t~~  264 (306)
                      +++.|+++.    +....  ......++.+..+...     ......++.+.|+++||.... +..+.+|++.. ..+++
T Consensus       273 l~~~L~~l~----g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~ri~~~-g~~~e  347 (361)
T cd06452         273 FVAELEKIE----GIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGIKPGLTRYFKLSTY-GLTWE  347 (361)
T ss_pred             HHHHHhcCC----CeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEEcCCCceEEEEEec-CCCHH
Confidence            666666541    11111  1223344444433100     011234699999999999654 33567899863 36999


Q ss_pred             HHHHHHHHHHHHH
Q 021893          265 ELQEGSKALHDVL  277 (306)
Q Consensus       265 ~i~~~~~~l~~~l  277 (306)
                      +++.+++.|+++.
T Consensus       348 ~~~~l~~al~~~~  360 (361)
T cd06452         348 QVEYVVDAFKEIA  360 (361)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999998664

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.73  E-value=4.6e-16  Score=141.08  Aligned_cols=210  Identities=16%  Similarity=0.161  Sum_probs=145.0

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|++++++.++   +++++++++.++|++|.+.+    +++|.++|+++|+++|+|++|+ +|..  .+....  ..+|+
T Consensus       125 ~d~~~l~~~~~---~~~~~v~~~~~~n~tG~~~~----~~~i~~l~~~~~~~livD~a~~-~g~~--~~~~~~--~~~D~  192 (376)
T TIGR01977       125 ISPERIKRAIK---TNTKLIVVSHASNVTGTILP----IEEIGELAQENGIFFILDAAQT-AGVI--PIDMTE--LAIDM  192 (376)
T ss_pred             cCHHHHHHhcC---CCCeEEEEECCCCCccccCC----HHHHHHHHHHcCCEEEEEhhhc-cCcc--CCCchh--cCCCE
Confidence            37899999886   47899999999999999988    9999999999999999999997 2111  122222  34566


Q ss_pred             E--EecccccCCcccceeeEeCHHH-HhhcCCCC----------------ccCCCCCCHHHHHHHHHHHHHHhhc---cH
Q 021893          125 V--ILGKALGGGVIPVSAVLADKEV-MLCIQPGE----------------HGSTFGGNPLASAVAIASLDVIRDE---KL  182 (306)
Q Consensus       125 ~--s~sK~~~~G~~~~g~~~~~~~~-~~~~~~~~----------------~~~~~~~~~~~~~aa~~al~~~~~~---~~  182 (306)
                      +  +..|++++.. ++|+++.+++. +..+....                .....+.+...+.+..++++++.+.   .+
T Consensus       193 ~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~  271 (376)
T TIGR01977       193 LAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANI  271 (376)
T ss_pred             EEecccccccCCC-CceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHH
Confidence            5  5559998655 66777666553 12211100                0011134566777777888888764   35


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCceee----EEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC---------
Q 021893          183 AERSAHLGEELRQHLFKIQQQFPNYVKE----VRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT---------  248 (306)
Q Consensus       183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~----~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~---------  248 (306)
                      .++..++.+++++.|++..    ++...    ....+.++++.++    +.+..++.+.|.++ ||.++.+         
T Consensus       272 ~~~~~~l~~~~~~~l~~~~----~~~~~~~~~~~~~~~~v~~~~~----~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~  343 (376)
T TIGR01977       272 AKKECMLTEKLLNGLREIN----KVKIYGPADPANRVGVVSFTVE----GIDSEEVADILDEKFDIATRTGLHCAPLAHK  343 (376)
T ss_pred             HHHHHHHHHHHHHHHhcCC----CeEEeCCCCccccCCeEEEEEC----CCCHHHHHHHHhccCCEEEEcccccchHHHH
Confidence            6677777777777776542    11111    1113556666665    24677899999988 8887653         


Q ss_pred             -----CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          249 -----HDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       249 -----~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                           ..+.||++++..+|++|++.++++|++
T Consensus       344 ~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~  375 (376)
T TIGR01977       344 TIGTFATGTIRLSLGYFNTEEEIEKLLEALSE  375 (376)
T ss_pred             HhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence                 347899999999999999999999875

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>PLN02368 alanine transaminase

Probab=99.73  E-value=1.9e-17  Score=150.73  Aligned_cols=214  Identities=10%  Similarity=0.066  Sum_probs=139.4

Q ss_pred             ceEEEEecCCCCcccchhccc-CCccccccCCCCCCC-----------ccccc-------CCCHHHHHHHHHhcC---Cc
Q 021893            3 AIIVSCCGCFHGRTLAAISMS-CDNEAIRGFGPLLPG-----------HLKVD-------FGDITALEKIFKESG---DQ   60 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~-------~~d~~~le~~i~~~~---~~   60 (306)
                      ..|++..|+.+|-..++..+. .+.+..-...|.|+.           ++.++       ..|++.|++.++...   .+
T Consensus       131 ~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~  210 (407)
T PLN02368        131 ELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGIT  210 (407)
T ss_pred             hhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCC
Confidence            368888888888766666554 333333333455544           12222       137899999997421   26


Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-cc-cccc----C-------CCCCcEEEe
Q 021893           61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-ML-ASDW----E-------EVRPDMVIL  127 (306)
Q Consensus        61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~-~~~~----~-------~~~~d~~s~  127 (306)
                      +++++++.++|+||.+ .+++.+++|.++|++||+++|+||+|.++.+.+. .+ +...    .       .....+.||
T Consensus       211 ~k~l~l~nP~NPTG~v-~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~Sf  289 (407)
T PLN02368        211 VRAMVIINPGNPTGQC-LSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTV  289 (407)
T ss_pred             eEEEEEECCCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecC
Confidence            7877777778999954 5899999999999999999999999998755442 22 1110    0       012223489


Q ss_pred             cccc-c-CCcccceeeE---eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHH-----------hh-ccHHHHHHHHH
Q 021893          128 GKAL-G-GGVIPVSAVL---ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVI-----------RD-EKLAERSAHLG  190 (306)
Q Consensus       128 sK~~-~-~G~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~-----------~~-~~~~~~~~~~~  190 (306)
                      ||.+ + +|+ |+||++   +++++++.+.... ...++.+.+++.++.++++.-           .. .++.+.+++++
T Consensus       290 SK~~~~~~Gl-RiGy~i~~~~~~~li~~~~~~~-~~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr  367 (407)
T PLN02368        290 SKGYWGECGQ-RGGYFEMTNIPPKTVEEIYKVA-SIALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRA  367 (407)
T ss_pred             CcccccCCcc-ceEEEEEeCCCHHHHHHHHHHh-cccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence            9999 5 899 999998   4888888877642 345667888888888887521           11 12445666666


Q ss_pred             HHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893          191 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD  223 (306)
Q Consensus       191 ~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~  223 (306)
                      +.+.+.|+++    ++.....+..++++|..++
T Consensus       368 ~~~~~~L~~~----~g~~~~~P~Gafy~~~~i~  396 (407)
T PLN02368        368 RMMTDGFNSC----KNVVCNFTEGAMYSFPQIK  396 (407)
T ss_pred             HHHHHHHhCC----CCeEeCCCCeeeEeccCCC
Confidence            6666666665    1233344555666665443

>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.73  E-value=8.6e-17  Score=140.72  Aligned_cols=222  Identities=21%  Similarity=0.295  Sum_probs=164.3

Q ss_pred             cccccCCCHHHHHHHHHhc----------CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c-c
Q 021893           39 HLKVDFGDITALEKIFKES----------GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-L  106 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~----------~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~  106 (306)
                      +.++.|||+++||++|++.          +.+.-+|+++...++.|.++.    |+++..++++|..+|+.||+|+ | .
T Consensus       245 iRVfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~----Lp~vvalkkkykayl~lDEAHSiGA~  320 (519)
T KOG1357|consen  245 TRVFRHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD----LPEVVALKKKYKAYLYLDEAHSIGAM  320 (519)
T ss_pred             EEEEecCCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc----cHHHHHhhccccEEEEeecccccccc
Confidence            4889999999999999972          356778899999999999999    9999999999999999999998 3 4


Q ss_pred             cccccccccccCCCCC---c--EEEeccccc--CCcccceeeEeCHHHHhhcCCCCccCCC--CCCHHHHHHHHHHHHHH
Q 021893          107 ARSGRMLASDWEEVRP---D--MVILGKALG--GGVIPVSAVLADKEVMLCIQPGEHGSTF--GGNPLASAVAIASLDVI  177 (306)
Q Consensus       107 ~~~g~~~~~~~~~~~~---d--~~s~sK~~~--~G~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~aa~~al~~~  177 (306)
                      |..|... ++.++.++   |  +.+|.|+++  ||+     +.+++++++.++.......+  ..+++.+.....+++.+
T Consensus       321 g~tGrgv-ce~~g~d~~dvDImMGtftKSfga~GGy-----iagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i  394 (519)
T KOG1357|consen  321 GATGRGV-CEYFGVDPEDVDIMMGTFTKSFGAAGGY-----IAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHI  394 (519)
T ss_pred             CCCCcce-eeccCCCchhheeecceehhhcccccce-----ecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhh
Confidence            5666655 56666544   3  348889998  566     99999999988876555555  34566666667778777


Q ss_pred             hh-------ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----
Q 021893          178 RD-------EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----  246 (306)
Q Consensus       178 ~~-------~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----  246 (306)
                      .-       .+..+++.++..+++..|..++     .+..-.....++++.+..   ......+.+.|+++++.+.    
T Consensus       395 ~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~g-----fivyG~~dSpVvplll~~---~~k~~~f~r~~l~~nigvVvvgf  466 (519)
T KOG1357|consen  395 MGEDGTNRGRQKIERLAENSRYFRWELQKMG-----FIVYGNNDSPVVPLLLYG---PAKIVAFSREMLERNIGVVVVGF  466 (519)
T ss_pred             cCCCcccHHHHHHHHHHhhhHHHHHhhhcCc-----EEEecCCCCCcceeeecC---cccccHHHHHHHhcCceEEEEeC
Confidence            52       2256777888888888888764     222223333344444442   2345578889998865543    


Q ss_pred             cC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          247 PT---HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       247 ~~---~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      |+   -+...|++.+..++.++++.+++.+.+.=+
T Consensus       467 Patpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~  501 (519)
T KOG1357|consen  467 PATPLLESRARFCLSASHTKEDLDRALEVIDRVGD  501 (519)
T ss_pred             CCchHHHhHHHhhhcccccHHHHHHHHHHHhhhch
Confidence            22   246789999999999999999999876643

>PRK07908 hypothetical protein; Provisional

Probab=99.72  E-value=3.8e-16  Score=140.20  Aligned_cols=197  Identities=17%  Similarity=0.146  Sum_probs=133.1

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC--CCcEEEeccccc-CCc
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV--RPDMVILGKALG-GGV  135 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~--~~d~~s~sK~~~-~G~  135 (306)
                      ++++++++..++|+||.+.+    .++|.++|+ ++.++|+||+|.++. .+...+......  ...+.||||.++ +|+
T Consensus       138 ~~~~~i~l~np~NPTG~~~~----~~~l~~l~~-~~~~iIvDe~y~~~~-~~~~~~l~~~~~~~~i~i~S~SK~~~l~Gl  211 (349)
T PRK07908        138 DDADLVVIGNPTNPTSVLHP----AEQLLALRR-PGRILVVDEAFADAV-PGEPESLAGDDLPGVLVLRSLTKTWSLAGL  211 (349)
T ss_pred             cCCCEEEEcCCCCCCCCCcC----HHHHHHHHh-cCCEEEEECcchhhc-cCCccccccccCCCEEEEeecccccCCccc
Confidence            46788888888999998876    567777786 478888999998763 233222211111  112338999998 999


Q ss_pred             ccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE
Q 021893          136 IPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR---DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR  212 (306)
Q Consensus       136 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~  212 (306)
                       |+||+++++++++.+.....  .+..+++.+.++...++...   -++..++++++++++.+.|++.     ++....+
T Consensus       212 -RiG~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~~p  283 (349)
T PRK07908        212 -RVGYALGAPDVLARLTRGRA--HWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-----GARVVDP  283 (349)
T ss_pred             -eeeeeecCHHHHHHHHhcCC--CCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-----CcEeccC
Confidence             99999999999988775332  24445555554444433100   1224555666666666666654     1222333


Q ss_pred             EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          213 GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       213 ~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ..|.++|+.+++      ...+.+.|.++||.+.++      ++++||+++   .++++++.++++|++++.
T Consensus       284 ~~g~~~~~~~~~------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~---~~~~~~~~l~~al~~~~~  346 (349)
T PRK07908        284 AAAPFVLVRVPD------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV---RPRAEVPVLVQALAEILK  346 (349)
T ss_pred             CCceEEEEECCc------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe---CCCccHHHHHHHHHHHHh
Confidence            568888987763      467888899999999874      257999995   477899999999988765

>PRK10534 L-threonine aldolase; Provisional

Probab=99.72  E-value=1.9e-16  Score=141.28  Aligned_cols=211  Identities=18%  Similarity=0.221  Sum_probs=137.2

Q ss_pred             CHHHHHHHHHhcC---CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccc---ccccccccCC
Q 021893           46 DITALEKIFKESG---DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS---GRMLASDWEE  119 (306)
Q Consensus        46 d~~~le~~i~~~~---~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~---g~~~~~~~~~  119 (306)
                      |+++|+++++.+.   .++++|+++.++  +|.+. +.+.+++|.++|++|+++|++||+|. ++..   +... .....
T Consensus       112 d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~-~~~~l~~i~~~~~~~~~~lvvDEA~~-~~~~~~~~~~~-~~~~~  186 (333)
T PRK10534        112 PLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVL-PREYLKQAWEFTRERNLALHVDGARI-FNAVVAYGCEL-KEITQ  186 (333)
T ss_pred             CHHHHHHhhcccCcCcccceEEEEecCC--CCeec-CHHHHHHHHHHHHHcCCeEEeeHHHH-HHHHHHcCCCH-HHHHh
Confidence            6899998886321   157777777544  47554 68889999999999999999999987 3211   2111 01111


Q ss_pred             C-CCcEEEecccccCCcccce-eeEeCHHHHhhcCCCCccCC--CCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893          120 V-RPDMVILGKALGGGVIPVS-AVLADKEVMLCIQPGEHGST--FGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ  195 (306)
Q Consensus       120 ~-~~d~~s~sK~~~~G~~~~g-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~  195 (306)
                      . ..-+++|||+++  . ++| |+++++++++.++.......  +..+.+.++++.++++..  .+..++..+.++++.+
T Consensus       187 ~~~~~~~s~SK~~~--~-~~G~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~r~~l~~  261 (333)
T PRK10534        187 YCDSFTICLSKGLG--T-PVGSLLVGNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHN--VARLQEDHDNAAWLAE  261 (333)
T ss_pred             cCCEEEEEeEcCCC--C-cccceEEcCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHH
Confidence            1 112458999877  2 456 57789999888765332221  222334555555666432  1223344445667777


Q ss_pred             HHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          196 HLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       196 ~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      .|++.+..      ..+..++++++.++.    .+..++.+.|.++||.+.++  ..+|++....+|++++++++++|++
T Consensus       262 ~L~~~g~~------~~~~~~nfv~~~~~~----~~~~~~~~~l~~~gi~v~~~--~~~rl~~~~r~t~e~~~~~~~~l~~  329 (333)
T PRK10534        262 QLREAGAD------VMRQDTNMLFVRVGE----EQAAALGEYMRERNVLINAS--PIVRLVTHLDVSREQLAEVVAHWRA  329 (333)
T ss_pred             HHHhCCCc------cCCCCceEEEEECCc----hhHHHHHHHHHHcCeeecCC--ceEEEEEEeCCCHHHHHHHHHHHHH
Confidence            77775321      122357777776652    24567889999999999886  2589986656799999999999998


Q ss_pred             HHh
Q 021893          276 VLE  278 (306)
Q Consensus       276 ~l~  278 (306)
                      ++.
T Consensus       330 ~~~  332 (333)
T PRK10534        330 FLA  332 (333)
T ss_pred             Hhc
Confidence            765

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.71  E-value=1.4e-15  Score=137.74  Aligned_cols=212  Identities=16%  Similarity=0.165  Sum_probs=140.5

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccc----cccc-ccccCC
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS----GRML-ASDWEE  119 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~----g~~~-~~~~~~  119 (306)
                      .|++++++.++++  ..+++++. +++++|.+.+    +++|.++|+++|+++++|++|+++...    |... ..+..-
T Consensus       141 ~d~~~l~~~l~~~--~~~vv~~~-~~~~tG~~~~----~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~  213 (373)
T TIGR03812       141 VDVKDVEDLIDDN--TIGIVGIA-GTTELGQIDD----IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSL  213 (373)
T ss_pred             cCHHHHHHHHhhC--cEEEEEEC-CCCCCCccCC----HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccC
Confidence            3799999999742  23556666 4678898888    999999999999999999999853110    0000 011111


Q ss_pred             CCCcEEEec--ccccCCcccceeeE-eCHHHHhhcCCCCcc--CC------CCCCHHHHHHHHHHHHHHhhc---cHHHH
Q 021893          120 VRPDMVILG--KALGGGVIPVSAVL-ADKEVMLCIQPGEHG--ST------FGGNPLASAVAIASLDVIRDE---KLAER  185 (306)
Q Consensus       120 ~~~d~~s~s--K~~~~G~~~~g~~~-~~~~~~~~~~~~~~~--~~------~~~~~~~~~aa~~al~~~~~~---~~~~~  185 (306)
                      ...|.++++  |...++. +.|+++ .++++++.+......  ..      .+.+...++++.++++.+..+   +..++
T Consensus       214 ~~~d~~~~s~~K~~~~~~-~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~  292 (373)
T TIGR03812       214 PGVQSITIDPHKMGLSPI-PAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAE  292 (373)
T ss_pred             CCCCEEEECccccCCCcC-CceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            134555544  8444666 787554 577777765421111  00      123455677777888876543   36778


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-CCCEEEEeCCCCCCHH
Q 021893          186 SAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-HDTIVRLTPPLSISSN  264 (306)
Q Consensus       186 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-~~~~lRi~~~~~~t~~  264 (306)
                      ..++.+++++.|+++.     ..........++.+.++      ...++.+.|.++||.+... .++++|++++..++++
T Consensus       293 ~~~~~~~l~~~L~~~g-----~~~~~~~~~~~v~~~~~------~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~e  361 (373)
T TIGR03812       293 CMENTRYLVEELKKIG-----FEPVIEPVLNIVAFEVD------DPEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTRE  361 (373)
T ss_pred             HHHHHHHHHHHHHhCC-----CeEEcCCCceEEEEEeC------CHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHH
Confidence            8888888888888763     11111223344444443      2357999999999999876 5679999998899999


Q ss_pred             HHHHHHHHHHH
Q 021893          265 ELQEGSKALHD  275 (306)
Q Consensus       265 ~i~~~~~~l~~  275 (306)
                      |++.+++.|++
T Consensus       362 did~l~~~L~~  372 (373)
T TIGR03812       362 HIEEFLEDLKE  372 (373)
T ss_pred             HHHHHHHHHhh
Confidence            99999999875

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.71  E-value=3e-15  Score=136.65  Aligned_cols=216  Identities=19%  Similarity=0.245  Sum_probs=146.3

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-ccccccccccc--ccCCCCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLAS--DWEEVRP  122 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~--~~~~~~~  122 (306)
                      |.+++++++++   ++..+++.+.++.++ ..+    +++|+++|++||++|++|++|+ |+.. |.....  ... ...
T Consensus       208 D~d~l~~~~~~---~~plvii~g~S~~~~-~~d----l~~i~eia~~~gA~L~VD~AH~~Glig-g~~~~~~~~~~-~~~  277 (493)
T PRK13580        208 DYDEIAALARE---FKPLILVAGYSAYPR-RVN----FAKLREIADEVGAVLMVDMAHFAGLVA-GKVFTGDEDPV-PHA  277 (493)
T ss_pred             CHHHHHHHHhh---cCCEEEEeCccccCC-CcC----HHHHHHHHHHcCCEEEEECchhhceec-cccchhhcCCC-CCC
Confidence            78999999984   566777777776654 667    9999999999999999999998 5421 222210  111 134


Q ss_pred             cEE--EecccccCCcccceeeEeCHHHHhhcCCCCccCCCC-CCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHH
Q 021893          123 DMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG-GNPLASAVAIASLDVIRDE---KLAERSAHLGEELRQH  196 (306)
Q Consensus       123 d~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~aa~~al~~~~~~---~~~~~~~~~~~~l~~~  196 (306)
                      |++  |++|++.|.  +.|++++++++.+.+.... ...++ ..+...+++..++..+.+.   ++.+++.++.+.|++.
T Consensus       278 D~vtgT~hKaL~GP--~GG~I~~~~~l~~~L~~a~-P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~  354 (493)
T PRK13580        278 DIVTTTTHKTLRGP--RGGLVLAKKEYADAVDKGC-PLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEG  354 (493)
T ss_pred             cEEEeCChhhccCC--CeEEEEecHHHHHHHhhCC-CcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence            544  778999643  3467999999888774321 12222 2233444444456655432   3688999999999999


Q ss_pred             HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------C---CCEEEEeCCC----CCC
Q 021893          197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------H---DTIVRLTPPL----SIS  262 (306)
Q Consensus       197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~---~~~lRi~~~~----~~t  262 (306)
                      |.+.+...   + .......++++.+.+.  ......+.+.|.++||.+.+.       +   +..||++++.    .++
T Consensus       355 L~~~G~~v---v-~ggTdshIV~V~lg~~--~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~t  428 (493)
T PRK13580        355 FLKRGARL---V-TGGTDNHLVLIDVTSF--GLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMG  428 (493)
T ss_pred             HHhcCCCc---c-CCCCCCCEEEEEeCCH--HHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCC
Confidence            98875331   1 1113457777777641  223446778999999998732       2   5679999887    456


Q ss_pred             HHHHHHHHHHHHHHHhhhc
Q 021893          263 SNELQEGSKALHDVLELDL  281 (306)
Q Consensus       263 ~~~i~~~~~~l~~~l~~~~  281 (306)
                      ++|++.+++.|.++++ ..
T Consensus       429 eedi~~iad~l~~~l~-~~  446 (493)
T PRK13580        429 SDEMDEVAELIVKVLS-NT  446 (493)
T ss_pred             HHHHHHHHHHHHHHHH-hh
Confidence            9999999999999988 54

>PLN02242 methionine gamma-lyase

Probab=99.69  E-value=2.2e-16  Score=144.28  Aligned_cols=256  Identities=12%  Similarity=0.121  Sum_probs=156.0

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCC--------------CC--cccccCCCHHHHHHHHHhcCCcEEEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLL--------------PG--HLKVDFGDITALEKIFKESGDQIAGFLF   66 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~--------------~~--~~~~~~~d~~~le~~i~~~~~~~~~v~v   66 (306)
                      ..++++.+++++...+..++..+.+..-...|.|              .+  +.+++..|++.++++++.  .++++|++
T Consensus        92 ~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~l~~~i~~--~~tklV~l  169 (418)
T PLN02242         92 EAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLEAVKKAVVP--GKTKVLYF  169 (418)
T ss_pred             CeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHHHHHHhcCc--CCCEEEEE
Confidence            3566777777776666555444322111111222              12  234555689999999873  15899999


Q ss_pred             ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCccc-ceeeEeC
Q 021893           67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIP-VSAVLAD  144 (306)
Q Consensus        67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~-~g~~~~~  144 (306)
                      +.++|++|.+.+    +++|.++|++||+++|+|++|+.+...     ...++.+..+.|+||.++ +|. + .||++++
T Consensus       170 esp~NPtG~v~d----l~~I~~la~~~gi~livDea~~~~~~~-----~~~~g~divv~S~SK~l~g~g~-~~gG~iv~~  239 (418)
T PLN02242        170 ESISNPTLTVAD----IPELARIAHEKGVTVVVDNTFAPMVLS-----PARLGADVVVHSISKFISGGAD-IIAGAVCGP  239 (418)
T ss_pred             ecCCCCCCcccC----HHHHHHHHHHhCCEEEEECCCCccCCC-----HHHcCCcEEEEeCccccCCCCC-ceEEEEEcC
Confidence            999999999887    999999999999999999999743211     112233444558999998 466 5 5899999


Q ss_pred             HHHHhhcCCCCcc--CCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHh--hCCCce---------ee
Q 021893          145 KEVMLCIQPGEHG--STFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQ--QFPNYV---------KE  210 (306)
Q Consensus       145 ~~~~~~~~~~~~~--~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~--~~~~~~---------~~  210 (306)
                      +++++.+......  .........+.+++.+.. +.. ....++.+++++.+.+.|++...  .+|+..         ..
T Consensus       240 ~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~-l~tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~  318 (418)
T PLN02242        240 AELVNSMMDLHHGALMLLGPTMNPKVAFELSER-LPHLSLRMKEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSM  318 (418)
T ss_pred             HHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcC-CCcHHHHHHHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHh
Confidence            9988887654331  112222223333332221 111 22345777888888888887631  111100         01


Q ss_pred             E---EEeeeEEEEEEecCCChhhHHHHHHHHHHC----Cceec----------cC-----------------CCCEEEEe
Q 021893          211 V---RGRGLFNAVEFDKTALPVSAYDICLKMKER----GILAK----------PT-----------------HDTIVRLT  256 (306)
Q Consensus       211 ~---~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~----Gi~~~----------~~-----------------~~~~lRi~  256 (306)
                      .   .+.|.++.|++..   ...+..|++.+.--    .+.++          |.                 .++.+|++
T Consensus       319 ~~~~~g~g~~~sf~l~~---~~~~~~f~~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRls  395 (418)
T PLN02242        319 ANKGYGFGGLLCLDMDT---EERANRLMRYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMS  395 (418)
T ss_pred             cccCCCceeEEEEEECC---HHHHHHHHHHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEE
Confidence            1   2568889998853   34566777777611    11111          10                 24689999


Q ss_pred             CCCCCCHH-HHHHHHHHHHHHHh
Q 021893          257 PPLSISSN-ELQEGSKALHDVLE  278 (306)
Q Consensus       257 ~~~~~t~~-~i~~~~~~l~~~l~  278 (306)
                      ..    -| +.+.+++.|+++|+
T Consensus       396 vG----lE~~~~dli~dl~~al~  414 (418)
T PLN02242        396 VG----YTGTLEQRWSQFEKALS  414 (418)
T ss_pred             ec----CCCCHHHHHHHHHHHHH
Confidence            43    35 37778888888877

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.69  E-value=6.4e-15  Score=134.97  Aligned_cols=217  Identities=18%  Similarity=0.165  Sum_probs=137.7

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCc
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d  123 (306)
                      .|++++++.++.+  ++++|+++..  ..|...+    +++|.++|++||++|++|++|+ |....|..  ..... ..|
T Consensus       155 ~d~~~le~~l~~~--~~klVi~~~~--~~g~~~d----l~~l~~la~~~g~~livD~Aha~G~~~~g~~--~~~~~-~~D  223 (416)
T PRK13034        155 IDYDEVEELAKEH--KPKLIIAGFS--AYPRELD----FARFREIADEVGALLMVDMAHIAGLVAAGEH--PNPFP-HAH  223 (416)
T ss_pred             cCHHHHHHHHhhc--CCeEEEECCC--ccccccC----HHHHHHHHHHcCCEEEEeCcccccCcccCCC--CCCCC-Cce
Confidence            6899999998753  4678877432  2355566    9999999999999999999997 43222321  11111 245


Q ss_pred             EE--EecccccCCcccceeeEeC-HHHHhhcCCCCccC-CCCCCHHHHHHHH-HHHHHHhh--ccHHHHHHHHHHHHHHH
Q 021893          124 MV--ILGKALGGGVIPVSAVLAD-KEVMLCIQPGEHGS-TFGGNPLASAVAI-ASLDVIRD--EKLAERSAHLGEELRQH  196 (306)
Q Consensus       124 ~~--s~sK~~~~G~~~~g~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~aa~-~al~~~~~--~~~~~~~~~~~~~l~~~  196 (306)
                      ++  +++|+++|+.  .|+++++ +.+.+.++.....+ .-...+...+++. +.++.+..  .++.+++.++.+++++.
T Consensus       224 i~~~s~~K~l~g~~--GG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~  301 (416)
T PRK13034        224 VVTTTTHKTLRGPR--GGMILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEV  301 (416)
T ss_pred             EEEEeCcccCCCCC--CeEEEECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH
Confidence            54  6779996543  2456665 44444444321111 1112233333333 44444322  33578999999999999


Q ss_pred             HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc----------CCCCEEEEeCCC----CCC
Q 021893          197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP----------THDTIVRLTPPL----SIS  262 (306)
Q Consensus       197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~----------~~~~~lRi~~~~----~~t  262 (306)
                      |++.+...   . .........++.+.+.  ......+.+.|.++||.+.+          ..+..+|++++.    .++
T Consensus       302 L~~~G~~~---~-~~~~~t~i~~v~~~~~--~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~  375 (416)
T PRK13034        302 LKERGYDL---V-SGGTDNHLLLVDLRPK--GLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFG  375 (416)
T ss_pred             HHHcCCEe---c-cCCCCCcEEEEEcCCC--CCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCC
Confidence            98763221   1 1112455566666542  23556677888889999874          234579999887    677


Q ss_pred             HHHHHHHHHHHHHHHhhhc
Q 021893          263 SNELQEGSKALHDVLELDL  281 (306)
Q Consensus       263 ~~~i~~~~~~l~~~l~~~~  281 (306)
                      ++|++.+++.|++++. +.
T Consensus       376 ~~di~~l~~~l~~~~~-~~  393 (416)
T PRK13034        376 EAEFREIANWILDVLD-DL  393 (416)
T ss_pred             HHHHHHHHHHHHHHHh-cC
Confidence            9999999999999988 55

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.69  E-value=3.7e-16  Score=141.17  Aligned_cols=217  Identities=18%  Similarity=0.179  Sum_probs=143.6

Q ss_pred             cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893           39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE  118 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~  118 (306)
                      +.+++.+|++++++.++   +++++|++++++|++|.+.+    +++|.++|++||+++|+|++++... .     ....
T Consensus       107 ~~~v~~~d~~~l~~~i~---~~~~~v~~e~~~np~g~~~d----l~~i~~la~~~g~~livD~t~~~~~-~-----~~~~  173 (369)
T cd00614         107 VTFVDPDDPEALEAAIK---PETKLVYVESPTNPTLKVVD----IEAIAELAHEHGALLVVDNTFATPY-L-----QRPL  173 (369)
T ss_pred             EEEeCCCCHHHHHHhcC---CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcchh-c-----CChh
Confidence            45667788999999987   47899999999999999888    9999999999999999999997321 1     1122


Q ss_pred             CCCCcEE--EecccccC-C-cccceeeEeCH-HHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893          119 EVRPDMV--ILGKALGG-G-VIPVSAVLADK-EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL  193 (306)
Q Consensus       119 ~~~~d~~--s~sK~~~~-G-~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l  193 (306)
                      ....|++  |++|.++| | . +.|++++++ ++++.++..........++..+.++..+++.+..  ..++..++.+.+
T Consensus       174 ~~g~Divv~S~tK~l~g~~~~-~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~~--r~~~~~~na~~l  250 (369)
T cd00614         174 ELGADIVVHSATKYIGGHSDV-IAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKTLPL--RMERHSENALKV  250 (369)
T ss_pred             hhCCcEEEeccceeccCCCCc-eEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCCHHH--HHHHHHHHHHHH
Confidence            2344554  88899984 3 5 789999976 7877776543333445566666666666654332  356667778888


Q ss_pred             HHHHHHHHhh----CCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----------cC--
Q 021893          194 RQHLFKIQQQ----FPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----------PT--  248 (306)
Q Consensus       194 ~~~L~~~~~~----~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----------~~--  248 (306)
                      .+.|++....    +|...         ....+.|.++.+.+...  ......|.+.|.--.+.++          |.  
T Consensus       251 a~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~--~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~  328 (369)
T cd00614         251 AEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGG--LEAAKKFLNALKLFSLAVSLGGVESLVEHPASM  328 (369)
T ss_pred             HHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCC--HHHHHHHHHcCCcceEcccCCCCceeeeCCccc
Confidence            8888765311    11100         01235688889888631  3345556555542211111          10  


Q ss_pred             ---------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          249 ---------------HDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       249 ---------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                                     .++.+|++..+    ||.+.+++.|++++
T Consensus       329 ~~~~~~~~~~~~~g~~~~liR~svGl----E~~~dl~~dl~~al  368 (369)
T cd00614         329 THSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQAL  368 (369)
T ss_pred             ccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence                           24689999544    67888888888776

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]

Probab=99.69  E-value=2.8e-16  Score=130.84  Aligned_cols=222  Identities=16%  Similarity=0.154  Sum_probs=162.6

Q ss_pred             CHHHHHHHHHh-----cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC
Q 021893           46 DITALEKIFKE-----SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV  120 (306)
Q Consensus        46 d~~~le~~i~~-----~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~  120 (306)
                      |++++|+.+..     |.+.+++|.+|..+++.|.++.+-|++.++.++|+++|+-|.+|.+.-.-.......+.....-
T Consensus       135 ~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~  214 (384)
T KOG1368|consen  135 DLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICS  214 (384)
T ss_pred             eHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHH
Confidence            69999999994     3467999999999999888888999999999999999999999988752211112222222222


Q ss_pred             CCc--EEEecccccCCcccce-eeEeCHHHHhhcCCC--CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893          121 RPD--MVILGKALGGGVIPVS-AVLADKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ  195 (306)
Q Consensus       121 ~~d--~~s~sK~~~~G~~~~g-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~  195 (306)
                      ..|  -+|+||++|   +|+| .++++++++++.+..  ..++.+....+.+++++.+++....  ...+..++.+.+.+
T Consensus       215 ~fDSVsiCLSKglg---APVGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~~~~--~L~~dHk~A~~lAe  289 (384)
T KOG1368|consen  215 AFDSVSICLSKGLG---APVGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVALDENVP--LLRADHKRAKELAE  289 (384)
T ss_pred             hhhhhhhhhhccCC---CCcccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhcchH--HHHHHHHHHHHHHH
Confidence            234  348999999   3445 578899999876532  3555666777888888887764322  45566667777777


Q ss_pred             HHHHHHhhCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893          196 HLFKIQQQFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALH  274 (306)
Q Consensus       196 ~L~~~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~  274 (306)
                      .++...    .....++ ....++.+.+...  ..+.+++++.+.++||.+-++....+|+.++...|.++++....++.
T Consensus       290 ~~~~~~----~i~v~v~a~etNiv~~~l~q~--~~~~~~l~~~~~k~gi~lm~~~s~r~Rivlh~Qvt~~~ve~~~~~~~  363 (384)
T KOG1368|consen  290 YINTPE----EIRVEVPAVETNIVNMVLCQA--RLTAEELCKFLEKNGILLMGGASRRIRIVLHHQVTDEDVEYVKSVLS  363 (384)
T ss_pred             Hhcccc----ceeeecchhhcceeeeecccc--cCCHHHHHHHHHHCCeEEeeccccceEEEEEEecCHHHHHHHHHHHH
Confidence            777442    2334444 4566667666542  46788999999999999998877889999999999999999999995


Q ss_pred             HHHh
Q 021893          275 DVLE  278 (306)
Q Consensus       275 ~~l~  278 (306)
                      +.+.
T Consensus       364 k~~~  367 (384)
T KOG1368|consen  364 KKFL  367 (384)
T ss_pred             HHHH
Confidence            4443

>PLN02651 cysteine desulfurase

Probab=99.68  E-value=1.6e-15  Score=136.97  Aligned_cols=201  Identities=17%  Similarity=0.196  Sum_probs=139.2

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |+++++++|+   +++++++++++++++|.+.+    +++|.++|+++|+++++|.+|+    .|. ..++...+.+|++
T Consensus       127 d~~~l~~~i~---~~t~lv~v~~~~n~tG~~~~----l~~I~~~~~~~g~~~~vD~a~~----~g~-~~~~~~~~~~D~~  194 (364)
T PLN02651        127 DLDELAAAIR---PDTALVSVMAVNNEIGVIQP----VEEIGELCREKKVLFHTDAAQA----VGK-IPVDVDDLGVDLM  194 (364)
T ss_pred             CHHHHHHhcC---CCcEEEEEECCCCCceeccc----HHHHHHHHHHcCCEEEEEcchh----hCC-cccCcccCCCCEE
Confidence            7899999997   57899999999999999998    9999999999999999999998    122 1123333456777


Q ss_pred             Eec--ccccCCcccceeeEeCHHHHhhcCCCCcc-------CCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 021893          126 ILG--KALGGGVIPVSAVLADKEVMLCIQPGEHG-------STFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELR  194 (306)
Q Consensus       126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~  194 (306)
                      ++|  |. +|.. ++|+++.+++....+.+...+       ...+.+..++.++.++++.+.+  ++..++.+++.++++
T Consensus       195 ~~s~hK~-~gp~-G~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~  272 (364)
T PLN02651        195 SISGHKI-YGPK-GVGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLL  272 (364)
T ss_pred             Eechhhh-CCCC-ceEEEEEcCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            554  95 5555 789999998877666543221       1234567778888888888764  345677777777777


Q ss_pred             HHHHHHHhhCCCceee--E-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----------------------
Q 021893          195 QHLFKIQQQFPNYVKE--V-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----------------------  249 (306)
Q Consensus       195 ~~L~~~~~~~~~~~~~--~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----------------------  249 (306)
                      +.|++....+ .....  . .....++.+.++    +.+++++.+.|.+  |.++.+.                      
T Consensus       273 ~~l~~~~~~~-~i~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~  345 (364)
T PLN02651        273 NGLRAKLGGV-RVNGPRDPEKRYPGTLNLSFA----YVEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEM  345 (364)
T ss_pred             HHHHhhCCCE-EEECCCCcccCcCCEEEEEeC----CCCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHH
Confidence            7776531111 01111  1 112345666665    3457788888865  6665321                      


Q ss_pred             -CCEEEEeCCCCCCHHHHH
Q 021893          250 -DTIVRLTPPLSISSNELQ  267 (306)
Q Consensus       250 -~~~lRi~~~~~~t~~~i~  267 (306)
                       .+.+|+|++.++|++||+
T Consensus       346 ~~~~vR~S~~~~~t~~did  364 (364)
T PLN02651        346 AHGSLRLGVGRFTTEEEVD  364 (364)
T ss_pred             hCceEEEEcCCCCCHHHcC
Confidence             368999999999999975

>PRK06460 hypothetical protein; Provisional

Probab=99.67  E-value=1.5e-15  Score=137.23  Aligned_cols=219  Identities=14%  Similarity=0.145  Sum_probs=138.9

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE  119 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~  119 (306)
                      ..++.++.+.+++.++   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+||+|... .....  . .++
T Consensus       113 ~~~~~~~~~~l~~~~~---~~tklV~l~sp~NPtG~v~d----~~~I~~la~~~g~~vivDea~~~~-~~~~~--l-~~~  181 (376)
T PRK06460        113 DASNPGSDNIIEKAKS---KRYDVVFVENITNPLLRVVD----ITELSKVCKENGSILIVDATFSTP-INQKP--L-ELG  181 (376)
T ss_pred             EEECCCCHHHHHHhcC---CCceEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCcCcc-ccCCh--h-hcC
Confidence            4455556556665544   57899999999999999988    899999999999999999999732 11111  1 123


Q ss_pred             CCCcEEEecccccC--CcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Q 021893          120 VRPDMVILGKALGG--GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHL  197 (306)
Q Consensus       120 ~~~d~~s~sK~~~~--G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L  197 (306)
                      .+..+.|+||.++|  +. ++||+++++++++.++........+.++..+..++..++++..  ..+++.++++++.+.|
T Consensus       182 ~divv~S~sK~l~G~~~~-~~G~~~~~~~l~~~l~~~~~~~g~~~~~~~a~~~l~~~~~l~~--r~~~~~~n~~~l~~~L  258 (376)
T PRK06460        182 ADIVVHSASKFLAGHNDV-IAGLAAGYGKLLNVIDQMRRTLGTSLDPHAAYLTLRGIKTLKI--RMDVINRNAEQIAEFL  258 (376)
T ss_pred             CCEEEeecceeccCCCCc-eEEEEecCHHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHH
Confidence            23334488999974  45 7899999999888776433333333455544444455555533  4667778888888888


Q ss_pred             HHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHH--HCCcee--------cc-------
Q 021893          198 FKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMK--ERGILA--------KP-------  247 (306)
Q Consensus       198 ~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~--~~Gi~~--------~~-------  247 (306)
                      ++...    .+|...         ....+.|.++.|++...  ......|++.|.  ..+.-.        .|       
T Consensus       259 ~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~--~~~~~~~~~~l~~~~~~~s~Gg~~sl~~~p~~~~~~~  336 (376)
T PRK06460        259 EGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGG--QESALKVMKSLKLIIPAQTLGGVNSVISHPATMSHRT  336 (376)
T ss_pred             HcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCc--HHHHHHHHHhCCcceeccCCCCCceEEeCcccccccc
Confidence            86421    111000         11245788899998631  233455655553  111111        11       


Q ss_pred             ----------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          248 ----------THDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       248 ----------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                ..++.||+++.    -||.+.+++.|+++|+
T Consensus       337 ~~~~~~~~~gi~~~liR~svG----lE~~~dl~~dl~~al~  373 (376)
T PRK06460        337 LSLEERKIVGITDSLLRLSVG----IEDVNDLIEDLDRALS  373 (376)
T ss_pred             CCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHH
Confidence                      12578999943    3667778888888876

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.67  E-value=9.1e-16  Score=139.29  Aligned_cols=216  Identities=14%  Similarity=0.079  Sum_probs=140.7

Q ss_pred             cccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC
Q 021893           41 KVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV  120 (306)
Q Consensus        41 ~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~  120 (306)
                      .++..|+++++++++   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+|++|+.. ..+..+   ..+.
T Consensus       130 ~~~~~d~~~l~~~i~---~~tklV~lesp~NptG~v~d----l~~I~~la~~~g~~vivD~a~a~~-~~~~pl---~~g~  198 (386)
T PRK06767        130 FCDMETEADIENKIR---PNTKLIFVETPINPTMKLID----LKQVIRVAKRNGLLVIVDNTFCSP-YLQRPL---ELGC  198 (386)
T ss_pred             EeCCCCHHHHHHhhC---cCceEEEEeCCCCCCceecC----HHHHHHHHHHcCCEEEEECCCccc-ccCCch---hcCC
Confidence            344568899999887   57899999999999999888    999999999999999999999621 111111   1233


Q ss_pred             CCcEEEecccccC-Ccccc-eeeEeCHHHHhhcCC-CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Q 021893          121 RPDMVILGKALGG-GVIPV-SAVLADKEVMLCIQP-GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHL  197 (306)
Q Consensus       121 ~~d~~s~sK~~~~-G~~~~-g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L  197 (306)
                      +..+.|++|.++| |. ++ |+++++++.++.+.. .........+++.+.++..+++.+..  ..++.+++.+.+.+.|
T Consensus       199 Div~~S~sK~l~g~g~-~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~tl~~--r~~~~~~~a~~la~~L  275 (386)
T PRK06767        199 DAVVHSATKYIGGHGD-VVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLKTLAV--RMDRHCDNAEKIVSFL  275 (386)
T ss_pred             cEEEecCcceecCCCC-ceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCcHHH--HHHHHHHHHHHHHHHH
Confidence            3334477899985 66 65 789898887766432 11111112345555555555544322  3466677778888887


Q ss_pred             HHHHhhCCCcee---------eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC--------------------
Q 021893          198 FKIQQQFPNYVK---------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT--------------------  248 (306)
Q Consensus       198 ~~~~~~~~~~~~---------~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------------------  248 (306)
                      ++....-  .+.         ...+.|.++.|++...  ......|.+.|...++.++-+                    
T Consensus       276 ~~~p~v~--~v~~p~~~~~~~~~~~~gg~vsf~l~~~--~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~  351 (386)
T PRK06767        276 KNHDAVE--GVWYPEGELASRQMKRGGGVISFSIKGG--KEETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAE  351 (386)
T ss_pred             HcCCCcc--EEECCCcHHHHHhCCCCCceEEEEEcCC--HHHHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHH
Confidence            7653110  111         2235677888888631  345678888887776555421                    


Q ss_pred             -------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 -------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 -------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                             .++.+|++..    -||.+.+++-|.+++.
T Consensus       352 ~~~~~gi~~~l~R~svG----lE~~~dl~~dl~~al~  384 (386)
T PRK06767        352 LRQEMGIYDNLIRLSVG----LESWEDIVSDLEQALK  384 (386)
T ss_pred             HHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHh
Confidence                   2468999944    3567777888877776

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.67  E-value=7.4e-15  Score=134.35  Aligned_cols=212  Identities=15%  Similarity=0.239  Sum_probs=138.7

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |++.+++.++   +++++++++++++++|.+.+    +++|.++|+++|+++++|++|+ +   |.. .++..+..+|++
T Consensus       131 d~~~l~~~l~---~~~~lv~v~~~~n~tG~~~~----~~~I~~l~~~~g~~livD~a~a-~---g~~-~~~~~~~~~D~~  198 (402)
T TIGR02006       131 DLEELKAAIR---DDTILVSIMHVNNEIGVIQD----IAAIGEICRERKVFFHVDAAQS-V---GKI-PINVNELKVDLM  198 (402)
T ss_pred             CHHHHHHhcC---CCCEEEEEECCCcCceeccc----HHHHHHHHHHcCCEEEEEcchh-c---CCc-ccCccccCCCEE
Confidence            7899999887   46899999999999999988    9999999999999999999997 2   211 123334567888


Q ss_pred             Eec--ccccCCcccceeeEeCHHHHhhcCCCCcc-------CCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 021893          126 ILG--KALGGGVIPVSAVLADKEVMLCIQPGEHG-------STFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELR  194 (306)
Q Consensus       126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~  194 (306)
                      ++|  |.++ .. ++|+++.+++....+.+....       ...+.+.....+..++++.+..  +...++.+++.++++
T Consensus       199 ~~s~~K~~g-p~-G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~  276 (402)
T TIGR02006       199 SISGHKIYG-PK-GIGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLL  276 (402)
T ss_pred             EEehhhhcC-CC-ceEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            777  9654 44 678888887655444433221       1124456666666688877654  234456666666666


Q ss_pred             HHHHHHHhhCCCceee--EEEe-eeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----------------------
Q 021893          195 QHLFKIQQQFPNYVKE--VRGR-GLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-----------------------  248 (306)
Q Consensus       195 ~~L~~~~~~~~~~~~~--~~~~-g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----------------------  248 (306)
                      +.|+++.    ++...  .... ...+.+.+..    ....++...+  +++.++.+                       
T Consensus       277 ~~l~~~~----~v~~~~~~~~~~p~~~~v~f~~----~~~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~  346 (402)
T TIGR02006       277 NGIKSIE----EVYLNGDLEHRVPGNLNVSFNY----VEGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDEL  346 (402)
T ss_pred             HHHhcCC----CEEEeCCccccCCCeEEEEEeC----cCHHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhh
Confidence            6665532    11111  1111 1111233332    2234455444  34443311                       


Q ss_pred             CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          249 HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       249 ~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      ..+.+|++++..+|++|++.+++.|+++++ .+.
T Consensus       347 ~~~~vR~S~~~~~t~edid~l~~~l~~~~~-~~~  379 (402)
T TIGR02006       347 AHSSIRFTIGRFTTEEEIDYAVKLVKSAID-KLR  379 (402)
T ss_pred             cCceEEEEecCCCCHHHHHHHHHHHHHHHH-HHH
Confidence            137899999999999999999999999988 654

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=99.67  E-value=4.9e-15  Score=123.65  Aligned_cols=220  Identities=15%  Similarity=0.239  Sum_probs=154.8

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc--
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD--  123 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d--  123 (306)
                      |++.|+  +   .+.+.+|+++-+.|+||.+. +.+.+.+|-.++++||++|+.|.+|+- -.++-.|.--..-+.++  
T Consensus       170 DF~~l~--i---~e~~g~ic~SRPtNPTGNVl-TdeE~~kldalA~~~giPliIDnAYg~-PFP~iifsd~~~~w~~Nii  242 (417)
T COG3977         170 DFEHLH--I---GESTGAICVSRPTNPTGNVL-TDEELAKLDALARQHGIPLIIDNAYGV-PFPGIIFSDATPLWNENII  242 (417)
T ss_pred             CHHHcc--c---ccccceEEecCCCCCCCCcc-cHHHHHHHHHHhhhcCCcEEEecccCC-CCCceecccccccCCCCEE
Confidence            566654  2   25799999999999999765 899999999999999999999999972 12333332111123344  


Q ss_pred             -EEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHH-----HhhccHHHHHHHHHHHHHHHH
Q 021893          124 -MVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV-----IRDEKLAERSAHLGEELRQHL  197 (306)
Q Consensus       124 -~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~-----~~~~~~~~~~~~~~~~l~~~L  197 (306)
                       +.|+||.=-+|. |+|.+++++++++.+....-.....+..++.+.+...++-     +.++=++..++.........|
T Consensus       243 lC~SLSK~GLPG~-R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l  321 (417)
T COG3977         243 LCMSLSKLGLPGS-RCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAIL  321 (417)
T ss_pred             EEeehhhcCCCCc-ceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHH
Confidence             347778555898 9999999999999988754444444444554444433332     112223455666666666677


Q ss_pred             HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-------------CCEEEEeCCCCCCHH
Q 021893          198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-------------DTIVRLTPPLSISSN  264 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------------~~~lRi~~~~~~t~~  264 (306)
                      ++....++ +..-.+....++|+=+.+  .+....+++++|+.+|+++.|+.             -.++|++  +..+++
T Consensus       322 ~~~lp~~~-~~iHkpEGAIFlWLWf~d--LPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn--~~~~~~  396 (417)
T COG3977         322 RRYLPEYR-CLIHKPEGAIFLWLWFKD--LPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMN--YVPEPE  396 (417)
T ss_pred             HHhcCccc-eeeecCCcceeehhhhcc--CCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEe--cCCCHH
Confidence            77666653 555555555566655555  34778899999999999999862             3689999  888999


Q ss_pred             HHHHHHHHHHHHHh
Q 021893          265 ELQEGSKALHDVLE  278 (306)
Q Consensus       265 ~i~~~~~~l~~~l~  278 (306)
                      +|+..+.+|.+.++
T Consensus       397 ~ie~Gva~lae~ve  410 (417)
T COG3977         397 KIEKGVAILAEEVE  410 (417)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998887

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.66  E-value=4.8e-15  Score=132.81  Aligned_cols=200  Identities=18%  Similarity=0.126  Sum_probs=130.1

Q ss_pred             CCHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC-C
Q 021893           45 GDITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE-V  120 (306)
Q Consensus        45 ~d~~~le~~i~~---~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~-~  120 (306)
                      .|+++|++++++   ++.++++++++.+++++|.+.+    +++|.++|+++|+++++|++|+++............. .
T Consensus       130 ~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~  205 (345)
T cd06450         130 MDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP----LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIE  205 (345)
T ss_pred             cCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC----HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCcc
Confidence            489999999985   2226778888888888998877    9999999999999999999998542211100000011 1


Q ss_pred             CCcEE--EecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHH
Q 021893          121 RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQ  195 (306)
Q Consensus       121 ~~d~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~  195 (306)
                      ..|.+  +++|.+++++ ++|+++.+                      ..++.++++.+..   ++..++..++.+++++
T Consensus       206 ~~d~~~~s~~K~l~~p~-g~g~~~~~----------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~  262 (345)
T cd06450         206 RVDSISVDPHKYGLVPL-GCSAVLVR----------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAE  262 (345)
T ss_pred             ccCEEEEchhHhhCCCc-chHHHHHH----------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence            34544  6779888877 88887655                      3333344444433   3345666666777776


Q ss_pred             HHHHHHhhCCCceeeEEEeeeEEEEEEecC-CChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCCC-CCHHHHHHH
Q 021893          196 HLFKIQQQFPNYVKEVRGRGLFNAVEFDKT-ALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLS-ISSNELQEG  269 (306)
Q Consensus       196 ~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~-~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~~-~t~~~i~~~  269 (306)
                      .|+++.    +.....+..+.++.+.+++. ..+....++.+.|.++|+++.+.    ...++|++++.. ++++|++++
T Consensus       263 ~L~~~~----~~~~~~~~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l  338 (345)
T cd06450         263 LIRADP----GFELLGEPNLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADAL  338 (345)
T ss_pred             HHhcCC----CeEEecCCceeEEEEEECCcchhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHH
Confidence            666542    12111222345556655531 00245678999999996554432    357899999876 499999999


Q ss_pred             HHHHHH
Q 021893          270 SKALHD  275 (306)
Q Consensus       270 ~~~l~~  275 (306)
                      ++.|++
T Consensus       339 ~~~l~~  344 (345)
T cd06450         339 LEDIER  344 (345)
T ss_pred             HHHHHh
Confidence            999875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>PRK07049 methionine gamma-lyase; Validated

Probab=99.66  E-value=2.4e-15  Score=137.91  Aligned_cols=258  Identities=13%  Similarity=0.137  Sum_probs=154.6

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCCc---------------ccc-cCCCHHHHHHHHHhc--CCcEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH---------------LKV-DFGDITALEKIFKES--GDQIAGFL   65 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~-~~~d~~~le~~i~~~--~~~~~~v~   65 (306)
                      .++++.+|..+-.....++..+.+..-...|.|++.               +.+ ...|++.+++.+++.  .+++++|+
T Consensus       100 ~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~tklv~  179 (427)
T PRK07049        100 SAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAAIGAAAEAAAAKGRVSLIL  179 (427)
T ss_pred             cEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHHHHHHHHhhccCCCceEEE
Confidence            466677777665444444444332222223344321               112 234788888888642  24689999


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHH------cCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc--CCccc
Q 021893           66 FEPIQGEAGVIIPPDGYLKAVRDLCSK------YNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG--GGVIP  137 (306)
Q Consensus        66 v~~~~~~~G~~~~~~~~l~~i~~l~~~------~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~--~G~~~  137 (306)
                      ++.++|++|.+.+    +++|.++++.      +++++|+||++.++.... .  . ..+....+-|+||.++  +|+ +
T Consensus       180 lesP~NPtg~v~d----~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~-p--l-~~g~divv~S~SK~~gG~~gl-r  250 (427)
T PRK07049        180 IETPANPTNSLVD----VAAVRRVADAIEARQGHRPIIACDNTLLGPVFQK-P--L-EHGADLSVYSLTKYVGGHSDL-V  250 (427)
T ss_pred             EECCCCCCCcccC----HHHHHHHHHHhhhcccCCCEEEEECCccccccCC-c--c-ccCCCEEEEcCceeecCCCCc-E
Confidence            9999999998776    5555555555      899999999986431111 1  1 1222233449999999  588 9


Q ss_pred             ceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----hCCCce-----
Q 021893          138 VSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYV-----  208 (306)
Q Consensus       138 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~-----  208 (306)
                      +||+++++++++.++........+.++..+.++..+++.+...  .++..+++..+.+.|++...    .+|+..     
T Consensus       251 ~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~tl~~R--~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~  328 (427)
T PRK07049        251 AGAVLGRKALIRQVRALRSAIGTQLDPHSCWMLGRSLETLVLR--MERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSA  328 (427)
T ss_pred             EEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCChHHHH--HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCc
Confidence            9999999998887765433334456777777777777654332  44556677777777776421    122110     


Q ss_pred             ------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC--Cceec--------cC-----------------CCCEEEE
Q 021893          209 ------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKER--GILAK--------PT-----------------HDTIVRL  255 (306)
Q Consensus       209 ------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~--Gi~~~--------~~-----------------~~~~lRi  255 (306)
                            ....+.|.++.|++...  ......|++.|.=-  ++-.+        |.                 .++.||+
T Consensus       329 ~~~~~~~~~~g~g~~~s~~~~~~--~~~~~~f~~~l~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~  406 (427)
T PRK07049        329 YGAVYKRQCTGAGSTFSFDIKGG--QAAAFRFLNALQIFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRL  406 (427)
T ss_pred             cHHHHHhhCCCCccEEEEEEcCC--HHHHHHHHHcCcccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEE
Confidence                  11235688889988631  23344565555321  21111        10                 2468999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHHh
Q 021893          256 TPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       256 ~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ++.    -||.+.+++-|+++|+
T Consensus       407 svG----lE~~~dl~~dl~~al~  425 (427)
T PRK07049        407 SIG----IEHPDDLIADLAQALD  425 (427)
T ss_pred             EeC----cCCHHHHHHHHHHHHh
Confidence            943    3667778888887776

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.66  E-value=3e-15  Score=134.99  Aligned_cols=213  Identities=15%  Similarity=0.155  Sum_probs=134.6

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccC
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWE  118 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~  118 (306)
                      ..++..|++.++++++   +++++|+++.++|+++...+    +++|.++|+++|+++|+||+|. ++  ....  . ..
T Consensus       119 ~~vd~~d~~~l~~~i~---~~tklv~le~P~NP~~~~~d----l~~I~~la~~~g~~lIvD~t~~~~~--~~~p--~-~~  186 (366)
T PRK08247        119 VYVNTASLKAIEQAIT---PNTKAIFIETPTNPLMQETD----IAAIAKIAKKHGLLLIVDNTFYTPV--LQRP--L-EE  186 (366)
T ss_pred             EEECCCCHHHHHHhcc---cCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCcccc--ccCc--h-hc
Confidence            4556678999999987   47899999998888876655    9999999999999999999995 22  1111  1 12


Q ss_pred             CCCCcEEEecccccC--CcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893          119 EVRPDMVILGKALGG--GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ  195 (306)
Q Consensus       119 ~~~~d~~s~sK~~~~--G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~  195 (306)
                      +.+..+.|+||.++|  +. ..|+++.+ +++++.+...........++..+..+..+++.+..  ..++.+++.+.+.+
T Consensus       187 g~di~i~S~sK~~~g~~d~-~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~tl~~--r~~~~~~~a~~l~~  263 (366)
T PRK08247        187 GADIVIHSATKYLGGHNDV-LAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMKTLAL--RMRQHEENAKAIAA  263 (366)
T ss_pred             CCcEEEeecceeccCCCce-eeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccCcHHH--HHHHHHHHHHHHHH
Confidence            333445589999984  55 78888886 66776665433333444566666666666654432  23455677777777


Q ss_pred             HHHHHHhhCCCce-eeEEEeeeEEEEEEecCCChhhHHHHHHHHH----------HCCceeccC----------------
Q 021893          196 HLFKIQQQFPNYV-KEVRGRGLFNAVEFDKTALPVSAYDICLKMK----------ERGILAKPT----------------  248 (306)
Q Consensus       196 ~L~~~~~~~~~~~-~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~----------~~Gi~~~~~----------------  248 (306)
                      .|++.    |.+. ...++.|.++.+.+..   ......|.+.+.          .+.+++.|.                
T Consensus       264 ~L~~~----p~v~~v~~P~~gg~~sf~~~~---~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~g  336 (366)
T PRK08247        264 FLNEQ----PGVTDVLYPGRGGMLSFRLQD---EEWVNPFLKSLKLITFAESLGGVESFITYPATQTHADIPEEIRIANG  336 (366)
T ss_pred             HHHhC----CCeeEEecCCcCcEEEEEECC---HHHHHHHHHcCCcceEccCCCCCceEEECCcccccccCCHHHHHhcC
Confidence            77664    2222 1234457777777642   122223333222          112333332                


Q ss_pred             -CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 -HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 -~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                       .++.+|++..    -|+++.+++.|+++++
T Consensus       337 i~~~~~R~svG----lE~~~dl~~dl~~al~  363 (366)
T PRK08247        337 VCNRLLRFSVG----IENVEDLIADLKQAFK  363 (366)
T ss_pred             CCCCeEEEEec----cCCHHHHHHHHHHHHh
Confidence             2468999843    3667778888888876

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.64  E-value=4.8e-14  Score=129.60  Aligned_cols=216  Identities=16%  Similarity=0.169  Sum_probs=136.5

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-ccccccc-ccccccCCCCC
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGR-MLASDWEEVRP  122 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~-~~~~~~~~~~~  122 (306)
                      .|+++++++++++  +++++++...  +.|...+    +++|.++|++||+++|+|++|. |+...|. .....  +.+.
T Consensus       152 ~d~~~l~~~i~~~--~~k~v~~~~~--~~~~~~~----~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~~di  221 (416)
T PRK00011        152 IDYDEVEKLALEH--KPKLIIAGAS--AYSRPID----FKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--HADV  221 (416)
T ss_pred             cCHHHHHHHHHhc--CCCEEEECCC--cCCCccC----HHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--CCcE
Confidence            4799999999753  5677777532  3344556    9999999999999999999986 4322221 11111  2222


Q ss_pred             cEEEecccccCCcccceeeEeC-HHHHhhcCCCCccCCCCC-CHHHHHHHHHHH-HHHhh--ccHHHHHHHHHHHHHHHH
Q 021893          123 DMVILGKALGGGVIPVSAVLAD-KEVMLCIQPGEHGSTFGG-NPLASAVAIASL-DVIRD--EKLAERSAHLGEELRQHL  197 (306)
Q Consensus       123 d~~s~sK~~~~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~aa~~al-~~~~~--~~~~~~~~~~~~~l~~~L  197 (306)
                      -+.|++|++ +|. +.|+++++ +++++.+........+.. ....++++..++ +...+  ++..++++++++++++.|
T Consensus       222 ~~~S~~K~l-~g~-~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L  299 (416)
T PRK00011        222 VTTTTHKTL-RGP-RGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEAL  299 (416)
T ss_pred             EEecCCcCC-CCC-CceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence            244788998 456 88889885 688777654322222222 222333333333 32221  346778888888888888


Q ss_pred             HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc----C------CCCEEEEeCCC----CCCH
Q 021893          198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP----T------HDTIVRLTPPL----SISS  263 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~------~~~~lRi~~~~----~~t~  263 (306)
                      ++.+..    +......+.++++.+++.  ..+..++.+.|.++||.+..    .      .++.+|++...    ..++
T Consensus       300 ~~~g~~----~~~~~~~~~~~~i~~~~~--~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~  373 (416)
T PRK00011        300 AERGFR----VVSGGTDNHLVLVDLRSK--GLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKE  373 (416)
T ss_pred             HhCCCe----eeecCCCCeEEEEeCccc--CCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCH
Confidence            875311    111112346667766531  22456788999999999973    1      24568986432    4679


Q ss_pred             HHHHHHHHHHHHHHh
Q 021893          264 NELQEGSKALHDVLE  278 (306)
Q Consensus       264 ~~i~~~~~~l~~~l~  278 (306)
                      +|++.+++.|++++.
T Consensus       374 ~di~~l~~~l~~~~~  388 (416)
T PRK00011        374 AEMKEIAELIADVLD  388 (416)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999998887

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.64  E-value=3.1e-14  Score=132.03  Aligned_cols=207  Identities=22%  Similarity=0.270  Sum_probs=132.4

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE--ehhhhcccccccccccccCCCCCc
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA--DEIQSGLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~--De~~~g~~~~g~~~~~~~~~~~~d  123 (306)
                      |+++++++++   +++++|+++++ +++|.+.+    +++|.++|+++|+++++  |.+..|.     .....  ....|
T Consensus       193 d~~~l~~~i~---~~t~~v~l~~p-n~tG~v~~----l~~I~~~a~~~~~~~iv~~d~~~~g~-----~~~~~--~~~~D  257 (447)
T PRK00451        193 DLEALEAAVD---DDTAAVVVQYP-NFFGVIED----LEEIAEIAHAGGALFIVGVDPVSLGL-----LKPPG--EYGAD  257 (447)
T ss_pred             CHHHHHHhcC---CCeEEEEEECC-CCCCeeCC----HHHHHHHHHHCCCEEEEEcChHHhcc-----CCCcc--cCCCC
Confidence            7899999887   57888888887 77898877    99999999999999998  5443222     11112  23456


Q ss_pred             EE-----Eeccccc-CCcccceeeEeCHHHHhhcCCC--------------------------CccCCC--CCCH-HHHH
Q 021893          124 MV-----ILGKALG-GGVIPVSAVLADKEVMLCIQPG--------------------------EHGSTF--GGNP-LASA  168 (306)
Q Consensus       124 ~~-----s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~--------------------------~~~~~~--~~~~-~~~~  168 (306)
                      ++     ++||.+. +|+ ++||+++++++++.+.+.                          ....+.  +.+. +...
T Consensus       258 ~~~~s~~k~~~~~~~~Gp-g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (447)
T PRK00451        258 IVVGEGQPLGIPLSFGGP-YLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNAL  336 (447)
T ss_pred             EEEECCCcCCCCCCCCCC-CchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHH
Confidence            65     3456655 788 999999999988875221                          000111  1111 1112


Q ss_pred             HHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCcee
Q 021893          169 VAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA  245 (306)
Q Consensus       169 aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~  245 (306)
                      ++..+++.+.+   ++..+++.+++++++++|+++.    +..  +.....+..+.+.-   +.+..+++++|.++|+.+
T Consensus       337 aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~----g~~--~~~~~~~~~~~v~~---~~~~~~~~~~L~~~gi~~  407 (447)
T PRK00451        337 AAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIG----GVE--LFDGPFFNEFVVRL---PKPAEEVNEALLEKGILG  407 (447)
T ss_pred             HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcC----CEE--ecCCCeEEEEEEec---CCCHHHHHHHHHhcCCCC
Confidence            33334444433   3456777788888888887752    111  11212222211221   124678999999998774


Q ss_pred             c----c---CCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          246 K----P---THDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       246 ~----~---~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      .    +   ...+.+|++++..+|+++++++++.|++++
T Consensus       408 ~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~  446 (447)
T PRK00451        408 GYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL  446 (447)
T ss_pred             CcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence            3    1   124689999988899999999999998765

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.64  E-value=5.5e-15  Score=134.71  Aligned_cols=219  Identities=15%  Similarity=0.134  Sum_probs=141.5

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc--CCEEEEehhhhccccccccccccc
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--NILMIADEIQSGLARSGRMLASDW  117 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~--gi~li~De~~~g~~~~g~~~~~~~  117 (306)
                      .+++..|+++++++++   +++++|+++.++|++|.+.+    +++|.++|+++  |+++|+||+|... ..+...   .
T Consensus       132 ~~vd~~d~e~l~~~i~---~~tklI~iesP~NPtG~v~d----l~~I~~la~~~~~~i~livDea~~~~-~~~~~l---~  200 (400)
T PRK06234        132 TFVDTSNLEEVRNALK---ANTKVVYLETPANPTLKVTD----IKAISNIAHENNKECLVFVDNTFCTP-YIQRPL---Q  200 (400)
T ss_pred             EEECCCCHHHHHHHhc---cCCeEEEEECCCCCCCCcCC----HHHHHHHHHhcCCCCEEEEECCCCch-hcCCch---h
Confidence            5566678999999997   57899999999999999888    99999999997  9999999999732 111111   1


Q ss_pred             CCCCCcEEEecccccC-Cccc-ceeeEeCHHHHhhcCCC--CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893          118 EEVRPDMVILGKALGG-GVIP-VSAVLADKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL  193 (306)
Q Consensus       118 ~~~~~d~~s~sK~~~~-G~~~-~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l  193 (306)
                      ++.+..+.|++|.++| |. + .||+++++++++.++..  ....+...++.....+...++.+..  ..++..++...+
T Consensus       201 ~g~Divv~S~sK~l~g~g~-~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~tl~~--r~~~~~~na~~~  277 (400)
T PRK06234        201 LGADVVVHSATKYLNGHGD-VIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKTLQI--RMEKHCKNAMKV  277 (400)
T ss_pred             hCCcEEEeeccccccCCCC-ceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCcHHH--HHHHHHHHHHHH
Confidence            1333334488899984 76 5 48999999888877532  1122344566666666666654432  345556677777


Q ss_pred             HHHHHHHHh----hCCCc---------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC------------
Q 021893          194 RQHLFKIQQ----QFPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------------  248 (306)
Q Consensus       194 ~~~L~~~~~----~~~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------------  248 (306)
                      .+.|+....    .+|+.         .....+.|.++.|.+...  ......|.+.|.--++.++-+            
T Consensus       278 a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~--~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~  355 (400)
T PRK06234        278 AKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGG--VEEGKVVMNNVKLATLAVSLGDAETLIQHPASM  355 (400)
T ss_pred             HHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCc--HHHHHHHHHhCCcceEeccCCCCCceecCCccC
Confidence            777765321    11110         011235678888888631  233456766665443332211            


Q ss_pred             ---------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 ---------------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 ---------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                     .++.+|++..+    ||.+.+++.|+++++
T Consensus       356 ~~~~~~~~~~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~  396 (400)
T PRK06234        356 THSPYTAEERKEAGISDGLVRLSVGL----EDVDDIIADLKQALD  396 (400)
T ss_pred             CCCCCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHH
Confidence                           24789999543    566777777777776

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=99.64  E-value=8.6e-15  Score=133.54  Aligned_cols=232  Identities=16%  Similarity=0.150  Sum_probs=142.8

Q ss_pred             CHHHHHHHHHhc-CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc----c------cccccccc
Q 021893           46 DITALEKIFKES-GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG----L------ARSGRMLA  114 (306)
Q Consensus        46 d~~~le~~i~~~-~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g----~------~~~g~~~~  114 (306)
                      |++.||+.|+++ .+++++|+++.++|++|..+.+.+.+++|.++|++||++||+|+++..    |      ++.+..+ 
T Consensus       137 D~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si-  215 (431)
T cd00617         137 DVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSI-  215 (431)
T ss_pred             CHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCH-
Confidence            899999999864 245888999888887744667899999999999999999999999751    1      1111111 


Q ss_pred             cccCCCCCcEEEeccccc-CCc----cc-ceeeEeCH-HHHhhcCCCC----ccCCCCC-CHHHHHHHHHHHHHHhhccH
Q 021893          115 SDWEEVRPDMVILGKALG-GGV----IP-VSAVLADK-EVMLCIQPGE----HGSTFGG-NPLASAVAIASLDVIRDEKL  182 (306)
Q Consensus       115 ~~~~~~~~d~~s~sK~~~-~G~----~~-~g~~~~~~-~~~~~~~~~~----~~~~~~~-~~~~~~aa~~al~~~~~~~~  182 (306)
                         .++...+.++||.+. .|+    .+ .||+++++ +++++++...    ...++.+ +.....+...+++...+.+.
T Consensus       216 ---~ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~  292 (431)
T cd00617         216 ---AEIAREMFSYADGCTMSAKKDGLVNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDY  292 (431)
T ss_pred             ---HHHHHHhhccCCEEEEEeecCCCCccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcccHHH
Confidence               011112233333333 222    02 33688875 5888776321    1112222 22333333335554322233


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-----ChhhHHHHHHHHHHC-CceeccC--------
Q 021893          183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----LPVSAYDICLKMKER-GILAKPT--------  248 (306)
Q Consensus       183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-----~~~~~~~~~~~l~~~-Gi~~~~~--------  248 (306)
                      .++..+.++++.+.|++.+     +....+..|++++++...-.     ....+.+|+..|+++ ||.+...        
T Consensus       293 l~~~~~~r~~l~~~L~~~G-----~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~  367 (431)
T cd00617         293 LRHRVEQVRYLGDRLDEAG-----VPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRD  367 (431)
T ss_pred             HHHHHHHHHHHHHHHHHCC-----CCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccC
Confidence            4444445577878888774     33345667788888866310     012477888777655 7875421        


Q ss_pred             ---------CCCEEEEeCCC-CCCHHHHHHHHHHHHHHHhhhcCCCCCC
Q 021893          249 ---------HDTIVRLTPPL-SISSNELQEGSKALHDVLELDLPKMRKP  287 (306)
Q Consensus       249 ---------~~~~lRi~~~~-~~t~~~i~~~~~~l~~~l~~~~~~~~~~  287 (306)
                               .-..+|+..+. ..|.++++.+.++|..+++ .-..+++-
T Consensus       368 ~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~-~~~~~~~~  415 (431)
T cd00617         368 PNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYE-RREDIRGL  415 (431)
T ss_pred             CCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHh-hHhhCCCe
Confidence                     13689999875 6699999999999999988 55544433

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.64  E-value=5.6e-15  Score=134.34  Aligned_cols=222  Identities=13%  Similarity=0.110  Sum_probs=143.2

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE  119 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~  119 (306)
                      .+++..|++.++++|+   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+|++|+.+. ....  . .++
T Consensus       132 ~~vd~~d~e~l~~~i~---~~tklV~ie~p~NPtg~v~d----l~~I~~la~~~gi~livD~t~a~~~-~~~~--l-~~~  200 (398)
T PRK08249        132 TLCETGDHEQIEAEIA---KGCDLLYLETPTNPTLKIVD----IERLAAAAKKVGALVVVDNTFATPI-NQNP--L-ALG  200 (398)
T ss_pred             EEcCCCCHHHHHHhcC---CCCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCcCccc-cCCc--h-hhC
Confidence            4455678999999997   57899999999999999988    9999999999999999999998321 1111  1 122


Q ss_pred             CCCcEEEecccccC-Ccccc-eeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Q 021893          120 VRPDMVILGKALGG-GVIPV-SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHL  197 (306)
Q Consensus       120 ~~~d~~s~sK~~~~-G~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L  197 (306)
                      .+..+.|++|.++| |- ++ |++++++++++.++..........++..+..+...++.+..  ..++..++.+.+.+.|
T Consensus       201 ~Divv~S~sK~l~g~~~-~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~tL~~--R~~~~~~na~~la~~L  277 (398)
T PRK08249        201 ADLVIHSATKFLSGHAD-ALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGMKTLKL--RVRQQQESAMALAKYL  277 (398)
T ss_pred             CCEEeccCceecCCCCC-ceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcchHHH--HHHHHHHHHHHHHHHH
Confidence            23334478899985 54 44 67777888887776543434445667777777777766643  2456667777777777


Q ss_pred             HHHH----hhCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHH--HCCceec--------cC------
Q 021893          198 FKIQ----QQFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMK--ERGILAK--------PT------  248 (306)
Q Consensus       198 ~~~~----~~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~--~~Gi~~~--------~~------  248 (306)
                      ++..    -.+|+..         ....+.|.++.|++...  ......|++.|.  ..++-.+        |.      
T Consensus       278 ~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~--~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~  355 (398)
T PRK08249        278 QTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGG--MDTVKRLLPKLRYAHRAANLGAVETIYGPARTTSHVE  355 (398)
T ss_pred             HcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCC--HHHHHHHHHhCCcceEccCCCCCCceeeCCccccccc
Confidence            7532    1112110         12245688889988631  223445555553  2222111        10      


Q ss_pred             -----------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          249 -----------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       249 -----------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                                 .++.+|++..    -||.+.+++.|+++++ .++
T Consensus       356 ~~~~~~~~~gi~~~liR~svG----lE~~~dl~~dl~~al~-~~~  395 (398)
T PRK08249        356 NTLEERAALGIPEGLVRISVG----IEDTEDLIADLEQAFA-HLE  395 (398)
T ss_pred             CCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHH-Hhh
Confidence                       2478999944    3567777888887777 543

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.64  E-value=1.4e-14  Score=134.14  Aligned_cols=216  Identities=18%  Similarity=0.182  Sum_probs=140.6

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |+++|+++++++  +++++++.  ++.+|...+    +++|.++|+++|+++++|++|+ |....+ .+..+..  ..|+
T Consensus       170 d~~~L~~~l~~~--~~~lvi~~--~s~~g~~~d----i~~I~~i~~~~ga~l~vDaaq~~G~i~~~-~~~~~~~--~~D~  238 (452)
T PTZ00094        170 DYDKLEELAKAF--RPKLIIAG--ASAYPRDID----YKRFREICDSVGAYLMADIAHTSGLVAAG-VLPSPFP--YADV  238 (452)
T ss_pred             CHHHHHHHHHHh--CCCEEEEe--CCCCCCccC----HHHHHHHHHHcCCEEEEeccchhccccCC-CCCCCCC--CCcE
Confidence            899999999753  34555552  345788888    9999999999999999999998 431111 1111212  4676


Q ss_pred             EEe--cccccCCcccceeeEeCHHHHhhcCCC----Cc-cCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHH
Q 021893          125 VIL--GKALGGGVIPVSAVLADKEVMLCIQPG----EH-GSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELR  194 (306)
Q Consensus       125 ~s~--sK~~~~G~~~~g~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~  194 (306)
                      +++  .|+++|.. + |++++++++.+.+.+.    .. ....+.+....++..++++.+..   +++.+++.++.++++
T Consensus       239 l~~S~hK~l~GP~-G-g~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~  316 (452)
T PTZ00094        239 VTTTTHKSLRGPR-S-GLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALA  316 (452)
T ss_pred             EEcCCccCCCCCC-c-eEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHH
Confidence            654  49997654 4 6677766543322111    11 11113456677777788888854   346788888889988


Q ss_pred             HHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc----C-----CCCEEEEeCCCCCC---
Q 021893          195 QHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP----T-----HDTIVRLTPPLSIS---  262 (306)
Q Consensus       195 ~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~-----~~~~lRi~~~~~~t---  262 (306)
                      +.|.+.+..    +...........+.+..  .+.+..++...|.++||.+..    +     .+++||++++..++   
T Consensus       317 ~~L~~~g~~----v~~~~~~~~~~~v~~~~--~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~  390 (452)
T PTZ00094        317 AALEKRGYD----LVTGGTDNHLVLVDLRP--FGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGA  390 (452)
T ss_pred             HHHHhCCcE----EecCCCCCceEeecCCc--CCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCC
Confidence            888774211    11101112233433432  134567788888778999952    1     24789999977766   


Q ss_pred             -HHHHHHHHHHHHHHHhhhc
Q 021893          263 -SNELQEGSKALHDVLELDL  281 (306)
Q Consensus       263 -~~~i~~~~~~l~~~l~~~~  281 (306)
                       ++|++.+++.|.+++. ..
T Consensus       391 ~~~di~~l~~~l~~~~~-~~  409 (452)
T PTZ00094        391 KEKDFKFVADFLDRAVK-LA  409 (452)
T ss_pred             CHHHHHHHHHHHHHHHH-HH
Confidence             9999999999999987 53

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.63  E-value=3.7e-15  Score=135.41  Aligned_cols=220  Identities=15%  Similarity=0.141  Sum_probs=135.5

Q ss_pred             cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893           39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE  118 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~  118 (306)
                      +.+++.+|+++++++++   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+|+++... ....++   ..
T Consensus       128 v~~vd~~d~~~l~~~i~---~~tklV~ie~p~NptG~v~d----l~~I~~la~~~gi~livD~t~~~~-~~~~pl---~~  196 (390)
T PRK08133        128 TTFVDLTDLDAWRAAVR---PNTKLFFLETPSNPLTELAD----IAALAEIAHAAGALLVVDNCFCTP-ALQQPL---KL  196 (390)
T ss_pred             EEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCCccc-ccCCch---hh
Confidence            45667778999999987   57999999999999999888    999999999999999999998621 011111   12


Q ss_pred             CCCCcEEEecccccC-Ccccc-eeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 021893          119 EVRPDMVILGKALGG-GVIPV-SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQH  196 (306)
Q Consensus       119 ~~~~d~~s~sK~~~~-G~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~  196 (306)
                      +.+..+.|++|.++| |. ++ |+++.+++.++.+...........++..+..++..++.+..  ..++..++...+.+.
T Consensus       197 g~Divv~S~sK~~~g~g~-~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl~tl~~--R~~~~~~~a~~la~~  273 (390)
T PRK08133        197 GADVVIHSATKYLDGQGR-VLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWVFLKGLETLSL--RMEAHSANALALAEW  273 (390)
T ss_pred             CCcEEEeecceeecCCcc-eEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHHHHcccchHHH--HHHHHHHHHHHHHHH
Confidence            322334478899984 76 76 56777877766554322223333455555555555544433  234455666666666


Q ss_pred             HHHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHH--HCCceec--------cC-----
Q 021893          197 LFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMK--ERGILAK--------PT-----  248 (306)
Q Consensus       197 L~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~--~~Gi~~~--------~~-----  248 (306)
                      |++...    .+|+..         ....+.|.++.|++...  ......|.+.|.  ..++-.+        |.     
T Consensus       274 L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~--~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~~~  351 (390)
T PRK08133        274 LEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGG--REAAWRVIDATRLISITANLGDTKTTITHPATTTHG  351 (390)
T ss_pred             HHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCC--HHHHHHHHHhCCcceEeccCCCcceeeecCCCCCcc
Confidence            665421    111100         02346688899988531  223445555543  2221111        10     


Q ss_pred             ------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 ------------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 ------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                  .++.||++..    -|+.+.+++-|+++|+
T Consensus       352 ~~~~~~~~~~gi~~~liR~svG----lE~~~dl~~dl~~al~  389 (390)
T PRK08133        352 RLSPEARAAAGITEGLIRVAVG----LEDVADIKADLARGLA  389 (390)
T ss_pred             cCCHHHHHhcCCCCCeEEEEeC----cCCHHHHHHHHHHHhh
Confidence                        2578999944    3567778888877765

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.63  E-value=4.3e-15  Score=134.66  Aligned_cols=216  Identities=16%  Similarity=0.194  Sum_probs=137.9

Q ss_pred             cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893           39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE  118 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~  118 (306)
                      +.+++.+|++++++.++   +++++|+++.++|++|...+    +++|.++|+++|+++|+|++|+... ...     ..
T Consensus       121 v~~v~~~d~~~l~~~i~---~~tklV~le~p~np~g~~~d----l~~I~~la~~~gi~livD~a~~~~~-~~~-----pl  187 (380)
T TIGR01325       121 VSFVDPTDLNAWEAAVK---PNTKLVFVETPSNPLGELVD----IAALAELAHAIGALLVVDNVFATPV-LQQ-----PL  187 (380)
T ss_pred             EEEECCCCHHHHHHhcC---CCceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCcccc-cCC-----ch
Confidence            45667778999998886   57899999999999999888    9999999999999999999997321 111     11


Q ss_pred             CCCCcEE--EecccccC-Ccccc-eeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 021893          119 EVRPDMV--ILGKALGG-GVIPV-SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELR  194 (306)
Q Consensus       119 ~~~~d~~--s~sK~~~~-G~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~  194 (306)
                      ...+|++  |++|.++| |. ++ |++++++++++.++..........++..+..+...++.+..  ..++..++++.+.
T Consensus       188 ~~g~Divv~S~sK~l~g~g~-~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~~--r~~~~~~~a~~la  264 (380)
T TIGR01325       188 KLGADVVVYSATKHIDGQGR-VMGGVIAGSEELMAEVAVYLRHTGPAMSPFNAWVLLKGLETLSL--RMQKQFDSALAIA  264 (380)
T ss_pred             hhCCCEEEeeccceecCCCC-eEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHHHHHHhccCcHHH--HHHHHHHHHHHHH
Confidence            2345655  78899985 66 55 67888888877766432222333445555555555555543  2556666777777


Q ss_pred             HHHHHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC--Ccee--------ccC---
Q 021893          195 QHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKER--GILA--------KPT---  248 (306)
Q Consensus       195 ~~L~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~--Gi~~--------~~~---  248 (306)
                      +.|++...    .+|...         ....+.|.++.|.+..   ......|.+.|.=-  +.-.        .|.   
T Consensus       265 ~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~---~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~  341 (380)
T TIGR01325       265 EWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVAD---RAAAWKVLDAVELVSITNNLGDAKSTITHPATTT  341 (380)
T ss_pred             HHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECC---HHHHHHHHHcCCcceEcccCCCCCeeeeCCCccC
Confidence            77776421    122110         1123568888998862   33455666655322  2111        110   


Q ss_pred             --------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          249 --------------HDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       249 --------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                                    .++.||++..    -||.+.+++.|++++
T Consensus       342 ~~~~~~~~~~~~gi~~~liR~svG----lE~~~dl~~dl~~al  380 (380)
T TIGR01325       342 HGRMQPEERAAAGIGDGLVRLSVG----LEDVDDLIADLKRAL  380 (380)
T ss_pred             cccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHhhC
Confidence                          2478999944    356677777776653

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.63  E-value=3e-14  Score=128.35  Aligned_cols=211  Identities=14%  Similarity=0.183  Sum_probs=132.8

Q ss_pred             CCHHHHHHHHHhcCCcEEEEE-EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc
Q 021893           45 GDITALEKIFKESGDQIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~-v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d  123 (306)
                      .|++++|++|+   ++|++++ ++.+++++|...+    +++|.++|++||+++|+|++|+.-   ..  ....++  .|
T Consensus       136 ~d~~~le~ai~---~~t~ai~~v~~~~~~~g~~~~----~~~i~~~a~~~gi~vivD~a~~~~---~~--~~~~~g--~D  201 (363)
T TIGR01437       136 CSAEQLEAAIT---EKTAAILYIKSHHCVQKSMLS----VEDAAQVAQEHNLPLIVDAAAEED---LQ--KYYRLG--AD  201 (363)
T ss_pred             CCHHHHHHhcC---hhceEEEEEecCCCCcCCcCC----HHHHHHHHHHcCCeEEEECCCCCc---hH--HHHHcC--CC
Confidence            58999999998   4666655 5666777887888    999999999999999999999711   11  011223  46


Q ss_pred             EE--EecccccCCcccceeeEeCHHHHhhcCCCCccC--CCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHH
Q 021893          124 MV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS--TFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHL  197 (306)
Q Consensus       124 ~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L  197 (306)
                      ++  |++|.++ |+ +.|+++.++++++.++...+..  .+......+++..++++.+.+  .+..+...++.+.++++|
T Consensus       202 ~~~~S~~K~l~-gp-~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L  279 (363)
T TIGR01437       202 LVIYSGAKAIE-GP-TSGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEAL  279 (363)
T ss_pred             EEEEeCCcccC-CC-ceEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHH
Confidence            55  5569885 55 7888888888887664322111  111122334555556666544  223334444555677777


Q ss_pred             HHHHhhCCCceeeEE--Eeee---EEEEEEecCCChhhHHHHHHHHHHCC--ceecc--CCCCEEEEeCCCCCCHHHHHH
Q 021893          198 FKIQQQFPNYVKEVR--GRGL---FNAVEFDKTALPVSAYDICLKMKERG--ILAKP--THDTIVRLTPPLSISSNELQE  268 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~--~~g~---~~~i~~~~~~~~~~~~~~~~~l~~~G--i~~~~--~~~~~lRi~~~~~~t~~~i~~  268 (306)
                      +++.    ++....+  ..+.   ...+.+.....+.+..++.+.|.++|  |.+++  ...+.+|+.+.. ++++|++.
T Consensus       280 ~~i~----g~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~-~~~~e~~~  354 (363)
T TIGR01437       280 NTLK----GVSASIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRS-VTGGQLDI  354 (363)
T ss_pred             hcCC----CeEEEEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeec-CCHHHHHH
Confidence            7652    1211111  1111   12233332112456889999999877  66664  357789999875 56999999


Q ss_pred             HHHHHHHH
Q 021893          269 GSKALHDV  276 (306)
Q Consensus       269 ~~~~l~~~  276 (306)
                      ++++|+++
T Consensus       355 ~~~~l~~~  362 (363)
T TIGR01437       355 IVERIREI  362 (363)
T ss_pred             HHHHHHHh
Confidence            99999875

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.62  E-value=1.4e-13  Score=128.31  Aligned_cols=222  Identities=17%  Similarity=0.156  Sum_probs=145.0

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|+++|+++++   +++++|+++.++ ++|.+   .+-+++|.++|+++|+++++|+++. .+..|. ....  .+..|+
T Consensus       196 ~D~e~L~~~i~---~~t~~V~v~~Pn-~tG~~---~~dl~eI~~~a~~~gal~iVD~a~~-~~~~g~-~~~~--~~GaD~  264 (481)
T PRK04366        196 VDLEALKAAVG---EDTAALMLTNPN-TLGLF---ERNILEIAEIVHEAGGLLYYDGANL-NAILGK-ARPG--DMGFDV  264 (481)
T ss_pred             cCHHHHHhhcc---cCCeEEEEeCCC-Ccccc---chHHHHHHHHHHHcCCEEEEEecCh-hhhccc-CCcc--ccCCCE
Confidence            47899999887   468888887665 67754   1229999999999999999999985 111222 1122  234576


Q ss_pred             EEe--ccccc-----CCcccceeeEeCHHHHhhcCCCC-------------------ccCCCCCCHHHHHHHHHHHHHHh
Q 021893          125 VIL--GKALG-----GGVIPVSAVLADKEVMLCIQPGE-------------------HGSTFGGNPLASAVAIASLDVIR  178 (306)
Q Consensus       125 ~s~--sK~~~-----~G~~~~g~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~aa~~al~~~~  178 (306)
                      +++  .|+++     ||. .+|++++++++.+.+.+..                   ..-.++++.+.+.++...+..+.
T Consensus       265 ~~~~~hK~l~~P~g~Ggp-~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G  343 (481)
T PRK04366        265 VHLNLHKTFSTPHGGGGP-GSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLG  343 (481)
T ss_pred             EEEechhhcCCCCCCCCC-CeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHH
Confidence            644  49887     455 6788888888776653210                   01112234456666666666666


Q ss_pred             hccH---HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec-CCChhhHHHHHHHHHHCCceecc----C-C
Q 021893          179 DEKL---AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK-TALPVSAYDICLKMKERGILAKP----T-H  249 (306)
Q Consensus       179 ~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~~~~~~l~~~Gi~~~~----~-~  249 (306)
                      .+++   .++...+.++++++|+++ ..   ........ ....+.... ...+.+..++.+.|.++|+.+..    . .
T Consensus       344 ~~Gl~~~a~~~~~~a~~l~~~L~~~-~~---~~~~~~~~-~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~  418 (481)
T PRK04366        344 AEGLREVSEDAVLNANYLKARLKDI-YD---LPYDRPCM-HEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPLIV  418 (481)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhh-Cc---ccCCCCee-EEEEEECccccccCCCHHHHHHHHHHCCccCCcccccccc
Confidence            5543   455677788999999887 22   22111110 111222110 00124678899999999998762    1 2


Q ss_pred             CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCCC
Q 021893          250 DTIVRLTPPLSISSNELQEGSKALHDVLELDLPKM  284 (306)
Q Consensus       250 ~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~~  284 (306)
                      .+.+|+++...+|++||+.+++.|+++.+ +..+.
T Consensus       419 ~~~l~is~~e~~t~edid~l~~~l~~i~~-~~~~~  452 (481)
T PRK04366        419 PEALMIEPTETESKETLDAFIAAMKQIAE-EAKEN  452 (481)
T ss_pred             CCeEEEcccCCCCHHHHHHHHHHHHHHHH-HHHhC
Confidence            56899999999999999999999999988 76553

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=99.62  E-value=1.1e-13  Score=117.04  Aligned_cols=216  Identities=20%  Similarity=0.255  Sum_probs=163.0

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc--
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD--  123 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d--  123 (306)
                      ++.++++.++   +++++|++++++..||...+    +.+|..+++++|+++++|-+|+    .|. ++.+......|  
T Consensus       155 ~P~~~~~~~~---dd~AvV~L~~V~y~TGql~d----m~aiT~~AH~~galv~wDLAHs----aGa-vp~~Lh~~gaDfa  222 (407)
T COG3844         155 APRALEEAIT---DDVAVVLLSHVNYKTGQLLD----MRAITALAHQHGALVGWDLAHS----AGA-VPVDLHAAGADFA  222 (407)
T ss_pred             ChHHHHHhhc---cceEEEEeccccccccceee----HHHHHHHHHhcCceEEeehhcc----cCC-cceeecccCCCee
Confidence            5668888888   68999999999999999999    9999999999999999999998    222 22343334445  


Q ss_pred             EEEecccccCCcccceeeEeCHHHHhhcCCC--------------------CccCCC---CCCHHHHHHHHHHHHHHhh-
Q 021893          124 MVILGKALGGGVIPVSAVLADKEVMLCIQPG--------------------EHGSTF---GGNPLASAVAIASLDVIRD-  179 (306)
Q Consensus       124 ~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~--------------------~~~~~~---~~~~~~~~aa~~al~~~~~-  179 (306)
                      +.|.-|.+.||....+++.+.++..+...+.                    .....|   +.+..++++...+|+...+ 
T Consensus       223 igcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~  302 (407)
T COG3844         223 IGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADV  302 (407)
T ss_pred             eeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhc
Confidence            4577799997664566777766654443221                    111111   2344577777788888765 


Q ss_pred             --ccHHHHHHHHHHHHHHHHHHHHhhCCCcee-e---EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEE
Q 021893          180 --EKLAERSAHLGEELRQHLFKIQQQFPNYVK-E---VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIV  253 (306)
Q Consensus       180 --~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~---~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~l  253 (306)
                        .+++++.-.+.+++.+.++..+..++ ... .   -...|..+.+..+      +..++++.|.++||+..-..++.+
T Consensus       303 ~i~~lR~kSlaLTd~fieLvEa~~~~~~-l~l~tPr~~~~rGsqvS~~hp------~~~~V~qaLi~rGVigD~R~P~vl  375 (407)
T COG3844         303 DITELRKKSLALTDYFIELVEARCEYYG-LTLVTPRAHEERGSQVSLYHP------HGYQVMQALIDRGVIGDFREPDVL  375 (407)
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhccccCC-cEEeccchhhhccceeeEecC------cHHHHHHHHHHcCccccccCCCee
Confidence              45778888899999999998887553 222 1   2246777777665      578899999999999998889999


Q ss_pred             EEeC-CCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          254 RLTP-PLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       254 Ri~~-~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      |+.+ +++++-+|+-.+++.|.++++ ..
T Consensus       376 RfgftPlY~~~~DVw~AV~~L~evL~-t~  403 (407)
T COG3844         376 RFGFTPLYVSFVDVWDAVDALEEVLD-TL  403 (407)
T ss_pred             eecCccceechhHHHHHHHHHHHHHH-hh
Confidence            9999 689999999999999999998 54

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.62  E-value=6.3e-15  Score=134.15  Aligned_cols=219  Identities=16%  Similarity=0.157  Sum_probs=138.5

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE  119 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~  119 (306)
                      ..++..|+++++++++   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+|++|+... ....  . .++
T Consensus       133 ~~vd~~d~e~l~~ai~---~~tklV~lesp~NptG~v~d----l~~I~~la~~~gi~lvvD~a~a~~~-~~~~--~-~~g  201 (398)
T PRK07504        133 TLVDGLDLDNWEKAVR---PNTKVFFLESPTNPTLEVID----IAAVAKIANQAGAKLVVDNVFATPL-FQKP--L-ELG  201 (398)
T ss_pred             EEECCCCHHHHHHhcC---cCceEEEEECCCCCCcEecC----HHHHHHHHHHcCCEEEEECCccccc-cCCc--h-hhC
Confidence            4445578999999887   57999999999999999988    9999999999999999999997221 1111  1 123


Q ss_pred             CCCcEEEeccccc-CCcccce-eeEeCHHHHhh-cCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 021893          120 VRPDMVILGKALG-GGVIPVS-AVLADKEVMLC-IQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQH  196 (306)
Q Consensus       120 ~~~d~~s~sK~~~-~G~~~~g-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~  196 (306)
                      .+..+.|++|.++ .|. ++| +++.+++.+.+ ++..........++..++.++.+++.+..  ..++..++...+.+.
T Consensus       202 aDivv~S~sK~l~g~g~-~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~tl~~--R~~~~~~na~~la~~  278 (398)
T PRK07504        202 AHIVVYSATKHIDGQGR-CLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLKGLETLPV--RVRQQTESAAAIADF  278 (398)
T ss_pred             CCEEEeeccccccCCcc-ceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccchHHH--HHHHHHHHHHHHHHH
Confidence            3333447789998 487 886 66677765542 33211222334566777777777766644  245556777777777


Q ss_pred             HHHHH----hhCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----------cC-----
Q 021893          197 LFKIQ----QQFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----------PT-----  248 (306)
Q Consensus       197 L~~~~----~~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----------~~-----  248 (306)
                      |++..    ..+|+..         ....+.|.++.|++...  ......|++.|.=-.+.++          |.     
T Consensus       279 L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~--~~~~~~~~~~l~~~~~~~slG~~~sl~~~p~~~~~~  356 (398)
T PRK07504        279 LAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGG--KEAAFRFLNALKIVRISNNLGDAKSLITHPATTTHK  356 (398)
T ss_pred             HHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCC--HHHHHHHHHhCCcceecccCCCCCeeeeCCCCCCcc
Confidence            77532    1112111         12235688999998531  2334456555532222111          10     


Q ss_pred             ------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 ------------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 ------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                  .++.||++..+    ||.+.+++.|+++|+
T Consensus       357 ~~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~  394 (398)
T PRK07504        357 NLSPEARAELGISEGFLRLSAGL----EDTDDLIEDLAAALK  394 (398)
T ss_pred             cCCHHHHHhcCCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence                        25789999543    566777777777776

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.61  E-value=1.4e-14  Score=131.96  Aligned_cols=221  Identities=17%  Similarity=0.197  Sum_probs=137.1

Q ss_pred             cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893           39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE  118 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~  118 (306)
                      +.+++.+|+++++++++   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+|++|+.. ....+.   ..
T Consensus       137 v~~vd~~d~~~l~~ai~---~~tklV~~esp~Nptg~v~d----l~~I~~la~~~g~~vivD~a~a~~-~~~~~~---~~  205 (403)
T PRK07810        137 TVFVDGEDLSQWEEALS---VPTQAVFFETPSNPMQSLVD----IAAVSELAHAAGAKVVLDNVFATP-LLQRGL---PL  205 (403)
T ss_pred             EEEECCCCHHHHHHhcC---cCceEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCCcc-ccCChh---hc
Confidence            46667779999999997   57899999999999999988    999999999999999999999721 011111   12


Q ss_pred             CCCCcEEEecccccC-Ccccc-eeeEeCHHHHh-hcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893          119 EVRPDMVILGKALGG-GVIPV-SAVLADKEVML-CIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ  195 (306)
Q Consensus       119 ~~~~d~~s~sK~~~~-G~~~~-g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~  195 (306)
                      +.+..+.|++|.++| |. ++ |+++++++.+. .++..........++..+..++.+++.+..  ..++..++...+.+
T Consensus       206 gaDivv~S~tK~l~g~g~-~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~tl~~--R~~~~~~~a~~~a~  282 (403)
T PRK07810        206 GADVVVYSGTKHIDGQGR-VLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLETLAL--RVRHSNASALRIAE  282 (403)
T ss_pred             CCcEEEccCCceecCCcC-ceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHH
Confidence            333333477799985 66 65 67888877554 333221222334567777777777766544  25566666666767


Q ss_pred             HHHHHHh----hCCCce---------eeEEEeeeEEEEEEecCC--ChhhHHHHHHHHHHC----------CceeccC--
Q 021893          196 HLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTA--LPVSAYDICLKMKER----------GILAKPT--  248 (306)
Q Consensus       196 ~L~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~--~~~~~~~~~~~l~~~----------Gi~~~~~--  248 (306)
                      .|+....    .+|+..         ....+.|.++.+.+....  .......|++.|.=-          .++..|.  
T Consensus       283 ~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~  362 (403)
T PRK07810        283 FLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAFEVLDKLRVIDISNNLGDAKSLITHPATT  362 (403)
T ss_pred             HHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHHHHHHhCCceEEeccCCCCcceeeCCCcc
Confidence            7765421    111000         012256888899886310  012344555543211          1222221  


Q ss_pred             ---------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          249 ---------------HDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       249 ---------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                                     .++.+|++..    -|+.+.+++.|++++
T Consensus       363 ~h~~~~~~~~~~~gi~~~lvR~svG----lE~~~dli~dl~~Al  402 (403)
T PRK07810        363 THRAMGPEGRAAIGLGDGVVRLSVG----LEDTDDLIADLDRAL  402 (403)
T ss_pred             ccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHhh
Confidence                           2468999943    356777777777665

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.61  E-value=1.8e-13  Score=134.77  Aligned_cols=254  Identities=14%  Similarity=0.115  Sum_probs=171.4

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCccc
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVII   77 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~   77 (306)
                      +++|+..-+=||...+.....+            ..++.+|.     -|+++|+++++.+.+++++|++..+++.+|...
T Consensus       616 r~~vli~~~aH~sn~a~a~~~G------------~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~  683 (993)
T PLN02414        616 RNVCIIPVSAHGTNPASAAMCG------------MKIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEE  683 (993)
T ss_pred             CCEEEeCCCcCccCHHHHHHCC------------CEEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccc
Confidence            3567777788887665444322            12233333     289999999997656899999999999999888


Q ss_pred             CChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEec--cccc-----CCcccceeeEeCHHHHhh
Q 021893           78 PPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALG-----GGVIPVSAVLADKEVMLC  150 (306)
Q Consensus        78 ~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~s--K~~~-----~G~~~~g~~~~~~~~~~~  150 (306)
                      +    +++|.++|+++|+++++|.++.    .+.........+..|++.+|  |+|+     ||. .+|++.+++.++..
T Consensus       684 ~----I~eI~~iah~~Galv~vDgAq~----~a~~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGP-g~G~l~~~~~L~p~  754 (993)
T PLN02414        684 G----IDEICDIIHDNGGQVYMDGANM----NAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPF  754 (993)
T ss_pred             h----HHHHHHHHHHcCCEEEEEecCH----HhccCcCCccccCCCEEEecCCccCCcCcccCCC-CeeeEEEchhhccc
Confidence            8    9999999999999999999996    12211122234567877664  8776     576 79999999887655


Q ss_pred             cCCCC-----------c---cCCC----CCCHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHHHHHHhhCCCcee
Q 021893          151 IQPGE-----------H---GSTF----GGNPLASAVAIASLDVIRDEKL---AERSAHLGEELRQHLFKIQQQFPNYVK  209 (306)
Q Consensus       151 ~~~~~-----------~---~~~~----~~~~~~~~aa~~al~~~~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~  209 (306)
                      +-...           .   .++.    .++.+.+..+...++.+..+++   .++...+..+++++|++.. .   ..+
T Consensus       755 lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~-~---~~~  830 (993)
T PLN02414        755 LPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHY-P---VLF  830 (993)
T ss_pred             CCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhC-C---ccc
Confidence            43210           0   0111    1334556666666777766665   6777788889999998732 1   222


Q ss_pred             eEEEeee---EEEEEEecCC--ChhhHHHHHHHHHHCCceecc---CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          210 EVRGRGL---FNAVEFDKTA--LPVSAYDICLKMKERGILAKP---THDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       210 ~~~~~g~---~~~i~~~~~~--~~~~~~~~~~~l~~~Gi~~~~---~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ..+ .+.   -+.+.+...+  .+.+..++++.|.+.|+....   ...+.+|++|.-..+++|||++++++.++.. +.
T Consensus       831 ~~~-~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~-e~  908 (993)
T PLN02414        831 RGK-NGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRE-EI  908 (993)
T ss_pred             cCC-CCCeeeeEEEeccccccccCCCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHH-HH
Confidence            111 111   1122222111  124568899999998887542   1377899999999999999999999998888 76


Q ss_pred             CC
Q 021893          282 PK  283 (306)
Q Consensus       282 ~~  283 (306)
                      .+
T Consensus       909 ~~  910 (993)
T PLN02414        909 AD  910 (993)
T ss_pred             HH
Confidence            54

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=99.61  E-value=1.5e-14  Score=130.19  Aligned_cols=203  Identities=13%  Similarity=0.188  Sum_probs=138.0

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEec--ccccCCcc
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVI  136 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~  136 (306)
                      +++++|.+.+..+.+|.+.|    +++|   ++++|+++|+|.+++ +  .+..+..+  .  .|++.+|  |.+++-- 
T Consensus       127 ~~~~lV~~~h~et~tG~~~p----i~~I---~~~~g~~~iVDavqs-~--g~~~idv~--~--~D~~~~s~~K~lg~~~-  191 (361)
T TIGR01366       127 PGVDVIAWAHNETSTGVAVP----VRRP---EGSDDALVVIDATSG-A--GGLPVDIA--E--TDVYYFAPQKNFASDG-  191 (361)
T ss_pred             CCCCEEEEcccCCccceecc----cccc---cccCCCeEEEEcCcc-c--cCCCCCHH--H--CCEEEEEchhhcCCCC-
Confidence            57999999999999999988    7777   589999999999998 2  11222222  2  4766554  9998432 


Q ss_pred             cceeeEeCHHHHhhcCCCCc--------------------cCCC-CCCHHHHHHHHHHHHHHhhc----cHHHHHHHHHH
Q 021893          137 PVSAVLADKEVMLCIQPGEH--------------------GSTF-GGNPLASAVAIASLDVIRDE----KLAERSAHLGE  191 (306)
Q Consensus       137 ~~g~~~~~~~~~~~~~~~~~--------------------~~~~-~~~~~~~~aa~~al~~~~~~----~~~~~~~~~~~  191 (306)
                      .+++++.++++++++.+...                    ..+. +.+...+.+..++++.+.+.    ...++.+++.+
T Consensus       192 Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~  271 (361)
T TIGR01366       192 GLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSS  271 (361)
T ss_pred             ceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence            45566778988877653211                    1112 22333444667888888654    24577778888


Q ss_pred             HHHHHHHHHHhhCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCCCCCHHHH
Q 021893          192 ELRQHLFKIQQQFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLSISSNEL  266 (306)
Q Consensus       192 ~l~~~L~~~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i  266 (306)
                      ++++.+++....-+ ...... .......+.+++   +.+..++.+.|.++||.+.++    ..+.+|++++.++|.+|+
T Consensus       272 ~l~~~l~~~~~~~~-~~~~~~~~s~~v~~v~~~~---g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di  347 (361)
T TIGR01366       272 RLYSWAQERPYATP-FVTDPGKRSQVVGTIDFVD---DIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDV  347 (361)
T ss_pred             HHHHHHHhCCCccc-CCCChhhcccceEEEECCC---ccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHH
Confidence            88888888752110 111111 111223344432   467888999999999998765    256899999999999999


Q ss_pred             HHHHHHHHHHHhhhc
Q 021893          267 QEGSKALHDVLELDL  281 (306)
Q Consensus       267 ~~~~~~l~~~l~~~~  281 (306)
                      +.++++|+++++ ++
T Consensus       348 ~~l~~al~~~~~-~~  361 (361)
T TIGR01366       348 EALTECVDWVVE-RL  361 (361)
T ss_pred             HHHHHHHHHHHh-hC
Confidence            999999999887 53

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.60  E-value=2.4e-14  Score=129.73  Aligned_cols=220  Identities=15%  Similarity=0.128  Sum_probs=140.1

Q ss_pred             ccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCC
Q 021893           42 VDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR  121 (306)
Q Consensus        42 ~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~  121 (306)
                      ++..|++++++.++   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+||+|.... ....  . .++.+
T Consensus       122 vd~~d~e~l~~~l~---~~tklV~l~sP~NPtG~v~d----i~~I~~ia~~~g~~vivDeay~~~~-~~~p--l-~~gaD  190 (386)
T PRK08045        122 VDQGDEQALRAALA---EKPKLVLVESPSNPLLRVVD----IAKICHLAREAGAVSVVDNTFLSPA-LQNP--L-ALGAD  190 (386)
T ss_pred             eCCCCHHHHHHhcc---cCCeEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCCccc-cCCc--h-hhCCC
Confidence            34458899999887   47899999999999999888    9999999999999999999997321 1111  1 12333


Q ss_pred             CcEEEecccccC--CcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Q 021893          122 PDMVILGKALGG--GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLF  198 (306)
Q Consensus       122 ~d~~s~sK~~~~--G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~  198 (306)
                      ..+.|++|.++|  +. ..|+++. ++++.+.+.......+.+.+++.+..+..+++.+...  .++..++...+.+.|+
T Consensus       191 ivv~S~tK~l~G~~d~-~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~tl~~R--~~~~~~na~~la~~L~  267 (386)
T PRK08045        191 LVLHSCTKYLNGHSDV-VAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRTLVPR--MELAQRNAQAIVKYLQ  267 (386)
T ss_pred             EEEeecceeccCCCCc-eeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhccHHHH--HHHHHHHHHHHHHHHH
Confidence            334488899983  55 6787766 5777666653333344456777777777777655432  4566666677777776


Q ss_pred             HHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----------cC-------
Q 021893          199 KIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----------PT-------  248 (306)
Q Consensus       199 ~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----------~~-------  248 (306)
                      ....    .+|+..         ....+.|.++.|.+...  ......|++.|.=-.+.++          |.       
T Consensus       268 ~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~--~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~  345 (386)
T PRK08045        268 TQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD--EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGM  345 (386)
T ss_pred             cCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCc--HHHHHHHHHhccceeEeccCCCCceeEeCCCCcccccC
Confidence            5321    111110         12346788899988631  2234456655542211111          10       


Q ss_pred             ----------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          249 ----------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       249 ----------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                                .++.||++..+    |+.+.+++.|+++++ ...
T Consensus       346 ~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~-~~~  384 (386)
T PRK08045        346 APEARAAAGISETLLRISTGI----EDGEDLIADLENGFR-AAN  384 (386)
T ss_pred             CHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHH-Hhh
Confidence                      25789999543    567777777777777 543

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.58  E-value=3.9e-14  Score=129.05  Aligned_cols=182  Identities=16%  Similarity=0.178  Sum_probs=120.4

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE  119 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~  119 (306)
                      ..++..|++.++++++   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+|++|...    ..  .....
T Consensus       128 ~~v~~~d~~~l~~~i~---~~tklV~l~~P~NPtG~v~d----l~~I~~la~~~gi~vIvD~a~a~~----~~--~~pl~  194 (405)
T PRK08776        128 ITADLTDPRSLADALA---QSPKLVLIETPSNPLLRITD----LRFVIEAAHKVGALTVVDNTFLSP----AL--QKPLE  194 (405)
T ss_pred             EEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCCccc----cc--CCccc
Confidence            4455568999999887   47899999999999998877    999999999999999999999731    11  11112


Q ss_pred             CCCcEE--EecccccC--CcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 021893          120 VRPDMV--ILGKALGG--GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELR  194 (306)
Q Consensus       120 ~~~d~~--s~sK~~~~--G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~  194 (306)
                      +..|++  |.+|.++|  +. ..|+++. ++++.+++........+..+++.+.+....++++..  ..++..++...+.
T Consensus       195 ~gaDivv~S~tK~l~g~~~~-~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~tl~~--r~~~~~~na~~la  271 (405)
T PRK08776        195 FGADLVLHSTTKYINGHSDV-VGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGLRTLDA--RLRVHQENADAIA  271 (405)
T ss_pred             ccCCEEEecCceeecCCCCc-eEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhCcHHH--HHHHHHHHHHHHH
Confidence            334544  77799983  45 6777766 567766665333333445678888777777776643  4667777777777


Q ss_pred             HHHHHHHh----hCCCc---------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHH
Q 021893          195 QHLFKIQQ----QFPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMK  239 (306)
Q Consensus       195 ~~L~~~~~----~~~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~  239 (306)
                      +.|++...    .+|+.         .....+.|.++.|++...  ......|.+.|.
T Consensus       272 ~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~--~~~~~~f~~~l~  327 (405)
T PRK08776        272 ALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGG--EAAVRAFVDGLR  327 (405)
T ss_pred             HHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCC--HHHHHHHHHhCC
Confidence            77776421    11100         012246788999998631  223345555553

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.58  E-value=3.4e-14  Score=128.29  Aligned_cols=214  Identities=10%  Similarity=0.056  Sum_probs=135.3

Q ss_pred             CCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc
Q 021893           44 FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        44 ~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d  123 (306)
                      ..+.+.+++.++   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+|++|+.    |..+  ......+|
T Consensus       122 ~~~~e~l~~~i~---~~tklV~lesp~Np~g~~~d----l~~I~~la~~~g~~livD~t~a~----g~~~--~pl~~gaD  188 (377)
T TIGR01324       122 PLIGEDIATLIQ---PNTKVLFLEAPSSITFEIQD----IPAIAKAARNPGIVIMIDNTWAA----GLLF--KPLEHGVD  188 (377)
T ss_pred             CCCHHHHHHhcC---CCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCcc----cccc--CccccCce
Confidence            344478888887   57999999999999998887    99999999999999999999972    1111  12233456


Q ss_pred             EE--EecccccC--CcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Q 021893          124 MV--ILGKALGG--GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFK  199 (306)
Q Consensus       124 ~~--s~sK~~~~--G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~  199 (306)
                      ++  |++|.++|  +. ..|+++.+++.++.+...........++........+++.+...  .++..++...+.+.|++
T Consensus       189 ivv~S~tK~l~G~~d~-~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~tl~~R--~~~~~~~a~~la~~L~~  265 (377)
T TIGR01324       189 ISIQAGTKYLVGHSDI-MIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLRTLGVR--LKQHQESSLAIAKWLSE  265 (377)
T ss_pred             EEEecCceeccCCCCc-eEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhhHHHH--HHHHHHHHHHHHHHHHh
Confidence            55  66899984  45 67888888887776653222223344555555555666554332  45556666667777776


Q ss_pred             HHh----hCCCc---------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC------------------
Q 021893          200 IQQ----QFPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------------------  248 (306)
Q Consensus       200 ~~~----~~~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------------------  248 (306)
                      ...    .+|..         .....+.|.++.|.+.... ......|.+.|.-.++.++-+                  
T Consensus       266 ~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~-~~~~~~~~~~l~~~~~~~slG~~~sl~~~~~~~~~~~~~  344 (377)
T TIGR01324       266 QPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLT-QKQVHAFLDHLQLFGLGYSWGGYESLALCNQPELGHRPN  344 (377)
T ss_pred             CCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC-HHHHHHHHHhCCcceEeccCCCccceeecCCCCCCHHHH
Confidence            421    11110         0122356888899886311 234556777776543332211                  


Q ss_pred             -----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 -----HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 -----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                           .++.+|++..+    ||.+.+++-|.++++
T Consensus       345 ~~~~~~~~liR~svGl----E~~~dl~~dl~~al~  375 (377)
T TIGR01324       345 IKRNLEGPLIRVHIGL----ENVDDLKADLKAGFE  375 (377)
T ss_pred             HhccCCCCEEEEEeCC----CCHHHHHHHHHHHHh
Confidence                 23578998543    556677777777765

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.58  E-value=3e-14  Score=129.00  Aligned_cols=216  Identities=16%  Similarity=0.136  Sum_probs=137.7

Q ss_pred             cCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCC
Q 021893           43 DFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRP  122 (306)
Q Consensus        43 ~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~  122 (306)
                      +..|++.++++++   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+|++|..+... ..+   ..+.+.
T Consensus       122 d~~d~~~l~~ai~---~~tklV~l~~p~NPtG~~~d----l~~I~~la~~~g~~vvvD~a~~~~~~~-~pl---~~gaDi  190 (382)
T TIGR02080       122 DQGDEQALRAALA---QKPKLVLIETPSNPLLRVVD----IAKICHLAKAVGAVVVVDNTFLSPALQ-NPL---ALGADL  190 (382)
T ss_pred             CCCCHHHHHHhcC---cCceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCcccccC-Cch---hhCCCE
Confidence            3457899999887   46899999999999999888    999999999999999999999732111 111   123333


Q ss_pred             cEEEeccccc--CCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Q 021893          123 DMVILGKALG--GGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFK  199 (306)
Q Consensus       123 d~~s~sK~~~--~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~  199 (306)
                      .+.|++|.++  ++. +.|++.. ++++.+.+.......+.+.+++.+..++..++.+...  .++..++...+.+.|+.
T Consensus       191 vv~S~sK~l~G~~~~-~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~tl~~R--~~~~~~na~~~a~~L~~  267 (382)
T TIGR02080       191 VLHSCTKYLNGHSDV-IAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGLRTLVAR--MRLQQRNAQAIVEYLQT  267 (382)
T ss_pred             EEeecceeccCCCCc-eeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHcccchHHHH--HHHHHHHHHHHHHHHHh
Confidence            3448889997  366 7888766 5777776654334445556777777777666655443  44555666667777765


Q ss_pred             HH----hhCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----------cC--------
Q 021893          200 IQ----QQFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----------PT--------  248 (306)
Q Consensus       200 ~~----~~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----------~~--------  248 (306)
                      ..    -.+|...         ....+.|.++.|++...  ......|.+.|.=-.+.++          |.        
T Consensus       268 ~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~--~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~  345 (382)
T TIGR02080       268 QPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGG--EQTVRRFLGGLSLFTLAESLGGVESLIAHPATMTHAAMG  345 (382)
T ss_pred             CCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCc--HHHHHHHHHcCCcceEeccCCCCcceeECCCccCcccCC
Confidence            32    1111100         12245688899998631  1223455555432111111          10        


Q ss_pred             ---------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 ---------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 ---------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                               .++.||++..    -|+.+.+++.|+++++
T Consensus       346 ~~~~~~~gi~~~liRlsvG----lE~~~dl~~dl~~al~  380 (382)
T TIGR02080       346 PEARAEAGISDTLLRLSVG----LEDADDLIADLEQGLR  380 (382)
T ss_pred             HHHHHhcCCCcCeEEEEec----cCCHHHHHHHHHHHHh
Confidence                     2468999944    3567777888877776

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PRK05968 hypothetical protein; Provisional

Probab=99.58  E-value=4.9e-14  Score=128.03  Aligned_cols=215  Identities=16%  Similarity=0.062  Sum_probs=133.7

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE  119 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~  119 (306)
                      .+++.+|++++++.+.    ++++|+++.+.++.+...+    +++|.++|++||+++|+|++|+... .....   .++
T Consensus       131 ~~vd~~d~~~l~~~i~----~tklV~ie~pt~~~~~~~d----l~~i~~la~~~gi~vivD~a~a~~~-~~~p~---~~g  198 (389)
T PRK05968        131 DYVDGRDEEAVAKALP----GAKLLYLESPTSWVFELQD----VAALAALAKRHGVVTMIDNSWASPV-FQRPI---TLG  198 (389)
T ss_pred             EEeCCCCHHHHHHhcc----cCCEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCcchh-ccCch---hcC
Confidence            4456668999998873    5789999988777766655    9999999999999999999997321 11111   123


Q ss_pred             CCCcEEEecccccC--CcccceeeEeCHHHHhhcCCCCc-cCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 021893          120 VRPDMVILGKALGG--GVIPVSAVLADKEVMLCIQPGEH-GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQH  196 (306)
Q Consensus       120 ~~~d~~s~sK~~~~--G~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~  196 (306)
                      .+..+.|++|.++|  +. +.|+++.+++++++++.... ......++..+..+..+++.+..  ..++..++.+.+.+.
T Consensus       199 ~Divv~S~tK~l~g~~~~-~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~tl~~--r~~~~~~~a~~la~~  275 (389)
T PRK05968        199 VDLVIHSASKYLGGHSDT-VAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRTLPL--RMKAHEASALEIARR  275 (389)
T ss_pred             CcEEEeeccccccCCCCe-EEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCcHHH--HHHHHHHHHHHHHHH
Confidence            33334478899984  35 67888889888877653211 11233455666666666654422  244445556666666


Q ss_pred             HHHHHhhCCCceee----------EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec---------cC---------
Q 021893          197 LFKIQQQFPNYVKE----------VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK---------PT---------  248 (306)
Q Consensus       197 L~~~~~~~~~~~~~----------~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~---------~~---------  248 (306)
                      |+.....  ..+..          ..+.|.++.|.+..   .....+|++.|...++.++         |.         
T Consensus       276 L~~~p~v--~~v~~p~l~~~~~~~~~g~g~~~sf~~~~---~~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~~~~~~  350 (389)
T PRK05968        276 LKAHPVV--ERVCHPALANHPPAGLSGTSGLFSFIFRE---GIDVRAFADALKLFRLGVSWGGHESLVVPAEVVLQQKAQ  350 (389)
T ss_pred             HHhCCCc--cEEECCCCCCChHHhCCCCceEEEEEECC---HHHHHHHHHhCCccEEecCCCCCCceeeeCcccccccCC
Confidence            6654211  01110          11456788888863   3466788888876543322         10         


Q ss_pred             ---------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 ---------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 ---------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                               .++.+|+++++..    .+.+++-|+++++
T Consensus       351 ~~~~~~~gi~~~liR~SvGlE~----~~dl~~dl~~al~  385 (389)
T PRK05968        351 PNSAARFGVSPRSVRLHVGLEG----TEALWADLEQALA  385 (389)
T ss_pred             HHHHHhcCCCCCeEEEEeccCC----HHHHHHHHHHHHH
Confidence                     1478999976554    4455555555554

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.57  E-value=9.3e-14  Score=126.18  Aligned_cols=220  Identities=17%  Similarity=0.208  Sum_probs=132.7

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE  119 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~  119 (306)
                      ..++..|++++++.++   +++++|+++.++|++|...+    +++|.++|+++|+++|+|++|+.. ......  . .+
T Consensus       129 ~~~d~~d~e~l~~~i~---~~tklV~ie~p~NPtg~~~d----l~~I~~la~~~gi~lIvD~a~a~~-~~~~p~--~-~g  197 (388)
T PRK07811        129 TPVDLSDLDAVRAAIT---PRTKLIWVETPTNPLLSITD----IAALAELAHDAGAKVVVDNTFASP-YLQQPL--A-LG  197 (388)
T ss_pred             EEeCCCCHHHHHHhcC---cCCeEEEEECCCCCcceecC----HHHHHHHHHHcCCEEEEECCCCcc-ccCCch--h-hC
Confidence            4455568999999987   47899999999999998888    999999999999999999999732 111111  1 22


Q ss_pred             CCCcEEEecccccC-CcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Q 021893          120 VRPDMVILGKALGG-GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHL  197 (306)
Q Consensus       120 ~~~d~~s~sK~~~~-G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L  197 (306)
                      .+..+.|++|.++| |-.+.|+++++ +++.+.+...........++.....+...++.+..  ..++.+++...+.+.|
T Consensus       198 aDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~tl~~--R~~~~~~na~~la~~L  275 (388)
T PRK07811        198 ADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLKTLAV--RMDRHSENAEAVAEFL  275 (388)
T ss_pred             CcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHHHH
Confidence            33334477899985 32167888775 66656554322222233345544444444443322  3455566777777777


Q ss_pred             HHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHH--CCceec--------cC------
Q 021893          198 FKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILAK--------PT------  248 (306)
Q Consensus       198 ~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~--~Gi~~~--------~~------  248 (306)
                      ++...    .+|+..         ....+.|.++.|++...  ......|.+.|.=  .+.-.+        |.      
T Consensus       276 ~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~--~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~  353 (388)
T PRK07811        276 AGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGG--EEAARDFCARTKVFTLAESLGGVESLIEHPSAMTHAS  353 (388)
T ss_pred             HhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCC--HHHHHHHHHhCCcceeeccCCCCcceEeCCcccCccc
Confidence            65421    111110         12245688999998631  2334455555432  121111        10      


Q ss_pred             --------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 --------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 --------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                              .++.||+++.+    ||.+.+++.|++++.
T Consensus       354 ~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~  387 (388)
T PRK07811        354 TAGSQLEVPDDLVRLSVGI----EDVADLLADLEQALG  387 (388)
T ss_pred             CCHhhcCCCCCEEEEEeCC----CCHHHHHHHHHHHhh
Confidence                    24689999543    566777777777765

>PRK14012 cysteine desulfurase; Provisional

Probab=99.57  E-value=3.5e-13  Score=123.43  Aligned_cols=213  Identities=15%  Similarity=0.236  Sum_probs=132.3

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |++.|+++|+   +++++++++++++++|.+.+    +++|.++|+++|+++|+|++|+ +   |.. .++.....+|++
T Consensus       133 d~~~l~~~i~---~~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~vivD~a~~-~---g~~-~~~~~~~~~D~~  200 (404)
T PRK14012        133 DLEKLEAAMR---DDTILVSIMHVNNEIGVIQD----IAAIGEICRERGIIFHVDAAQS-V---GKV-PIDLSKLKVDLM  200 (404)
T ss_pred             CHHHHHHhcC---CCCEEEEEECcCCCccchhh----HHHHHHHHHHcCCEEEEEcchh-c---CCc-ccCcccCCCCEE
Confidence            7999999997   46889999999999999988    9999999999999999999997 2   211 112223457777


Q ss_pred             Eec--ccccCCcccceeeEeCHHHHhhcCCCCccC-------CCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 021893          126 ILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGS-------TFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELR  194 (306)
Q Consensus       126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~  194 (306)
                      ++|  |.++ .. ++|+++++++....+.+...+.       ..+.+.....+..++++....  ++..++.+++.+++.
T Consensus       201 ~~s~~K~~g-p~-g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~  278 (404)
T PRK14012        201 SFSAHKIYG-PK-GIGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLW  278 (404)
T ss_pred             EEehhhccC-CC-ceEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence            666  9665 33 6788888766443343321111       112234444444455554432  224556666666666


Q ss_pred             HHHHHHHhhCCCceee--EE-Eee--eEEEEEEecCCChhhHHHHHHHHHHCCceec----cC-----------------
Q 021893          195 QHLFKIQQQFPNYVKE--VR-GRG--LFNAVEFDKTALPVSAYDICLKMKERGILAK----PT-----------------  248 (306)
Q Consensus       195 ~~L~~~~~~~~~~~~~--~~-~~g--~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~-----------------  248 (306)
                      +.|+++    ++....  .. ...  ..+++.+.      +..++...|.+.+|..+    +.                 
T Consensus       279 ~~L~~~----~~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~  348 (404)
T PRK14012        279 NGIKDI----EEVYLNGDLEQRVPGNLNVSFNYV------EGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDEL  348 (404)
T ss_pred             HHHhcC----CCEEEeCCccccCCCEEEEEEeCc------CHHHHHHhCCCeEEEchhhhCCCCCCCCHHHHHcCCChhh
Confidence            666543    212111  01 111  12333322      12356665543332211    21                 


Q ss_pred             CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          249 HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       249 ~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      ..+.||++++..+|++|++++++.|+++++ .+..
T Consensus       349 ~~~~iRls~~~~~t~~dvd~~~~~l~~~~~-~~~~  382 (404)
T PRK14012        349 AHSSIRFSLGRFTTEEEIDYAIELVRKSIG-KLRE  382 (404)
T ss_pred             cCceEEEEecCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence            137899999999999999999999999988 7643

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=99.57  E-value=3.5e-13  Score=113.17  Aligned_cols=220  Identities=16%  Similarity=0.133  Sum_probs=158.9

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      .++.+++.+.+|  +++++++.+..++||...+   .++...++|++|+.+|++|.+.+   -.|..|.++.|+++.-..
T Consensus       130 ~le~i~~~lsqh--~p~~vfv~hgdsSTgV~q~---~~~~~g~lc~k~~~lllVD~VaS---lggt~F~mDewgVDvayt  201 (385)
T KOG2862|consen  130 PLEEITEKLSQH--KPKAVFVTHGDSSTGVLQD---LLAISGELCHKHEALLLVDTVAS---LGGTEFEMDEWGVDVAYT  201 (385)
T ss_pred             cHHHHHHHHHhc--CCceEEEEecCccccccch---HHHHHHHHhhcCCeEEEEechhh---cCCccceehhhcccEEEe
Confidence            589999999986  7899999999999997654   46777889999999999999987   345778788887655455


Q ss_pred             EecccccCCcccceeeEeCHHHHhhcCCCCc-----------------------cCCCCCCHHHHHHHHHHHHHHhhc--
Q 021893          126 ILGKALGGGVIPVSAVLADKEVMLCIQPGEH-----------------------GSTFGGNPLASAVAIASLDVIRDE--  180 (306)
Q Consensus       126 s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~aa~~al~~~~~~--  180 (306)
                      ...|++++.- +++.+..++..+++++....                       ...++.+...+-+..+||..+.++  
T Consensus       202 gSQKaL~aP~-GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL  280 (385)
T KOG2862|consen  202 GSQKALGAPA-GLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGL  280 (385)
T ss_pred             cchhhcCCCC-CcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHH
Confidence            6669999554 55668888888887764311                       011133444555666888877664  


Q ss_pred             -cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-Cceec----cCCCCEEE
Q 021893          181 -KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAK----PTHDTIVR  254 (306)
Q Consensus       181 -~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~----~~~~~~lR  254 (306)
                       +..++.++..++++..|++++.+. ....+....-....+..+.   ..+..+++.++..+ ++.+.    +..+..+|
T Consensus       281 ~~~~~rH~e~s~~l~~~l~~~GLq~-fv~~e~~rlptvttv~vp~---gvDw~dVv~~~~~~~~vei~gglg~~~gKv~R  356 (385)
T KOG2862|consen  281 ENSWRRHREMSKWLKLSLEALGLQL-FVVDEELRLPTVTTVKVPY---GVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFR  356 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCccc-eecChhhccCcceeeecCC---CCCHHHHHHHHHHhcCEEeccccCCCcccEEE
Confidence             457788899999999999986443 1222222333334555554   67788999999999 45444    33578999


Q ss_pred             EeCC-CCCCHHHHHHHHHHHHHHHh
Q 021893          255 LTPP-LSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       255 i~~~-~~~t~~~i~~~~~~l~~~l~  278 (306)
                      |.+. ...+.+.|+..++.|+.++.
T Consensus       357 IGl~gcna~~e~i~~v~~ll~~alq  381 (385)
T KOG2862|consen  357 IGLLGCNANVEYIDNVVELLKLALQ  381 (385)
T ss_pred             EEEeeccCCcHHHHHHHHHHHHHHh
Confidence            9974 44578889999999998887

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.57  E-value=9.4e-14  Score=125.90  Aligned_cols=205  Identities=15%  Similarity=0.075  Sum_probs=139.1

Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEe--cccccCCcccc
Q 021893           61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVIL--GKALGGGVIPV  138 (306)
Q Consensus        61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~--sK~~~~G~~~~  138 (306)
                      +++|.+.++.+.+|.+.+    +++|.+  +++|+++++|.+|+ +|  ...+..+  .  .|++.+  .|++++.. ++
T Consensus       137 ~~~V~~~h~~t~tG~~~p----i~~I~~--~~~g~~~vVDa~qs-~G--~~pidv~--~--iD~~~~s~~K~l~~P~-G~  202 (378)
T PRK03080        137 DRDVVFTWNGTTTGVRVP----VARWIG--ADREGLTICDATSA-AF--ALPLDWS--K--LDVYTFSWQKVLGGEG-GH  202 (378)
T ss_pred             CCCEEEEecCCccceecc----chhhcc--ccCCCeEEEecccc-cc--cCCCCHH--H--CcEEEEehhhhCCCCC-ce
Confidence            456899999999999999    999998  88999999999998 21  1222222  2  366644  49998877 88


Q ss_pred             eeeEeCHHHHhhcCCCCc----------------------cCC-CCCCHHHHHHHHHHHHHHhhc-c---HHHHHHHHHH
Q 021893          139 SAVLADKEVMLCIQPGEH----------------------GST-FGGNPLASAVAIASLDVIRDE-K---LAERSAHLGE  191 (306)
Q Consensus       139 g~~~~~~~~~~~~~~~~~----------------------~~~-~~~~~~~~~aa~~al~~~~~~-~---~~~~~~~~~~  191 (306)
                      |+++.+++.++.+.+...                      ..+ ++.+..++.++.++++.+.+. +   +.++.+++.+
T Consensus       203 g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~  282 (378)
T PRK03080        203 GMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANAS  282 (378)
T ss_pred             EEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            999999998877664210                      111 123344555667888888764 3   4567777788


Q ss_pred             HHHHHHHHHHhhCCCceeeEEE-eeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHHH
Q 021893          192 ELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNEL  266 (306)
Q Consensus       192 ~l~~~L~~~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~i  266 (306)
                      ++++.|+++..... ....... .+.++.+.+++.. .....++...|.++|+.++.++    .+.+|++++.+++.+||
T Consensus       283 ~l~~~l~~~~~~~~-~~~~~~~~s~~i~~~~~~~~~-~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di  360 (378)
T PRK03080        283 VLYDWAEKTPWATP-LVADPATRSNTSVTLDFVDAQ-AAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADV  360 (378)
T ss_pred             HHHHHHHhCCCccc-ccCCccccCccEEEEEcCCch-HHHHHHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHH
Confidence            88888876642100 1001111 2345666555200 0123456777878888876532    47899999999999999


Q ss_pred             HHHHHHHHHHHhhhcC
Q 021893          267 QEGSKALHDVLELDLP  282 (306)
Q Consensus       267 ~~~~~~l~~~l~~~~~  282 (306)
                      +.+++.|+++++ +++
T Consensus       361 ~~l~~al~~~~~-~~~  375 (378)
T PRK03080        361 EALTPWLDWAFE-RLK  375 (378)
T ss_pred             HHHHHHHHHHHH-HHh
Confidence            999999999988 654

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.57  E-value=1.8e-13  Score=124.85  Aligned_cols=145  Identities=19%  Similarity=0.214  Sum_probs=103.7

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE  119 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~  119 (306)
                      ..++.+|++.++++++   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+|++|+.. ..+..+     +
T Consensus       133 ~~vd~~d~~~l~~~i~---~~tklV~le~p~NPtG~~~d----i~~I~~la~~~gi~lIvD~a~a~~-~~~~~l-----~  199 (403)
T PRK07503        133 RHVDLTDPAALKAAIS---DKTRMVYFETPANPNMRLVD----IAAVAEIAHGAGAKVVVDNTYCTP-YLQRPL-----E  199 (403)
T ss_pred             EEeCCCCHHHHHHhcC---ccCcEEEEeCCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCccc-ccCCch-----h
Confidence            4556678999999987   47899999999999999888    999999999999999999999732 112211     2


Q ss_pred             CCCcE--EEecccccC-C-cccceeeEeCHHHHhhcCCC--CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893          120 VRPDM--VILGKALGG-G-VIPVSAVLADKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL  193 (306)
Q Consensus       120 ~~~d~--~s~sK~~~~-G-~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l  193 (306)
                      ...|+  .|++|.++| | . +.|+++.+++++++++..  ........+++.+..++..++.+..  ..++..++...+
T Consensus       200 ~g~Di~v~S~tK~l~g~gd~-~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~tl~~--r~~~~~~na~~~  276 (403)
T PRK07503        200 LGADLVVHSATKYLGGHGDI-TAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKTLAL--RMDRHCASAQAV  276 (403)
T ss_pred             hCCCEEEccccccccCCCce-eEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcchHHH--HHHHHHHHHHHH
Confidence            33454  478899995 4 5 788888888888877632  2223455677777766666665533  234445666777


Q ss_pred             HHHHHHH
Q 021893          194 RQHLFKI  200 (306)
Q Consensus       194 ~~~L~~~  200 (306)
                      .+.|+..
T Consensus       277 a~~L~~~  283 (403)
T PRK07503        277 AEWLARH  283 (403)
T ss_pred             HHHHHhC
Confidence            7777653

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.56  E-value=6.9e-14  Score=127.09  Aligned_cols=219  Identities=15%  Similarity=0.135  Sum_probs=138.2

Q ss_pred             cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893           39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE  118 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~  118 (306)
                      +.+++.+|++++++.++   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+|++|... ..+..     .
T Consensus       126 ~~~vd~~d~e~l~~~i~---~~tklV~le~p~Np~G~v~d----l~~I~~la~~~gi~livD~a~a~~-~~~~~-----~  192 (391)
T TIGR01328       126 VDFINMAIPEEVKAHIK---DNTKIVYFETPANPTMKLID----MERVCRDAHSQGVKVIVDNTFATP-MLTNP-----V  192 (391)
T ss_pred             EEEECCCCHHHHHHhhc---cCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCchh-ccCCc-----h
Confidence            34566678999999887   57899999999999998888    999999999999999999999721 11211     1


Q ss_pred             CCCCcE--EEecccccC-CcccceeeEeCHHHHhhcCCCC--ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893          119 EVRPDM--VILGKALGG-GVIPVSAVLADKEVMLCIQPGE--HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL  193 (306)
Q Consensus       119 ~~~~d~--~s~sK~~~~-G~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l  193 (306)
                      +...|+  .|++|.+++ |....|++++++++++.++...  ...+...++..+..+...++.+..  ..++.+++...+
T Consensus       193 ~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~tl~~--r~~~~~~na~~l  270 (391)
T TIGR01328       193 ALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLKTLNI--RMKRHSENAMKV  270 (391)
T ss_pred             hcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCcHHH--HHHHHHHHHHHH
Confidence            233454  478899984 5413577888898887766321  111233455555555555544432  355666777777


Q ss_pred             HHHHHHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHH--CCceec--------cC--
Q 021893          194 RQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILAK--------PT--  248 (306)
Q Consensus       194 ~~~L~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~--~Gi~~~--------~~--  248 (306)
                      .+.|+....    .+|+..         ...++.|.++.|++...  ......|.+.|.=  .+.-.+        |.  
T Consensus       271 a~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~--~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~  348 (391)
T TIGR01328       271 AEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGG--FAGAKKLLNNLKLIRLAVSLGDAETLIQHPASM  348 (391)
T ss_pred             HHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCC--HHHHHHHHHhCCcceEecCCCCCcccCcCCCcc
Confidence            777776421    111110         12335688889988631  2334455555531  111111        10  


Q ss_pred             ---------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 ---------------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 ---------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                     .++.||++..    -||.+.+++.|+++++
T Consensus       349 ~~~~~~~~~~~~~gi~~~liR~svG----lE~~~dl~~dl~~al~  389 (391)
T TIGR01328       349 THAVVPKEEREAAGITDGMIRLSVG----LEDADDLIADLKQALD  389 (391)
T ss_pred             ccccCCHHHHHhcCCCCCeEEEEeC----cCCHHHHHHHHHHHHh
Confidence                           2468999943    3667888888888876

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.56  E-value=1.2e-13  Score=125.55  Aligned_cols=220  Identities=16%  Similarity=0.107  Sum_probs=130.9

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE  119 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~  119 (306)
                      .+++..+.+++++.++   +++++|+++.++|+++...+    +++|.++|+++|+++|+|++|..    |..  +....
T Consensus       133 ~~vd~~~~~~l~~~i~---~~tklV~le~p~Np~~~~~d----i~~I~~ia~~~gi~livD~a~a~----~~~--~~~l~  199 (394)
T PRK07050        133 RFYDPLIGAGIADLIQ---PNTRLIWLEAPGSVTMEVPD----VPAITAAARARGVVTAIDNTYSA----GLA--FKPFE  199 (394)
T ss_pred             EEECCCCHHHHHHhcC---CCCeEEEEECCCCCCccHhh----HHHHHHHHHHcCCEEEEECCccc----ccc--cCHHH
Confidence            3344445678888887   57899999999998887666    99999999999999999999972    111  11112


Q ss_pred             CCCc--EEEecccccCCc-ccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893          120 VRPD--MVILGKALGGGV-IPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ  195 (306)
Q Consensus       120 ~~~d--~~s~sK~~~~G~-~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~  195 (306)
                      ...|  +.|++|.++|+. .+.|+++. +++++++++......+...++.....++..++.+..  -.++..++...+.+
T Consensus       200 ~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~tl~~--Rl~~~~~~a~~la~  277 (394)
T PRK07050        200 HGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLPSLQV--RLAAHDRSALEVAE  277 (394)
T ss_pred             cCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCcHHH--HHHHHHHHHHHHHH
Confidence            2345  448899998532 15776665 677777765433322334444444444333333322  13444455556666


Q ss_pred             HHHHHHh----hCCCc---------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC--------------
Q 021893          196 HLFKIQQ----QFPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT--------------  248 (306)
Q Consensus       196 ~L~~~~~----~~~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------------  248 (306)
                      .|++...    .+|..         .....+.|.++.+.+..........+|.+.|...++.++-+              
T Consensus       278 ~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~  357 (394)
T PRK07050        278 WLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELFAIGWSWGGACSLAMPYDVASM  357 (394)
T ss_pred             HHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCCeeccccCCccceEeeCccccc
Confidence            6665321    01100         00123467778888763211245667777777665443321              


Q ss_pred             -------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 -------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 -------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                             .++.||++..+    ||.+.+++-|.+++.
T Consensus       358 ~~~~~~~~~~~iR~svGl----E~~~dl~~dl~~al~  390 (394)
T PRK07050        358 RTAKWPHRGTLVRLYIGL----EDEADLIADLEQALE  390 (394)
T ss_pred             chhhcCCCCCEEEEEeCc----CCHHHHHHHHHHHHH
Confidence                   13679999543    556666666666665

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.56  E-value=1e-13  Score=125.28  Aligned_cols=217  Identities=11%  Similarity=0.082  Sum_probs=135.7

Q ss_pred             cccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC
Q 021893           41 KVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV  120 (306)
Q Consensus        41 ~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~  120 (306)
                      +++..+.+.++++++   +++++|++|.++|++|.+.+    +++|+++|+++|+++++|++|+.    +.  .+....+
T Consensus       130 ~v~~~~~e~l~~~l~---~~TklV~lespsNPtg~v~d----l~~I~~la~~~g~~lvvD~t~a~----p~--~~~Pl~~  196 (394)
T PRK09028        130 YYDPMIGEGIRELIR---PNTKVLFLESPGSITMEVQD----VPTLSRIAHEHDIVVMLDNTWAS----PI--NSRPFEM  196 (394)
T ss_pred             EECCCCHHHHHHhcC---cCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCccc----cc--cCCcccc
Confidence            444556788988886   57999999999999998877    99999999999999999999972    11  1233344


Q ss_pred             CCcEE--EecccccC--CcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 021893          121 RPDMV--ILGKALGG--GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQH  196 (306)
Q Consensus       121 ~~d~~--s~sK~~~~--G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~  196 (306)
                      .+|++  |.+|+++|  .. -.|+++.++++++.++........+.++..+..+...++.+...  .++..++...+.+.
T Consensus       197 GaDivv~S~tK~l~Gh~d~-~~G~~~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL~lR--~~~~~~na~~la~~  273 (394)
T PRK09028        197 GVDISIQAATKYIVGHSDV-MLGTATANEKHWDQLREHSYLMGQCTSPDDVYLAMRGLRTLGVR--LAQHEKNALKVANW  273 (394)
T ss_pred             CceEEEEeCCeEecCCCCE-EEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHHH--HHHHHHHHHHHHHH
Confidence            56655  77799984  44 67777777777665553222233345667666666666655432  45556666667777


Q ss_pred             HHHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----------cC-----
Q 021893          197 LFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----------PT-----  248 (306)
Q Consensus       197 L~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----------~~-----  248 (306)
                      |++...    .+|+..         ....+.|.++.|.+.... ......|.+.|.=-.+.++          |.     
T Consensus       274 L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~-~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~~~  352 (394)
T PRK09028        274 LATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGD-PKAVTALVEGMQHFKMGFSWGGFESLILGVFGINKL  352 (394)
T ss_pred             HhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC-HHHHHHHHHhCCcceEecccCCCcceeECCCCcCcc
Confidence            765421    111110         123456888999886311 2334456555531111111          10     


Q ss_pred             --------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 --------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 --------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                              .++.||++..+    ||.+.+++.|.++++
T Consensus       353 ~~~~~~~~~~~liR~svGl----Ed~~dLi~Dl~~Al~  386 (394)
T PRK09028        353 RTATNWDFSKPLIRLHIGL----EDVDDLIADLEAGFE  386 (394)
T ss_pred             CchhhhcCCCCeEEEEeCc----CCHHHHHHHHHHHHH
Confidence                    23689999544    455566666666665

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.55  E-value=5.1e-14  Score=127.34  Aligned_cols=219  Identities=15%  Similarity=0.125  Sum_probs=136.6

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc-ccccccccccccC
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG-LARSGRMLASDWE  118 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g-~~~~g~~~~~~~~  118 (306)
                      ..++..|+++++++++   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+|++|.. +.       ....
T Consensus       121 ~~vd~~d~e~l~~~i~---~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~vIvDea~~~~~~-------~~pl  186 (388)
T PRK08861        121 QFVDQSDAAALDAALA---KKPKLILLETPSNPLVRVVD----IAELCQKAKAVGALVAVDNTFLTPVL-------QKPL  186 (388)
T ss_pred             EEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCcccccc-------CCCc
Confidence            3344568899998887   57899999999999999998    99999999999999999999972 21       1112


Q ss_pred             CCCCcEE--EecccccC--CcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893          119 EVRPDMV--ILGKALGG--GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL  193 (306)
Q Consensus       119 ~~~~d~~--s~sK~~~~--G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l  193 (306)
                      .+..|++  |.+|.++|  +. ..|+++++ +++.+.++..........++.....++..++.+...  .++..++...+
T Consensus       187 ~~GaDivv~S~tK~l~G~~d~-~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~Tl~lR--~~~~~~~a~~~  263 (388)
T PRK08861        187 ELGADFVIHSTTKYINGHSDV-IGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGIRTLGAR--MRVHEESAQQI  263 (388)
T ss_pred             ccCCCEEEeecceeccCCCcc-eeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcCCCHHHH--HHHHHHHHHHH
Confidence            2345554  77799985  34 57777774 566665553333333445666666666666555432  44555666666


Q ss_pred             HHHHHHHH----hhCCCc---------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH--CCceec--------cC--
Q 021893          194 RQHLFKIQ----QQFPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILAK--------PT--  248 (306)
Q Consensus       194 ~~~L~~~~----~~~~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~--~Gi~~~--------~~--  248 (306)
                      .+.|+...    ..+|+.         .....+.|.++.|++...  ......|++.|.=  .+.-.+        |.  
T Consensus       264 a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~--~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~  341 (388)
T PRK08861        264 LAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGS--FEQLKVFVKALALFSLAESLGGVESLICHPASM  341 (388)
T ss_pred             HHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCC--HHHHHHHHhcCCcceEccCCCCCcceeeCCCcc
Confidence            66666532    111110         012346788889988631  2234455544432  121111        10  


Q ss_pred             ---------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          249 ---------------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       249 ---------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                                     .++.||+++.+    |+.+.+++.|+++++ .+.
T Consensus       342 ~h~~~~~~~~~~~gi~~~liRlsvGl----E~~~dli~Dl~~al~-~~~  385 (388)
T PRK08861        342 THRAMGEEALAEAGVSQQLLRLSVGL----EDAQDLIADLDQAFA-KAA  385 (388)
T ss_pred             cccccCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHHHH-HHH
Confidence                           24789999543    566777777777776 543

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.55  E-value=3.8e-13  Score=120.84  Aligned_cols=208  Identities=16%  Similarity=0.189  Sum_probs=129.8

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCc
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d  123 (306)
                      .|++.+++.++   +++++|++++   ++|...+    +++|.++|+++|+++|+|++|+ |....+.     ..+...|
T Consensus        94 ~d~~~l~~~i~---~~~~~v~~~~---~~G~~~~----~~~i~~l~~~~~i~li~D~a~~~g~~~~~~-----~~~~~~d  158 (352)
T cd00616          94 IDPELIEAAIT---PRTKAIIPVH---LYGNPAD----MDAIMAIAKRHGLPVIEDAAQALGATYKGR-----KVGTFGD  158 (352)
T ss_pred             cCHHHHHHhcC---cCCeEEEEEC---CCCCcCC----HHHHHHHHHHcCCeEEEECCCCCCCeECCE-----EcccCcc
Confidence            37899998886   5688888764   4677777    9999999999999999999997 3211111     1121234


Q ss_pred             EE--Eec--ccccCCcccceeeEeC-HHHHhhcCCCCcc---------------CCCCCCHHHHHHHHHHHHHHhhccHH
Q 021893          124 MV--ILG--KALGGGVIPVSAVLAD-KEVMLCIQPGEHG---------------STFGGNPLASAVAIASLDVIRDEKLA  183 (306)
Q Consensus       124 ~~--s~s--K~~~~G~~~~g~~~~~-~~~~~~~~~~~~~---------------~~~~~~~~~~~aa~~al~~~~~~~~~  183 (306)
                      +.  |++  |.+++|  ..|+++.+ +++++.++.....               ..+..+.+..+.+...++.+  +++.
T Consensus       159 ~~~~S~~~~K~~~~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~--~~~~  234 (352)
T cd00616         159 AGAFSFHPTKNLTTG--EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKL--DEII  234 (352)
T ss_pred             eeEEcCCCCCCCccc--CceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhh--HHHH
Confidence            44  444  999544  45666664 5766654421100               11123344444444444433  3456


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeE---EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----------
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKEV---RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----------  249 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~---~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----------  249 (306)
                      ++.+++.+++++.|+.+...  ......   .....++.+.+.+. ...+..++.+.|.++||.++...           
T Consensus       235 ~~~~~~~~~~~~~L~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~  311 (352)
T cd00616         235 ARRREIAERYKELLADLPGI--RLPDVPPGVKHSYHLYVIRLDPE-AGESRDELIEALKEAGIETRVHYPPLHHQPPYKK  311 (352)
T ss_pred             HHHHHHHHHHHHHhcCCCCc--cCCCCCCCCceeeEEEEEEECCc-CCCCHHHHHHHHHHCCCCeeeecCccccCHhhhh
Confidence            77778888888888764211  011111   12344556655421 12467789999999999766210           


Q ss_pred             ----------------CCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893          250 ----------------DTIVRLTPPLSISSNELQEGSKALH  274 (306)
Q Consensus       250 ----------------~~~lRi~~~~~~t~~~i~~~~~~l~  274 (306)
                                      .+.+|++++..+|++|++.+++.|+
T Consensus       312 ~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~  352 (352)
T cd00616         312 LLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR  352 (352)
T ss_pred             ccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence                            1689999999999999999998874

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.54  E-value=1.1e-13  Score=125.26  Aligned_cols=219  Identities=12%  Similarity=0.105  Sum_probs=137.6

Q ss_pred             cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893           39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE  118 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~  118 (306)
                      +.+++..|++.++++++   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+|+++... .....  . .+
T Consensus       113 v~~vd~~d~~~le~~i~---~~tklv~le~psnptg~v~d----l~~I~~la~~~g~~vivD~a~~~~-~~~~~--l-~~  181 (378)
T TIGR01329       113 VVHVDTTDLDKVKAALG---PKTKLVLLESPTNPLQKIVD----IRKISEMAHAQNALVVVDNTMMSP-LLCNP--L-EL  181 (378)
T ss_pred             EEEeCCCCHHHHHHhcC---cCceEEEEECCCCCCCeeec----HHHHHHHHHHcCCEEEEECCCccc-ccCCh--h-hc
Confidence            35566678999999987   57999999999999999988    999999999999999999998521 11111  1 12


Q ss_pred             CCCCcEEEecccccC--CcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893          119 EVRPDMVILGKALGG--GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ  195 (306)
Q Consensus       119 ~~~~d~~s~sK~~~~--G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~  195 (306)
                      +.+..+.|.+|.++|  +. ..|+++++ +.+.++++..........++..+..+...++.+..  ..++..++...+.+
T Consensus       182 g~Di~v~S~tK~l~G~~~~-~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~tl~~--R~e~~~~na~~la~  258 (378)
T TIGR01329       182 GADIVYHSATKFLAGHSDV-MAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIKTLAI--RIEKQQENARAIAM  258 (378)
T ss_pred             CCcEEEEecceeccCCccc-eeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCCCHHH--HHHHHHHHHHHHHH
Confidence            333334477899985  34 68888774 55556565433322333445544443444433322  24455555666666


Q ss_pred             HHHHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC--------------
Q 021893          196 HLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT--------------  248 (306)
Q Consensus       196 ~L~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------------  248 (306)
                      .|++...    .+|...         ....+.|.++.|.+..   ...+.+|+..|...++.++.+              
T Consensus       259 ~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~---~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~  335 (378)
T TIGR01329       259 FLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS---VALSKRLVEATKLFSITVSFGSVNSLISMPCFMSH  335 (378)
T ss_pred             HHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC---HHHHHHHHHhCcCcccccCCCCCCceeeCCCcccc
Confidence            6654221    011000         0123567888888832   233778888886555554421              


Q ss_pred             -------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 -------------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 -------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                   .++.+|++..    -||.+.+++-|+++++
T Consensus       336 ~~~~~~~~~~~gi~~~liR~svG----lE~~~dl~~dl~~al~  374 (378)
T TIGR01329       336 ASIPAEVREERGLPEDLVRLSVG----IEDVDDLISDLDIAFV  374 (378)
T ss_pred             ccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHH
Confidence                         2478999943    3667778888888877

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.54  E-value=1.7e-13  Score=123.30  Aligned_cols=208  Identities=18%  Similarity=0.141  Sum_probs=132.8

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|+++++++++   +++++|+++.++|++|...+    +++|.++|+++|+++|+|+++...    .  .....+...|+
T Consensus       124 ~d~~~l~~~i~---~~TklV~lesP~NPtg~~~d----i~~I~~la~~~gi~vvvD~t~~~~----~--~~~pl~~gaDi  190 (364)
T PRK07269        124 NTEEELIAAIE---EDTDIVYIETPTNPLMVEFD----IEKVAKLAHAKGAKVIVDNTFYSP----I--YQRPIELGADI  190 (364)
T ss_pred             CCHHHHHHhcC---cCceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCccc----c--cCCchhhCCcE
Confidence            47899999997   57999999999999998888    999999999999999999997521    1  11223445666


Q ss_pred             E--EecccccC-CcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Q 021893          125 V--ILGKALGG-GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKI  200 (306)
Q Consensus       125 ~--s~sK~~~~-G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~  200 (306)
                      +  |++|.++| |-.-.|+++. ++++.+.++..........+++.+..+...|+.+..  ..++.+++...+.+.|+..
T Consensus       191 vv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~tL~~--r~~~~~~na~~~a~~L~~~  268 (364)
T PRK07269        191 VLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLKTLSL--RMERSTANAQEVVAFLKKS  268 (364)
T ss_pred             EEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCcHHH--HHHHHHHHHHHHHHHHHhC
Confidence            5  66699984 3113556776 466766665322222345577777777766665433  3455566666666666653


Q ss_pred             HhhCCCce-eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC----------CceeccC-----------------CCCE
Q 021893          201 QQQFPNYV-KEVRGRGLFNAVEFDKTALPVSAYDICLKMKER----------GILAKPT-----------------HDTI  252 (306)
Q Consensus       201 ~~~~~~~~-~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~----------Gi~~~~~-----------------~~~~  252 (306)
                          |.+. ...++.|.++.|.+..   ......|.+.+.--          ++++.|.                 .++.
T Consensus       269 ----p~v~~v~ypg~gg~~sf~~~~---~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~l  341 (364)
T PRK07269        269 ----PAVKEVLYTGKGGMISFKVAD---ETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDL  341 (364)
T ss_pred             ----CCccEEeCCCcCcEEEEEECC---HHHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCe
Confidence                2111 1225678888888752   22333444443221          2232231                 2578


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          253 VRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       253 lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +|++..    -|+.+.+++-|+++++
T Consensus       342 iRlsvG----lE~~~dli~dl~~al~  363 (364)
T PRK07269        342 LRLSIG----IEDARDLIADLKQALE  363 (364)
T ss_pred             EEEEec----cCCHHHHHHHHHHHhc
Confidence            999943    3567777888877765

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.54  E-value=7.2e-13  Score=119.82  Aligned_cols=211  Identities=17%  Similarity=0.199  Sum_probs=130.2

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc-ccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA-RSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~-~~g~~~~~~~~~~~~d~  124 (306)
                      |++++++.++   +++++|+..   +++|...+    +++|.++|++||+++|+|++|+-.. +.|.     ..+..-|+
T Consensus       108 d~~~le~~i~---~~tk~Iip~---~~~G~~~d----~~~I~~la~~~~i~vIeDaa~~~g~~~~~~-----~~g~~~~~  172 (376)
T TIGR02379       108 DETLIESAIT---HRTKAIVPV---HYAGVACD----MDTIMALANKHQLFVIEDAAQGVMSTYKGR-----ALGSIGHL  172 (376)
T ss_pred             CHHHHHHhcC---cCceEEEEe---CCCCCccC----HHHHHHHHHHCCCEEEEECccccCCccCCc-----ccCCCCCE
Confidence            7888999887   468887633   34677777    9999999999999999999998221 2222     12333377


Q ss_pred             EEec----ccccCCcccceeeEeC-HHHHhhcCCCCc---------------------cCCCCCCHHHHHHHHHHHHHHh
Q 021893          125 VILG----KALGGGVIPVSAVLAD-KEVMLCIQPGEH---------------------GSTFGGNPLASAVAIASLDVIR  178 (306)
Q Consensus       125 ~s~s----K~~~~G~~~~g~~~~~-~~~~~~~~~~~~---------------------~~~~~~~~~~~~aa~~al~~~~  178 (306)
                      .+||    |.+.+|. +.|+++.+ +++.+.++....                     +..+..+.+.++.+.+.++.+.
T Consensus       173 ~~fSf~~~K~l~~g~-~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~  251 (376)
T TIGR02379       173 GTFSFHETKNYTSGG-EGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQAD  251 (376)
T ss_pred             EEEeCCCCCcCcccC-CceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhH
Confidence            7888    9998776 78887765 777776653211                     1112234455555555565543


Q ss_pred             hccHHHHHHHHHHHHHHHHHHHHh----hCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----C-
Q 021893          179 DEKLAERSAHLGEELRQHLFKIQQ----QFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----H-  249 (306)
Q Consensus       179 ~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~-  249 (306)
                      .  ..++.+++.++..+.|..+..    ..+...........++++.+++   ..+..++.+.|.++||.+++.    . 
T Consensus       252 ~--~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~r~~l~~~L~~~gI~~~~~~~p~~~  326 (376)
T TIGR02379       252 R--INQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKD---EDDRNELIKYLKEQEIMAVFHYVPLHS  326 (376)
T ss_pred             H--HHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECC---cCCHHHHHHHHHHCCCCccccCcCCCc
Confidence            3  455555566666666655321    1111111111122334555543   235678999999999987731    0 


Q ss_pred             ---------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          250 ---------------------DTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       250 ---------------------~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                                           ...+.+=++...+++|+++.++.|++++
T Consensus       327 ~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~  375 (376)
T TIGR02379       327 SPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL  375 (376)
T ss_pred             chhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence                                 1234444445689999999999998765

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.54  E-value=1.5e-13  Score=124.86  Aligned_cols=217  Identities=13%  Similarity=0.091  Sum_probs=127.7

Q ss_pred             cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893           39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE  118 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~  118 (306)
                      +.+++..|++++++.++   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+|++|..+. ....  . .+
T Consensus       120 v~~v~~~d~~~l~~~l~---~~tklV~l~~p~NptG~~~d----l~~I~~la~~~g~~vvvD~a~~~~~-~~~~--~-~~  188 (390)
T PRK08064        120 HTFVDMTNLEEVAQNIK---PNTKLFYVETPSNPLLKVTD----IRGVVKLAKAIGCLTFVDNTFLTPL-LQKP--L-DL  188 (390)
T ss_pred             EEEECCCCHHHHHHhcC---CCceEEEEECCCCCCcEecc----HHHHHHHHHHcCCEEEEECCCCccc-ccCc--h-hh
Confidence            34556668999998887   57899999999999999988    9999999999999999999987321 1111  1 12


Q ss_pred             CCCCcEEEecccccC--CcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893          119 EVRPDMVILGKALGG--GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ  195 (306)
Q Consensus       119 ~~~~d~~s~sK~~~~--G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~  195 (306)
                      +.+..+.|++|.++|  |. -.|++++ ++++++.++..........++.....+...++.+..  ..++..++...+.+
T Consensus       189 g~Divv~S~tK~~~G~~~~-laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l~~~gl~tl~~--R~~~~~~~a~~la~  265 (390)
T PRK08064        189 GADVVLHSATKFLAGHSDV-LAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWLVLRGLKTLHV--RLEHSSETANKIAL  265 (390)
T ss_pred             CCcEEEeecceeccCCccc-eeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHH--HHHHHHHHHHHHHH
Confidence            333333477899974  33 4566666 467777776543333333344444444444433322  23444555555666


Q ss_pred             HHHHHHh----hCCCc---------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCce---ec----------c--
Q 021893          196 HLFKIQQ----QFPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL---AK----------P--  247 (306)
Q Consensus       196 ~L~~~~~----~~~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~---~~----------~--  247 (306)
                      .|++...    .+|..         .....+.|.++.|++..   ......|.+.   .++.   ++          |  
T Consensus       266 ~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~---~~~~~~f~~~---l~l~~~~~s~G~~~sl~~~~~~  339 (390)
T PRK08064        266 YLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQS---EEAVRQFVSH---VKLPVFAVSLGAVESILSYPAK  339 (390)
T ss_pred             HHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECC---HHHHHHHHHh---CCcceEcccCCCCcceeECCcc
Confidence            6665321    01100         01234677888888853   2223333333   3431   11          1  


Q ss_pred             ---------------CCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          248 ---------------THDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       248 ---------------~~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                                     ..++.+|+|+.+..+++.++.+.++|++
T Consensus       340 ~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~  382 (390)
T PRK08064        340 MSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSY  382 (390)
T ss_pred             cccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence                           0257899997776655555555555543

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.54  E-value=1.4e-12  Score=120.90  Aligned_cols=216  Identities=15%  Similarity=0.078  Sum_probs=140.2

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |+++||++++++  ++++|++.  .+.++...+    +++|.++|+++|++|++|++|. |+...+. ......  ..|+
T Consensus       171 D~d~Le~~l~~~--~pklIv~~--~S~~s~~~D----~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~-~~~p~~--~~Di  239 (475)
T PLN03226        171 DYDKLEKKAMLF--RPKLIIAG--ASAYPRDWD----YARMRKIADKVGALLMCDMAHISGLVAAQE-AASPFE--YCDV  239 (475)
T ss_pred             CHHHHHHHHhhc--CCeEEEEe--cCcCCCccC----HHHHHHHHHHcCCEEEEEchhhhCcccCCC-CCCCCC--CCeE
Confidence            999999999864  45555552  223455666    8999999999999999999998 5422221 111111  3555


Q ss_pred             E--EecccccCCcccceeeEeCHHHHh--------------hcCCCC-ccCCCCCCHHHHHHHHHHHHHHhhc---cHHH
Q 021893          125 V--ILGKALGGGVIPVSAVLADKEVML--------------CIQPGE-HGSTFGGNPLASAVAIASLDVIRDE---KLAE  184 (306)
Q Consensus       125 ~--s~sK~~~~G~~~~g~~~~~~~~~~--------------~~~~~~-~~~~~~~~~~~~~aa~~al~~~~~~---~~~~  184 (306)
                      +  |++|++.|.. + |++++++++.+              ...... .......++..+++..++++.+.+.   .+.+
T Consensus       240 v~~t~hK~L~GP~-G-g~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~  317 (475)
T PLN03226        240 VTTTTHKSLRGPR-G-GMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQK  317 (475)
T ss_pred             EEecCcccccCCC-c-eEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHH
Confidence            4  6779996543 3 66877775431              111110 1111223455666677889888653   3678


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC---------CCCEEEE
Q 021893          185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT---------HDTIVRL  255 (306)
Q Consensus       185 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---------~~~~lRi  255 (306)
                      ++.++.+++++.|++.+..    +........+..+++..  .+.+..++.+.|.+.||.+..+         .+..+|+
T Consensus       318 ~~~~na~~L~~~L~~~G~~----l~~~~t~~hi~lv~~~~--~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRi  391 (475)
T PLN03226        318 QVKANAAALANRLMSKGYK----LVTGGTDNHLVLWDLRP--LGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRI  391 (475)
T ss_pred             HHHHHHHHHHHHHHhCCCE----EEcCCCCCCEEEEEccC--CCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCccc
Confidence            8889999999988885322    11111124566666643  1356777888898999988643         3566888


Q ss_pred             e----CCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          256 T----PPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       256 ~----~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .    .+...+++|++++.+.|.++++ ..
T Consensus       392 Gt~~lt~~g~~~~d~~~ia~~i~~~~~-~~  420 (475)
T PLN03226        392 GTPAMTSRGLVEKDFEKVAEFLHRAVT-IA  420 (475)
T ss_pred             CcHHHHHCCCCHHHHHHHHHHHHHHHH-Hh
Confidence            3    3467888999999999999998 54

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.53  E-value=3.5e-13  Score=121.51  Aligned_cols=198  Identities=15%  Similarity=0.100  Sum_probs=121.0

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccC--Ccc
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGG--GVI  136 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~--G~~  136 (306)
                      +++++|+++.++|++|.+.+    +++|.++|+++|+++++|++|...  .+.. ..+ ++.+..+.|++|+++|  |. 
T Consensus       131 ~~t~lV~le~p~NPtg~v~d----i~~I~~~a~~~g~~lvVD~t~~~~--~~~~-p~~-~g~Divv~S~sK~l~G~~g~-  201 (366)
T PRK07582        131 AGADLVLAETPSNPGLDVCD----LAALAAAAHAAGALLVVDNTTATP--LGQR-PLE-LGADLVVASDTKALTGHSDL-  201 (366)
T ss_pred             cCceEEEEECCCCCCCCccC----HHHHHHHHHHcCCEEEEECCCCCc--cccC-chh-cCCcEEEecccccccCCCCe-
Confidence            47899999999999998887    999999999999999999998521  1211 112 2323334478899974  67 


Q ss_pred             cceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----hCCCcee--
Q 021893          137 PVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVK--  209 (306)
Q Consensus       137 ~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~--  209 (306)
                      ++||++. ++++++.++..........+++.+..+...++.+..  ..++..++...+.+.|++...    .+|+...  
T Consensus       202 ~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~tl~~--R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p  279 (366)
T PRK07582        202 LLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGTLGL--RFARQCANALAVAELLAGHPAVRGVRYPGLPGDP  279 (366)
T ss_pred             eEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccccHHH--HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCc
Confidence            8999987 477777665433323334456666666555554422  246667788888888886531    1111110  


Q ss_pred             -------eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec-c------------------CCCCEEEEeCCCCCCH
Q 021893          210 -------EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK-P------------------THDTIVRLTPPLSISS  263 (306)
Q Consensus       210 -------~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~-~------------------~~~~~lRi~~~~~~t~  263 (306)
                             ...+.|.++.|.+.+   .   ++..+.+...++... +                  ..++.||+++++-..+
T Consensus       280 ~~~~~~~~~~~~gg~~s~~~~~---~---~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~  353 (366)
T PRK07582        280 AHEVAARQMRRFGGLVSFELAD---A---AAAERFVAASRLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGIEDTD  353 (366)
T ss_pred             cHHHHHhhCCCCcceEEEEeCC---H---HHHHHHHHhCCcceecccCCCccchhhhHHHcCCCCCCCeEEEEeccCCHH
Confidence                   112468888888852   2   233333333344332 0                  1246899997766554


Q ss_pred             HHHHHHHHHH
Q 021893          264 NELQEGSKAL  273 (306)
Q Consensus       264 ~~i~~~~~~l  273 (306)
                      +.|+.+.++|
T Consensus       354 dli~dl~~al  363 (366)
T PRK07582        354 DLVADLERAL  363 (366)
T ss_pred             HHHHHHHHHH
Confidence            4444444443

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.52  E-value=7.8e-13  Score=113.87  Aligned_cols=94  Identities=19%  Similarity=0.247  Sum_probs=77.8

Q ss_pred             CCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccc
Q 021893           37 PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD  116 (306)
Q Consensus        37 ~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~  116 (306)
                      ..+.++..+|++.++++|+   ++|++|++|..-|+.+.+.+    +++|.++|+++|++||+|++.+.      ++.+.
T Consensus       127 i~v~fvd~~d~~~~~~aI~---~nTkavf~EtigNP~~~v~D----ie~ia~iAh~~gvpliVDNT~at------pyl~r  193 (426)
T COG2873         127 IEVRFVDPDDPENFEAAID---ENTKAVFAETIGNPGLDVLD----IEAIAEIAHRHGVPLIVDNTFAT------PYLCR  193 (426)
T ss_pred             cEEEEeCCCCHHHHHHHhC---cccceEEEEeccCCCccccC----HHHHHHHHHHcCCcEEEecCCCc------ceecc
Confidence            3468888889999999999   68999999999999999999    99999999999999999999862      23355


Q ss_pred             cCCCCCcEE--EecccccC-CcccceeeEeC
Q 021893          117 WEEVRPDMV--ILGKALGG-GVIPVSAVLAD  144 (306)
Q Consensus       117 ~~~~~~d~~--s~sK~~~~-G~~~~g~~~~~  144 (306)
                      ..+...|++  |.+|.++| |- .+|.+++.
T Consensus       194 P~~hGADIVvHS~TK~igGhGt-~iGG~iVD  223 (426)
T COG2873         194 PIEHGADIVVHSATKYIGGHGT-AIGGVIVD  223 (426)
T ss_pred             hhhcCCCEEEEeecccccCCcc-ccceEEEe
Confidence            556667766  88899995 66 66655543

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.52  E-value=1.5e-13  Score=124.55  Aligned_cols=215  Identities=13%  Similarity=0.102  Sum_probs=131.6

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCc
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d  123 (306)
                      .|++++++++++  .++++|+++.++|++|.+.+    +++|.++|+++|+++|+|++|+ ++..  ...   .++.+..
T Consensus       124 ~d~~~l~~~i~~--~~tklV~ie~p~NPtG~v~d----l~~I~~la~~~gi~livD~t~a~~~~~--~~l---~~GaDiv  192 (385)
T PRK08574        124 PSTEDIIEAIKE--GRTKLVFIETMTNPTLKVID----VPEVAKAAKELGAILVVDNTFATPLLY--RPL---RHGADFV  192 (385)
T ss_pred             CCHHHHHHhcCc--cCceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCCccccC--Chh---hhCCcEE
Confidence            478899998873  27899999999999999888    9999999999999999999996 3211  111   2343344


Q ss_pred             EEEecccccC-CcccceeeE-eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Q 021893          124 MVILGKALGG-GVIPVSAVL-ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQ  201 (306)
Q Consensus       124 ~~s~sK~~~~-G~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~  201 (306)
                      +.|++|.++| |-.-.|+++ .++++.+.++......+...+++....++.+++.+..  ..++..++...+.+.|+...
T Consensus       193 v~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~tL~~--R~~~~~~na~~la~~L~~~p  270 (385)
T PRK08574        193 VHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLKTLEV--RFERQCRNAMAIAEFLSEHP  270 (385)
T ss_pred             EeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHH--HHHHHHHHHHHHHHHHHcCC
Confidence            5588899984 430245344 4677777665433323334456666666666655533  24455556667777776532


Q ss_pred             h----hCCCcee---------eE--EEeeeEEEEEEecCCChhhHHHHHHHHHH--CCceec--------cC--------
Q 021893          202 Q----QFPNYVK---------EV--RGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILAK--------PT--------  248 (306)
Q Consensus       202 ~----~~~~~~~---------~~--~~~g~~~~i~~~~~~~~~~~~~~~~~l~~--~Gi~~~--------~~--------  248 (306)
                      .    .+|+...         ..  .+.|.++.|++...  ......|++.|.=  .+.-.+        |.        
T Consensus       271 ~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~--~~~~~~~~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~  348 (385)
T PRK08574        271 KVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGG--RDAVLKFLRSLKLIKPSPSLGGVESLATYPVKSAASPIP  348 (385)
T ss_pred             CcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCC--HHHHHHHHHcCCcceEccCCCCCcceeeCCCcCCcccCC
Confidence            1    1111100         11  24688899988631  2334455555531  121111        10        


Q ss_pred             ---------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 ---------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 ---------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                               .++.+|++..    -|+.+.+++-|.++++
T Consensus       349 ~~~~~~~gi~~~liR~svG----lE~~~dli~dl~~al~  383 (385)
T PRK08574        349 EEDRKALGITEDLVRLSVG----LEDVEDLIEDLDQALG  383 (385)
T ss_pred             HHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHh
Confidence                     2468999954    3567777787777776

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.52  E-value=5e-13  Score=122.47  Aligned_cols=245  Identities=17%  Similarity=0.175  Sum_probs=142.7

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+||+....|+|........         .......+.+++.+|+++++++++   +++++|++++++|++|.+.+    
T Consensus        98 d~Vl~~~~~Y~~t~~~~~~~---------l~~~gi~v~~~d~~d~e~le~ai~---~~tklV~lesp~NPtG~v~d----  161 (425)
T PRK06084         98 DNIVSVAKLYGGTYNLLAHT---------LPRIGIETRFAAHDDIAALEALID---ERTKAVFCESIGNPAGNIID----  161 (425)
T ss_pred             CEEEEeCCCcchHHHHHHHh---------cccceeEEEEECCCCHHHHHHHhc---cCCcEEEEeCCCCCCCeecC----
Confidence            56777777776543221111         001111234566679999999997   46899999999999999888    


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--EecccccC-CcccceeeEe-CHHH-HhhcCC-C--
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLA-DKEV-MLCIQP-G--  154 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~g~~~~-~~~~-~~~~~~-~--  154 (306)
                      +++|.++|+++|+++|+|++|+.. ..     ........|++  |++|.++| |. ++|.+++ ++.+ ...... .  
T Consensus       162 l~~I~~la~~~~i~vVvD~a~a~~-~~-----~~p~~~gaDivv~S~tK~l~G~g~-~~gG~v~~~~~~~~~~~~~~~~~  234 (425)
T PRK06084        162 IQALADAAHRHGVPLIVDNTVATP-VL-----CRPFEHGADIVVHSLTKYIGGHGT-SIGGIVVDSGKFPWAEHKERFAL  234 (425)
T ss_pred             HHHHHHHHHHcCCEEEEECCCccc-cc-----CChhhcCCCEEEECchhccccccc-ceeEEEEeCCccchhhccccccc
Confidence            999999999999999999999721 11     12223345554  78899984 66 7776555 3321 111100 0  


Q ss_pred             ------------------------------CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh--
Q 021893          155 ------------------------------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ--  202 (306)
Q Consensus       155 ------------------------------~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~--  202 (306)
                                                    ........++..+..++..++.+..  ..++.+++...+.+.|+....  
T Consensus       235 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~--R~~~~~~na~~la~~L~~~p~v~  312 (425)
T PRK06084        235 LNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLAL--RMERHTENALKVARYLQQHPQVA  312 (425)
T ss_pred             cccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHH--HHHHHHHHHHHHHHHHHhCCCcc
Confidence                                          0011223344444444445544433  355666777777777776431  


Q ss_pred             --hCCCce---------eeEEE-eeeEEEEEEecCCChhhHHHHHHHHHHCC--ceec--------cC------------
Q 021893          203 --QFPNYV---------KEVRG-RGLFNAVEFDKTALPVSAYDICLKMKERG--ILAK--------PT------------  248 (306)
Q Consensus       203 --~~~~~~---------~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~l~~~G--i~~~--------~~------------  248 (306)
                        .+|+..         ....+ .|.++.|++...  ......|.+.|.=-.  .-.+        |.            
T Consensus       313 ~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~~--~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~  390 (425)
T PRK06084        313 WVKYAGLPDHPEHELARRYMGGKPASILSFGIKGG--QAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEEL  390 (425)
T ss_pred             EEECCCCCCcccHHHHHHhCCCCcceEEEEEecCC--HHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHH
Confidence              111110         11234 578889988631  223445655553111  1111        10            


Q ss_pred             -----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 -----HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 -----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                           .++.||++..    -||.+.+++-|+++|.
T Consensus       391 ~~~gi~~~liR~svG----lEd~~dLi~dl~~Al~  421 (425)
T PRK06084        391 EKAGVSRDMVRLSIG----IEHIDDIIADLAQALD  421 (425)
T ss_pred             HhcCCCCCeEEEEec----cCCHHHHHHHHHHHHH
Confidence                 2578999943    3667778888888776

>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]

Probab=99.51  E-value=5.4e-13  Score=109.53  Aligned_cols=215  Identities=14%  Similarity=0.147  Sum_probs=133.8

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-cccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~~~~~~d~  124 (306)
                      +.+++.+.++.. ..++.+++..+.|++|.+. ..+.+++|.+.-.  +.++++||+|-+|...++. .....   .|++
T Consensus       147 nvdai~evl~~d-s~iK~~F~tSPgNPtg~~i-k~~di~KiLe~p~--nglVVvDEAYidFsg~~S~~~lV~k---YpNL  219 (375)
T KOG0633|consen  147 NVDAIAEVLELD-SKIKCIFLTSPGNPTGSII-KEDDILKILEMPD--NGLVVVDEAYIDFSGVESRMKLVKK---YPNL  219 (375)
T ss_pred             cHHHHHHHHhcc-ccceEEEEcCCCCCCcccc-cHHHHHHHHhCCC--CcEEEEeeeeEeeccccccchHhHh---CCce
Confidence            578888888753 4789999999999999776 5667777776654  7999999999987433321 11222   2343


Q ss_pred             E---Eeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHH
Q 021893          125 V---ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHL  197 (306)
Q Consensus       125 ~---s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L  197 (306)
                      +   ++||+|| .|+ |+|+.+.+..+.+-+...  -..|..+..+..+|++|+..-+-   +..++.+.+.+.++...|
T Consensus       220 ivlqTlSKsfGLAGi-RvG~~~~~~~ia~iln~~--KaPYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keL  296 (375)
T KOG0633|consen  220 IVLQTLSKSFGLAGI-RVGYGAFPLSIAEILNRA--KAPYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKEL  296 (375)
T ss_pred             eehhhhhhhcCccee-EeecccccHHHHHHHHhc--cCCccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHh
Confidence            3   8999999 999 999999998877655432  23455555666666666642111   223444444444444444


Q ss_pred             HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----CCCEEEEeCCCCCCHHHHHHHHHH
Q 021893          198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-----HDTIVRLTPPLSISSNELQEGSKA  272 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~~lRi~~~~~~t~~~i~~~~~~  272 (306)
                      .+...-.  . +......+++.+.+...+.+.......+.+-..||.++..     -.|++|+..   -++|+-.-+++.
T Consensus       297 t~v~~~~--~-~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitv---Gt~EentvL~k~  370 (375)
T KOG0633|consen  297 TEVPFLN--D-YPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITV---GTPEENTVLMKC  370 (375)
T ss_pred             hcCcccc--C-CCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEc---CCcccchHHHHH
Confidence            4432110  0 1233355666666654221222223344455669999853     468999983   366777888888


Q ss_pred             HHHH
Q 021893          273 LHDV  276 (306)
Q Consensus       273 l~~~  276 (306)
                      |++.
T Consensus       371 ~K~~  374 (375)
T KOG0633|consen  371 LKQF  374 (375)
T ss_pred             HHhh
Confidence            8765

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.50  E-value=3.7e-13  Score=121.56  Aligned_cols=219  Identities=11%  Similarity=0.038  Sum_probs=134.6

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE  119 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~  119 (306)
                      .+++..+.+.++++++   +++++|++|.+.|+++.+.+    +++|+++|+++|+++|+|+++...      ..+....
T Consensus       132 ~~vd~~~~e~l~~al~---~~TklV~lesPsNP~l~v~d----l~~I~~la~~~g~~vvVD~t~a~p------~~~~pl~  198 (395)
T PRK05967        132 EYYDPEIGAGIAKLMR---PNTKVVHTEAPGSNTFEMQD----IPAIAEAAHRHGAIVMMDNTWATP------LYFRPLD  198 (395)
T ss_pred             EEeCCCCHHHHHHhcC---cCceEEEEECCCCCCCcHHH----HHHHHHHHHHhCCEEEEECCccCc------eecChhH
Confidence            3444456688998887   57999999999999887777    999999999999999999999732      1123333


Q ss_pred             CCCcEE--EecccccC--CcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893          120 VRPDMV--ILGKALGG--GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ  195 (306)
Q Consensus       120 ~~~d~~--s~sK~~~~--G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~  195 (306)
                      +.+|++  |.+|.++|  .. -+|+++.++++++.+...........++..+......++.+...  .++..++...+.+
T Consensus       199 ~GaDivv~S~tKy~~Gh~d~-~~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~Tl~lR--~~~~~~na~~lA~  275 (395)
T PRK05967        199 FGVDISIHAATKYPSGHSDI-LLGTVSANEKCWPQLLEAHGTLGLCAGPDDTYQILRGLRTMGIR--LEHHRKSALEIAR  275 (395)
T ss_pred             cCCCEEEEecccccCCCCCe-eEEEEEcCHHHHHHHHHHHHHcCCCCCHHHHHHHHcCcccHHHH--HHHHHHHHHHHHH
Confidence            445544  88899984  55 67777778776665543222223345666666666666555432  4455566666666


Q ss_pred             HHHHHH----hhCCCce---------eeEEEeeeEEEEEEecCC--ChhhHHHHHHHHHH--CCceec-------c----
Q 021893          196 HLFKIQ----QQFPNYV---------KEVRGRGLFNAVEFDKTA--LPVSAYDICLKMKE--RGILAK-------P----  247 (306)
Q Consensus       196 ~L~~~~----~~~~~~~---------~~~~~~g~~~~i~~~~~~--~~~~~~~~~~~l~~--~Gi~~~-------~----  247 (306)
                      .|++..    ..+|+..         ....+.|.++.|++....  .......|.+.|.=  .++-.+       +    
T Consensus       276 ~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sLi~~~~~~  355 (395)
T PRK05967        276 WLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDALEIFGLGYSWGGYESLALHVKLG  355 (395)
T ss_pred             HHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhCCcceEccCCCCcceeeeeCCCC
Confidence            666542    1111110         122356888899886310  01234455554432  111111       0    


Q ss_pred             --------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          248 --------THDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       248 --------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                              ..++.+|++..+    ||.+.+++-|+++++
T Consensus       356 ~~~~~~~~~~~~liRlSvGl----Ed~~dLi~Dl~~Al~  390 (395)
T PRK05967        356 DRTVAKAPYAGPVIRLQIGL----EDVPDLKADLERGFA  390 (395)
T ss_pred             hhHhhhccCCCCeEEEEecc----CCHHHHHHHHHHHHH
Confidence                    123589999543    566777777777776

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.50  E-value=1.1e-12  Score=113.05  Aligned_cols=221  Identities=17%  Similarity=0.166  Sum_probs=143.0

Q ss_pred             CHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCC
Q 021893           46 DITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRP  122 (306)
Q Consensus        46 d~~~le~~i~~---~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~  122 (306)
                      ++++++..|+.   |...+.+++.+..++.+|. +.+.++|++|.++|+++|+.|.+|.+.-...-.....+...|....
T Consensus       113 t~e~v~~~i~~~d~~~~~~~~~~~e~~~te~Gt-Vy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~  191 (342)
T COG2008         113 TPEDVEAAIRPDDIHHAPTPLAVLENTATEGGT-VYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYV  191 (342)
T ss_pred             CHHHHHHhhcCCCcccCCCceEEEeeccCCCce-ecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhC
Confidence            79999998884   2245666666666666664 5689999999999999999999999885321111223334444556


Q ss_pred             cEEE--ecccccCCcccce-eeEeCHHHHhhcCCC--CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Q 021893          123 DMVI--LGKALGGGVIPVS-AVLADKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHL  197 (306)
Q Consensus       123 d~~s--~sK~~~~G~~~~g-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L  197 (306)
                      |.++  +||+.  |. +.| .+.++.+++++++..  ..++.+....+..++...+++..--.....|-++..++|.+.+
T Consensus       192 D~v~~~~tK~g--~~-~~gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~  268 (342)
T COG2008         192 DSVSFCLTKGG--GA-PVGAIVFGNRDFAKRARRWRKRAGGLMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGL  268 (342)
T ss_pred             CEEEEecccCC--cc-eeeeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhh
Confidence            7665  45654  45 666 456799988876532  2333444445555555555543211112233344466666666


Q ss_pred             HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      ++.    ++.....+...+++.+.+++.  ..+...+...+...|++..+.+ ..+|++.+..++++|++.++..+++..
T Consensus       269 ~~~----~G~~~~~~~~tN~vf~~l~~~--~i~~l~~~~~~~~~~~~~~~~~-~~vRfvts~a~~~edv~~~~~~~~~~~  341 (342)
T COG2008         269 EAK----PGVKLAFPVETNMVFVRLPES--AIEALRLAGALFYRGVLIGAHG-EIVRFVTSWATSEEDVDELVAAIKALL  341 (342)
T ss_pred             hhc----CCceeccCCcccEEEEECChH--HHHHHHhhchhheeeeeccCCC-ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence            643    234444446778888888752  2345556677777788877754 589999999999999999999888754

>PRK05939 hypothetical protein; Provisional

Probab=99.50  E-value=2.6e-13  Score=123.36  Aligned_cols=94  Identities=16%  Similarity=0.250  Sum_probs=71.8

Q ss_pred             cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893           39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE  118 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~  118 (306)
                      +.+++..|+++++++++   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+|++|+.    +..+....+
T Consensus       113 v~~v~~~d~e~l~~~l~---~~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~t~a~----~~~~~~~~~  181 (397)
T PRK05939        113 VTMVDATDVQNVAAAIR---PNTRMVFVETIANPGTQVAD----LAGIGALCRERGLLYVVDNTMTS----PWLFRPKDV  181 (397)
T ss_pred             EEEECCCCHHHHHHhCC---CCCeEEEEECCCCCCCCHHh----HHHHHHHHHHcCCEEEEECCccc----ccccCcccc
Confidence            35566678999999997   57999999999999998887    99999999999999999999862    111111122


Q ss_pred             CCCCcEEEecccccC-CcccceeeEeC
Q 021893          119 EVRPDMVILGKALGG-GVIPVSAVLAD  144 (306)
Q Consensus       119 ~~~~d~~s~sK~~~~-G~~~~g~~~~~  144 (306)
                      +.+..+.|++|.++| |. .+|+++..
T Consensus       182 gaDivv~S~sK~~~g~g~-~igg~v~~  207 (397)
T PRK05939        182 GASLVINSLSKYIAGHGN-ALGGAVTD  207 (397)
T ss_pred             CCEEEEecCeecccCCCC-eEEEEEec
Confidence            333334588899995 77 88877664

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.50  E-value=6.6e-13  Score=119.38  Aligned_cols=206  Identities=10%  Similarity=0.038  Sum_probs=143.2

Q ss_pred             HHHH-HHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEe
Q 021893           49 ALEK-IFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVIL  127 (306)
Q Consensus        49 ~le~-~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~  127 (306)
                      ++++ .++   +++++|.+.++.+++|.+.++   +++|      +|+++++|.+++ +  .+..+..+.+  +.-+.+.
T Consensus       132 ~~~~~~l~---~~~~~V~~th~eTstGv~~~~---i~~i------~g~l~vVDavss-~--g~~~idv~~~--d~~~~ss  194 (360)
T PRK05355        132 PLDEWQLS---DDAAYVHYTSNETIDGTEFHE---LPDT------GDVPLVADMSSD-I--LSRPIDVSKF--GLIYAGA  194 (360)
T ss_pred             ChhhccCC---CCCCEEEEccCCCcceEecCc---cccc------CCCcEEEEcCcc-c--cCccCCHHHc--cEEEEec
Confidence            3333 554   468999999999999988621   6655      899999999998 1  2233334433  2223344


Q ss_pred             cccccCCcccceeeEeCHHHHhhcCCC-C-----------ccCCCCCCHHHHHHHHHHHHHHhhc----cHHHHHHHHHH
Q 021893          128 GKALGGGVIPVSAVLADKEVMLCIQPG-E-----------HGSTFGGNPLASAVAIASLDVIRDE----KLAERSAHLGE  191 (306)
Q Consensus       128 sK~~~~G~~~~g~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~~~aa~~al~~~~~~----~~~~~~~~~~~  191 (306)
                      .|.++ .. ++|++++++++++++.+. .           ....+++|...+.+..++++.+.++    ++.++.+++.+
T Consensus       195 qK~lg-P~-Glg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~  272 (360)
T PRK05355        195 QKNIG-PA-GLTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAA  272 (360)
T ss_pred             ccccc-CC-ceEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence            59986 44 789999999999887662 1           1122456677888888999998765    35678888888


Q ss_pred             HHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHH
Q 021893          192 ELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQE  268 (306)
Q Consensus       192 ~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~  268 (306)
                      ++++.|+++....  ..... ......+.+.++.   .....++.+.+.++|+.+.++.  .+.+|+|+..++|.+||+.
T Consensus       273 ~l~~~l~~~~~~~--~~~~~~~rs~~v~sf~~~~---~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~  347 (360)
T PRK05355        273 LLYDAIDSSDFYR--NPVAPEDRSRMNVPFTLAD---EELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQA  347 (360)
T ss_pred             HHHHHHHhCCCcc--cCCChhhcCCcEEEEEcCC---hHHHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHH
Confidence            8888888874110  10111 1233556666654   2334567788899999986553  4789999999999999999


Q ss_pred             HHHHHHHHHh
Q 021893          269 GSKALHDVLE  278 (306)
Q Consensus       269 ~~~~l~~~l~  278 (306)
                      +++.|+++++
T Consensus       348 l~~~l~~~~~  357 (360)
T PRK05355        348 LVDFMKEFER  357 (360)
T ss_pred             HHHHHHHHHH
Confidence            9999999876

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.50  E-value=2.3e-13  Score=122.56  Aligned_cols=240  Identities=19%  Similarity=0.157  Sum_probs=140.3

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+||.....|+|........         +......+.+++..|+++++++++   +++++|++|.+.|++..+++    
T Consensus        95 d~iv~~~~~Y~~t~~~~~~~---------l~~~gv~v~~~d~~d~~~l~~~l~---~~t~~v~~EspsNP~l~v~D----  158 (386)
T PF01053_consen   95 DHIVASDDLYGGTYRLLEEL---------LPRFGVEVTFVDPTDLEALEAALR---PNTKLVFLESPSNPTLEVPD----  158 (386)
T ss_dssp             BEEEEESSSSHHHHHHHHHC---------HHHTTSEEEEESTTSHHHHHHHHC---TTEEEEEEESSBTTTTB-------
T ss_pred             CceEecCCccCcchhhhhhh---------hcccCcEEEEeCchhHHHHHhhcc---ccceEEEEEcCCCccccccc----
Confidence            56777777776543221111         111223346777789999999999   58999999999999988888    


Q ss_pred             HHHHHHHHHHcC-CEEEEehhhhcccccccccccccCCCCCcEE--EecccccC-CcccceeeEeC--HHHHhhcCCCCc
Q 021893           83 LKAVRDLCSKYN-ILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLAD--KEVMLCIQPGEH  156 (306)
Q Consensus        83 l~~i~~l~~~~g-i~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~g~~~~~--~~~~~~~~~~~~  156 (306)
                      |++|+++|+++| +++++|++.+..      +.++.+....|++  |.+|.++| +-.-.|.++.+  +++++.++....
T Consensus       159 l~~i~~~a~~~g~~~~vVDnT~atp------~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~  232 (386)
T PF01053_consen  159 LEAIAKLAKEHGDILVVVDNTFATP------YNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRR  232 (386)
T ss_dssp             HHHHHHHHHHTTT-EEEEECTTTHT------TTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCceEEeeccccce------eeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhh
Confidence            999999999998 999999998621      2234444456655  77899983 32145667765  466665543222


Q ss_pred             cCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCcee------------------eEEEeeeEE
Q 021893          157 GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVK------------------EVRGRGLFN  218 (306)
Q Consensus       157 ~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~------------------~~~~~g~~~  218 (306)
                      ......++..+......++.+...  .++..++...+.+.|++..     .+.                  ...+.|.++
T Consensus       233 ~~G~~~~p~da~ll~rgl~Tl~~R--~~~~~~nA~~lA~~L~~hp-----~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~  305 (386)
T PF01053_consen  233 LLGATLSPFDAWLLLRGLRTLPLR--MERQNENAEALAEFLEEHP-----KVKRVYYPGLPSHPQHELAKRQMSGGGGLL  305 (386)
T ss_dssp             HHT-B--HHHHHHHHHHHTTHHHH--HHHHHHHHHHHHHHHHTST-----TEEEEEETTSTTSTTHHHHHHHCSSCTSEE
T ss_pred             hcCccchHHHHHHHhcCCCcHHHH--HHHHHHHHHHHHHHHHhCC-----CCCeEEEcccccccceeeeeecccccCcee
Confidence            222233445544444455443321  4555566666666666642     222                  222556688


Q ss_pred             EEEEecCCChh-hHHHHHHHHHHC--Cceec--------cC-----------------CCCEEEEeCCCCCCHHHHHHHH
Q 021893          219 AVEFDKTALPV-SAYDICLKMKER--GILAK--------PT-----------------HDTIVRLTPPLSISSNELQEGS  270 (306)
Q Consensus       219 ~i~~~~~~~~~-~~~~~~~~l~~~--Gi~~~--------~~-----------------~~~~lRi~~~~~~t~~~i~~~~  270 (306)
                      .|++..   .. ....|.+.|.=-  |.-.+        |.                 .++.||++..    -||.+.++
T Consensus       306 sf~l~~---~~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvG----lEd~~dLi  378 (386)
T PF01053_consen  306 SFELKG---GEEAARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVG----LEDPDDLI  378 (386)
T ss_dssp             EEEESS---HHHHHHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE------SS-HHHHH
T ss_pred             EEEecc---chhhhHhHHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEec----cCCHHHHH
Confidence            999885   32 455666666421  21111        11                 2478999943    36778888


Q ss_pred             HHHHHHHh
Q 021893          271 KALHDVLE  278 (306)
Q Consensus       271 ~~l~~~l~  278 (306)
                      +.|+++++
T Consensus       379 ~Dl~~AL~  386 (386)
T PF01053_consen  379 ADLEQALE  386 (386)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHhcC
Confidence            88888764

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.49  E-value=3.2e-13  Score=122.10  Aligned_cols=217  Identities=14%  Similarity=0.124  Sum_probs=131.3

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE  119 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~  119 (306)
                      .+++..|+++++++++   +++++|+++.++|++|...+    +++|.++|+++|+++|+|++|... ..+...   .++
T Consensus       117 ~~v~~~d~~~l~~ai~---~~tklV~le~P~NPtg~~~d----l~~I~~la~~~g~~lvvD~a~~~~-~~~~p~---~~g  185 (377)
T PRK07671        117 TFVDTSNLEEVEEAIR---PNTKAIYVETPTNPLLKITD----IKKISTIAKEKGLLTIVDNTFMTP-YWQSPI---SLG  185 (377)
T ss_pred             EEECCCCHHHHHHhcC---CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCCcc-ccCChh---hhC
Confidence            4455668999999997   57899999999999998888    999999999999999999999631 111211   123


Q ss_pred             CCCcEEEecccccC--CcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 021893          120 VRPDMVILGKALGG--GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQH  196 (306)
Q Consensus       120 ~~~d~~s~sK~~~~--G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~  196 (306)
                      .+..+.|++|.++|  +. -.|++++ ++++++.+...........++.....++..++.+..  ..++.+++...+.+.
T Consensus       186 ~Divv~S~sK~l~G~~~~-~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~tl~~--R~~~~~~na~~la~~  262 (377)
T PRK07671        186 ADIVLHSATKYLGGHSDV-VAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGLKTLGI--RMEEHETNSRAIAEF  262 (377)
T ss_pred             CeEEEecCcccccCCccc-eeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCcChHHH--HHHHHHHHHHHHHHH
Confidence            22334477899984  22 3455555 567777665433332333455555555555544433  245555666666666


Q ss_pred             HHHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHH--HCCceec--------cC-----
Q 021893          197 LFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMK--ERGILAK--------PT-----  248 (306)
Q Consensus       197 L~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~--~~Gi~~~--------~~-----  248 (306)
                      |++...    .+|...         ....+.|.++.|++..   ......|.+.|.  ..+.-.+        |.     
T Consensus       263 L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~---~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~  339 (377)
T PRK07671        263 LNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVGS---EETANKVLERLQYFTLAESLGAVESLISIPSQMTHA  339 (377)
T ss_pred             HHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeCC---HHHHHHHHHhCCcceEccCCCCCCeEeECCCccccc
Confidence            665321    111100         1234567888888832   334455555553  1111111        11     


Q ss_pred             ------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          249 ------------HDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       249 ------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                                  .++.||++..    -||.+.+++-|++++
T Consensus       340 ~~~~~~~~~~gi~~~liR~svG----lE~~~dl~~dl~~al  376 (377)
T PRK07671        340 SIPADRRKELGITDGLIRISVG----IEDGEDLIEDLAQAL  376 (377)
T ss_pred             cCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHh
Confidence                        2578999944    356777777777765

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.49  E-value=2.1e-13  Score=125.04  Aligned_cols=93  Identities=20%  Similarity=0.238  Sum_probs=73.3

Q ss_pred             cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893           39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE  118 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~  118 (306)
                      +..++.+|+++++++++   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+|++|+..    .  .....
T Consensus       124 v~~v~~~d~~~l~~~l~---~~t~~V~le~p~NPtg~v~d----l~~I~~la~~~~i~livD~t~~~~----~--~~~~l  190 (418)
T TIGR01326       124 VRFVDPDDPEEFEKAID---ENTKAVFAETIGNPAINVPD----IEAIAEVAHAHGVPLIVDNTFATP----Y--LCRPI  190 (418)
T ss_pred             EEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCchh----h--cCCch
Confidence            34556679999999997   47899999999999998888    999999999999999999999621    1  11222


Q ss_pred             CCCCcEE--EecccccC-CcccceeeEeCH
Q 021893          119 EVRPDMV--ILGKALGG-GVIPVSAVLADK  145 (306)
Q Consensus       119 ~~~~d~~--s~sK~~~~-G~~~~g~~~~~~  145 (306)
                      ....|++  |++|.++| |. ++|++++++
T Consensus       191 ~~g~Divv~S~sK~l~g~G~-~lGg~v~~~  219 (418)
T TIGR01326       191 DHGADIVVHSATKYIGGHGT-AIGGVIVDG  219 (418)
T ss_pred             hcCCeEEEECccccccCCcc-ceEEEEEec
Confidence            2345655  88899995 88 999988854

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.48  E-value=2.4e-12  Score=116.72  Aligned_cols=212  Identities=17%  Similarity=0.214  Sum_probs=126.9

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc-ccccccccccCCCCCc
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA-RSGRMLASDWEEVRPD  123 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~-~~g~~~~~~~~~~~~d  123 (306)
                      .|+++++++++   +++++|++.+   ++|...+    +++|.++|++||+++|+|++|+-.. ..|...     +...|
T Consensus       107 ~d~~~le~~i~---~~tk~i~~~~---~~G~~~~----~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~-----g~~~~  171 (375)
T PRK11706        107 IDETLIEAAIT---PKTRAIVPVH---YAGVACE----MDTIMALAKKHNLFVVEDAAQGVMSTYKGRAL-----GTIGH  171 (375)
T ss_pred             cCHHHHHHhcC---CCCeEEEEeC---CCCCccC----HHHHHHHHHHcCCEEEEECccccccccCCeee-----ecCcC
Confidence            37899999887   4677777643   4676666    8999999999999999999998221 222211     22237


Q ss_pred             EEEec----ccccCCcccceeeEeCHHHHhhcCCCCc---------------------cCCCCCCHHHHHHHHHHHHHHh
Q 021893          124 MVILG----KALGGGVIPVSAVLADKEVMLCIQPGEH---------------------GSTFGGNPLASAVAIASLDVIR  178 (306)
Q Consensus       124 ~~s~s----K~~~~G~~~~g~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~aa~~al~~~~  178 (306)
                      +.+||    |.+++|. +.+++..++++.++++....                     +..+..+.+..+.+...++.+ 
T Consensus       172 ~~~~Sf~~~K~l~~g~-gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l-  249 (375)
T PRK11706        172 IGCFSFHETKNYTAGE-GGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAA-  249 (375)
T ss_pred             EEEEeCCCCccccccC-CeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHH-
Confidence            77777    9998776 66677777887764432110                     111122334444444555443 


Q ss_pred             hccHHHHHHHHHHHHHHHHHHHHh----hCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC------
Q 021893          179 DEKLAERSAHLGEELRQHLFKIQQ----QFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------  248 (306)
Q Consensus       179 ~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------  248 (306)
                       ++..++.+++.+.+++.|..+..    .++...........++++.+++   ..+..++.+.|.++||.++..      
T Consensus       250 -~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~r~~l~~~L~~~gI~~~~~~~p~~~  325 (375)
T PRK11706        250 -DRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRD---LEDRSALINFLKEAGIMAVFHYIPLHS  325 (375)
T ss_pred             -HHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECC---cCCHHHHHHHHHHCCCCccccCCccCc
Confidence             33455555666666666655421    1010000111233445555543   345778999999999986521      


Q ss_pred             --------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          249 --------------------HDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       249 --------------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                                          ....+.+=++...+++|++..++.|++++
T Consensus       326 ~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~  374 (375)
T PRK11706        326 SPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF  374 (375)
T ss_pred             chhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence                                01233333334578899999999998765

>PLN02509 cystathionine beta-lyase

Probab=99.48  E-value=4.7e-13  Score=123.22  Aligned_cols=216  Identities=11%  Similarity=0.123  Sum_probs=135.3

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE  119 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~  119 (306)
                      ..++..|++++++.++   +++++|+++.++|++|.+.+    +++|.++|++||+++|+|++|... ..+..     .+
T Consensus       200 ~~vd~~d~e~l~~ai~---~~TklV~lesPsNPtG~i~D----l~~I~~lAk~~g~~lIVD~A~a~~-~~~~p-----l~  266 (464)
T PLN02509        200 KRVNTTNLDEVAAAIG---PQTKLVWLESPTNPRQQISD----IRKIAEMAHAQGALVLVDNSIMSP-VLSRP-----LE  266 (464)
T ss_pred             EEeCCCCHHHHHHhCC---cCCeEEEEECCCCCCCCHHH----HHHHHHHHHHcCCEEEEECCcccc-ccCCh-----hh
Confidence            4456678999998886   57899999999999998877    999999999999999999998621 11221     22


Q ss_pred             CCCcEE--EecccccC--CcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 021893          120 VRPDMV--ILGKALGG--GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELR  194 (306)
Q Consensus       120 ~~~d~~--s~sK~~~~--G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~  194 (306)
                      ...|++  |++|+++|  +. -.|+++++ +.+.+.++..........++..+..++..++.+..  ..++.+++...+.
T Consensus       267 ~gaDivv~S~tK~l~G~gdv-~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~tL~~--R~~r~~~nA~~la  343 (464)
T PLN02509        267 LGADIVMHSATKFIAGHSDV-MAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMAL--RIEKQQENARKIA  343 (464)
T ss_pred             cCCcEEEecCcccccCCCcc-ceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhhhhHHH--HHHHHHHHHHHHH
Confidence            345554  77799984  33 45667764 44444333211112223466667777777776643  3566777777777


Q ss_pred             HHHHHHH----hhCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHH--CCceec--------cC---
Q 021893          195 QHLFKIQ----QQFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILAK--------PT---  248 (306)
Q Consensus       195 ~~L~~~~----~~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~--~Gi~~~--------~~---  248 (306)
                      +.|+...    ..+|+..         ....+.|.++.|.+..   ...+..|++.|.=  .++-.+        |.   
T Consensus       344 ~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~---~~~~~~f~~~l~l~~~a~slG~~~SLi~~p~~~s  420 (464)
T PLN02509        344 MYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS---VALSKHLVETTKYFSIAVSFGSVKSLISMPCFMS  420 (464)
T ss_pred             HHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCC---HHHHHHHHHcCCcceEcccCCCCCceeeCCcccc
Confidence            7777532    1111110         1234567888887732   2334456555541  111111        11   


Q ss_pred             --------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 --------------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 --------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                    .++.||+++.    -|+.+.+++-|+++++
T Consensus       421 h~~~~~~~~~~~Gi~~~liRlSvG----lE~~~DLi~Dl~~Al~  460 (464)
T PLN02509        421 HASIPAEVREARGLTEDLVRISAG----IEDVDDLISDLDIAFR  460 (464)
T ss_pred             cccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHc
Confidence                          2578999943    3567788888888876

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.48  E-value=4.1e-13  Score=121.16  Aligned_cols=221  Identities=10%  Similarity=0.042  Sum_probs=140.3

Q ss_pred             CcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcC--CEEEEehhhhccccccccccc
Q 021893           38 GHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN--ILMIADEIQSGLARSGRMLAS  115 (306)
Q Consensus        38 ~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~g--i~li~De~~~g~~~~g~~~~~  115 (306)
                      .+.+++..|++.++++|+   +++++|++|.+.|+++.+.+    +++|+++|+++|  +++++|++++    .+..  +
T Consensus       128 ~v~~vd~~d~~~l~~~l~---~~TrlV~~EtpsNp~~~v~D----I~~Ia~ia~~~g~g~~lvVDnT~a----~p~~--~  194 (395)
T PRK08114        128 TTTWFDPLIGADIAKLIQ---PNTKVVFLESPGSITMEVHD----VPAIVAAVRSVNPDAVIMIDNTWA----AGVL--F  194 (395)
T ss_pred             EEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCCEeec----HHHHHHHHHHhCCCCEEEEECCCc----cccc--c
Confidence            346666778999999997   57999999999999999999    999999999984  9999999997    2222  3


Q ss_pred             ccCCCCCcEE--EecccccC--CcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q 021893          116 DWEEVRPDMV--ILGKALGG--GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGE  191 (306)
Q Consensus       116 ~~~~~~~d~~--s~sK~~~~--G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~  191 (306)
                      +...+.+|++  |.+|+++|  .. .+|.++.+++.++.++..........++..+..+...++.+...  .++..++..
T Consensus       195 ~pl~~GaDivv~S~tKyl~Ghsdv-~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL~lR--~~~~~~na~  271 (395)
T PRK08114        195 KALDFGIDISIQAGTKYLVGHSDA-MIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRGLRTLGVR--LRQHEESSL  271 (395)
T ss_pred             CHHHcCCcEEEEcCcccccCCCcc-eeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcCCCcHHHH--HHHHHHHHH
Confidence            4444456665  66699985  34 67777778776665543222223344566666665555554332  456666677


Q ss_pred             HHHHHHHHHH----hhCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHH--CC--------cee--c
Q 021893          192 ELRQHLFKIQ----QQFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RG--------ILA--K  246 (306)
Q Consensus       192 ~l~~~L~~~~----~~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~--~G--------i~~--~  246 (306)
                      .+.+.|++..    ..+|+..         ....+.|.++.|++...........|++.|.-  .+        ++.  .
T Consensus       272 ~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~f~~~l~l~~~a~SlGg~~SLi~~~~  351 (395)
T PRK08114        272 KVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLANYLDNFSLFSMAYSWGGFESLILANQ  351 (395)
T ss_pred             HHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHHHHHHhCCcceeecccCCccceeccCC
Confidence            7777777542    1111110         12345788999988631001234455554432  11        111  0


Q ss_pred             c-------------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          247 P-------------THDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       247 ~-------------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      |             ..++.||++..    -|+.+.+++-|+++++
T Consensus       352 ~~~~~~~~~~~~~~~~~~liRlSvG----lEd~~DLi~Dl~~Al~  392 (395)
T PRK08114        352 PEEIAAIRPAGEVDFTGTLIRLHIG----LEDVDDLIADLAAGFA  392 (395)
T ss_pred             chhhhccCChhHhcCCCCeEEEEec----cCCHHHHHHHHHHHHH
Confidence            0             12368999944    3667778888888776

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.46  E-value=6.7e-13  Score=121.80  Aligned_cols=218  Identities=17%  Similarity=0.193  Sum_probs=130.2

Q ss_pred             cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893           39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE  118 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~  118 (306)
                      +.+++..|+++++++++   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+|++++.    +..  ....
T Consensus       131 v~~vd~~d~e~l~~ai~---~~tklV~l~sp~NPtG~v~d----i~~I~~la~~~gi~vIvD~t~a~----~~~--~~pl  197 (431)
T PRK08248        131 VKFVDPSDPENFEAAIT---DKTKALFAETIGNPKGDVLD----IEAVAAIAHEHGIPLIVDNTFAS----PYL--LRPI  197 (431)
T ss_pred             EEEECCCCHHHHHHhcC---CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEeCCCCc----ccc--CChh
Confidence            35566678999999997   47899999999999999988    99999999999999999999861    111  1111


Q ss_pred             CCCCcEE--EecccccC-CcccceeeEe-CHHHHhh-------cC--------------------------CCCccCCCC
Q 021893          119 EVRPDMV--ILGKALGG-GVIPVSAVLA-DKEVMLC-------IQ--------------------------PGEHGSTFG  161 (306)
Q Consensus       119 ~~~~d~~--s~sK~~~~-G~~~~g~~~~-~~~~~~~-------~~--------------------------~~~~~~~~~  161 (306)
                      ....|++  |++|.++| |. ++|++++ +.+....       +.                          .........
T Consensus       198 ~~gaDivv~S~tK~lgg~g~-~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~  276 (431)
T PRK08248        198 EHGADIVVHSATKFIGGHGT-SIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAA  276 (431)
T ss_pred             HcCCCEEEEcCccccCCCCC-ceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCC
Confidence            2345554  77799994 66 7876655 3321100       00                          000011123


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----hCCCcee---------eE-EEeeeEEEEEEecCCC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------EV-RGRGLFNAVEFDKTAL  227 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~---------~~-~~~g~~~~i~~~~~~~  227 (306)
                      .++..+......++.+..  ..++..++...+.+.|++...    .+|+...         .. .+.|.++.|++...  
T Consensus       277 l~p~~a~l~~rgl~tl~~--R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~--  352 (431)
T PRK08248        277 LSPFNSFLLLQGLETLHL--RMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAKKYLPKGQGAILTFGIKGG--  352 (431)
T ss_pred             CCHHHHHHHhcCcCcHHH--HHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCC--
Confidence            344444444444443322  245666777777777776431    1111110         12 35688899988631  


Q ss_pred             hhhHHHHHHHHHHC--Cceec--------cC-----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          228 PVSAYDICLKMKER--GILAK--------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       228 ~~~~~~~~~~l~~~--Gi~~~--------~~-----------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ......|.+.|.=-  ++-.+        |.                 .++.||+++.    -||.+.+++-|.++|+
T Consensus       353 ~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG----lEd~~dL~~Dl~~Al~  426 (431)
T PRK08248        353 VEAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLVRLSVG----TEAIDDILDDLRQAIR  426 (431)
T ss_pred             HHHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHH
Confidence            23344555555321  21111        10                 2578999944    3667778888888877

>PRK02769 histidine decarboxylase; Provisional

Probab=99.46  E-value=2.2e-11  Score=109.96  Aligned_cols=213  Identities=14%  Similarity=0.091  Sum_probs=144.4

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcC---CEEEEehhhhcccccc--cccccccCCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN---ILMIADEIQSGLARSG--RMLASDWEEV  120 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~g---i~li~De~~~g~~~~g--~~~~~~~~~~  120 (306)
                      |+++|+++|++++.++++|+++..++.+|.+.|    +++|.++|++||   +++++|.+|+++...-  ....++... 
T Consensus       146 d~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp----i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~-  220 (380)
T PRK02769        146 DYDDLISKIKENKNQPPIIFANIGTTMTGAIDN----IKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFAD-  220 (380)
T ss_pred             cHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC----HHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccC-
Confidence            899999999975556999999999999999999    999999999998   6999999998631110  000122212 


Q ss_pred             CCcEEEec--ccccCCcccceeeEeCHHHHhhcCCCCc-----cCCC--CCCHHHHHHHHHHHHHHhhcc---HHHHHHH
Q 021893          121 RPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEH-----GSTF--GGNPLASAVAIASLDVIRDEK---LAERSAH  188 (306)
Q Consensus       121 ~~d~~s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~~aa~~al~~~~~~~---~~~~~~~  188 (306)
                      ..|.+++|  |.+++.+ ++|+++.+++..+.+.+...     ..+.  +.+....++..++++.+..++   ..++..+
T Consensus       221 ~vDsis~s~HK~~~~P~-g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~  299 (380)
T PRK02769        221 GIDSIAISGHKFIGSPM-PCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLD  299 (380)
T ss_pred             CCCEEEECCcccCCCCC-CcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHH
Confidence            57877776  9887777 89999998877666543111     0111  234456777778888876644   4566777


Q ss_pred             HHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHH
Q 021893          189 LGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQE  268 (306)
Q Consensus       189 ~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~  268 (306)
                      +.+++.++|++..     ...........+.|..++       .++.     +|-.+.+. .+.+|++.+..++++.++.
T Consensus       300 la~~l~~~L~~~g-----~~~~~~p~~~~v~f~~~~-------~~~~-----~~w~l~~~-~~~~hi~~~~~~~~~~~~~  361 (380)
T PRK02769        300 MAQYAVDRLQANG-----IPAWRNPNSITVVFPCPS-------ERIW-----KKWHLATS-GNQAHIITMPHHNKQQIDS  361 (380)
T ss_pred             HHHHHHHHHHhCC-----CEEEcCCCceEEEEcCCC-------HHHH-----hCeeEccc-CCEEEEEECCCCCHHHHHH
Confidence            7777777776642     222222333334443221       1221     56555554 3589999988999999999


Q ss_pred             HHHHHHHHHhhhcCC
Q 021893          269 GSKALHDVLELDLPK  283 (306)
Q Consensus       269 ~~~~l~~~l~~~~~~  283 (306)
                      +++.|.+.+. -..+
T Consensus       362 f~~dl~~~~~-~~~~  375 (380)
T PRK02769        362 LIDELIFDLK-NPNK  375 (380)
T ss_pred             HHHHHHHHHh-cccc
Confidence            9999988776 4433

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.46  E-value=7.2e-13  Score=119.92  Aligned_cols=217  Identities=17%  Similarity=0.129  Sum_probs=125.7

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE  119 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~  119 (306)
                      .+++..|+++++++++   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+|++|+.. ..+..     .+
T Consensus       117 ~~vd~~d~e~l~~ai~---~~t~lV~lesP~Nptg~~~d----i~~I~~la~~~gi~vivD~t~a~~-~~~~p-----~~  183 (380)
T PRK06176        117 TIIDTSDLSQIKKAIK---PNTKALYLETPSNPLLKITD----LAQCASVAKDHGLLTIVDNTFATP-YYQNP-----LL  183 (380)
T ss_pred             EEcCCCCHHHHHHhcC---cCceEEEEECCCCCCceecC----HHHHHHHHHHcCCEEEEECCcccc-ccCCc-----cc
Confidence            4455668999999887   57999999999999998888    999999999999999999999732 11111     23


Q ss_pred             CCCcEE--EecccccC-CcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893          120 VRPDMV--ILGKALGG-GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ  195 (306)
Q Consensus       120 ~~~d~~--s~sK~~~~-G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~  195 (306)
                      ...|++  |++|.++| |-.-.|+++.+ +++.+.++..........++.........++.+..  ..++..++...+.+
T Consensus       184 ~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl~tl~~--R~~~~~~~a~~la~  261 (380)
T PRK06176        184 LGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIKTLGL--RMEAHQKNALCVAE  261 (380)
T ss_pred             cCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHH
Confidence            345555  66799974 32135556664 56666554322222222233333333333322211  12333444455555


Q ss_pred             HHHHHHh----hCCCc---------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC--Cce--------eccC----
Q 021893          196 HLFKIQQ----QFPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER--GIL--------AKPT----  248 (306)
Q Consensus       196 ~L~~~~~----~~~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~--Gi~--------~~~~----  248 (306)
                      .|++...    .+|..         .....+.|.++.|++..   ......|++.|.=-  +.-        ..|.    
T Consensus       262 ~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~---~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~  338 (380)
T PRK06176        262 FLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN---DSEAVAFVESLKLFILGESLGGVESLVGIPAFMTH  338 (380)
T ss_pred             HHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC---HHHHHHHHHcCCcceEccCCCCCCceeeCCccccc
Confidence            5554310    11100         01234568888998863   23344555544321  111        1111    


Q ss_pred             -------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 -------------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 -------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                   .++.||++..    -||.+.+++-|+++++
T Consensus       339 ~~~~~~~~~~~gi~~~liR~svG----lE~~~dli~dl~~Al~  377 (380)
T PRK06176        339 ACIPKEQREAAGIRDGLVRLSVG----IEHEQDLLEDLEQAFA  377 (380)
T ss_pred             ccCCHHHHHhcCCCcCeEEEEec----cCCHHHHHHHHHHHHh
Confidence                         2578999943    3667778888888776

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.46  E-value=1.1e-11  Score=122.76  Aligned_cols=223  Identities=13%  Similarity=0.127  Sum_probs=143.4

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |+++|+++++++++++++|++..++..++...+    +++|+++|+++|+++++|.++. +.  .+  + ...-.+..|+
T Consensus       626 D~~~L~~~i~~~~~~la~V~it~pst~G~~e~~----I~eI~~i~h~~G~~v~VDgA~~~al--~~--l-~~pg~~GADi  696 (954)
T PRK05367        626 DLDDLRAKAEEHADNLAAIMITYPSTHGVFEET----IREICEIVHEHGGQVYLDGANMNAQ--VG--L-ARPGDIGADV  696 (954)
T ss_pred             CHHHHHHHHhccCCCeEEEEEEcCCCCeeecCC----HHHHHHHHHHcCCEEEEECcChhhc--cC--C-CChhhcCCCE
Confidence            799999999876556888877776665443356    9999999999999999999996 22  11  1 1112345788


Q ss_pred             EEec--cccc-----CCcccceeeEeCHHHHhhcCCCC-----c---cCCCCCCH----HHHHHHHHHHHHHhhccHHHH
Q 021893          125 VILG--KALG-----GGVIPVSAVLADKEVMLCIQPGE-----H---GSTFGGNP----LASAVAIASLDVIRDEKLAER  185 (306)
Q Consensus       125 ~s~s--K~~~-----~G~~~~g~~~~~~~~~~~~~~~~-----~---~~~~~~~~----~~~~aa~~al~~~~~~~~~~~  185 (306)
                      ++++  |+|+     ||. .+|++.+++.+...+....     .   .+.....+    ..+..+...++.+..+++.+.
T Consensus       697 ~~~s~HK~f~~P~G~GGP-g~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~  775 (954)
T PRK05367        697 SHLNLHKTFCIPHGGGGP-GVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQA  775 (954)
T ss_pred             EEecCcccCCCCcCCCCC-ceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHH
Confidence            7766  9986     566 7888888766543333211     0   01111112    233335555566666666655


Q ss_pred             HH---HHHHHHHHHHHHHHhhCCCceeeEEE--eeeEEEEEEecCC--ChhhHHHHHHHHHHCCceecc---CCCCEEEE
Q 021893          186 SA---HLGEELRQHLFKIQQQFPNYVKEVRG--RGLFNAVEFDKTA--LPVSAYDICLKMKERGILAKP---THDTIVRL  255 (306)
Q Consensus       186 ~~---~~~~~l~~~L~~~~~~~~~~~~~~~~--~g~~~~i~~~~~~--~~~~~~~~~~~l~~~Gi~~~~---~~~~~lRi  255 (306)
                      .+   .+..++.++|++..+    ..+..+.  .-.-+.+++...+  .+....++++.|.+.|+....   ...+.+|+
T Consensus       776 a~~~~~~A~Yl~~~L~~~~~----~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~~~pv~~~l~i  851 (954)
T PRK05367        776 TEVAILNANYIAKRLKDHYP----VLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMSFPVAGTLMV  851 (954)
T ss_pred             HHHHHHHHHHHHHHHHhhcC----ccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeecCCccCCEEEE
Confidence            55   788888888877421    1111100  0001222332111  124568899999999987643   13778999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          256 TPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       256 ~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      +|.-..+++|||+++++++++.. ++.+
T Consensus       852 ~ptE~~s~~elDr~~~al~~i~~-e~~~  878 (954)
T PRK05367        852 EPTESESKAELDRFCDAMIAIRA-EIDE  878 (954)
T ss_pred             EeeecCCHHHHHHHHHHHHHHHH-HHHH
Confidence            99999999999999999998888 7654

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.45  E-value=5.3e-13  Score=120.03  Aligned_cols=182  Identities=12%  Similarity=0.104  Sum_probs=119.0

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|+++|++.++   +++++++++++++++|.+.+    +++|.++|+++|+++++|++|+ ++.  ..+..+  ...+|+
T Consensus       126 ~d~~~l~~~l~---~~~~lv~~~~~~n~tG~~~~----~~~I~~l~~~~~~~~ivD~a~~-~g~--~~~~~~--~~~~D~  193 (353)
T TIGR03235       126 IDVDELADAIR---PDTLLVSIMHVNNETGSIQP----IREIAEVLEAHEAFFHVDAAQV-VGK--ITVDLS--ADRIDL  193 (353)
T ss_pred             CCHHHHHHhCC---CCCEEEEEEcccCCceeccC----HHHHHHHHHHcCCEEEEEchhh-cCC--cccccc--ccCCCE
Confidence            37899999886   46899999999999999988    9999999999999999999997 211  122222  335677


Q ss_pred             EEec--ccccCCcccceeeEeCHHHHhh--cCCCCc-------cCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHH
Q 021893          125 VILG--KALGGGVIPVSAVLADKEVMLC--IQPGEH-------GSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGE  191 (306)
Q Consensus       125 ~s~s--K~~~~G~~~~g~~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~  191 (306)
                      +++|  |.++ .. ++|+++++++....  +.+...       ....+.+.....+..++++.+..  ++..++++++.+
T Consensus       194 ~~~s~~K~~g-p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~  271 (353)
T TIGR03235       194 ISCSGHKIYG-PK-GIGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRN  271 (353)
T ss_pred             EEeehhhcCC-CC-ceEEEEEccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            6555  9754 33 57889888775322  222111       11234456666777777777643  446678888888


Q ss_pred             HHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC
Q 021893          192 ELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT  248 (306)
Q Consensus       192 ~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~  248 (306)
                      ++++.|++.+..   ..... .....++.+.++    +.+..++.+.|.+ +|.++++
T Consensus       272 ~l~~~l~~~g~~---~~~~~~~~~~~i~~~~~~----~~~~~~v~~~L~~-~i~v~~g  321 (353)
T TIGR03235       272 QLRDALQTLGVK---LNGDPAETIPHILNFSID----GVNSEALIVNLRA-DAAVSTG  321 (353)
T ss_pred             HHHHHhccCCeE---EeCCcccccCCEEEEEeC----CcCHHHHHHHHhC-CeEEEch
Confidence            888887663211   11111 112334455443    3456788888864 8888764

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.45  E-value=3.2e-12  Score=114.44  Aligned_cols=200  Identities=12%  Similarity=0.058  Sum_probs=137.9

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccc
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPV  138 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~  138 (306)
                      +++++|.+.+..+++|...+         ++++.+++++++|.+++ +  .+..+..+.++  .-+.+..|.++ .. ++
T Consensus       129 ~~~~~v~~th~ETstGv~~~---------~l~~~~~~l~iVDavss-~--g~~~id~~~~d--~~~~ssqK~lg-P~-Gl  192 (349)
T TIGR01364       129 EDAAYVHYCANETIHGVEFR---------ELPDVKNAPLVADMSSN-I--LSRPIDVSKFG--LIYAGAQKNIG-PA-GL  192 (349)
T ss_pred             CCCCEEEEcCCCCcccEecc---------eecccCCCeEEEEcccc-c--cCccCCHHHcc--EEEEecccccC-CC-ce
Confidence            47899999999999997643         67778899999999998 1  22333344332  23335559996 44 68


Q ss_pred             eeeEeCHHHHhhcCCCC-----------ccC-CCCCCHHHHHHHHHHHHHHhhc-c---HHHHHHHHHHHHHHHHHHHHh
Q 021893          139 SAVLADKEVMLCIQPGE-----------HGS-TFGGNPLASAVAIASLDVIRDE-K---LAERSAHLGEELRQHLFKIQQ  202 (306)
Q Consensus       139 g~~~~~~~~~~~~~~~~-----------~~~-~~~~~~~~~~aa~~al~~~~~~-~---~~~~~~~~~~~l~~~L~~~~~  202 (306)
                      |+++.++++++++.+..           ... .++++...+.+..++++.+.++ +   +.++.+++.+++++.|+++..
T Consensus       193 g~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~g  272 (349)
T TIGR01364       193 TVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNG  272 (349)
T ss_pred             EEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            99999999988765421           011 2355666777788999988765 3   567777888888888888731


Q ss_pred             hCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          203 QFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       203 ~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      -+. ...... .....+.+.++..   ....++.+.+.++|+.+.++.  .+.+|+++..+++.+||+.+++.|+++++
T Consensus       273 l~~-~~~~~~~rs~~v~sf~~~~~---~~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~~~  347 (349)
T TIGR01364       273 FYR-NPVDPRNRSRMNVVFTLGNE---ELEKRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQK  347 (349)
T ss_pred             eec-cCCCHHHcCCeEEEEecCCh---hHhHHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence            110 101111 1224556665531   123577788899999666653  47899999999999999999999998765

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.44  E-value=1.2e-11  Score=113.03  Aligned_cols=223  Identities=14%  Similarity=0.156  Sum_probs=133.9

Q ss_pred             CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc-ccccccccccCCC-CC
Q 021893           46 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA-RSGRMLASDWEEV-RP  122 (306)
Q Consensus        46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~-~~g~~~~~~~~~~-~~  122 (306)
                      |+++|+++|++.. +.+.+++.+|....+|...+    +++|.++|++||+++|+|++|+... ...... ...... ..
T Consensus       190 D~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~dd----L~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~-~~g~~~Gra  264 (444)
T TIGR03531       190 DVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDD----IEEIAKICANYDIPHIVNNAYGLQSNKYMELI-NKAIKVGRV  264 (444)
T ss_pred             CHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhC----HHHHHHHHHHcCCEEEEECcCcCcChhhhhhh-hccccccCC
Confidence            8999999999653 33444444444333344455    9999999999999999999998311 111100 011112 24


Q ss_pred             cEE--EecccccCCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHH
Q 021893          123 DMV--ILGKALGGGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHL  197 (306)
Q Consensus       123 d~~--s~sK~~~~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L  197 (306)
                      |++  +++|.+.... ..|.++. ++++++.+........  .+...+.+....+..-.+  +++.++..++.+++.+.|
T Consensus       265 d~vv~s~hK~l~~pg-~Gg~I~~~d~el~~~i~~~y~g~~--~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L  341 (444)
T TIGR03531       265 DAVVSSTDKNFMVPV-GGAIIYSFDENFIQEISKSYPGRA--SASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELL  341 (444)
T ss_pred             CeEEEeCccCCCCCC-CEEEEEECCHHHHHHHHHhccCCC--CChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence            555  5569887322 2344546 6778777765322211  222333333333322222  446777888899999999


Q ss_pred             HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCce----eccCC--------------------CCEE
Q 021893          198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL----AKPTH--------------------DTIV  253 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~----~~~~~--------------------~~~l  253 (306)
                      +++..+....+...+.....+.+.+.... +.+..++...|..++|.    +.++.                    ..++
T Consensus       342 ~~l~~~~~~~~~~~~~n~is~~~~~~~~~-~~~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~  420 (444)
T TIGR03531       342 QKLAERHGERLLDTPENPISSAMTLSTLK-GKDPTMLGSMLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYI  420 (444)
T ss_pred             HHHHHhhCcEeecCCCCceeEEEeccccc-ccCHHHHHHHHHhCCCCCceeecCCCceEECCEEeecccccccCCCchhH
Confidence            99887765455555554444555555321 34577888999888652    22211                    1244


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          254 RLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       254 Ri~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      -++..+.++++|++.++++|++.+
T Consensus       421 ~~~~~~g~~~~~~~~~~~~l~~~~  444 (444)
T TIGR03531       421 TAAAAIGMTKEDVDTFVSRLEKSL  444 (444)
T ss_pred             HHHHHhCCcHHHHHHHHHHHhhcC
Confidence            444456789999999999998753

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.42  E-value=6.5e-11  Score=116.84  Aligned_cols=210  Identities=13%  Similarity=0.113  Sum_probs=142.9

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc--------CCEEEEehhhhcccccccccccccCCCCCcEEEec--
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--------NILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--  128 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~--------gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~s--  128 (306)
                      +++++|.+.+++|.+|.+.|    ++.|..+++..        ++++++|.+|+    .|. ..++...+.+|++++|  
T Consensus       191 ~~t~LVa~~~vsN~tG~i~p----i~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~----~g~-~piDv~~~~~Dfl~~S~H  261 (805)
T PLN02724        191 EAYNLFAFPSECNFSGAKFP----LDLVKLIKDNQHSNFSKSGRWMVLLDAAKG----CGT-SPPDLSRYPADFVVVSFY  261 (805)
T ss_pred             CCcceEEEEccccCCCCcCC----HHHHHHHHHhcccccccCcceEEEeehhhh----cCC-CCCChhhcCCCEEEEecc
Confidence            46789999999999999998    87765555432        36899999997    222 1233334567887666  


Q ss_pred             ccccCCcccceeeEeCHHHHhhcCCCCccC------------------------CCCCCHHHHHHHHHHHHHHhh---cc
Q 021893          129 KALGGGVIPVSAVLADKEVMLCIQPGEHGS------------------------TFGGNPLASAVAIASLDVIRD---EK  181 (306)
Q Consensus       129 K~~~~G~~~~g~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~aa~~al~~~~~---~~  181 (306)
                      |.+|+.. ++|++++++++++.+.+...++                        ..+.|..+++++.++++.+..   +.
T Consensus       262 K~~GgP~-G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~  340 (805)
T PLN02724        262 KIFGYPT-GLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISA  340 (805)
T ss_pred             eeccCCC-CceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHH
Confidence            9887555 7899999998877776532211                        013466777777788888766   55


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhCC-CceeeE---------EEeeeEEEEEEecCC-ChhhHHHHHHHHHHCCceeccC--
Q 021893          182 LAERSAHLGEELRQHLFKIQQQFP-NYVKEV---------RGRGLFNAVEFDKTA-LPVSAYDICLKMKERGILAKPT--  248 (306)
Q Consensus       182 ~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~---------~~~g~~~~i~~~~~~-~~~~~~~~~~~l~~~Gi~~~~~--  248 (306)
                      +.++..++.+++.+.|.++....+ +.+...         ...+..+.|.+.... ......++...+.++||.++.+  
T Consensus       341 I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~  420 (805)
T PLN02724        341 IAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCF  420 (805)
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccc
Confidence            678888999999998887742110 011111         135567777776432 1122344555555668887632  


Q ss_pred             -------------------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 -------------------------------------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 -------------------------------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                                           ..+++|+|++.++|.+||+.+++.|++.+-
T Consensus       421 Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~  487 (805)
T PLN02724        421 CNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFV  487 (805)
T ss_pred             cCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhh
Confidence                                                 127899999999999999999999999775

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.42  E-value=4.9e-11  Score=115.99  Aligned_cols=222  Identities=13%  Similarity=0.137  Sum_probs=142.4

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |+++|+++++++++++++|.+..+++.++...+    +++|+++|+++|+++++|.++.    .+.......-.+..|++
T Consensus       627 Dle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~----V~eI~~iah~~Galv~vDgA~~----~a~~~l~~Pg~~GADi~  698 (954)
T PRK12566        627 DLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEG----IREICEVVHQHGGQVYMDGANL----NAQVGLARPADIGADVS  698 (954)
T ss_pred             CHHHHHHHhhccCCCEEEEEEEecCcCceecch----HHHHHHHHHHcCCEEEEEeeCh----hhccCCCChhhcCCCEE
Confidence            899999999876678888888888776654444    9999999999999999999996    11111011224567887


Q ss_pred             Eec--cccc-----CCcccceeeEeCHHHHhhcCCCC-------------ccCCCCCCHHHHHHHHHHHHHHhhccHHH-
Q 021893          126 ILG--KALG-----GGVIPVSAVLADKEVMLCIQPGE-------------HGSTFGGNPLASAVAIASLDVIRDEKLAE-  184 (306)
Q Consensus       126 s~s--K~~~-----~G~~~~g~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~aa~~al~~~~~~~~~~-  184 (306)
                      .++  |+|+     ||. .+|.+..++.+...+....             .+...+++...+.++..-++.+..+ +.+ 
T Consensus       699 ~~s~HKtf~~P~G~GGP-~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~a  776 (954)
T PRK12566        699 HMNLHKTFCIPHGGGGP-GMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQ-LADA  776 (954)
T ss_pred             EecCCcccCcCccCCCC-ccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHH-HHHH
Confidence            665  9886     565 6777777775443333211             1111123334455555556665554 322 


Q ss_pred             --HHHHHHHHHHHHHHHHHhhCCCceeeEEEee--eEEEEEEecCC--ChhhHHHHHHHHHHCCceec----cCCCCEEE
Q 021893          185 --RSAHLGEELRQHLFKIQQQFPNYVKEVRGRG--LFNAVEFDKTA--LPVSAYDICLKMKERGILAK----PTHDTIVR  254 (306)
Q Consensus       185 --~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g--~~~~i~~~~~~--~~~~~~~~~~~l~~~Gi~~~----~~~~~~lR  254 (306)
                        ....+..+++++|.+.   + +..+.....-  .-+.+.+...+  .+.+..++.++|.+.|+...    | ..+.+|
T Consensus       777 a~~ailnAnYla~rL~~~---~-~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~~fP-v~~~Lm  851 (954)
T PRK12566        777 SEVAILSANYLANQLGGA---F-PVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTMSFP-VPGTLM  851 (954)
T ss_pred             HHHHHHHHHHHHHHhHhh---C-CCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEEeec-cCCEEE
Confidence              2245777888888763   2 1222211001  11222222111  13456789999999887754    3 377899


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          255 LTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       255 i~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      ++|.-..+++|||+++++++++.+ ++.+
T Consensus       852 IepTE~eskeEIDrf~eAL~~I~~-e~~~  879 (954)
T PRK12566        852 VEPTESESKAELDRFVEAMLSIRA-EIGK  879 (954)
T ss_pred             EEeeeeCCHHHHHHHHHHHHHHHH-HHHH
Confidence            999999999999999999999988 7543

>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.42  E-value=4e-12  Score=109.93  Aligned_cols=227  Identities=19%  Similarity=0.235  Sum_probs=152.2

Q ss_pred             CcccccCCCHHHHHHHHHhcC------Cc----EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c-
Q 021893           38 GHLKVDFGDITALEKIFKESG------DQ----IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-  105 (306)
Q Consensus        38 ~~~~~~~~d~~~le~~i~~~~------~~----~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-  105 (306)
                      .+.+|.|||++++|..+.+..      ++    .+.++++..+.++|.+++    +++|.++..+|...+|.||.++ | 
T Consensus       201 ~i~~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p----l~~iv~lk~Kyk~RvildEs~SfG~  276 (467)
T KOG1358|consen  201 TISYFKHNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP----LPEIVKLKNKYKFRVILDESLSFGV  276 (467)
T ss_pred             eeEEecCCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc----cHHHHHHHhhheEEEEEeccccccc
Confidence            368899999999998887642      11    577889999999999999    9999999999999999999998 4 


Q ss_pred             ccccccccccccCCCC---CcEEEec--cccc--CCcccceeeEeCHHHHhhcCCCCccCCC--CCCHHHHHHHHHHHHH
Q 021893          106 LARSGRMLASDWEEVR---PDMVILG--KALG--GGVIPVSAVLADKEVMLCIQPGEHGSTF--GGNPLASAVAIASLDV  176 (306)
Q Consensus       106 ~~~~g~~~~~~~~~~~---~d~~s~s--K~~~--~G~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~aa~~al~~  176 (306)
                      +|..|.+. .+++++.   .|+++.|  -+++  ||+     ++++.-+.+.-+-...+..|  +.++....+|..++..
T Consensus       277 lg~~GrGv-teH~~v~~~~iDiv~~sm~~alas~GgF-----c~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i  350 (467)
T KOG1358|consen  277 LGKTGRGV-TEHFGVPITDIDIVTASMETALASGGGF-----CAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILI  350 (467)
T ss_pred             ccccCccc-cccCCCCccceeeeeecccccccccCce-----eecceeeEeeeeccccceeeeccCchhhhhhHHHHHHH
Confidence            57777776 6777764   3555444  4444  455     66655544433332333334  3355666677777777


Q ss_pred             Hhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-----ChhhHHHHHHHHHHCCceeccC--
Q 021893          177 IRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----LPVSAYDICLKMKERGILAKPT--  248 (306)
Q Consensus       177 ~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-----~~~~~~~~~~~l~~~Gi~~~~~--  248 (306)
                      +.. .+..+.+++....+.+.|+...    ...........++.+.+....     ...-.++++..++.+|+.+...  
T Consensus       351 ~~~~p~~~~~L~~k~~~~H~~l~~~s----~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~  426 (467)
T KOG1358|consen  351 EEWNPEIVQPLRAKVAKFHAALSSNS----GFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKY  426 (467)
T ss_pred             HhhCcchhhhhhccccccchhhhcCC----ceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhhh
Confidence            665 3455566666666666666632    011111222233333333211     1112456778887778877632  


Q ss_pred             --------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 --------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 --------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                              -+..+|++++..+++++++.+++.|+++..
T Consensus       427 ~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~  464 (467)
T KOG1358|consen  427 LEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVAS  464 (467)
T ss_pred             hhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence                    256899999999999999999999998876

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=99.40  E-value=8.1e-11  Score=107.81  Aligned_cols=221  Identities=15%  Similarity=0.089  Sum_probs=142.6

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc------CCEEEEehhhhcccc---ccc-cccc
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY------NILMIADEIQSGLAR---SGR-MLAS  115 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~------gi~li~De~~~g~~~---~g~-~~~~  115 (306)
                      |++.|+++|+   +++.+|.+...++.+|.+.|    +++|.++|+++      |+++++|.+|+|+..   .+. .+.+
T Consensus       175 d~~~L~~~i~---~~t~lV~~t~g~t~tG~idp----i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~  247 (431)
T TIGR01788       175 DPEQVVEAVD---ENTIGVVCILGTTYTGEYED----VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDF  247 (431)
T ss_pred             CHHHHHHHHh---hCCeEEEEEeCCCCCcccCC----HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhc
Confidence            7899999998   46889999999999999999    99999999999      999999999996421   121 1112


Q ss_pred             ccCCCCCcEEEec--ccccCCcccceeeEeCHH--HHhhcCCC---C---c-cCCCCCC--HHHHHHHHHHHHHHhhc--
Q 021893          116 DWEEVRPDMVILG--KALGGGVIPVSAVLADKE--VMLCIQPG---E---H-GSTFGGN--PLASAVAIASLDVIRDE--  180 (306)
Q Consensus       116 ~~~~~~~d~~s~s--K~~~~G~~~~g~~~~~~~--~~~~~~~~---~---~-~~~~~~~--~~~~~aa~~al~~~~~~--  180 (306)
                      .  ....|.+++|  |.+.+.. ++|+++.+++  +...+...   .   . ..+...+  ..........++.+..+  
T Consensus       248 ~--~~~~DSis~s~HK~~~~P~-g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~  324 (431)
T TIGR01788       248 R--LPRVKSINVSGHKYGLVYP-GVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGY  324 (431)
T ss_pred             C--CCCceEEEECchhccCCCC-CcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHH
Confidence            2  2245777776  8765666 8888887654  22322110   0   0 0111111  11223344444444443  


Q ss_pred             -cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE-EeeeEEEEEEecCC-ChhhHHHHHHHHHHCCceec----cC---CC
Q 021893          181 -KLAERSAHLGEELRQHLFKIQQQFPNYVKEVR-GRGLFNAVEFDKTA-LPVSAYDICLKMKERGILAK----PT---HD  250 (306)
Q Consensus       181 -~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~g~~~~i~~~~~~-~~~~~~~~~~~l~~~Gi~~~----~~---~~  250 (306)
                       ++.++..++.+++.++|++..    ......+ ....++.|.+.... ...+..++.+.|.++|+.+.    |.   +.
T Consensus       325 ~~i~~~~~~la~~l~~~L~~~~----~~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~  400 (431)
T TIGR01788       325 RKIMQNSLDVARYLAEEIAKLG----PFEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNAEDI  400 (431)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCC----CEEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCccCCe
Confidence             345666677777777777652    1222221 23445556554311 12456789999999998642    22   23


Q ss_pred             CEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          251 TIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       251 ~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      -.+|++.....+++.++.+++.|++++. .+
T Consensus       401 ~~lR~~~~~~~~~~~~~~~~~~~~~~~~-~~  430 (431)
T TIGR01788       401 VVMRIVVREGFSRDLAELLIEDIEAALA-YL  430 (431)
T ss_pred             EEEEEEecCCCCHHHHHHHHHHHHHHHH-hh
Confidence            4689998778899999999999999887 54

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.40  E-value=7.1e-12  Score=115.13  Aligned_cols=217  Identities=15%  Similarity=0.221  Sum_probs=128.4

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE  119 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~  119 (306)
                      ..++.+|++.++++++   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+|++++.    +.  ......
T Consensus       131 ~~vd~~d~~~l~~ai~---~~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~a~a~----~~--~~~pl~  197 (427)
T PRK05994        131 RWADADDPASFERAIT---PRTKAIFIESIANPGGTVTD----IAAIAEVAHRAGLPLIVDNTLAS----PY--LIRPIE  197 (427)
T ss_pred             EEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCccc----cc--cCCccc
Confidence            4555668999999987   57999999999999999988    99999999999999999999972    11  122234


Q ss_pred             CCCcEE--EecccccC-CcccceeeEe-CHH-----------------------HHhhcC-------C---CCccCCCCC
Q 021893          120 VRPDMV--ILGKALGG-GVIPVSAVLA-DKE-----------------------VMLCIQ-------P---GEHGSTFGG  162 (306)
Q Consensus       120 ~~~d~~--s~sK~~~~-G~~~~g~~~~-~~~-----------------------~~~~~~-------~---~~~~~~~~~  162 (306)
                      +.+|++  |++|.++| |- .+|.+++ ...                       +.+.+.       .   .........
T Consensus       198 ~gaDivv~S~tK~lgg~~~-~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~  276 (427)
T PRK05994        198 HGADIVVHSLTKFLGGHGN-SMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAI  276 (427)
T ss_pred             cCCcEEEEcCccccCCCCC-cEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCC
Confidence            556665  67799984 43 4554433 221                       110000       0   000111223


Q ss_pred             CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----hCCCcee----------eEEEeeeEEEEEEecCCCh
Q 021893          163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVK----------EVRGRGLFNAVEFDKTALP  228 (306)
Q Consensus       163 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~----------~~~~~g~~~~i~~~~~~~~  228 (306)
                      ++..+..+...|+.+..  ..++.+++...+.+.|+....    .+|+...          ...+.|.++.|++...  .
T Consensus       277 ~~~~A~l~~~~l~tL~~--r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~~sf~l~~~--~  352 (427)
T PRK05994        277 SPFNAFLILTGIETLPL--RMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGAGAVFTFGLKGG--Y  352 (427)
T ss_pred             CHHHHHHHHcCcccHHH--HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCceEEEEEEecCC--H
Confidence            44555555555544432  356666777777777765431    1121100          1245688889988631  2


Q ss_pred             hhHHHHHHHHHHCCceec----------cC-----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          229 VSAYDICLKMKERGILAK----------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       229 ~~~~~~~~~l~~~Gi~~~----------~~-----------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .....|++.|.=-.+.++          |.                 .++.||++..+    ||.+.+++.|+++|+
T Consensus       353 ~~~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGl----E~~~dli~dl~~Al~  425 (427)
T PRK05994        353 EAGVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVVRLSIGI----EDVDDIIADLEQALA  425 (427)
T ss_pred             HHHHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcEEEEecc----CCHHHHHHHHHHHHh
Confidence            334455555432111111          11                 24689999543    566777777777775

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.39  E-value=4.2e-12  Score=115.93  Aligned_cols=218  Identities=12%  Similarity=0.133  Sum_probs=134.4

Q ss_pred             cccccCC-CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccccc
Q 021893           39 HLKVDFG-DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW  117 (306)
Q Consensus        39 ~~~~~~~-d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~  117 (306)
                      +.+++.+ |++.++++|+   ++|++|+++.+.|+++.+.+    +++|.++|+++|+++|+|++++      .++.+..
T Consensus       128 v~~vd~~~d~~~l~~~I~---~~Tk~I~~e~pgnP~~~v~D----i~~I~~iA~~~gi~livD~T~~------tP~~~~p  194 (432)
T PRK06702        128 VTFFNPNLTADEIVALAN---DKTKLVYAESLGNPAMNVLN----FKEFSDAAKELEVPFIVDNTLA------TPYLCQA  194 (432)
T ss_pred             EEEECCCCCHHHHHHhCC---cCCeEEEEEcCCCccccccC----HHHHHHHHHHcCCEEEEECCCC------chhhCCh
Confidence            3455554 8999999998   57999999999999998888    9999999999999999999975      2222444


Q ss_pred             CCCCCcEE--EecccccC-Ccccce-eeEeCH----------HHHh---------------------hcC-CCCccCCCC
Q 021893          118 EEVRPDMV--ILGKALGG-GVIPVS-AVLADK----------EVML---------------------CIQ-PGEHGSTFG  161 (306)
Q Consensus       118 ~~~~~d~~--s~sK~~~~-G~~~~g-~~~~~~----------~~~~---------------------~~~-~~~~~~~~~  161 (306)
                      ....+|++  |.+|.++| +. -+| .++.+.          ++.+                     ..+ ........+
T Consensus       195 l~~GADIvv~S~TKy~~Ghsd-~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  273 (432)
T PRK06702        195 FEHGANIIVHSTTKYIDGHAS-SLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNC  273 (432)
T ss_pred             hhcCCCEEEEccccccCCCcc-eeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCC
Confidence            44555554  88898883 22 222 232211          1110                     000 001112335


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----hCCCce---------eeE-EEeeeEEEEEEecCCC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYV---------KEV-RGRGLFNAVEFDKTAL  227 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~---------~~~-~~~g~~~~i~~~~~~~  227 (306)
                      .+++....+..+|+.+..  ..++.+++...+.+.|++...    .+|+..         ... .+.|.++.|.+...  
T Consensus       274 ~sp~~a~l~~rgL~Tl~l--R~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~--  349 (432)
T PRK06702        274 MSPFNAYISNIGLETLHL--RMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGG--  349 (432)
T ss_pred             CCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCC--
Confidence            677777777776765543  355667788888888886431    112111         011 35678889988631  


Q ss_pred             hhhHHHHHHHHHHCCceec----------cC-----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          228 PVSAYDICLKMKERGILAK----------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       228 ~~~~~~~~~~l~~~Gi~~~----------~~-----------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ......|++.|.=-.+.++          |.                 .++.||++..    -|+.+.+++-|++++.
T Consensus       350 ~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvG----lEd~eDLi~Dl~~Al~  423 (432)
T PRK06702        350 LEAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVG----IEDVSDIIADLEAALV  423 (432)
T ss_pred             HHHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHh
Confidence            2334455555532111111          11                 2478999943    3678888999999988

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.39  E-value=5.6e-12  Score=115.67  Aligned_cols=216  Identities=14%  Similarity=0.155  Sum_probs=127.3

Q ss_pred             CCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc
Q 021893           44 FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        44 ~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d  123 (306)
                      ..|+++++++++   +++++|+++.++|++|.+.+    +++|.++|+++|+++|+|++++.    +..  ........|
T Consensus       142 ~~d~e~l~~ai~---~~tklV~ie~~sNp~G~v~D----l~~I~~la~~~gi~liVD~t~a~----~~~--~~pl~~GaD  208 (436)
T PRK07812        142 PDDLDAWRAAVR---PNTKAFFAETISNPQIDVLD----IPGVAEVAHEAGVPLIVDNTIAT----PYL--IRPLEHGAD  208 (436)
T ss_pred             CCCHHHHHHhCC---CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcc----ccc--CCchhcCCC
Confidence            357888888887   57999999999999999999    99999999999999999999862    111  122223455


Q ss_pred             E--EEecccccC-CcccceeeEe-CHHHH-hh-----------------------------cC-CCCccCCCCCCHHHHH
Q 021893          124 M--VILGKALGG-GVIPVSAVLA-DKEVM-LC-----------------------------IQ-PGEHGSTFGGNPLASA  168 (306)
Q Consensus       124 ~--~s~sK~~~~-G~~~~g~~~~-~~~~~-~~-----------------------------~~-~~~~~~~~~~~~~~~~  168 (306)
                      +  .|++|.++| |- -+|.++. +..+. ..                             .+ ..........++..+.
T Consensus       209 ivv~S~tK~lgg~G~-~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~  287 (436)
T PRK07812        209 IVVHSATKYLGGHGT-AIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAF  287 (436)
T ss_pred             EEEEecccccCCCCC-eEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHH
Confidence            5  478899983 33 3444444 32210 00                             00 0001112233444444


Q ss_pred             HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----hCCCce--------e-eE-EEeeeEEEEEEecCCChhhHHHH
Q 021893          169 VAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYV--------K-EV-RGRGLFNAVEFDKTALPVSAYDI  234 (306)
Q Consensus       169 aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~--------~-~~-~~~g~~~~i~~~~~~~~~~~~~~  234 (306)
                      .++..++.+..  ..++..++...+.+.|++...    .+|+..        . .. .+.|.++.|++...  ......|
T Consensus       288 l~~rgl~tL~~--R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~--~~~~~~f  363 (436)
T PRK07812        288 LIAQGLETLSL--RIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGG--VEAGKAF  363 (436)
T ss_pred             HHhcCcCcHHH--HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecCC--HHHHHHH
Confidence            44444444432  255666777777777776431    112110        0 11 35688899998631  2334455


Q ss_pred             HHHHHHCCceec----------cC-----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          235 CLKMKERGILAK----------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       235 ~~~l~~~Gi~~~----------~~-----------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      .+.|.=-...++          |.                 .++.||++..    -|+.+.+++-|+++++ ..+
T Consensus       364 ~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlSvG----lEd~~dli~dl~~Al~-~~~  433 (436)
T PRK07812        364 VNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLAVG----IEGIDDILADLEAGFA-AAK  433 (436)
T ss_pred             HHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHH-hhh
Confidence            555532111111          10                 2578999943    3667778888888887 544

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.38  E-value=2.6e-11  Score=110.07  Aligned_cols=215  Identities=18%  Similarity=0.200  Sum_probs=125.7

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |++.++++++   +++++|+..+   ++|...+    +++|.++|++||+++|+|++|+ |....|..  ...++  .++
T Consensus       110 d~~~l~~~i~---~~tkav~~~~---~~G~~~d----~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~--~g~~g--~~~  175 (379)
T PRK11658        110 TPEAIEAAIT---PRTKAIIPVH---YAGAPAD----LDAIRAIGERYGIPVIEDAAHAVGTYYKGRH--IGARG--TAI  175 (379)
T ss_pred             CHHHHHHhcc---cCCeEEEEeC---CCCCcCC----HHHHHHHHHHcCCeEEEECCCccCCeECCee--cCCCC--CEE
Confidence            7899999987   4678776332   3677777    9999999999999999999998 43333322  22333  367


Q ss_pred             EEec--ccccCCcccceeeEe-CHHHHhhcCCCCc-c-----------------------CCCCCCHHHHHHHHHHHHHH
Q 021893          125 VILG--KALGGGVIPVSAVLA-DKEVMLCIQPGEH-G-----------------------STFGGNPLASAVAIASLDVI  177 (306)
Q Consensus       125 ~s~s--K~~~~G~~~~g~~~~-~~~~~~~~~~~~~-~-----------------------~~~~~~~~~~~aa~~al~~~  177 (306)
                      +||+  |.+.+|  +.|+++. ++++.++++.... +                       ..+..+.+..+.+...++.+
T Consensus       176 ~Sf~~~K~l~~g--~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l  253 (379)
T PRK11658        176 FSFHAIKNITCA--EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKL  253 (379)
T ss_pred             EeCCCCCcCccc--CceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHH
Confidence            7777  666554  5566666 4777765543110 0                       01112223333333333322


Q ss_pred             hhccHHHHHHHHHHHHHHHHHHHHhhCCCcee-eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC--------
Q 021893          178 RDEKLAERSAHLGEELRQHLFKIQQQFPNYVK-EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT--------  248 (306)
Q Consensus       178 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------  248 (306)
                        ++..++.+++.+++++.|+.+......... ........+.+.++....+.+..++.+.|.++||.++..        
T Consensus       254 --~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~  331 (379)
T PRK11658        254 --EALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGISRDALMEALKERGIGTGLHFRAAHTQK  331 (379)
T ss_pred             --HHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccccCCHHHHHHHHHHCCCCCcccCcCcccCh
Confidence              445666667777777777654211000000 001122333444432111245778999999999877621        


Q ss_pred             -----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 -----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 -----------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                       ....+.+-.+...++++++..++.|++++.
T Consensus       332 ~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~~  378 (379)
T PRK11658        332 YYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIAG  378 (379)
T ss_pred             hhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHHh
Confidence                             113444444456889999999999988753

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.38  E-value=1.6e-10  Score=113.09  Aligned_cols=254  Identities=15%  Similarity=0.140  Sum_probs=165.0

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCccc
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVII   77 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~   77 (306)
                      ++++....+-||..-++....+-            .++.++.     -|+++|+++++++++++++|++..+++. |.+.
T Consensus       578 R~~vlip~saHgtnPasa~~~G~------------~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst~-G~~e  644 (939)
T TIGR00461       578 RNICLIPVSAHGTNPASAAMAGM------------QVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPSTH-GVFE  644 (939)
T ss_pred             CCEEEEEccccCcCHHHHHHCCC------------EEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCcC-ceec
Confidence            56788888888876554333321            2233333     2899999999976678999999888874 5443


Q ss_pred             CChhHHHHHHHHHHHcCCEEEEehhhhc-ccccccccccccCCCCCcEEEec--cccc-----CCcccceeeEeCHHHHh
Q 021893           78 PPDGYLKAVRDLCSKYNILMIADEIQSG-LARSGRMLASDWEEVRPDMVILG--KALG-----GGVIPVSAVLADKEVML  149 (306)
Q Consensus        78 ~~~~~l~~i~~l~~~~gi~li~De~~~g-~~~~g~~~~~~~~~~~~d~~s~s--K~~~-----~G~~~~g~~~~~~~~~~  149 (306)
                      ++   +++|+++|+++|.++++|.++.. .    ... ...-.+..|++.++  |+|+     ||. .+|++.+++.+..
T Consensus       645 ~~---I~eI~~iah~~G~~v~VDgAq~~al----~~l-~~Pg~~GaDi~~~s~HKtf~~P~G~GGP-g~G~i~vr~~L~~  715 (939)
T TIGR00461       645 PT---IQHACDIVHSFGGQVYLDGANMNAQ----VGL-TSPGDLGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKSHLIP  715 (939)
T ss_pred             cc---HHHHHHHHHHcCCEEEEEecChhhC----CCC-CCccccCCCEEEecCCccCCCCCCCCCC-CeEEEEEhhhchh
Confidence            22   99999999999999999999962 2    111 12223567888775  9887     788 8999999877554


Q ss_pred             hcCCCC----------------ccCCCCCCHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHHHHHHhhCCCceee
Q 021893          150 CIQPGE----------------HGSTFGGNPLASAVAIASLDVIRDEKL---AERSAHLGEELRQHLFKIQQQFPNYVKE  210 (306)
Q Consensus       150 ~~~~~~----------------~~~~~~~~~~~~~aa~~al~~~~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~~  210 (306)
                      .+-...                .+...+++...+..+...++.+..+++   .+..-.+..++.++|++..    +..+.
T Consensus       716 ~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~~----~~l~~  791 (939)
T TIGR00461       716 FLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDHY----PILFV  791 (939)
T ss_pred             hcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhccC----ccccc
Confidence            432110                011123455556667777777776554   3445567778888887621    12221


Q ss_pred             EEE--eeeEEEEEEecC--CChhhHHHHHHHHHHCCceeccC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          211 VRG--RGLFNAVEFDKT--ALPVSAYDICLKMKERGILAKPT---HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       211 ~~~--~g~~~~i~~~~~--~~~~~~~~~~~~l~~~Gi~~~~~---~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      ...  .-.-+.+.+.+.  ..+....+++++|.+.|+....-   ..+.+.+.|.-..+++|||++++.+.++.+ ++.+
T Consensus       792 ~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~-e~~~  870 (939)
T TIGR00461       792 GTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKE-EINA  870 (939)
T ss_pred             CCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHH-HHHH
Confidence            110  111133333311  12356789999999999875321   234788888788999999999999988877 6654

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.37  E-value=1.5e-11  Score=109.82  Aligned_cols=247  Identities=18%  Similarity=0.167  Sum_probs=151.5

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+||..+..|.|.+..+.....         -+...+.+++..+.+.+++++..  +++++|++|.+.|++-.+++   
T Consensus       102 GD~vl~~~~~YG~t~~~~~~~l~---------~~gi~~~~~d~~~~~~~~~~~~~--~~tk~v~lEtPsNP~l~v~D---  167 (396)
T COG0626         102 GDHVLLPDDLYGGTYRLFEKILQ---------KFGVEVTFVDPGDDEALEAAIKE--PNTKLVFLETPSNPLLEVPD---  167 (396)
T ss_pred             CCEEEecCCccchHHHHHHHHHH---------hcCeEEEEECCCChHHHHHHhcc--cCceEEEEeCCCCccccccc---
Confidence            35677777777555433222211         12233455666677777777763  48999999999999999999   


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--EecccccC-CcccceeeEeC-HHHHhhcCCCCc-
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLAD-KEVMLCIQPGEH-  156 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~g~~~~~-~~~~~~~~~~~~-  156 (306)
                       +++|.++|+++|+++|+|++...      +..++.+.+..|++  |.+|.++| +=.-.|.++++ +++.+.+..... 
T Consensus       168 -I~~i~~~A~~~g~~vvVDNTfat------P~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~  240 (396)
T COG0626         168 -IPAIARLAKAYGALVVVDNTFAT------PVLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRA  240 (396)
T ss_pred             -HHHHHHHHHhcCCEEEEECCccc------ccccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHh
Confidence             99999999999999999999872      22245556667766  77799995 22144546655 455554422111 


Q ss_pred             cCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----hCCCc---------eeeEEEeeeEEEEEEe
Q 021893          157 GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNY---------VKEVRGRGLFNAVEFD  223 (306)
Q Consensus       157 ~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~---------~~~~~~~g~~~~i~~~  223 (306)
                      ......++..+...+..++.+...  .++..++...+.+.|++...    .+|+.         .....+.|.++.|.+.
T Consensus       241 ~~G~~l~p~dA~l~lRGlkTL~~R--m~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~  318 (396)
T COG0626         241 NTGAVLSPFDAWLLLRGLRTLALR--MERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELK  318 (396)
T ss_pred             hcCCCCCHHHHHHHHhccchHHHH--HHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeC
Confidence            123334566666666666665442  45556666666666666321    11100         0122247888999988


Q ss_pred             cCCChhhHHHHHHHHHHCCceec----------c-----------------CCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          224 KTALPVSAYDICLKMKERGILAK----------P-----------------THDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       224 ~~~~~~~~~~~~~~l~~~Gi~~~----------~-----------------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      .   +....+|.+.|.--.+..+          |                 ..++.||++..    -|+++.+++-|+++
T Consensus       319 ~---~~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVG----lEd~eDLi~Dl~~A  391 (396)
T COG0626         319 N---EEAAKKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVG----LEDVEDLIADLEQA  391 (396)
T ss_pred             C---hHHHHHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHH
Confidence            5   2344556555543322222          1                 03689999943    36777788888888


Q ss_pred             Hh
Q 021893          277 LE  278 (306)
Q Consensus       277 l~  278 (306)
                      ++
T Consensus       392 l~  393 (396)
T COG0626         392 LA  393 (396)
T ss_pred             HH
Confidence            76

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.36  E-value=3.1e-11  Score=108.64  Aligned_cols=198  Identities=12%  Similarity=0.053  Sum_probs=133.8

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccc
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPV  138 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~  138 (306)
                      +++++|.+.+..+.+|.+.+         ++++.||+++++|.+++ +  .+..+..+.++  .++.+..|.+| .. ++
T Consensus       137 ~~~~lV~~~h~~t~tG~~~~---------~i~~~~g~~~~VDa~qs-~--g~~~idv~~~~--~~~ss~~K~lG-P~-G~  200 (355)
T cd00611         137 PDAAYVHYCSNETIHGVEFD---------EVPDTGGVPLVADMSSN-I--LSRPIDVSKFG--VIYAGAQKNLG-PA-GV  200 (355)
T ss_pred             CCCCEEEEeCCcccccEEcc---------eecccCCCeEEEEcccc-c--cCCCCCHHHhC--EEEeecccccC-CC-ce
Confidence            57899999999999997632         35556999999999998 1  12233344443  34444669875 44 78


Q ss_pred             eeeEeCHHHHhhcCCCC-----------cc-CCCCCCHHHHHHHHHHHHHHhhc-c---HHHHHHHHHHHHHHHHHHHHh
Q 021893          139 SAVLADKEVMLCIQPGE-----------HG-STFGGNPLASAVAIASLDVIRDE-K---LAERSAHLGEELRQHLFKIQQ  202 (306)
Q Consensus       139 g~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~aa~~al~~~~~~-~---~~~~~~~~~~~l~~~L~~~~~  202 (306)
                      |++++++++++++.+..           .. ..+++|..++.+..++++++.+. +   +.++.+++.+++++.|+++..
T Consensus       201 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~g  280 (355)
T cd00611         201 TVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNG  280 (355)
T ss_pred             EEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCcc
Confidence            89999999887766521           00 12345666778888999988765 3   567778888888888887721


Q ss_pred             hCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          203 QFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       203 ~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      -+. ...... ..+..+.|.++..   ....++...+.++|+.+.++.  .+.+|+++..++|++||+.+++.|+++
T Consensus       281 l~~-~~~~~~~rs~~vvsf~~~~~---~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~  353 (355)
T cd00611         281 FYR-GPVDKRARSRMNVPFRLGKE---ELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEF  353 (355)
T ss_pred             ccc-cCCCHHHcCceEEEEEcCCh---hhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence            110 111111 2234466665531   122455578888999855543  478999999999999999999999875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.34  E-value=2.2e-11  Score=107.66  Aligned_cols=216  Identities=17%  Similarity=0.220  Sum_probs=136.8

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE  119 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~  119 (306)
                      .+++.+|++.++++++   +++.+|++|.+.|+.....+    +++|.++|+++|+++|+|++..+.      +-++.+.
T Consensus       145 ~~vd~~~~~~~~~~i~---~~t~~V~~ESPsNPll~v~D----I~~l~~la~~~g~~vvVDnTf~~p------~~~~pL~  211 (409)
T KOG0053|consen  145 DFVDVDDLKKILKAIK---ENTKAVFLESPSNPLLKVPD----IEKLARLAHKYGFLVVVDNTFGSP------YNQDPLP  211 (409)
T ss_pred             eeechhhHHHHHHhhc---cCceEEEEECCCCCcccccc----HHHHHHHHhhCCCEEEEeCCcCcc------cccChhh
Confidence            4555566777777777   57999999999999999988    999999999999999999998732      2356666


Q ss_pred             CCCcEE--EecccccC--CcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 021893          120 VRPDMV--ILGKALGG--GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELR  194 (306)
Q Consensus       120 ~~~d~~--s~sK~~~~--G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~  194 (306)
                      +.+|++  |.+|.|+|  -+ -.|.++.+ +++.++++.......++.++..+......++.+.-.  .++..++.-.+.
T Consensus       212 lGADIV~hSaTKyi~Ghsdv-i~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglktl~lR--i~~~~ena~~~A  288 (409)
T KOG0053|consen  212 LGADIVVHSATKYIGGHSDV-IGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGLKTLHLR--INKHSENALKIA  288 (409)
T ss_pred             cCCCEEEEeeeeeecCCcce-eeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcchhhhh--HHHHHHHHHHHH
Confidence            677877  67799995  33 45557775 888888776656666777888777766666544321  222233333344


Q ss_pred             HHHHHHH----hhCCCc---------eeeEE-EeeeEEEEEEecCCChhhHHHHHHHHH--HCCceec--------c---
Q 021893          195 QHLFKIQ----QQFPNY---------VKEVR-GRGLFNAVEFDKTALPVSAYDICLKMK--ERGILAK--------P---  247 (306)
Q Consensus       195 ~~L~~~~----~~~~~~---------~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~--~~Gi~~~--------~---  247 (306)
                      +.|++..    ..+|+.         ..... +.|.++.+....   ...+.+|+..|.  .++.-++        |   
T Consensus       289 ~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~---~~~a~kf~~~LK~~~~a~SlG~~eSL~~~p~~m  365 (409)
T KOG0053|consen  289 LLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGN---EEHAKKFYDALKLFTKAPSLGGNESLAEPPAIM  365 (409)
T ss_pred             HHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCC---HHHHHHHHHhhhhhhcccCcCccchhhcchhhh
Confidence            4444431    011100         01222 233333333332   345556665554  2232222        1   


Q ss_pred             -------------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          248 -------------THDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       248 -------------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                   ..++-||+|..    -|+++.+++.|.++++
T Consensus       366 th~~~~e~~~~~Gi~~~LVRvSVG----iEd~~dL~~d~~~Al~  405 (409)
T KOG0053|consen  366 THASELEEREKFGIDPNLVRVSVG----IEDIEDLIKDFQQALE  405 (409)
T ss_pred             ccCCCHHHHHhcCCCCCcEEEEec----cCCHHHHHHHHHHHHH
Confidence                         13689999954    4778888888888887

>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]

Probab=99.33  E-value=8.4e-11  Score=104.22  Aligned_cols=217  Identities=14%  Similarity=0.199  Sum_probs=126.6

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |.+.+++.|+   ++|++|.|..++|+.|...|    +++|.++|+++++.+++|.+|+    .|+ ...+.-++++|+.
T Consensus       170 d~~~~~~~i~---~~T~lv~I~~Vnn~~gv~~P----v~EI~~icr~~~v~v~~DaAQa----vG~-i~vDV~eln~D~~  237 (428)
T KOG1549|consen  170 DISKLREAIR---SKTRLVSIMHVNNEIGVLQP----VKEIVKICREEGVQVHVDAAQA----VGK-IPVDVQELNADFL  237 (428)
T ss_pred             cHHHHHHhcC---CCceEEEEEecccCcccccc----HHHHHHHhCcCCcEEEeehhhh----cCC-ccccHHHcCchhe
Confidence            6889999998   79999999999999999999    9999999999999999999998    333 2245556788888


Q ss_pred             Eec--ccccCCcccceeeEeCHHHHhhcC--CCCcc----C---CCCCCHHHHHHHHHHHHHHhhcc--HHHHHHHHHHH
Q 021893          126 ILG--KALGGGVIPVSAVLADKEVMLCIQ--PGEHG----S---TFGGNPLASAVAIASLDVIRDEK--LAERSAHLGEE  192 (306)
Q Consensus       126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~--~~~~~----~---~~~~~~~~~~aa~~al~~~~~~~--~~~~~~~~~~~  192 (306)
                      +++  |++++-  ++|+++++++ ...++  +...+    .   .-+.+.+.+...-++.+......  ...++.++...
T Consensus       238 s~s~HK~ygp~--~iGaLYvr~~-~~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~~~~~  314 (428)
T KOG1549|consen  238 SISAHKIYGPP--GIGALYVRRK-RPRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKRLSEK  314 (428)
T ss_pred             eeecccccCCC--cceEEEEccC-CCcccccCcccCCccccccccCCcCchhhhhhHHHHHHHHhhcchhHHHHHHHHHH
Confidence            776  988832  2677888762 12222  11000    0   11224445555556666665421  22333333333


Q ss_pred             HHHHHHHHHhhCCCcee---eEEEeeeEEEEEEecCCChhhHHHH------------------HHHHHHCCceeccCCCC
Q 021893          193 LRQHLFKIQQQFPNYVK---EVRGRGLFNAVEFDKTALPVSAYDI------------------CLKMKERGILAKPTHDT  251 (306)
Q Consensus       193 l~~~L~~~~~~~~~~~~---~~~~~g~~~~i~~~~~~~~~~~~~~------------------~~~l~~~Gi~~~~~~~~  251 (306)
                      +...+..   ..++...   ...-...++.+.++.........++                  .-.++..|+..... ..
T Consensus       315 ll~~i~~---~~~~~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~-~~  390 (428)
T KOG1549|consen  315 LLMGIGQ---SLPEVTLNGSGKSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLA-HS  390 (428)
T ss_pred             HHHHHhh---hCchhhccCCcccccccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhh-cc
Confidence            3332222   1111100   0000122222323300000001111                  12222333322222 46


Q ss_pred             EEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          252 IVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       252 ~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      .+||+...+++++|++++.+.+.+..+ .+.
T Consensus       391 ~iRis~G~y~t~~di~~~~~~i~~~v~-~~~  420 (428)
T KOG1549|consen  391 SIRISIGRYTTEEDIDYLVDAIKKLVS-LLR  420 (428)
T ss_pred             eeEEeeeeeCcHHHHHHHHHHHHHHHH-hcc
Confidence            899999999999999999999999887 543

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.32  E-value=2.1e-11  Score=111.97  Aligned_cols=90  Identities=19%  Similarity=0.223  Sum_probs=67.6

Q ss_pred             cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893           39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE  118 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~  118 (306)
                      +.+++.+|+++++++|+   ++|++|+++.+.|++|.+++    +++|.++|+++|+++|+|++|+-    +..  ....
T Consensus       131 v~~vd~~d~~~l~~~i~---~~TklV~~e~~~np~g~v~D----i~~I~~la~~~gi~livD~t~a~----~~~--~~pl  197 (433)
T PRK08134        131 TTFVKPGDIDGWRAAIR---PNTRLLFGETLGNPGLEVLD----IPTVAAIAHEAGVPLLVDSTFTT----PYL--LRPF  197 (433)
T ss_pred             EEEECCCCHHHHHHhcC---CCCeEEEEECCCcccCcccC----HHHHHHHHHHcCCEEEEECCCcc----ccc--CCch
Confidence            35566668999999998   57999999999999999999    99999999999999999999961    111  1112


Q ss_pred             CCCCcEE--EecccccC-CcccceeeE
Q 021893          119 EVRPDMV--ILGKALGG-GVIPVSAVL  142 (306)
Q Consensus       119 ~~~~d~~--s~sK~~~~-G~~~~g~~~  142 (306)
                      .+..|++  |..|.++| |- .+|.++
T Consensus       198 ~~GaD~vv~S~tK~l~g~g~-~~gG~v  223 (433)
T PRK08134        198 EHGADLVYHSATKFLGGHGT-AIGGVL  223 (433)
T ss_pred             hcCCCEEEeccccccCCCCC-ceEEEE
Confidence            3455665  55598883 43 344443

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.32  E-value=1.9e-10  Score=104.47  Aligned_cols=216  Identities=16%  Similarity=0.201  Sum_probs=127.3

Q ss_pred             CCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCC--
Q 021893           45 GDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEV--  120 (306)
Q Consensus        45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~--  120 (306)
                      .|++.+++.+++++ +++++|++.+   .+|...+    +++|.++|++||++||+|++|+ |....+..     .+.  
T Consensus       105 ~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~----~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~-----~g~~~  172 (380)
T TIGR03588       105 IDEDALEKKLAAAKGKLPKAIVPVD---FAGKSVD----MQAIAALAKKHGLKIIEDASHALGAEYGGKP-----VGNCR  172 (380)
T ss_pred             cCHHHHHHHhhcccCCCceEEEEeC---CCCccCC----HHHHHHHHHHcCCEEEEECCCcccCccCCEe-----CCCcc
Confidence            37899999997432 2577777543   3576666    9999999999999999999998 22122221     222  


Q ss_pred             CCcEEEec----ccccCCcccceeeEe-CHHHHhhcCCCCc-------------------------cCCCCCCHHHHHHH
Q 021893          121 RPDMVILG----KALGGGVIPVSAVLA-DKEVMLCIQPGEH-------------------------GSTFGGNPLASAVA  170 (306)
Q Consensus       121 ~~d~~s~s----K~~~~G~~~~g~~~~-~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~aa  170 (306)
                      .-|+.++|    |.++.|  ..|+++. ++++.+.++....                         +..+..+.+..+.+
T Consensus       173 ~~d~~~~S~~~~K~~~~~--~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g  250 (380)
T TIGR03588       173 YADATVFSFHPVKIITTA--EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALG  250 (380)
T ss_pred             ccceEEEecCCCCccccc--CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHH
Confidence            23665444    888744  2333554 5666665432100                         00112233444444


Q ss_pred             HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCcee-eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-
Q 021893          171 IASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVK-EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-  248 (306)
Q Consensus       171 ~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-  248 (306)
                      ...++.+  ++..++.+++.+++.+.|..+....+.... .......+..+.+... ......++.+.|.++||.++.. 
T Consensus       251 ~~qL~~l--~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~r~~l~~~L~~~gI~~~~~~  327 (380)
T TIGR03588       251 LSQLKKL--DRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQE-FGCTRKEVFEALRAAGIGVQVHY  327 (380)
T ss_pred             HHHHHHH--HHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCc-CCCCHHHHHHHHHHCCCCcccCC
Confidence            4445443  345667777778888888765211000000 0011222333334321 1245788999999999887621 


Q ss_pred             ---C---------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          249 ---H---------------------DTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       249 ---~---------------------~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                         .                     ...+++-++...+++|++..++.|++++
T Consensus       328 ~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~  380 (380)
T TIGR03588       328 IPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL  380 (380)
T ss_pred             cccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence               0                     1567777777789999999999998764

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=99.30  E-value=2.3e-10  Score=99.71  Aligned_cols=222  Identities=16%  Similarity=0.193  Sum_probs=131.1

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHH-HHHcCCEEEEehhhh--ccccccc-cc--c----
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDL-CSKYNILMIADEIQS--GLARSGR-ML--A----  114 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l-~~~~gi~li~De~~~--g~~~~g~-~~--~----  114 (306)
                      +|++.+|+++.+. +.++.+.|.|.+++...++.+.|-.+++..+ +.+.|..+++|++|+  .+..... ..  .    
T Consensus       158 PDmD~Ve~LV~~D-~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~  236 (425)
T PF12897_consen  158 PDMDMVEELVAED-PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDA  236 (425)
T ss_dssp             E-HHHHHHHTHTS-TTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHH
T ss_pred             CCHHHHHHHHhcC-CccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHH
Confidence            4899999999765 6799999999765544467799999999999 557999999999998  2211111 00  0    


Q ss_pred             cccCCCCCc----EEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-c-cHHHHHHH
Q 021893          115 SDWEEVRPD----MVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-E-KLAERSAH  188 (306)
Q Consensus       115 ~~~~~~~~d----~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~-~~~~~~~~  188 (306)
                      +...| .||    +.|+||---+|- +++++.++++-++.++......+...+-+.+..-.   +.+.+ + ++.+|+++
T Consensus       237 ~~~AG-npdrv~~F~STSKITf~Ga-Gva~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRHv---rff~d~~gGv~aHM~k  311 (425)
T PF12897_consen  237 CAKAG-NPDRVYVFASTSKITFPGA-GVAFFAASEANLAWIKKHLSVQTIGPDKVNQLRHV---RFFKDAEGGVRAHMRK  311 (425)
T ss_dssp             HHHTT--TTSEEEEEESTTTS-TTS-S-EEEEE-HHHHHHHHHHHHHH-S---HHHHHHHH---HHHHSHHTHHHHHHHH
T ss_pred             HHHcC-CCCeEEEEecccccccCCc-ceeeeecCHHHHHHHHHHhcCceeCccHHHHHHHH---HHhcChhhHHHHHHHH
Confidence            11112 233    458999666776 89999999988877765444444455555554433   33443 4 68888888


Q ss_pred             HHHHHHHHHHHHH----hhCC---Ccee-eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----------CC
Q 021893          189 LGEELRQHLFKIQ----QQFP---NYVK-EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----------HD  250 (306)
Q Consensus       189 ~~~~l~~~L~~~~----~~~~---~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------~~  250 (306)
                      .++.++-+.+...    ..+.   +... ..+..|.+++++..+    ..+..+.+.+.+.||.+.|.          .+
T Consensus       312 Ha~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~----G~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D  387 (425)
T PF12897_consen  312 HAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD----GTAKRVVELAKEAGVALTPAGATFPYGKDPRD  387 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST----T-HHHHHHHHHHTTEE---TTTTSGGG--TTS
T ss_pred             HHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC----ChHHHHHHHHHHhCceeCCCCCCCCCCCCCCC
Confidence            8888876554422    1111   2333 344577778888774    57889999999999999974          25


Q ss_pred             CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          251 TIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       251 ~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      ..||++|+ ..+.+|++.+++.+.-..
T Consensus       388 ~nIRiAPS-~P~leel~~Am~~~~~cv  413 (425)
T PF12897_consen  388 SNIRIAPS-YPSLEELETAMDVFATCV  413 (425)
T ss_dssp             -EEEE--S-SS-HHHHHHHHHHHHHHH
T ss_pred             CcEEecCC-CCCHHHHHHHHHHHHHHH
Confidence            78999986 558899999988885544

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>PLN02880 tyrosine decarboxylase

Probab=99.28  E-value=1.5e-10  Score=107.84  Aligned_cols=227  Identities=12%  Similarity=0.065  Sum_probs=139.4

Q ss_pred             CHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893           46 DITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R  121 (306)
Q Consensus        46 d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~  121 (306)
                      |++.|++.|++.   +..+.+|+.+.....+|.+-|    +++|.++|++||+++++|.+|+|+...-..+.....++ .
T Consensus       222 d~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp----l~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~  297 (490)
T PLN02880        222 APELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP----LLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEE  297 (490)
T ss_pred             CHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc----HHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchh
Confidence            799999999852   334677778778888898888    99999999999999999999987422111111112333 4


Q ss_pred             CcEEEec--ccccCCcccceeeEeCHH--HHhhcCCCC----c-----cCC-----C---CCCHHHHHHHHHHHHHHhhc
Q 021893          122 PDMVILG--KALGGGVIPVSAVLADKE--VMLCIQPGE----H-----GST-----F---GGNPLASAVAIASLDVIRDE  180 (306)
Q Consensus       122 ~d~~s~s--K~~~~G~~~~g~~~~~~~--~~~~~~~~~----~-----~~~-----~---~~~~~~~~aa~~al~~~~~~  180 (306)
                      +|.+++.  |.+...+ .+|+++.+..  +.+.+....    .     ...     +   .+-.........+++.+..+
T Consensus       298 aDSit~d~HKwl~~P~-~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~  376 (490)
T PLN02880        298 ADSFNMNAHKWFLTNF-DCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVE  376 (490)
T ss_pred             cCEEEECchhhcCCCc-cEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHH
Confidence            5766554  9999888 8998887632  222221110    0     000     0   11111233444556666667


Q ss_pred             cHHHHHH---HHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC-----hhhHHHHHHHHHHCC-ceecc---C
Q 021893          181 KLAERSA---HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL-----PVSAYDICLKMKERG-ILAKP---T  248 (306)
Q Consensus       181 ~~~~~~~---~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~-----~~~~~~~~~~l~~~G-i~~~~---~  248 (306)
                      ++.++++   ++.+++.+.|++..    +.....+....++.|.+++...     ......+.+.|.+.| +.+..   .
T Consensus       377 g~~~~i~~~~~lA~~~~~~l~~~~----~~el~~~~~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~  452 (490)
T PLN02880        377 NLQSYIRNHIKLAKEFEQLVAQDS----RFEVVTPRIFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVLS  452 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCC----CEEEecCCceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEEC
Confidence            7777777   77777766665532    1222222233445555553210     111245667777665 44443   2


Q ss_pred             CCCEEEEeCCCCC-CHHHHHHHHHHHHHHHhhhcC
Q 021893          249 HDTIVRLTPPLSI-SSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       249 ~~~~lRi~~~~~~-t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +..++|+++.... +++|++.+++.|.+..+ ++.
T Consensus       453 g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~-~~~  486 (490)
T PLN02880        453 GKYVLRFAVGAPLTEERHVTAAWKVLQDEAS-KLL  486 (490)
T ss_pred             CEEEEEEEecCCCCCHHHHHHHHHHHHHHHH-HHH
Confidence            5678999986555 56999999999998887 653

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.27  E-value=5.4e-11  Score=109.23  Aligned_cols=212  Identities=15%  Similarity=0.191  Sum_probs=123.1

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|++.++++++   +++++|+++.+.|++|.+.+    +++|.++|+++|+++|+|.+++.    |...  ....+..|+
T Consensus       143 ~d~e~l~~~l~---~~tk~V~~e~~~Np~~~v~d----i~~I~~la~~~gi~livD~t~a~----g~~~--~p~~~GaDi  209 (437)
T PRK05613        143 DDPESWQAAVQ---PNTKAFFGETFANPQADVLD----IPAVAEVAHRNQVPLIVDNTIAT----AALV--RPLELGADV  209 (437)
T ss_pred             CCHHHHHHhCC---ccCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCeEEEECCCcc----cccc--ChHHhCCCE
Confidence            47899999988   56889999998888888888    99999999999999999999862    2211  111233465


Q ss_pred             E--EecccccC-Cccccee-eEeCHHHH-hh------c-----C------------------------CCCccCCCCCCH
Q 021893          125 V--ILGKALGG-GVIPVSA-VLADKEVM-LC------I-----Q------------------------PGEHGSTFGGNP  164 (306)
Q Consensus       125 ~--s~sK~~~~-G~~~~g~-~~~~~~~~-~~------~-----~------------------------~~~~~~~~~~~~  164 (306)
                      +  |+.|.++| |- .+|. ++.+.++. ..      .     .                        ..........++
T Consensus       210 vv~S~~K~l~G~gd-~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p  288 (437)
T PRK05613        210 VVASLTKFYTGNGS-GLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSP  288 (437)
T ss_pred             EEeeccceecCCCc-ceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCH
Confidence            5  56699985 44 4444 44333211 00      0     0                        000011223344


Q ss_pred             HHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----hCCCcee---------e-EEEeeeEEEEEEecCCChhh
Q 021893          165 LASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFPNYVK---------E-VRGRGLFNAVEFDKTALPVS  230 (306)
Q Consensus       165 ~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~---------~-~~~~g~~~~i~~~~~~~~~~  230 (306)
                      ..+..+...++.+...  .++..++...+.+.|++...    .+|+...         . ..+.|.++.|++...  ...
T Consensus       289 ~~a~l~~rgl~TL~lR--~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g~gg~~sf~l~~~--~~~  364 (437)
T PRK05613        289 FNAWVTAQGLDTLSLR--LERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKYTGSVLSFDIKGG--KDE  364 (437)
T ss_pred             HHHHHHHcccCcHHHH--HHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCCCceEEEEEecCC--HHH
Confidence            5555455545444332  45666677777777776421    1121110         1 134578889988631  233


Q ss_pred             HHHHHHHHHHCCceec----------cC-----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          231 AYDICLKMKERGILAK----------PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       231 ~~~~~~~l~~~Gi~~~----------~~-----------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ...|++.|.=-.+.++          |.                 .++.||++..    -|+.+.+++.|+++++
T Consensus       365 ~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~~liRlsvG----lE~~~dLi~Dl~~Al~  435 (437)
T PRK05613        365 AWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQATVRLSVG----IEDIDDIIADLEGGFA  435 (437)
T ss_pred             HHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHh
Confidence            4455555532111111          10                 2578999944    3567777888877776

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.25  E-value=3.5e-11  Score=105.47  Aligned_cols=145  Identities=14%  Similarity=0.087  Sum_probs=89.2

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc-ccccccccccccCCCCCc
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG-LARSGRMLASDWEEVRPD  123 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g-~~~~g~~~~~~~~~~~~d  123 (306)
                      .|+++++++++++ +++++++++.+ +++|...+    +++|.++|+++|+++++||+|+. +...+. +.........|
T Consensus       140 i~~~~l~~~l~~~-~~~k~v~l~~p-~~~G~~~d----l~~I~~~~~~~g~~livDeA~~~~~~~~~~-~~~~~~~~~~d  212 (294)
T cd00615         140 IPPETFKKALIEH-PDAKAAVITNP-TYYGICYN----LRKIVEEAHHRGLPVLVDEAHGAHFRFHPI-LPSSAAMAGAD  212 (294)
T ss_pred             CCHHHHHHHHHhC-CCceEEEEECC-CCCCEecC----HHHHHHHHHhcCCeEEEECcchhhhccCcc-cCcchhhcCCc
Confidence            4899999999865 45676666654 46888887    99999999999999999999974 222222 11222223445


Q ss_pred             EE--EecccccCCcccc-eeeEeCHHHH--hhcCCC-CccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHH
Q 021893          124 MV--ILGKALGGGVIPV-SAVLADKEVM--LCIQPG-EHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQ  195 (306)
Q Consensus       124 ~~--s~sK~~~~G~~~~-g~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~  195 (306)
                      ++  |++|.++ |+ +. |++..+.+..  +++... ....+.+++.+.+++...+++.+..  +++.++..++.+.+++
T Consensus       213 iv~~S~hK~l~-g~-~~~~~l~~~~~~~~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~~r~  290 (294)
T cd00615         213 IVVQSTHKTLP-AL-TQGSMIHVKGDLVNPDRVNEALNLHQSTSPSYLILASLDVARAMMALEGKELVEELIELALYARQ  290 (294)
T ss_pred             EEEEchhcccc-hH-hHHHHHHhCCCcCCHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            54  7779884 44 43 3454544311  122111 1223344566667777777777643  3355666666666666


Q ss_pred             HHH
Q 021893          196 HLF  198 (306)
Q Consensus       196 ~L~  198 (306)
                      .++
T Consensus       291 ~l~  293 (294)
T cd00615         291 EIN  293 (294)
T ss_pred             HHh
Confidence            554

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.25  E-value=5.3e-10  Score=99.37  Aligned_cols=212  Identities=19%  Similarity=0.257  Sum_probs=130.9

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |++.+|++|+   ++|++|+..+..   |..++    +++|.++|++||++||.|.+|+ |--+.|.     ..|-.-|+
T Consensus       111 d~~~ie~aIt---~~tKAIipVhl~---G~~~d----m~~i~~la~~~~l~vIEDaAqa~Ga~y~gk-----~vGt~Gd~  175 (374)
T COG0399         111 DPDLIEAAIT---PRTKAIIPVHLA---GQPCD----MDAIMALAKRHGLPVIEDAAQAHGATYKGK-----KVGSFGDI  175 (374)
T ss_pred             CHHHHHHHcc---cCCeEEEEehhc---cCCCC----HHHHHHHHHHcCCeEEEEcchhccCeecCc-----ccccccce
Confidence            8999999999   569999988876   44566    9999999999999999999998 3323333     22333477


Q ss_pred             EEec----ccccCCcccceeeEe-CHHHHhhcCCCC-ccC---------------CCCCCHHHHHHHHHHHHHHhhccHH
Q 021893          125 VILG----KALGGGVIPVSAVLA-DKEVMLCIQPGE-HGS---------------TFGGNPLASAVAIASLDVIRDEKLA  183 (306)
Q Consensus       125 ~s~s----K~~~~G~~~~g~~~~-~~~~~~~~~~~~-~~~---------------~~~~~~~~~~aa~~al~~~~~~~~~  183 (306)
                      .+||    |.++.|=  -|.++. ++++.++++... |+.               .+..+.+.++..+..|+.+  +++.
T Consensus       176 ~~fSF~~~K~ittgE--GGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l--~~~~  251 (374)
T COG0399         176 GAFSFHATKNLTTGE--GGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERL--DEIN  251 (374)
T ss_pred             EEEEecCCCCccccC--ceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHH--HHHH
Confidence            7666    9888431  223665 477776664320 111               1122334444444444433  4456


Q ss_pred             HHHHHHHHHHHHHHHHHHh-hCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCce----eccC----------
Q 021893          184 ERSAHLGEELRQHLFKIQQ-QFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL----AKPT----------  248 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~----~~~~----------  248 (306)
                      ++-+++.+...+.|+.+.. ..|.........-.++.+.+++.  +.+-..+.+.|.++||.    ..|.          
T Consensus       252 ~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~--~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~  329 (374)
T COG0399         252 ERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEE--GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLG  329 (374)
T ss_pred             HHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCC--CCCHHHHHHHHHhCCCCceEEeeccccchhhhccc
Confidence            6666666777777766531 11111111122233334444431  24567899999999654    3331          


Q ss_pred             -------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 -------------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 -------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                   ....+++=+....+.+++++.++.|++++.
T Consensus       330 ~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~  372 (374)
T COG0399         330 YFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLG  372 (374)
T ss_pred             ccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhc
Confidence                         124566655667899999999999998876

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.24  E-value=7.6e-10  Score=102.02  Aligned_cols=213  Identities=15%  Similarity=0.196  Sum_probs=124.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |++.+++.++   +++++|+++++.   |...+    +++|.++|++||++||+|++|+ |--..|..  ...+|   |+
T Consensus       148 d~~~le~~i~---~~tkaVi~~~~~---G~p~d----l~~I~~la~~~gi~vIeDaa~a~G~~~~g~~--~G~~g---d~  212 (438)
T PRK15407        148 DASLLEAAVS---PKTKAIMIAHTL---GNPFD----LAAVKAFCDKHNLWLIEDNCDALGSTYDGRM--TGTFG---DI  212 (438)
T ss_pred             CHHHHHHHcC---cCCeEEEEeCCC---CChhh----HHHHHHHHHHCCCEEEEECccchhhhcCCee--eeccC---ce
Confidence            7899999887   578888888753   43444    9999999999999999999998 32223321  22223   55


Q ss_pred             EEec----ccccCCcccceeeEeC-HHHHhhcCCC---C------------------------------------ccCCC
Q 021893          125 VILG----KALGGGVIPVSAVLAD-KEVMLCIQPG---E------------------------------------HGSTF  160 (306)
Q Consensus       125 ~s~s----K~~~~G~~~~g~~~~~-~~~~~~~~~~---~------------------------------------~~~~~  160 (306)
                      .+||    |.+..|- + |+++.+ +++.+.++..   .                                    .+..+
T Consensus       213 ~~fSf~~~k~~~~ge-G-G~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~  290 (438)
T PRK15407        213 ATLSFYPAHHITMGE-G-GAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNL  290 (438)
T ss_pred             EEEeCCCCCCccccC-c-eEEEECCHHHHHHHHHHHHhCccccccccccccccccccccccccccccccccccccccccc
Confidence            5554    6676553 3 567775 4444332211   0                                    01112


Q ss_pred             CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh--hCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHH
Q 021893          161 GGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ--QFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKM  238 (306)
Q Consensus       161 ~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~--~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l  238 (306)
                      ..+.+.++.++..|+.+  ++..++-+++.+++.+.|.....  ..+............+.+.+.+. ...+..++.+.|
T Consensus       291 rmsel~AAig~~qL~~l--~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~Rd~l~~~L  367 (438)
T PRK15407        291 KITDMQAAIGLAQLEKL--PGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKED-AGFTRVELVKYL  367 (438)
T ss_pred             CccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCc-CCCCHHHHHHHH
Confidence            33455566666666555  33466666777777777765321  11100011112223344444321 123467899999


Q ss_pred             HHCCceeccCC----------------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          239 KERGILAKPTH----------------------------DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       239 ~~~Gi~~~~~~----------------------------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .++||.+++..                            ...+-+=++...+++|++..++.|+++++
T Consensus       368 ~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~  435 (438)
T PRK15407        368 EENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG  435 (438)
T ss_pred             HHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence            99999765210                            01122222344689999999999988765

>PLN03032 serine decarboxylase; Provisional

Probab=99.21  E-value=4.8e-09  Score=94.34  Aligned_cols=205  Identities=14%  Similarity=0.079  Sum_probs=132.8

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcC-----CEEEEehhhhccccc----ccccccc
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN-----ILMIADEIQSGLARS----GRMLASD  116 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~g-----i~li~De~~~g~~~~----g~~~~~~  116 (306)
                      |+++|+++|+++..++.+|+++..++.+|.+.|    +++|.++|++||     +++++|.+++|+-..    ...+.+.
T Consensus       147 d~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp----i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~  222 (374)
T PLN03032        147 DYDDLERALAKNRDKPAILNVNIGTTVKGAVDD----LDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR  222 (374)
T ss_pred             cHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC----HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCC
Confidence            799999999865446888899999999999988    999999999997     589999999863111    0111111


Q ss_pred             cCCCCCcEEEec--ccccCCcccceeeEeCHHHHhhcCCCCc-----cCCCCC--CHHHHHHHHHHHHHHhhccH---HH
Q 021893          117 WEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEH-----GSTFGG--NPLASAVAIASLDVIRDEKL---AE  184 (306)
Q Consensus       117 ~~~~~~d~~s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~~aa~~al~~~~~~~~---~~  184 (306)
                         ...|.+++|  |.++..+ ++|.++.+++.++.+.....     ..+..+  +....+.+..+++.+..+++   .+
T Consensus       223 ---~~vDSis~s~HK~~g~P~-g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~  298 (374)
T PLN03032        223 ---KPIGSVSVSGHKFLGCPM-PCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQ  298 (374)
T ss_pred             ---cCCcEEEECcccccCCCc-CeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHH
Confidence               246777776  8776677 88989998777665532111     112222  33456667777777766554   55


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHH
Q 021893          185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSN  264 (306)
Q Consensus       185 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~  264 (306)
                      +..++.+++.+.|++..     .........+.+.+..+.      ...     +.+|-.+.+. .+.+|++.+..++++
T Consensus       299 ~~~~~a~~l~~~l~~~~-----~~~~~~p~~~~V~f~~~~------~~~-----~~~~w~l~~~-~~~~hi~vm~~~~~~  361 (374)
T PLN03032        299 HCMRNAHYLKDRLTEAG-----LTCRLNELSSTVVFERPM------DEA-----FIKKWQLACE-GDIAHVVVMPNVTVE  361 (374)
T ss_pred             HHHHHHHHHHHHHHhCC-----CcEEECCCceEEEEcCCC------cHh-----Hhheeeeccc-CCEEEEEECCCCCHH
Confidence            56667777777776642     222222233333332221      111     2245555543 458999988888899


Q ss_pred             HHHHHHHHHHH
Q 021893          265 ELQEGSKALHD  275 (306)
Q Consensus       265 ~i~~~~~~l~~  275 (306)
                      .++++++.|++
T Consensus       362 ~id~fi~dl~~  372 (374)
T PLN03032        362 KLDEFVEELVE  372 (374)
T ss_pred             HHHHHHHHHhc
Confidence            99999988764

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.20  E-value=4.2e-09  Score=87.37  Aligned_cols=216  Identities=18%  Similarity=0.260  Sum_probs=135.4

Q ss_pred             HHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEe
Q 021893           48 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVIL  127 (306)
Q Consensus        48 ~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~  127 (306)
                      +.+|+..++-++.+++.++.++.+++|.+.+    -+.+.++|++||++++...+|+    .|.. +.+.-++.+|++.-
T Consensus       144 ~viee~~~~~g~~~~lallTh~Dg~YGNl~D----akkva~ic~e~gvPlllN~AYt----~Grm-pvs~ke~g~DFiVg  214 (382)
T COG1103         144 EVIEEVKDEGGDPPALALLTHVDGEYGNLAD----AKKVAKICREYGVPLLLNCAYT----VGRM-PVSGKEIGADFIVG  214 (382)
T ss_pred             HHHHHHHhccCCCceEEEEeccCCCcCCchh----hHHHHHHHHHcCCceEeeccee----eccc-cccccccCCCEEEe
Confidence            3344444444466999999999999999988    9999999999999999999998    2221 13344567887755


Q ss_pred             c--ccccCCcccceeeEeCHHHHhhc-CCC----------CccCCCCC-CHHHHHHHHHHHHHHhh--ccHHHHHHHHHH
Q 021893          128 G--KALGGGVIPVSAVLADKEVMLCI-QPG----------EHGSTFGG-NPLASAVAIASLDVIRD--EKLAERSAHLGE  191 (306)
Q Consensus       128 s--K~~~~G~~~~g~~~~~~~~~~~~-~~~----------~~~~~~~~-~~~~~~aa~~al~~~~~--~~~~~~~~~~~~  191 (306)
                      |  |+++..- |+|.+..+++..+.. +..          ..+.+..+ +.+.+.|.   +-...+  .+ .+.-.+..+
T Consensus       215 SGHKsmAAs~-PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmAS---fP~V~eRVkr-WdeEv~kaR  289 (382)
T COG1103         215 SGHKSMAASA-PIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMAS---FPHVVERVKR-WDEEVEKAR  289 (382)
T ss_pred             cCccchhccC-CeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHHHHhc---CHHHHHHHHH-HHHHHHHHH
Confidence            5  9998655 899999998876643 321          11112222 22233332   222211  11 233345667


Q ss_pred             HHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-----ChhhHHHHHHHHHHCCce-eccCCCCEEEEeCCCCCCHHH
Q 021893          192 ELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----LPVSAYDICLKMKERGIL-AKPTHDTIVRLTPPLSISSNE  265 (306)
Q Consensus       192 ~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-----~~~~~~~~~~~l~~~Gi~-~~~~~~~~lRi~~~~~~t~~~  265 (306)
                      ++.+.|++++...  ..-..+..--+..|+.+.-.     ......-+.+.|.++||. +.|+-..++.++. +..+.++
T Consensus       290 ~fv~elEkigg~~--qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~~G~Tk~~K~sv-yGl~~Eq  366 (382)
T COG1103         290 WFVAELEKIGGVK--QLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQPGQTKYFKLSV-YGLSWEQ  366 (382)
T ss_pred             HHHHHHHHhhhHH--HhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCccccccCceeEEEEEe-ecCCHHH
Confidence            8888888886221  11111111112233333100     011122368889999887 6677788999985 6789999


Q ss_pred             HHHHHHHHHHHHhhhc
Q 021893          266 LQEGSKALHDVLELDL  281 (306)
Q Consensus       266 i~~~~~~l~~~l~~~~  281 (306)
                      ++..+++++++++ ++
T Consensus       367 ve~V~~afkeI~e-ky  381 (382)
T COG1103         367 VEYVVDAFKEIAE-KY  381 (382)
T ss_pred             HHHHHHHHHHHHH-hc
Confidence            9999999999987 54

>PLN02590 probable tyrosine decarboxylase

Probab=99.20  E-value=7.8e-09  Score=96.85  Aligned_cols=230  Identities=11%  Similarity=0.080  Sum_probs=139.2

Q ss_pred             CHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893           46 DITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R  121 (306)
Q Consensus        46 d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~  121 (306)
                      |++.|+++|++.   +..+.+|+.+.....+|.+=|    |++|.++|++||++|.+|.+|+|+...-..+..-..++ .
T Consensus       270 d~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp----l~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~  345 (539)
T PLN02590        270 PPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP----LVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIEN  345 (539)
T ss_pred             CHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC----HHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCcc
Confidence            799999999752   234677777777888888877    99999999999999999999997532211111111232 3


Q ss_pred             CcEEEec--ccccCCcccceeeEeCHH--HHhhcCCC------C--------ccCCC---CCCHHHHHHHHHHHHHHhhc
Q 021893          122 PDMVILG--KALGGGVIPVSAVLADKE--VMLCIQPG------E--------HGSTF---GGNPLASAVAIASLDVIRDE  180 (306)
Q Consensus       122 ~d~~s~s--K~~~~G~~~~g~~~~~~~--~~~~~~~~------~--------~~~~~---~~~~~~~~aa~~al~~~~~~  180 (306)
                      +|-+++.  |.+...+ .+|.++.+..  +.+.+...      .        ....+   .+-.......+.+++.+..+
T Consensus       346 ADSit~D~HK~l~~p~-~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~  424 (539)
T PLN02590        346 ADSFNMNAHKWLFANQ-TCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSE  424 (539)
T ss_pred             CCEEEECchhhcCcCc-CEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHH
Confidence            4655554  9998888 8888877643  22222110      0        00011   11223455566777777666


Q ss_pred             cHHHHHH---HHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-C----hhhHHHHHHHHHHCCce-eccC---
Q 021893          181 KLAERSA---HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-L----PVSAYDICLKMKERGIL-AKPT---  248 (306)
Q Consensus       181 ~~~~~~~---~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-~----~~~~~~~~~~l~~~Gi~-~~~~---  248 (306)
                      ++.++++   ++.+++.+.|++.    +......+..-..+.|.+.+.. .    ......+.+.+.+.|.. +++.   
T Consensus       425 G~~~~i~~~~~lA~~~~~~l~~~----~~fel~~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~  500 (539)
T PLN02590        425 NLRNFIRDHVNLAKHFEDYVAQD----PSFEVVTTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTALS  500 (539)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEEC
Confidence            5554444   4555555555443    2222222222233334333211 0    12234677777777744 4432   


Q ss_pred             CCCEEEEeC-CCCCCHHHHHHHHHHHHHHHhhhcCCCC
Q 021893          249 HDTIVRLTP-PLSISSNELQEGSKALHDVLELDLPKMR  285 (306)
Q Consensus       249 ~~~~lRi~~-~~~~t~~~i~~~~~~l~~~l~~~~~~~~  285 (306)
                      +..+||+++ +..++++|++.+++.|.+... ++.+++
T Consensus       501 g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~-~~~~~~  537 (539)
T PLN02590        501 GKFVLRFAVGAPLTEEKHVTEAWQIIQKHAS-KFTRND  537 (539)
T ss_pred             CEEEEEEEecCCCCCHHHHHHHHHHHHHHHH-HhcccC
Confidence            456899987 456789999999999999988 887654

>PRK04311 selenocysteine synthase; Provisional

Probab=99.20  E-value=3.7e-09  Score=97.60  Aligned_cols=219  Identities=17%  Similarity=0.186  Sum_probs=134.5

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCC--CC--cccCChhHHHHHHHHHHHcCCEEEEehhhhccc---cc---ccccc
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGE--AG--VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA---RS---GRMLA  114 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~--~G--~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~---~~---g~~~~  114 (306)
                      .++++++++|+   ++|+++++++..|+  .|  ..++    +++|.++|++||+++++|...+-++   ..   +.+..
T Consensus       204 t~~~dle~aI~---~~TklV~~vh~sN~~i~G~~~~~d----l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~  276 (464)
T PRK04311        204 THLRDYEQAIN---ENTALLLKVHTSNYRIEGFTKEVS----LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTV  276 (464)
T ss_pred             CCHHHHHHhcC---ccCeEEEEEcCCCccccccCCcCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCch
Confidence            46889999997   57899998888775  34  4567    9999999999999999999643221   11   11111


Q ss_pred             cccCCCCCcEEEec--ccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccH--------
Q 021893          115 SDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKL--------  182 (306)
Q Consensus       115 ~~~~~~~~d~~s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~--------  182 (306)
                      .+.....+|++++|  |.++|.  ..|++++++++++.++...........-..+++..+++....+  +.+        
T Consensus       277 ~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g~~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~  354 (464)
T PRK04311        277 QELLAAGVDLVTFSGDKLLGGP--QAGIIVGKKELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRL  354 (464)
T ss_pred             hhHHhcCCcEEEecCcccccCC--ceEEEEEcHHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHH
Confidence            12233567888777  988754  5788999999998877533322333334455555555553321  111        


Q ss_pred             ----HHHHHHHHHHHHHHHHHHHhhCCCceeeEE------EeeeE-------EEEEEecCCChhhHHHHHHHHHHC--Cc
Q 021893          183 ----AERSAHLGEELRQHLFKIQQQFPNYVKEVR------GRGLF-------NAVEFDKTALPVSAYDICLKMKER--GI  243 (306)
Q Consensus       183 ----~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~------~~g~~-------~~i~~~~~~~~~~~~~~~~~l~~~--Gi  243 (306)
                          .++..++...+.+.|+.....  +....+.      +.|.+       +.+.+...  .....++.+.|++-  .|
T Consensus       355 l~~~~~~~~~~A~~la~~L~~~~~~--~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~--~~~~~~l~~~lr~~~~~i  430 (464)
T PRK04311        355 LTRSPEELRARAERLAAALKAALGA--AFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPK--DRSLEALAARLRLLPPPV  430 (464)
T ss_pred             hcCCHHHHHHHHHHHHHHHHhccCC--CeeEEEEEccCccCCCCCcCCCCCeEEEEEeCC--CCCHHHHHHHHhcCCCCE
Confidence                255556667777777664311  0111111      12222       22333321  24567888888875  46


Q ss_pred             eeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          244 LAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       244 ~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +.+. ..+.+.+-+- ...++|++.++++|++++.
T Consensus       431 ~~r~-~~~~~~ld~r-~~~~~~~~~~~~~~~~~~~  463 (464)
T PRK04311        431 IGRI-EDGRLLLDLR-TLEEEDEERLAAALLEALN  463 (464)
T ss_pred             EEEE-ECCEEEEEeC-cCCHHHHHHHHHHHHHHhh
Confidence            6653 3667778763 5578899999999988764

>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]

Probab=99.19  E-value=1.9e-09  Score=90.85  Aligned_cols=262  Identities=15%  Similarity=0.114  Sum_probs=165.2

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCC-----CHHHHHHHHHhcCCcEEEEEEccccCCCCcc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEPIQGEAGVI   76 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~   76 (306)
                      |-||+.-+++|..+.++.-+.--    .++..|...-+.+-|..     ..+++-..|+.+++.+++|+.+.++..+|..
T Consensus       155 R~KILlE~kaFPSDhYAiesQ~~----lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~  230 (465)
T KOG3846|consen  155 RFKILLEKKAFPSDHYAIESQCK----LHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQY  230 (465)
T ss_pred             hhhhhhccCCCCchHHHHHhhhh----hcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccc
Confidence            34777778888777766544322    11111111111111111     3566677888888999999999999999999


Q ss_pred             cCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCC--
Q 021893           77 IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG--  154 (306)
Q Consensus        77 ~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~--  154 (306)
                      .+    +.+|...-+..|+++-+|-+|+ +  ...++....|+++.-+.|..|.+..|-..+|.+...++..+..++.  
T Consensus       231 Fd----i~aIT~Agq~kgc~VGfDLAHA-v--gNVpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~  303 (465)
T KOG3846|consen  231 FD----IGAITFAGQFKGCLVGFDLAHA-V--GNVPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLA  303 (465)
T ss_pred             cc----hhhhhhcccCCCcEechhhhhh-h--cCCceEEeecCCceEEEeeecccccCCCccceeeeehhhhcchhhHHh
Confidence            99    9999988899999999999997 2  1133445566665556677798874333556555555443332221  


Q ss_pred             ----------------------CccCCCCC-CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCc----
Q 021893          155 ----------------------EHGSTFGG-NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNY----  207 (306)
Q Consensus       155 ----------------------~~~~~~~~-~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~----  207 (306)
                                            ..+...+. +.+..++...+++....-. .+.++++.-.+..-|+.+....-+.    
T Consensus       304 GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~-~~~lRkrS~lLTgYleyL~k~~~g~~~~~  382 (465)
T KOG3846|consen  304 GWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFN-INELRKRSLLLTGYLEYLLKASKGYKHPL  382 (465)
T ss_pred             hhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhh-HHHHhhhhhhHHhHHHHHHHHhcccCchh
Confidence                                  11111122 3345566667777765522 3444444444444444433111000    


Q ss_pred             -----------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeC-CCCCCHHHHHHHHHHHHH
Q 021893          208 -----------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTP-PLSISSNELQEGSKALHD  275 (306)
Q Consensus       208 -----------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~-~~~~t~~~i~~~~~~l~~  275 (306)
                                 .......|.-+.+.+..     ....+.+.|.++|+++....++.||++| +++++-.|+..++..|.+
T Consensus       383 rt~Kl~~~IiTP~~~~erGcQLsl~Fss-----p~~~vfqeL~krGv~~DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e  457 (465)
T KOG3846|consen  383 RTEKLFFTIITPTSTDERGCQLSLYFSS-----PTPKVFQELHKRGVIGDKRRPNVIRVAPVPLYNTFSDVYIFVNALNE  457 (465)
T ss_pred             hhcceeEEEeCCcccccccceEEEEeCC-----CchHHHHHHHHcCeeccccCCCceEeecchhhccHHHHHHHHHHHHH
Confidence                       01223345555555553     2357899999999999999999999999 789999999999999999


Q ss_pred             HHhhhc
Q 021893          276 VLELDL  281 (306)
Q Consensus       276 ~l~~~~  281 (306)
                      ++. .+
T Consensus       458 ~~d-~~  462 (465)
T KOG3846|consen  458 AMD-KL  462 (465)
T ss_pred             HHH-Hh
Confidence            887 54

>PLN02271 serine hydroxymethyltransferase

Probab=99.18  E-value=6.5e-09  Score=96.16  Aligned_cols=214  Identities=14%  Similarity=0.085  Sum_probs=133.1

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |.+++++....  .++++|++....++  ...+    +++++++|+++|++|++|.+|. |+...|. +..+..  ..|+
T Consensus       286 Dyd~lek~a~~--~rPKLII~g~Sayp--r~~D----~~~i~eIAdevGA~LmvD~AH~aGLIa~g~-~~sP~~--~aDv  354 (586)
T PLN02271        286 DYDKLEEKALD--FRPKILICGGSSYP--REWD----YARFRQIADKCGAVLMCDMAHISGLVAAKE-CVNPFD--YCDI  354 (586)
T ss_pred             CHHHHHHHhhh--cCCeEEEECchhcc--CcCC----HHHHHHHHHHcCCEEEEECcccccccccCc-CCCCCc--CCcE
Confidence            78999986554  57999999776555  3566    9999999999999999999998 6533332 211222  3577


Q ss_pred             EEec--ccccCCcccceeeEeCHH--------------------HHhhcCCCCccCCCCC-CHHHHHHHHHHHHHHhh--
Q 021893          125 VILG--KALGGGVIPVSAVLADKE--------------------VMLCIQPGEHGSTFGG-NPLASAVAIASLDVIRD--  179 (306)
Q Consensus       125 ~s~s--K~~~~G~~~~g~~~~~~~--------------------~~~~~~~~~~~~~~~~-~~~~~~aa~~al~~~~~--  179 (306)
                      ++++  |++.|.. + |++..+++                    +.+++.....-....+ ..-.+++...+++.+..  
T Consensus       355 vt~TTHKtLrGPr-G-G~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~e  432 (586)
T PLN02271        355 VTSTTHKSLRGPR-G-GIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPE  432 (586)
T ss_pred             EEeCCcccCCCCC-c-eEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChH
Confidence            7554  9997654 3 66776654                    2222322111111111 11234444566666544  


Q ss_pred             -ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc----C-----C
Q 021893          180 -EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP----T-----H  249 (306)
Q Consensus       180 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~-----~  249 (306)
                       .++.+++.++.+.|.+.|.+.+..   .+ .-.-...++++++.+  .+.......+.|-+-||.+-.    +     .
T Consensus       433 fk~Ya~QVv~NAkaLA~~L~~~G~~---vv-~ggTdnHlvLvDl~~--~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~  506 (586)
T PLN02271        433 YKAYMQQVKKNAQALASALLRRKCR---LV-TGGTDNHLLLWDLTT--LGLTGKNYEKVCEMCHITLNKTAIFGDNGTIS  506 (586)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCe---Ee-eCCCCcceeeecCcc--cCCCHHHHHHHHHHcCeEeccccCCCCCCCCC
Confidence             346778888888888888876422   11 111245566777654  233555666666667888752    2     2


Q ss_pred             CCEEEEeCCC----CCCHHHHHHHHHHHHHHHh
Q 021893          250 DTIVRLTPPL----SISSNELQEGSKALHDVLE  278 (306)
Q Consensus       250 ~~~lRi~~~~----~~t~~~i~~~~~~l~~~l~  278 (306)
                      ++.||+..+.    ...++|+++..+.|.++++
T Consensus       507 psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~  539 (586)
T PLN02271        507 PGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ  539 (586)
T ss_pred             CCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence            4568988653    3556888888888888876

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.14  E-value=1.1e-08  Score=94.24  Aligned_cols=214  Identities=19%  Similarity=0.188  Sum_probs=127.5

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCC--C--cccCChhHHHHHHHHHHHcCCEEEEehhhhccccc------ccccc
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEA--G--VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS------GRMLA  114 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~--G--~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~------g~~~~  114 (306)
                      .|+++++++|+   ++|+++++++..|.+  |  ..++    +++|.++|++||+++++|.+.+-++..      ..+..
T Consensus       199 ~~l~dle~aI~---~~T~lv~~~h~sN~~~~G~~~~~d----l~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~  271 (454)
T TIGR00474       199 THLKDYEDAIT---ENTALLLKVHTSNYRIVGFTEEVS----IAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTV  271 (454)
T ss_pred             CCHHHHHHhcC---cCCEEEEEEccCcccccCCCCCCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCccc
Confidence            46889999887   579999988887653  5  4677    999999999999999999753212111      11111


Q ss_pred             cccCCCCCcEEEec--ccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-c-cH--------
Q 021893          115 SDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-E-KL--------  182 (306)
Q Consensus       115 ~~~~~~~~d~~s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~-~~--------  182 (306)
                      .+.....+|++++|  |.++|.  ..|+++++++.++.++...........-+.+++..+++....+ + .+        
T Consensus       272 ~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~  349 (454)
T TIGR00474       272 QEVIAAGVDLVTFSGDKLLGGP--QAGIIVGKKELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRM  349 (454)
T ss_pred             ccHhHcCCCEEEecCccccCCC--eEEEEEECHHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHH
Confidence            22334567899888  998654  4688999999888776532222222223334444444444322 1 01        


Q ss_pred             ----HHHHHHHHHHHHHHHHHHHhhCCCceeeEE------EeeeE-------EEEEEecCCChhhHHHHHHHHHHCC--c
Q 021893          183 ----AERSAHLGEELRQHLFKIQQQFPNYVKEVR------GRGLF-------NAVEFDKTALPVSAYDICLKMKERG--I  243 (306)
Q Consensus       183 ----~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~------~~g~~-------~~i~~~~~~~~~~~~~~~~~l~~~G--i  243 (306)
                          .++..++...+.+.|+.....  +....+.      +.|.+       +.+.+..  ......++.+.|++..  |
T Consensus       350 l~~~~~~~~~~A~~la~~L~~~~~~--~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~--~~~~~~~l~~~lr~~~~~i  425 (454)
T TIGR00474       350 LTQSPEELRARAERLAKRLKAALGP--GFELEIVPGLSQVGGGSLPDERLPSYAVTLTP--DGLSAEKLEARLRELPPPI  425 (454)
T ss_pred             hccCHHHHHHHHHHHHHHHHhhccC--CceEEEEEcCCcccCCCCcCCCCCeEEEEEec--CCCCHHHHHHHHhcCCCCE
Confidence                235556677777777664211  1111111      12222       2233332  1345678888888765  5


Q ss_pred             eeccCCCCEEEEeCCCCCCHHHHHHHHHHH
Q 021893          244 LAKPTHDTIVRLTPPLSISSNELQEGSKAL  273 (306)
Q Consensus       244 ~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l  273 (306)
                      +.+. ..+.+.+-+- ...++|++.++++|
T Consensus       426 i~r~-~~~~~~ld~r-~~~~~~~~~~~~~~  453 (454)
T TIGR00474       426 IGRI-EDDRFLLDLR-TLLEDEEELLIEAL  453 (454)
T ss_pred             EEEE-ECCEEEEEeC-cCCHHHHHHHHHHh
Confidence            5543 3667777763 45677888877765

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.13  E-value=7.5e-09  Score=94.07  Aligned_cols=234  Identities=15%  Similarity=0.106  Sum_probs=141.4

Q ss_pred             CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c---cc------ccccccc
Q 021893           46 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G---LA------RSGRMLA  114 (306)
Q Consensus        46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g---~~------~~g~~~~  114 (306)
                      |++.||++|++++ ++++++.++...+..|..+.+.+.+++|.++|++||+.||.|.++. |   |.      +.+....
T Consensus       162 D~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~  241 (460)
T PRK13237        162 DLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIK  241 (460)
T ss_pred             CHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHh
Confidence            8999999998642 4555666555555554456677789999999999999999999997 3   21      1111110


Q ss_pred             --cccCCCCCcEEEe--cccccCCcccceeeEe-CHHHHhhcCCCC----ccCCCCCC-HHHHHHHHHHHHHHhhccHHH
Q 021893          115 --SDWEEVRPDMVIL--GKALGGGVIPVSAVLA-DKEVMLCIQPGE----HGSTFGGN-PLASAVAIASLDVIRDEKLAE  184 (306)
Q Consensus       115 --~~~~~~~~d~~s~--sK~~~~G~~~~g~~~~-~~~~~~~~~~~~----~~~~~~~~-~~~~~aa~~al~~~~~~~~~~  184 (306)
                        .....-..|.+++  .|.++.+.  -|+++. +++++++++...    ...+|.+- .--+.+...+++...+.++..
T Consensus       242 ei~~e~~s~aD~~t~S~~K~~~~~~--GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~~y~~  319 (460)
T PRK13237        242 EIVHEMFSYADGCTMSGKKDCLVNI--GGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQYEYIE  319 (460)
T ss_pred             HHhhhccCcCcEEEEeCCCCCCCCC--ceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhchHHHHH
Confidence              0001113466644  47766221  133555 578888777542    12233321 112333333455554556777


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec----CC-ChhhHHHHHHHHHHC-Cceecc----------C
Q 021893          185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK----TA-LPVSAYDICLKMKER-GILAKP----------T  248 (306)
Q Consensus       185 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~----~~-~~~~~~~~~~~l~~~-Gi~~~~----------~  248 (306)
                      +..+..++|.+.|++.+     .....+..|+-+.++...    .+ ....+..++..|..+ ||-...          .
T Consensus       320 ~ri~~~~~l~~~L~~~G-----vpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~  394 (460)
T PRK13237        320 HRVGQVRYLGEKLLAAG-----VPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPK  394 (460)
T ss_pred             HHHHHHHHHHHHHHHCC-----CceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCC
Confidence            77778888988888874     333445566666665332    11 122466787777655 554321          0


Q ss_pred             -------CCCEEEEeCCC-CCCHHHHHHHHHHHHHHHhhhcCCCCCC
Q 021893          249 -------HDTIVRLTPPL-SISSNELQEGSKALHDVLELDLPKMRKP  287 (306)
Q Consensus       249 -------~~~~lRi~~~~-~~t~~~i~~~~~~l~~~l~~~~~~~~~~  287 (306)
                             .-..+|+.+|- .-|.+.++...++|....+ .-..+++-
T Consensus       395 ~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~-~~~~~~g~  440 (460)
T PRK13237        395 TGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYK-HREDIRGL  440 (460)
T ss_pred             CCccCCCccceeeeccccccccHHHHHHHHHHHHHHHH-hHhhcCCe
Confidence                   12679998863 4588999999999998888 55554443

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.12  E-value=9.5e-09  Score=92.82  Aligned_cols=209  Identities=21%  Similarity=0.281  Sum_probs=119.8

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |++.++++|+   +++++|++.+..+.   ..+    +++|.++|+++|++||.|.+|+ |--..|..  .   |-.-|+
T Consensus       102 d~~~~~~~i~---~~t~ai~~~h~~G~---~~d----~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~--~---G~~gd~  166 (363)
T PF01041_consen  102 DPEALEKAIT---PKTKAILVVHLFGN---PAD----MDAIRAIARKHGIPLIEDAAQAFGARYKGRP--V---GSFGDI  166 (363)
T ss_dssp             -HHHHHHHHH---TTEEEEEEE-GGGB----------HHHHHHHHHHTT-EEEEE-TTTTT-EETTEE--T---TSSSSE
T ss_pred             CHHHHHHHhc---cCccEEEEecCCCC---ccc----HHHHHHHHHHcCCcEEEccccccCceeCCEe--c---cCCCCc
Confidence            8999999999   57899999888743   445    9999999999999999999998 22122221  2   222376


Q ss_pred             EEec----ccccCCcccceeeEeC-HHHHhhcCCC---C--------------ccCCCCCCHHHHHHHHHHHHHHhhccH
Q 021893          125 VILG----KALGGGVIPVSAVLAD-KEVMLCIQPG---E--------------HGSTFGGNPLASAVAIASLDVIRDEKL  182 (306)
Q Consensus       125 ~s~s----K~~~~G~~~~g~~~~~-~~~~~~~~~~---~--------------~~~~~~~~~~~~~aa~~al~~~~~~~~  182 (306)
                      .+||    |.+..|-  .|+++.+ +++.+.++..   .              .+..+..+.+..+.+...|+.+  ++.
T Consensus       167 ~~fSf~~~K~i~~ge--GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L--~~~  242 (363)
T PF01041_consen  167 AIFSFHPTKIITTGE--GGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRL--DEI  242 (363)
T ss_dssp             EEEESSTTSSS-SSS---EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTH--HHH
T ss_pred             eEecCCCCCCCcCCC--CeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHh--hhh
Confidence            6665    8887443  3447765 5555544321   1              1122334556666666666544  334


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhC-CCceee-EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----------
Q 021893          183 AERSAHLGEELRQHLFKIQQQF-PNYVKE-VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----------  249 (306)
Q Consensus       183 ~~~~~~~~~~l~~~L~~~~~~~-~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----------  249 (306)
                      .++-+++.+.+.+.|....... +..... .......+.+.+++... ....++.+.|.++||.+.+..           
T Consensus       243 ~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~-~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~  321 (363)
T PF01041_consen  243 IARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEAL-ADRDELVEALRARGIETRPHYPKPLHRQPVYR  321 (363)
T ss_dssp             HHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGC-STHHHHHHHHHHTTBEEBCSTSSCGGGSGGGT
T ss_pred             HHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccccc-chHHHHHHHHHHCCCcccccccCchhhhHHHH
Confidence            5555566666666666653110 000001 11233344555553211 357789999999999988632           


Q ss_pred             -----------------CCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893          250 -----------------DTIVRLTPPLSISSNELQEGSKALH  274 (306)
Q Consensus       250 -----------------~~~lRi~~~~~~t~~~i~~~~~~l~  274 (306)
                                       ...|.+-.+...++++++..++.|+
T Consensus       322 ~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir  363 (363)
T PF01041_consen  322 SYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR  363 (363)
T ss_dssp             TGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred             hcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence                             1334444445678888988888774

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.10  E-value=9.8e-10  Score=99.30  Aligned_cols=214  Identities=16%  Similarity=0.225  Sum_probs=124.8

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE  119 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~  119 (306)
                      .+++.++.+.++  ++  ++++++|+++.+.|+++.+++    +++|.++|++++  +++|.+++.      .+.....+
T Consensus       132 ~fvd~~~~~~~~--l~--~~~tklv~~e~~snpt~~v~D----i~~I~~la~~~~--lvVD~t~~s------~~~~~pl~  195 (384)
T PRK06434        132 DYIDTDRLNSLD--FD--PSNYDLIYAESITNPTLKVPD----IKNVSSFCHEND--VIVDATFAS------PYNQNPLD  195 (384)
T ss_pred             EEECCCChhhee--ec--CCCeeEEEEEcCCCCCceeec----HHHHHHHHHHcC--eEEECCCCC------cccCCchh
Confidence            444444444443  33  247999999999999988888    999999999999  466999741      11122334


Q ss_pred             CCCcEE--EecccccC-CcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893          120 VRPDMV--ILGKALGG-GVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ  195 (306)
Q Consensus       120 ~~~d~~--s~sK~~~~-G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~  195 (306)
                      ...|++  |..|.++| |-.-.|.++. ++++.+.++..........+++.++.+...++.+..  ..++.+++...+.+
T Consensus       196 ~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~tL~~--R~~r~~~~a~~~a~  273 (384)
T PRK06434        196 LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLKTLGL--RMEKHNKNGMELAR  273 (384)
T ss_pred             cCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCcHHH--HHHHHHHHHHHHHH
Confidence            556766  44599975 3103555655 456666554322222334456655555555554432  35666677777777


Q ss_pred             HHHHHHh----hCCCce---eeEEEeeeEEEEEEecCCChhhHHHHHHHHHH--CCceec--------cC----------
Q 021893          196 HLFKIQQ----QFPNYV---KEVRGRGLFNAVEFDKTALPVSAYDICLKMKE--RGILAK--------PT----------  248 (306)
Q Consensus       196 ~L~~~~~----~~~~~~---~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~--~Gi~~~--------~~----------  248 (306)
                      .|+....    .+|+..   ....+.|.++.|++..   ......|.+.|.=  .++-.+        |.          
T Consensus       274 ~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~---~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~e  350 (384)
T PRK06434        274 FLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS---MEDVHKFIRNLEIPMVAASLGGVESLITLPVETSHSSLSPE  350 (384)
T ss_pred             HHHcCCCccEEECCChHHHHHhcCCCCceEEEEECC---HHHHHHHHHhCCcceEccCCCCCCeeeECCCccccccCCHH
Confidence            7775421    111110   1123578889998863   2344455555531  121111        10          


Q ss_pred             -------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 -------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 -------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                             .++.||+++.    -||.+.+++.|+++|.
T Consensus       351 ~~~~~gi~~~liRlsvG----lEd~~dLi~dl~~Al~  383 (384)
T PRK06434        351 ERERLGISDNLVRFSIG----IEDIDDLIKDIENALS  383 (384)
T ss_pred             HHHhcCCCcCeEEEEeC----cCCHHHHHHHHHHHhc
Confidence                   2578999943    3567778888877775

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=99.09  E-value=2.2e-08  Score=93.92  Aligned_cols=217  Identities=17%  Similarity=0.127  Sum_probs=125.2

Q ss_pred             CHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893           46 DITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R  121 (306)
Q Consensus        46 d~~~le~~i~~---~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~  121 (306)
                      |++.|++.|++   .+.++.+|+.....+.+|.+.|    +++|.++|+++|+++++|.+|+|....-..+.....++ .
T Consensus       248 d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDp----l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~  323 (522)
T TIGR03799       248 DVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDP----LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIER  323 (522)
T ss_pred             CHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCC----HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchh
Confidence            79999999974   2222333344455667898988    99999999999999999999986311111010112333 5


Q ss_pred             CcEEEec--ccccCCcccceeeEeC-HHHHhhcCCCCc------c-----CCC--CCCHHHHHHHHHHHHHHhhcc---H
Q 021893          122 PDMVILG--KALGGGVIPVSAVLAD-KEVMLCIQPGEH------G-----STF--GGNPLASAVAIASLDVIRDEK---L  182 (306)
Q Consensus       122 ~d~~s~s--K~~~~G~~~~g~~~~~-~~~~~~~~~~~~------~-----~~~--~~~~~~~~aa~~al~~~~~~~---~  182 (306)
                      .|.++++  |.+.+.+ .+|+++.+ +...+.+.....      .     .++  +.+..+ .....+++.+..++   +
T Consensus       324 aDSit~d~HK~l~~P~-g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~lG~~G~~~i  401 (522)
T TIGR03799       324 ADSVTIDAHKQLYVPM-GAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHIIGRKGYELL  401 (522)
T ss_pred             CCEEEEChhhcCCcCc-ccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHH-HHHHHHHHHHhHHHHHHH
Confidence            7888777  9888888 88988775 555555443100      0     011  112222 34667788776644   4


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-------------------ChhhHHHHHHHHHHCCc
Q 021893          183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-------------------LPVSAYDICLKMKERGI  243 (306)
Q Consensus       183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-------------------~~~~~~~~~~~l~~~Gi  243 (306)
                      .++..++.+++.+.|++..    +.....+..-..+.|.+.+..                   .+.-...+.+.+.+.|.
T Consensus       402 i~~~~~la~~l~~~L~~~~----~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~  477 (522)
T TIGR03799       402 IDQSIEKAKYFADLIQQQP----DFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGK  477 (522)
T ss_pred             HHHHHHHHHHHHHHHhhCC----CeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCC
Confidence            5566666666666666542    222222222223344433211                   00112356677777775


Q ss_pred             eecc-C----------CCCEEEEeC-CCCCCHHHHHHHHHH
Q 021893          244 LAKP-T----------HDTIVRLTP-PLSISSNELQEGSKA  272 (306)
Q Consensus       244 ~~~~-~----------~~~~lRi~~-~~~~t~~~i~~~~~~  272 (306)
                      .... .          +.-.+|+++ +..++.++++.+++.
T Consensus       478 ~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~  518 (522)
T TIGR03799       478 SFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE  518 (522)
T ss_pred             EEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence            4332 1          124699987 455678888877653

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>PRK15029 arginine decarboxylase; Provisional

Probab=99.07  E-value=1.3e-08  Score=98.20  Aligned_cols=267  Identities=14%  Similarity=0.057  Sum_probs=153.0

Q ss_pred             EEEEecCCCCcccchhcccCC-ccccccCCC--CCCCcccccCCCHHHHHHHHHhcCCcE--------EEEEEccccCCC
Q 021893            5 IVSCCGCFHGRTLAAISMSCD-NEAIRGFGP--LLPGHLKVDFGDITALEKIFKESGDQI--------AGFLFEPIQGEA   73 (306)
Q Consensus         5 ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~d~~~le~~i~~~~~~~--------~~v~v~~~~~~~   73 (306)
                      +|.+..+-|=..+.++.+++- +.+..+...  ...+.+...+-+++.++++|+++++..        ++++++|.+  .
T Consensus       247 ~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY--~  324 (755)
T PRK15029        247 VVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY--D  324 (755)
T ss_pred             EEEeecccHHHHHHHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC--c
Confidence            445666666666666666662 222211100  001111111225899999999875433        455555543  5


Q ss_pred             CcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccC-----C-CCCc-EEEec--ccccCCcccceeeEe
Q 021893           74 GVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWE-----E-VRPD-MVILG--KALGGGVIPVSAVLA  143 (306)
Q Consensus        74 G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~-----~-~~~d-~~s~s--K~~~~G~~~~g~~~~  143 (306)
                      |...+    +++|.++|++++++|++||+|++.......++. ...     . ..+| +++-|  |.+++-- ..+++..
T Consensus       325 Gv~~d----i~~I~~~~h~~~~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alT-QaS~LHv  399 (755)
T PRK15029        325 GVCYN----AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALS-QASYIHV  399 (755)
T ss_pred             ceeeC----HHHHHHHHHhcCCeEEEECccccccccCccccccccccccccccCCCceEEEEchhhcccchh-hhhhhee
Confidence            77777    999999999999999999999853223333321 211     1 4577 66555  8886422 4445665


Q ss_pred             CHH--HH--hhcCCC-CccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhC---CCce----
Q 021893          144 DKE--VM--LCIQPG-EHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQF---PNYV----  208 (306)
Q Consensus       144 ~~~--~~--~~~~~~-~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~---~~~~----  208 (306)
                      +..  .+  +++... ....+.+++.+-+++...+.+++..   +++.++..+....+|+.++++...+   ..+.    
T Consensus       400 ~~~~~~id~~r~~~~l~~~qSTSPSY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~  479 (755)
T PRK15029        400 REGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPW  479 (755)
T ss_pred             CCCccccCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcccccccccccccccc
Confidence            332  11  122221 1233444556666666677776653   2356667777777888887654210   0000    


Q ss_pred             -----------------------------eeEEEe-----e-------------eEEEEEEecCC-------ChhhHHHH
Q 021893          209 -----------------------------KEVRGR-----G-------------LFNAVEFDKTA-------LPVSAYDI  234 (306)
Q Consensus       209 -----------------------------~~~~~~-----g-------------~~~~i~~~~~~-------~~~~~~~~  234 (306)
                                                   ..+...     |             .=+.+..+..+       .+..+..+
T Consensus       480 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l  559 (755)
T PRK15029        480 NKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALV  559 (755)
T ss_pred             CccccccccccccccccccchhhhccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHH
Confidence                                         010000     0             00122221110       11123378


Q ss_pred             HHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          235 CLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       235 ~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .+.|.++||.+.-.+...+-+.++...+++++++++++|.++-+
T Consensus       560 ~~~L~~~gI~~E~~~~~~vL~l~s~g~t~~~~~~L~~aL~~~~~  603 (755)
T PRK15029        560 TAWLGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKR  603 (755)
T ss_pred             HHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence            99998889999988888888888899999999999999987755

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.06  E-value=1.1e-08  Score=92.66  Aligned_cols=233  Identities=15%  Similarity=0.109  Sum_probs=141.3

Q ss_pred             CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-ccccc-----cccccccc-
Q 021893           46 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARS-----GRMLASDW-  117 (306)
Q Consensus        46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~-----g~~~~~~~-  117 (306)
                      |++.||++|+.+. ++++++.++..+|..|..+.+.+.++++.++|++||+.||.|.++. |....     +.....+. 
T Consensus       155 D~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~  234 (450)
T TIGR02618       155 DLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIA  234 (450)
T ss_pred             CHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHH
Confidence            8999999998632 3566677666666654466778889999999999999999999997 21110     00000011 


Q ss_pred             -----CCCCCcEEEec--ccccCCcccce-eeE-eCHHHHhhcCCCCcc-CC---CCC-CHHHHHHHHHHHHHHhhccHH
Q 021893          118 -----EEVRPDMVILG--KALGGGVIPVS-AVL-ADKEVMLCIQPGEHG-ST---FGG-NPLASAVAIASLDVIRDEKLA  183 (306)
Q Consensus       118 -----~~~~~d~~s~s--K~~~~G~~~~g-~~~-~~~~~~~~~~~~~~~-~~---~~~-~~~~~~aa~~al~~~~~~~~~  183 (306)
                           .--..|.+++|  |..+  . ++| +++ .+++++++++..... ..   +.+ ..-.+.+...+++...+..+.
T Consensus       235 ei~~e~~~~aD~~~~S~~Kd~~--~-~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~  311 (450)
T TIGR02618       235 EILKEMMSYADGCTMSGKKDCL--V-NIGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYI  311 (450)
T ss_pred             HHHHHHhccCcEEEEeeccCCC--C-CCceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHH
Confidence                 01123554443  3333  2 433 355 478888887654111 22   221 112333444456655555567


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec----CC-ChhhHHHHHHHHHHC-Cceecc----------
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK----TA-LPVSAYDICLKMKER-GILAKP----------  247 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~----~~-~~~~~~~~~~~l~~~-Gi~~~~----------  247 (306)
                      ++.....++|.+.|++.+     .....+..|+.+.++...    .+ ....+..++..|..+ ||-...          
T Consensus       312 ~~r~~~a~~La~~L~~~G-----vpv~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~  386 (450)
T TIGR02618       312 EHRVKQVRYLGDKLKAAG-----VPIVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNN  386 (450)
T ss_pred             HHHHHHHHHHHHHHHHCC-----CcccCCCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCC
Confidence            777778899999999883     222335666777776432    11 122466777777655 544321          


Q ss_pred             C-------CCCEEEEeCCC-CCCHHHHHHHHHHHHHHHhhhcCCCCCC
Q 021893          248 T-------HDTIVRLTPPL-SISSNELQEGSKALHDVLELDLPKMRKP  287 (306)
Q Consensus       248 ~-------~~~~lRi~~~~-~~t~~~i~~~~~~l~~~l~~~~~~~~~~  287 (306)
                      .       .-..+|+.+|- .-|.+.++...+++....+ .-..+++-
T Consensus       387 ~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~-~~~~~~g~  433 (450)
T TIGR02618       387 VTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYK-HRDDIRGL  433 (450)
T ss_pred             CCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHh-hHhhcCce
Confidence            0       12679998863 4588999999999998888 55554443

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>PLN02452 phosphoserine transaminase

Probab=99.05  E-value=8.7e-09  Score=92.56  Aligned_cols=199  Identities=11%  Similarity=0.014  Sum_probs=139.1

Q ss_pred             CcEEEEEEccccCCCCcc-cCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCccc
Q 021893           59 DQIAGFLFEPIQGEAGVI-IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIP  137 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~-~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~  137 (306)
                      ++...+.+.++...+|.. .+    ++++.      ++++|+|.+++ +  .+..+..+.++  .++.+..|.+| .. +
T Consensus       144 ~~~~~v~~~hnETstGv~~~~----~~~i~------~~~lvVDa~Ss-~--g~~pidv~~~~--v~~~saqK~lG-P~-G  206 (365)
T PLN02452        144 PDAKFVHICANETIHGVEFKD----YPDVG------NVPLVADMSSN-F--LSKPVDVSKYG--VIYAGAQKNVG-PS-G  206 (365)
T ss_pred             CCCcEEEECCCCCCCcEecCc----ccccC------CCeEEEECCcc-c--cCcccCHHHcC--EEEEecccccC-CC-C
Confidence            468899999999999974 44    55543      38999999997 2  23344445554  47778889996 33 6


Q ss_pred             ceeeEeCHHHHhhcCCC-----------CccCC-CCCCHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHHHHHHHH
Q 021893          138 VSAVLADKEVMLCIQPG-----------EHGST-FGGNPLASAVAIASLDVIRDE----KLAERSAHLGEELRQHLFKIQ  201 (306)
Q Consensus       138 ~g~~~~~~~~~~~~~~~-----------~~~~~-~~~~~~~~~aa~~al~~~~~~----~~~~~~~~~~~~l~~~L~~~~  201 (306)
                      +|++++++++++++.+.           ..... ++++..++.+..++++++.++    .+.++.+++.+++++.|++..
T Consensus       207 l~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~  286 (365)
T PLN02452        207 VTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESN  286 (365)
T ss_pred             eEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            78899999998776532           11122 255666777888999998764    367788888888888888742


Q ss_pred             hhCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          202 QQFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       202 ~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .-+. ...... .+...+.+.++.   .....+|.+.+.++|+...++.  -+.+|++.-...+.++++.+++.+++.-+
T Consensus       287 G~y~-~~~~~~~rs~~~vsF~~~~---~~~~~~f~~~~~~~g~~~~~G~r~~gg~R~s~yna~~~~~v~~L~~~m~~f~~  362 (365)
T PLN02452        287 GFYV-CPVEKSVRSLMNVPFTLGG---SELEAEFVKEAAKAGMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA  362 (365)
T ss_pred             Cccc-CCCChHHhCCeEEEEEcCC---chhHHHHHHHHHHCCCcccCCccccCceEEECcCCCCHHHHHHHHHHHHHHHH
Confidence            1111 111111 234456666654   2367789999999999998863  23499998888999999999999988765

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=99.04  E-value=8.2e-09  Score=92.82  Aligned_cols=199  Identities=14%  Similarity=0.073  Sum_probs=130.3

Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--EecccccCCcccceee
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAV  141 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~g~~  141 (306)
                      |++.++..++|...+    ++++...+  +++++|+|.+-+ +  .+..+..+  +  .|++  +..|++++.. +++++
T Consensus       131 v~~vhnETSTGv~np----v~~i~~~~--~~~lliVDavSs-~--g~~~l~~d--~--iDv~~tgsQK~L~~pp-Gls~v  196 (374)
T TIGR01365       131 VVFTWNGTTSGVRVP----NGDFIPAD--REGLTICDATSA-A--FAQDLDYH--K--LDVVTFSWQKVLGGEG-AHGML  196 (374)
T ss_pred             EEEecCCCchheecc----cccccccc--CCCcEEEEccch-h--cCCCCChh--H--CcEEEEechhccCCCC-ceEEE
Confidence            568888888998887    65554322  589999999887 2  23334333  3  4554  5669999655 77889


Q ss_pred             EeCHHHHhhcCCC-------C----------------ccCCCCCCHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHH
Q 021893          142 LADKEVMLCIQPG-------E----------------HGSTFGGNPLASAVAIASLDVIRDE----KLAERSAHLGEELR  194 (306)
Q Consensus       142 ~~~~~~~~~~~~~-------~----------------~~~~~~~~~~~~~aa~~al~~~~~~----~~~~~~~~~~~~l~  194 (306)
                      +.+++.+++....       .                ....++++...+.++..+++++.++    +..++.+++.+.++
T Consensus       197 ~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~  276 (374)
T TIGR01365       197 ILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLE  276 (374)
T ss_pred             EECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence            9999888664421       0                1112233444666666777766553    35778888888888


Q ss_pred             HHHHHHH-hhCCCceeeE-EEeeeEEEEEEecCC-------Chhh-HHHHHHHHHHCCceeccCC----CCEEEEeCCCC
Q 021893          195 QHLFKIQ-QQFPNYVKEV-RGRGLFNAVEFDKTA-------LPVS-AYDICLKMKERGILAKPTH----DTIVRLTPPLS  260 (306)
Q Consensus       195 ~~L~~~~-~~~~~~~~~~-~~~g~~~~i~~~~~~-------~~~~-~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~  260 (306)
                      +.+++++ ..+  ..... ..+..+..+.+++..       ...+ ..++.+.|.++|+.+.++.    +..+||.....
T Consensus       277 ~~l~~lg~l~~--~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~  354 (374)
T TIGR01365       277 AFVAKNNWIHF--LAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGAT  354 (374)
T ss_pred             HHHHHCCCccc--CCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCc
Confidence            8888875 221  11101 123333445553311       0111 5789999999999888652    47899999999


Q ss_pred             CCHHHHHHHHHHHHHHHh
Q 021893          261 ISSNELQEGSKALHDVLE  278 (306)
Q Consensus       261 ~t~~~i~~~~~~l~~~l~  278 (306)
                      .+.+|++.+++.|+=+.+
T Consensus       355 i~~~di~~l~~~l~~~~~  372 (374)
T TIGR01365       355 VEKSDLECLCPWLDWAFA  372 (374)
T ss_pred             CCHHHHHHHHHHHHHHHh
Confidence            999999999999975554

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>PLN02263 serine decarboxylase

Probab=99.04  E-value=1.3e-07  Score=86.80  Aligned_cols=208  Identities=14%  Similarity=0.036  Sum_probs=132.8

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCC-----EEEEehhhhccccc----ccccccc
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNI-----LMIADEIQSGLARS----GRMLASD  116 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi-----~li~De~~~g~~~~----g~~~~~~  116 (306)
                      |+++|+++|.++..++.+|+.+....++|.+=+    +++|.++|+++|+     +|.+|.+++|+...    ...+.+ 
T Consensus       214 D~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp----i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df-  288 (470)
T PLN02263        214 DCADFKAKLLANKDKPAIINVNIGTTVKGAVDD----LDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTF-  288 (470)
T ss_pred             cHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC----HHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCC-
Confidence            799999999876445677777878888898877    9999999999997     99999999985221    111111 


Q ss_pred             cCCCCCcEEEec--ccccCCcccceeeEeCHHHHhhcCCCC-----ccCCCCC--CHHHHHHHHHHHHHHhhccHHHHH-
Q 021893          117 WEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGE-----HGSTFGG--NPLASAVAIASLDVIRDEKLAERS-  186 (306)
Q Consensus       117 ~~~~~~d~~s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~aa~~al~~~~~~~~~~~~-  186 (306)
                        ....|-++++  |.++..+ ++|.++.+++.++.+....     ...+..+  +......++.+++.+..+++.+.+ 
T Consensus       289 --~~~vDSIsvD~HK~l~~P~-~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~  365 (470)
T PLN02263        289 --KKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQ  365 (470)
T ss_pred             --CcCccEEEECCccccCCCc-CEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHH
Confidence              1124555554  9998888 9998988876554443210     0012222  223455666777777665554444 


Q ss_pred             --HHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHH
Q 021893          187 --AHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSN  264 (306)
Q Consensus       187 --~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~  264 (306)
                        .++.+++.++|++..     .........+.+.+..+.      ..     ...+|-.+... ++.+++..+...+++
T Consensus       366 ~~~~~A~~l~~~l~~~g-----~~~~~~p~s~~V~f~~p~------~~-----~~~~gW~L~~~-~~~~Hivvmphv~~~  428 (470)
T PLN02263        366 KCLRNAHYLKDRLREAG-----ISAMLNELSSTVVFERPK------DE-----EFVRRWQLACQ-GNIAHVVVMPSVTIE  428 (470)
T ss_pred             HHHHHHHHHHHHHHhCC-----CeEEeCCCceEEEEecCc------hH-----HhhcceEEccC-CCcEEEEEcCCCCHH
Confidence              455666666666652     222233334444443221      11     12456665554 356888887777899


Q ss_pred             HHHHHHHHHHHHHh
Q 021893          265 ELQEGSKALHDVLE  278 (306)
Q Consensus       265 ~i~~~~~~l~~~l~  278 (306)
                      .++++++.|++..+
T Consensus       429 ~id~fi~DL~~~~~  442 (470)
T PLN02263        429 KLDYFLKELVEKRS  442 (470)
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999988776

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.02  E-value=4.4e-09  Score=94.85  Aligned_cols=252  Identities=19%  Similarity=0.156  Sum_probs=138.2

Q ss_pred             eEEEEecCCCCcccchhcccCC-ccccccCCCCCCCc---ccccCCCHHHHHHHHHhcCCcEE---EEEEccccCCCCcc
Q 021893            4 IIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGH---LKVDFGDITALEKIFKESGDQIA---GFLFEPIQGEAGVI   76 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~d~~~le~~i~~~~~~~~---~v~v~~~~~~~G~~   76 (306)
                      +.|.+..+-|=..+.++.+++- +.+..+... ..+.   +....-+.+.++++|+++++..+   +++++|.+  .|..
T Consensus       107 d~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~-~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY--~Gv~  183 (417)
T PF01276_consen  107 DKVLVDRNCHKSVYNALILSGAIPVYIPPEDN-EYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY--YGVC  183 (417)
T ss_dssp             CEEEEETT--HHHHHHHHHHTEEEEEEEEEE--TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T--TSEE
T ss_pred             CEEEEcCCcHHHHHHHHHHcCCeEEEecCCcc-ccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC--CeEE
Confidence            3455666666666667766662 222221100 0111   11111235999999999875544   56665544  5788


Q ss_pred             cCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc-------EEEec--ccccCCcccceeeEeCHHH
Q 021893           77 IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD-------MVILG--KALGGGVIPVSAVLADKEV  147 (306)
Q Consensus        77 ~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d-------~~s~s--K~~~~G~~~~g~~~~~~~~  147 (306)
                      .+    +++|.++|++++++|++||+|++..... .+..+...+..|       +++-|  |.+++-- ..+++..+.+.
T Consensus       184 ~d----i~~I~~~~h~~~~~llvDEAhGah~~F~-~lp~~a~~~gad~~~~~~~~vvqS~HKtL~alt-Qts~lh~~~~~  257 (417)
T PF01276_consen  184 YD----IKEIAEICHKHGIPLLVDEAHGAHFGFH-PLPRSALALGADRPNDPGIIVVQSTHKTLPALT-QTSMLHVKGDR  257 (417)
T ss_dssp             E-----HHHHHHHHCCTECEEEEE-TT-TTGGCS-GGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS-T-T-EEEEEETCC
T ss_pred             EC----HHHHHHHhcccCCEEEEEccccccccCC-CCccchhhccCccccccceeeeechhhcccccc-cceEEEecCCC
Confidence            88    9999999999999999999998532222 333455566777       77666  8886443 66667765442


Q ss_pred             -H--hhcCCC-CccCCCCCCHHHHHHHHHHHHHH-hh--ccHHHHHHHHHHHHHHHHHHHHhh--CC-CceeeEEEee--
Q 021893          148 -M--LCIQPG-EHGSTFGGNPLASAVAIASLDVI-RD--EKLAERSAHLGEELRQHLFKIQQQ--FP-NYVKEVRGRG--  215 (306)
Q Consensus       148 -~--~~~~~~-~~~~~~~~~~~~~~aa~~al~~~-~~--~~~~~~~~~~~~~l~~~L~~~~~~--~~-~~~~~~~~~g--  215 (306)
                       +  +++... ....+.+++.+.+++...+.+++ ..  .++.++..++.+.+|+.+++....  +. .....+...+  
T Consensus       258 ~v~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~  337 (417)
T PF01276_consen  258 IVDHERVNEALSMHQTTSPSYPLMASLDVARAQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCW  337 (417)
T ss_dssp             CTTHHHHHHHHHHHS-SS--HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGC
T ss_pred             cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCcccc
Confidence             2  233221 23345556777777777888887 33  346778888888899988663211  00 0000111111  


Q ss_pred             -----------------------eEEEEEEec-------CCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHH
Q 021893          216 -----------------------LFNAVEFDK-------TALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSN  264 (306)
Q Consensus       216 -----------------------~~~~i~~~~-------~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~  264 (306)
                                             .=+.+..+.       ...+..+..+.+.|.++||.+.-.+...+-+-.+...|++
T Consensus       338 ~~~~~~~whgf~~~~~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~d~~~vL~l~t~G~t~~  416 (417)
T PF01276_consen  338 DLDPGENWHGFEGLADDYYMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLREHGIQVEKTDLYNVLFLFTIGDTKE  416 (417)
T ss_dssp             B--TT-TTT--TT--TTSEEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-SEEESSEEEEE--TTS-HH
T ss_pred             ccCccccchhchhcccCccccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEEeccCccEEEEecCCCCCC
Confidence                                   112333311       1134567788999999999998877777777766666654

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=98.99  E-value=3.4e-09  Score=84.50  Aligned_cols=78  Identities=28%  Similarity=0.451  Sum_probs=60.4

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEec--ccccCCcc
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVI  136 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~  136 (306)
                      +++++++++++++++|...+    +++|.++|+++|+++|+|++|.++......  .......+|+++.|  |.+++ . 
T Consensus        91 ~~~~~v~~~~~~~~~g~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~~~-~-  162 (170)
T cd01494          91 PNVALIVITPNTTSGGVLVP----LKEIRKIAKEYGILLLVDAASAGGASPAPG--VLIPEGGADVVTFSLHKNLGG-E-  162 (170)
T ss_pred             CceEEEEEecCcCCCCeEcC----HHHHHHHHHHcCCEEEEecccccccccccc--cccccccCCEEEEEcccccCC-C-
Confidence            67999999999999998887    799999999999999999999865333221  12223456777555  99987 6 


Q ss_pred             cceeeEeC
Q 021893          137 PVSAVLAD  144 (306)
Q Consensus       137 ~~g~~~~~  144 (306)
                      ++|+++++
T Consensus       163 ~~G~l~~~  170 (170)
T cd01494         163 GGGVVIVK  170 (170)
T ss_pred             ceEEEEeC
Confidence            88988764

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=98.95  E-value=1.4e-08  Score=91.34  Aligned_cols=207  Identities=18%  Similarity=0.195  Sum_probs=120.6

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |.+.++++++++  ++++|++-....+  ...+    +++++++|++.|.+|++|-+|. |+...|. ++ +.+.. .|+
T Consensus       157 D~d~l~~~a~~~--kPklIi~G~S~y~--~~~d----~~~~reIad~vga~l~~D~sH~~GLIa~g~-~~-~P~~~-ADv  225 (399)
T PF00464_consen  157 DYDELEKLAKEH--KPKLIICGASSYP--RPID----FKRFREIADEVGAYLMADISHIAGLIAGGL-FP-NPFPY-ADV  225 (399)
T ss_dssp             -HHHHHHHHHHH----SEEEEE-SSTS--S-------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTS-S---GCCT-SSE
T ss_pred             CHHHHHHHHhhc--CCCEEEECchhcc--CccC----HHHHHHHHHhcCcEEEecccccccceehhe-ec-Ccccc-ceE
Confidence            799999999986  6788888665432  2344    8999999999999999999997 6643333 32 33333 688


Q ss_pred             EEec--ccccCCcccceeeEeC--------------HHHHhhcCCCCccCCCCCCHH-HHHHHHHHHHHHhh---ccHHH
Q 021893          125 VILG--KALGGGVIPVSAVLAD--------------KEVMLCIQPGEHGSTFGGNPL-ASAVAIASLDVIRD---EKLAE  184 (306)
Q Consensus       125 ~s~s--K~~~~G~~~~g~~~~~--------------~~~~~~~~~~~~~~~~~~~~~-~~~aa~~al~~~~~---~~~~~  184 (306)
                      ++.|  |.|.|.  +-|.+..+              +++.+++......+...++-. .+++...++..+.+   .++.+
T Consensus       226 vt~sThKtl~GP--rggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~  303 (399)
T PF00464_consen  226 VTGSTHKTLRGP--RGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAK  303 (399)
T ss_dssp             EEEESSGGG-SS--S-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred             EEeecccccccc--CceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHH
Confidence            8665  999744  56668888              677776664322222222222 33333345555433   35778


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc----C-----CCCEEEE
Q 021893          185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP----T-----HDTIVRL  255 (306)
Q Consensus       185 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~-----~~~~lRi  255 (306)
                      ++.++.+.|.+.|++.+...   + .-.-...++++++...  +.+..+..+.|.+.||.+-.    .     .+..||+
T Consensus       304 qVv~NAk~La~~L~~~G~~v---~-~ggTd~H~vlvd~~~~--~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRl  377 (399)
T PF00464_consen  304 QVVKNAKALAEALQERGFKV---V-TGGTDNHQVLVDLRSF--GIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRL  377 (399)
T ss_dssp             HHHHHHHHHHHHHHHTT-EE---G-GGS-SSSEEEEEGGGG--TS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEE
T ss_pred             HHHHHHHHHHHHHhhCCcEE---E-ECCCCCCeEEEEeccc--ccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEE
Confidence            88899999999998875331   1 1123455667777542  34566777888888998852    2     2457999


Q ss_pred             eCCC----CCCHHHHHHHHH
Q 021893          256 TPPL----SISSNELQEGSK  271 (306)
Q Consensus       256 ~~~~----~~t~~~i~~~~~  271 (306)
                      ..+.    ...++|++++.+
T Consensus       378 GT~~lT~rG~~e~dm~~iA~  397 (399)
T PF00464_consen  378 GTPALTRRGMKEEDMKEIAE  397 (399)
T ss_dssp             ESHHHHHTT--HHHHHHHHH
T ss_pred             CCHHHHhCCCCHHHHHHHHh
Confidence            8542    345556655444

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=98.95  E-value=3.4e-07  Score=80.28  Aligned_cols=213  Identities=17%  Similarity=0.203  Sum_probs=136.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |.|++++...++  ++++|++=  .+......+    +++++++|++.|.+|++|-+|- |+...|. ++ +.... .|+
T Consensus       154 DyD~~~k~a~e~--kPK~ii~G--~SaY~r~id----~~~~reIad~VGA~L~~DmAHiaGLVA~G~-~p-~P~~~-Adv  222 (413)
T COG0112         154 DYDEVEKLAKEV--KPKLIIAG--GSAYSRPID----FKRFREIADEVGAYLMVDMAHVAGLIAGGV-HP-NPLPH-ADV  222 (413)
T ss_pred             CHHHHHHHHHHh--CCCEEEEC--ccccccccC----HHHHHHHHHHhCceEEehHHHHHHHHhccc-CC-CCCCc-cce
Confidence            789999999986  56666663  333334566    9999999999999999999996 6644443 22 22222 577


Q ss_pred             EEec--ccccCCcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHH-HHHHHHHHHhh---ccHHHHHHHHHHHHHHHH
Q 021893          125 VILG--KALGGGVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASA-VAIASLDVIRD---EKLAERSAHLGEELRQHL  197 (306)
Q Consensus       125 ~s~s--K~~~~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-aa~~al~~~~~---~~~~~~~~~~~~~l~~~L  197 (306)
                      ++.+  |+|.|.  |-|.++.+ +++.+++...-..+...++-+-.. +-..++....+   .++.+++.++.+.|.+.|
T Consensus       223 VTtTTHKTlrGP--rGG~Il~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l  300 (413)
T COG0112         223 VTTTTHKTLRGP--RGGIILTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEAL  300 (413)
T ss_pred             EeCCcccCCCCC--CceEEEeccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHH
Confidence            7544  999743  55668887 588888876444333333333333 32344444443   346778888888888888


Q ss_pred             HHHHhhCCCceeeEEE-eeeEEEEEEecCCChhhHHHHHHHHHHCCceecc----C------CCCEEEEeCCC----CCC
Q 021893          198 FKIQQQFPNYVKEVRG-RGLFNAVEFDKTALPVSAYDICLKMKERGILAKP----T------HDTIVRLTPPL----SIS  262 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~------~~~~lRi~~~~----~~t  262 (306)
                      .+.+..     ....+ ...++.+++.+.  +.........|-+-||.+-.    +      .+..||+..+.    ...
T Consensus       301 ~~~G~~-----vvsGgTdnHl~lVDl~~~--~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~  373 (413)
T COG0112         301 KERGFK-----VVSGGTDNHLVLVDLRSK--GLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFG  373 (413)
T ss_pred             HHcCCe-----EecCCccceEEEEEcccC--CCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCC
Confidence            886422     22233 445556666631  34555666666666887652    2      24568998653    345


Q ss_pred             HHHHHHHHHHHHHHHh
Q 021893          263 SNELQEGSKALHDVLE  278 (306)
Q Consensus       263 ~~~i~~~~~~l~~~l~  278 (306)
                      ++|+++..+.|.+++.
T Consensus       374 e~e~~~Ia~~I~~vl~  389 (413)
T COG0112         374 EAEMEEIADLIADVLD  389 (413)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            6788888888888877

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=98.92  E-value=1.6e-07  Score=84.65  Aligned_cols=232  Identities=19%  Similarity=0.156  Sum_probs=139.9

Q ss_pred             CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc----c------cccccccc
Q 021893           46 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG----L------ARSGRMLA  114 (306)
Q Consensus        46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g----~------~~~g~~~~  114 (306)
                      |++.|+++|++++ +++..+.+.-.+|..|..+.+.+.++++.++|++||+.++.|.+.-.    |      +..+....
T Consensus       168 dl~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~  247 (467)
T TIGR02617       168 DLEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIE  247 (467)
T ss_pred             CHHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHH
Confidence            8999999999754 34555555555666677788999999999999999999999987641    1      11222110


Q ss_pred             --cccCCCCCcE--EEecccccCCcccce-eeEeC-H---HHHhhcCCC----CccCCCCC-CHHHHHHHHHHHHHHhhc
Q 021893          115 --SDWEEVRPDM--VILGKALGGGVIPVS-AVLAD-K---EVMLCIQPG----EHGSTFGG-NPLASAVAIASLDVIRDE  180 (306)
Q Consensus       115 --~~~~~~~~d~--~s~sK~~~~G~~~~g-~~~~~-~---~~~~~~~~~----~~~~~~~~-~~~~~~aa~~al~~~~~~  180 (306)
                        ....--..|.  +|+||+++   +++| +++++ +   ++.++++..    -...+|.+ +.--+-+....|+..-++
T Consensus       248 eI~rE~~~~aDsvt~slsKglg---ApvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~  324 (467)
T TIGR02617       248 QITRETYKYADMLAMSAKKDAM---VPMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNL  324 (467)
T ss_pred             HHHHHhhccCCEEEEEcCCCCC---CcccceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccH
Confidence              0000112354  47889887   2433 36665 4   455555432    12234432 222333333455555555


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE----ecCC-ChhhHHHHHHHHHHC-Cceecc-------
Q 021893          181 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF----DKTA-LPVSAYDICLKMKER-GILAKP-------  247 (306)
Q Consensus       181 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~----~~~~-~~~~~~~~~~~l~~~-Gi~~~~-------  247 (306)
                      ++..+-....++|.++|.+.+     +.... ..|.-+.++.    +..+ ....+..++-.|..+ ||-...       
T Consensus       325 ~yl~~ri~qv~yl~~~L~~~G-----vpi~~-~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~  398 (467)
T TIGR02617       325 DWLAYRINQVQYLVNGLEEIG-----VVCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLG  398 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHhCC-----CcEEe-cCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecc
Confidence            667777777888888888874     32333 4455444542    2221 123466787777655 554221       


Q ss_pred             ---C-------CCCEEEEeCCC-CCCHHHHHHHHHHHHHHHhhhcCCCCCC
Q 021893          248 ---T-------HDTIVRLTPPL-SISSNELQEGSKALHDVLELDLPKMRKP  287 (306)
Q Consensus       248 ---~-------~~~~lRi~~~~-~~t~~~i~~~~~~l~~~l~~~~~~~~~~  287 (306)
                         .       .-..+|++++- .-|.+.++...+++....+ .-..+++-
T Consensus       399 rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~-~~~~i~g~  448 (467)
T TIGR02617       399 RDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKE-NAPNIKGL  448 (467)
T ss_pred             cCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHh-hhhhcCCe
Confidence               0       12679998863 4588999999999998888 55444443

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=98.92  E-value=2.4e-08  Score=87.06  Aligned_cols=216  Identities=19%  Similarity=0.229  Sum_probs=128.8

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc--ccccccC-CCCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR--MLASDWE-EVRP  122 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~--~~~~~~~-~~~~  122 (306)
                      |++.+-+.|++.++...+++-.+-||||| +-++.+.|++|.++.++.+++-++|=+|-||+....  ......+ ...+
T Consensus       158 df~~mla~L~~a~~~~vvLLH~CcHNPTG-~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~  236 (396)
T COG1448         158 DFDGMLADLKTAPEGSVVLLHGCCHNPTG-IDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGP  236 (396)
T ss_pred             cHHHHHHHHHhCCCCCEEEEecCCCCCCC-CCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCC
Confidence            67888888887766666777777889998 457999999999999999999999999998842211  0111110 1122


Q ss_pred             c---EEEeccccc-CCcccceeeEe---CHHHHhhcCCC---CccCCCCCCH-HHHHHHHH-----HHHHHhh---ccHH
Q 021893          123 D---MVILGKALG-GGVIPVSAVLA---DKEVMLCIQPG---EHGSTFGGNP-LASAVAIA-----SLDVIRD---EKLA  183 (306)
Q Consensus       123 d---~~s~sK~~~-~G~~~~g~~~~---~~~~~~~~~~~---~~~~~~~~~~-~~~~aa~~-----al~~~~~---~~~~  183 (306)
                      .   ..|+||.|+ =|- |+|.+..   +++..+.+...   ..-..|+.++ -++.....     .|+..-.   ++.+
T Consensus       237 ~~lva~S~SKnfgLYgE-RVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr  315 (396)
T COG1448         237 ELLVASSFSKNFGLYGE-RVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMR  315 (396)
T ss_pred             cEEEEehhhhhhhhhhh-ccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence            2   238899999 465 7875432   34433333211   1112333222 12222221     1221111   3456


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCH
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISS  263 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~  263 (306)
                      .++.+.+..+.+.|.+....- .+.......|++...       +...+++.+..-+.||++...+    |+++. ..++
T Consensus       316 ~Ri~~mR~~lv~~L~~~~~~~-~f~~i~~Q~GMFsy~-------Gls~~QV~rLree~~IY~v~sG----Ri~va-Gl~~  382 (396)
T COG1448         316 QRILEMRQALVDALKALGAPR-NFDFIISQRGMFSYT-------GLSPEQVDRLREEFGIYLVASG----RINVA-GLNT  382 (396)
T ss_pred             HHHHHHHHHHHHHHHhhCCCc-ccchHhhcCceeecC-------CCCHHHHHHHHHhccEEEecCC----eeeec-cCCh
Confidence            677777777777777744321 233444556655432       2334444444456699987754    77763 5678


Q ss_pred             HHHHHHHHHHHHH
Q 021893          264 NELQEGSKALHDV  276 (306)
Q Consensus       264 ~~i~~~~~~l~~~  276 (306)
                      ..++.+++.|.++
T Consensus       383 ~ni~~va~ai~~v  395 (396)
T COG1448         383 SNIDYVAKAIAAV  395 (396)
T ss_pred             hhHHHHHHHHHhh
Confidence            8999999988765

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=98.90  E-value=1.5e-07  Score=93.58  Aligned_cols=193  Identities=14%  Similarity=0.085  Sum_probs=119.3

Q ss_pred             cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEec--ccc---c-C
Q 021893           60 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KAL---G-G  133 (306)
Q Consensus        60 ~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~s--K~~---~-~  133 (306)
                      .+..++ ....+.+|.+.+    +++|.++||++|+++++ .++.    .+.....+.-++..|+++.+  |..   | |
T Consensus       234 ~v~~vl-vq~P~~~G~v~d----v~~I~~~ah~~GaL~iV-aad~----lal~~l~~pge~GADi~vgsgqKwg~P~G~G  303 (993)
T PLN02414        234 DVCGVL-VQYPATDGEVLD----YAEFVKNAHANGVKVVM-ATDL----LALTMLKPPGEWGADIVVGSAQRFGVPMGYG  303 (993)
T ss_pred             ceEEEE-EecCCCCeEEcC----HHHHHHHHHHcCCEEEE-EECH----HHhcCCCCHhhccCcEEEECCCccccCCCCC
Confidence            455554 445556788888    99999999999999999 4443    11111011223456766443  543   2 6


Q ss_pred             CcccceeeEeCHHHHhhcCCC-------Ccc-C----------------CCCCCHH---HHHHHHHHHH--HHhh---cc
Q 021893          134 GVIPVSAVLADKEVMLCIQPG-------EHG-S----------------TFGGNPL---ASAVAIASLD--VIRD---EK  181 (306)
Q Consensus       134 G~~~~g~~~~~~~~~~~~~~~-------~~~-~----------------~~~~~~~---~~~aa~~al~--~~~~---~~  181 (306)
                      |. ..|++++++++...+-+.       ... .                ..+.|.-   ++.++.+++.  .+..   ++
T Consensus       304 GP-~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~  382 (993)
T PLN02414        304 GP-HAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT  382 (993)
T ss_pred             CC-CeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHH
Confidence            77 799999999876644321       000 0                0022332   3333333221  1112   34


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCC
Q 021893          182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSI  261 (306)
Q Consensus       182 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~  261 (306)
                      +.+++.++..+++++|++.+..   .... +..+ .+.+.++      ...++.+.|.++||.++....+.+|+|++..+
T Consensus       383 Ia~ri~~la~~l~~~L~~~G~~---~~~~-~~f~-~vt~~~~------~~~~v~~~L~~~gI~l~~~~~~~lrvs~~e~~  451 (993)
T PLN02414        383 IAQRVHGLAGVFAAGLKKLGFQ---VQSL-PFFD-TVKVKCS------DADAIADAAAKVGINLRVVDANTVTVSFDETT  451 (993)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCc---cCCC-CCcC-eEEEecC------CHHHHHHHHHHCCCeeEEecCCeEEEEeeccC
Confidence            5678888888999988775322   1111 1111 2233332      34789999999999988766778999999999


Q ss_pred             CHHHHHHHHHHHH
Q 021893          262 SSNELQEGSKALH  274 (306)
Q Consensus       262 t~~~i~~~~~~l~  274 (306)
                      |++||+.+++.|.
T Consensus       452 T~edId~L~~~l~  464 (993)
T PLN02414        452 TLEDVDKLFKVFA  464 (993)
T ss_pred             CHHHHHHHHHHHc
Confidence            9999999999986

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=98.88  E-value=6.8e-07  Score=79.17  Aligned_cols=251  Identities=17%  Similarity=0.145  Sum_probs=160.5

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCC-----CHHHHHHHHHhcCCcEEEEEEccccCCCCcc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEPIQGEAGVI   76 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~   76 (306)
                      +++|+..-.|=||..-++.+..+            ..|+.++.+     |+++|++++.   ++++++.+..++..+  +
T Consensus       156 ~R~~~LIP~SAHGTNPASAam~G------------~~VV~V~~~~~G~VDlddLk~k~~---~~~AalMiTnPsT~G--v  218 (496)
T COG1003         156 HRNICLIPDSAHGTNPASAAMAG------------FKVVVVKCDENGNVDLDDLRAKAE---DNLAALMITNPSTLG--V  218 (496)
T ss_pred             cCcEEEeeccccCCChhhHhhcC------------ceEEEEecCCCCCccHHHHHHHhc---cceeEEEeccCcccc--c
Confidence            35666777777887655444444            134455543     8999999998   579888887776543  3


Q ss_pred             cCChhHHHHHHHHHHHcCCEEEEehhhh----cccccccccccccCCCCCcEE--Eeccccc-----CCcccceeeEeCH
Q 021893           77 IPPDGYLKAVRDLCSKYNILMIADEIQS----GLARSGRMLASDWEEVRPDMV--ILGKALG-----GGVIPVSAVLADK  145 (306)
Q Consensus        77 ~~~~~~l~~i~~l~~~~gi~li~De~~~----g~~~~g~~~~~~~~~~~~d~~--s~sK~~~-----~G~~~~g~~~~~~  145 (306)
                        -++-+.+|+++.+++|-.|..|.+--    |..+.|.        +..|++  -+-|.|+     ||. ++|=+.+++
T Consensus       219 --FE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd--------~G~DV~HlNLHKTF~iPHGGGGP-G~GPvgVk~  287 (496)
T COG1003         219 --FEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGD--------MGFDVVHLNLHKTFCIPHGGGGP-GAGPVGVKA  287 (496)
T ss_pred             --chhhHHHHHHHHHHcCCEEEecCcchhhhhccccccc--------cccceEEeecccccccCCCCCCC-CCCceehHh
Confidence              36669999999999999999998764    3323332        334544  3446664     566 667676666


Q ss_pred             HHHhhcCC----C---------------CccCCCCCCHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHHHHHHhh
Q 021893          146 EVMLCIQP----G---------------EHGSTFGGNPLASAVAIASLDVIRDEKL---AERSAHLGEELRQHLFKIQQQ  203 (306)
Q Consensus       146 ~~~~~~~~----~---------------~~~~~~~~~~~~~~aa~~al~~~~~~~~---~~~~~~~~~~l~~~L~~~~~~  203 (306)
                      .+...+-.    .               .....+.+|...+..++..+..+..+++   .+...-+..++..+|+.... 
T Consensus       288 ~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~-  366 (496)
T COG1003         288 HLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYP-  366 (496)
T ss_pred             hccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhcCc-
Confidence            65433321    0               0122234566677777777887776554   33444567777777776321 


Q ss_pred             CCCceeeEEE-eeeEEEEEEecC--CChhhHHHHHHHHHHCCceec----c-CCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          204 FPNYVKEVRG-RGLFNAVEFDKT--ALPVSAYDICLKMKERGILAK----P-THDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       204 ~~~~~~~~~~-~g~~~~i~~~~~--~~~~~~~~~~~~l~~~Gi~~~----~-~~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                         ..+.... ...=+.++..+.  ..+....+++++|++.|+..-    | .-.+.+.+=|.=.-+++++|++++++.+
T Consensus       367 ---~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~  443 (496)
T COG1003         367 ---VPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIA  443 (496)
T ss_pred             ---cccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHH
Confidence               1111111 111122222211  135678899999999998743    2 1367888888878899999999999999


Q ss_pred             HHhhhcCCCC
Q 021893          276 VLELDLPKMR  285 (306)
Q Consensus       276 ~l~~~~~~~~  285 (306)
                      +.+ +..+.+
T Consensus       444 I~~-Ea~~~~  452 (496)
T COG1003         444 IRE-EADAVP  452 (496)
T ss_pred             HHH-HHHhcc
Confidence            998 887765

>PRK05367 glycine dehydrogenase; Provisional

Probab=98.86  E-value=1.8e-07  Score=93.15  Aligned_cols=195  Identities=16%  Similarity=0.109  Sum_probs=122.6

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEE--ecccc---c-
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVI--LGKAL---G-  132 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s--~sK~~---~-  132 (306)
                      +++.++++ .+.+.+|.+.+    +++|.++||++|+++++|..+...   +...  +.-++..|++.  ..|..   + 
T Consensus       205 ~~~~~vlv-q~p~~~G~i~d----~~~i~~~ah~~Gal~~vda~~~Al---~~l~--~pge~GaDi~vgs~qkfg~P~g~  274 (954)
T PRK05367        205 DDVFGVLL-QYPGTSGEVRD----YTALIAAAHARGALVAVAADLLAL---TLLT--PPGEMGADIAVGSAQRFGVPMGF  274 (954)
T ss_pred             ccEEEEEE-ecCCCCeeecc----HHHHHHHHHHcCCEEEEEehhhhc---cCCC--ChhhcCCCEEEeeCcccCCCCCC
Confidence            35666544 44567788888    999999999999999999866311   1111  12234567653  34542   2 


Q ss_pred             CCcccceeeEeCHHHHhhcCCCCc-------cC--------------CC---CCC---HHHHHHHHHH--HHHHhh---c
Q 021893          133 GGVIPVSAVLADKEVMLCIQPGEH-------GS--------------TF---GGN---PLASAVAIAS--LDVIRD---E  180 (306)
Q Consensus       133 ~G~~~~g~~~~~~~~~~~~~~~~~-------~~--------------~~---~~~---~~~~~aa~~a--l~~~~~---~  180 (306)
                      ||. ..|++++++++...+.+...       ..              .+   +.|   ..++.++.++  +..+..   +
T Consensus       275 GGP-~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~  353 (954)
T PRK05367        275 GGP-HAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLK  353 (954)
T ss_pred             CCC-CEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHH
Confidence            677 78999999988777653210       00              00   111   1122222222  233333   3


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCC
Q 021893          181 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLS  260 (306)
Q Consensus       181 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~  260 (306)
                      ++.+++..+..+++++|+..+...   ...  .....+.+.++     .+..++.+.|.++||.++....+.+|++++..
T Consensus       354 ~Ia~~~~~la~~l~~~L~~~G~~~---~~~--~~f~~~~~~~~-----~~~~~i~~~l~~~gi~~~~~~~~~l~is~~e~  423 (954)
T PRK05367        354 AIARRVHRLAAILAAGLRALGLEV---VHD--SFFDTLTVEVG-----GDAAAVLARALAAGINLRRVDDDHVGISLDET  423 (954)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCccc---CCC--CCCCeEEEeCC-----CCHHHHHHHHHHCCceeccccCCEEEEEeccc
Confidence            456778888888888887643221   111  11111222222     35778999999999999776677899999999


Q ss_pred             CCHHHHHHHHHHHH
Q 021893          261 ISSNELQEGSKALH  274 (306)
Q Consensus       261 ~t~~~i~~~~~~l~  274 (306)
                      +|++||+.+++.|.
T Consensus       424 ~t~~did~l~~~l~  437 (954)
T PRK05367        424 TTREDLAALLAVFG  437 (954)
T ss_pred             CCHHHHHHHHHHHc
Confidence            99999999999996

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=98.81  E-value=8.5e-07  Score=85.13  Aligned_cols=223  Identities=11%  Similarity=0.068  Sum_probs=133.4

Q ss_pred             CHHHHHHHHHhcCCc---EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEE-EEehhhhcccccccccc-cccC--
Q 021893           46 DITALEKIFKESGDQ---IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILM-IADEIQSGLARSGRMLA-SDWE--  118 (306)
Q Consensus        46 d~~~le~~i~~~~~~---~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~l-i~De~~~g~~~~g~~~~-~~~~--  118 (306)
                      +.+.++++|+++++.   .++|+.+|  +..|...+    +++|.++|   |+.+ ++||+|.++......+. ....  
T Consensus       281 ~~e~I~~~i~~~p~~~~p~~vvit~p--TYdGi~yd----~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~sam~~  351 (713)
T PRK15399        281 TRDSIEEKVAATTQAQWPVHAVITNS--TYDGLLYN----TDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGKSGMSG  351 (713)
T ss_pred             cHHHHHHHHHhCCCcCCceEEEEECC--CCCceeeC----HHHHHHHh---CCCEEEEeccchhhhhcCcccCCcChhhC
Confidence            459999999988643   35555555  34677777    89999988   6777 59999986422222121 1111  


Q ss_pred             CCCCcEE---E--ecccccCCcccceeeEeCHHHH-hhcCCCC-ccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHH
Q 021893          119 EVRPDMV---I--LGKALGGGVIPVSAVLADKEVM-LCIQPGE-HGSTFGGNPLASAVAIASLDVIRD---EKLAERSAH  188 (306)
Q Consensus       119 ~~~~d~~---s--~sK~~~~G~~~~g~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~  188 (306)
                      +-.+|.+   +  .-|.+++-- ..+++..+..+- +++.... ...+.+++.+-+++...+.+++..   ..+.+...+
T Consensus       352 ~~~aD~~i~~tQStHKtL~alT-QaS~iHvk~~vd~~~~n~a~~m~~STSPsY~LmASLD~a~~~m~~~~G~~l~~~~i~  430 (713)
T PRK15399        352 ERVPGKVIFETQSTHKMLAAFS-QASLIHIKGEYDEETFNEAFMMHTSTSPSYPIVASVETAAAMLRGNPGKRLINRSVE  430 (713)
T ss_pred             CCCCCeeeeeeeehhccccccc-hheeeeecCCCCHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence            1135655   3  348886432 555676644321 1222211 222334455556666666666653   346677777


Q ss_pred             HHHHHHHHHHHHHhhCCCceeeEEEe-------------------------------eeEEEEEEecC-------CChhh
Q 021893          189 LGEELRQHLFKIQQQFPNYVKEVRGR-------------------------------GLFNAVEFDKT-------ALPVS  230 (306)
Q Consensus       189 ~~~~l~~~L~~~~~~~~~~~~~~~~~-------------------------------g~~~~i~~~~~-------~~~~~  230 (306)
                      ....+|+.+.++.....+|.+.+...                               -.=+.+..+..       ..+..
T Consensus       431 ~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~  510 (713)
T PRK15399        431 RALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIP  510 (713)
T ss_pred             HHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceEEEEecCcccccccccCCCC
Confidence            77888888877543111121111110                               00012222210       12455


Q ss_pred             HHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          231 AYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       231 ~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +..+.+.|.++||.+.-.+...+-+.++...++++++.+++.|.++-+
T Consensus       511 g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~L~~aL~~f~~  558 (713)
T PRK15399        511 AALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFKR  558 (713)
T ss_pred             HHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence            778999999999999998888888888899999999999999987644

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=98.79  E-value=4.7e-07  Score=86.88  Aligned_cols=266  Identities=11%  Similarity=0.028  Sum_probs=148.1

Q ss_pred             eEEEEecCCCCcccchhcccCC-ccccccCCC-C-CCCcccccCCCHHHHHHHHHhcCCcE---EEEEEccccCCCCccc
Q 021893            4 IIVSCCGCFHGRTLAAISMSCD-NEAIRGFGP-L-LPGHLKVDFGDITALEKIFKESGDQI---AGFLFEPIQGEAGVII   77 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~-~-~~~~~~~~~~d~~~le~~i~~~~~~~---~~v~v~~~~~~~G~~~   77 (306)
                      .+|.+..+-|=..+-++.+++- +.+..+... + ..+-+....-+.+.+++.|+++++..   ++|+.+|.  ..|...
T Consensus       236 d~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT--YdG~~y  313 (714)
T PRK15400        236 STVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST--YDGLLY  313 (714)
T ss_pred             CEEEeecccHHHHHHHHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC--CccEec
Confidence            3455666666666666666662 222221110 0 01111111225899999999886422   46666553  367787


Q ss_pred             CChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCC---c--EEEec--ccccCCcccceeeEeCHHHH-
Q 021893           78 PPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRP---D--MVILG--KALGGGVIPVSAVLADKEVM-  148 (306)
Q Consensus        78 ~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~---d--~~s~s--K~~~~G~~~~g~~~~~~~~~-  148 (306)
                      +    +++|.++|+.++  +++||+|.++......+. ........   |  +++-|  |.+++=- ..+++..+..+- 
T Consensus       314 d----~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~alT-QaS~LHvkg~vd~  386 (714)
T PRK15400        314 N----TDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFS-QASMIHVKGDVNE  386 (714)
T ss_pred             C----HHHHHHHhCCCC--EEEEccchhhhccCcccCCcChhhcCCCCCCceEEEEchhhcccchh-HHhHHHHcCCCCH
Confidence            7    999999999888  689999986422222221 11111112   3  55555  8776322 444454432210 


Q ss_pred             hhcCCC-CccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE-----------
Q 021893          149 LCIQPG-EHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG-----------  213 (306)
Q Consensus       149 ~~~~~~-~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-----------  213 (306)
                      +++... ....+.+++.+-+++...+.+++..   +.+.+...+....+|+.+.++.....+|...+..           
T Consensus       387 ~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~  466 (714)
T PRK15400        387 ETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWP  466 (714)
T ss_pred             HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcc
Confidence            111111 1222334455555666666666653   3356677777777888777654211111111110           


Q ss_pred             --------------------eeeEEEEEEecCC-------ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHH
Q 021893          214 --------------------RGLFNAVEFDKTA-------LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNEL  266 (306)
Q Consensus       214 --------------------~g~~~~i~~~~~~-------~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i  266 (306)
                                          .-.=+.+..+..+       .+..+..+.+.|.++||.+.-.+...+-+.++...+++++
T Consensus       467 ~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g~t~~~~  546 (714)
T PRK15400        467 LRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKA  546 (714)
T ss_pred             cCccccccCcccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHH
Confidence                                0000122222100       2344678899999999999998888888888899999999


Q ss_pred             HHHHHHHHHHHh
Q 021893          267 QEGSKALHDVLE  278 (306)
Q Consensus       267 ~~~~~~l~~~l~  278 (306)
                      +.+++.|.++-+
T Consensus       547 ~~L~~aL~~f~~  558 (714)
T PRK15400        547 LSLLRALTDFKR  558 (714)
T ss_pred             HHHHHHHHHHHH
Confidence            999999987644

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=98.77  E-value=2.1e-07  Score=82.32  Aligned_cols=225  Identities=13%  Similarity=0.113  Sum_probs=131.3

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc--c-cccccccccCCC-C
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA--R-SGRMLASDWEEV-R  121 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~--~-~g~~~~~~~~~~-~  121 (306)
                      |.+.+|+.+++.++...+.+++...+..+...   +.+++|.++|++||+++++..+|+ +-  . ....-.....|. +
T Consensus       140 d~~~ie~~i~~~G~~~iLcvltttscfapr~~---D~i~~IakiC~~~~IPhlvNnAYg-vQ~~~~~~~i~~a~~~GRvd  215 (389)
T PF05889_consen  140 DLEAIEAKIEELGADNILCVLTTTSCFAPRLP---DDIEEIAKICKEYDIPHLVNNAYG-VQSSKCMHLIQQAWRVGRVD  215 (389)
T ss_dssp             HHHHHHHHHHHHCGGGEEEEEEESSTTTTB-------HHHHHHHHHHHT--EEEEGTTT-TT-HHHHHHHHHHHHHSTCS
T ss_pred             cHHHHHHHHHHhCCCCeEEEEEecCccCCCCC---ccHHHHHHHHHHcCCceEEccchh-hhHHHHHHHHHHHHhcCCcc
Confidence            58999999998877788889988888877543   349999999999999999999997 10  0 000000001122 2


Q ss_pred             CcEEEecccccCCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHH
Q 021893          122 PDMVILGKALGGGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHL  197 (306)
Q Consensus       122 ~d~~s~sK~~~~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L  197 (306)
                      .++-++.|-|--+. +-+.+++ .+..+..+....-......+.+  -. ...+..+..   ..+.....+.-.+++++|
T Consensus       216 a~vqS~dkNF~VPv-Ggai~As~~~~~i~~vs~~YpGRas~sp~l--d~-~itLl~LG~~g~~~ll~~r~~~f~~l~erl  291 (389)
T PF05889_consen  216 AFVQSTDKNFMVPV-GGAIMASFDPSGILAVSKEYPGRASASPSL--DL-FITLLSLGCTGYGALLKERKASFPYLKERL  291 (389)
T ss_dssp             EEEEEHHHHHCEES-SHEEEEESSHHHHHHHHHTSHSHBTSHHHH--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeeeecCCCEEecC-CCcEEEecCHHHHHHHHHHhhhhhhcccch--HH-HHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence            23336668775221 1123444 4566665543222222211222  11 222223332   335667778888888999


Q ss_pred             HHHHhhCCCceeeEEEeeeEEEEEEecCC--ChhhHHHHHHHHHHCCce----eccC---C--------CCEEEEeCCCC
Q 021893          198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTA--LPVSAYDICLKMKERGIL----AKPT---H--------DTIVRLTPPLS  260 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~~~~~~~~l~~~Gi~----~~~~---~--------~~~lRi~~~~~  260 (306)
                      ++...+....+...+..-..+.+.++...  ...+...|...|..+||.    +.+.   .        -.++-++..+.
T Consensus       292 ~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG  371 (389)
T PF05889_consen  292 KKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIG  371 (389)
T ss_dssp             HHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT
T ss_pred             HHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhC
Confidence            99887765444454444455566665322  113457889999999654    2222   1        26788877789


Q ss_pred             CCHHHHHHHHHHHHHHHh
Q 021893          261 ISSNELQEGSKALHDVLE  278 (306)
Q Consensus       261 ~t~~~i~~~~~~l~~~l~  278 (306)
                      .+++|++.++++|++.++
T Consensus       372 ~~~eevd~~v~rL~k~i~  389 (389)
T PF05889_consen  372 MTREEVDYFVKRLDKIIK  389 (389)
T ss_dssp             --HHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHhC
Confidence            999999999999999874

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=98.73  E-value=9.3e-07  Score=78.96  Aligned_cols=200  Identities=18%  Similarity=0.124  Sum_probs=133.2

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccc
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPV  138 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~  138 (306)
                      ++.+.|.++++...+|...+         ++.+.+++++|+|-+-+ +  .+..+..+.|  +.-+.+..|.+| .- ++
T Consensus       142 ~d~~~v~~t~NETstGv~~~---------~~~~~~~~llvvD~sS~-~--~s~pid~~~~--dvi~agsQKnlg-P~-Gl  205 (364)
T PRK12462        142 ARAPFRHYVSNETVEGLQFP---------DAAGLPDSPLIADMSSD-F--MSRPFDVEAY--GMVYAHAQKNLG-PA-GV  205 (364)
T ss_pred             CCCcEEEEccCCCCceEecC---------cccccCCCeEEEEcCch-h--hCCCCChHHc--cEEEeeccccCC-CC-ce
Confidence            35778999999999997764         23334799999998876 2  2334444544  222336669998 33 66


Q ss_pred             eeeEeCHHHHhhcCCC-----------CccCCC-CCCHHHHHHHHHHHHHHhhc--c---HHHHHHHHHHHHHHHHHHHH
Q 021893          139 SAVLADKEVMLCIQPG-----------EHGSTF-GGNPLASAVAIASLDVIRDE--K---LAERSAHLGEELRQHLFKIQ  201 (306)
Q Consensus       139 g~~~~~~~~~~~~~~~-----------~~~~~~-~~~~~~~~aa~~al~~~~~~--~---~~~~~~~~~~~l~~~L~~~~  201 (306)
                      +.++.+++.+++....           ....++ +++...+-++..+++++.++  +   +.++.++..+.+++.+++..
T Consensus       206 tvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~  285 (364)
T PRK12462        206 TVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALN  285 (364)
T ss_pred             EEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            7888999988765432           111233 45566777788999999765  4   56677777777777777764


Q ss_pred             hhCCCceeeEEEeeeE-EEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          202 QQFPNYVKEVRGRGLF-NAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       202 ~~~~~~~~~~~~~g~~-~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .-+. .......+..+ +.|.+.+   .....+|.+.+.++|+.--.++  .+.+|.++--..+.+.++.+++-+++.-+
T Consensus       286 ~~~~-~~~~~~~RS~mnv~f~~~~---~~l~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~~L~~fm~~f~~  361 (364)
T PRK12462        286 EVID-CHAHRAARSTMNVAFRFRQ---PRLDTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAVSRLCAFLKDFAI  361 (364)
T ss_pred             Cccc-CCCChhhcCcceEEEEcCC---HHHHHHHHHHHHHCCCccccCCcccCceEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence            2221 11222222222 3444443   3456789999999999876543  46699998888899999999998877655

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=98.71  E-value=8.2e-06  Score=70.78  Aligned_cols=232  Identities=16%  Similarity=0.140  Sum_probs=136.8

Q ss_pred             CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc----ccccccccccccCCC
Q 021893           46 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG----LARSGRMLASDWEEV  120 (306)
Q Consensus        46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g----~~~~g~~~~~~~~~~  120 (306)
                      |++.|+++|++-+ +++..|++.-.+|..|.-+-+-+-++++.++|++||+.++.|.+..-    |......- ...|.+
T Consensus       170 D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~g-Yrd~sI  248 (471)
T COG3033         170 DLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPG-YRDWSI  248 (471)
T ss_pred             CHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcc-cccccH
Confidence            8999999999865 34666665555555555667888899999999999999999998741    21110000 111111


Q ss_pred             ---------CCcEEEec-ccccCCcccce-eeEeCHH----HHhhcCCCC----ccCCCCC-CHHHHHHHHHHHHHHhhc
Q 021893          121 ---------RPDMVILG-KALGGGVIPVS-AVLADKE----VMLCIQPGE----HGSTFGG-NPLASAVAIASLDVIRDE  180 (306)
Q Consensus       121 ---------~~d~~s~s-K~~~~G~~~~g-~~~~~~~----~~~~~~~~~----~~~~~~~-~~~~~~aa~~al~~~~~~  180 (306)
                               ..|-++.| |.=+  +..+| +++.+.+    +...++...    -..+|.+ ..-.+-+....|...-..
T Consensus       249 ~~IarEm~sYaD~~~mS~KKD~--lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~  326 (471)
T COG3033         249 EEIAREMYSYADGCTMSAKKDG--LVNMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNF  326 (471)
T ss_pred             HHHHHHHHhhhhhheeeccccc--eeccccEEEecCccHHHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcCc
Confidence                     12444444 3211  12333 2666655    555555321    1122221 222333333445544455


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe----cCC-ChhhHHHHHHHHHHC-CceeccC------
Q 021893          181 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD----KTA-LPVSAYDICLKMKER-GILAKPT------  248 (306)
Q Consensus       181 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~----~~~-~~~~~~~~~~~l~~~-Gi~~~~~------  248 (306)
                      ++..+-.+..++|.+.|++.+     +..-.+..|.-+.++..    ..+ ....++.|+-.|..+ ||-....      
T Consensus       327 ~yl~~Rv~Qv~YL~~~l~~~G-----Vpi~~paGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~~  401 (471)
T COG3033         327 DYLAHRVAQVQYLADGLEEAG-----VPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSLG  401 (471)
T ss_pred             HHHHHHHHHHHHHHHHHHhcC-----CeeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHHHHHhCeeeeeeeceecc
Confidence            577777788899999999884     33344455555555432    211 112366776666544 6665421      


Q ss_pred             -----------CCCEEEEeCCC-CCCHHHHHHHHHHHHHHHhhhcCCCCC
Q 021893          249 -----------HDTIVRLTPPL-SISSNELQEGSKALHDVLELDLPKMRK  286 (306)
Q Consensus       249 -----------~~~~lRi~~~~-~~t~~~i~~~~~~l~~~l~~~~~~~~~  286 (306)
                                 .-..+|+.++- .-|.+.+|..++.+++..+ .-.++++
T Consensus       402 rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e-~~~~ikg  450 (471)
T COG3033         402 RDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKE-NAEDIKG  450 (471)
T ss_pred             cCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHh-ccccCCC
Confidence                       23679999864 4488999999999998888 5544443

>PRK13578 ornithine decarboxylase; Provisional

Probab=98.69  E-value=3.2e-06  Score=81.31  Aligned_cols=226  Identities=13%  Similarity=0.047  Sum_probs=128.6

Q ss_pred             CHHHHHHHHHhcCCc-------EEEEEEccccCCCCcccCChhHHHHHHHH-HHHcCCEEEEehhhhcccccccc---cc
Q 021893           46 DITALEKIFKESGDQ-------IAGFLFEPIQGEAGVIIPPDGYLKAVRDL-CSKYNILMIADEIQSGLARSGRM---LA  114 (306)
Q Consensus        46 d~~~le~~i~~~~~~-------~~~v~v~~~~~~~G~~~~~~~~l~~i~~l-~~~~gi~li~De~~~g~~~~g~~---~~  114 (306)
                      +.+.++++|+++++.       .+++++..+. ..|...+    +++|.++ |+.++ .|++||+|.+.......   ++
T Consensus       261 ~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pT-YdG~~yd----i~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~~p  334 (720)
T PRK13578        261 DEEYLREQIREVAPERADEARPFRLAVIQLGT-YDGTIYN----ARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMADCS  334 (720)
T ss_pred             cHHHHHHHHHhcCccccccccCceEEEEECCC-Ccceeec----HHHHHHHhhccCC-cEEEeCcchhhhccCcccccCC
Confidence            467799999987322       3544443322 2577777    9999998 78888 99999999863222221   21


Q ss_pred             cccCCCCCc----EEEec--ccccCCcccceeeEeCHHHHh---------hcCCCC-ccCCCCCCHHHHHHHHHHHHHHh
Q 021893          115 SDWEEVRPD----MVILG--KALGGGVIPVSAVLADKEVML---------CIQPGE-HGSTFGGNPLASAVAIASLDVIR  178 (306)
Q Consensus       115 ~~~~~~~~d----~~s~s--K~~~~G~~~~g~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~aa~~al~~~~  178 (306)
                      .......+|    +++-|  |.+++-- ..+++..+...++         ++.... ...+.+++.+-+++...+.+++.
T Consensus       335 ~~al~~GaD~p~i~v~QStHKtL~alT-QaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qSTSPsY~LmASLDva~~~m~  413 (720)
T PRK13578        335 PLLLELNENDPGIFVTQSVHKQQAGFS-QTSQIHKKDNHIKGQARYCPHKRLNNAFMLHASTSPFYPLFAALDVNAKMHE  413 (720)
T ss_pred             hhhhhcCCCCCCeEEEEChhhcchhhh-hHhhhhcCCcccccccccCCHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHH
Confidence            122344666    77665  8776422 5555766443221         222211 12223334444444445455554


Q ss_pred             h---ccHHHHHHHHHHHHHHHHHHHHhhCCCc-------------------------eeeEE----E-----------ee
Q 021893          179 D---EKLAERSAHLGEELRQHLFKIQQQFPNY-------------------------VKEVR----G-----------RG  215 (306)
Q Consensus       179 ~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~-------------------------~~~~~----~-----------~g  215 (306)
                      .   ..+.+...+....+|+.+.+....+..+                         .....    +           .-
T Consensus       414 ~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP  493 (720)
T PRK13578        414 GESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVDP  493 (720)
T ss_pred             HhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccccccCccccccccccccccccCC
Confidence            3   3356666677777777763322111000                         00000    0           00


Q ss_pred             eEEEEEEecCC--------ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          216 LFNAVEFDKTA--------LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       216 ~~~~i~~~~~~--------~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .=+.+..+...        .+..+..+.+.|+++||.+.-.+...+-+.++...++++++.++++|.++-+
T Consensus       494 ~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~Lv~aL~~f~~  564 (720)
T PRK13578        494 CKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCDLNSILFLLTPAEDMAKLQQLVAMLARFEK  564 (720)
T ss_pred             ceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence            00112222100        1122678999999999999988888888888899999999999999987755

>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]

Probab=98.58  E-value=2.1e-06  Score=74.97  Aligned_cols=219  Identities=16%  Similarity=0.163  Sum_probs=122.2

Q ss_pred             CHHHHHHHHHhcC--Cc-EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccc-cccc-ccc----
Q 021893           46 DITALEKIFKESG--DQ-IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS-GRML-ASD----  116 (306)
Q Consensus        46 d~~~le~~i~~~~--~~-~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~-g~~~-~~~----  116 (306)
                      |.++|++.+++..  -+ .++++++|.+ +||. +.+++-+++|..+|.+++++|+.||+|-+..+. +..| ++.    
T Consensus       199 d~~el~~~~~eA~k~i~~r~lvvINPGN-PTGq-vls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~  276 (475)
T KOG0258|consen  199 DVAELERSVDEARKGINPRALVVINPGN-PTGQ-VLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLH  276 (475)
T ss_pred             CHHHHHHHHHHHhccCCceEEEEECCCC-ccch-hhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHH
Confidence            7899999998743  22 4555566655 5664 458999999999999999999999999863333 3222 221    


Q ss_pred             cCC-CCCc---EE---Eeccccc--CCcccceeeEe---CHHHHhhcCCCCccCCCCCCHHHHHH----------HHHHH
Q 021893          117 WEE-VRPD---MV---ILGKALG--GGVIPVSAVLA---DKEVMLCIQPGEHGSTFGGNPLASAV----------AIASL  174 (306)
Q Consensus       117 ~~~-~~~d---~~---s~sK~~~--~G~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a----------a~~al  174 (306)
                      +.+ -.++   .+   +.||++.  .|. |-||+-.   .++..+.+.+... ...+.+..+++.          +..+.
T Consensus       277 emg~~~~~~v~L~SfhSvSKGy~gECG~-RGGYmEv~n~~prv~~qi~Kl~s-i~lc~~V~GQ~~vdl~VnPP~Pgd~Sy  354 (475)
T KOG0258|consen  277 EMGNPYPDNVSLASFHSVSKGYMGECGQ-RGGYMESLNRDPRVKQQIKKLAS-IKLCPQVSGQKLVDLVVNPPKPGDPSY  354 (475)
T ss_pred             HhcCccCCceEEEeeecccccceeeecc-cCCeeecccCChhHHHHHHHHHh-hhhcCCccchhhhceecCCCCCCCcch
Confidence            111 1222   22   5689887  587 8887633   3554444432100 000111111111          01111


Q ss_pred             HHH--hhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE---EecCC------ChhhHH-HHHHHHHHC-
Q 021893          175 DVI--RDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE---FDKTA------LPVSAY-DICLKMKER-  241 (306)
Q Consensus       175 ~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~---~~~~~------~~~~~~-~~~~~l~~~-  241 (306)
                      +..  +.+.+.+.++.+++.+.+.++.+.     .+.--+..|.|+.+.   ++...      .+.... -.|..|++. 
T Consensus       355 ~~~~~Ekd~il~~l~~ra~l~~~~~ns~~-----gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~t  429 (475)
T KOG0258|consen  355 DLFSSEKDGILSSLRSRAKLTEDAFNSLE-----GISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEAT  429 (475)
T ss_pred             hhhhhhhHhHHHHHHHHhHHHHHHHhhcC-----ceeeccCccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhc
Confidence            111  235577778888888888888763     333334455555443   33211      000111 236777766 


Q ss_pred             CceeccC-------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          242 GILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       242 Gi~~~~~-------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ||.+.|+       +.-++|..   ..... + +.+++++++..
T Consensus       430 GIcvVPGSGFGQ~~GtyH~R~T---iLp~~-~-~~i~~~~~fH~  468 (475)
T KOG0258|consen  430 GICVVPGSGFGQKEGTYHFRTT---ILPPG-L-EIIEKFKKFHA  468 (475)
T ss_pred             CeEEecCCCCCCCCceeEEEEe---ecCch-h-HHHHHHHHHHH
Confidence            9999986       23467775   23333 4 67777776665

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=98.57  E-value=2.3e-06  Score=79.06  Aligned_cols=187  Identities=17%  Similarity=0.140  Sum_probs=111.6

Q ss_pred             CHHHHHHHHHhcCCcEEE--EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccc-cCCC-C
Q 021893           46 DITALEKIFKESGDQIAG--FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD-WEEV-R  121 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~--v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~-~~~~-~  121 (306)
                      |+++|+++|.++   +..  |+.......+|.+=+    +++|.++|+++|+++++|.+++|+...-...... .+++ .
T Consensus       194 d~~~l~~~i~~~---t~~g~vV~~aGtT~~G~iDd----i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~  266 (460)
T COG0076         194 DVDALEEAIDEN---TIGGVVVGTAGTTDTGSIDD----IEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEG  266 (460)
T ss_pred             CHHHHHHHHHhh---ccCceEEEEecCCCCCccCC----HHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCC
Confidence            799999999963   444  777777888888877    9999999999999999999999863211100001 1122 3


Q ss_pred             CcEEEec--ccccCCcccceeeEeCHH--HHhhcC--CCCcc----CCC----CCCHHHHHHHHHHHHHHhhccHHH---
Q 021893          122 PDMVILG--KALGGGVIPVSAVLADKE--VMLCIQ--PGEHG----STF----GGNPLASAVAIASLDVIRDEKLAE---  184 (306)
Q Consensus       122 ~d~~s~s--K~~~~G~~~~g~~~~~~~--~~~~~~--~~~~~----~~~----~~~~~~~~aa~~al~~~~~~~~~~---  184 (306)
                      .|-++++  |.+...+ ++|+++.+.+  +.+.+.  .....    ..+    +.+.-..+++.+.++.+..+++.+   
T Consensus       267 vdSIt~d~HK~g~aP~-~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~  345 (460)
T COG0076         267 VDSITVDGHKYGLAPI-GCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLD  345 (460)
T ss_pred             ceEEEECcccccCCCC-CceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHH
Confidence            3545444  8887777 8888888644  443332  11111    111    223335566667777776555444   


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec
Q 021893          185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK  246 (306)
Q Consensus       185 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~  246 (306)
                      +..++.+++.+.|++..    ............+.+.+++.. . ...+....+...|-.+.
T Consensus       346 ~~~~~a~~la~~l~~~~----~~e~~~~p~l~~V~fr~~~~~-~-~~~~~~~~~~~~gw~v~  401 (460)
T COG0076         346 RTLELARYLAEELEKLG----DFELVNEPELPIVAFRLKDDE-D-TLADLSERLDRRGWQVP  401 (460)
T ss_pred             HHHHHHHHHHHHHHhCC----CcEeecCCccceEEEEcCCcc-c-chhchHHHHHhcCceee
Confidence            44477777777777763    122233345555666664311 0 13445556655665544

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=98.48  E-value=4.3e-05  Score=67.95  Aligned_cols=218  Identities=19%  Similarity=0.163  Sum_probs=134.4

Q ss_pred             CCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEE--ehhhhcccccccccc
Q 021893           37 PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA--DEIQSGLARSGRMLA  114 (306)
Q Consensus        37 ~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~--De~~~g~~~~g~~~~  114 (306)
                      ..+...+++|.+.|++. .+  ..+.++++..++.-+....+    +++|.+.+|++|.++++  |-.--++     .  
T Consensus       190 ~~i~~~~~~d~~~l~~~-~~--~~~~gv~vQyP~~~G~~~~d----~~~l~~~~h~~~al~~v~aDplaL~L-----L--  255 (450)
T COG0403         190 IEIEVVDADDLDDLESA-DD--GDVFGVLVQYPNTFGIVEED----LRALIEAAHSAGALVIVAADPLALGL-----L--  255 (450)
T ss_pred             eEEEEeccchhhhhhhc-cc--cCeEEEEEecCCCCCccchh----HHHHHHHHhhcCCEEEEEechhHhhc-----c--
Confidence            34577778899999988 43  47999999988865545555    99999999999998874  3222221     1  


Q ss_pred             cccCCCCCcEEE-----eccccc-CCcccceeeEeCHHHHhhcCCCC----------------------------ccCCC
Q 021893          115 SDWEEVRPDMVI-----LGKALG-GGVIPVSAVLADKEVMLCIQPGE----------------------------HGSTF  160 (306)
Q Consensus       115 ~~~~~~~~d~~s-----~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~----------------------------~~~~~  160 (306)
                      -+.-++..|++.     |+=.++ ||. -+||+.++++++.++-...                            -.+..
T Consensus       256 ~pPGe~GADIvvG~~QrfGvPmgfGGP-hag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNI  334 (450)
T COG0403         256 KPPGEFGADIVVGSAQRFGVPMGFGGP-HAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNI  334 (450)
T ss_pred             CCccccCCceEEecCcccCCCcCCCCc-ceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhh
Confidence            111234566652     333444 788 8999999999876664321                            01111


Q ss_pred             CCCHH--HHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHH
Q 021893          161 GGNPL--ASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDIC  235 (306)
Q Consensus       161 ~~~~~--~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~  235 (306)
                      |.+..  +.+++. .+-++..   .++..++.++..++.++|++...-     ..+.....+-.+.+.-.  ......+.
T Consensus       335 CTnQaLlA~~As~-y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g-----~~~~~~~fFdt~~v~~~--~~~~~~l~  406 (450)
T COG0403         335 CTNQALLALAASM-YAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAG-----VELVFDHFFDTFTVRVP--EEVAEALL  406 (450)
T ss_pred             hHHHHHHHHHHHH-HHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCc-----eEeccccceeeEEEecc--hhHHHHHH
Confidence            22221  222222 2222333   335677778888888888865311     12222233333333310  13456677


Q ss_pred             HHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          236 LKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       236 ~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      +.....|+-++.-....+-+++.=.+++++|+.+++.+....
T Consensus       407 ~~~~~~G~~L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~~~  448 (450)
T COG0403         407 AAAIAGGINLRRVDADTVLIALTETTTKEDIDALVAAFGGVN  448 (450)
T ss_pred             HHHHhcCCceeeecCCceEEEeecccCHHHHHHHHHHHhhhc
Confidence            777888988887767678888777788999999999887543

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=98.39  E-value=2e-05  Score=78.01  Aligned_cols=204  Identities=14%  Similarity=0.117  Sum_probs=124.1

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |+++|++.+     +++++++..++ ..|.+-+    +++|.+++|++|.+++++.-...+   +..  .+.-++..|++
T Consensus       185 ~~~~l~~~~-----~~~~v~~q~Pn-~~G~ied----~~~i~~~~h~~gal~~~~ad~~al---~ll--~~Pge~GaDi~  249 (939)
T TIGR00461       185 DCSDIKKAV-----DVFGCLLQYPA-TDGSILD----YKQLIDALHSHKSLVSVAADLMAL---TLL--TPPGHYGADIV  249 (939)
T ss_pred             cHHHHhhcC-----CEEEEEEECCC-CCeEEec----HHHHHHHHHHcCCEEEEEechHHh---CCc--CCHHHcCCcEE
Confidence            455555444     36666665544 3566666    999999999999999986544311   111  12223456765


Q ss_pred             -Eeccccc-----CCcccceeeEeCHHHHhhcCCCC-----ccC---CC---------------CCCHH----HHHH--H
Q 021893          126 -ILGKALG-----GGVIPVSAVLADKEVMLCIQPGE-----HGS---TF---------------GGNPL----ASAV--A  170 (306)
Q Consensus       126 -s~sK~~~-----~G~~~~g~~~~~~~~~~~~~~~~-----~~~---~~---------------~~~~~----~~~a--a  170 (306)
                       ..+|.||     ||. -.|++.+++++...+-...     +..   .|               ..+.+    ++.+  +
T Consensus       250 vg~~q~fg~p~g~GGP-~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a  328 (939)
T TIGR00461       250 LGSSQRFGVPMGYGGP-HAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVA  328 (939)
T ss_pred             eeCCCccCCCCCCCCC-ceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHH
Confidence             3446665     577 7889999988776664320     000   00               11111    1111  1


Q ss_pred             HHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc
Q 021893          171 IASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP  247 (306)
Q Consensus       171 ~~al~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~  247 (306)
                      ...+..+..+   ++.+++..+..++.+.|++.+...   ...    ..+-.+.+.-.  ..++.++.+.+.++||.++.
T Consensus       329 ~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~---~~~----~fF~~~~v~~~--~~~~~~i~~~~~~~gi~l~~  399 (939)
T TIGR00461       329 SSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHEL---INK----TWFDTLTVKVG--NGISSELLKAAEEFNINLRA  399 (939)
T ss_pred             HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcc---cCC----CccceEEEEeC--CCCHHHHHHHHHHCCCeeee
Confidence            2123444443   346677778888888888854221   111    11212222210  13577899999999999987


Q ss_pred             CCCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893          248 THDTIVRLTPPLSISSNELQEGSKALH  274 (306)
Q Consensus       248 ~~~~~lRi~~~~~~t~~~i~~~~~~l~  274 (306)
                      ..++.+++++.-.+|++||+.+++.+.
T Consensus       400 ~~~~~i~~s~~E~~t~~di~~l~~~~~  426 (939)
T TIGR00461       400 VDTTTVGIALDETTTKADVENLLKVFD  426 (939)
T ss_pred             cCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence            767799999999999999999999885

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=98.36  E-value=1.2e-06  Score=76.19  Aligned_cols=101  Identities=21%  Similarity=0.098  Sum_probs=67.3

Q ss_pred             CHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcc--cccccccccccCCC
Q 021893           46 DITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL--ARSGRMLASDWEEV  120 (306)
Q Consensus        46 d~~~le~~i~~---~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~--~~~g~~~~~~~~~~  120 (306)
                      |+++|++.++.   |..++++|.++..++..|..+++.+.|++|.++|++||+.|++|.+.-..  ...+..  .....-
T Consensus       107 ~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~--~~e~~~  184 (290)
T PF01212_consen  107 TPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVS--LAEIAA  184 (290)
T ss_dssp             -HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHH--HHHHHT
T ss_pred             CHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhccccc--HHHHhh
Confidence            79999999998   44679999999999987667889999999999999999999999986421  011111  111113


Q ss_pred             CCcEE--EecccccCCcccce-eeEeCHHHHhhc
Q 021893          121 RPDMV--ILGKALGGGVIPVS-AVLADKEVMLCI  151 (306)
Q Consensus       121 ~~d~~--s~sK~~~~G~~~~g-~~~~~~~~~~~~  151 (306)
                      ..|.+  +++|.++  . +.| .+++++++++..
T Consensus       185 ~~D~v~~~~tK~~g--~-~~Gavl~~~~~~i~~~  215 (290)
T PF01212_consen  185 GADSVSFGGTKNGG--A-PGGAVLAGNKEFIAKA  215 (290)
T ss_dssp             TSSEEEEETTSTT---S-SSEEEEEESHHHHHHH
T ss_pred             hCCEEEEEEEcccc--c-ccceEEEechHHHHHH
Confidence            45666  4557655  2 444 477788866543

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=98.29  E-value=1.1e-05  Score=71.54  Aligned_cols=124  Identities=17%  Similarity=0.181  Sum_probs=87.5

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEcc--ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCC
Q 021893           45 GDITALEKIFKESGDQIAGFLFEP--IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRP  122 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~--~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~  122 (306)
                      ....+++.+|.+   ++++++-..  +...++.. .    ++++.++|++||+++++|.+-+...+. .+-..+.....+
T Consensus       144 t~~~d~~~AIne---~ta~llkV~s~~~~f~~~l-~----~~~l~~ia~~~~lpvivD~aSg~~v~~-e~~l~~~la~Ga  214 (395)
T COG1921         144 THLKDYELAINE---NTALLLKVHSSNYGFTGML-S----EEELVEIAHEKGLPVIVDLASGALVDK-EPDLREALALGA  214 (395)
T ss_pred             CCHHHHHHHhcc---CCeeEEEEeeccccccccc-c----HHHHHHHHHHcCCCEEEecCCcccccc-ccchhHHHhcCC
Confidence            368999999995   565555333  33344543 4    889999999999999999887543221 111123345678


Q ss_pred             cEEEec--ccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh
Q 021893          123 DMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD  179 (306)
Q Consensus       123 d~~s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~  179 (306)
                      |+++||  |-++ |. +.|++++++++++.++.......+....+.+++..++++.+..
T Consensus       215 DLV~~SgdKllg-GP-qaGii~GkKelI~~lq~~~l~Ralrv~K~tla~l~~aLe~y~~  271 (395)
T COG1921         215 DLVSFSGDKLLG-GP-QAGIIVGKKELIEKLQSHPLKRALRVDKETLAALEAALELYLQ  271 (395)
T ss_pred             CEEEEecchhcC-CC-ccceEechHHHHHHHHhhhhhhhhhcCcHhHHHHHHHHHHHcC
Confidence            999998  7665 44 6778999999999888755555555677888888888888866

>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]

Probab=98.26  E-value=2.8e-05  Score=66.28  Aligned_cols=217  Identities=15%  Similarity=0.238  Sum_probs=127.4

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-----
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-----  120 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-----  120 (306)
                      |++.+-..|+..++....++.-..+|+|| +-|++|.+.+|.++.++.+.+-+.|-+|-|| ..|.+- .+.|.+     
T Consensus       164 d~e~~Lsdl~~APe~si~iLhaCAhNPTG-mDPT~EQW~qia~vik~k~lf~fFDiAYQGf-ASGD~~-~DawAiR~fV~  240 (410)
T KOG1412|consen  164 DLEGFLSDLESAPEGSIIILHACAHNPTG-MDPTREQWKQIADVIKSKNLFPFFDIAYQGF-ASGDLD-ADAWAIRYFVE  240 (410)
T ss_pred             cHHHHHHHHhhCCCCcEEeeeccccCCCC-CCCCHHHHHHHHHHHHhcCceeeeehhhccc-ccCCcc-ccHHHHHHHHh
Confidence            67777777776655555566666799998 5689999999999999999999999999988 233321 222211     


Q ss_pred             -CCc-EE--Eeccccc-CCcccceeeE--e-CHHHHhhcCCC---CccCCCCCCHHH--HHHHHHHHHHHh-------h-
Q 021893          121 -RPD-MV--ILGKALG-GGVIPVSAVL--A-DKEVMLCIQPG---EHGSTFGGNPLA--SAVAIASLDVIR-------D-  179 (306)
Q Consensus       121 -~~d-~~--s~sK~~~-~G~~~~g~~~--~-~~~~~~~~~~~---~~~~~~~~~~~~--~~aa~~al~~~~-------~-  179 (306)
                       ... ++  ||+|-+| -+- |+|.+.  . ++..+..+...   ..-.+++ ||++  +-.....|+.-.       + 
T Consensus       241 ~g~e~fv~QSFaKNfGlYne-RvGnltvv~~n~a~i~~v~SQl~lviR~~~S-NPPAyGArIV~kvL~tP~lre~W~~si  318 (410)
T KOG1412|consen  241 QGFELFVCQSFAKNFGLYNE-RVGNLTVVVNNPAVIAGVKSQLTLVIRSNWS-NPPAYGARIVHKVLSTPELREQWIQSI  318 (410)
T ss_pred             cCCeEEEEhhhhhhcccccc-cccceEEEecChhHHHHHHHHHHHHHhhccC-CCcchhhHHHHHHhcCHHHHHHHHHHH
Confidence             122 22  7889998 465 777432  3 44444333321   1112222 2332  222222222111       0 


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccCCCCEEEEeCC
Q 021893          180 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPTHDTIVRLTPP  258 (306)
Q Consensus       180 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~~~lRi~~~  258 (306)
                      .....++.+.+..|++.|.++.-. +.|-..+...|++..--+       .+ .-.+.|.++ .|++.+  .|.+-++  
T Consensus       319 k~MssRI~~MR~aLrd~L~aL~TP-GtWDHI~~QiGMFSyTGL-------tp-~qV~~li~~h~vyLl~--~GRInis--  385 (410)
T KOG1412|consen  319 KTMSSRIKKMRTALRDHLVALKTP-GTWDHITQQIGMFSYTGL-------TP-AQVDHLIENHKVYLLS--DGRINIS--  385 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCC-CcHHHHHhhccceeecCC-------CH-HHHHHHHHhceEEEec--CCcEeee--
Confidence            123456666677777777776422 124445566666543222       22 345666655 777766  3444444  


Q ss_pred             CCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          259 LSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       259 ~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                       ..+...+++...+|.++.+ .+.
T Consensus       386 -GLN~~NveyVAkAIde~Vr-~~~  407 (410)
T KOG1412|consen  386 -GLNMKNVEYVAKAIDETVR-AIK  407 (410)
T ss_pred             -ccccccHHHHHHHHHHHHH-hhc
Confidence             4566778999999988887 543

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=98.25  E-value=6e-05  Score=68.46  Aligned_cols=196  Identities=17%  Similarity=0.157  Sum_probs=101.3

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE-Eeccccc-----
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV-ILGKALG-----  132 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~-s~sK~~~-----  132 (306)
                      +++++|++..++.- |.+-+    +++|.+++|++|.++++ .+-  .-.-+...  ..-++..|++ ..+|.||     
T Consensus       196 ~~~a~v~vq~Pn~~-G~~ed----~~~i~~~~h~~gal~~~-~ad--~~aL~~l~--~Pge~GADI~vg~~Q~fg~p~~~  265 (429)
T PF02347_consen  196 DDTAAVMVQNPNTF-GVFED----IKEIADIAHAAGALVIV-GAD--PNALGGLK--SPGEYGADIVVGEHQTFGIPMGF  265 (429)
T ss_dssp             TTEEEEEEESS-TT-SB--T----HHHHHHHHHHTT-EEEE-CGG--CCGCCTC----GGGGT-SEEEECCTTTT---CC
T ss_pred             cCeEEEEeecCCCC-ceEee----HHHHHHHHHHcCCEEEE-ecC--HHHHhCcC--ChhhcCccEEeeCCCCCcccCCC
Confidence            68999999888754 54544    99999999999999986 332  11111111  1112356766 3458776     


Q ss_pred             CCcccceeeEeCHHHHhhcCCC----------------------------CccCCCCCC-HHHHHHHHHHHHHHhhc---
Q 021893          133 GGVIPVSAVLADKEVMLCIQPG----------------------------EHGSTFGGN-PLASAVAIASLDVIRDE---  180 (306)
Q Consensus       133 ~G~~~~g~~~~~~~~~~~~~~~----------------------------~~~~~~~~~-~~~~~aa~~al~~~~~~---  180 (306)
                      ||. .+|++.++++++..+-..                            .-....+.| .+...++...+..+..+   
T Consensus       266 GGP-~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~  344 (429)
T PF02347_consen  266 GGP-GAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLR  344 (429)
T ss_dssp             C-S---EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC-CeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHH
Confidence            788 899999999887666422                            001112222 33333444445555543   


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCC
Q 021893          181 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLS  260 (306)
Q Consensus       181 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~  260 (306)
                      ++.++...+..+++++|++.. .   ..  ....-.+=.+.... . .....++.+.+...|+.......+.+-+++.=.
T Consensus       345 ~iA~~~~~~A~yl~~~L~~~~-~---~~--~~~~~f~e~v~~~~-~-~~~~~~l~~~~~~~gl~~~~~~~~~~li~~TE~  416 (429)
T PF02347_consen  345 EIAERIHLNAHYLAERLKKIY-G---LP--FDNPFFFEFVVVFS-K-DKEVEELLKRGIEGGLNLRYPDDGALLICVTET  416 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHCCTT-B---EC--SSSSSBSSEEEEES-S--HHHHHHHHTT----EEEGGG-SSEEEEE--TT
T ss_pred             HHHHHHHHHHHHHHHHHHHhc-C---cc--cCCCCceeeeeecC-C-cHHHHHHHHHHHhcCCCccccCCCeEEEEccCC
Confidence            356677788888888888761 1   11  11111111222221 1 133344666666678666655566999998888


Q ss_pred             CCHHHHHHHHHHH
Q 021893          261 ISSNELQEGSKAL  273 (306)
Q Consensus       261 ~t~~~i~~~~~~l  273 (306)
                      .|++||+.+++.|
T Consensus       417 ~t~edid~lv~~f  429 (429)
T PF02347_consen  417 RTKEDIDRLVEAF  429 (429)
T ss_dssp             --HHHHHHHHH--
T ss_pred             CCHHHHHHHHhcC
Confidence            9999999999865

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=98.22  E-value=0.00014  Score=67.55  Aligned_cols=218  Identities=14%  Similarity=0.111  Sum_probs=114.3

Q ss_pred             CHHHHHHHHHhcCCc-EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc-ccccccccccccCCCCCc
Q 021893           46 DITALEKIFKESGDQ-IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG-LARSGRMLASDWEEVRPD  123 (306)
Q Consensus        46 d~~~le~~i~~~~~~-~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g-~~~~g~~~~~~~~~~~~d  123 (306)
                      +.+.+++.+.+++.. ..+++.+|.+  .|....    +++|.+.++.+++++.+||++.- ++..+... -.......|
T Consensus       152 ~~~~~~~~l~~~~~~~k~~vitnpTY--dGv~~n----~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~-~~~~~~~~~  224 (557)
T COG1982         152 PLETFKEALLAHPDAEKLAVITNPTY--DGVCYN----LRKIVELLHHYGAWVLYDEAHPAHFDFSPMLP-ESALNGGAD  224 (557)
T ss_pred             CHHHHHHHHHhChhhheeEEEecCcc--ceEeec----HHHHHHHHhhcCceEEhhhcCcccccccccCc-chhhhcCce
Confidence            789999999988655 5666665554  577888    99999999999999999999972 22222221 122224457


Q ss_pred             EEEec--ccccCCcccceeeEeCHH--H-HhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccH----HHHHHHHHH
Q 021893          124 MVILG--KALGGGVIPVSAVLADKE--V-MLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKL----AERSAHLGE  191 (306)
Q Consensus       124 ~~s~s--K~~~~G~~~~g~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~----~~~~~~~~~  191 (306)
                      +++-|  |.+++.- ..+++..+..  + .+++.......+.+.+.-.+.|++.+-+.+..   ..+    .+..-+.++
T Consensus       225 ~~tqS~HK~l~alS-QaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~  303 (557)
T COG1982         225 FVTQSTHKLLAALS-QASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLMASLDVARMQEGNAGRELWQEVIDEAIDFRK  303 (557)
T ss_pred             EEEechhhhhhhhh-hhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence            77666  7776544 5666766531  0 01111111112222222333333333333322   112    233333444


Q ss_pred             HHHHHHHHHHhhCCCceeeE--EEee----------------eEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEE
Q 021893          192 ELRQHLFKIQQQFPNYVKEV--RGRG----------------LFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIV  253 (306)
Q Consensus       192 ~l~~~L~~~~~~~~~~~~~~--~~~g----------------~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~l  253 (306)
                      .+++..+... .++.+....  ...+                .=+.+..++  .+..+..+.++|+++|++..-.+...+
T Consensus       304 ~~~~~~~~~~-~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~--~Gipg~~v~~~L~e~gii~e~~~d~~~  380 (557)
T COG1982         304 ALRRLINEIG-FFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPE--FGIPGAIVAKYLREHGIIPEETGDYSN  380 (557)
T ss_pred             HHHHHHHhcC-CeeeccccccCCcccccccccccccceeccccEEEEecCC--CCCcHHHHHHHHHHcCCeeeecCCcee
Confidence            4444444332 110000000  0001                111222222  456788999999999999887765544


Q ss_pred             EEeCC-C-CCCHHHHHHHHHHHH
Q 021893          254 RLTPP-L-SISSNELQEGSKALH  274 (306)
Q Consensus       254 Ri~~~-~-~~t~~~i~~~~~~l~  274 (306)
                      -+.+. . ..+..+++.+++.++
T Consensus       381 lll~~~~~gk~~~lv~~L~~f~r  403 (557)
T COG1982         381 LLLFSPGIGKWQTLVDRLLEFKR  403 (557)
T ss_pred             eEEeeeccchHHHHHHHHHHHHH
Confidence            44332 2 344555666655554

>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]

Probab=98.19  E-value=2.5e-05  Score=69.26  Aligned_cols=226  Identities=16%  Similarity=0.097  Sum_probs=124.7

Q ss_pred             CHHHHHHHHHhcCCc---EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893           46 DITALEKIFKESGDQ---IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R  121 (306)
Q Consensus        46 d~~~le~~i~~~~~~---~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~  121 (306)
                      ++++||+.|-+.+.+   +..|-++......|..-+    |+.|+++|.+|++++.+|.+.+|---..........++ .
T Consensus       236 ~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd----L~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Gier  311 (510)
T KOG0629|consen  236 IPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD----LNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIER  311 (510)
T ss_pred             chHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc----HHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccc
Confidence            589999999976444   566666666666676666    99999999999999999999985101111111112233 2


Q ss_pred             CcEEEec--ccccCCcccceeeEeCHH-HHhhcCCCCccCCC-----------CCCH-------HHHHHHHHHHHHHhhc
Q 021893          122 PDMVILG--KALGGGVIPVSAVLADKE-VMLCIQPGEHGSTF-----------GGNP-------LASAVAIASLDVIRDE  180 (306)
Q Consensus       122 ~d~~s~s--K~~~~G~~~~g~~~~~~~-~~~~~~~~~~~~~~-----------~~~~-------~~~~aa~~al~~~~~~  180 (306)
                      .+-++.+  |-+|..+ +++.++.+++ +++++.+.....-|           +++-       .-+.-.+--++.-...
T Consensus       312 a~SvtwnpHK~~gapl-qCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~  390 (510)
T KOG0629|consen  312 ANSVTWNPHKLMGAPL-QCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQ  390 (510)
T ss_pred             cCceeecHHHhhcCcc-hhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccc
Confidence            3445554  8888888 8887777644 55555432111111           0100       0111011111111122


Q ss_pred             c---HHHHHHHHHHHHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecC-C---C-h-------hhHHHHHHHHHHCCc-
Q 021893          181 K---LAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKT-A---L-P-------VSAYDICLKMKERGI-  243 (306)
Q Consensus       181 ~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~-~---~-~-------~~~~~~~~~l~~~Gi-  243 (306)
                      +   -.++.-++++++.++|++.....  .+... +..-.+..+..++. .   . .       ..+..+-..+.++|. 
T Consensus       391 Gfe~~v~k~~~lA~yl~~~lrer~~~~--~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~  468 (510)
T KOG0629|consen  391 GFEAQVDKCLRLAEYLYDRLREREGFE--MLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMMKKGTT  468 (510)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhcccce--ehhcCCCceEEEeeccCchHhccCcccchhhhHHHhhCcHHHHHHHhccce
Confidence            2   35566678888888888875432  22222 22222222222221 0   0 0       112234566677763 


Q ss_pred             --eeccC--CCCEEEEeCC-CCCCHHHHHHHHHHHHHHHh
Q 021893          244 --LAKPT--HDTIVRLTPP-LSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       244 --~~~~~--~~~~lRi~~~-~~~t~~~i~~~~~~l~~~l~  278 (306)
                        -..|.  .++++|+..+ ...+.+|++.+++.|.+.-+
T Consensus       469 Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq  508 (510)
T KOG0629|consen  469 MIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQ  508 (510)
T ss_pred             eeEecccccccchhheecccchhhhhhHHHHHHHHHHhcc
Confidence              33453  4678898763 35688999999998876543

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=98.16  E-value=1.1e-05  Score=69.91  Aligned_cols=197  Identities=15%  Similarity=0.077  Sum_probs=106.8

Q ss_pred             cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccc
Q 021893           60 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPV  138 (306)
Q Consensus        60 ~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~  138 (306)
                      ..-.=+|..+||+.|.+      .+.   +++.-+.-+|.|-+|=.  ..-.+... ....+.-++|+||.=| +|- |+
T Consensus       137 ~~~IElVTSPNNPDG~l------r~~---V~~g~~~k~I~D~AYYW--PhyTpI~~-~aD~DiMLFT~SK~TGHAGS-R~  203 (363)
T PF04864_consen  137 SPYIELVTSPNNPDGQL------REA---VLNGSSGKVIHDLAYYW--PHYTPITA-PADHDIMLFTLSKLTGHAGS-RF  203 (363)
T ss_dssp             CGEEEEEESS-TTT---------------SSTTTEEEEEEE-TT-S--TTTS---S--B--SEEEEEHHHHCS-GGG--E
T ss_pred             CCeEEEEeCCCCCcccc------cch---hcCCCCcceeeeeeeec--ccccccCC-CCCCceEEEEEecccCcccc-cc
Confidence            34555666677777754      222   23455566799988842  11122211 1112233458899888 898 99


Q ss_pred             eeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--------ccHHHHHHHHHHHHHHHHHHHHhhCC----
Q 021893          139 SAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--------EKLAERSAHLGEELRQHLFKIQQQFP----  205 (306)
Q Consensus       139 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--------~~~~~~~~~~~~~l~~~L~~~~~~~~----  205 (306)
                      ||.+++ +++.+++......++...+--.+.-++..|+.+.+        .++.+.-.+.-+...++|++......    
T Consensus       204 GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSL  283 (363)
T PF04864_consen  204 GWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSL  283 (363)
T ss_dssp             EEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE
T ss_pred             ceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceec
Confidence            998886 66777776544445554444555555555555432        13555555555555556666543221    


Q ss_pred             ----C----ce-eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----CCCEEEEeCCCCCCHHHHHHHHH
Q 021893          206 ----N----YV-KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-----HDTIVRLTPPLSISSNELQEGSK  271 (306)
Q Consensus       206 ----~----~~-~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~~lRi~~~~~~t~~~i~~~~~  271 (306)
                          +    .. ........+.|+.+..    ....+-...|++.||..+.+     +..++|++  ...++++.+.+++
T Consensus       284 q~~~~~yC~ff~~~~~psPafAWlkCe~----eed~DC~~~l~~~~I~tr~G~~fga~~ryVRlS--ml~~~d~Fd~l~~  357 (363)
T PF04864_consen  284 QKFSPQYCNFFKRVREPSPAFAWLKCER----EEDEDCYAVLREAKIITRSGVLFGADSRYVRLS--MLKRDDDFDQLLE  357 (363)
T ss_dssp             ---SCEEETTTTCEEE---SEEEEEESS----CGGSSHHHHHHCTTEEEEEGGGGTS-TTEEEEE--SSS-HHHHHHHHH
T ss_pred             CcCCchhccccccccCCCCCeEEEecCC----cccccHHHHHHhCCcccCCCCccCCCCCeEEEe--ccCCHHHHHHHHH
Confidence                0    00 1222345666777663    12245566777889888754     57899999  7789999999999


Q ss_pred             HHHH
Q 021893          272 ALHD  275 (306)
Q Consensus       272 ~l~~  275 (306)
                      +|.+
T Consensus       358 rL~~  361 (363)
T PF04864_consen  358 RLSK  361 (363)
T ss_dssp             HHHC
T ss_pred             HHHh
Confidence            9874

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=98.10  E-value=9.8e-05  Score=66.84  Aligned_cols=150  Identities=25%  Similarity=0.268  Sum_probs=84.4

Q ss_pred             CHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893           46 DITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R  121 (306)
Q Consensus        46 d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~  121 (306)
                      |+++|+++|++.   +..+.+|+.+.....+|.+=+    +++|.++|+++++++.+|.+++|....-..+..-..++ .
T Consensus       177 d~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~----l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~  252 (373)
T PF00282_consen  177 DIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP----LEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIER  252 (373)
T ss_dssp             -HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S----HHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGG
T ss_pred             hHHHhhhhhcccccccccceeeeccCCCcccccccC----HHHHhhhccccceeeeeccccccccccccccccccccccc
Confidence            789999998853   223456777777888888876    99999999999999999999997321111111111122 2


Q ss_pred             CcEEEec--ccccCCcccceeeEeCHH-HHh-hcC---CCCc-----------c--CCCCCC-HHHHHHHHHHHHHHhhc
Q 021893          122 PDMVILG--KALGGGVIPVSAVLADKE-VML-CIQ---PGEH-----------G--STFGGN-PLASAVAIASLDVIRDE  180 (306)
Q Consensus       122 ~d~~s~s--K~~~~G~~~~g~~~~~~~-~~~-~~~---~~~~-----------~--~~~~~~-~~~~~aa~~al~~~~~~  180 (306)
                      .|-++++  |.++..+ ++|+++.+.+ ... .+.   ....           .  .+...+ ......+..+++.+..+
T Consensus       253 adSit~d~HK~l~~P~-~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~  331 (373)
T PF00282_consen  253 ADSITIDPHKWLGVPY-GCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGRE  331 (373)
T ss_dssp             ESEEEEETTTTTS-SS-S-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHH
T ss_pred             ccccccchhhhhcCCc-cceeEEeecccchHHHhccChhhhcccccccccccccccccccccccchHHHHHHHHHhcCHH
Confidence            3555444  9999888 8998887643 332 221   1100           0  011112 34445566777777666


Q ss_pred             cHHHHHH---HHHHHHHHHHHHH
Q 021893          181 KLAERSA---HLGEELRQHLFKI  200 (306)
Q Consensus       181 ~~~~~~~---~~~~~l~~~L~~~  200 (306)
                      ++.++++   ++.+++++.|++.
T Consensus       332 G~~~~i~~~~~~a~~l~~~l~~~  354 (373)
T PF00282_consen  332 GYRERIRRCIELARYLADRLRKD  354 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhC
Confidence            6555544   4444444444443

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=98.09  E-value=6e-06  Score=72.70  Aligned_cols=127  Identities=19%  Similarity=0.239  Sum_probs=57.2

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCC--CCcccCChhHHHHHHHHHHHcCCEEEEehhhhcc------ccccccccccc
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGE--AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL------ARSGRMLASDW  117 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~--~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~------~~~g~~~~~~~  117 (306)
                      .+++.|++|.   ++|++++--+.+|.  .|..  ..--++++.+++++|++++++|-.-+.+      +-.+.+-..+.
T Consensus       125 ~~~Dye~AI~---e~Ta~ll~Vh~Sn~~i~GFt--~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~  199 (367)
T PF03841_consen  125 HLSDYEKAIT---ENTAALLKVHTSNFRIQGFT--GEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEY  199 (367)
T ss_dssp             -----------------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------C
T ss_pred             cccccccccc---cccccccccccccccccccc--ccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHH
Confidence            4778899998   57888875553332  2211  2223999999999999999999776422      11222221233


Q ss_pred             CCCCCcEEEec--ccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh
Q 021893          118 EEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD  179 (306)
Q Consensus       118 ~~~~~d~~s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~  179 (306)
                      ....+|+++||  |-+|| . ..|+++++++++++++.......+...-+.+++..++++.+.+
T Consensus       200 ~~~GaDlV~fSGdKlLGG-P-QaGiI~Gkk~lI~~lk~~pl~RalrvdK~tla~L~atL~~Y~~  261 (367)
T PF03841_consen  200 LAAGADLVTFSGDKLLGG-P-QAGIIVGKKELIEKLKKHPLGRALRVDKLTLAALEATLRLYLD  261 (367)
T ss_dssp             CCCT-SEEEEETTSSSSS---S-EEEEEEHHHHHHHHHHHHTTT-B--HHHHHHHHHHHHH---
T ss_pred             hhcCCCEEEEECCCcCCC-C-CeEEEEeCHHHHHHHhhCCCcceEeeCHHHHHHHHHHHHHHHH
Confidence            45678999999  76654 5 6788999999999998655555556677888888888887753

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]

Probab=98.03  E-value=0.0013  Score=59.25  Aligned_cols=226  Identities=15%  Similarity=0.170  Sum_probs=131.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHH-cCCEEEEehhhhccccc-ccccccccCCC-CC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK-YNILMIADEIQSGLARS-GRMLASDWEEV-RP  122 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~-~gi~li~De~~~g~~~~-g~~~~~~~~~~-~~  122 (306)
                      |+..+.+.++   ++|.+++.+-++.++|.+-+    .++|.++..+ +++++.+|.+-+||..+ +.. ....|++ .|
T Consensus       207 D~~k~~~~i~---eNti~lv~~~~~~p~G~~e~----ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~-~~~~fdFr~p  278 (491)
T KOG1383|consen  207 DPGKVVRMID---ENTIMLVGSLPNFPTGEIED----VEKLADLLLEIWDIPIHVDACLGGFINPAGYL-NEEEFDFRVP  278 (491)
T ss_pred             cHHHHHHHhc---cceEEEEEEcCCCCccchhh----HHHHHHHHHHHhCCceeecccCcccccccccc-CccccccCCC
Confidence            6777777777   67999999999999997766    9999999999 99999999999998544 221 1234443 23


Q ss_pred             cEEEec----cccc-CCcccceeeEeC-HHH-HhhcCC--C-----CccCCCCC--CHHHHHHHHHHHHHHhhccHH---
Q 021893          123 DMVILG----KALG-GGVIPVSAVLAD-KEV-MLCIQP--G-----EHGSTFGG--NPLASAVAIASLDVIRDEKLA---  183 (306)
Q Consensus       123 d~~s~s----K~~~-~G~~~~g~~~~~-~~~-~~~~~~--~-----~~~~~~~~--~~~~~~aa~~al~~~~~~~~~---  183 (306)
                      -+.|.|    | +| .-- +++|++.+ +++ .+++.-  .     ..+-|..+  .....+++.+++--+..+++.   
T Consensus       279 ~V~Sisa~~HK-YGl~~~-G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~  356 (491)
T KOG1383|consen  279 GVTSISADGHK-YGLAPA-GSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENT  356 (491)
T ss_pred             CceeEeeccce-eeeeec-CcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHH
Confidence            333333    3 22 111 34556543 333 233321  1     11111122  233455556666555555554   


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-CCCEEEEeCCCCCC
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-HDTIVRLTPPLSIS  262 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-~~~~lRi~~~~~~t  262 (306)
                      +++.+..+.+++.+++..     .+..+.. .. +.+.+... ...+..++...|.+.|-.+-.- .+..+.++....+.
T Consensus       357 ~~ive~~~~l~egie~i~-----~i~i~gk-p~-vs~~~~~s-~~~~i~elsd~l~~~GW~lnalq~P~a~Hi~vt~~~~  428 (491)
T KOG1383|consen  357 QNIVETARKLREGIENIK-----GIKIVGK-PL-VSFILFGS-NDVNIFELSDLLRKKGWILNALQFPAAIHICVTRVHA  428 (491)
T ss_pred             HHHHHHHHHHHHhhhccc-----cceecCC-Cc-EEEEEccC-CccchhhhhHHHHhcCcCccccCCCCceEEEEEeeec
Confidence            455566667777777743     2222221 22 23323221 1355668899999998555421 12245555544444


Q ss_pred             HH-HHHHHHHHHHHHHhhhcCCCCCCCCC
Q 021893          263 SN-ELQEGSKALHDVLELDLPKMRKPKPA  290 (306)
Q Consensus       263 ~~-~i~~~~~~l~~~l~~~~~~~~~~~~~  290 (306)
                      .+ -.++++.-|+++++ ++...+.....
T Consensus       429 ~~~~A~~~v~Di~~~~~-el~~~p~~~~~  456 (491)
T KOG1383|consen  429 REDVADRFVADIRKVVE-ELKSLPESKTH  456 (491)
T ss_pred             cHHHHHHHHHHHHHHHH-HHHhCCCcccC
Confidence            44 47889999999999 88776655443

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=97.87  E-value=0.00015  Score=63.60  Aligned_cols=99  Identities=18%  Similarity=0.249  Sum_probs=67.9

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHH--cCCEEEEehhhhcccccccccccccCCCCCc
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK--YNILMIADEIQSGLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~--~gi~li~De~~~g~~~~g~~~~~~~~~~~~d  123 (306)
                      |.+.+++.++   +++++|++.---...-....+-+.++++.+.+|+  -++++++|++|+.|...     .+...+..|
T Consensus       143 D~~~i~~~~~---~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~-----~EP~~vGAD  214 (403)
T PF06838_consen  143 DWEAIKKALK---PNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVET-----QEPTEVGAD  214 (403)
T ss_dssp             -HHHHHHHHH---TTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSS-----S-GGGGT-S
T ss_pred             CHHHHHHhhc---cCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccc-----cCccccchh
Confidence            7999999999   6899999976554444445566778888888876  46899999999877322     223345677


Q ss_pred             EE--EecccccCCcccce-eeEeCHHHHhhcC
Q 021893          124 MV--ILGKALGGGVIPVS-AVLADKEVMLCIQ  152 (306)
Q Consensus       124 ~~--s~sK~~~~G~~~~g-~~~~~~~~~~~~~  152 (306)
                      ++  |+-|-.|||+++.| |+++++++++.+.
T Consensus       215 l~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a  246 (403)
T PF06838_consen  215 LMAGSLIKNPGGGIAPTGGYIAGRKDLVERAA  246 (403)
T ss_dssp             EEEEETTSGGGTTT-SS-EEEEESHHHHHHHH
T ss_pred             heeccceeCCCCCccCcCCEEechHHHHHHHH
Confidence            66  77799999998888 8999999998653

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]

Probab=97.84  E-value=0.0025  Score=57.43  Aligned_cols=223  Identities=15%  Similarity=0.090  Sum_probs=117.9

Q ss_pred             CHHHHHHHHHhcCC-cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC-----C
Q 021893           46 DITALEKIFKESGD-QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE-----E  119 (306)
Q Consensus        46 d~~~le~~i~~~~~-~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~-----~  119 (306)
                      +.+.|+++|++.-. -..-+++....+.|+.-  .-+.|.+|..+|+++|++|.+|.+|+|-     .+.++++     |
T Consensus       218 r~~~L~~AIe~D~arGlIPf~v~at~GTT~~c--a~D~l~elg~Vc~~~glWLHVDAAYAGs-----a~iCpE~r~l~rG  290 (511)
T KOG0628|consen  218 RGDTLRKAIEEDIARGLIPFFVCATLGTTSSC--AFDELEELGPVCREEGLWLHVDAAYAGS-----AFICPEFRYLMRG  290 (511)
T ss_pred             CHHHHHHHHHHHHhCCCccEEEEEeecCcccc--ccccHHHhcchhhhcCEEEEeehhhccc-----cccCHHHHHHhhc
Confidence            57899999986321 12223344444445432  4556999999999999999999999852     1112211     1


Q ss_pred             C-CCcEE--Eeccccc-----------CCcccce-eeEeCHHHHhhcCC-----CCccCCCCCCHHHHHHHHHHHHHHhh
Q 021893          120 V-RPDMV--ILGKALG-----------GGVIPVS-AVLADKEVMLCIQP-----GEHGSTFGGNPLASAVAIASLDVIRD  179 (306)
Q Consensus       120 ~-~~d~~--s~sK~~~-----------~G~~~~g-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~aa~~al~~~~~  179 (306)
                      + ..|-+  -.+|.+-           .|. .+. +..+++.-.+.-..     ..+.+.-.+-.+-..=.+-.++.+..
T Consensus       291 ie~aDSfn~n~hK~~~vnfDCs~lWvkd~~-~~~~~~~vdp~yL~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gv  369 (511)
T KOG0628|consen  291 IEYADSFNFNPHKWLLVNFDCSPLWVKDGT-KLSRAFNVDPLYLKHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGV  369 (511)
T ss_pred             chhhccccCChhheeEEeeeeecceeecCc-eeeeeeecChHhhcchhhccCCCccccccccccchhhHHHHHHHHHHhH
Confidence            1 01111  1223332           222 222 12222222211111     11111111222222233344555555


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhCC-CceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCC-ceeccC---CCCEEE
Q 021893          180 EKLAERSAHLGEELRQHLFKIQQQFP-NYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG-ILAKPT---HDTIVR  254 (306)
Q Consensus       180 ~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~G-i~~~~~---~~~~lR  254 (306)
                      +++++++++..+.. +..+.+...-+ ..+...+..|+++ |.+...  +...+++.+++.+.| |.+.|.   +.-.||
T Consensus       370 e~lq~~iR~h~~La-~~fe~lv~~d~~FE~~~~~~lgLvc-FRlk~~--N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlR  445 (511)
T KOG0628|consen  370 ENLQNYIREHVRLA-KEFETLVRADPRFEIVNKRILGLVC-FRLKGD--NEINEALLNRLNSSGRIHLVPASLHGKFVLR  445 (511)
T ss_pred             HHHHHHHHHHHHHH-HHHHHHhhcCCcceeecccccceeE-EeecCC--cHHHHHHHHHHHhcCcEEEEEeeecceEEEE
Confidence            76777776655444 44555443221 1122334455543 334432  456778888888775 666664   456799


Q ss_pred             EeCC-CCCCHHHHHHHHHHHHHHHhhhc
Q 021893          255 LTPP-LSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       255 i~~~-~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ++.. ..++.+|++++.+.|.+... .+
T Consensus       446 f~V~s~~t~~~di~~a~~~I~~~a~-~l  472 (511)
T KOG0628|consen  446 FAVCSPLTNESDIDEAWKIIFEAAD-EL  472 (511)
T ss_pred             EEecCCCCcHHHHHHHHHHHHHHHH-HH
Confidence            9974 34577899999999988887 64

>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=97.65  E-value=0.0023  Score=56.03  Aligned_cols=212  Identities=15%  Similarity=0.142  Sum_probs=117.8

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |-+.||+.-..  =+++++++-.- . +....+    ..+++++|.+-|.+|++|=+|- |+...|..  .+.++. .|+
T Consensus       177 DYD~Le~~A~~--frPk~iiaG~S-a-Y~R~~D----YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vi--psPFey-~Di  245 (477)
T KOG2467|consen  177 DYDKLEKTATL--FRPKLIIAGTS-A-YSRLID----YARFRKIADKVGAYLMADMAHISGLVAAGVI--PSPFEY-CDI  245 (477)
T ss_pred             ehHHHHHHHHh--cCCcEEEeccc-c-chhhcc----HHHHHHHHHhcCceeehhhhhHHHHHhcccC--CCcccc-cce
Confidence            45666665554  24556655322 2 222344    8999999999999999999995 66444432  122222 365


Q ss_pred             E--EecccccCCcccceeeEeCHHHHhhc-C------------------CCCccCCCCCCHHHHHHHHHHHHHHhhc---
Q 021893          125 V--ILGKALGGGVIPVSAVLADKEVMLCI-Q------------------PGEHGSTFGGNPLASAVAIASLDVIRDE---  180 (306)
Q Consensus       125 ~--s~sK~~~~G~~~~g~~~~~~~~~~~~-~------------------~~~~~~~~~~~~~~~~aa~~al~~~~~~---  180 (306)
                      +  +.-|++-|.  |.|.+..++.+...= +                  +..+++   ++.-.+++...||++..+.   
T Consensus       246 VTTTTHKsLRGP--Rg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGG---PHNhtIaalAvALkQa~tpefk  320 (477)
T KOG2467|consen  246 VTTTTHKSLRGP--RGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGG---PHNHTIAALAVALKQAMTPEFK  320 (477)
T ss_pred             eeccccccccCC--cceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCC---CCcchHHHHHHHHHhhCCHHHH
Confidence            5  445888643  445466655432111 0                  001111   1222344444566666653   


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE-eeeEEEEEEecCC-ChhhHHHHHHHH---HHCCceecc---CCCCE
Q 021893          181 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFDKTA-LPVSAYDICLKM---KERGILAKP---THDTI  252 (306)
Q Consensus       181 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-~g~~~~i~~~~~~-~~~~~~~~~~~l---~~~Gi~~~~---~~~~~  252 (306)
                      .+.+++.++.+.+.+.|.+.+     ......+ ...++.+++.+.. .+...+.+++.+   ..+.-+.+.   -.++.
T Consensus       321 ~Yq~qV~~Nakala~~l~~~G-----y~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgG  395 (477)
T KOG2467|consen  321 EYQKQVLKNAKALASALISRG-----YKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGG  395 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHcC-----ceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCc
Confidence            367788888888888888874     2223333 4455666666532 223344444433   222222221   24677


Q ss_pred             EEEeCCCCC----CHHHHHHHHHHHHHHHh
Q 021893          253 VRLTPPLSI----SSNELQEGSKALHDVLE  278 (306)
Q Consensus       253 lRi~~~~~~----t~~~i~~~~~~l~~~l~  278 (306)
                      +|+.-+..+    .++|.+...+-|.++++
T Consensus       396 iRiGtPAmTsRG~~e~df~~v~~fi~~av~  425 (477)
T KOG2467|consen  396 IRIGTPAMTSRGFGEEDFEKVADFIDRAVK  425 (477)
T ss_pred             eeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence            999876544    45777777777777765

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=97.62  E-value=0.0052  Score=57.75  Aligned_cols=215  Identities=16%  Similarity=0.182  Sum_probs=135.2

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh----cccccccccccccCCCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS----GLARSGRMLASDWEEVR  121 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~----g~~~~g~~~~~~~~~~~  121 (306)
                      |+.+|++.-++|.++.+++.|.-+...+  +  -++-++.++++.++||=-+..|.+-.    |+.+.|.        +.
T Consensus       666 d~~dLk~kaekh~~~Laa~MvTYPST~G--v--fE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd--------~G  733 (1001)
T KOG2040|consen  666 DMVDLKAKAEKHKDNLAALMVTYPSTHG--V--FEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGD--------IG  733 (1001)
T ss_pred             cHHHHHHHHHHhhhhhheeEEecccccc--c--ccccHHHHHHHHHhcCCEEEecCCCccceecccCCcc--------cc
Confidence            8999999999998889999887766544  3  24559999999999999999997653    4433332        33


Q ss_pred             CcEE--Eeccccc-----CCcccceeeEeCHHHHhhcCCCCc-----------cCCC----CCCHHHHHHHHHHHHHHhh
Q 021893          122 PDMV--ILGKALG-----GGVIPVSAVLADKEVMLCIQPGEH-----------GSTF----GGNPLASAVAIASLDVIRD  179 (306)
Q Consensus       122 ~d~~--s~sK~~~-----~G~~~~g~~~~~~~~~~~~~~~~~-----------~~~~----~~~~~~~~aa~~al~~~~~  179 (306)
                      .|+.  -+-|.|+     ||. .+|=+.+++.+.-.+-....           .++.    .++..-+...++.++++..
T Consensus       734 aDV~HLNLHKTFcIPHGGGGP-g~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~  812 (1001)
T KOG2040|consen  734 ADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGS  812 (1001)
T ss_pred             ccceeecccceeeecCCCCCC-CCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhcc
Confidence            4444  3346664     455 66656555554433321100           0111    2344556667788888877


Q ss_pred             ccH---HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE---EEEEEecCC--ChhhHHHHHHHHHHCCceecc---C
Q 021893          180 EKL---AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF---NAVEFDKTA--LPVSAYDICLKMKERGILAKP---T  248 (306)
Q Consensus       180 ~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~---~~i~~~~~~--~~~~~~~~~~~l~~~Gi~~~~---~  248 (306)
                      .++   .+...-+..++.++|+.-...     ......|.+   +.+++.+-+  .+.++.+++++|.+-|...-.   .
T Consensus       813 ~GL~~as~~AiLNaNYMakRLe~hYki-----l~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPTmswP  887 (1001)
T KOG2040|consen  813 GGLKDASKIAILNANYMAKRLESHYKI-----LFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMSWP  887 (1001)
T ss_pred             cccchhhHHHhhhhHHHHHHHhhccce-----eEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCCCccccc
Confidence            543   333345667777777775311     111222221   222222211  346788999999999977432   2


Q ss_pred             CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 ~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      -.+.+.+-|.-.-+++++|++++++-.+-+
T Consensus       888 V~gtLMIEPTESE~k~ElDRfcdAliSIre  917 (1001)
T KOG2040|consen  888 VAGTLMIEPTESEDKAELDRFCDALISIRE  917 (1001)
T ss_pred             cCCceEeccCccccHHHHHHHHHHHHHHHH
Confidence            367899998878888999999999866655

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=97.60  E-value=0.0057  Score=53.77  Aligned_cols=197  Identities=15%  Similarity=0.115  Sum_probs=117.6

Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--EecccccCCcccc
Q 021893           61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPV  138 (306)
Q Consensus        61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~  138 (306)
                      .+-|..+++...+|..++....      ...  +.++++|-+-.-+   +..+  +..  +-|++  +..|-+|+-  ++
T Consensus       145 ~ayv~~~~NeTi~Gv~v~~~p~------~~~--~~~~v~D~SS~il---sr~i--Dvs--k~dviyagaQKnlGpa--Gl  207 (365)
T COG1932         145 DAYVHFCWNETISGVEVPELPD------IGS--DGLLVADASSAIL---SRPI--DVS--KYDVIYAGAQKNLGPA--GL  207 (365)
T ss_pred             ccEEEEecCCcccceEccCCCC------CCC--CceEEEecccHHh---cCCC--Chh--HcceEEEehhhccCcc--ce
Confidence            3346666666666766553221      111  1677777554311   1111  111  22444  445999832  24


Q ss_pred             eeeEeCHHHHhhcCCC------------CccCCCC-CCHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHHHHHHHH
Q 021893          139 SAVLADKEVMLCIQPG------------EHGSTFG-GNPLASAVAIASLDVIRDE----KLAERSAHLGEELRQHLFKIQ  201 (306)
Q Consensus       139 g~~~~~~~~~~~~~~~------------~~~~~~~-~~~~~~~aa~~al~~~~~~----~~~~~~~~~~~~l~~~L~~~~  201 (306)
                      +.++.++++.+++.+.            ....+|. ++..+.-.+..+++++...    .+.++.++..+.|.+.+.+-.
T Consensus       208 tvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~  287 (365)
T COG1932         208 TVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSD  287 (365)
T ss_pred             EEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            6678899999887653            1233443 3445666677889999873    356677777777777777652


Q ss_pred             hhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC--CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          202 QQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT--HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       202 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                       .+...+....-+-+-+.|.+.+   ......|.+.+.++|+..-.+  ..+.+|+++-...+.++++.+++.++.+.+
T Consensus       288 -fy~~~v~~~~RS~mnV~f~~~~---~~ld~~fv~eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL~~fm~~f~~  362 (365)
T COG1932         288 -FYRNLVAKANRSRMNVTFTLVD---AELDKGFVAEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALTDFMDWFEE  362 (365)
T ss_pred             -ccccccchhhccceeEEEEcCc---HHHHHHHHHHHHHcCCceeccccCCCceeeeeecCCCHHHHHHHHHHHHHHHH
Confidence             2211222211122223555553   344567888888888776544  244599998888899999999998887765

>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]

Probab=97.52  E-value=0.00024  Score=59.36  Aligned_cols=229  Identities=18%  Similarity=0.192  Sum_probs=117.3

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccc--cccccc-cCCCCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG--RMLASD-WEEVRP  122 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g--~~~~~~-~~~~~~  122 (306)
                      |++.+++.+++.++...+.+.....+-..   -+++-+++|..+|..|+++-|+.++|+ +....  ...... .-| ..
T Consensus       142 dleav~~~iee~g~dcilci~sttscfap---r~pd~leaiaaica~~diphivnnayg-lqsee~i~~iaa~~~~g-ri  216 (432)
T KOG3843|consen  142 DLEAVEAIIEELGEDCILCIHSTTSCFAP---RSPDNLEAIAAICAAHDIPHIVNNAYG-LQSEECIHKIAAAAECG-RI  216 (432)
T ss_pred             hHHHHHHHHHHhCCceEEEEeecccccCC---CCCchHHHHHHHHHccCchhhhccccc-cchHHHHHHHHHHhhhc-cH
Confidence            79999999999887776666655544332   245669999999999999999999995 10000  001000 011 22


Q ss_pred             cEE--EecccccCCcccce--eeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Q 021893          123 DMV--ILGKALGGGVIPVS--AVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHL  197 (306)
Q Consensus       123 d~~--s~sK~~~~G~~~~g--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L  197 (306)
                      |.+  |+-|.|.   .|+|  .+.+ +..+++.+.+...+.....+..-+...+-.+-.-.-.+....-++.-.+++..+
T Consensus       217 da~vqsldknf~---vpvggaiia~fk~n~iq~iak~ypgrasa~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki  293 (432)
T KOG3843|consen  217 DAFVQSLDKNFM---VPVGGAIIAAFKDNFIQEIAKMYPGRASASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKI  293 (432)
T ss_pred             HHHHHHhhhcce---eecchhHhhHhHHHHHHHHHHhCCCccccCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHH
Confidence            322  6667776   1222  1222 455555554322222222222222221111100000112223333334444555


Q ss_pred             HHHHhhCCCceeeEEEeeeEEEEEEecCCChh--hHHHHHHHHHHCCce---eccC----------------------CC
Q 021893          198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPV--SAYDICLKMKERGIL---AKPT----------------------HD  250 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~--~~~~~~~~l~~~Gi~---~~~~----------------------~~  250 (306)
                      .+..+.+.+.+..++..-..+.+.+...+...  ....|...|..+||.   +.|.                      +.
T Consensus       294 ~~~ae~~~e~l~~~p~n~is~amtl~ti~~~k~kavt~~gsilfak~isgarvv~~~q~kttieg~ef~~f~sht~e~~~  373 (432)
T KOG3843|consen  294 IKFAEAIGECLLETPENEISLAMTLKTIDEAKDKAVTLFGSILFAKGISGARVVPLGQMKTTIEGCEFIGFGSHTNEQHC  373 (432)
T ss_pred             HHHHHHhhhhhhcCCCchhhhhhhhccCChHHhhHHHHHHHHHHhccccCceEeeccccceeeeceEEeccccccCcCch
Confidence            55544443344444443333333333211111  123566777777643   3331                      12


Q ss_pred             CEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          251 TIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       251 ~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      +++-.+.....+..|+++++.||.+.+. .+.+
T Consensus       374 ~yln~a~aigm~~hdld~~~~rl~~~~a-~~~k  405 (432)
T KOG3843|consen  374 AYLNAACAIGMKDHDLDEFFNRLDRCLA-AFRK  405 (432)
T ss_pred             hHhhHHHhcCCcHhHHHHHHHHHHHHHH-HHHH
Confidence            3444555567888999999999988887 5543

>PRK12566 glycine dehydrogenase; Provisional

Probab=97.43  E-value=0.0064  Score=60.51  Aligned_cols=202  Identities=14%  Similarity=0.072  Sum_probs=119.1

Q ss_pred             HHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE-E
Q 021893           48 TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV-I  126 (306)
Q Consensus        48 ~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~-s  126 (306)
                      +++++.+.   +++.++++..++. .|.+.+    +++|.+++|++|.++|+- +  +.-.-+...  ..-++..|++ .
T Consensus       199 ~~~~~~~~---~~~~~v~vq~P~~-~G~i~d----~~~i~~~~h~~gal~~~~-~--d~laL~ll~--~Pge~GADI~vG  265 (954)
T PRK12566        199 DAVDNLAA---HAVFGALLQYPDT-HGEIRD----LRPLIDQLHGQQALACVA-A--DLLSLLVLT--PPGELGADVVLG  265 (954)
T ss_pred             cchhhcCC---CCEEEEEEECCCC-ceEEcc----HHHHHHHHHHcCCEEEEE-e--CHHHHhCCC--ChhhcCCcEEee
Confidence            34444443   4688888866654 455656    999999999999987732 1  110011111  1123456765 3


Q ss_pred             eccccc-----CCcccceeeEeCHHHHhhcCCCCcc----------------------------CCCCCCH-H-HHHHHH
Q 021893          127 LGKALG-----GGVIPVSAVLADKEVMLCIQPGEHG----------------------------STFGGNP-L-ASAVAI  171 (306)
Q Consensus       127 ~sK~~~-----~G~~~~g~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~-~-~~~aa~  171 (306)
                      .++.||     ||. -.|++.+++++..++-....+                            ...+.+. + +..++.
T Consensus       266 ~~Q~fGvp~~~GGP-~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~  344 (954)
T PRK12566        266 STQRFGVPMGYGGP-HAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGF  344 (954)
T ss_pred             CCCcCCCCCCCCCC-CeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHH
Confidence            345555     777 789999999887766432100                            0011111 1 222222


Q ss_pred             HHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC
Q 021893          172 ASLDVIRDEK---LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT  248 (306)
Q Consensus       172 ~al~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~  248 (306)
                      . +-.+..++   +.+++..+..++.+.|.+.+...       .....+-.+.+.-   +....++.+...++|+-++-.
T Consensus       345 Y-~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~-------~~~~fF~~~~v~~---~~~~~~~~~~a~~~~~n~r~~  413 (954)
T PRK12566        345 Y-AVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIKR-------LNRHFFDTLTLEV---GGAQAAIIESAEAARINLRIL  413 (954)
T ss_pred             H-HHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCcc-------ccCCccceEEEEc---cCCHHHHHHHHHHCCCeeEEe
Confidence            1 11222333   45567777778888888853221       1112222333331   114667889999999988877


Q ss_pred             CCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893          249 HDTIVRLTPPLSISSNELQEGSKALH  274 (306)
Q Consensus       249 ~~~~lRi~~~~~~t~~~i~~~~~~l~  274 (306)
                      +++.+.+++.=.++.+|++.+++.+.
T Consensus       414 ~~~~~~~s~de~~~~~~~~~~~~~f~  439 (954)
T PRK12566        414 GRGRLGVSLDETCDEATVARLFDIFL  439 (954)
T ss_pred             CCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence            77889999888899999999999884

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=97.07  E-value=0.0097  Score=50.96  Aligned_cols=99  Identities=16%  Similarity=0.205  Sum_probs=69.8

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc--CCEEEEehhhhcccccccccccccCCCCCc
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--NILMIADEIQSGLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~--gi~li~De~~~g~~~~g~~~~~~~~~~~~d  123 (306)
                      |.+.++..++   ++|++|.+.-.....-.-..+-+.++++.++.++-  ++++++|++|+.|...     .+...+..|
T Consensus       154 D~~~v~~~i~---~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~-----~EPt~vGaD  225 (416)
T COG4100         154 DIQAVKTAIS---DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEE-----KEPTHVGAD  225 (416)
T ss_pred             cHHHHHHhcC---ccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhc-----cCccccchh
Confidence            7888988888   68999998664332211122455678888888774  5899999999877322     222345667


Q ss_pred             EE--EecccccCCcccce-eeEeCHHHHhhcC
Q 021893          124 MV--ILGKALGGGVIPVS-AVLADKEVMLCIQ  152 (306)
Q Consensus       124 ~~--s~sK~~~~G~~~~g-~~~~~~~~~~~~~  152 (306)
                      ++  |+-|..|||+...| |++++++++++..
T Consensus       226 liAGSLIKNpGGgiaktGGYiaGk~~~ve~~~  257 (416)
T COG4100         226 LIAGSLIKNPGGGIAKTGGYIAGKAELVEAAA  257 (416)
T ss_pred             hhccceeeCCCCceeeccceeechHHHHHhhc
Confidence            65  77799998887776 7899999987653

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=96.99  E-value=0.02  Score=54.95  Aligned_cols=150  Identities=19%  Similarity=0.207  Sum_probs=88.8

Q ss_pred             CHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHH---HHcCC--EEEEehhhhccccc------cc
Q 021893           46 DITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLC---SKYNI--LMIADEIQSGLARS------GR  111 (306)
Q Consensus        46 d~~~le~~i~~---~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~---~~~gi--~li~De~~~g~~~~------g~  111 (306)
                      |++.|++.|++   .+..+.+|+..-....+|.+=+    +++|.++|   +++|+  ++.+|.+|+|+...      +.
T Consensus       261 d~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDp----l~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~  336 (608)
T TIGR03811       261 DINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDG----IDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDN  336 (608)
T ss_pred             CHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCC----HHHHHHHHHHHHHcCCceeEeeeccccchhhhhhcccccc
Confidence            79999999975   2334566666667777887766    88888887   77998  69999999985310      00


Q ss_pred             cccc---------------------c-----cCCC-CCcEEEec--ccccCCcccceeeEeCH-HHHhhcCC---CC--c
Q 021893          112 MLAS---------------------D-----WEEV-RPDMVILG--KALGGGVIPVSAVLADK-EVMLCIQP---GE--H  156 (306)
Q Consensus       112 ~~~~---------------------~-----~~~~-~~d~~s~s--K~~~~G~~~~g~~~~~~-~~~~~~~~---~~--~  156 (306)
                      ..+.                     +     ..++ ..|-+++.  |.+.-.+ ++|.++.+. .+.+.+.-   ..  .
T Consensus       337 ~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py-~~G~ll~Rd~~~~~~~~~~a~Yl~~~  415 (608)
T TIGR03811       337 FIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPY-SAGGIVIQDIRMRDVISYFATYVFEK  415 (608)
T ss_pred             ccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCC-CeEEEEEeCHHHHHHHhcCcchhccc
Confidence            0000                     0     0011 23545444  8887777 888777764 43333311   10  0


Q ss_pred             c-------C--CCCCCH--HHHHHHHHHHHHH--hhc---cHHHHHHHHHHHHHHHHHHH
Q 021893          157 G-------S--TFGGNP--LASAVAIASLDVI--RDE---KLAERSAHLGEELRQHLFKI  200 (306)
Q Consensus       157 ~-------~--~~~~~~--~~~~aa~~al~~~--~~~---~~~~~~~~~~~~l~~~L~~~  200 (306)
                      .       .  +..++.  ...++...+++.+  ..+   ++.++..++.+++.+.|++.
T Consensus       416 ~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~  475 (608)
T TIGR03811       416 GADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL  475 (608)
T ss_pred             cccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            0       0  112222  3355566777776  333   35566667777777777774

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]

Probab=96.52  E-value=0.008  Score=52.39  Aligned_cols=213  Identities=19%  Similarity=0.238  Sum_probs=111.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc----cccc---C
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML----ASDW---E  118 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~----~~~~---~  118 (306)
                      |.+.+-+.+.+.++.-.+++--..+|+|| +-|+.|.+++|.++.++.+.+-++|-+|.|| ..|..-    +...   .
T Consensus       184 d~~g~ledl~~~p~gs~ilLhaCaHNPTG-vDPt~eqw~ki~~~~~~k~~~pffDmAYQGf-aSG~~d~DA~avR~F~~~  261 (427)
T KOG1411|consen  184 DFKGMLEDLGEAPEGSIILLHACAHNPTG-VDPTKEQWEKISDLIKEKNLLPFFDMAYQGF-ASGDLDKDAQAVRLFVED  261 (427)
T ss_pred             chHHHHHHHhcCCCCcEEEeehhhcCCCC-CCccHHHHHHHHHHhhhccccchhhhhhccc-ccCCchhhHHHHHHHHHc
Confidence            56665566666555555555566788898 6789999999999999999999999999987 233321    1111   1


Q ss_pred             CCCCcEE-Eeccccc-CCcccceee---EeCHHHHhhcCCC---CccCCCCCCHH-HHHHHHHHHHHHhh----------
Q 021893          119 EVRPDMV-ILGKALG-GGVIPVSAV---LADKEVMLCIQPG---EHGSTFGGNPL-ASAVAIASLDVIRD----------  179 (306)
Q Consensus       119 ~~~~d~~-s~sK~~~-~G~~~~g~~---~~~~~~~~~~~~~---~~~~~~~~~~~-~~~aa~~al~~~~~----------  179 (306)
                      +...-+. |++|-+| =|- |+|.+   +-+++...+....   .....|+.+++ +...+.   .++.+          
T Consensus       262 g~~~~laQSyAKNMGLYgE-RvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~---~Il~d~~l~~~W~~e  337 (427)
T KOG1411|consen  262 GHEILLAQSYAKNMGLYGE-RVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVA---TILSDPDLKNQWLGE  337 (427)
T ss_pred             CCceEeehhhhhhcchhhh-ccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhh---hccCChHHHHHHHHH
Confidence            2222222 7889998 344 67744   2244433332211   11112222222 111111   11111          


Q ss_pred             -ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCC
Q 021893          180 -EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPP  258 (306)
Q Consensus       180 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~  258 (306)
                       ....+++...+..+.+.|+...... .|.......|+++.--+       ..+++-..-.+.-|+...  ++  |++.+
T Consensus       338 vk~MadRi~~mR~~L~d~L~~~gs~~-~W~hI~~QIGMF~fTgl-------~peQv~~l~ke~~iYmT~--dG--RiS~a  405 (427)
T KOG1411|consen  338 VKGMADRIISMRQQLFDALEKEGSPG-NWSHITKQIGMFCFTGL-------NPEQVDWLTKEYHIYLTK--DG--RISMA  405 (427)
T ss_pred             HHHHHHhhhhhHHHHhHHhhcCCCCc-cHHHHHHhhheeeecCC-------CHHHHHHHHhhheeeecc--Cc--eEeec
Confidence             1123444455555555555443222 23334455666544322       233333333455777754  33  45543


Q ss_pred             CCCCHHHHHHHHHHHHHHH
Q 021893          259 LSISSNELQEGSKALHDVL  277 (306)
Q Consensus       259 ~~~t~~~i~~~~~~l~~~l  277 (306)
                       ..+...+.++.++|.+.-
T Consensus       406 -G~ss~nV~yLa~aih~vt  423 (427)
T KOG1411|consen  406 -GLSSSNVPYLADAIHAVT  423 (427)
T ss_pred             -cccccCCcccchhhHhHh
Confidence             345566777777665443

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=90.08  E-value=14  Score=35.69  Aligned_cols=195  Identities=14%  Similarity=0.199  Sum_probs=110.8

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE-Eeccccc-----
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV-ILGKALG-----  132 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~-s~sK~~~-----  132 (306)
                      +++..+++.-+... |.+.+    ..++.+++++.+.++++-.-.-.+     ...-+.-++..|+. ..|..||     
T Consensus       246 ~~v~gvlvQYP~t~-G~i~d----~~el~~~a~~~~s~vv~atDLLaL-----tiLrpPgefGaDIavGSsQRFGVPlGY  315 (1001)
T KOG2040|consen  246 KDVSGVLVQYPDTE-GSVLD----FDELVELAHANGSLVVMATDLLAL-----TILRPPGEFGADIAVGSSQRFGVPLGY  315 (1001)
T ss_pred             cceeEEEEEcCCCC-CcccC----HHHHHHHhhccCceEEEeehhhHH-----HccCChhhcCceeeeccccccCccccC
Confidence            46888888766554 55777    899999999999887743211100     00011123445655 3334444     


Q ss_pred             CCcccceeeEeCHHHHhhcCCCCccCC-----------------------C-CCCHHHHHHHHHHHHHHhh--------c
Q 021893          133 GGVIPVSAVLADKEVMLCIQPGEHGST-----------------------F-GGNPLASAVAIASLDVIRD--------E  180 (306)
Q Consensus       133 ~G~~~~g~~~~~~~~~~~~~~~~~~~~-----------------------~-~~~~~~~~aa~~al~~~~~--------~  180 (306)
                      ||. -.||+.+++++...+-..-.+.+                       - +.|.=.+.|.++-+..+-.        +
T Consensus       316 GGP-HAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~  394 (1001)
T KOG2040|consen  316 GGP-HAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLK  394 (1001)
T ss_pred             CCc-hHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHH
Confidence            565 66677777666544332100000                       0 1122222233333333211        3


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCC
Q 021893          181 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLS  260 (306)
Q Consensus       181 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~  260 (306)
                      ++..++......|...|+..+.+.       .....+-.+.+.   .+...+++.....+++|-++--..+.+-+++.-.
T Consensus       395 ~IArrvh~~T~~l~~~l~~aghel-------~~k~fFDTLkI~---~~~s~~~~l~rA~~~~iNlr~~ed~tigvslDET  464 (1001)
T KOG2040|consen  395 EIARRVHNLTLILAEGLKNAGHEL-------QHKPFFDTLKIR---CGCSAEEVLDRAAKRQINLRLVEDGTIGVSLDET  464 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHhhcchhh-------ccccccceEEEE---ecCcHHHHHHHHHhhcCceEEeecCceEEeeccc
Confidence            356667777777777777765321       111122122222   1235778888888888888777778888888778


Q ss_pred             CCHHHHHHHHHHHH
Q 021893          261 ISSNELQEGSKALH  274 (306)
Q Consensus       261 ~t~~~i~~~~~~l~  274 (306)
                      .+++|++.++..+.
T Consensus       465 v~~~DvddLl~vf~  478 (1001)
T KOG2040|consen  465 VTEKDVDDLLWVFN  478 (1001)
T ss_pred             ccHHHHHHHHHHHc
Confidence            89999999998885

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	306
1oat_A	439	Ornithine Aminotransferase Length = 439		2e-74
2byj_A	439	Ornithine Aminotransferase Mutant Y85i Length = 439		2e-74
2can_A	402	Human Ornithine Aminotransferase Complexed With L-C		2e-74
2byl_A	439	Structure Of Ornithine Aminotransferase Triple Muta		2e-73
3ruy_A	392	Crystal Structure Of The Ornithine-Oxo Acid Transam		2e-70
3lg0_A	422	Structure Of Plasmodium Falciparum Ornithine Delta-		2e-69
1z7d_A	433	Ornithine Aminotransferase Py00104 From Plasmodium		3e-67
2e54_A	385	Crystal Structure Of Acetylornithine Aminotransfera		4e-39
2ord_A	397	Crystal Structure Of Acetylornithine Aminotransfera		2e-38
2eh6_A	375	Crystal Structure Of Acetylornithine Aminotransfera		4e-38
2pb0_A	420	Structure Of Biosynthetic N-Acetylornithine Aminotr		3e-37
3oks_A	451	Crystal Structure Of 4-Aminobutyrate Transaminase F		2e-36
2eo5_A	419	Crystal Structure Of 4-Aminobutyrate Aminotransfera		3e-36
3nx3_A	395	Crystal Structure Of Acetylornithine Aminotransfera		4e-36
1vef_A	395	Acetylornithine Aminotransferase From Thermus Therm		5e-36
4adb_A	406	Structural And Functional Study Of Succinyl-ornithi		5e-33
3dod_A	448	Crystal Structure Of Plp Bound 7,8-diaminopelargoni		6e-33
3du4_A	448	Crystal Structure Of 7-Keto-8-Aminopelargonic Acid		6e-33
3q8n_A	453	Crystal Structure Of 4-Aminobutyrate Transaminase F		4e-32
3r4t_A	467	Crystal Structure Of 4-Aminobutyrate Aminotransfera		6e-32
1sf2_A	426	Structure Of E. Coli Gamma-Aminobutyrate Aminotrans		2e-31
1szs_A	426	The Structure Of Gamma-aminobutyrate Aminotransfera		2e-31
1szu_A	426	The Structure Of Gamma-Aminobutyrate Aminotransfera		7e-31
1szk_A	426	The Structure Of Gamma-Aminobutyrate Aminotransfera		9e-31
4ffc_A	453	Crystal Structure Of A 4-Aminobutyrate Aminotransfe		4e-29
4atp_A	456	Structure Of Gaba-Transaminase A1r958 From Arthroba		4e-27
3n5m_A	452	Crystals Structure Of A Bacillus Anthracis Aminotra		1e-26
3nui_A	478	Crystal Structure Of Omega-Transferase From Vibrio		6e-26
1dty_A	429	Crystal Structure Of Adenosylmethionine-8-Amino-7-O		2e-25
1dgd_A	432	An Alkali Metal Ion Size-Dependent Switch In The Ac		2e-25
1qj3_A	429	Crystal Structure Of 7,8-Diaminopelargonic Acid Syn		2e-25
1d7r_A	433	Crystal Structure Of The Complex Of 2,2-Dialkylglyc		2e-25
1m0n_A	433	Structure Of Dialkylglycine Decarboxylase Complexed		2e-25
1z3z_A	431	The Crystal Structure Of A Dgd Mutant: Q52a Length		2e-25
1s09_A	429	Crystal Structure Of The Y144f Mutant Of 7,8- Diami		3e-25
4e3q_A	473	Pmp-Bound Form Of Aminotransferase Crystal Structur		4e-25
1mgv_A	429	Crystal Structure Of The R391a Mutant Of 7,8-Diamin		4e-25
1s08_A	429	Crystal Structure Of The D147n Mutant Of 7,8- Diami		5e-25
4grx_A	465	Structure Of An Omega-Aminotransferase From Paracoc		5e-25
4e3r_A	473	Plp-Bound Aminotransferase Mutant Crystal Structure		7e-25
1s0a_A	429	Crystal Structure Of The Y17f Mutant Of 7,8- Diamin		7e-25
3tft_A	457	Crystal Structure Of 7,8-Diaminopelargonic Acid Syn		9e-25
1s07_A	429	Crystal Structure Of The R253a Mutant Of 7,8-Diamin		1e-24
1s06_A	429	Crystal Structure Of The R253k Mutant Of 7,8- Diami		2e-24
3bv0_A	437	Crystal Structure Of Plp Bound 7,8-Diaminopelargoni		7e-24
3lv2_A	462	Crystal Structure Of Mycobacterium Tuberculosis 7,8		7e-24
3i4j_A	430	Crystal Structure Of Aminotransferase, Class Iii Fr		8e-23
3gju_A	459	Crystal Structure Of A Putative Aminotransferase (M		1e-22
2jjf_A	449	N328a Mutant Of M. Tuberculosis Rv3290c Length = 44		2e-22
2cin_A	449	Lysine Aminotransferase From M. Tuberculosis In The		3e-22
3fcr_A	459	Crystal Structure Of Putative Aminotransferase (Yp_		3e-22
4a6r_A	459	Crystal Structure Of The Omega Transaminase From Ch		3e-22
2jje_A	449	Crystal Structure Of T330s Mutant Of Rv3290c From M		6e-22
2jjh_A	449	E243 Mutant Of M. Tuberculosis Rv3290c Length = 449		1e-21
3i5t_A	476	Crystal Structure Of Aminotransferase Prk07036 From		2e-21
3hmu_A	472	Crystal Structure Of A Class Iii Aminotransferase F		2e-21
3dxw_A	452	The Crystal Structure Of Alpha-Amino-Epsilon-Caprol		3e-21
2zuk_A	439	The Crystal Structure Of Alpha-Amino-Epsilon-Caprol		3e-21
3fq7_A	427	Gabaculine Complex Of Gsam Length = 427		8e-21
3a8u_X	449	Crystal Structure Of Omega-Amino Acid:pyruvate Amin		9e-21
2gsa_A	432	Crystal Structure Of Glutamate-1-Semialdehyde Amino		9e-21
2hoy_A	432	Inter-Subunit Signaling In Gsam Length = 432		9e-21
3fqa_A	427	Gabaculien Complex Of Gabaculine Resistant Gsam Ver		2e-20
3fq8_A	427	M248i Mutant Of Gsam Length = 427		2e-20
2cfb_A	411	Glutamate-1-Semialdehyde 2,1-Aminomutase From Therm		1e-19
2e7u_A	424	Crystal Structure Of Glutamate-1-Semialdehyde 2,1-A		1e-19
2epj_A	434	Crystal Structure Of Glutamate-1-Semialdehyde 2,1-A		2e-19
3bs8_A	438	Crystal Structure Of Glutamate 1-Semialdehyde Amino		9e-19
3k28_A	429	Crystal Structure Of A Glutamate-1-Semialdehyde Ami		2e-16
1ohv_A	472	4-aminobutyrate-aminotransferase From Pig Length =		1e-15
3l44_A	434	Crystal Structure Of Bacillus Anthracis Heml-1, Glu		1e-15
4e77_A	429	2.0a Crystal Structure Of A Glutamate-1-Semialdehyd		2e-15
4ao9_A	454	Biochemical Properties And Crystal Structure Of A N		3e-08
2cy8_A	453	Crystal Structure Of D-Phenylglycine Aminotransfera		4e-08
2yku_A	465	Structural Determinants Of The Beta-Selectivity Of		4e-08
4a0g_A	831	Structure Of Bifunctional Dapa Aminotransferase-Dtb		3e-07
4a0f_A	831	Structure Of Selenomethionine Substituted Bifunctio		6e-06

>pdb|1OAT|A Chain A, Ornithine Aminotransferase Length = 439

Iteration: 1
 Score =  275 bits (704), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 138/276 (50%), Positives = 191/276 (69%), Gaps = 6/276 (2%)
Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +A IV   G F GRTL+AIS S D  +  GFGP +PG   + + D+ ALE+  ++    +
Sbjct: 167 KAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQDP--NV 224
Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           A F+ EPIQGEAGV++P  GYL  VR+LC+++ +L IADEIQ+GLAR+GR LA D+E VR
Sbjct: 225 AAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVR 284
Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+V+LGKAL GG+ PVSAVL D ++ML I+PGEHGST+GGNPL   VAIA+L+V+ +E 
Sbjct: 285 PDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEEN 344
Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           LAE +  LG  LR  L K+     + V  VRG+GL NA+   +T     A+ +CL++++ 
Sbjct: 345 LAENADKLGIILRNELMKLPS---DVVTAVRGKGLLNAIVIKETK-DWDAWKVCLRLRDN 400
Query: 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           G+LAKPTH  I+R  PPL I  +EL+E  + ++  +
Sbjct: 401 GLLAKPTHGDIIRFAPPLVIKEDELRESIEIINKTI 436

>pdb|2BYJ|A Chain A, Ornithine Aminotransferase Mutant Y85i Length = 439

Iteration: 1
 Score =  275 bits (704), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 138/276 (50%), Positives = 191/276 (69%), Gaps = 6/276 (2%)
Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +A IV   G F GRTL+AIS S D  +  GFGP +PG   + + D+ ALE+  ++    +
Sbjct: 167 KAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQDP--NV 224
Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           A F+ EPIQGEAGV++P  GYL  VR+LC+++ +L IADEIQ+GLAR+GR LA D+E VR
Sbjct: 225 AAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVR 284
Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+V+LGKAL GG+ PVSAVL D ++ML I+PGEHGST+GGNPL   VAIA+L+V+ +E 
Sbjct: 285 PDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEEN 344
Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           LAE +  LG  LR  L K+     + V  VRG+GL NA+   +T     A+ +CL++++ 
Sbjct: 345 LAENADKLGIILRNELMKLPS---DVVTAVRGKGLLNAIVIKETK-DWDAWKVCLRLRDN 400
Query: 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           G+LAKPTH  I+R  PPL I  +EL+E  + ++  +
Sbjct: 401 GLLAKPTHGDIIRFAPPLVIKEDELRESIEIINKTI 436

>pdb|2CAN|A Chain A, Human Ornithine Aminotransferase Complexed With L-Canaline Length = 402

Iteration: 1
 Score =  275 bits (703), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 138/276 (50%), Positives = 191/276 (69%), Gaps = 6/276 (2%)
Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +A IV   G F GRTL+AIS S D  +  GFGP +PG   + + D+ ALE+  ++    +
Sbjct: 130 KAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQDP--NV 187
Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           A F+ EPIQGEAGV++P  GYL  VR+LC+++ +L IADEIQ+GLAR+GR LA D+E VR
Sbjct: 188 AAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVR 247
Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+V+LGKAL GG+ PVSAVL D ++ML I+PGEHGST+GGNPL   VAIA+L+V+ +E 
Sbjct: 248 PDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEEN 307
Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           LAE +  LG  LR  L K+     + V  VRG+GL NA+   +T     A+ +CL++++ 
Sbjct: 308 LAENADKLGIILRNELMKLPS---DVVTAVRGKGLLNAIVIKETK-DWDAWKVCLRLRDN 363
Query: 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           G+LAKPTH  I+R  PPL I  +EL+E  + ++  +
Sbjct: 364 GLLAKPTHGDIIRFAPPLVIKEDELRESIEIINKTI 399

>pdb|2BYL|A Chain A, Structure Of Ornithine Aminotransferase Triple Mutant Y85i Y55a G320f Length = 439

Iteration: 1
 Score =  272 bits (695), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 137/276 (49%), Positives = 190/276 (68%), Gaps = 6/276 (2%)
Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +A IV   G F GRTL+AIS S D  +  GFGP +PG   + + D+ ALE+  ++    +
Sbjct: 167 KAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQDP--NV 224
Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           A F+ EPIQGEAGV++P  GYL  VR+LC+++ +L IADEIQ+GLAR+GR LA D+E VR
Sbjct: 225 AAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVR 284
Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+V+LGKAL GG+ PVSAVL D ++ML I+PGEH ST+GGNPL   VAIA+L+V+ +E 
Sbjct: 285 PDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHFSTYGGNPLGCRVAIAALEVLEEEN 344
Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           LAE +  LG  LR  L K+     + V  VRG+GL NA+   +T     A+ +CL++++ 
Sbjct: 345 LAENADKLGIILRNELMKLPS---DVVTAVRGKGLLNAIVIKETK-DWDAWKVCLRLRDN 400
Query: 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           G+LAKPTH  I+R  PPL I  +EL+E  + ++  +
Sbjct: 401 GLLAKPTHGDIIRFAPPLVIKEDELRESIEIINKTI 436

>pdb|3RUY|A Chain A, Crystal Structure Of The Ornithine-Oxo Acid Transaminase Rocd From Bacillus Anthracis Length = 392

Iteration: 1
 Score =  262 bits (669), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 130/276 (47%), Positives = 184/276 (66%), Gaps = 11/276 (3%)
Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +A I+ C   FHGRT+ A+SMS + E  RGFGP+LPG + + +GD+ AL+     +    
Sbjct: 127 RAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYGDLEALKAAITPN---T 183
Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           A F+ EPIQGEAG+ IPP G+LK   ++C K N+L +ADEIQ+GL R+G++ A DW+ V 
Sbjct: 184 AAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVT 243
Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PDM ILG ALGGGV P+S   A+++++   +PG HGSTFGGNPLA AV+IA+L+V+ +EK
Sbjct: 244 PDMYILGXALGGGVFPISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEK 303
Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           L ERS  LGE+L   L +I       + EVRG+GLF  +E ++ A P      C ++K  
Sbjct: 304 LTERSLQLGEKLVGQLKEIDNPM---ITEVRGKGLFIGIELNEPARPY-----CEQLKAA 355
Query: 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           G+L K TH+ ++R+ PPL IS  +L+   + +  VL
Sbjct: 356 GLLCKETHENVIRIAPPLVISEEDLEWAFQKIKAVL 391

>pdb|3LG0|A Chain A, Structure Of Plasmodium Falciparum Ornithine Delta-Aminotransferase Length = 422

Iteration: 1
 Score =  258 bits (660), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 127/271 (46%), Positives = 180/271 (66%), Gaps = 5/271 (1%)
Query: 3   AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIA 62
           A I+ C   F GRTL  +S S D +    FGP +P  LKV + D+ ALEK  ++    + 
Sbjct: 138 AKIIVCNNNFSGRTLGCVSASTDKKCKNNFGPFVPNFLKVPYDDLEALEKELQDP--NVC 195
Query: 63  GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRP 122
            F+ EP+QGEAGVI+P D Y   V  LC KYN+L +ADE+Q+GL R+G++L +    V+P
Sbjct: 196 AFIVEPVQGEAGVIVPSDSYFPGVASLCKKYNVLFVADEVQTGLGRTGKLLCTHHYGVKP 255
Query: 123 DMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKL 182
           D+++LGKAL GG  P+SA+LA+ +VML ++PGEHGST+GGNPLA+A+ + +L V+ +EKL
Sbjct: 256 DVILLGKALSGGHYPISAILANDDVMLVLKPGEHGSTYGGNPLAAAICVEALKVLINEKL 315
Query: 183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG 242
            E +  LG    Q+L K Q +    V+EVRG+GL  A+EF      V+ +DICLK KE G
Sbjct: 316 CENADKLGAPFLQNL-KEQLKDSKVVREVRGKGLLCAIEFKNDL--VNVWDICLKFKENG 372
Query: 243 ILAKPTHDTIVRLTPPLSISSNELQEGSKAL 273
           ++ +  HD  VRLTPPL I+  +L E ++ +
Sbjct: 373 LITRSVHDKTVRLTPPLCITKEQLDECTEII 403

>pdb|1Z7D|A Chain A, Ornithine Aminotransferase Py00104 From Plasmodium Yoelii Length = 433

Iteration: 1
 Score =  251 bits (642), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 127/271 (46%), Positives = 182/271 (67%), Gaps = 5/271 (1%)
Query: 3   AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIA 62
           A IV C   F GRTL  IS S   +    FGP  P   KV + D+ ALE+  K+    + 
Sbjct: 157 AKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKDP--NVC 214
Query: 63  GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRP 122
            F+ EPIQGEAGVI+P D YL+ V D+C KYN+L +ADE+Q+GL R+G++L      V+P
Sbjct: 215 AFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKP 274
Query: 123 DMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKL 182
           D+++LGKAL GG  P+SAVLA+ ++ML I+PGEHGST+GGNPLA+++ + +L+V+ +EKL
Sbjct: 275 DVILLGKALSGGHYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKL 334
Query: 183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG 242
            E +  LG    ++L K + +    V++VRG+GL  A+EF K  L V+  DICLK+KE G
Sbjct: 335 CENAEKLGGPFLENL-KRELKDSKIVRDVRGKGLLCAIEF-KNEL-VNVLDICLKLKENG 391
Query: 243 ILAKPTHDTIVRLTPPLSISSNELQEGSKAL 273
           ++ +  HD  +RLTPPL I+  +L E ++ +
Sbjct: 392 LITRDVHDKTIRLTPPLCITKEQLDECTEII 422

>pdb|2E54|A Chain A, Crystal Structure Of Acetylornithine Aminotransferase From Thermotoga Maritima Length = 385

Iteration: 1
 Score =  158 bits (399), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 153/274 (55%), Gaps = 9/274 (3%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGF 64
           I+S    FHGRTL +++ +   +  + F PL+PG    +F ++  L +  K S D  A F
Sbjct: 119 ILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFNNVEDLRR--KMSEDVCAVF 176
Query: 65  LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124
           L EPIQGE+G++     +L+  R LC +Y+ L++ DE+Q G+ R+G++ A     V PD+
Sbjct: 177 L-EPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDV 235
Query: 125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 184
           +   K LGGGV P+ AV+ ++   + ++PG+HG+TFGGNPLA    +  +  +  E   E
Sbjct: 236 LTTAKGLGGGV-PIGAVIVNERANV-LEPGDHGTTFGGNPLACRAGVTVIKELTKEGFLE 293
Query: 185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 244
                G  L + L ++++++ + V +VRG GL   ++F +    VS  ++  K  E  +L
Sbjct: 294 EVEEKGNYLMKKLQEMKEEY-DVVADVRGMGLMIGIQFRE---EVSNREVATKCFENKLL 349
Query: 245 AKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
             P  +  +R  PPL++   E+    + L  VL+
Sbjct: 350 VVPAGNNTIRFLPPLTVEYGEIDLAVETLKKVLQ 383

>pdb|2ORD|A Chain A, Crystal Structure Of Acetylornithine Aminotransferase (Ec 2.6.1.11) (Acoat) (Tm1785) From Thermotoga Maritima At 1.40 A Resolution Length = 397

Iteration: 1
 Score =  156 bits (394), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 151/274 (55%), Gaps = 9/274 (3%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGF 64
           I+S    FHGRTL +++ +   +  + F PL+PG    +F ++  L +  K S D  A F
Sbjct: 131 ILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFNNVEDLRR--KXSEDVCAVF 188
Query: 65  LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124
           L EPIQGE+G++     +L+  R LC +Y+ L++ DE+Q G  R+G++ A     V PD+
Sbjct: 189 L-EPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGXGRTGKLFAYQKYGVVPDV 247
Query: 125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 184
           +   K LGGGV P+ AV+ ++   + ++PG+HG+TFGGNPLA    +  +  +  E   E
Sbjct: 248 LTTAKGLGGGV-PIGAVIVNERANV-LEPGDHGTTFGGNPLACRAGVTVIKELTKEGFLE 305
Query: 185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 244
                G  L + L + ++++ + V +VRG GL   ++F +    VS  ++  K  E  +L
Sbjct: 306 EVEEKGNYLXKKLQEXKEEY-DVVADVRGXGLXIGIQFRE---EVSNREVATKCFENKLL 361
Query: 245 AKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
             P  +  +R  PPL++   E+    + L  VL+
Sbjct: 362 VVPAGNNTIRFLPPLTVEYGEIDLAVETLKKVLQ 395

>pdb|2EH6|A Chain A, Crystal Structure Of Acetylornithine Aminotransferase From Aquifex Aeolicus Vf5 Length = 375

Iteration: 1
 Score =  154 bits (390), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 92/278 (33%), Positives = 143/278 (51%), Gaps = 27/278 (9%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGF 64
            +S    FHGRT  ++S +   +  +GF PL+PG       DI ++ K+  E   + AG 
Sbjct: 120 FISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLNDIDSVYKLLDE---ETAGI 176
Query: 65  LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124
           + E IQGE GV    + +L  ++++C + ++L+I DE+Q+G+ R+G   A     ++PD+
Sbjct: 177 IIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDV 236
Query: 125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 184
           + L K LGGGV P+ A+LA +EV     PG HGSTFGGNPLA       +D +       
Sbjct: 237 IALAKGLGGGV-PIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEV------- 288
Query: 185 RSAHLGEELRQHLFKIQQQFPNYVKE-----VRGRGLFNAVEFDKTALPVSAYDICLKMK 239
                 E+L  H+ ++   F   +KE     V+GRGL   +E ++        D  LK  
Sbjct: 289 ------EKLLPHVREVGNYFKEKLKELGKGKVKGRGLMLGLELER-----ECKDYVLKAL 337
Query: 240 ERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           E+G+L   T   ++R  PPL I    +      L ++L
Sbjct: 338 EKGLLINCTAGKVLRFLPPLIIQKEHIDRAISVLREIL 375

>pdb|2PB0|A Chain A, Structure Of Biosynthetic N-Acetylornithine Aminotransferase From Salmonella Typhimurium: Studies On Substrate Specificity And Inhibitor Binding Length = 420

Iteration: 1
 Score =  152 bits (383), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 91/265 (34%), Positives = 137/265 (51%), Gaps = 6/265 (2%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGF 64
           I++    FHGR+L  +S+    +   GFGP     + V F D+ A++ +     D     
Sbjct: 149 IIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVKAVMD---DHTCAV 205
Query: 65  LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124
           + EPIQGE GV      +LK +RDLC ++  L++ DE+Q G+ R+G + A     V PD+
Sbjct: 206 VVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDI 265
Query: 125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 184
           +   KALGGG  PVSA+L  +E+      G HGST+GGNPLA AVA A+ D+I   ++ +
Sbjct: 266 LTSAKALGGG-FPVSAMLTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQ 324
Query: 185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 244
                 ++  QHL  I +QF +   ++RG GL    E  K      A D      E G++
Sbjct: 325 GIHTKRQQFVQHLQAIDEQF-DIFSDIRGMGLLIGAEL-KPKYKGRARDFLYAGAEAGVM 382
Query: 245 AKPTHDTIVRLTPPLSISSNELQEG 269
                  ++R  P L +   ++ EG
Sbjct: 383 VLNAGADVMRFAPSLVVEEADIHEG 407

>pdb|3OKS|A Chain A, Crystal Structure Of 4-Aminobutyrate Transaminase From Mycobacterium Smegmatis Length = 451

Iteration: 1
 Score =  149 bits (375), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 153/300 (51%), Gaps = 29/300 (9%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLP----GHLKVDFGDIT----------- 48
           +V+    +HGRT   ++++      + GFGP  P      L   F D             
Sbjct: 151 VVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGEL 210
Query: 49  ----ALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 103
               A+  I K+ G D +A  + EPIQGE G I+P DG+L  + D C K +++ IADE+Q
Sbjct: 211 AAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQ 270
Query: 104 SGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGN 163
           +G AR+G M A + E + PD+++    + GG +P+SAV    E+M        G T+GGN
Sbjct: 271 TGFARTGAMFACEHEGIDPDLIVTAXGIAGG-LPLSAVTGRAEIMDSPHVSGLGGTYGGN 329
Query: 164 PLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223
           P+A A A+A+++ I  E L  R+  + + ++  L ++Q +  + + +VRGRG   A+E  
Sbjct: 330 PIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAE-DDRIGDVRGRGAMIAMELV 388
Query: 224 KTALPVSAYD----ICLKMKERG--ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           K        D    +C      G  +L+  T+  +VR  PPLSI  + L EG   L +VL
Sbjct: 389 KAGTTEPDADLTKALCAGAHAAGVIVLSCGTYGNVVRFLPPLSIGDDLLNEGLDVLEEVL 448

>pdb|2EO5|A Chain A, Crystal Structure Of 4-Aminobutyrate Aminotransferase From Sulfolobus Tokodaii Strain7 Length = 419

Iteration: 1
 Score =  148 bits (374), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 153/304 (50%), Gaps = 47/304 (15%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGF-GPLLPGHLKVDFGD-------ITALEK---- 52
           I++  G FHGRT  +IS++      R   GP +PG + V + +       I   E     
Sbjct: 132 IIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSEL 191
Query: 53  -----------IFKE--SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99
                      IF      +++AG  FEPIQGE G +IPP  +   ++ L  KY IL++ 
Sbjct: 192 VNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVD 251
Query: 100 DEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGST 159
           DE+Q GL R+G++ A +     PD++ L KALGGG++P+ A +  K+  L  +PG H +T
Sbjct: 252 DEVQMGLGRTGKLFAIENFNTVPDVITLAKALGGGIMPIGATIFRKD--LDFKPGMHSNT 309
Query: 160 FGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVK----EVRGRG 215
           FGGN LA A+    +D+++D             L  H+ +I + F   ++    +VRG G
Sbjct: 310 FGGNALACAIGSKVIDIVKD-------------LLPHVNEIGKIFAEELQGLADDVRGIG 356
Query: 216 LFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHD 275
           L   +E+++  +         K   RG+L  P   + +R+ PPL IS  E ++G   L  
Sbjct: 357 LAWGLEYNEKKVRDRIIGESFK---RGLLLLPAGRSAIRVIPPLVISEEEAKQGLDILKK 413
Query: 276 VLEL 279
           V+++
Sbjct: 414 VIKV 417

>pdb|3NX3|A Chain A, Crystal Structure Of Acetylornithine Aminotransferase (Argd) From Campylobacter Jejuni Length = 395

Iteration: 1
 Score =  148 bits (373), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 142/267 (53%), Gaps = 7/267 (2%)
Query: 12  FHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQG 71
           FHGRTL A+S++ + +  + F PL+ G     + DI+++EK+  E   +    + E +QG
Sbjct: 134 FHGRTLGALSLTANEKYQKPFKPLISGVKFAKYNDISSVEKLVNE---KTCAIILESVQG 190
Query: 72  EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKAL 131
           E G+      + KA+R LC + +IL+IADEIQ G  RSG+  A +  ++ PD+    KAL
Sbjct: 191 EGGINPANKDFYKALRKLCDEKDILLIADEIQCGXGRSGKFFAYEHAQILPDIXTSAKAL 250
Query: 132 GGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGE 191
           G G+   + V+  K     ++ G+HGST+GGNPL  A   A  ++ ++EK+ E    L  
Sbjct: 251 GCGLSVGAFVINQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTP 310
Query: 192 ELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDT 251
            L Q L ++  +F ++ K+ +G G    +  DK+   V    +  K +E  +L     + 
Sbjct: 311 YLEQSLDELINEF-DFCKKRKGLGFXQGLSLDKS---VKVAKVIQKCQENALLLISCGEN 366
Query: 252 IVRLTPPLSISSNELQEGSKALHDVLE 278
            +R  PPL +    + E S+ L   L+
Sbjct: 367 DLRFLPPLILQKEHIDEXSEKLRKALK 393

>pdb|1VEF|A Chain A, Acetylornithine Aminotransferase From Thermus Thermophilus Hb8 Length = 395

Iteration: 1
 Score =  147 bits (372), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 146/273 (53%), Gaps = 11/273 (4%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGF 64
            V+    F GRT+ ++S++ + +    F PL+     + + D+ AL++   E   + A  
Sbjct: 133 FVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDE---ETAAV 189
Query: 65  LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124
           + EP+QGE GV      +L+A R++  +   L+I DEIQ+G+ R+G+  A +   + PD+
Sbjct: 190 ILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDI 249
Query: 125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 184
           + L KALGGGV P+   +  +EV   +  G HG+TFGGNPLA A  +A++  +   +L E
Sbjct: 250 LTLAKALGGGV-PLGVAVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWE 308
Query: 185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 244
           R+A LG    + L  I       ++EVRG GL   +E  + A P     I    KE  +L
Sbjct: 309 RAAELGPWFMEKLRAIPSP---KIREVRGMGLMVGLELKEKAAPY----IARLEKEHRVL 361
Query: 245 AKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           A     T++R  PPL I   +L+   +A+  VL
Sbjct: 362 ALQAGPTVIRFLPPLVIEKEDLERVVEAVRAVL 394

>pdb|4ADB|A Chain A, Structural And Functional Study Of Succinyl-ornithine Transaminase From E. Coli Length = 406

Iteration: 1
 Score =  138 bits (347), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 132/265 (49%), Gaps = 6/265 (2%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGF 64
           IV+    FHGRTL  +S        + F PL        + DI +   +     D     
Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALID---DSTCAV 187
Query: 65  LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124
           + EPIQGE GV+   + +L+ +R+LC+++N L+I DE+Q+G+ R+G + A     V PD+
Sbjct: 188 IVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDL 247
Query: 125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 184
           +   KALGGG  PV A+LA +E    +  G HG+T+GGNPLASAVA   L++I   ++  
Sbjct: 248 LTTAKALGGG-FPVGALLATEECARVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLN 306
Query: 185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 244
                 +   + L  I  ++     EVRG GL      +       A  I  +  + G++
Sbjct: 307 GVKQRHDWFVERLNTINHRY-GLFSEVRGLGLLIGCVLNAD-YAGQAKQISQEAAKAGVM 364
Query: 245 AKPTHDTIVRLTPPLSISSNELQEG 269
                  +VR  P L++S  E+  G
Sbjct: 365 VLIAGGNVVRFAPALNVSEEEVTTG 389

>pdb|3DOD|A Chain A, Crystal Structure Of Plp Bound 7,8-diaminopelargonic Acid Synthase In Bacillus Subtilis Length = 448

Iteration: 1
 Score =  137 bits (346), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 157/305 (51%), Gaps = 39/305 (12%)
Query: 12  FHGRTLAAISMSCDNEAIRGFGPLL--------PGHLKVDFGD--------ITALEKIFK 55
           +HG T+ A+S+         +GPL+        P   + + GD        +  L ++ +
Sbjct: 146 YHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLE 205
Query: 56  ESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA 114
           E  ++IA    E  +QG +G+I+ P+GYL  VR+LC+ Y++LMI DE+ +G  R+G+M A
Sbjct: 206 EHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFA 265
Query: 115 SDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC-------IQPGEHGSTFGGNPLAS 167
            + E V+PD++  GK + GG +P++   A +++          ++   HG ++ GN L  
Sbjct: 266 CEHENVQPDLMAAGKGITGGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGC 325
Query: 168 AVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF---DK 224
           AVA+ +L +   E + E+ A   ++L   L +     P +V ++R  G     E     +
Sbjct: 326 AVALENLALFESENIVEQVAEKSKKL-HFLLQDLHALP-HVGDIRQLGFMCGAELVRSKE 383
Query: 225 TALPVSA-----YDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQE----GSKALHD 275
           T  P  A     Y + LKM+E G+L +P  D I  L PPL+ ++ EL E      +A+H+
Sbjct: 384 TKEPYPADRRIGYKVSLKMRELGMLTRPLGDVIAFL-PPLASTAEELSEMVAIMKQAIHE 442
Query: 276 VLELD 280
           V  L+
Sbjct: 443 VTSLE 447

>pdb|3DU4|A Chain A, Crystal Structure Of 7-Keto-8-Aminopelargonic Acid Bound 7,8- Diaminopelargonic Acid Synthase In Bacillus Subtilis Length = 448

Iteration: 1
 Score =  137 bits (346), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 157/305 (51%), Gaps = 39/305 (12%)
Query: 12  FHGRTLAAISMSCDNEAIRGFGPLL--------PGHLKVDFGD--------ITALEKIFK 55
           +HG T+ A+S+         +GPL+        P   + + GD        +  L ++ +
Sbjct: 146 YHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQXLRELAQLLE 205
Query: 56  ESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA 114
           E  ++IA    E  +QG +G+I+ P+GYL  VR+LC+ Y++LMI DE+ +G  R+G+M A
Sbjct: 206 EHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFA 265
Query: 115 SDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC-------IQPGEHGSTFGGNPLAS 167
            + E V+PD++  GK + GG +P++   A +++          ++   HG ++ GN L  
Sbjct: 266 CEHENVQPDLMAAGKGITGGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGC 325
Query: 168 AVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF---DK 224
           AVA+ +L +   E + E+ A   ++L   L +     P +V ++R  G     E     +
Sbjct: 326 AVALENLALFESENIVEQVAEKSKKL-HFLLQDLHALP-HVGDIRQLGFMCGAELVRSKE 383
Query: 225 TALPVSA-----YDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQE----GSKALHD 275
           T  P  A     Y + LKM+E G+L +P  D I  L PPL+ ++ EL E      +A+H+
Sbjct: 384 TKEPYPADRRIGYKVSLKMRELGMLTRPLGDVIAFL-PPLASTAEELSEMVAIMKQAIHE 442
Query: 276 VLELD 280
           V  L+
Sbjct: 443 VTSLE 447

>pdb|3Q8N|A Chain A, Crystal Structure Of 4-Aminobutyrate Transaminase From Mycobacterium Smegmatis Length = 453

Iteration: 1
 Score =  134 bits (338), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 151/297 (50%), Gaps = 24/297 (8%)
Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIR-GFGPL------LPGHLKVDFGDI------- 47
           QA++V     +HGRT   ++M+  N+  + GFGP       +P       G+        
Sbjct: 156 QAVVV-FDHAYHGRTNLTMAMTAKNQPYKHGFGPFANEVYRVPTSYPFRDGETDGAAAAA 214
Query: 48  TALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 106
            AL+ I K+ G D +A  + EP+ GE G ++P  G+L A++  C+    + +ADE+Q+G 
Sbjct: 215 HALDLINKQVGADNVAAVVIEPVHGEGGFVVPAPGFLGALQKWCTDNGAVFVADEVQTGF 274
Query: 107 ARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLA 166
           AR+G + A + E V PD+++  K + GG +P+SAV    E+M   Q G  G T+GGNPLA
Sbjct: 275 ARTGALFACEHENVVPDLIVTAKGIAGG-LPLSAVTGRAEIMDGPQSGGLGGTYGGNPLA 333
Query: 167 SAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA 226
            A A+A +D I  E L  R+  +GE +   L  +    P  + EVRGRG   AVE  K  
Sbjct: 334 CAAALAVIDTIERENLVARARAIGETMLSRLGALAAADPR-IGEVRGRGAMIAVELVKPG 392
Query: 227 LPVSAYDICLKMKERG------ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
                 D+  ++          +L   T+  ++R  PPLS+  + L EG   L  V 
Sbjct: 393 TTEPDADLTKRVAAAAHAQGLVVLTCGTYGNVLRFLPPLSMPDHLLDEGLDILAAVF 449

>pdb|3R4T|A Chain A, Crystal Structure Of 4-Aminobutyrate Aminotransferase Gabt From Mycobacterium Marinum Covalently Bound To Pyridoxal Phosphate Length = 467

Iteration: 1
 Score =  134 bits (337), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 147/300 (49%), Gaps = 29/300 (9%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLPGHLKVDFG----------DIT----- 48
           +V+    +HGRT   ++++  +   + GFGP  P   +              DI      
Sbjct: 168 VVAFDYAYHGRTNLTMALTAKSMPYKSGFGPFAPEIYRAPVSYPYRDNLLDKDIATDGEL 227
Query: 49  ----ALEKIFKESGD-QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 103
               A+  I K+ G   +A  + EPI GE G I+P DG+L A++  C   +++ IADE+Q
Sbjct: 228 AAERAINLIDKQIGAANLAAVIIEPIAGEGGFIVPADGFLPALQRWCRDNDVVFIADEVQ 287
Query: 104 SGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGN 163
           +G AR+G M A D E V PD+++    +  G  P+SAV    E+M        G TFGGN
Sbjct: 288 TGFARTGAMFACDHENVEPDLIVTAXGIADG-FPLSAVTGRAEIMDAPHTSGLGGTFGGN 346
Query: 164 PLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223
           P+A A A+A+++ I  + + ER+  +   +   L ++Q    + + +VRGRG   A+E  
Sbjct: 347 PVACAAALATIETIERDGMVERARQIERLVMDRLLRLQAA-DDRLGDVRGRGAMIAMELV 405
Query: 224 K--TALPVSAYDICLKMKERG----ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           K  TA P +A    L          +L       ++RL PPL+IS   L EG   L  +L
Sbjct: 406 KSGTAEPDAALTQKLAAAAHAAGVIVLTCGMFGNVIRLLPPLTISDELLSEGLDILCQIL 465

>pdb|1SF2|A Chain A, Structure Of E. Coli Gamma-Aminobutyrate Aminotransferase Length = 426

Iteration: 1
 Score =  132 bits (333), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 151/286 (52%), Gaps = 26/286 (9%)
Query: 6   VSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLK-----------VDFGDITALEKI 53
           ++  G +HGRT   ++++   N    G G L+PGH+             +   I ++ +I
Sbjct: 132 IAFSGAYHGRTHYTLALTGKVNPYSAGMG-LMPGHVYRALYPCPLHGISEDDAIASIHRI 190
Query: 54  FKESG--DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR 111
           FK     + IA  + EP+QGE G       +++ +R LC ++ I++IADE+QSG  R+G 
Sbjct: 191 FKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGT 250
Query: 112 MLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAI 171
           + A +   V PD+    K++ GG  P++ V    EVM  + PG  G T+ GNP+A   A+
Sbjct: 251 LFAMEQMGVAPDLTTFAKSIAGG-FPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAAL 309
Query: 172 ASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF------DKT 225
             L V   E L +++  LG++L+  L  I ++ P  + +VRG G   A+E       +K 
Sbjct: 310 EVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPE-IGDVRGLGAMIAIELFEDGDHNKP 368
Query: 226 ALPVSAYDICLKMKERG--ILAKPTHDTIVRLTPPLSISSNELQEG 269
              ++A +I  + +++G  +L+   +  ++R+  PL+I   ++++G
Sbjct: 369 DAKLTA-EIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQG 413

>pdb|1SZS|A Chain A, The Structure Of Gamma-aminobutyrate Aminotransferase Mutant: I50q Length = 426

Iteration: 1
 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 151/286 (52%), Gaps = 26/286 (9%)
Query: 6   VSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLK-----------VDFGDITALEKI 53
           ++  G +HGRT   ++++   N    G G L+PGH+             +   I ++ +I
Sbjct: 132 IAFSGAYHGRTHYTLALTGKVNPYSAGMG-LMPGHVYRALYPCPLHGISEDDAIASIHRI 190
Query: 54  FKESG--DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR 111
           FK     + IA  + EP+QGE G       +++ +R LC ++ I++IADE+QSG  R+G 
Sbjct: 191 FKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGT 250
Query: 112 MLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAI 171
           + A +   V PD+    K++ GG  P++ V    EVM  + PG  G T+ GNP+A   A+
Sbjct: 251 LFAMEQMGVAPDLTTFAKSIAGG-FPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAAL 309
Query: 172 ASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF------DKT 225
             L V   E L +++  LG++L+  L  I ++ P  + +VRG G   A+E       +K 
Sbjct: 310 EVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPE-IGDVRGLGAMIAIELFEDGDHNKP 368
Query: 226 ALPVSAYDICLKMKERG--ILAKPTHDTIVRLTPPLSISSNELQEG 269
              ++A +I  + +++G  +L+   +  ++R+  PL+I   ++++G
Sbjct: 369 DAKLTA-EIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQG 413

>pdb|1SZU|A Chain A, The Structure Of Gamma-Aminobutyrate Aminotransferase Mutant: V241a Length = 426

Iteration: 1
 Score =  130 bits (328), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 150/286 (52%), Gaps = 26/286 (9%)
Query: 6   VSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLK-----------VDFGDITALEKI 53
           ++  G +HGRT   ++++   N    G G L+PGH+             +   I ++ +I
Sbjct: 132 IAFSGAYHGRTHYTLALTGKVNPYSAGMG-LMPGHVYRALYPCPLHGISEDDAIASIHRI 190
Query: 54  FKESG--DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR 111
           FK     + IA  + EP+QGE G       +++ +R LC ++ I++IADE QSG  R+G 
Sbjct: 191 FKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEAQSGAGRTGT 250
Query: 112 MLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAI 171
           + A +   V PD+    K++ GG  P++ V    EVM  + PG  G T+ GNP+A   A+
Sbjct: 251 LFAMEQMGVAPDLTTFAKSIAGG-FPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAAL 309
Query: 172 ASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF------DKT 225
             L V   E L +++  LG++L+  L  I ++ P  + +VRG G   A+E       +K 
Sbjct: 310 EVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPE-IGDVRGLGAMIAIELFEDGDHNKP 368
Query: 226 ALPVSAYDICLKMKERG--ILAKPTHDTIVRLTPPLSISSNELQEG 269
              ++A +I  + +++G  +L+   +  ++R+  PL+I   ++++G
Sbjct: 369 DAKLTA-EIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQG 413

>pdb|1SZK|A Chain A, The Structure Of Gamma-Aminobutyrate Aminotransferase Mutant: E211s Length = 426

Iteration: 1
 Score =  130 bits (327), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 150/286 (52%), Gaps = 26/286 (9%)
Query: 6   VSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLK-----------VDFGDITALEKI 53
           ++  G +HGRT   ++++   N    G G L+PGH+             +   I ++ +I
Sbjct: 132 IAFSGAYHGRTHYTLALTGKVNPYSAGMG-LMPGHVYRALYPCPLHGISEDDAIASIHRI 190
Query: 54  FKESG--DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR 111
           FK     + IA  + EP+QG  G       +++ +R LC ++ I++IADE+QSG  R+G 
Sbjct: 191 FKNDAAPEDIAAIVIEPVQGSGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGT 250
Query: 112 MLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAI 171
           + A +   V PD+    K++ GG  P++ V    EVM  + PG  G T+ GNP+A   A+
Sbjct: 251 LFAMEQMGVAPDLTTFAKSIAGG-FPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAAL 309
Query: 172 ASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF------DKT 225
             L V   E L +++  LG++L+  L  I ++ P  + +VRG G   A+E       +K 
Sbjct: 310 EVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPE-IGDVRGLGAMIAIELFEDGDHNKP 368
Query: 226 ALPVSAYDICLKMKERG--ILAKPTHDTIVRLTPPLSISSNELQEG 269
              ++A +I  + +++G  +L+   +  ++R+  PL+I   ++++G
Sbjct: 369 DAKLTA-EIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQG 413

>pdb|4FFC|A Chain A, Crystal Structure Of A 4-Aminobutyrate Aminotransferase (Gabt) From Mycobacterium Abscessus Length = 453

Iteration: 1
 Score =  125 bits (313), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 154/295 (52%), Gaps = 24/295 (8%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRG-FGPLLPGHLKV-------DFGDIT-------A 49
           +V+    +HGRT   ++++  +   +  FGP  P   ++       D   +T       A
Sbjct: 154 VVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRA 213
Query: 50  LEKIFKESGDQ-IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 108
           + +I  + G Q +A  + EPIQGE G I+P  G+L  +    S+  ++ IADE+Q+G AR
Sbjct: 214 ISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFAR 273
Query: 109 SGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASA 168
           +G   AS+ E + PD+V +   + GG +P+SAV    E+M  +  G  G T+GGNP+  A
Sbjct: 274 TGAWFASEHEGIVPDIVTMAXGIAGG-MPLSAVTGRAELMDAVYAGGLGGTYGGNPVTCA 332
Query: 169 VAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK--TA 226
            A+A+L V+R+  L  R+  +   +   L  + ++  + + EVRGRG   A+E  K  T 
Sbjct: 333 AAVAALGVMRELDLPARARAIEASVTSRLSALAEEV-DIIGEVRGRGAMLAIEIVKPGTL 391
Query: 227 LPVSAY--DICLKMKERG--ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
            P +A    I  +   +G  IL   T   ++RL PPL I  + L EG  AL D++
Sbjct: 392 EPDAALTKSIAAEALSQGVLILTCGTFGNVIRLLPPLVIGDDLLDEGITALSDII 446

>pdb|4ATP|A Chain A, Structure Of Gaba-Transaminase A1r958 From Arthrobacter Aurescens In Complex With Plp Length = 456

Iteration: 1
 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 152/299 (50%), Gaps = 34/299 (11%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLPGHLKVDFG------------------ 45
           +V+    +HGRT   ++++      +  FGP  P   ++                     
Sbjct: 154 VVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKR 213
Query: 46  DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 105
            IT +EK  +  GDQ+A  + EPIQGE G I+P +G+L A+ +   +  I+ IADE+QSG
Sbjct: 214 AITMIEK--QIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSG 271
Query: 106 LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPL 165
             R+G   A D E V PD++ + K + GG +P+SA+    +++  + PG  G T+GGNP+
Sbjct: 272 FCRTGEWFAVDHEGVVPDIITMAKGIAGG-LPLSAITGRADLLDAVHPGGLGGTYGGNPV 330
Query: 166 ASAVAIASLDVIRDEKLAERSAHLGE----ELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 221
           A A A+A++D +    L  R+ H+ E    +LR+   ++     + V ++RGRG   A+E
Sbjct: 331 ACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAIE 390
Query: 222 FDK-------TALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKAL 273
             +         L  +    CLK +   IL   T+  ++RL PPL IS   L +G + L
Sbjct: 391 LVQPGSKEPNAELTKAVAAACLK-EGVIILTCGTYGNVIRLLPPLVISDELLIDGLEVL 448

>pdb|3N5M|A Chain A, Crystals Structure Of A Bacillus Anthracis Aminotransferase Length = 452

Iteration: 1
 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 132/255 (51%), Gaps = 29/255 (11%)
Query: 37  PGHLKVDFGDITALEKIFK----ESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK 92
           PG  + +  D+  ++++ +    E  + IA F+ EPI    G++  P  Y KAV + C K
Sbjct: 188 PGIERENIYDVECVKEVDRVXTWELSETIAAFIXEPIITGGGILXAPQDYXKAVHETCQK 247
Query: 93  YNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQ 152
           +  L+I+DE+  G  R+G+       +V+PD++   K +    +P+SA    +E+    +
Sbjct: 248 HGALLISDEVICGFGRTGKAFGFXNYDVKPDIITXAKGITSAYLPLSATAVKREIYEAFK 307
Query: 153 -PGE-----HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPN 206
             GE     H +TFGGNP A A+A+ +L++I +E L ERSA  G  L + L +   + P 
Sbjct: 308 GKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQXGSLLLEQLKEEIGEHP- 366
Query: 207 YVKEVRGRGLFNAVEF---DKTALPV------SAYDICLKMKERGIL------AKPTHDT 251
            V ++RG+GL   +E     +T  P+      S  + C   KE+G++          ++ 
Sbjct: 367 LVGDIRGKGLLVGIELVNDKETKEPIDNDKIASVVNAC---KEKGLIIGRNGXTTAGYNN 423
Query: 252 IVRLTPPLSISSNEL 266
           I+ L PPL ISS E+
Sbjct: 424 ILTLAPPLVISSEEI 438

>pdb|3NUI|A Chain A, Crystal Structure Of Omega-Transferase From Vibrio Fluvialis Js17 Length = 478

Iteration: 1
 Score =  114 bits (285), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 123/249 (49%), Gaps = 22/249 (8%)
Query: 51  EKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG 110
           E I +E  D IAGF  EP+ G  GVI P  GY +A+  +  KY+I +I+DE+  G  R+G
Sbjct: 221 ETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTG 280
Query: 111 RMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV-------MLCIQPGEHGSTFGGN 163
                   +  PD +I  K L  G  P+ AV+   E+       +  I+   HG T  G+
Sbjct: 281 NTWGCVTYDFTPDAIISSKNLTAGFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGH 340
Query: 164 PLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223
           P+  A+A+ ++DV+ +E LAE    L     + L  I ++ PN + E RG G   A+E  
Sbjct: 341 PVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIAER-PN-IGEYRGIGFMWALEAV 398
Query: 224 KTALPVSAYDICLKMKER--------GILAKPTHDTIVRLTPPLSISSNELQEGSKALHD 275
           K     + +D  L + ER        G++ +P   ++V L PP  ++  ++ E    + D
Sbjct: 399 KDKASKTPFDGNLSVSERIANTCTDLGLICRPLGQSVV-LCPPFILTEAQMDE----MFD 453
Query: 276 VLELDLPKM 284
            LE  L K+
Sbjct: 454 KLEKALDKV 462

>pdb|1DTY|A Chain A, Crystal Structure Of Adenosylmethionine-8-Amino-7-Oxonanoate Aminotransferase With Pyridoxal Phosphate Cofactor. Length = 429

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 24/285 (8%)
Query: 12  FHGRTLAAISM-SCDNEAIRGFGPLLPGHL-----------KVDFGDITALEKIFKESGD 59
           +HG T  A+S+   DN     +   LP +L           + D  D+    ++      
Sbjct: 144 YHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRH 203
Query: 60  QIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118
           +IA  + EPI QG  G+ +    +LK +R +C +  IL+IADEI +G  R+G++ A +  
Sbjct: 204 EIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHA 263
Query: 119 EVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-----HGSTFGGNPLASAVAIAS 173
           E+ PD++ LGKAL GG + +SA L  +EV   I  GE     HG TF GNPLA A A AS
Sbjct: 264 EIAPDILCLGKALTGGTMTLSATLTTREVAETISDGEAGCFMHGPTFMGNPLACAAANAS 323
Query: 174 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYD 233
           L ++      ++ A +  +LR+ L   +      V +VR  G    VE   T  PV+   
Sbjct: 324 LAILESGDWQQQVADIEVQLREQLAPARDA--EMVADVRVLGAIGVVE---TTHPVNMAA 378
Query: 234 ICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           +     E+G+  +P    ++ L PP  I   +LQ  + A++  ++
Sbjct: 379 LQKFFVEQGVWIRP-FGKLIYLMPPYIILPQQLQRLTAAVNRAVQ 422

>pdb|1DGD|A Chain A, An Alkali Metal Ion Size-Dependent Switch In The Active Site Structure Of Dialkylglycine Decarboxylase Length = 432

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 126/245 (51%), Gaps = 21/245 (8%)
Query: 49  ALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 108
           A + I ++S   +A F+ EPI    G+I  PDGY+ A++  C    +L+I DE Q+G+ R
Sbjct: 191 AFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGR 250
Query: 109 SGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHG------STFGG 162
           +G M A   + V PD++ L K LG G +P++A++        I+   H       +T   
Sbjct: 251 TGTMFACQRDGVTPDILTLSKTLGAG-LPLAAIVTSA----AIEERAHELGYLFYTTHVS 305
Query: 163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 222
           +PL +AV +  LDV++ + L  R+  +G+ LR+ L  + ++F + + +VRGRGL   VE 
Sbjct: 306 DPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERF-DCIGDVRGRGLLLGVEI 364
Query: 223 DK---TALPVSAYDI-----CLKMK-ERGILAKPTHDTIVRLTPPLSISSNELQEGSKAL 273
            K   T  P           C+ +     I+  P    + R+ PPL++S +E+  G   L
Sbjct: 365 VKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLL 424
Query: 274 HDVLE 278
              +E
Sbjct: 425 GQAIE 429

>pdb|1QJ3|A Chain A, Crystal Structure Of 7,8-Diaminopelargonic Acid Synthase In Complex With 7-Keto-8-Aminopelargonic Acid Length = 429

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 141/285 (49%), Gaps = 24/285 (8%)
Query: 12  FHGRTLAAISM-SCDNEAIRGFGPLLPGHL-----------KVDFGDITALEKIFKESGD 59
           +HG T  A+S+   DN     +   LP +L           + D  D+    ++      
Sbjct: 144 YHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRH 203
Query: 60  QIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118
           +IA  + EPI QG  G+ +    +LK +R +C +  IL+IADEI +G  R+G++ A +  
Sbjct: 204 EIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHA 263
Query: 119 EVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-----HGSTFGGNPLASAVAIAS 173
           E+ PD++ LGKAL GG + +SA L  +EV   I  GE     HG TF GNPLA A A AS
Sbjct: 264 EIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANAS 323
Query: 174 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYD 233
           L ++      ++ A +  +LR+ L   +      V +VR  G    VE   T  PV+   
Sbjct: 324 LAILESGDWQQQVADIEVQLREQLAPARD--AEMVADVRVLGAIGVVE---TTHPVNMAA 378
Query: 234 ICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           +     E+G+  +P    ++ L PP  I   +LQ  + A++  ++
Sbjct: 379 LQKFFVEQGVWIRP-FGKLIYLMPPYIILPQQLQRLTAAVNRAVQ 422

>pdb|1D7R|A Chain A, Crystal Structure Of The Complex Of 2,2-Dialkylglycine Decarboxylase With 5pa Length = 433

Iteration: 1
 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 126/245 (51%), Gaps = 21/245 (8%)
Query: 49  ALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 108
           A + I ++S   +A F+ EPI    G+I  PDGY+ A++  C    +L+I DE Q+G+ R
Sbjct: 192 AFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGR 251
Query: 109 SGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHG------STFGG 162
           +G M A   + V PD++ L K LG G +P++A++        I+   H       +T   
Sbjct: 252 TGTMFACQRDGVTPDILTLSKTLGAG-LPLAAIVTSA----AIEERAHELGYLFYTTHVS 306
Query: 163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 222
           +PL +AV +  LDV++ + L  R+  +G+ LR+ L  + ++F + + +VRGRGL   VE 
Sbjct: 307 DPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERF-DCIGDVRGRGLLLGVEI 365
Query: 223 DK---TALPVSAYDI-----CLKMK-ERGILAKPTHDTIVRLTPPLSISSNELQEGSKAL 273
            K   T  P           C+ +     I+  P    + R+ PPL++S +E+  G   L
Sbjct: 366 VKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLL 425
Query: 274 HDVLE 278
              +E
Sbjct: 426 GQAIE 430

>pdb|1M0N|A Chain A, Structure Of Dialkylglycine Decarboxylase Complexed With 1- Aminocyclopentanephosphonate Length = 433

Iteration: 1
 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 145/307 (47%), Gaps = 40/307 (13%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKV--------------DFGDITAL 50
           IV     +HG T AA S +  +   +G GP   G   +               +  +  L
Sbjct: 131 IVGFAQSWHGMTGAAASATY-SAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAEL 189
Query: 51  EKIF----KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 106
           +  F    ++S   +A F+ EPI    G+I  PDGY+ A++  C    +L+I DE Q+G+
Sbjct: 190 DYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGV 249
Query: 107 ARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHG------STF 160
            R+G M A   + V PD++ L K LG G +P++A++        I+   H       +T 
Sbjct: 250 GRTGTMFACQRDGVTPDILTLSKTLGAG-LPLAAIVTSA----AIEERAHELGYLFYTTH 304
Query: 161 GGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV 220
             +PL +AV +  LDV++ + L  R+  +G+ LR+ L  + ++F + + +VRGRGL   V
Sbjct: 305 VSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERF-DCIGDVRGRGLLLGV 363
Query: 221 EFDK---TALPVSAYDI-----CLKMK-ERGILAKPTHDTIVRLTPPLSISSNELQEGSK 271
           E  K   T  P           C+ +     I+  P    + R+ PPL++S +E+  G  
Sbjct: 364 EIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLS 423
Query: 272 ALHDVLE 278
            L   +E
Sbjct: 424 LLGQAIE 430

>pdb|1Z3Z|A Chain A, The Crystal Structure Of A Dgd Mutant: Q52a Length = 431

Iteration: 1
 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 126/245 (51%), Gaps = 21/245 (8%)
Query: 49  ALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 108
           A + I ++S   +A F+ EPI    G+I  PDGY+ A++  C    +L+I DE Q+G+ R
Sbjct: 190 AFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGR 249
Query: 109 SGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHG------STFGG 162
           +G M A   + V PD++ L K LG G +P++A++        I+   H       +T   
Sbjct: 250 TGTMFACQRDGVTPDILTLSKTLGAG-LPLAAIVTSA----AIEERAHELGYLFYTTHVS 304
Query: 163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF 222
           +PL +AV +  LDV++ + L  R+  +G+ LR+ L  + ++F + + +VRGRGL   VE 
Sbjct: 305 DPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERF-DCIGDVRGRGLLLGVEI 363
Query: 223 DK---TALPVSAYDI-----CLKMK-ERGILAKPTHDTIVRLTPPLSISSNELQEGSKAL 273
            K   T  P           C+ +     I+  P    + R+ PPL++S +E+  G   L
Sbjct: 364 VKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLL 423
Query: 274 HDVLE 278
              +E
Sbjct: 424 GQAIE 428

>pdb|1S09|A Chain A, Crystal Structure Of The Y144f Mutant Of 7,8- Diaminopelargonic Acid Synthase Length = 429

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 140/285 (49%), Gaps = 24/285 (8%)
Query: 12  FHGRTLAAISM-SCDNEAIRGFGPLLPGHL-----------KVDFGDITALEKIFKESGD 59
           FHG T  A+S+   DN     +   LP +L           + D  D+    ++      
Sbjct: 144 FHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRH 203
Query: 60  QIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118
           +IA  + EPI QG  G+ +    +LK +R +C +  IL+IADEI +G  R+G++ A +  
Sbjct: 204 EIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHA 263
Query: 119 EVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-----HGSTFGGNPLASAVAIAS 173
           E+ PD++ LG AL GG + +SA L  +EV   I  GE     HG TF GNPLA A A AS
Sbjct: 264 EIAPDILCLGXALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANAS 323
Query: 174 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYD 233
           L ++      ++ A +  +LR+ L   +      V +VR  G    VE   T  PV+   
Sbjct: 324 LAILESGDWQQQVADIEVQLREQLAPARD--AEMVADVRVLGAIGVVE---TTHPVNMAA 378
Query: 234 ICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           +     E+G+  +P    ++ L PP  I   +LQ  + A++  ++
Sbjct: 379 LQKFFVEQGVWIRP-FGKLIYLMPPYIILPQQLQRLTAAVNRAVQ 422

>pdb|4E3Q|A Chain A, Pmp-Bound Form Of Aminotransferase Crystal Structure From Vibrio Fluvialis Length = 473

Iteration: 1
 Score =  112 bits (279), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 18/243 (7%)
Query: 51  EKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG 110
           E I +E  D IAGF  EP+ G  GVI P  GY +A+  +  KY+I +I+DE+  G  R+G
Sbjct: 227 ETIQREGADTIAGFFAEPVXGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTG 286
Query: 111 RMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV-------MLCIQPGEHGSTFGGN 163
                   +  PD +I  K L  G  P  AV+   E+       +  I+   HG T  G+
Sbjct: 287 NTWGCVTYDFTPDAIISSKNLTAGFFPXGAVILGPELSKRLETAIEAIEEFPHGFTASGH 346
Query: 164 PLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223
           P+  A+A+ ++DV+ +E LAE    L     + L  I ++ PN + E RG G   A+E  
Sbjct: 347 PVGCAIALKAIDVVXNEGLAENVRRLAPRFEERLKHIAER-PN-IGEYRGIGFXWALEAV 404
Query: 224 KTALPVSAYDICLKMKER--------GILAKPTHDTIVRLTPPLSISSNELQEGSKALHD 275
           K     + +D  L + ER        G++ +P   ++V L PP  ++  +  E    L  
Sbjct: 405 KDKASKTPFDGNLSVSERIANTCTDLGLICRPLGQSVV-LCPPFILTEAQXDEXFDKLEK 463
Query: 276 VLE 278
            L+
Sbjct: 464 ALD 466

>pdb|1MGV|A Chain A, Crystal Structure Of The R391a Mutant Of 7,8-Diaminopelargonic Acid Synthase Length = 429

Iteration: 1
 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 140/285 (49%), Gaps = 24/285 (8%)
Query: 12  FHGRTLAAISM-SCDNEAIRGFGPLLPGHL-----------KVDFGDITALEKIFKESGD 59
           +HG T  A+S+   DN     +   LP +L           + D  D+    ++      
Sbjct: 144 YHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRH 203
Query: 60  QIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118
           +IA  + EPI QG  G+ +    +LK +R +C +  IL+IADEI +G  R+G++ A +  
Sbjct: 204 EIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHA 263
Query: 119 EVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-----HGSTFGGNPLASAVAIAS 173
           E+ PD++ LGKAL GG + +SA L  +EV   I  GE     HG TF GNPLA A A AS
Sbjct: 264 EIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANAS 323
Query: 174 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYD 233
           L ++      ++ A +  +LR+ L   +      V +VR  G    VE   T  PV+   
Sbjct: 324 LAILESGDWQQQVADIEVQLREQLAPARD--AEMVADVRVLGAIGVVE---TTHPVNMAA 378
Query: 234 ICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           +     E+G+   P    ++ L PP  I   +LQ  + A++  ++
Sbjct: 379 LQKFFVEQGVWIAP-FGKLIYLMPPYIILPQQLQRLTAAVNRAVQ 422

>pdb|1S08|A Chain A, Crystal Structure Of The D147n Mutant Of 7,8- Diaminopelargonic Acid Synthase Length = 429

Iteration: 1
 Score =  111 bits (278), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 140/285 (49%), Gaps = 24/285 (8%)
Query: 12  FHGRTLAAISM-SCDNEAIRGFGPLLPGHL-----------KVDFGDITALEKIFKESGD 59
           +HG T  A+S+   DN     +   LP +L           + D  D+    ++      
Sbjct: 144 YHGNTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRH 203
Query: 60  QIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118
           +IA  + EPI QG  G+ +    +LK +R +C +  IL+IADEI +G  R+G++ A +  
Sbjct: 204 EIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHA 263
Query: 119 EVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-----HGSTFGGNPLASAVAIAS 173
           E+ PD++ LG AL GG + +SA L  +EV   I  GE     HG TF GNPLA A A AS
Sbjct: 264 EIAPDILCLGXALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANAS 323
Query: 174 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYD 233
           L ++      ++ A +  +LR+ L   +      V +VR  G    VE   T  PV+   
Sbjct: 324 LAILESGDWQQQVADIEVQLREQLAPARD--AEMVADVRVLGAIGVVE---TTHPVNMAA 378
Query: 234 ICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           +     E+G+  +P    ++ L PP  I   +LQ  + A++  ++
Sbjct: 379 LQKFFVEQGVWIRP-FGKLIYLMPPYIILPQQLQRLTAAVNRAVQ 422

>pdb|4GRX|A Chain A, Structure Of An Omega-Aminotransferase From Paracoccus Denitrificans Length = 465

Iteration: 1
 Score =  111 bits (277), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 139/308 (45%), Gaps = 38/308 (12%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD------FGDITALEKIF---- 54
           I++    +HG T  + SM+        FG  LPG + +       +G+    E  F    
Sbjct: 155 ILTRWNAYHGVTAVSASMT-GKPYNSVFGLPLPGFIHLTCPHYWRYGEEGETEAQFVARL 213
Query: 55  ---------KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 105
                    +E  D IAGF  EP+ G  GVI P  GY +A+  +  KY+I MI+DE+  G
Sbjct: 214 ARELEDTITREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPMISDEVICG 273
Query: 106 LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV-------MLCIQPGEHGS 158
             R+G        +  PD +I    L  G  P+ AV+   ++       +  I+   HG 
Sbjct: 274 FGRTGNTWGCLTYDFMPDAIISSXNLTAGFFPMGAVILGPDLAKRVEAAVEAIEEFPHGF 333
Query: 159 TFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN 218
           T  G+P+  A+A+ ++DV+ +E LAE    L       L +I  + PN + E RG G   
Sbjct: 334 TASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEAGLKRIADR-PN-IGEYRGIGFMW 391
Query: 219 AVEFDKTALPVSAYDICLKMKER--------GILAKPTHDTIVRLTPPLSISSNELQEGS 270
           A+E  K     + +D  L + ER        G++ +P   +IV L PP  ++  ++ E  
Sbjct: 392 ALEAVKDKPTKTPFDANLSVSERIANTCTDLGLICRPLGQSIV-LCPPFILTEAQMDEMF 450
Query: 271 KALHDVLE 278
           + L   L+
Sbjct: 451 EKLEKALD 458

>pdb|4E3R|A Chain A, Plp-Bound Aminotransferase Mutant Crystal Structure From Vibrio Fluvialis Length = 473

Iteration: 1
 Score =  110 bits (276), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 121/249 (48%), Gaps = 22/249 (8%)
Query: 51  EKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG 110
           E I +E  D IAGF  EP+ G  GVI P  GY +A+  +  KY+I +I+DE+  G  R+G
Sbjct: 227 ETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVVCGFGRTG 286
Query: 111 RMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV-------MLCIQPGEHGSTFGGN 163
                   +  PD +I    L  G  P+ AV+   E+       +  I+   HG T  G+
Sbjct: 287 NTWGCVTYDFTPDAIISSXNLTAGFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGH 346
Query: 164 PLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223
           P+  A+A+ ++DV+ +E LAE    L     + L  I ++ PN + E RG G   A+E  
Sbjct: 347 PVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIAER-PN-IGEYRGIGFMWALEAV 404
Query: 224 KTALPVSAYDICLKMKER--------GILAKPTHDTIVRLTPPLSISSNELQEGSKALHD 275
           K     + +D  L + ER        G++  P   ++V L PP  ++  ++ E    + D
Sbjct: 405 KDKASKTPFDGNLSVSERIANTCTDLGLICFPLGQSVV-LCPPFILTEAQMDE----MFD 459
Query: 276 VLELDLPKM 284
            LE  L K+
Sbjct: 460 KLEKALDKV 468

>pdb|1S0A|A Chain A, Crystal Structure Of The Y17f Mutant Of 7,8- Diaminopelargonic Acid Synthase Length = 429

Iteration: 1
 Score =  110 bits (276), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 140/285 (49%), Gaps = 24/285 (8%)
Query: 12  FHGRTLAAISM-SCDNEAIRGFGPLLPGHL-----------KVDFGDITALEKIFKESGD 59
           +HG T  A+S+   DN     +   LP +L           + D  D+    ++      
Sbjct: 144 YHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRH 203
Query: 60  QIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118
           +IA  + EPI QG  G+ +    +LK +R +C +  IL+IADEI +G  R+G++ A +  
Sbjct: 204 EIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHA 263
Query: 119 EVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-----HGSTFGGNPLASAVAIAS 173
           E+ PD++ LG AL GG + +SA L  +EV   I  GE     HG TF GNPLA A A AS
Sbjct: 264 EIAPDILCLGXALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANAS 323
Query: 174 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYD 233
           L ++      ++ A +  +LR+ L   +      V +VR  G    VE   T  PV+   
Sbjct: 324 LAILESGDWQQQVADIEVQLREQLAPARD--AEMVADVRVLGAIGVVE---TTHPVNMAA 378
Query: 234 ICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           +     E+G+  +P    ++ L PP  I   +LQ  + A++  ++
Sbjct: 379 LQKFFVEQGVWIRP-FGKLIYLMPPYIILPQQLQRLTAAVNRAVQ 422

>pdb|3TFT|A Chain A, Crystal Structure Of 7,8-Diaminopelargonic Acid Synthase (Bioa) From Mycobacterium Tuberculosis, Pre-Reaction Complex With A 3,6- Dihydropyrid-2-One Heterocycle Inhibitor Length = 457

Iteration: 1
 Score =  110 bits (275), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 137/291 (47%), Gaps = 24/291 (8%)
Query: 5   IVSCCGCFHGRTLAAIS----------MSCDNEAIRGFGPLLPGHLKVDFGDITALEKIF 54
           +++  G +HG T  A+S          +  D  A + F P +P     D     A E   
Sbjct: 170 LMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVP--RDYDPAYSAAFEAQL 227
Query: 55  KESGDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 113
            +   ++A  + EP+ QG  G+      YL  +RD+C +Y +L+I DEI +G  R+G + 
Sbjct: 228 AQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALF 287
Query: 114 ASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-----HGSTFGGNPLASA 168
           A+D   V PD++ +GKAL GG + ++A L   +V   I  G      HG TF  NPLA A
Sbjct: 288 AADHAGVSPDIMCVGKALTGGYLSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACA 347
Query: 169 VAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP 228
           V++AS++++  +    R   L   L   L    +  P  V +VR  G    +E D+   P
Sbjct: 348 VSVASVELLLGQDWRTRITELAAGLTAGL-DTARALPA-VTDVRVCGAIGVIECDR---P 402
Query: 229 VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLEL 279
           V          +RG+  +P  + +V   PP   +  E+ + + A+ +V  L
Sbjct: 403 VDLAVATPAALDRGVWLRPFRN-LVYAMPPYICTPAEITQITSAMVEVARL 452

>pdb|1S07|A Chain A, Crystal Structure Of The R253a Mutant Of 7,8-Diaminopelargonic Acid Synthase Length = 429

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 140/285 (49%), Gaps = 24/285 (8%)
Query: 12  FHGRTLAAISM-SCDNEAIRGFGPLLPGHL-----------KVDFGDITALEKIFKESGD 59
           +HG T  A+S+   DN     +   LP +L           + D  D+    ++      
Sbjct: 144 YHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRH 203
Query: 60  QIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118
           +IA  + EPI QG  G+ +    +LK +R +C +  IL+IADEI +G   +G++ A +  
Sbjct: 204 EIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGATGKLFACEHA 263
Query: 119 EVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-----HGSTFGGNPLASAVAIAS 173
           E+ PD++ LGKAL GG + +SA L  +EV   I  GE     HG TF GNPLA A A AS
Sbjct: 264 EIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANAS 323
Query: 174 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYD 233
           L ++      ++ A +  +LR+ L   +      V +VR  G    VE   T  PV+   
Sbjct: 324 LAILESGDWQQQVADIEVQLREQLAPARD--AEMVADVRVLGAIGVVE---TTHPVNMAA 378
Query: 234 ICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           +     E+G+  +P    ++ L PP  I   +LQ  + A++  ++
Sbjct: 379 LQKFFVEQGVWIRP-FGKLIYLMPPYIILPQQLQRLTAAVNRAVQ 422

>pdb|1S06|A Chain A, Crystal Structure Of The R253k Mutant Of 7,8- Diaminopelargonic Acid Synthase Length = 429

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 140/285 (49%), Gaps = 24/285 (8%)
Query: 12  FHGRTLAAISM-SCDNEAIRGFGPLLPGHL-----------KVDFGDITALEKIFKESGD 59
           +HG T  A+S+   DN     +   LP +L           + D  D+    ++      
Sbjct: 144 YHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRH 203
Query: 60  QIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118
           +IA  + EPI QG  G+ +    +LK +R +C +  IL+IADEI +G  ++G++ A +  
Sbjct: 204 EIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGKTGKLFACEHA 263
Query: 119 EVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-----HGSTFGGNPLASAVAIAS 173
           E+ PD++ LG AL GG + +SA L  +EV   I  GE     HG TF GNPLA A A AS
Sbjct: 264 EIAPDILCLGXALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANAS 323
Query: 174 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYD 233
           L ++      ++ A +  +LR+ L   +      V +VR  G    VE   T  PV+   
Sbjct: 324 LAILESGDWQQQVADIEVQLREQLAPARD--AEMVADVRVLGAIGVVE---TTHPVNMAA 378
Query: 234 ICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           +     E+G+  +P    ++ L PP  I   +LQ  + A++  ++
Sbjct: 379 LQKFFVEQGVWIRP-FGKLIYLMPPYIILPQQLQRLTAAVNRAVQ 422

>pdb|3BV0|A Chain A, Crystal Structure Of Plp Bound 7,8-Diaminopelargonic Acid Synthase In Mycobacterium Tuberculosis Length = 437

Iteration: 1
 Score =  107 bits (268), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 137/291 (47%), Gaps = 24/291 (8%)
Query: 5   IVSCCGCFHGRTLAAIS----------MSCDNEAIRGFGPLLPGHLKVDFGDITALEKIF 54
           +++  G +HG T  A+S          +  D  A + F P +P     D     A E   
Sbjct: 150 LMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVP--RDYDPAYSAAFEAQL 207
Query: 55  KESGDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 113
            +   ++A  + EP+ QG  G+      YL  +RD+C +Y +L+I DEI +G  R+G + 
Sbjct: 208 AQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALF 267
Query: 114 ASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS-----TFGGNPLASA 168
           A+D   V PD++ +GKAL GG + ++A L   +V   I  G  G+     TF  NPLA A
Sbjct: 268 AADHAGVSPDIMCVGKALTGGYLSLAATLCTADVAHTISAGAAGALMRGPTFMANPLACA 327
Query: 169 VAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP 228
           V++AS++++  +    R   L   L   L    +  P  V +VR  G    +E D+   P
Sbjct: 328 VSVASVELLLGQDWRTRITELAAGLTAGL-DTARALPA-VTDVRVCGAIGVIECDR---P 382
Query: 229 VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLEL 279
           V          +RG+  +P  + +V   PP   +  E+ + + A+ +V  L
Sbjct: 383 VDLAVATPAALDRGVWLRPFRN-LVYAMPPYICTPAEITQITSAMVEVARL 432

>pdb|3LV2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis 7,8-Diaminopelargonic Acid Synthase In Complex With Substrate Analog Sinefungin Length = 462

Iteration: 1
 Score =  107 bits (268), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 137/291 (47%), Gaps = 24/291 (8%)
Query: 5   IVSCCGCFHGRTLAAIS----------MSCDNEAIRGFGPLLPGHLKVDFGDITALEKIF 54
           +++  G +HG T  A+S          +  D  A + F P +P     D     A E   
Sbjct: 175 LMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVP--RDYDPAYSAAFEAQL 232
Query: 55  KESGDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 113
            +   ++A  + EP+ QG  G+      YL  +RD+C +Y +L+I DEI +G  R+G + 
Sbjct: 233 AQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALF 292
Query: 114 ASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS-----TFGGNPLASA 168
           A+D   V PD++ +GKAL GG + ++A L   +V   I  G  G+     TF  NPLA A
Sbjct: 293 AADHAGVSPDIMCVGKALTGGYLSLAATLCTADVAHTISAGAAGALMRGPTFMANPLACA 352
Query: 169 VAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP 228
           V++AS++++  +    R   L   L   L    +  P  V +VR  G    +E D+   P
Sbjct: 353 VSVASVELLLGQDWRTRITELAAGLTAGL-DTARALPA-VTDVRVCGAIGVIECDR---P 407
Query: 229 VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLEL 279
           V          +RG+  +P  + +V   PP   +  E+ + + A+ +V  L
Sbjct: 408 VDLAVATPAALDRGVWLRPFRN-LVYAMPPYICTPAEITQITSAMVEVARL 457

>pdb|3I4J|A Chain A, Crystal Structure Of Aminotransferase, Class Iii From Deinococcus Radiodurans Length = 430

Iteration: 1
 Score =  104 bits (259), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 137/292 (46%), Gaps = 31/292 (10%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLL----------PGHLKVDFGDITALEKIF 54
           +++    +HG +L +++ S        + PL+          P   +    D   L  + 
Sbjct: 124 VITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALL 183
Query: 55  KESG-DQIAGFLFEPIQGEA-GVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM 112
           +  G + +A F+ EP+ G +   + P  GY + VRD+C +  I+ IADE+ SG+ R G  
Sbjct: 184 EREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSP 243
Query: 113 LA-SDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE----HGSTFGGNPLAS 167
           LA S W  V PD+ +LGK L  G  P++ +LA  +V   +  G     HG T+ G+P++ 
Sbjct: 244 LALSRWSGVTPDIAVLGKGLAAGYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSV 303
Query: 168 AVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA- 226
           A  ++ LD++  E L   +   G +L   L  +Q +FP  + +VRG GL   V     A 
Sbjct: 304 AAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQ-MMQVRGTGLLLGVVLGDLAT 362
Query: 227 -----LPVSAYDICLKMKERGILAKPTHDT-------IVRLTPPLSISSNEL 266
                 P  A  I     +RG++  P            + L PPLSI++ E+
Sbjct: 363 GQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEV 414

>pdb|2JJF|A Chain A, N328a Mutant Of M. Tuberculosis Rv3290c Length = 449

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 128/300 (42%), Gaps = 41/300 (13%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITA--------------- 49
           ++   G FHGR+   +S++     I    P      K D+  I A               
Sbjct: 160 VLHLRGAFHGRSGYTLSLTNTKPTITARFP------KFDWPRIDAPYMRPGLDEPAMAAL 213
Query: 50  -------LEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 102
                      F+     IA F+ EPIQGE G       +  A+R+LC +++ L+I DE+
Sbjct: 214 EAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEV 273
Query: 103 QSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV-----MLCIQPGEHG 157
           Q+G   +G   A    +V PD+V  GK        V  V+A + V      +   P    
Sbjct: 274 QTGCGLTGTAWAYQQLDVAPDIVAFGKK-----TQVCGVMAGRRVDEVADNVFAVPSRLA 328
Query: 158 STFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 217
           ST+GGN      A   L+VI  E L ER+   G+ LR  L ++   FP  V + RGRGL 
Sbjct: 329 STWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLM 388
Query: 218 NAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
            A     TA      ++  ++ +R ++  P     VR  PPL++S+ E+     A+   L
Sbjct: 389 CAFSLPTTA---DRDELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSAL 445

>pdb|2CIN|A Chain A, Lysine Aminotransferase From M. Tuberculosis In The Internal Aldimine Form Length = 449

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 128/300 (42%), Gaps = 41/300 (13%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITA--------------- 49
           ++   G FHGR+   +S++     I    P      K D+  I A               
Sbjct: 160 VLHLRGAFHGRSGYTLSLTNTKPTITARFP------KFDWPRIDAPYMRPGLDEPAMAAL 213
Query: 50  -------LEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 102
                      F+     IA F+ EPIQGE G       +  A+R+LC +++ L+I DE+
Sbjct: 214 EAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEV 273
Query: 103 QSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV-----MLCIQPGEHG 157
           Q+G   +G   A    +V PD+V  GK        V  V+A + V      +   P    
Sbjct: 274 QTGCGLTGTAWAYQQLDVAPDIVAFGKK-----TQVCGVMAGRRVDEVADNVFAVPSRLN 328
Query: 158 STFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 217
           ST+GGN      A   L+VI  E L ER+   G+ LR  L ++   FP  V + RGRGL 
Sbjct: 329 STWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLM 388
Query: 218 NAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
            A     TA      ++  ++ +R ++  P     VR  PPL++S+ E+     A+   L
Sbjct: 389 CAFSLPTTA---DRDELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSAL 445

>pdb|4A6R|A Chain A, Crystal Structure Of The Omega Transaminase From Chromobacterium Violaceum In The Apo Form, Crystallised From Polyacrylic Acid Length = 459

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 120/241 (49%), Gaps = 17/241 (7%)
Query: 43  DFGDITAL---EKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99
           +FG + A    EKI +   D++A F+ EPIQG  GVI+PP  Y   +  +C KY++L++A
Sbjct: 199 EFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVA 258
Query: 100 DEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG---EH 156
           DE+  G  R+G          +PD+    K L  G +P+ AV   K V   +  G    H
Sbjct: 259 DEVICGFGRTGEWFGHQHFGFQPDLFTAAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNH 318
Query: 157 GSTFGGNPLASAVAIASLDVIRDEKLAER-SAHLGEELRQHLFKIQQQFPNYVKEVRGRG 215
           G T+ G+P+ +AVA A++  +RDE + +R    +G  +++   +   +F  +V +VRG G
Sbjct: 319 GFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRF-EHVDDVRGVG 377
Query: 216 LFNAVEFDKTALPVSAY-------DICLKMKER-GILAKPTHDTIVRLTPPLSISSNELQ 267
           +  A    K       +        +C  +  R  ++ +   D IV   PPL ++  E+ 
Sbjct: 378 MVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACGDHIVS-APPLVMTRAEVD 436
Query: 268 E 268
           E
Sbjct: 437 E 437

>pdb|2JJE|A Chain A, Crystal Structure Of T330s Mutant Of Rv3290c From M. Tuberculosis Length = 449

Iteration: 1
 Score =  101 bits (251), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 128/300 (42%), Gaps = 41/300 (13%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITA--------------- 49
           ++   G FHGR+   +S++     I    P      K D+  I A               
Sbjct: 160 VLHLRGAFHGRSGYTLSLTNTKPTITARFP------KFDWPRIDAPYMRPGLDEPAMAAL 213
Query: 50  -------LEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 102
                      F+     IA F+ EPIQGE G       +  A+R+LC +++ L+I DE+
Sbjct: 214 EAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEV 273
Query: 103 QSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV-----MLCIQPGEHG 157
           Q+G   +G   A    +V PD+V  GK        V  V+A + V      +   P    
Sbjct: 274 QTGCGLTGTAWAYQQLDVAPDIVAFGKK-----TQVCGVMAGRRVDEVADNVFAVPSRLN 328
Query: 158 STFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 217
           S++GGN      A   L+VI  E L ER+   G+ LR  L ++   FP  V + RGRGL 
Sbjct: 329 SSWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLM 388
Query: 218 NAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
            A     TA      ++  ++ +R ++  P     VR  PPL++S+ E+     A+   L
Sbjct: 389 CAFSLPTTA---DRDELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSAL 445

>pdb|2JJH|A Chain A, E243 Mutant Of M. Tuberculosis Rv3290c Length = 449

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 127/300 (42%), Gaps = 41/300 (13%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITA--------------- 49
           ++   G FHGR+   +S++     I    P      K D+  I A               
Sbjct: 160 VLHLRGAFHGRSGYTLSLTNTKPTITARFP------KFDWPRIDAPYMRPGLDEPAMAAL 213
Query: 50  -------LEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 102
                      F+     IA F+ EPIQG  G       +  A+R+LC +++ L+I DE+
Sbjct: 214 EAEALRQARAAFETRPHDIACFVAEPIQGAGGDRHFRPEFFAAMRELCDEFDALLIFDEV 273
Query: 103 QSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV-----MLCIQPGEHG 157
           Q+G   +G   A    +V PD+V  GK        V  V+A + V      +   P    
Sbjct: 274 QTGCGLTGTAWAYQQLDVAPDIVAFGKK-----TQVCGVMAGRRVDEVADNVFAVPSRLN 328
Query: 158 STFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF 217
           ST+GGN      A   L+VI  E L ER+   G+ LR  L ++   FP  V + RGRGL 
Sbjct: 329 STWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLM 388
Query: 218 NAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
            A     TA      ++  ++ +R ++  P     VR  PPL++S+ E+     A+   L
Sbjct: 389 CAFSLPTTA---DRDELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSAL 445

>pdb|3I5T|A Chain A, Crystal Structure Of Aminotransferase Prk07036 From Rhodobacter Sphaeroides Kd131 Length = 476

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 115/227 (50%), Gaps = 21/227 (9%)
Query: 59  DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118
           D IA FL EPI    GVIIPP GY    + +C K++IL I+DE+ +G  R G   AS+  
Sbjct: 220 DTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKV 279
Query: 119 -EVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE--------HGSTFGGNPLASAV 169
             V PD++   K +  G +P+   LA  E +L    GE        +G T+   P+A A 
Sbjct: 280 FGVVPDIITFAKGVTSGYVPLGG-LAISEAVLARISGENAKGSWFTNGYTYSNQPVACAA 338
Query: 170 AIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE--FDKTAL 227
           A+A+++++  E + +++  + +     L  + +  P  V E R  GL   V+   D T  
Sbjct: 339 ALANIELMEREGIVDQAREMADYFAAALASL-RDLPG-VAETRSVGLVGCVQCLLDPTRA 396
Query: 228 PVSAYD--ICLKMKER----GILAKPTHDTIVRLTPPLSISSNELQE 268
             +A D    LK+ ER    G++ +P  D  V ++PPL IS  ++ E
Sbjct: 397 DGTAEDKAFTLKIDERCFELGLIVRPLGDLCV-ISPPLIISRAQIDE 442

>pdb|3HMU|A Chain A, Crystal Structure Of A Class Iii Aminotransferase From Silicibacter Pomeroyi Length = 472

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 78/134 (58%), Gaps = 2/134 (1%)
Query: 51  EKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG 110
           E I +   +++A F+ EP+QG  GVI+ PD Y   ++ +C KY+IL+IADE+  G  R+G
Sbjct: 214 EAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTG 273
Query: 111 RMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE--HGSTFGGNPLASA 168
               +    +RP ++ + K L  G  P+   +   EV   I   E  HG T+ G+P+A+A
Sbjct: 274 NWFGTQTMGIRPHIMTIAKGLSSGYAPIGGSIVCDEVAHVIGKDEFNHGYTYSGHPVAAA 333
Query: 169 VAIASLDVIRDEKL 182
           VA+ +L ++ +E +
Sbjct: 334 VALENLRILEEENI 347

>pdb|3DXW|A Chain A, The Crystal Structure Of Alpha-Amino-Epsilon-Caprolactam Racemase From Achromobacter Obae Complexed With Epsilon Caprolactam Length = 452

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 33/289 (11%)
Query: 5   IVSCCGCFHGRTLAAISMS---CDNEAIRGFGPLL---PGHLKVDFGDITA-------LE 51
           +++  G +HG T+ +++ S      +A +  G +L   P   +    D T         E
Sbjct: 146 VIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTE 205
Query: 52  KIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR 111
           K+       I     EPIQ + G+I+PPDG+L+   D+C  + IL++ DE++ GLARSGR
Sbjct: 206 KLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGR 265
Query: 112 MLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAI 171
           +   + E   PD +++     GG +P+SAV+A  E++ C        T  GNP+++A  +
Sbjct: 266 LHCFEHEGFVPD-ILVLGKGLGGGLPLSAVIAPAEILDCASAFAM-QTLHGNPISAAAGL 323
Query: 172 ASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF--------- 222
           A L+ I  + L   +   G  LR  L ++ ++ P  + ++RGRGL   +E          
Sbjct: 324 AVLETIDRDDLPAMAERKGRLLRDGLSELAKRHP-LIGDIRGRGLACGMELVCDRQSREP 382
Query: 223 ---DKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQE 268
              +   L   AY + L +   G+     +  ++  TPPL+I+  ++ +
Sbjct: 383 ARAETAKLIYRAYQLGLVVYYVGM-----NGNVLEFTPPLTITETDIHK 426

>pdb|2ZUK|A Chain A, The Crystal Structure Of Alpha-Amino-Epsilon-Caprolactam Racemase From Achromobacter Obae Complexed With Epsilon Caprolactam (Different Binding Mode) Length = 439

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 33/289 (11%)
Query: 5   IVSCCGCFHGRTLAAISMS---CDNEAIRGFGPLL---PGHLKVDFGDITA-------LE 51
           +++  G +HG T+ +++ S      +A +  G +L   P   +    D T         E
Sbjct: 133 VIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTE 192
Query: 52  KIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR 111
           K+       I     EPIQ + G+I+PPDG+L+   D+C  + IL++ DE++ GLARSGR
Sbjct: 193 KLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGR 252
Query: 112 MLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAI 171
           +   + E   PD +++     GG +P+SAV+A  E++ C        T  GNP+++A  +
Sbjct: 253 LHCFEHEGFVPD-ILVLGKGLGGGLPLSAVIAPAEILDCASAFAM-QTLHGNPISAAAGL 310
Query: 172 ASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF--------- 222
           A L+ I  + L   +   G  LR  L ++ ++ P  + ++RGRGL   +E          
Sbjct: 311 AVLETIDRDDLPAMAERKGRLLRDGLSELAKRHP-LIGDIRGRGLACGMELVCDRQSREP 369
Query: 223 ---DKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQE 268
              +   L   AY + L +   G+     +  ++  TPPL+I+  ++ +
Sbjct: 370 ARAETAKLIYRAYQLGLVVYYVGM-----NGNVLEFTPPLTITETDIHK 413

>pdb|3FQ7|A Chain A, Gabaculine Complex Of Gsam Length = 427

Iteration: 1
 Score = 97.4 bits (241), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG--------HLKVDFGDITALEKIFKE 56
           I+   GC+HG     +  +    A  G  P  PG         L   + D+ A++ +F E
Sbjct: 137 IIKFEGCYHGHADMFLVKAGSGVATLGL-PSSPGVPKKTTANTLTTPYNDLEAVKALFAE 195
Query: 57  SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD 116
           +  +IAG + EPI G +G I+P  G+L+ +R++  +++ L++ DE+ +G     R+    
Sbjct: 196 NPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGF----RIAYGG 251
Query: 117 WEE---VRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG---EHGSTFGGNPLASAVA 170
            +E   V PD+  LGK +GGG +PV A    +E+M  + P        T  GNPLA    
Sbjct: 252 VQEKFGVTPDLTTLGKIIGGG-LPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAG 310
Query: 171 IASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVS 230
           I +L+++R     E    + + L   L  I Q+  +     +  G+F    F  T  PV 
Sbjct: 311 IKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFG---FFFTEGPVH 367
Query: 231 AYDICLK------------MKERGILAKPTH 249
            Y+   K            M E+GI   P+ 
Sbjct: 368 NYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQ 398

>pdb|3A8U|X Chain X, Crystal Structure Of Omega-Amino Acid:pyruvate Aminotransferase Length = 449

Iteration: 1
 Score = 97.4 bits (241), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 119/231 (51%), Gaps = 16/231 (6%)
Query: 60  QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE 119
            IA    EP+ G AGV++PP+GYLK  R++C+++NIL++ DE+ +G  R+G M  +D   
Sbjct: 219 NIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFG 278
Query: 120 VRPDMVILGKALGGGVIPVSAVLADKEVMLCI--QPG-------EHGSTFGGNPLASAVA 170
           V PD++ + K +  G IP+ AV+A  E+      QP         HG T+  +P+A A  
Sbjct: 279 VTPDLMCIAKQVTNGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAG 338
Query: 171 IASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF---DKTAL 227
           +A+L +++ E L +  A +     + L  I+      V ++R  GL  A++    D  A+
Sbjct: 339 LAALCLLQKENLVQSVAEVAPHFEKALHGIKGA--KNVIDIRNFGLAGAIQIAPRDGDAI 396
Query: 228 PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
            V  ++  + + + G   +   DT+ +  P  +    +L     A+ +VL 
Sbjct: 397 -VRPFEAGMALWKAGFYVRFGGDTL-QFGPTFNSKPQDLDRLFDAVGEVLN 445

>pdb|2GSA|A Chain A, Crystal Structure Of Glutamate-1-Semialdehyde Aminomutase (Aminotransferase, Wild-Type Form) Length = 432

Iteration: 1
 Score = 97.4 bits (241), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG--------HLKVDFGDITALEKIFKE 56
           I+   GC+HG     +  +    A  G  P  PG         L   + D+ A++ +F E
Sbjct: 142 IIKFEGCYHGHADMFLVKAGSGVATLGL-PSSPGVPKKTTANTLTTPYNDLEAVKALFAE 200
Query: 57  SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD 116
           +  +IAG + EPI G +G I+P  G+L+ +R++  +++ L++ DE+ +G     R+    
Sbjct: 201 NPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGF----RIAYGG 256
Query: 117 WEE---VRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG---EHGSTFGGNPLASAVA 170
            +E   V PD+  LGK +GGG +PV A    +E+M  + P        T  GNPLA    
Sbjct: 257 VQEKFGVTPDLTTLGKIIGGG-LPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAG 315
Query: 171 IASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVS 230
           I +L+++R     E    + + L   L  I Q+  +     +  G+F    F  T  PV 
Sbjct: 316 IKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFG---FFFTEGPVH 372
Query: 231 AYDICLK------------MKERGILAKPTH 249
            Y+   K            M E+GI   P+ 
Sbjct: 373 NYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQ 403

>pdb|2HOY|A Chain A, Inter-Subunit Signaling In Gsam Length = 432

Iteration: 1
 Score = 97.4 bits (241), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG--------HLKVDFGDITALEKIFKE 56
           I+   GC+HG     +  +    A  G  P  PG         L   + D+ A++ +F E
Sbjct: 142 IIKFEGCYHGHADMFLVKAGSGVATLGL-PSSPGVPKKTTANTLTTPYNDLEAVKALFAE 200
Query: 57  SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD 116
           +  +IAG + EPI G +G I+P  G+L+ +R++  +++ L++ DE+ +G     R+    
Sbjct: 201 NPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGF----RIAYGG 256
Query: 117 WEE---VRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG---EHGSTFGGNPLASAVA 170
            +E   V PD+  LGK +GGG +PV A    +E+M  + P        T  GNPLA    
Sbjct: 257 VQEKFGVTPDLTTLGKIIGGG-LPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAG 315
Query: 171 IASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVS 230
           I +L+++R     E    + + L   L  I Q+  +     +  G+F    F  T  PV 
Sbjct: 316 IKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFG---FFFTEGPVH 372
Query: 231 AYDICLK------------MKERGILAKPTH 249
            Y+   K            M E+GI   P+ 
Sbjct: 373 NYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQ 403

>pdb|3FQA|A Chain A, Gabaculien Complex Of Gabaculine Resistant Gsam Version Length = 427

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG--------HLKVDFGDITALEKIFKE 56
           I+   GC+HG     +  +    A  G  P  PG         L   + D+ A++ +F E
Sbjct: 137 IIKFEGCYHGHADMFLVKAGSGVATLGL-PSSPGVPKKTTANTLTTPYNDLEAVKALFAE 195
Query: 57  SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD 116
           +  +IAG + EPI G +G I+P  G+L+ +R++  +++ L++ DE+ +G     R+    
Sbjct: 196 NPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF----RIAYGG 251
Query: 117 WEE---VRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG---EHGSTFGGNPLASAVA 170
            +E   V PD+  LGK +GGG +PV A    +E+M  + P        T  GNPLA    
Sbjct: 252 VQEKFGVTPDLTTLGKIIGGG-LPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAG 310
Query: 171 IASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVS 230
           I +L+++R     E    + + L   L  I Q+  +     +  G+F    F  T  PV 
Sbjct: 311 IKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFG---FFFTEGPVH 367
Query: 231 AYDICLK------------MKERGILAKPTH 249
            Y+   K            M E+GI   P+ 
Sbjct: 368 NYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQ 398

>pdb|3FQ8|A Chain A, M248i Mutant Of Gsam Length = 427

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 123/271 (45%), Gaps = 35/271 (12%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG--------HLKVDFGDITALEKIFKE 56
           I+   GC+HG     +  +    A  G  P  PG         L   + D+ A++ +F E
Sbjct: 137 IIKFEGCYHGHADMFLVKAGSGVATLGL-PSSPGVPKKTTANTLTTPYNDLEAVKALFAE 195
Query: 57  SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD 116
           +  +IAG + EPI G +G I+P  G+L+ +R++  +++ L++ DE+ +G     R+    
Sbjct: 196 NPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF----RIAYGG 251
Query: 117 WEE---VRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG---EHGSTFGGNPLASAVA 170
            +E   V PD+  LGK +GGG +PV A    +E+M  + P        T  GNPLA    
Sbjct: 252 VQEKFGVTPDLTTLGKIIGGG-LPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAG 310
Query: 171 IASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVS 230
           I +L+++R     E    + + L   L  I Q+  +     +  G+F    F  T  PV 
Sbjct: 311 IKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFG---FFFTEGPVH 367
Query: 231 AYDICLK------------MKERGILAKPTH 249
            Y+   K            M E+GI   P+ 
Sbjct: 368 NYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQ 398

>pdb|2CFB|A Chain A, Glutamate-1-Semialdehyde 2,1-Aminomutase From Thermosynechococcus Elongatus Length = 411

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 112/240 (46%), Gaps = 17/240 (7%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD--------FGDITALEKIFKE 56
           ++   GC+HG     +  +    A  G  P  PG  K          + D+ A+ ++F++
Sbjct: 121 VIKFEGCYHGHADMFLVKAGSGVATLGL-PDSPGVPKATTAATLTAPYNDLEAVSRLFEQ 179
Query: 57  SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD 116
             + IAG + EP+ G AG I P  G+L+ +R+L  +Y  L++ DE+ +G  R     A +
Sbjct: 180 YPNDIAGVILEPVVGNAGFIPPDAGFLEGLRELTKQYGALLVFDEVMTGF-RIAYGGAQE 238
Query: 117 WEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG---EHGSTFGGNPLASAVAIAS 173
              V PD+  LGK +GGG +PV A     E+M  + P        T  GNPLA    I +
Sbjct: 239 KFGVTPDLTTLGKVIGGG-LPVGAYGGRAEIMKMVAPAGPVYQAGTLSGNPLAMTAGIKT 297
Query: 174 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYD 233
           L+++      E    +  +L Q L    ++F + V      G+F       TA PV+ Y+
Sbjct: 298 LEILSRPGSYEHLDRITGKLVQGLLDAAREFGHEVCGGHISGMFGLF---FTAGPVTNYE 354

>pdb|2E7U|A Chain A, Crystal Structure Of Glutamate-1-Semialdehyde 2,1-Aminomutase From Thermus Thermophilus Hb8 Length = 424

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 40  LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99
           L +++ D   L ++ K  G++IA  +FEP+ G AGV++P + +LKA+ +    Y +L+IA
Sbjct: 179 LVLEYNDPEGLREVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHE-AKAYGVLLIA 237
Query: 100 DEIQSG--LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQ---PG 154
           DE+ +G  LA  G   A++   ++PD+V LGK LGGG +P +A    +E+M  +    P 
Sbjct: 238 DEVMTGFRLAFGG---ATELLGLKPDLVTLGKILGGG-LPAAAYAGRREIMEKVAPLGPV 293
Query: 155 EHGSTFGGNPLASAVAIASLDVIRD 179
               T  GNPLA A  +A+L+++ +
Sbjct: 294 YQAGTLSGNPLAMAAGLATLELLEE 318

>pdb|2EPJ|A Chain A, Crystal Structure Of Glutamate-1-Semialdehyde 2,1-Aminomutase From Aeropyrum Pernix Length = 434

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 98/188 (52%), Gaps = 14/188 (7%)
Query: 4   IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG--------HLKVDFGDITALEKIFK 55
           +I+   GC+HG   A +  +    A  G  P   G         L   + D+ ALE++F 
Sbjct: 140 LILKFDGCYHGSHDAVLVAAGSAAAHYGV-PTSAGVPEAVARLTLVTPYNDVEALERVFA 198
Query: 56  ESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS 115
           E GD+IAG + EP+   AGVI P   +L A++ L  +   L+I DE+ +G  R G   A 
Sbjct: 199 EYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLEGAQ 257
Query: 116 DWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP-GE--HGSTFGGNPLASAVAIA 172
            +  +  D+++LGK +GGG  PV AV   +EVM  + P G+  +  TF  +P+  A  +A
Sbjct: 258 GYFNIEGDIIVLGKIIGGG-FPVGAVAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLA 316
Query: 173 SLDVIRDE 180
           +L  + +E
Sbjct: 317 TLKALEEE 324

>pdb|3BS8|A Chain A, Crystal Structure Of Glutamate 1-Semialdehyde Aminotransferase Complexed With Pyridoxamine-5'-Phosphate From Bacillus Subtilis Length = 438

Iteration: 1
 Score = 90.9 bits (224), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 91/181 (50%), Gaps = 14/181 (7%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG--------HLKVDFGDITALEKIFKE 56
           I+   GC+HG   + +  +    A  G  P  PG         + V + D+ +++  F++
Sbjct: 146 ILKFEGCYHGHGDSLLIKAGSGVATLGL-PDSPGVPEGIAKNTITVPYNDLESVKLAFQQ 204
Query: 57  SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD 116
            G+ IAG + EP+ G  GV+ P +G+L+ +RD+  +Y  L+I DE+ +G  R     A  
Sbjct: 205 FGEDIAGVIVEPVAGNMGVVPPQEGFLQGLRDITEQYGSLLIFDEVMTGF-RVDYNCAQG 263
Query: 117 WEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG---EHGSTFGGNPLASAVAIAS 173
           +  V PD+  LGK +GGG +PV A     E+M  I P        T  GNPLA    + +
Sbjct: 264 YFGVTPDLTCLGKVIGGG-LPVGAYGGKAEIMEQIAPSGPIYQAGTLSGNPLAMTAGLET 322
Query: 174 L 174
           L
Sbjct: 323 L 323

>pdb|3K28|A Chain A, Crystal Structure Of A Glutamate-1-Semialdehyde Aminotransferase From Bacillus Anthracis With Bound Pyridoxal 5'phosphate Length = 429

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 14/191 (7%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG--------HLKVDFGDITALEKIFKE 56
           I+   GC+HG   + +  +    A  G  P  PG         + V + D+ +++  F++
Sbjct: 138 ILKFIGCYHGHGDSLLIKAGSGVATLGL-PDSPGVPEGVAKNTITVAYNDLESVKYAFEQ 196
Query: 57  SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD 116
            GD IA  + EP+ G  GV+ P  G+L+ +R++  +   L+I DE+ +G  R        
Sbjct: 197 FGDDIACVIVEPVAGNXGVVPPQPGFLEGLREVTEQNGALLIFDEVXTGF-RVAYNCGQG 255
Query: 117 WEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG---EHGSTFGGNPLASAVAIAS 173
           +  V PD+  LGK +GGG +PV A     E+   + P        T  GNPLA A    +
Sbjct: 256 YYGVTPDLTCLGKVIGGG-LPVGAYGGKAEIXRQVAPSGPIYQAGTLSGNPLAXAAGYET 314
Query: 174 LDVIRDEKLAE 184
           L  +  E   E
Sbjct: 315 LVQLTPESYVE 325

>pdb|1OHV|A Chain A, 4-aminobutyrate-aminotransferase From Pig Length = 472

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 125/298 (41%), Gaps = 36/298 (12%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGF------GPLLPG-HLKVDFGDITA-------- 49
           I+S  G FHGRT+  ++ +  ++AI          P+ P   LK    +           
Sbjct: 182 ILSFMGAFHGRTMGCLA-TTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEAR 240
Query: 50  -LEKI------FKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 102
            LE++      +++    +AG + EPIQ E G     D + + +RD+  K+    + DE+
Sbjct: 241 CLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEV 300
Query: 103 QSGLARSGRMLASD-WEEVRPD--MVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGST 159
           Q+G   +G+  A + W    P   M    K + GG          KE      P    +T
Sbjct: 301 QTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTGGFF-------HKEEFRPNAPYRIFNT 353
Query: 160 FGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA 219
           + G+P  + +    +++I+ E L   +AH G+ L   L  +Q ++P ++  VRGRG F  
Sbjct: 354 WLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTF-- 411
Query: 220 VEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
             FD     +    I +  + +G++     D  +R  P L    +          D+L
Sbjct: 412 CSFDTPDESIRNKLISI-ARNKGVMLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSDIL 468

>pdb|3L44|A Chain A, Crystal Structure Of Bacillus Anthracis Heml-1, Glutamate Semialdehyde Aminotransferase Length = 434

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 96/212 (45%), Gaps = 26/212 (12%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH--------------LKVDFGDITAL 50
           I    GC+HG +   +  +       G GP   G               + V F ++  L
Sbjct: 140 IXKFAGCYHGHSDLVLVAA-------GSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETL 192
Query: 51  EKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG 110
           ++   + G ++A  L EPI G  G++ P  G+L+ V +L  +   L+I DE+ +   R  
Sbjct: 193 KEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFX 251
Query: 111 RMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV---MLCIQPGEHGSTFGGNPLAS 167
              A D   V PD+  LG  +GGG +P+ A    KE+   +  + P     T  GNP + 
Sbjct: 252 YGGAQDLLGVTPDLTALGXVIGGG-LPIGAYGGKKEIXEQVAPLGPAYQAGTXAGNPASX 310
Query: 168 AVAIASLDVIRDEKLAERSAHLGEELRQHLFK 199
           A  IA L+V++ E L E+   LG  L + + +
Sbjct: 311 ASGIACLEVLQQEGLYEKLDELGATLEKGILE 342

>pdb|4E77|A Chain A, 2.0a Crystal Structure Of A Glutamate-1-Semialdehyde Aminotransferase From Yersinia Pestis Co92 Length = 429

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 100/229 (43%), Gaps = 21/229 (9%)
Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG--------HLKVDFGDITALEKIFKE 56
           I+   GC+HG     +  +       G  P  PG         L   + D+ ++ + F++
Sbjct: 138 IIKFEGCYHGHADCLLVKAGSGALTLG-QPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQ 196
Query: 57  SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD 116
              ++A  + EP+ G    I P   +L  +R LC ++  L+I DE+ +G  R     A D
Sbjct: 197 YPQEVACIIVEPVAGNXNCIPPLPEFLPGLRALCDEFGALLIIDEVXTGF-RVALAGAQD 255
Query: 117 WEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG---EHGSTFGGNPLASAVAIAS 173
           +  V PD+  LGK +GGG  PV A    +EV   + P        T  GNP+A A   A 
Sbjct: 256 YYHVIPDLTCLGKIIGGGX-PVGAFGGRREVXNALAPTGPVYQAGTLSGNPIAXAAGFAC 314
Query: 174 LDVIRD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR-GLF 217
           L  I      E L E +  L   LR H  K ++  P  V  V G  GLF
Sbjct: 315 LTEISQVGVYETLTELTDSLATGLR-HAAK-EENIPLVVNHVGGXFGLF 361

>pdb|4AO9|A Chain A, Biochemical Properties And Crystal Structure Of A Novel Beta-phenylalanine Aminotransferase From Variovorax Paradoxus Length = 454

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 40  LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99
           L + + D        +  G +IA  L EP+QG +G I     +L+A+R+  ++   L++ 
Sbjct: 200 LVLPYNDAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVF 259
Query: 100 DEI-QSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE--- 155
           DE+  S LA  G  LA+    +R D+  LGK +GGG +   A     +VM    P     
Sbjct: 260 DEVMTSRLAPHG--LANKL-GIRSDLTTLGKYIGGG-MSFGAFGGRADVMALFDPRTGPL 315
Query: 156 -HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHL 197
            H  TF  N +  A   A L  +   + A   A  GE LR  L
Sbjct: 316 AHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARL 358

>pdb|2CY8|A Chain A, Crystal Structure Of D-Phenylglycine Aminotransferase (D-Phgat) From Pseudomonas Strutzeri St-201 Length = 453

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 10/161 (6%)
Query: 46  DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 105
           DI  + ++F   G  IA F+ EP+    GV    D +L+   +L  +Y  L I DE+ SG
Sbjct: 187 DIEGMREVFANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISG 246
Query: 106 LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-----HGSTF 160
             R G        +V+PD+  L KA   G +P   +   ++VM  +  G      H  TF
Sbjct: 247 F-RVGNHGMQALLDVQPDLTCLAKA-SAGGLPGGILGGREDVMGVLSRGSDRKVLHQGTF 304
Query: 161 GGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ---HLF 198
            GNP+ +A AIA++D I ++ +  +   LG+  R+   HLF
Sbjct: 305 TGNPITAAAAIAAIDTILEDDVCAKINDLGQFAREAMNHLF 345

>pdb|2YKU|A Chain A, Structural Determinants Of The Beta-Selectivity Of A Bacterial Aminotransferase Length = 465

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 88/221 (39%), Gaps = 23/221 (10%)
Query: 44  FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 103
           + D+     + K  G   A  L EP+ G  G +     +L  +R   S+   L+I DE+ 
Sbjct: 217 YNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVM 276
Query: 104 SGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-----HGS 158
           +     G   A +   +  D+  LGK +GGG +   A    +++M    P       H  
Sbjct: 277 TSRLSGGG--AQEMLGISADLTTLGKYIGGG-MSFGAFGGRRDLMERFDPARDGAFAHAG 333
Query: 159 TFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKI--QQQFPNYVKEVRGRGL 216
           TF  N L  +   A+L  I   + A   +  G+  R +L +I  + Q P    +  G G 
Sbjct: 334 TFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRANLNRIAVENQAP---LQFTGLGS 390
Query: 217 FNAVEFD----KTALPVSAYDICLK------MKERGILAKP 247
              + F     ++A  V A D  LK      M  +GI   P
Sbjct: 391 LGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIYLAP 431

>pdb|4A0G|A Chain A, Structure Of Bifunctional Dapa Aminotransferase-Dtb Synthetase From Arabidopsis Thaliana In Its Apo Form. Length = 831

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 91/215 (42%), Gaps = 17/215 (7%)
Query: 60  QIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118
            +   + EP I G  G+ +    + + + + C    I +I DE+ +G  R G    ++  
Sbjct: 594 HVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELL 653
Query: 119 EVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE------HGSTFGGNPLASAVAIA 172
             +PD+    K L GG++P++  LA   V              HG ++  + +  A A  
Sbjct: 654 GCKPDIACFAKLLTGGMVPLAVTLATDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAK 713
Query: 173 SLDVIRDEKLAERSAHLGEELRQHLF--KIQQQFPNY--VKEVRGRGLFNAVEFDKTA-- 226
           ++   +D +        G+ LR+ L+  ++ QQ  ++  V+ V   G   A+E    A  
Sbjct: 714 AIQWFKDPETNHNITSQGKTLRE-LWDEELVQQISSHSAVQRVVVIGTLFALELKADASN 772
Query: 227 ---LPVSAYDICLKMKERGILAKPTHDTIVRLTPP 258
                + A  + + ++E GI  +P  + I  +  P
Sbjct: 773 SGYASLYAKSLLIMLREDGIFTRPLGNVIYLMCGP 807

>pdb|4A0F|A Chain A, Structure Of Selenomethionine Substituted Bifunctional Dapa Aminotransferase-Dethiobiotin Synthetase From Arabidopsis Thaliana In Its Apo Form. Length = 831

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/209 (22%), Positives = 85/209 (40%), Gaps = 17/209 (8%)
Query: 60  QIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE 118
            +   + EP I G  G       + + + + C    I +I DE+ +G  R G    ++  
Sbjct: 594 HVGALIIEPVIHGAGGXHXVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELL 653
Query: 119 EVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE------HGSTFGGNPLASAVAIA 172
             +PD+    K L GG +P++  LA   V              HG ++  +    A A  
Sbjct: 654 GCKPDIACFAKLLTGGXVPLAVTLATDAVFDSFSGDSKLKALLHGHSYSAHAXGCATAAK 713
Query: 173 SLDVIRDEKLAERSAHLGEELRQHLF--KIQQQFPNY--VKEVRGRGLFNAVEFDKTA-- 226
           ++   +D +        G+ LR+ L+  ++ QQ  ++  V+ V   G   A+E    A  
Sbjct: 714 AIQWFKDPETNHNITSQGKTLRE-LWDEELVQQISSHSAVQRVVVIGTLFALELKADASN 772
Query: 227 ---LPVSAYDICLKMKERGILAKPTHDTI 252
                + A  + + ++E GI  +P  + I
Sbjct: 773 SGYASLYAKSLLIXLREDGIFTRPLGNVI 801

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	306
1z7d_A	433	Ornithine aminotransferase; structural genomics co	1e-149
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	1e-149
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	1e-149
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	1e-107
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	1e-102
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	1e-98
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	4e-98
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	2e-97
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	4e-97
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	5e-97
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	1e-96
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	1e-94
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	2e-94
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	4e-94
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	1e-93
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	8e-87
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	8e-75
3nui_A	478	Pyruvate transaminase; amino transferase, transfer	3e-73
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	7e-73
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	6e-72
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	1e-71
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	2e-71
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	5e-71
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	6e-71
3hmu_A	472	Aminotransferase, class III; structural genomics,	2e-70
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	1e-68
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	3e-66
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	2e-58
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	4e-37
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	7e-36
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	6e-34
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	7e-34
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	1e-33
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	2e-33
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	2e-33
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	9e-31
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	1e-06
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	4e-04

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A Length = 433

 Score =  425 bits (1095), Expect = e-149
 Identities = 124/277 (44%), Positives = 181/277 (65%), Gaps = 5/277 (1%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
            A IV C   F GRTL  IS S   +    FGP  P   KV + D+ ALE+  K+    +
Sbjct: 156 MAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKD--PNV 213

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
             F+ EPIQGEAGVI+P D YL+ V D+C KYN+L +ADE+Q+GL R+G++L      V+
Sbjct: 214 CAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVK 273

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+++LGKAL GG  P+SAVLA+ ++ML I+PGEHGST+GGNPLA+++ + +L+V+ +EK
Sbjct: 274 PDVILLGKALSGGHYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEK 333

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           L E +  LG    ++L +  +     V++VRG+GL  A+EF      V+  DICLK+KE 
Sbjct: 334 LCENAEKLGGPFLENLKRELKDSK-IVRDVRGKGLLCAIEFKNEL--VNVLDICLKLKEN 390

Query: 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           G++ +  HD  +RLTPPL I+  +L E ++ +   ++
Sbjct: 391 GLITRDVHDKTIRLTPPLCITKEQLDECTEIIVKTVK 427

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} Length = 392

 Score =  423 bits (1090), Expect = e-149
 Identities = 130/276 (47%), Positives = 183/276 (66%), Gaps = 11/276 (3%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +A I+ C   FHGRT+ A+SMS + E  RGFGP+LPG + + +GD+ AL+          
Sbjct: 127 RAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYGDLEALKAAI---TPNT 183

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           A F+ EPIQGEAG+ IPP G+LK   ++C K N+L +ADEIQ+GL R+G++ A DW+ V 
Sbjct: 184 AAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVT 243

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PDM ILGKALGGGV P+S   A+++++   +PG HGSTFGGNPLA AV+IA+L+V+ +EK
Sbjct: 244 PDMYILGKALGGGVFPISCAAANRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEK 303

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           L ERS  LGE+L   L +I       + EVRG+GLF  +E ++      A   C ++K  
Sbjct: 304 LTERSLQLGEKLVGQLKEID---NPMITEVRGKGLFIGIELNE-----PARPYCEQLKAA 355

Query: 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           G+L K TH+ ++R+ PPL IS  +L+   + +  VL
Sbjct: 356 GLLCKETHENVIRIAPPLVISEEDLEWAFQKIKAVL 391

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A* Length = 439

 Score =  424 bits (1092), Expect = e-149
 Identities = 137/277 (49%), Positives = 188/277 (67%), Gaps = 6/277 (2%)

Query: 2   QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQI 61
           +A IV   G F GRTL+AIS S D  +  GFGP +PG   + + D+ ALE+        +
Sbjct: 167 KAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERAL--QDPNV 224

Query: 62  AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
           A F+ EPIQGEAGV++P  GYL  VR+LC+++ +L IADEIQ+GLAR+GR LA D+E VR
Sbjct: 225 AAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVR 284

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK 181
           PD+V+LGKAL GG+ PVSAVL D ++ML I+PGEHGST+GGNPL   VAIA+L+V+ +E 
Sbjct: 285 PDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEEN 344

Query: 182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER 241
           LAE +  LG  LR  L K+     + V  VRG+GL NA+   +      A+ +CL++++ 
Sbjct: 345 LAENADKLGIILRNELMKLPS---DVVTAVRGKGLLNAIVIKE-TKDWDAWKVCLRLRDN 400

Query: 242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           G+LAKPTH  I+R  PPL I  +EL+E  + ++  + 
Sbjct: 401 GLLAKPTHGDIIRFAPPLVIKEDELRESIEIINKTIL 437

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A* Length = 395

 Score =  317 bits (815), Expect = e-107
 Identities = 92/274 (33%), Positives = 145/274 (52%), Gaps = 13/274 (4%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLPGHLKVDFGDITALEKIFKESGDQIAG 63
            V+    F GRT+ ++S++      R  F PL+     + + D+ AL++      ++ A 
Sbjct: 133 FVAAMRGFSGRTMGSLSVT-WEPKYREPFLPLVEPVEFIPYNDVEALKRAV---DEETAA 188

Query: 64  FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD 123
            + EP+QGE GV      +L+A R++  +   L+I DEIQ+G+ R+G+  A +   + PD
Sbjct: 189 VILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPD 248

Query: 124 MVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLA 183
           ++ L KALGGGV P+   +  +EV   +  G HG+TFGGNPLA A  +A++  +   +L 
Sbjct: 249 ILTLAKALGGGV-PLGVAVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLW 307

Query: 184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGI 243
           ER+A LG    + L  I       ++EVRG GL   +E  + A    A  I    KE  +
Sbjct: 308 ERAAELGPWFMEKLRAIPSP---KIREVRGMGLMVGLELKEKA----APYIARLEKEHRV 360

Query: 244 LAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           LA     T++R  PPL I   +L+   +A+  VL
Sbjct: 361 LALQAGPTVIRFLPPLVIEKEDLERVVEAVRAVL 394

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A Length = 451

 Score =  305 bits (783), Expect = e-102
 Identities = 89/301 (29%), Positives = 144/301 (47%), Gaps = 29/301 (9%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLPGHLKVDFGD----------------- 46
           +V+    +HGRT   ++++      + GFGP  P   +                      
Sbjct: 151 VVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGEL 210

Query: 47  -ITALEKIFKE--SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 103
                  +  +    D +A  + EPIQGE G I+P DG+L  + D C K +++ IADE+Q
Sbjct: 211 AAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQ 270

Query: 104 SGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGN 163
           +G AR+G M A + E + PD+++  K + GG+ P+SAV    E+M        G T+GGN
Sbjct: 271 TGFARTGAMFACEHEGIDPDLIVTAKGIAGGL-PLSAVTGRAEIMDSPHVSGLGGTYGGN 329

Query: 164 PLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF- 222
           P+A A A+A+++ I  E L  R+  + + ++  L ++Q +    + +VRGRG   A+E  
Sbjct: 330 PIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDD-RIGDVRGRGAMIAMELV 388

Query: 223 ---DKTALPVSAYDICLKMKERGILAKP--THDTIVRLTPPLSISSNELQEGSKALHDVL 277
                         +C      G++     T+  +VR  PPLSI  + L EG   L +VL
Sbjct: 389 KAGTTEPDADLTKALCAGAHAAGVIVLSCGTYGNVVRFLPPLSIGDDLLNEGLDVLEEVL 448

Query: 278 E 278
            
Sbjct: 449 R 449

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A* Length = 426

 Score =  296 bits (759), Expect = 1e-98
 Identities = 76/294 (25%), Positives = 144/294 (48%), Gaps = 22/294 (7%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLPGHLKVDFGD----------ITALEKI 53
            ++  G +HGRT   ++++        G G +     +  +            I ++ +I
Sbjct: 131 TIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRI 190

Query: 54  FKE--SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR 111
           FK   + + IA  + EP+QGE G       +++ +R LC ++ I++IADE+QSG  R+G 
Sbjct: 191 FKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGT 250

Query: 112 MLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAI 171
           + A +   V PD+    K++ GG  P++ V    EVM  + PG  G T+ GNP+A   A+
Sbjct: 251 LFAMEQMGVAPDLTTFAKSIAGG-FPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAAL 309

Query: 172 ASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF-----DKTA 226
             L V   E L +++  LG++L+  L  I ++ P  + +VRG G   A+E          
Sbjct: 310 EVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHP-EIGDVRGLGAMIAIELFEDGDHNKP 368

Query: 227 LPVSAYDICLKMKERGILAKP--THDTIVRLTPPLSISSNELQEGSKALHDVLE 278
                 +I  + +++G++      +  ++R+  PL+I   ++++G + +    +
Sbjct: 369 DAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCFD 422

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A* Length = 420

 Score =  294 bits (754), Expect = 4e-98
 Identities = 90/275 (32%), Positives = 136/275 (49%), Gaps = 8/275 (2%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLPGHLKVDFGDITALEKIFKESGDQIAG 63
           I++    FHGR+L  +S+         GFGP     + V F D+ A++ +     D    
Sbjct: 149 IIAFHNAFHGRSLFTVSVG-GQPKYSDGFGPKPADIIHVPFNDLHAVKAVM---DDHTCA 204

Query: 64  FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD 123
            + EPIQGE GV      +LK +RDLC ++  L++ DE+Q G+ R+G + A     V PD
Sbjct: 205 VVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPD 264

Query: 124 MVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLA 183
           ++   KALGGG  PVSA+L  +E+      G HGST+GGNPLA AVA A+ D+I   ++ 
Sbjct: 265 ILTSAKALGGGF-PVSAMLTTQEIASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVL 323

Query: 184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGI 243
           +      ++  QHL  I +QF     ++RG GL    E         A D      E G+
Sbjct: 324 QGIHTKRQQFVQHLQAIDEQFD-IFSDIRGMGLLIGAELKP-KYKGRARDFLYAGAEAGV 381

Query: 244 LAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           +       ++R  P L +   ++ EG +     + 
Sbjct: 382 MVLNAGADVMRFAPSLVVEEADIHEGMQRFAQAVG 416

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A* Length = 397

 Score =  291 bits (748), Expect = 2e-97
 Identities = 86/275 (31%), Positives = 145/275 (52%), Gaps = 11/275 (4%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLPGHLKVDFGDITALEKIFKESGDQIAG 63
           I+S    FHGRTL +++ +      +  F PL+PG    +F ++  L +      + +  
Sbjct: 131 ILSAHNSFHGRTLGSLTAT-GQPKYQKPFEPLVPGFEYFEFNNVEDLRRKM---SEDVCA 186

Query: 64  FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD 123
              EPIQGE+G++     +L+  R LC +Y+ L++ DE+Q G+ R+G++ A     V PD
Sbjct: 187 VFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPD 246

Query: 124 MVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLA 183
           ++   K LGGGV P+ AV+   E    ++PG+HG+TFGGNPLA    +  +  +  E   
Sbjct: 247 VLTTAKGLGGGV-PIGAVIV-NERANVLEPGDHGTTFGGNPLACRAGVTVIKELTKEGFL 304

Query: 184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGI 243
           E     G  L + L ++++++   V +VRG GL   ++F +    VS  ++  K  E  +
Sbjct: 305 EEVEEKGNYLMKKLQEMKEEYD-VVADVRGMGLMIGIQFRE---EVSNREVATKCFENKL 360

Query: 244 LAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           L  P  +  +R  PPL++   E+    + L  VL+
Sbjct: 361 LVVPAGNNTIRFLPPLTVEYGEIDLAVETLKKVLQ 395

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus} Length = 453

 Score =  292 bits (750), Expect = 4e-97
 Identities = 87/296 (29%), Positives = 140/296 (47%), Gaps = 24/296 (8%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLPGHLKVDFGD-------------ITAL 50
           +V+    +HGRT   ++++  +   +  FGP  P   ++                     
Sbjct: 154 VVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRA 213

Query: 51  EKIFKE--SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 108
               +       +A  + EPIQGE G I+P  G+L  +    S+  ++ IADE+Q+G AR
Sbjct: 214 ISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFAR 273

Query: 109 SGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASA 168
           +G   AS+ E + PD+V + K + GG +P+SAV    E+M  +  G  G T+GGNP+  A
Sbjct: 274 TGAWFASEHEGIVPDIVTMAKGIAGG-MPLSAVTGRAELMDAVYAGGLGGTYGGNPVTCA 332

Query: 169 VAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF----DK 224
            A+A+L V+R+  L  R+  +   +   L  + ++    + EVRGRG   A+E       
Sbjct: 333 AAVAALGVMRELDLPARARAIEASVTSRLSALAEEVD-IIGEVRGRGAMLAIEIVKPGTL 391

Query: 225 TALPVSAYDICLKMKERG--ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
                    I  +   +G  IL   T   ++RL PPL I  + L EG  AL D++ 
Sbjct: 392 EPDAALTKSIAAEALSQGVLILTCGTFGNVIRLLPPLVIGDDLLDEGITALSDIIR 447

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp} Length = 395

 Score =  290 bits (745), Expect = 5e-97
 Identities = 88/276 (31%), Positives = 147/276 (53%), Gaps = 11/276 (3%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLPGHLKVDFGDITALEKIFKESGDQIAG 63
            ++    FHGRTL A+S++  NE  +  F PL+ G     + DI+++EK+     ++   
Sbjct: 127 FIAFKHSFHGRTLGALSLT-ANEKYQKPFKPLISGVKFAKYNDISSVEKLV---NEKTCA 182

Query: 64  FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD 123
            + E +QGE G+      + KA+R LC + +IL+IADEIQ G+ RSG+  A +  ++ PD
Sbjct: 183 IILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPD 242

Query: 124 MVILGKALGGGVIPVSAVLADKEV-MLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKL 182
           ++   KALG G+  V A + +++V    ++ G+HGST+GGNPL  A   A  ++ ++EK+
Sbjct: 243 IMTSAKALGCGL-SVGAFVINQKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKI 301

Query: 183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG 242
            E    L   L Q L ++  +F  + K+ +G G    +  DK    V    +  K +E  
Sbjct: 302 LENVNKLTPYLEQSLDELINEFD-FCKKRKGLGFMQGLSLDK---SVKVAKVIQKCQENA 357

Query: 243 ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           +L     +  +R  PPL +    + E S+ L   L+
Sbjct: 358 LLLISCGENDLRFLPPLILQKEHIDEMSEKLRKALK 393

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A Length = 449

 Score =  291 bits (746), Expect = 1e-96
 Identities = 74/291 (25%), Positives = 121/291 (41%), Gaps = 21/291 (7%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAI--RGFGPLLPGHLKVDFG---------------DI 47
           ++   G FHGR+   +S++   +      F       +   +                 +
Sbjct: 160 VLHLRGAFHGRSGYTLSLTN-TKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEAL 218

Query: 48  TALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA 107
                 F+     IA F+ EPIQGE G       +  A+R+LC +++ L+I DE+Q+G  
Sbjct: 219 RQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCG 278

Query: 108 RSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLAS 167
            +G   A    +V PD+V  GK      +     + +    +   P    ST+GGN    
Sbjct: 279 LTGTAWAYQQLDVAPDIVAFGKKTQVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDM 338

Query: 168 AVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL 227
             A   L+VI  E L ER+   G+ LR  L ++   FP  V + RGRGL  A        
Sbjct: 339 VRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSLPT--- 395

Query: 228 PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
                ++  ++ +R ++  P     VR  PPL++S+ E+     A+   L 
Sbjct: 396 TADRDELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSALP 446

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A* Length = 433

 Score =  285 bits (733), Expect = 1e-94
 Identities = 84/303 (27%), Positives = 136/303 (44%), Gaps = 32/303 (10%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD--------------ITAL 50
           IV     +HG T AA S +      +G GP   G   +                  +  L
Sbjct: 131 IVGFAQSWHGMTGAAASATYSAGR-KGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAEL 189

Query: 51  EKIFK----ESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL 106
           +  F     +S   +A F+ EPI    G+I  PDGY+ A++  C    +L+I DE Q+G+
Sbjct: 190 DYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGV 249

Query: 107 ARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG--EHGSTFGGNP 164
            R+G M A   + V PD++ L K LG G +P++A++    +            +T   +P
Sbjct: 250 GRTGTMFACQRDGVTPDILTLSKTLGAG-LPLAAIVTSAAIEERAHELGYLFYTTHVSDP 308

Query: 165 LASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF-- 222
           L +AV +  LDV++ + L  R+  +G+ LR+ L  + ++F   + +VRGRGL   VE   
Sbjct: 309 LPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFD-CIGDVRGRGLLLGVEIVK 367

Query: 223 ---DKTALPVSAYDICLKMKERGILAK----PTHDTIVRLTPPLSISSNELQEGSKALHD 275
               K         I  +    G+       P    + R+ PPL++S +E+  G   L  
Sbjct: 368 DRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQ 427

Query: 276 VLE 278
            +E
Sbjct: 428 AIE 430

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii} Length = 419

 Score =  284 bits (730), Expect = 2e-94
 Identities = 93/299 (31%), Positives = 151/299 (50%), Gaps = 39/299 (13%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLPGHLKVDFGD----------------- 46
           I++  G FHGRT  +IS++      R   GP +PG + V + +                 
Sbjct: 132 IIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSEL 191

Query: 47  ----ITALEK-IFKE--SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99
               I  +E  IF      +++AG  FEPIQGE G +IPP  +   ++ L  KY IL++ 
Sbjct: 192 VNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVD 251

Query: 100 DEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGST 159
           DE+Q GL R+G++ A +     PD++ L KALGGG++P+ A +  K++    +PG H +T
Sbjct: 252 DEVQMGLGRTGKLFAIENFNTVPDVITLAKALGGGIMPIGATIFRKDLDF--KPGMHSNT 309

Query: 160 FGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA 219
           FGGN LA A+    +D++  + L      +G+   + L  +         +VRG GL   
Sbjct: 310 FGGNALACAIGSKVIDIV--KDLLPHVNEIGKIFAEELQGL-------ADDVRGIGLAWG 360

Query: 220 VEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
           +E+++         I  +  +RG+L  P   + +R+ PPL IS  E ++G   L  V++
Sbjct: 361 LEYNE---KKVRDRIIGESFKRGLLLLPAGRSAIRVIPPLVISEEEAKQGLDILKKVIK 416

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus} Length = 375

 Score =  282 bits (724), Expect = 4e-94
 Identities = 88/274 (32%), Positives = 140/274 (51%), Gaps = 19/274 (6%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIR-GFGPLLPGHLKVDFGDITALEKIFKESGDQIAG 63
            +S    FHGRT  ++S +        GF PL+PG       DI ++ K+     ++ AG
Sbjct: 120 FISFENSFHGRTYGSLSAT-GQPKFHKGFEPLVPGFSYAKLNDIDSVYKLL---DEETAG 175

Query: 64  FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD 123
            + E IQGE GV    + +L  ++++C + ++L+I DE+Q+G+ R+G   A     ++PD
Sbjct: 176 IIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPD 235

Query: 124 MVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLA 183
           ++ L K LGGGV P+ A+LA +EV     PG HGSTFGGNPLA       +D +  EKL 
Sbjct: 236 VIALAKGLGGGV-PIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEV--EKLL 292

Query: 184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGI 243
                +G   ++ L ++ +       +V+GRGL   +E ++            K  E+G+
Sbjct: 293 PHVREVGNYFKEKLKELGK------GKVKGRGLMLGLELERECKDYVL-----KALEKGL 341

Query: 244 LAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           L   T   ++R  PPL I    +      L ++L
Sbjct: 342 LINCTAGKVLRFLPPLIIQKEHIDRAISVLREIL 375

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A* Length = 439

 Score =  283 bits (727), Expect = 1e-93
 Identities = 78/296 (26%), Positives = 144/296 (48%), Gaps = 27/296 (9%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD--------------ITAL 50
           +++  G +HG T+ +++ S  +  ++       G + + + D              +T L
Sbjct: 133 VIAFAGAYHGCTVGSMAFSGHS--VQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLL 190

Query: 51  EKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS 109
            +         I     EPIQ + G+I+PPDG+L+   D+C  + IL++ DE++ GLARS
Sbjct: 191 TEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARS 250

Query: 110 GRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAV 169
           GR+   + E   PD+++LGK LGGG +P+SAV+A  E++ C        T  GNP+++A 
Sbjct: 251 GRLHCFEHEGFVPDILVLGKGLGGG-LPLSAVIAPAEILDC-ASAFAMQTLHGNPISAAA 308

Query: 170 AIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF-----DK 224
            +A L+ I  + L   +   G  LR  L ++ ++ P  + ++RGRGL   +E       +
Sbjct: 309 GLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHP-LIGDIRGRGLACGMELVCDRQSR 367

Query: 225 TALPVSAYDICLKMKERGILAKP--THDTIVRLTPPLSISSNELQEGSKALHDVLE 278
                    +  +  + G++      +  ++  TPPL+I+  ++ +    L     
Sbjct: 368 EPARAETAKLIYRAYQLGLVVYYVGMNGNVLEFTPPLTITETDIHKALDLLDRAFS 423

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A* Length = 472

 Score =  266 bits (683), Expect = 8e-87
 Identities = 60/297 (20%), Positives = 117/297 (39%), Gaps = 34/297 (11%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAI--RGFGPLLPGHLKV-----------------DFG 45
           I+S  G FHGRT+  ++ +  ++AI                                +  
Sbjct: 182 ILSFMGAFHGRTMGCLATTH-SKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEAR 240

Query: 46  DITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI 102
            +  +E +  +       +AG + EPIQ E G     D + + +RD+  K+    + DE+
Sbjct: 241 CLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEV 300

Query: 103 QSGLARSGRMLASDWEEVR--PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTF 160
           Q+G   +G+  A +   +    D++   K +  G           E      P    +T+
Sbjct: 301 QTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTGG-FFHK-----EEFRPNAPYRIFNTW 354

Query: 161 GGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV 220
            G+P  + +    +++I+ E L   +AH G+ L   L  +Q ++P ++  VRGRG F + 
Sbjct: 355 LGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSF 414

Query: 221 EFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           +    ++      +    + +G++     D  +R  P L    +          D+L
Sbjct: 415 DTPDESI---RNKLISIARNKGVMLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSDIL 468

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis} Length = 452

 Score =  235 bits (602), Expect = 8e-75
 Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 39/303 (12%)

Query: 13  HGRTLAAISMSCDNEAIRGFGPLLPGHLKVD---------------FGD--ITALEKIFK 55
           HG T+A ++ +   +    + P   G L V                +    +  ++++  
Sbjct: 150 HGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMT 209

Query: 56  ESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA 114
               + IA F+ EPI    G+++ P  Y+KAV + C K+  L+I+DE+  G  R+G+   
Sbjct: 210 WELSETIAAFIMEPIITGGGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFG 269

Query: 115 SDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE------HGSTFGGNPLASA 168
               +V+PD++ + K +    +P+SA    +E+    +         H +TFGGNP A A
Sbjct: 270 FMNYDVKPDIITMAKGITSAYLPLSATAVKREIYEAFKGKGEYEFFRHINTFGGNPAACA 329

Query: 169 VAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF-----D 223
           +A+ +L++I +E L ERSA +G  L + L +   + P  V ++RG+GL   +E       
Sbjct: 330 LALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHP-LVGDIRGKGLLVGIELVNDKET 388

Query: 224 KTALPVS--------AYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHD 275
           K  +             +  L +   G+     ++ +  L PPL ISS E+      L  
Sbjct: 389 KEPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILT-LAPPLVISSEEIAFVIGTLKT 447

Query: 276 VLE 278
            +E
Sbjct: 448 AME 450

>3nui_A Pyruvate transaminase; amino transferase, transferase; 2.00A {Vibrio fluvialis} Length = 478

 Score =  232 bits (593), Expect = 3e-73
 Identities = 85/308 (27%), Positives = 133/308 (43%), Gaps = 38/308 (12%)

Query: 13  HGRTLAAISMSCDNEAIRGFGPLLPGHLKV----------------DFGDITALE---KI 53
           HG T  + SM+        FG  LPG + +                 F    A E    I
Sbjct: 165 HGVTAVSASMT-GKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETI 223

Query: 54  FKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 113
            +E  D IAGF  EP+ G  GVI P  GY +A+  +  KY+I +I+DE+  G  R+G   
Sbjct: 224 QREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTW 283

Query: 114 ASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-------HGSTFGGNPLA 166
                +  PD +I  K L  G  P+ AV+   E+   ++          HG T  G+P+ 
Sbjct: 284 GCVTYDFTPDAIISSKNLTAGFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGHPVG 343

Query: 167 SAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF---- 222
            A+A+ ++DV+ +E LAE    L     + L  I  + PN + E RG G   A+E     
Sbjct: 344 CAIALKAIDVVMNEGLAENVRRLAPRFEERLKHI-AERPN-IGEYRGIGFMWALEAVKDK 401

Query: 223 -DKTALPVS---AYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
             KT    +   +  I     + G++ +P   ++V L PP  ++  ++ E    L   L+
Sbjct: 402 ASKTPFDGNLSVSERIANTCTDLGLICRPLGQSVV-LCPPFILTEAQMDEMFDKLEKALD 460

Query: 279 LDLPKMRK 286
               ++  
Sbjct: 461 KVFAEVAA 468

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} PDB: 3drd_A 3du4_A* Length = 448

 Score =  230 bits (588), Expect = 7e-73
 Identities = 83/300 (27%), Positives = 143/300 (47%), Gaps = 37/300 (12%)

Query: 12  FHGRTLAAISMSCDNEAIRG-FGPLLPGHLKVDF----------------GDITALEKIF 54
           +HG T+ A+S+    E     +GPL+    K                     +  L ++ 
Sbjct: 146 YHGDTIGAVSV-GSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLL 204

Query: 55  KESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 113
           +E  ++IA    E  +QG +G+I+ P+GYL  VR+LC+ Y++LMI DE+ +G  R+G+M 
Sbjct: 205 EEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMF 264

Query: 114 ASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-------HGSTFGGNPLA 166
           A + E V+PD++  GK + GG +P++   A +++               HG ++ GN L 
Sbjct: 265 ACEHENVQPDLMAAGKGITGGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLG 324

Query: 167 SAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA 226
            AVA+ +L +   E + E+ A   ++L   L  +    P+ V ++R  G     E  ++ 
Sbjct: 325 CAVALENLALFESENIVEQVAEKSKKLHFLLQDL-HALPH-VGDIRQLGFMCGAELVRSK 382

Query: 227 LPVSAYD--------ICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
                Y         + LKM+E G+L +P  D I    PPL+ ++ EL E    +   + 
Sbjct: 383 ETKEPYPADRRIGYKVSLKMRELGMLTRPLGDVIA-FLPPLASTAEELSEMVAIMKQAIH 441

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida} Length = 449

 Score =  227 bits (582), Expect = 6e-72
 Identities = 75/300 (25%), Positives = 133/300 (44%), Gaps = 37/300 (12%)

Query: 13  HGRTLAAISMSCDNEAIRGFGPLLPGHLKV----------------DFGDITA---LEKI 53
           HG  +A  S+   N   + FG  +     +                + G   A   L+ I
Sbjct: 153 HGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLI 212

Query: 54  FKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 113
                  IA    EP+ G AGV++PP+GYLK  R++C+++NIL++ DE+ +G  R+G M 
Sbjct: 213 ELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMF 272

Query: 114 ASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE---------HGSTFGGNP 164
            +D   V PD++ + K +  G IP+ AV+A  E+                 HG T+  +P
Sbjct: 273 GADSFGVTPDLMCIAKQVTNGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHP 332

Query: 165 LASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF-- 222
           +A A  +A+L +++ E L +  A +     + L  I +   N V ++R  GL  A++   
Sbjct: 333 VACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGI-KGAKN-VIDIRNFGLAGAIQIAP 390

Query: 223 DKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQE----GSKALHDVLE 278
                 V  ++  + + + G   +   DT+    P  +    +L        + L+ +L+
Sbjct: 391 RDGDAIVRPFEAGMALWKAGFYVRFGGDTLQ-FGPTFNSKPQDLDRLFDAVGEVLNKLLD 449

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A* Length = 457

 Score =  227 bits (580), Expect = 1e-71
 Identities = 78/282 (27%), Positives = 128/282 (45%), Gaps = 22/282 (7%)

Query: 12  FHGRTLAAISMSCDNEAIRG--FGPLLPGHLKVDF-------GDITALEKIFKESGDQIA 62
           +HG T  A+S+ CD        +  +L   +               A E    +   ++A
Sbjct: 177 YHGDTFLAMSI-CDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELA 235

Query: 63  GFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR 121
             + EP+ QG  G+      YL  +RD+C +Y +L+I DEI +G  R+G + A+D   V 
Sbjct: 236 AVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVS 295

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-----HGSTFGGNPLASAVAIASLDV 176
           PD++ +GKAL GG + ++A L   +V   I  G      HG TF  NPLA AV++AS+++
Sbjct: 296 PDIMCVGKALTGGYLSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSVASVEL 355

Query: 177 IRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICL 236
           +  +    R   L   L   L   +      V +VR  G    +E D+   PV       
Sbjct: 356 LLGQDWRTRITELAAGLTAGLDTARAL--PAVTDVRVCGAIGVIECDR---PVDLAVATP 410

Query: 237 KMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
              +RG+  +P  + +    PP   +  E+ + + A+ +V  
Sbjct: 411 AALDRGVWLRPFRNLVY-AMPPYICTPAEITQITSAMVEVAR 451

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A* Length = 429

 Score =  226 bits (578), Expect = 2e-71
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 26/286 (9%)

Query: 12  FHGRTLAAISMSCDNEAI--RGFGPLLPGHLKVDF-----------GDITALEKIFKESG 58
           +HG T  A+S+ CD +      +   LP +L                D+    ++     
Sbjct: 144 YHGDTFGAMSV-CDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHR 202

Query: 59  DQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW 117
            +IA  + EPI QG  G+ +    +LK +R +C +  IL+IADEI +G  R+G++ A + 
Sbjct: 203 HEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEH 262

Query: 118 EEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-----HGSTFGGNPLASAVAIA 172
            E+ PD++ LGKAL GG + +SA L  +EV   I  GE     HG TF GNPLA A A A
Sbjct: 263 AEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANA 322

Query: 173 SLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAY 232
           SL ++      ++ A +  +LR+ L   +      V +VR  G    VE      PV+  
Sbjct: 323 SLAILESGDWQQQVADIEVQLREQLAPARDA--EMVADVRVLGAIGVVETTH---PVNMA 377

Query: 233 DICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
            +     E+G+  +P    I  L PP  I   +LQ  + A++  ++
Sbjct: 378 ALQKFFVEQGVWIRPFGKLIY-LMPPYIILPQQLQRLTAAVNRAVQ 422

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, pyridoxal phosphate, PSI-2, protein structure initiative; 1.70A {Deinococcus radiodurans} Length = 430

 Score =  225 bits (575), Expect = 5e-71
 Identities = 85/296 (28%), Positives = 131/296 (44%), Gaps = 31/296 (10%)

Query: 13  HGRTLAAISMSCDNEAIRGFGPLLPGHLKV--------DFGDITA--LEKIFKESG-DQI 61
           HG +L +++ S        + PL+                G   A  L  + +  G + +
Sbjct: 132 HGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETV 191

Query: 62  AGFLFEPIQG-EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD-WEE 119
           A F+ EP+ G     + P  GY + VRD+C +  I+ IADE+ SG+ R G  LA   W  
Sbjct: 192 AAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSG 251

Query: 120 VRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE----HGSTFGGNPLASAVAIASLD 175
           V PD+ +LGK L  G  P++ +LA  +V   +  G     HG T+ G+P++ A  ++ LD
Sbjct: 252 VTPDIAVLGKGLAAGYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLD 311

Query: 176 VIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF----DKTALPVS- 230
           ++  E L   +   G +L   L  +Q +FP  + +VRG GL   V         A     
Sbjct: 312 IVEREDLTGAAKERGAQLLAGLQALQARFP-QMMQVRGTGLLLGVVLGDLATGQAFETPG 370

Query: 231 -AYDICLKMKERGILAKPTHDTIVR-------LTPPLSISSNELQEGSKALHDVLE 278
            A  I     +RG++  P              L PPLSI++ E+      L   LE
Sbjct: 371 IASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAGALE 426

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A* Length = 460

 Score =  225 bits (576), Expect = 6e-71
 Identities = 78/302 (25%), Positives = 125/302 (41%), Gaps = 38/302 (12%)

Query: 13  HGRTLAAISMSCDNEAIRGFGPLLPGHLKV----------------DFGDITA--LE-KI 53
           HG  +   S++  +     F       L                   F    A  LE  I
Sbjct: 155 HGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMI 214

Query: 54  FKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML 113
             E  + IA F+ EPI G  G++ PP GY + ++ +  KY++L++ADE+ +G  R G M 
Sbjct: 215 LAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMF 274

Query: 114 ASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-------HGSTFGGNPLA 166
            SD   ++PD++ + K L     P+S V+    V   +  G        HG T+  +P+ 
Sbjct: 275 GSDHYGIKPDLITIAKGLTSAYAPLSGVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPIC 334

Query: 167 SAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF---- 222
            A  +A+L++I +  L   +   G   R  L K      N V EVRG G+  AVEF    
Sbjct: 335 VAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKN-VGEVRGDGMLAAVEFVADK 393

Query: 223 -DKTALPVS---AYDICLKMKERGIL--AKPTHDTIVRLTPPLSISSNELQEGSKALHDV 276
            D+     S      +   +   G++  A P  D +    PPL ++  +         D 
Sbjct: 394 DDRVFFDASQKIGPQVATALAASGVIGRAMPQGDILG-FAPPLCLTREQADIVVSKTADA 452

Query: 277 LE 278
           ++
Sbjct: 453 VK 454

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi} Length = 472

 Score =  224 bits (573), Expect = 2e-70
 Identities = 72/316 (22%), Positives = 137/316 (43%), Gaps = 32/316 (10%)

Query: 13  HGRTLAAISMSCDNEAIRGFGPLLPGHLKVD---------------FGDITA--LE-KIF 54
           HG T+A+ ++      +     L+P    ++               FG   A  LE  I 
Sbjct: 159 HGSTVASSALGG-MAGMHAQSGLIPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAIL 217

Query: 55  KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA 114
           +   +++A F+ EP+QG  GVI+ PD Y   ++ +C KY+IL+IADE+  G  R+G    
Sbjct: 218 ELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFG 277

Query: 115 SDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE--HGSTFGGNPLASAVAIA 172
           +    +RP ++ + K L  G  P+   +   EV   I   E  HG T+ G+P+A+AVA+ 
Sbjct: 278 TQTMGIRPHIMTIAKGLSSGYAPIGGSIVCDEVAHVIGKDEFNHGYTYSGHPVAAAVALE 337

Query: 173 SLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF-----DKTAL 227
           +L ++ +E + +   ++     +  ++     P  V E +  G+  ++        +   
Sbjct: 338 NLRILEEENILDHVRNVAAPYLKEKWEALTDHPL-VGEAKIVGMMASIALTPNKASRAKF 396

Query: 228 PVS----AYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK 283
                   Y    +     ++ +   D ++ ++PPL I+  E+ E    +   L+    +
Sbjct: 397 ASEPGTIGYICRERCFANNLIMRHVGDRMI-ISPPLVITPAEIDEMFVRIRKSLDEAQAE 455

Query: 284 MRKPKPADAPATPCHR 299
           + K     +     H 
Sbjct: 456 IEKQGLMKSEGHHHHH 471

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A* Length = 459

 Score =  219 bits (561), Expect = 1e-68
 Identities = 80/296 (27%), Positives = 129/296 (43%), Gaps = 32/296 (10%)

Query: 13  HGRTLAAISMSCDNEAIRGFGPLLPGHLKV---------------DFGDITA--LE-KIF 54
           HG T+   S+             +PG   +               +FG + A  LE KI 
Sbjct: 154 HGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLEEKIL 213

Query: 55  KESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA 114
           +   D++A F+ EPIQG  GVI+PP  Y   +  +C KY++L++ADE+  G  R+G    
Sbjct: 214 EIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFG 273

Query: 115 SDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE---HGSTFGGNPLASAVAI 171
                 +PD+    K L  G +P+ AV   K V   +  G    HG T+ G+P+ +AVA 
Sbjct: 274 HQHFGFQPDLFTAAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNHGFTYSGHPVCAAVAH 333

Query: 172 ASLDVIRDEKLAERSA-HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF-----DKT 225
           A++  +RDE + +R    +G  +++   +   +F + V +VRG G+  A         + 
Sbjct: 334 ANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEH-VDDVRGVGMVQAFTLVKNKAKRE 392

Query: 226 ALPVS---AYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
             P                 ++ +   D IV   PPL ++  E+ E        LE
Sbjct: 393 LFPDFGEIGTLCRDIFFRNNLIMRACGDHIV-SAPPLVMTRAEVDEMLAVAERCLE 447

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2} Length = 476

 Score =  214 bits (546), Expect = 3e-66
 Identities = 74/321 (23%), Positives = 125/321 (38%), Gaps = 38/321 (11%)

Query: 13  HGRTLAAISMSCDNEAIRGFGPLLPGHLKV--------------DFGDITA---LEKIFK 55
           HG T    + +        F         +               F D       ++I  
Sbjct: 157 HGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIES 216

Query: 56  ESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS 115
              D IA FL EPI    GVIIPP GY    + +C K++IL I+DE+ +G  R G   AS
Sbjct: 217 LGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFAS 276

Query: 116 DWE-EVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-------HGSTFGGNPLAS 167
           +    V PD++   K +  G +P+  +   + V+  I           +G T+   P+A 
Sbjct: 277 EKVFGVVPDIITFAKGVTSGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVAC 336

Query: 168 AVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF----- 222
           A A+A+++++  E + +++  + +     L  + +  P  V E R  GL   V+      
Sbjct: 337 AAALANIELMEREGIVDQAREMADYFAAALASL-RDLPG-VAETRSVGLVGCVQCLLDPT 394

Query: 223 DKTALPVS---AYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE- 278
                         I  +  E G++ +P  D  V ++PPL IS  ++ E    +   +  
Sbjct: 395 RADGTAEDKAFTLKIDERCFELGLIVRPLGDLCV-ISPPLIISRAQIDEMVAIMRQAITE 453

Query: 279 -LDLPKMRKPKPADAPATPCH 298
                 +   +PA       H
Sbjct: 454 VSAAHGLTAKEPAAVEGHHHH 474

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A* Length = 831

 Score =  199 bits (508), Expect = 2e-58
 Identities = 46/244 (18%), Positives = 88/244 (36%), Gaps = 18/244 (7%)

Query: 51  EKIFKESGDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS 109
           E         +   + EP+  G  G+ +    + + + + C    I +I DE+ +G  R 
Sbjct: 585 EHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRL 644

Query: 110 GRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE------HGSTFGGN 163
           G    ++    +PD+    K L GG++P++  LA   V              HG ++  +
Sbjct: 645 GVETTTELLGCKPDIACFAKLLTGGMVPLAVTLATDAVFDSFSGDSKLKALLHGHSYSAH 704

Query: 164 PLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQ----QQFPNYVKEVRGRGLFNA 219
            +  A A  ++   +D +        G+ LR+   +            V+ V   G   A
Sbjct: 705 AMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSA-VQRVVVIGTLFA 763

Query: 220 VEFD-----KTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALH 274
           +E            + A  + + ++E GI  +P  + I  L      S    +     L+
Sbjct: 764 LELKADASNSGYASLYAKSLLIMLREDGIFTRPLGNVIY-LMCGPCTSPEICRRLLTKLY 822

Query: 275 DVLE 278
             L 
Sbjct: 823 KRLG 826

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A* Length = 465

 Score =  136 bits (345), Expect = 4e-37
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 21/204 (10%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPL-LPGH-LKVDFGDITALEKIFKESGDQIA 62
           +++  G +HG  L   S         G  P   P H +   + D+     + K  G   A
Sbjct: 185 VLAFDGGYHGGLLNFAS---------GHAPTNAPYHVVLGVYNDVEGTADLLKRHGHDCA 235

Query: 63  GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG-LARSGRMLASDWEEVR 121
             L EP+ G  G +     +L  +R   S+   L+I DE+ +  L+  G   A +   + 
Sbjct: 236 AILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMTSRLSGGG---AQEMLGIS 292

Query: 122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS-----TFGGNPLASAVAIASLDV 176
            D+  LGK +GGG +   A    +++M    P   G+     TF  N L  +   A+L  
Sbjct: 293 ADLTTLGKYIGGG-MSFGAFGGRRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQ 351

Query: 177 IRDEKLAERSAHLGEELRQHLFKI 200
           I   + A   +  G+  R +L +I
Sbjct: 352 IYTRQAASDLSASGDRFRANLNRI 375

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri} Length = 453

 Score =  133 bits (336), Expect = 7e-36
 Identities = 51/232 (21%), Positives = 86/232 (37%), Gaps = 30/232 (12%)

Query: 40  LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99
           L +   DI  + ++F   G  IA F+ EP+    GV    D +L+   +L  +Y  L I 
Sbjct: 181 LLIRPDDIEGMREVFANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFIL 240

Query: 100 DEIQSG--LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHG 157
           DE+ SG  +   G        +V+PD+  L KA  GG +P   +   ++VM  +  G   
Sbjct: 241 DEVISGFRVGNHG---MQALLDVQPDLTCLAKASAGG-LPGGILGGREDVMGVLSRGSDR 296

Query: 158 S-----TFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQQQFPNYV 208
                 TF GNP+ +A AIA++D I +     K+ +      E +     +  +      
Sbjct: 297 KVLHQGTFTGNPITAAAAIAAIDTILEDDVCAKINDLGQFAREAMNHLFAR--KGLNWLA 354

Query: 209 KEVRG-RGLFNAVEFDKTALPVSAYDICLK------------MKERGILAKP 247
                   L   +  + T           +            +   G+    
Sbjct: 355 YGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIGG 406

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} Length = 434

 Score =  127 bits (322), Expect = 6e-34
 Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 17/171 (9%)

Query: 40  LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99
           + V F ++  L++   + G ++A  L EPI G  G++ P  G+L+ V +L  +   L+I 
Sbjct: 182 ITVPFNNVETLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIY 241

Query: 100 DEIQSG--LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHG 157
           DE+ +       G   A D   V PD+  LGK +GGG +P+ A    KE+M  + P   G
Sbjct: 242 DEVITAFRFMYGG---AQDLLGVTPDLTALGKVIGGG-LPIGAYGGKKEIMEQVAPL--G 295

Query: 158 S-----TFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFK 199
                 T  GNP + A  IA L+V++     EKL E  A L + + +   K
Sbjct: 296 PAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAK 346

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A* Length = 434

 Score =  127 bits (321), Expect = 7e-34
 Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 17/171 (9%)

Query: 40  LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99
           L   + D+ ALE++F E GD+IAG + EP+   AGVI P   +L A++ L  +   L+I 
Sbjct: 183 LVTPYNDVEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLIL 242

Query: 100 DEIQSG--LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHG 157
           DE+ +G  L   G   A  +  +  D+++LGK +GGG  PV AV   +EVM  + P   G
Sbjct: 243 DEVVTGFRLGLEG---AQGYFNIEGDIIVLGKIIGGG-FPVGAVAGSREVMSLLTPQ--G 296

Query: 158 S-----TFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFK 199
                 TF  +P+  A  +A+L  + +        E +  L E   + L +
Sbjct: 297 KVFNAGTFNAHPITMAAGLATLKALEEEPVYSVSREAAKALEEAASEVLDR 347

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A* Length = 427

 Score =  126 bits (319), Expect = 1e-33
 Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 17/171 (9%)

Query: 40  LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99
           L   + D+ A++ +F E+  +IAG + EPI G +G I+P  G+L+ +R++  +++ L++ 
Sbjct: 179 LTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVF 238

Query: 100 DEIQSG--LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHG 157
           DE+ +G  +A  G     +   V PD+  LGK +GGG +PV A    +E+M  + P   G
Sbjct: 239 DEVITGFRIAYGG---VQEKFGVTPDLTTLGKIIGGG-LPVGAYGGKREIMQLVAPA--G 292

Query: 158 S-----TFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFK 199
                 T  GNPLA    I +L+++R     E L + +  L + L     +
Sbjct: 293 PMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQE 343

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} PDB: 3bs8_A* Length = 429

 Score =  126 bits (318), Expect = 2e-33
 Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 16/170 (9%)

Query: 40  LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99
           + V + D+ +++  F++ GD IA  + EP+ G  GV+ P  G+L+ +R++  +   L+I 
Sbjct: 180 ITVAYNDLESVKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIF 239

Query: 100 DEIQSG--LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHG 157
           DE+ +G  +A +       +  V PD+  LGK +GGG +PV A     E+M  + P   G
Sbjct: 240 DEVMTGFRVAYNC---GQGYYGVTPDLTCLGKVIGGG-LPVGAYGGKAEIMRQVAPS--G 293

Query: 158 S-----TFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFK 199
                 T  GNPLA A    +L  +      +   ++  L   LR+   K
Sbjct: 294 PIYQAGTLSGNPLAMAAGYETLVQLTPESYVEFERKAEMLEAGLRKAAEK 343

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis} Length = 429

 Score =  125 bits (317), Expect = 2e-33
 Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 17/171 (9%)

Query: 40  LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99
           L   + D+ ++ + F++   ++A  + EP+ G    I P   +L  +R LC ++  L+I 
Sbjct: 180 LTCTYNDLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLII 239

Query: 100 DEIQSG--LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHG 157
           DE+ +G  +A +G   A D+  V PD+  LGK +GGG +PV A    +EVM  + P   G
Sbjct: 240 DEVMTGFRVALAG---AQDYYHVIPDLTCLGKIIGGG-MPVGAFGGRREVMNALAPT--G 293

Query: 158 S-----TFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFK 199
                 T  GNP+A A   A L  I      E L E +  L   LR    +
Sbjct: 294 PVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKE 344

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus} Length = 424

 Score =  118 bits (299), Expect = 9e-31
 Identities = 59/172 (34%), Positives = 98/172 (56%), Gaps = 19/172 (11%)

Query: 40  LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIA 99
           L +++ D   L ++ K  G++IA  +FEP+ G AGV++P + +LKA+ +    Y +L+IA
Sbjct: 179 LVLEYNDPEGLREVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHE-AKAYGVLLIA 237

Query: 100 DEIQSG--LARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHG 157
           DE+ +G  LA  G   A++   ++PD+V LGK LGGG +P +A    +E+M  + P   G
Sbjct: 238 DEVMTGFRLAFGG---ATELLGLKPDLVTLGKILGGG-LPAAAYAGRREIMEKVAPL--G 291

Query: 158 S-----TFGGNPLASAVAIASLDVIRD-----EKLAERSAHLGEELRQHLFK 199
                 T  GNPLA A  +A+L+++ +       L +  A L   L++ L +
Sbjct: 292 PVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKE 343

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.4 bits (122), Expect = 2e-07
 Identities = 58/327 (17%), Positives = 95/327 (29%), Gaps = 101/327 (30%)

Query: 52  KIFKESGDQIA-GFLFEPIQGEA-GVIIPPDGYLKAVRDLC------SKYNI--LMIADE 101
           + F E   +I   FL  PI+ E     +    Y++    L       +KYN+  L    +
Sbjct: 80  QKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLK 139

Query: 102 IQSGLARSGRMLASDWEEVRPD--MVILGKALGGG--VIPVSAVLADKEVMLCIQPGEHG 157
           ++  L            E+RP   ++I G   G G   +    V    +V   +      
Sbjct: 140 LRQAL-----------LELRPAKNVLIDGVL-GSGKTWV-ALDVCLSYKVQCKMDFKIFW 186

Query: 158 STFG--GNPLASAVAIASLDVIRDEKLAERSAH----------LGEELRQHLFKIQQQFP 205
                  +P      +  L    D     RS H          +  ELR  L K  + + 
Sbjct: 187 LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR-RLLK-SKPYE 244

Query: 206 N---YVKEVRGRGLFNAVEFD---KTAL------------PVSAYDICLKMKERG----- 242
           N    +  V+    +NA  F+   K  L              +   I L           
Sbjct: 245 NCLLVLLNVQNAKAWNA--FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE 302

Query: 243 ---ILAKPTHDTIVRLTP------PLSIS--SNELQEG-----------SKALHDVLE-- 278
              +L K        L        P  +S  +  +++G              L  ++E  
Sbjct: 303 VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS 362

Query: 279 ---LDLPKMRK--------PKPADAPA 294
              L+  + RK        P  A  P 
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAHIPT 389

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2 Length = 467

 Score = 48.2 bits (114), Expect = 1e-06
 Identities = 48/258 (18%), Positives = 88/258 (34%), Gaps = 38/258 (14%)

Query: 46  DITALEK-IFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 104
           DI  L++ I +   D I   +       AG        LK V ++  ++ I ++ D  + 
Sbjct: 168 DIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARF 227

Query: 105 GLA------RSGRMLASDWEEVRPDMVILG--------KALGGGVIPVSAVLADKEVMLC 150
                    R  +   +  +EV  DM            K     +  + A+  ++E+   
Sbjct: 228 CENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIGGLVAIRDNEEIFTL 287

Query: 151 I----QPGEHGSTFGGNP--LASAVAIASLDVIRDEKLAER---SAHLGEELRQHLFKIQ 201
                 P E   T+GG      +A+     +   +E L  R     +LG+ LR+    IQ
Sbjct: 288 ARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLREAGIPIQ 347

Query: 202 QQFPNYVKEVRGRGLFNAV---EFDKTALPVSAYDIC-LKMKERGILA----------KP 247
                +   V  + L   +   +F   A+  + Y    ++  E G             K 
Sbjct: 348 YPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKH 407

Query: 248 THDTIVRLTPPLSISSNE 265
                +RLT    + +N+
Sbjct: 408 ADMEFMRLTIARRVYTND 425

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A* Length = 456

 Score = 40.5 bits (94), Expect = 4e-04
 Identities = 50/258 (19%), Positives = 87/258 (33%), Gaps = 39/258 (15%)

Query: 46  DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS 104
           D+  L+K+  E G + IA          AG        ++AVR+L   + I +  D  + 
Sbjct: 159 DLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRC 218

Query: 105 -------GLARSGRMLASDWEEVRP-----DMV------ILGKALGGGVIPVSAVLADKE 146
                       G    S  E V       D             +GG +      +    
Sbjct: 219 VENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVNIGGFLCMNDDEMFSSA 278

Query: 147 VMLCIQPGEHGSTFGGN--PLASAVAIASLDVIRDEKLAER---SAHLGEELRQHLFKIQ 201
             L     E   ++GG       A+AI   + ++ E +  R     +LG++L+     I 
Sbjct: 279 KELV-VVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIEHRVKQVRYLGDKLKAAGVPIV 337

Query: 202 QQFPNYVKEVRGRGLFNAV---EFDKTALPVSAYDIC-LKMKERGILAKPTHDT------ 251
           +    +   +  R     +   EF   +L  S Y    ++  ERGI++   ++       
Sbjct: 338 EPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHR 397

Query: 252 ----IVRLTPPLSISSNE 265
                VRLT P  + +  
Sbjct: 398 PKLETVRLTIPRRVYTYA 415

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	306
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	100.0
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	100.0
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	100.0
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	100.0
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	100.0
3hmu_A	472	Aminotransferase, class III; structural genomics,	100.0
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	100.0
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	100.0
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	100.0
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	100.0
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	100.0
1z7d_A	433	Ornithine aminotransferase; structural genomics co	100.0
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	100.0
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	100.0
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	100.0
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	100.0
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	100.0
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	100.0
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	100.0
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	100.0
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	100.0
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	100.0
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	100.0
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	100.0
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	100.0
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	100.0
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	100.0
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	100.0
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	100.0
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	100.0
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	100.0
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	100.0
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	100.0
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	100.0
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	100.0
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	100.0
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	100.0
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	100.0
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	100.0
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	99.95
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	99.94
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	99.94
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	99.94
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	99.93
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	99.93
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	99.93
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	99.93
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	99.93
1vp4_A	425	Aminotransferase, putative; structural genomics, j	99.93
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	99.93
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	99.93
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	99.93
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	99.93
3nra_A	407	Aspartate aminotransferase; structural genomics, j	99.92
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	99.92
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	99.92
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	99.92
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	99.92
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	99.92
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	99.92
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	99.92
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	99.92
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	99.92
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	99.92
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	99.92
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	99.92
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	99.92
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	99.92
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	99.92
3ele_A	398	Amino transferase; RER070207001803, structural gen	99.92
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	99.92
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	99.92
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	99.92
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	99.92
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	99.92
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	99.92
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	99.92
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	99.92
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	99.92
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	99.92
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	99.92
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	99.92
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	99.91
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	99.91
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	99.91
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	99.91
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	99.91
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	99.91
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	99.91
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	99.91
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	99.91
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	99.91
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	99.91
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	99.91
3rq1_A	418	Aminotransferase class I and II; structural genomi	99.9
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	99.9
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	99.9
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	99.9
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	99.9
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	99.9
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	99.9
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	99.9
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	99.9
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	99.9
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	99.9
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	99.9
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	99.9
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.89
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	99.89
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	99.89
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	99.89
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	99.89
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.89
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	99.89
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	99.89
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	99.81
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	99.89
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	99.89
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	99.88
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	99.88
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	99.88
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	99.88
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	99.88
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	99.88
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	99.88
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.87
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	99.87
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	99.87
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	99.87
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	99.87
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	99.86
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	99.86
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.86
1iug_A	352	Putative aspartate aminotransferase; wild type, py	99.86
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	99.85
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	99.85
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	99.85
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	99.85
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	99.85
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	99.85
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.85
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	99.85
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	99.85
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	99.85
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	99.84
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	99.84
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	99.84
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	99.83
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.83
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.83
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	99.83
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	99.83
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	99.83
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.83
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	99.82
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	99.82
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	99.82
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.82
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	99.82
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.81
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	99.81
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.81
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.81
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.81
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.81
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	99.81
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.81
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.8
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	99.8
1svv_A	359	Threonine aldolase; structural genomics, structura	99.8
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	99.79
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.79
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	99.79
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.79
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	99.79
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	99.79
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	99.79
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.78
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.78
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	99.78
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.78
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.77
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.77
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.77
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	99.77
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.76
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.76
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.76
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	99.75
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	99.75
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.74
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.74
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.74
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.74
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.74
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.73
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.73
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.72
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.72
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.72
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	99.72
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	99.71
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.71
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	99.7
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.7
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	99.7
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.7
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.69
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.69
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	99.67
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.67
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.65
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	99.64
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.64
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	99.63
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.63
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	99.62
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	99.62
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.61
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	99.61
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.6
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.59
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.54
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.53
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.51
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.51
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.51
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.51
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.49
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.47
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.45
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.45
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	99.38
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.37
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.34
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	98.86

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=100.00  E-value=3.7e-44  Score=329.08  Aligned_cols=278  Identities=30%  Similarity=0.579  Sum_probs=244.6

Q ss_pred             cceEEEEecCCCCcccchhcccCCc-cccccCCCCCCCcccccCC-----------CHHHHHHHHHh-----cCCcEEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFG-----------DITALEKIFKE-----SGDQIAGF   64 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----------d~~~le~~i~~-----~~~~~~~v   64 (306)
                      |++||.|+|+|||++.++++++++. .++..+.|..+++..+|++           +.+.+++.++.     +++++++|
T Consensus       151 r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAv  230 (456)
T 4atq_A          151 RDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAI  230 (456)
T ss_dssp             CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEE
T ss_pred             CCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEE
Confidence            6899999999999999999998864 4567777888887666654           34444444432     24679999


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeC
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLAD  144 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~  144 (306)
                      ++||+++.+|.+.++++||++|+++|++||++||+||+++||||+|..|+++++++.||+++++|+++||+ ++|.++++
T Consensus       231 ivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lggg~-P~~av~~~  309 (456)
T 4atq_A          231 IIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMAKGIAGGL-PLSAITGR  309 (456)
T ss_dssp             EECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGTTS-SCEEEEEE
T ss_pred             EeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhhhhcccCcC-CceeeEec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999 99999999


Q ss_pred             HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCC----CceeeEEEeeeEEEE
Q 021893          145 KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFP----NYVKEVRGRGLFNAV  220 (306)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~----~~~~~~~~~g~~~~i  220 (306)
                      +++++.+.+..+++||.+|++++++++++++.+.++++.++.++..++++++|+++...++    +.+.++++.|+++.+
T Consensus       310 ~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~gi  389 (456)
T 4atq_A          310 ADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAI  389 (456)
T ss_dssp             HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEE
T ss_pred             HHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEE
Confidence            9999999999999999999999999999999999999999999999999999999987763    467889999999999


Q ss_pred             EEecCC----ChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          221 EFDKTA----LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       221 ~~~~~~----~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ++..+.    .......+.+.|+++|+++.+.+  .+.|||+|++.+|++++++++++|+++++ ..
T Consensus       390 el~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g~~~~~irl~PpL~it~~~id~~l~~l~~al~-a~  455 (456)
T 4atq_A          390 ELVQPGSKEPNAELTKAVAAACLKEGVIILTCGTYGNVIRLLPPLVISDELLIDGLEVLAAAIK-AH  455 (456)
T ss_dssp             EEBCTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHH-HC
T ss_pred             EEecCCCCCcCHHHHHHHHHHHHHCCCEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-hh
Confidence            986532    12335678999999999988754  57899999999999999999999999997 53

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=100.00  E-value=5.8e-43  Score=322.30  Aligned_cols=275  Identities=29%  Similarity=0.481  Sum_probs=239.9

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC------------------HHHHHHHHHhc-CCcEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD------------------ITALEKIFKES-GDQIA   62 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------------~~~le~~i~~~-~~~~~   62 (306)
                      +++||+|+|+|||.|.+++++++++ +...+.+..+++..++.++                  .+++++.+.+. +++++
T Consensus       160 r~~ii~~~~~yHG~t~~a~s~tg~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iA  238 (473)
T 4e3q_A          160 KRKILTRWNAYHGVTAVSASMTGKP-YNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGADTIA  238 (473)
T ss_dssp             CCEEEEETTCCCCSSHHHHHHSCCG-GGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEE
T ss_pred             cceEEEeeceECCCccccccccccc-cccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCCCceE
Confidence            5789999999999999999999965 4556667777776655542                  35666776653 36799


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeE
Q 021893           63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVL  142 (306)
Q Consensus        63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~  142 (306)
                      +|++||+++.+|.++++++||++|+++|++||++||+||+++||||+|..|+++++++.||+++++|+++||+.|+|.++
T Consensus       239 avi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t~~K~l~gG~~Pl~av~  318 (473)
T 4e3q_A          239 GFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAIISSKNLTAGFFPMGAVI  318 (473)
T ss_dssp             EEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEEECGGGGTTSSCCEEEE
T ss_pred             EEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCChHHhcccccCCCCCccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998844999999


Q ss_pred             eCHHHHhhc-------CCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893          143 ADKEVMLCI-------QPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG  215 (306)
Q Consensus       143 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g  215 (306)
                      +++++++.+       ....|++||++|++++++++++++.+.++++.++++++.++++++|+++...  +.+..+++.|
T Consensus       319 ~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~--~~v~~vRG~G  396 (473)
T 4e3q_A          319 LGPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIAER--PNIGEYRGIG  396 (473)
T ss_dssp             ECHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTTS--TTEEEEEEET
T ss_pred             ccHHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHhcC--CCeeEEeecc
Confidence            999998766       3457899999999999999999999999999999999999999999998654  3678999999


Q ss_pred             eEEEEEEecCCC--------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          216 LFNAVEFDKTAL--------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       216 ~~~~i~~~~~~~--------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +++.+++..+..        ......+.+.|+++|+++.+.+ +.+|++|++.+|++++++++++|+++++ ++
T Consensus       397 l~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g-~~i~l~PPL~it~~eid~~~~~l~~al~-~v  468 (473)
T 4e3q_A          397 FMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPLG-QSVVLCPPFILTEAQMDEMFDKLEKALD-KV  468 (473)
T ss_dssp             TEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHH-HH
T ss_pred             eEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEecC-CEEEEeCCCCCCHHHHHHHHHHHHHHHH-HH
Confidence            999999864321        1225678999999999999874 6899999999999999999999999998 64

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=100.00  E-value=5.9e-41  Score=311.41  Aligned_cols=277  Identities=25%  Similarity=0.436  Sum_probs=242.9

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC----------------HHHHHHHHHhcC-CcEEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD----------------ITALEKIFKESG-DQIAGF   64 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----------------~~~le~~i~~~~-~~~~~v   64 (306)
                      +.+||+++++|||.+.+++++++.+.++..+.|..+++.+++++.                +++||+++++.+ +++++|
T Consensus       146 ~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aav  225 (476)
T 3i5t_A          146 KKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIAAF  225 (476)
T ss_dssp             CCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEE
T ss_pred             CCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence            468999999999999999999998888888888877776655432                889999998643 579999


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccc-cCCCCCcEEEecccccCC-cccceeeE
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD-WEEVRPDMVILGKALGGG-VIPVSAVL  142 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~-~~~~~~d~~s~sK~~~~G-~~~~g~~~  142 (306)
                      ++||+++++|.+++++++|++|+++|++||++||+||+|+||++.|..+.++ .+++.||++++||++++| + |+|+++
T Consensus       226 i~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t~sK~l~~G~~-plg~v~  304 (476)
T 3i5t_A          226 LAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIITFAKGVTSGYV-PLGGLA  304 (476)
T ss_dssp             EECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEEECGGGGTTSS-CCEEEE
T ss_pred             EECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchhhhhhhhcCCCc-CeEEEE
Confidence            9999999999999999999999999999999999999999999999887788 899999999999999999 7 999999


Q ss_pred             eCHHHHhhcCCC-------CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893          143 ADKEVMLCIQPG-------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG  215 (306)
Q Consensus       143 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g  215 (306)
                      +++++++.+.+.       .+..+|++|+++++++.++++.+.++++.++++++.+++++.|+.+. .+ +.+..+++.|
T Consensus       305 ~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~-~~-~~v~~v~~~G  382 (476)
T 3i5t_A          305 ISEAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLR-DL-PGVAETRSVG  382 (476)
T ss_dssp             ECHHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTT-TS-TTEEEEEEET
T ss_pred             ECHHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh-cC-CCeEEEEecC
Confidence            999999988753       56789999999999999999999888899999999999999999653 44 3677899999


Q ss_pred             eEEEEEEecCCCh--------hhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          216 LFNAVEFDKTALP--------VSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       216 ~~~~i~~~~~~~~--------~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      +++++++......        .....+++.|+++||++.+.+ +++|++|++.++++++++++++|+++++ ++.+
T Consensus       383 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRi~p~l~~t~e~i~~~l~~l~~~l~-~~~~  456 (476)
T 3i5t_A          383 LVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPLG-DLCVISPPLIISRAQIDEMVAIMRQAIT-EVSA  456 (476)
T ss_dssp             TEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHH-HHHH
T ss_pred             ceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHH-HHHH
Confidence            9999988753100        025678999999999999976 8999999999999999999999999998 7654

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=100.00  E-value=6.5e-41  Score=306.37  Aligned_cols=265  Identities=22%  Similarity=0.313  Sum_probs=231.5

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      |+|||.|+|+|||++..+.+...+..       ...++..+||||++.+++.++++++++++|++||+++++|.++++++
T Consensus       169 r~~ii~~~~~yHG~t~~~~~~~~~~~-------~~~~~~~~p~nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~  241 (454)
T 4ao9_A          169 RRKIVVFSGGYHGGVLGFGARPSPTT-------VPFDFLVLPYNDAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPD  241 (454)
T ss_dssp             CCEEEEETTCBCSTTCBBSSSBCTTS-------CCSEEEEECTTCHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCHH
T ss_pred             CCeEEEEeCCcCCccccccccccCcc-------CCCCcccCCCchHHHHHHHHhhcCCceEEEEeccccCCCCccCCchh
Confidence            68999999999999988776665422       22345788999999999999998889999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCC----Ccc
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG----EHG  157 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~----~~~  157 (306)
                      ||++|+++|++||++||+||+++|  |.|..+..+++++.||+++++|+++||+ ++|.+.+++++++.+.+.    .++
T Consensus       242 fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~a~e~~gv~PDi~t~gK~lggG~-Piga~~~~~ei~~~~~~~~~~~~h~  318 (454)
T 4ao9_A          242 FLQALRESATQVGALLVFDEVMTS--RLAPHGLANKLGIRSDLTTLGKYIGGGM-SFGAFGGRADVMALFDPRTGPLAHS  318 (454)
T ss_dssp             HHHHHHHHHHHHTCEEEEECTTGG--GGSTTCHHHHHTCCCSEEEEEGGGGTTS-SCEEEEECHHHHGGGCTTTCSCCCC
T ss_pred             hHHHHHHHHhhcCCEEEEECCCcC--CCccccchhccCCCCcEEEeccccCCCC-cceeeeeHHHHHHHHhhccCCcccc
Confidence            999999999999999999999994  8999888899999999999999999999 999999999999988753    578


Q ss_pred             CCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC----------C
Q 021893          158 STFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA----------L  227 (306)
Q Consensus       158 ~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~----------~  227 (306)
                      +||++|++++++++++|+.+.++++.++++++.++++++|+++...++ .+..+++.|+++.+.+.+.+          .
T Consensus       319 ~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~-~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d  397 (454)
T 4ao9_A          319 GTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEG-VAMQFTGIGSLMNAHFVQGDVRSSEDLAAVD  397 (454)
T ss_dssp             CTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHT-BSCEEEEETTEEEEESCCSCCCSGGGGTTCC
T ss_pred             CCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCC-CCEEEeeeceEEEEEEecCCCCCHHHHHhhh
Confidence            899999999999999999998888999999999999999999987764 78899999999999875432          1


Q ss_pred             hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          228 PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       228 ~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      ......+...|+++||++.|.+  .+  .++..+|++|||+++++|++++. ++.
T Consensus       398 ~~~~~~~~~~ll~~Gv~~~p~~--~~--~~s~~~T~~dId~~l~al~~~l~-~~~  447 (454)
T 4ao9_A          398 GRLRQLLFFHLLNEDIYSSPRG--FV--VLSLPLTDADIDRYVAAIGSFIG-GHG  447 (454)
T ss_dssp             HHHHHHHHHHHHHTTEECCTTC--EE--ECCTTCCHHHHHHHHHHHHHHHH-HSG
T ss_pred             HHHHHHHHHHHHHCCEEEcCCC--CE--EEeCCCCHHHHHHHHHHHHHHHH-hcc
Confidence            1224467888999999998853  33  45567899999999999999999 654

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=100.00  E-value=9.5e-40  Score=301.54  Aligned_cols=275  Identities=32%  Similarity=0.608  Sum_probs=241.6

Q ss_pred             cceEEEEecCCCCcccchhcccCCc-cccccCCCCCCCcccccCC------------------CHHHHHHHHHh--cCCc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFG------------------DITALEKIFKE--SGDQ   60 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------------------d~~~le~~i~~--~~~~   60 (306)
                      +.+||+++++|||.+.+++++++.. .++..+.|..+++..+|++                  +++.+++.+++  .+++
T Consensus       148 ~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~  227 (451)
T 3oks_A          148 KPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADN  227 (451)
T ss_dssp             CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGG
T ss_pred             CCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCC
Confidence            4789999999999999999998864 6777787887888777776                  24445555553  2357


Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCccccee
Q 021893           61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSA  140 (306)
Q Consensus        61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~  140 (306)
                      +++|++||+++++|.+.+++++|++|+++|++||++||+||+|+||++.|..+.++.+++.+|++|+||++++|+ |+||
T Consensus       228 ~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~~G~-~iG~  306 (451)
T 3oks_A          228 LAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLIVTAKGIAGGL-PLSA  306 (451)
T ss_dssp             EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTS-SCEE
T ss_pred             EEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCeeeehhhhhCCc-ceEE
Confidence            999999999999999999999999999999999999999999999999998887888999999999999999999 9999


Q ss_pred             eEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEE
Q 021893          141 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV  220 (306)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i  220 (306)
                      +++++++++.+.+..+..+++.|+++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+++.|.++++
T Consensus       307 v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~G~~~~~  385 (451)
T 3oks_A          307 VTGRAEIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDD-RIGDVRGRGAMIAM  385 (451)
T ss_dssp             EEEEHHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT-TEEEEEEETTEEEE
T ss_pred             EEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEEeeEEEEE
Confidence            99999999999888888999999999999999999988888999999999999999999877774 67788999999999


Q ss_pred             EEecC----CChhhHHHHHHHHHHCCceeccCCC--CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          221 EFDKT----ALPVSAYDICLKMKERGILAKPTHD--TIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       221 ~~~~~----~~~~~~~~~~~~l~~~Gi~~~~~~~--~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .+...    +.......+++.|+++||++.|++.  +++|++|++.++++++++++++|+++++
T Consensus       386 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~  449 (451)
T 3oks_A          386 ELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGTYGNVVRFLPPLSIGDDLLNEGLDVLEEVLR  449 (451)
T ss_dssp             EEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred             EEecCccCCCCHHHHHHHHHHHHhCCcEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence            88431    1234577899999999999998654  8999999999999999999999999987

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=100.00  E-value=2.4e-40  Score=306.90  Aligned_cols=274  Identities=26%  Similarity=0.492  Sum_probs=237.9

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-----------------HHHHHHHHHhcC-CcEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKESG-DQIAG   63 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~~~-~~~~~   63 (306)
                      +.+||+++++|||.+.+++++++.+.++..+. ..+++..++.+.                 +++||++|++.+ +++++
T Consensus       148 ~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~-~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aa  226 (472)
T 3hmu_A          148 KTVIISRKNAYHGSTVASSALGGMAGMHAQSG-LIPDVHHINQPNWWAEGGDMDPEEFGLARARELEEAILELGENRVAA  226 (472)
T ss_dssp             CCEEEEETTCCCCSSHHHHHHSCCHHHHHTTC-CCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEE
T ss_pred             CCEEEEEcCcCCCccHHhhhccCChhhccccC-CCCCcEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence            56899999999999999999999887777777 556665555332                 889999998643 57999


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-cccceeeE
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAVL  142 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~g~~~  142 (306)
                      |++||+++++|.+++++++|++|+++|++||++||+||+|+|||+.|..+.++.+++.||++++||+++|| + |+|+++
T Consensus       227 vi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t~sK~l~gg~~-plG~v~  305 (472)
T 3hmu_A          227 FIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMTIAKGLSSGYA-PIGGSI  305 (472)
T ss_dssp             EEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSS-CCEEEE
T ss_pred             EEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCceeeechhhhcCCc-ceEEEE
Confidence            99999999999999999999999999999999999999999999999877788889999999999999976 7 999999


Q ss_pred             eCHHHHhhcCC--CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHH-HHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893          143 ADKEVMLCIQP--GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSA-HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA  219 (306)
Q Consensus       143 ~~~~~~~~~~~--~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~  219 (306)
                      +++++++.+..  ..+..+|++|+++++++.++++.+.++++.++++ ++.+++++.|+++. .++ .+..+++.|++++
T Consensus       306 ~~~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~-~~~-~v~~vr~~G~~~~  383 (472)
T 3hmu_A          306 VCDEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALT-DHP-LVGEAKIVGMMAS  383 (472)
T ss_dssp             EEHHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGG-GST-TEEEEEEETTEEE
T ss_pred             ECHHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh-cCC-CeEEEEecCceEE
Confidence            99999998842  3577789999999999999999998888999999 99999999997764 343 6778999999999


Q ss_pred             EEEecCCC---------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          220 VEFDKTAL---------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       220 i~~~~~~~---------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +.+..+..         ......+++.|+++||++.+.+ +++|++|++..+++++++++++|+++++ ++
T Consensus       384 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRi~p~~~~t~e~i~~~l~~l~~~l~-~~  452 (472)
T 3hmu_A          384 IALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVG-DRMIISPPLVITPAEIDEMFVRIRKSLD-EA  452 (472)
T ss_dssp             EEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHH-HH
T ss_pred             EEEecCccccccccchhHHHHHHHHHHHHHCCcEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHH-HH
Confidence            98864210         1126688999999999999986 8999999999999999999999999987 54

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=100.00  E-value=7.3e-40  Score=302.08  Aligned_cols=278  Identities=28%  Similarity=0.571  Sum_probs=218.9

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC----------------HHHHHHHHHhcCCcEEEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD----------------ITALEKIFKESGDQIAGFL   65 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----------------~~~le~~i~~~~~~~~~v~   65 (306)
                      +.+||+++++|||.+..++++++...+...+.|..+++..+|+++                +++||++|+++++++++|+
T Consensus       136 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi  215 (448)
T 3dod_A          136 KQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAALS  215 (448)
T ss_dssp             CCEEEEEC-----------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEEE
T ss_pred             CCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCCCEEEEE
Confidence            589999999999999999999987777777777777777776654                8999999986556899999


Q ss_pred             Ecccc-CCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeC
Q 021893           66 FEPIQ-GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLAD  144 (306)
Q Consensus        66 v~~~~-~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~  144 (306)
                      +||++ +++|.+++++++|++|+++|++||++||+||+|+||++.|..+..+.+++.+|++++||++++|+.|+|+++++
T Consensus       216 ~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t~sK~l~~G~~~ig~v~~~  295 (448)
T 3dod_A          216 IESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMAAGKGITGGYLPIAVTFAT  295 (448)
T ss_dssp             EESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEEE
T ss_pred             EeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEEecccccCCcCceEEEEEC
Confidence            99998 99999999999999999999999999999999999999998877888899999999999999993399999999


Q ss_pred             HHHHhhcCC-------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893          145 KEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF  217 (306)
Q Consensus       145 ~~~~~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~  217 (306)
                      +++++.+..       ..+..+++.++++++++.++++.+.++++.++++++.+++++.|++ ...++ .+..+++.|.+
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~-l~~~~-~~~~~~~~g~~  373 (448)
T 3dod_A          296 EDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQD-LHALP-HVGDIRQLGFM  373 (448)
T ss_dssp             HHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH-HTTST-TEEEEEEETTE
T ss_pred             HHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH-HhcCC-CeEEEEeeeEE
Confidence            999999876       5677889999999999999999988888999999999999999999 55553 66778899999


Q ss_pred             EEEEEecCCChh--------hHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          218 NAVEFDKTALPV--------SAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       218 ~~i~~~~~~~~~--------~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      +++.+.......        ...++++.|+++||.+.|.+ +++|++|++.++++++++++++|+++++ ++.+
T Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-~~iRi~~~~~~t~e~i~~~l~~l~~~l~-~~~~  445 (448)
T 3dod_A          374 CGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLG-DVIAFLPPLASTAEELSEMVAIMKQAIH-EVTS  445 (448)
T ss_dssp             EEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEET-TEEEECCCTTCCHHHHHHHHHHHHHHHH-HHHT
T ss_pred             EEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEeccC-CEEEEECCCCCCHHHHHHHHHHHHHHHH-HHhc
Confidence            999887532100        14689999999999999975 8999999999999999999999999998 7643

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=100.00  E-value=1.1e-39  Score=301.18  Aligned_cols=277  Identities=32%  Similarity=0.585  Sum_probs=241.0

Q ss_pred             cceEEEEecCCCCcccchhcccCCc-cccccCCCCCCCcccccCC----C-------------HHHHHHHHHhcCCcEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFG----D-------------ITALEKIFKESGDQIAG   63 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----d-------------~~~le~~i~~~~~~~~~   63 (306)
                      +.+||+++++|||.+.+++++++.. .++..+.|..+++..+|++    |             ++.|++.+.  ++++++
T Consensus       151 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~--~~~~aa  228 (453)
T 4ffc_A          151 RPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIG--AQSLAA  228 (453)
T ss_dssp             CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTC--GGGEEE
T ss_pred             CCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcC--CCCEEE
Confidence            4789999999999999999998864 6777777877777666665    4             244444443  257999


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA  143 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~  143 (306)
                      |++||+++++|.+++++++|++|+++|++||++||+||+|+||++.|..+.++.+++.+|+.++||++++|+ |+||+++
T Consensus       229 vi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~sK~~~~G~-~~G~~~~  307 (453)
T 4ffc_A          229 IIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVTMAKGIAGGM-PLSAVTG  307 (453)
T ss_dssp             EEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTS-SCEEEEE
T ss_pred             EEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchHhhhhhhcCCc-CeEEEEE
Confidence            999999999999999999999999999999999999999999999998777788899999999999999998 9999999


Q ss_pred             CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893          144 DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD  223 (306)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~  223 (306)
                      ++++++.+.+..+..+++.|+++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+++.|.++++.+.
T Consensus       308 ~~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~g~~~~~~~~  386 (453)
T 4ffc_A          308 RAELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVD-IIGEVRGRGAMLAIEIV  386 (453)
T ss_dssp             EHHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCS-SEEEEEEETTEEEEEEB
T ss_pred             CHHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEeeceEEEEEEe
Confidence            99999999888888999999999999999999988788999999999999999999877774 67788899999999885


Q ss_pred             cC----CChhhHHHHHHHHHHCCceeccCCC--CEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          224 KT----ALPVSAYDICLKMKERGILAKPTHD--TIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       224 ~~----~~~~~~~~~~~~l~~~Gi~~~~~~~--~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      ..    +.......+++.|+++||++.|++.  +++|++|++.++++++++++++|+++++ ++.+
T Consensus       387 ~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~-~~~~  451 (453)
T 4ffc_A          387 KPGTLEPDAALTKSIAAEALSQGVLILTCGTFGNVIRLLPPLVIGDDLLDEGITALSDIIR-AKAS  451 (453)
T ss_dssp             CTTSCCBCHHHHHHHHHHHHHTTEECCEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHH-HHC-
T ss_pred             cCcccCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence            31    1234577899999999999998654  8999999999999999999999999998 7643

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=100.00  E-value=3.6e-39  Score=297.75  Aligned_cols=274  Identities=30%  Similarity=0.543  Sum_probs=238.4

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCccc--------ccCCC---------HHHHHHHHH-hcCCcEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLK--------VDFGD---------ITALEKIFK-ESGDQIAG   63 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~d---------~~~le~~i~-~~~~~~~~   63 (306)
                      +.+||+++++|||.+..++++++.......+.|..+++..        ++++|         +++||++++ .+++++++
T Consensus       139 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~  218 (452)
T 3n5m_A          139 RYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETIAA  218 (452)
T ss_dssp             CCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEEE
T ss_pred             CCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCEEE
Confidence            4689999999999999999999987777777776666433        34466         999999998 44467999


Q ss_pred             EEEccc-cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-cccceee
Q 021893           64 FLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAV  141 (306)
Q Consensus        64 v~v~~~-~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~g~~  141 (306)
                      |++||+ +| +|.+++++++|++|+++|++||++||+||+|+||++.|..+.++.+++.+|++++||++++| + |+|++
T Consensus       219 vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~~-~ig~~  296 (452)
T 3n5m_A          219 FIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIITMAKGITSAYL-PLSAT  296 (452)
T ss_dssp             EEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGTTSS-CCEEE
T ss_pred             EEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEeecccccCCCc-ceEEE
Confidence            999999 89 99999999999999999999999999999999999999888788899999999999999999 7 99999


Q ss_pred             EeCHHHHhhcCC------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893          142 LADKEVMLCIQP------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG  215 (306)
Q Consensus       142 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g  215 (306)
                      ++++++++.+..      ..+..+++.++++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+++.|
T Consensus       297 ~~~~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g  375 (452)
T 3n5m_A          297 AVKREIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHP-LVGDIRGKG  375 (452)
T ss_dssp             EEEHHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCT-TEEEEEESS
T ss_pred             EECHHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEEEEE
Confidence            999999998853      2467888999999999999999988888999999999999999999876664 677888999


Q ss_pred             eEEEEEEecCCC------hhhHHHHHHHHHHCCceeccCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          216 LFNAVEFDKTAL------PVSAYDICLKMKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       216 ~~~~i~~~~~~~------~~~~~~~~~~l~~~Gi~~~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .++++.+.....      .....++++.|+++||++.|.+      ++++||+|++.++++++++++++|+++++
T Consensus       376 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~  450 (452)
T 3n5m_A          376 LLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTAME  450 (452)
T ss_dssp             SCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence            999998854211      1224578999999999999875      68999999999999999999999999987

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=100.00  E-value=1.9e-39  Score=300.25  Aligned_cols=278  Identities=26%  Similarity=0.457  Sum_probs=242.3

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC------CC------------HHHHHHHHHhcC-CcEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF------GD------------ITALEKIFKESG-DQIA   62 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d------------~~~le~~i~~~~-~~~~   62 (306)
                      +.+||+++++|||.+.+++++++...++..+.+..+++..++.      +|            +++||++|++.+ ++++
T Consensus       144 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~a  223 (460)
T 3gju_A          144 KKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIA  223 (460)
T ss_dssp             CCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEE
T ss_pred             CCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEE
Confidence            4789999999999999999999988777778777777655442      33            689999998543 5799


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-cccceee
Q 021893           63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAV  141 (306)
Q Consensus        63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~g~~  141 (306)
                      +|++||+++++|.+++++++|++|+++|++||++||+||+|+||++.|..+.++.+++.||++++||++++| + |+|++
T Consensus       224 aii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~l~gG~~-~lg~v  302 (460)
T 3gju_A          224 AFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLITIAKGLTSAYA-PLSGV  302 (460)
T ss_dssp             EEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSS-CCEEE
T ss_pred             EEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeeeehhhcCCCC-CeEEE
Confidence            999999999999999999999999999999999999999999999999877778889999999999999988 7 99999


Q ss_pred             EeCHHHHhhc-------CCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEe
Q 021893          142 LADKEVMLCI-------QPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR  214 (306)
Q Consensus       142 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~  214 (306)
                      ++++++++.+       ....+..+++.|+++++++.++++.+.++++.++++++.++++++|.+....++ .+..+++.
T Consensus       303 ~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~  381 (460)
T 3gju_A          303 IVADRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHK-NVGEVRGD  381 (460)
T ss_dssp             EEEHHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEE
T ss_pred             EECHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEeee
Confidence            9999999888       445678899999999999999999988888999999999999999988776664 67788999


Q ss_pred             eeEEEEEEecCCC--------hhhHHHHHHHHHHCCceeccCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          215 GLFNAVEFDKTAL--------PVSAYDICLKMKERGILAKPTH-DTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       215 g~~~~i~~~~~~~--------~~~~~~~~~~l~~~Gi~~~~~~-~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      |.++++.+.....        .....++++.|+++||++.+.+ .+++||+|++..+++++++++++|+++++ ++.
T Consensus       382 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~-~~~  457 (460)
T 3gju_A          382 GMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMPQGDILGFAPPLCLTREQADIVVSKTADAVK-SVF  457 (460)
T ss_dssp             TTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECSSSCEEEECCCTTCCHHHHHHHHHHHHHHHH-HHH
T ss_pred             eEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-HHH
Confidence            9999998874321        1126688999999999999875 48999999999999999999999999998 653

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=100.00  E-value=4.7e-40  Score=303.85  Aligned_cols=274  Identities=29%  Similarity=0.495  Sum_probs=233.5

Q ss_pred             cceEEEEecCCCCcccchhcccC-CccccccCCCCCCCcccccC-------CCHHHHHHHHHhcCCcEEEEEEcc-ccCC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSC-DNEAIRGFGPLLPGHLKVDF-------GDITALEKIFKESGDQIAGFLFEP-IQGE   72 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~i~~~~~~~~~v~v~~-~~~~   72 (306)
                      +.+||+++++|||.+.+++++++ ...+...+.|..+++..++.       +|+++||++|+++++++++|++|| ++++
T Consensus       167 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~ep~~~~~  246 (457)
T 3tfu_A          167 KRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVVEPVVQGA  246 (457)
T ss_dssp             CCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEECSSEECT
T ss_pred             CceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEEeCCCcCC
Confidence            35899999999999999999865 45566677777777666665       489999999997667899999999 9999


Q ss_pred             CCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcC
Q 021893           73 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQ  152 (306)
Q Consensus        73 ~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~  152 (306)
                      +|.+++++++|++|+++|++||++||+||+|+||++.|..+.++.+++.||++|+||+++||+.|+|++++++++++.+.
T Consensus       247 ~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdiit~sK~l~gG~~~lG~v~~~~~i~~~~~  326 (457)
T 3tfu_A          247 GGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIMCVGKALTGGYLSLAATLCTADVAHTIS  326 (457)
T ss_dssp             TTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTSSCCEEEEEEHHHHHHHH
T ss_pred             CCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEEEEChhhhCCCcceEEEEEcHHHHHHhh
Confidence            99999999999999999999999999999999999999988888889999999999999988439999999999998883


Q ss_pred             ---CC--CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC
Q 021893          153 ---PG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL  227 (306)
Q Consensus       153 ---~~--~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~  227 (306)
                         ..  .+..+|.+|+++++++.++++.+.++++.++++++.+++++.|+++. .++ .+..+++.|+++++.+.+   
T Consensus       327 ~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~-~~~-~v~~vr~~G~~~~i~l~~---  401 (457)
T 3tfu_A          327 AGAAGALMHGPTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTAR-ALP-AVTDVRVCGAIGVIECDR---  401 (457)
T ss_dssp             HSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGG-GST-TEEEEEECSSCEEEEESS---
T ss_pred             ccCCCceeEecCCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-cCC-CeeeeecCCeEEEEEECC---
Confidence               33  67788999999999999999999888899999999999999999875 343 566888999999998875   


Q ss_pred             hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          228 PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       228 ~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      ..+..++++.|+++||++.|. .+++|++|++..+++++++++++|+++++ ++.
T Consensus       402 ~~~~~~~~~~l~~~Gv~v~~~-~~~lRi~p~~~~t~eei~~~l~~L~~~l~-~~~  454 (457)
T 3tfu_A          402 PVDLAVATPAALDRGVWLRPF-RNLVYAMPPYICTPAEITQITSAMVEVAR-LVG  454 (457)
T ss_dssp             CCCHHHHHHHHHHTTEECCCB-TTEEEECCCTTCCHHHHHHHHHHHHHHHH-HC-
T ss_pred             cccHHHHHHHHHHCCeEEEec-CCEEEEECCCCCCHHHHHHHHHHHHHHHH-Hhc
Confidence            234778999999999999986 47999999999999999999999999998 764

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=100.00  E-value=2.5e-39  Score=297.21  Aligned_cols=273  Identities=45%  Similarity=0.844  Sum_probs=220.8

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+||+++++|||.+..++.+++.......+.|..+++..+|++|+++||++++.  +++++|+++|+++++|.+++++++
T Consensus       157 ~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~d~~~le~~l~~--~~~~~vi~ep~~~~~G~~~~~~~~  234 (433)
T 1z7d_A          157 AKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKD--PNVCAFIVEPIQGEAGVIVPSDNY  234 (433)
T ss_dssp             CEEEEETTC--------------------------CEEEECTTCHHHHHHHHTS--TTEEEEEECSSBSTTTSBCCCTTH
T ss_pred             CeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCCCCHHHHHHHhCC--CCEEEEEEECCCCCCCccCCCHHH
Confidence            789999999999998888777755555566677778888999999999999952  579999999999999988889999


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-cccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      +++|+++|++||++||+||+|+||++.|..+.++.+++.+|++|+||++++| + |+|++++++++++.+.+..+..+|.
T Consensus       235 l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~~G~~-~~G~v~~~~~~~~~l~~~~~~~t~~  313 (433)
T 1z7d_A          235 LQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVILLGKALSGGHY-PISAVLANDDIMLVIKPGEHGSTYG  313 (433)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSS-CCEEEEECHHHHTTCCTTCCCCTTT
T ss_pred             HHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEEEECccccCCCC-CeEEEEECHHHHhhhccccccccCC
Confidence            9999999999999999999999999999877778888899999999999999 7 9999999999999888777788899


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      +|+++++++.++++.+.++++.++++++++++++.|+++...++ .+..+++.|.++++.++...  .+..++++.|+++
T Consensus       314 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~~~~~~~g~~~~i~~~~~~--~~~~~~~~~l~~~  390 (433)
T 1z7d_A          314 GNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSK-IVRDVRGKGLLCAIEFKNEL--VNVLDICLKLKEN  390 (433)
T ss_dssp             TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCT-TEEEEEEETTEEEEEECTTT--CCHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeeeeEEEEEEccCh--hHHHHHHHHHHHC
Confidence            99999999999999988778999999999999999998754553 45567889999999887421  2467899999999


Q ss_pred             CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      ||.+.|.+.+++|++|++.++++++++++++|+++++ ++.
T Consensus       391 Gv~v~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~-~~~  430 (433)
T 1z7d_A          391 GLITRDVHDKTIRLTPPLCITKEQLDECTEIIVKTVK-FFD  430 (433)
T ss_dssp             TEECCEETTTEEEECCCTTCCHHHHHHHHHHHHHHHH-HHC
T ss_pred             CeEEecCCCCEEEEECCcCCCHHHHHHHHHHHHHHHH-HHH
Confidence            9999997788999999999999999999999999988 653

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=100.00  E-value=3.2e-39  Score=292.82  Aligned_cols=269  Identities=32%  Similarity=0.596  Sum_probs=245.4

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+||+++++|||.+..+..+++...+...+.|...++..++++|+++||++++   +++++|+++|+++++|.++++++
T Consensus       124 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~~~~G~~~~~~~  200 (395)
T 3nx3_A          124 GGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYNDISSVEKLVN---EKTCAIILESVQGEGGINPANKD  200 (395)
T ss_dssp             TCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTTCHHHHHTTCC---TTEEEEEEESEECTTSCEECCHH
T ss_pred             CCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCCCHHHHHHhcc---CCeEEEEEeCccCCCCcccCCHH
Confidence            478999999999999999999988777888888888889999999999999997   57999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHH-HhhcCCCCccCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEV-MLCIQPGEHGSTF  160 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~-~~~~~~~~~~~~~  160 (306)
                      ++++|.++|++||++||+||+|+||++.|..+..+.+++.+|+.++||++++|+ |+|++++++++ ++.+.+..+..++
T Consensus       201 ~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G~-~~G~~~~~~~~~~~~~~~~~~~~~~  279 (395)
T 3nx3_A          201 FYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTSAKALGCGL-SVGAFVINQKVASNSLEAGDHGSTY  279 (395)
T ss_dssp             HHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGTTTS-CCEEEEECHHHHHHHSCTTCCSSCB
T ss_pred             HHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEEEecccccCCC-ceEEEEEchhhhhhhcCCcccCCCC
Confidence            999999999999999999999999999988777788899999999999999999 99999999999 8888887778889


Q ss_pred             CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH
Q 021893          161 GGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE  240 (306)
Q Consensus       161 ~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~  240 (306)
                      ..++++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+++.|.++++.++.   .....++++.|++
T Consensus       280 ~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~g~~~~~~~~~---~~~~~~~~~~l~~  355 (395)
T 3nx3_A          280 GGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFD-FCKKRKGLGFMQGLSLDK---SVKVAKVIQKCQE  355 (395)
T ss_dssp             SCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT-TEEEEEEETTEEEEEECT---TSCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeEEEEEEEEeCC---cchHHHHHHHHHH
Confidence            999999999999999887778899999999999999999877664 566778899999998875   2357789999999


Q ss_pred             CCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       241 ~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +||.+.+++.+++|++|+...+++++++++++|+++++
T Consensus       356 ~Gi~v~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~  393 (395)
T 3nx3_A          356 NALLLISCGENDLRFLPPLILQKEHIDEMSEKLRKALK  393 (395)
T ss_dssp             TTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence            99999998889999999999999999999999999987

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=100.00  E-value=5e-39  Score=295.72  Aligned_cols=269  Identities=51%  Similarity=0.908  Sum_probs=238.1

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+||+++++|||.+..++.+++.+.+...+.|...++..+|++|+++||++++.  +++++|+++|+++++|.+++++++
T Consensus       168 ~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~d~~~le~~l~~--~~~~~vi~ep~~~~~G~~~~~~~~  245 (439)
T 2oat_A          168 AKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQD--PNVAAFMVEPIQGEAGVVVPDPGY  245 (439)
T ss_dssp             CEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSSCHHHHHHHTTS--TTEEEEEECSSBTTTTSBCCCTTH
T ss_pred             CeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCCCHHHHHHHhCC--CCEEEEEEECCCCCCCCcCCCHHH
Confidence            689999999999999888887766666777787788888999999999999962  579999999999999988899999


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-cccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      +++|+++|++||++||+||+|+||++.|..+.++.+++.+|++|+||++++| + |+|++++++++++.+.+..+..+|.
T Consensus       246 l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~t~sK~l~~G~~-~~G~v~~~~~~~~~l~~~~~~~t~~  324 (439)
T 2oat_A          246 LMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALSGGLY-PVSAVLCDDDIMLTIKPGEHGSTYG  324 (439)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSS-CCEEEEECHHHHTTSCTTSSCCSST
T ss_pred             HHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcEEEecccccCCCC-CeEEEEECHHHHhccCCCCcccCCC
Confidence            9999999999999999999999999999877778888999999999999999 7 9999999999999888777788999


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      +|+++++++.++++.+.++++.++++++++++++.|+++.  ++ .+..+++.|.++++.++... ..+..++++.|+++
T Consensus       325 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~--~~-~~~~~~~~g~~~~v~l~~~~-~~~~~~l~~~l~~~  400 (439)
T 2oat_A          325 GNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLP--SD-VVTAVRGKGLLNAIVIKETK-DWDAWKVCLRLRDN  400 (439)
T ss_dssp             TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTSC--TT-TEEEEEEETTEEEEEECCCS-SCCHHHHHHHHHHT
T ss_pred             cCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhc--CC-CcEEEEeeeeEEEEEEecCc-cHHHHHHHHHHHHC
Confidence            9999999999999998877889999999999999998862  32 45567888999999887421 13467899999999


Q ss_pred             CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ||.+.|.+++++|++|++.++++++++++++|+++++
T Consensus       401 Gv~v~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~  437 (439)
T 2oat_A          401 GLLAKPTHGDIIRFAPPLVIKEDELRESIEIINKTIL  437 (439)
T ss_dssp             TEECCBSSSSEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred             CeEEecCCCCEEEEECccCCCHHHHHHHHHHHHHHHH
Confidence            9999998789999999999999999999999999887

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=100.00  E-value=3e-39  Score=298.86  Aligned_cols=277  Identities=26%  Similarity=0.444  Sum_probs=237.4

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-----------------HHHHHHHHHhcC-CcEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-----------------ITALEKIFKESG-DQIAG   63 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----------------~~~le~~i~~~~-~~~~~   63 (306)
                      +.+||+++++|||.+.+++++++...++..+.+..+++..++.+.                 +++||+++++.+ +++++
T Consensus       143 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~~~~  222 (459)
T 4a6r_A          143 KKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLEEKILEIGADKVAA  222 (459)
T ss_dssp             CCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEE
T ss_pred             CCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHHcCCCCEEE
Confidence            468999999999999999999998877777878777776655332                 889999998643 57999


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-cccceeeE
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAVL  142 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~g~~~  142 (306)
                      |++||+++++|.+++++++|++|+++|++||++||+||+|+||++.|..+.++.+++.||++++||++++| + |+|+++
T Consensus       223 vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t~sK~l~gg~~-~lg~v~  301 (459)
T 4a6r_A          223 FVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFTAAKGLSSGYL-PIGAVF  301 (459)
T ss_dssp             EEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSS-CCEEEE
T ss_pred             EEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeehhhhhcCCCC-Ccccee
Confidence            99999999999999999999999999999999999999999999999877778889999999999999977 7 999999


Q ss_pred             eCHHHHhhcC---CCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHH-HHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893          143 ADKEVMLCIQ---PGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSA-HLGEELRQHLFKIQQQFPNYVKEVRGRGLFN  218 (306)
Q Consensus       143 ~~~~~~~~~~---~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~-~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~  218 (306)
                      +++++++.+.   ...+..+|+.|+++++++.++++.+.++++.++++ ++.+++++.|.+....++ .+..+++.|+++
T Consensus       302 ~~~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~g~~~  380 (459)
T 4a6r_A          302 VGKRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFE-HVDDVRGVGMVQ  380 (459)
T ss_dssp             ECHHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCT-TEEEEEEETTEE
T ss_pred             eCHHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEEEEEEEE
Confidence            9999998886   55577788999999999999999988788999999 999999999944334443 677889999999


Q ss_pred             EEEEecCCC--------hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          219 AVEFDKTAL--------PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       219 ~i~~~~~~~--------~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      ++.+.....        .....++++.|+++||++.+.+ +++|++|++..+++++++++++|+++++ ++.
T Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRi~~~~~~t~e~i~~~l~~l~~~l~-~~~  450 (459)
T 4a6r_A          381 AFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACG-DHIVSAPPLVMTRAEVDEMLAVAERCLE-EFE  450 (459)
T ss_dssp             EEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHH-HHH
T ss_pred             EEEEecCccccccccchHHHHHHHHHHHHHCCeEEecCC-CEEEEECCCCCCHHHHHHHHHHHHHHHH-HHH
Confidence            998874210        1226789999999999999976 8999999999999999999999999998 653

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=100.00  E-value=1.6e-38  Score=292.21  Aligned_cols=278  Identities=28%  Similarity=0.530  Sum_probs=236.3

Q ss_pred             cceEEEEecCCCCcccchhcccCCcc--ccccCCCCCCCcccccCC----------CHHHHHHHHH-hcCCcEEEEEEcc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNE--AIRGFGPLLPGHLKVDFG----------DITALEKIFK-ESGDQIAGFLFEP   68 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~----------d~~~le~~i~-~~~~~~~~v~v~~   68 (306)
                      +.+||+++++|||.+..++.+++...  +...+.|..+++..+|++          |+++||++++ .+++++++|+++|
T Consensus       130 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p  209 (439)
T 3dxv_A          130 RSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEP  209 (439)
T ss_dssp             CCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECS
T ss_pred             CCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEEEcc
Confidence            46899999999999999998888654  666666666667777776          6999999994 3346799999999


Q ss_pred             ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893           69 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM  148 (306)
Q Consensus        69 ~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~  148 (306)
                      +++++|.+.++++++++|.++|++||++||+||+|+||++.|..+..+.+++.+|++|+||++++|+ |+||++++++++
T Consensus       210 ~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~s~sK~~~~G~-riG~~~~~~~~~  288 (439)
T 3dxv_A          210 IQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDILVLGKGLGGGL-PLSAVIAPAEIL  288 (439)
T ss_dssp             SBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEEEECGGGGTTS-CCEEEEEEHHHH
T ss_pred             ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEEEEcchhcCCc-ceEEEEECHHHH
Confidence            9999999999999999999999999999999999999988888777788899999999999999999 999999999999


Q ss_pred             hhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecC---
Q 021893          149 LCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT---  225 (306)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~---  225 (306)
                      +.+.+..+..++ .++++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+++.|.++++.+...   
T Consensus       289 ~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~  366 (439)
T 3dxv_A          289 DCASAFAMQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHP-LIGDIRGRGLACGMELVCDRQS  366 (439)
T ss_dssp             TSCSSSSCCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT-TEEEEEEETTEEEEEEEEETTT
T ss_pred             hhhcCCCcCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEEEEEEEEEEecCccc
Confidence            999887778888 99999999999999888788899999999999999999887764 6677888999999988421   


Q ss_pred             --CChhhHHHHHHHHHHCCceeccCCC--CEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          226 --ALPVSAYDICLKMKERGILAKPTHD--TIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       226 --~~~~~~~~~~~~l~~~Gi~~~~~~~--~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                        +......++++.|+++||.+.+++.  +++|++|++..+++++++++++|+++++ ++.+
T Consensus       367 ~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~-~~~~  427 (439)
T 3dxv_A          367 REPARAETAKLIYRAYQLGLVVYYVGMNGNVLEFTPPLTITETDIHKALDLLDRAFS-ELSA  427 (439)
T ss_dssp             TEECHHHHHHHHHHHHHHTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHHH-TGGG
T ss_pred             cCCCHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-HHhc
Confidence              0134577899999999999998754  8999999999999999999999999999 7754

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=100.00  E-value=6.3e-38  Score=287.52  Aligned_cols=277  Identities=31%  Similarity=0.539  Sum_probs=216.6

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCC--CcccccCCC--------HHHHHHHHHhcC-CcEEEEEEcccc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP--GHLKVDFGD--------ITALEKIFKESG-DQIAGFLFEPIQ   70 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d--------~~~le~~i~~~~-~~~~~v~v~~~~   70 (306)
                      +.+||+++++|||.+..+..+++.......+.|..+  ++..+|+++        +++||++|++++ +++++|+++|++
T Consensus       121 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~  200 (430)
T 3i4j_A          121 RFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPVV  200 (430)
T ss_dssp             CCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSSC
T ss_pred             CcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence            468999999999999998888887666677777777  777788764        499999998643 578999999999


Q ss_pred             C-CCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC-CCCCcEEEecccccCC-cccceeeEeCHHH
Q 021893           71 G-EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE-EVRPDMVILGKALGGG-VIPVSAVLADKEV  147 (306)
Q Consensus        71 ~-~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~-~~~~d~~s~sK~~~~G-~~~~g~~~~~~~~  147 (306)
                      + ++|.++++++++++|.++|++||++||+||+|+||++.|..++++.+ ++.+|++++||++++| + |+||+++++++
T Consensus       201 ~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~sK~l~~G~~-r~G~~~~~~~i  279 (430)
T 3i4j_A          201 GASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLGKGLAAGYA-PLAGLLAAPQV  279 (430)
T ss_dssp             CGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEECGGGTTTSS-CCEEEEECHHH
T ss_pred             cCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEcccccCCcc-ccEEEEECHHH
Confidence            9 99999999999999999999999999999999999999987778888 8999999999999999 8 99999999999


Q ss_pred             HhhcCCC----CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893          148 MLCIQPG----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD  223 (306)
Q Consensus       148 ~~~~~~~----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~  223 (306)
                      ++.+...    .+..+++.++++++++.++++.+.++++.++++++.+++++.|+++...++ .+..+++.|.++++.+.
T Consensus       280 ~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~g~~~~~~~~  358 (430)
T 3i4j_A          280 YETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFP-QMMQVRGTGLLLGVVLG  358 (430)
T ss_dssp             HHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT-TEEEEEEETTEEEEEEC
T ss_pred             HHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEEEEEEEEEec
Confidence            9888653    567888999999999999999988788999999999999999999876764 66778889999999886


Q ss_pred             cCCC------hhhHHHHHHHHHHCCceeccC-------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          224 KTAL------PVSAYDICLKMKERGILAKPT-------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       224 ~~~~------~~~~~~~~~~l~~~Gi~~~~~-------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +...      .....++++.|+++||.+.|+       +++++|+++++..+++++++++++|+++++ ++
T Consensus       359 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~-~~  428 (430)
T 3i4j_A          359 DLATGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAGALE-DV  428 (430)
T ss_dssp             ------------CHHHHHHHHHHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHHHHHHH-HH
T ss_pred             cccccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-Hh
Confidence            3110      122467999999999999986       367999999999999999999999999998 64

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=100.00  E-value=4.9e-38  Score=287.58  Aligned_cols=272  Identities=33%  Similarity=0.587  Sum_probs=233.7

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+||+++++|||.+..++.+++.......+.|..+++..+|++|+++||++++   +++++|+++|+++++|.++++.++
T Consensus       147 ~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~le~~i~---~~~~~vi~~p~~~~gG~~~~~~~~  223 (420)
T 2pb2_A          147 TKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVKAVMD---DHTCAVVVEPIQGEGGVQAATPEF  223 (420)
T ss_dssp             CEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTTCHHHHHHHCC---TTEEEEEECSEETTTTSEECCHHH
T ss_pred             CEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCCCHHHHHHHhc---cCceEEEEeCCcCCCCeecCCHHH
Confidence            48999999999999988888776556667778888888899999999999997   479999999999888877889999


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCC
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGG  162 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~  162 (306)
                      +++|+++|++||++||+||+|+|+++.|..+.++.+++.+|++|+||++++|+ |+|++++++++++.+....+..+++.
T Consensus       224 l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~diit~sK~l~~G~-~iG~~~~~~~l~~~l~~~~~~~t~~~  302 (420)
T 2pb2_A          224 LKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGF-PVSAMLTTQEIASAFHVGSHGSTYGG  302 (420)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTS-CCEEEEECHHHHTTCC----CCEECC
T ss_pred             HHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeEEecccccCCC-ceEEEEEhHHHHHhhcCCCcCcccCc
Confidence            99999999999999999999999998888766667788899999999999999 99999999999888877667778889


Q ss_pred             CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCC
Q 021893          163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG  242 (306)
Q Consensus       163 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~G  242 (306)
                      ++++++++.++++.+.++++.++++++++++++.|+++...++ .+..+++.|.++++.++... .....++++.|+++|
T Consensus       303 ~~~~~aa~~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~v~~~~~~-~~~~~~l~~~l~~~G  380 (420)
T 2pb2_A          303 NPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFD-IFSDIRGMGLLIGAELKPKY-KGRARDFLYAGAEAG  380 (420)
T ss_dssp             CHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHC-CEEEEEEETTEEEEEECGGG-TTCHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEEecceEEEEEECCCc-hHHHHHHHHHHHHCC
Confidence            9999999999999887777899999999999999998753333 44567788999999887410 014678999999999


Q ss_pred             ceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          243 ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       243 i~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      |.+.+++++++|++|++..+++++++++++|+++++ ++
T Consensus       381 i~v~~~~~~~iRl~~~~~~t~eei~~~~~~l~~~l~-~~  418 (420)
T 2pb2_A          381 VMVLNAGADVMRFAPSLVVEEADIHEGMQRFAQAVG-KV  418 (420)
T ss_dssp             EECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHHH-HH
T ss_pred             CEEEeCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-HH
Confidence            999998788999999999999999999999999987 53

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=100.00  E-value=1.4e-37  Score=286.81  Aligned_cols=271  Identities=29%  Similarity=0.453  Sum_probs=232.8

Q ss_pred             cceEEEEecCCCCcccchhcccCC-ccccccCCCCCCCcccccCCC--HHH-------------HHHHHHhcCCcEEEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLPGHLKVDFGD--ITA-------------LEKIFKESGDQIAGFL   65 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d--~~~-------------le~~i~~~~~~~~~v~   65 (306)
                      +.+||+++++|||.+..++++++. +.++..+.|..+++..+|++|  .+.             ||++++++++++++|+
T Consensus       157 ~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi  236 (449)
T 2cjg_A          157 GTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFV  236 (449)
T ss_dssp             CCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEE
T ss_pred             CCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcCCceEEEE
Confidence            568999999999999999988886 455667777777788888887  443             8999976556899999


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCH
Q 021893           66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADK  145 (306)
Q Consensus        66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~  145 (306)
                      ++|+++++|.++++++++++|+++|++||++||+||+|+|+++.|..+.++.+++.+|++++||++     |+|++++++
T Consensus       237 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l-----~iG~~~~~~  311 (449)
T 2cjg_A          237 AEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKT-----QVCGVMAGR  311 (449)
T ss_dssp             ECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGG-----SSEEEEECG
T ss_pred             EeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCceEEEecCcc-----cEEEEEECH
Confidence            999999999889999999999999999999999999999999998876667778899999999988     789999999


Q ss_pred             HHHhhc-----CCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEE
Q 021893          146 EVMLCI-----QPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV  220 (306)
Q Consensus       146 ~~~~~~-----~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i  220 (306)
                      ++++.+     ....+..++++|+++++++.++++.+.++++.+++++++++++++|+++...++..+..+++.|.++++
T Consensus       312 ~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g~~~~~  391 (449)
T 2cjg_A          312 RVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAF  391 (449)
T ss_dssp             GGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEETTEEEE
T ss_pred             HHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeeccEEEEE
Confidence            998863     334566788899999999999999887778899999999999999999865554215567788999998


Q ss_pred             EEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          221 EFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       221 ~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .+..   .....++++.|+++||.+.+++.+++|++|++.++++++++++++|+++++ ++
T Consensus       392 ~~~~---~~~~~~~~~~l~~~Gv~v~~~g~~~iRi~~~~~~t~e~i~~~l~~l~~~l~-~~  448 (449)
T 2cjg_A          392 SLPT---TADRDELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSALP-VV  448 (449)
T ss_dssp             ECSS---HHHHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHH-HH
T ss_pred             EECC---hHHHHHHHHHHHHCCeEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-Hh
Confidence            7763   335678999999999999998789999999999999999999999999987 53

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=100.00  E-value=1.9e-37  Score=284.73  Aligned_cols=276  Identities=25%  Similarity=0.375  Sum_probs=230.7

Q ss_pred             cceEEEEecCCCCcccchhcccCCcccccc--CCCCC-----CCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRG--FGPLL-----PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG   74 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G   74 (306)
                      +.+||+++++|||.+..++..++.......  ..+..     ..+..+|++|+++||++++++++++++|+++|+++++|
T Consensus       137 ~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G  216 (434)
T 3l44_A          137 RTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVEPIVGNFG  216 (434)
T ss_dssp             CCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTS
T ss_pred             CCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEcCCCCCCC
Confidence            468999999999999998887774322111  11111     24577889999999999997666899999999999999


Q ss_pred             cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC-
Q 021893           75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP-  153 (306)
Q Consensus        75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~-  153 (306)
                      .++++++++++|+++|++||++||+||+|+|| +.|..+.++.+++.+|+.++||++++|+ |+|++++++++++.+.+ 
T Consensus       217 ~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~~G~-~iG~~~~~~~i~~~~~~~  294 (434)
T 3l44_A          217 IVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGVTPDLTALGKVIGGGL-PIGAYGGKKEIMEQVAPL  294 (434)
T ss_dssp             CBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTCCCSEEEEEGGGGTTS-SCEEEEECHHHHTTBTTT
T ss_pred             CccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCCCCCeeehhhhhcCCc-CeeeEEEcHHHHHhhccC
Confidence            99999999999999999999999999999999 8887777788899999999999999999 99999999999998876 


Q ss_pred             --CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-----
Q 021893          154 --GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----  226 (306)
Q Consensus       154 --~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-----  226 (306)
                        ..+..+++.++++++++.++++.+.++++.++++++.+++++.|+++...++ ....+++.|.++++.+....     
T Consensus       295 ~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~  373 (434)
T 3l44_A          295 GPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHN-IDITLNRLKGALTVYFTTNTIEDYD  373 (434)
T ss_dssp             SSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEETTEEEEEESSSCCCSHH
T ss_pred             CCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEeeccEEEEEEecCcccchh
Confidence              3467789999999999999999988778999999999999999999876653 55678889999999884321     


Q ss_pred             -----ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          227 -----LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       227 -----~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                           ......++++.|+++||.+.+++.+.+|++  +..+++++++++++|+++++ ++.+
T Consensus       374 ~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~rl~--~~~t~e~i~~~l~~l~~~l~-~~~~  432 (434)
T 3l44_A          374 AAQDTDGEMFGKFFKLMLQEGVNLAPSKYEAWFLT--TEHTKEDIEYTIEAVGRAFA-ALAD  432 (434)
T ss_dssp             HHHHSCHHHHHHHHHHHHHTTEECCSSTTCCEECC--TTCCHHHHHHHHHHHHHHHH-HHHH
T ss_pred             hccccCHHHHHHHHHHHHHCCeEEeecCCCcEEEe--cccCHHHHHHHHHHHHHHHH-HHHh
Confidence                 122346789999999999999877888985  78999999999999999998 7643

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=100.00  E-value=3.4e-38  Score=308.07  Aligned_cols=278  Identities=21%  Similarity=0.354  Sum_probs=222.1

Q ss_pred             cceEEEEecCCCCcccchhcccCCcccccc-CCCCC---------------CCccc--cc------------CCCH----
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRG-FGPLL---------------PGHLK--VD------------FGDI----   47 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~-~~~~~---------------~~~~~--~~------------~~d~----   47 (306)
                      |++||+++++|||.|++++++++...+... +.|++               +++..  .|            |+|.    
T Consensus       483 r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  562 (831)
T 4a0g_A          483 VVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIF  562 (831)
T ss_dssp             CEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHH
T ss_pred             ccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhh
Confidence            569999999999999999999997555431 11221               11111  11            2332    


Q ss_pred             --------------HHHHHHHHh-----cCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc
Q 021893           48 --------------TALEKIFKE-----SGDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA  107 (306)
Q Consensus        48 --------------~~le~~i~~-----~~~~~~~v~v~~~-~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~  107 (306)
                                    +.||+.|++     +++++++|++||+ ++.+|.++++++||++|+++|++||++||+||+|+|||
T Consensus       563 ~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfG  642 (831)
T 4a0g_A          563 DKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFW  642 (831)
T ss_dssp             CGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTT
T ss_pred             cccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccc
Confidence                          567887763     3578999999997 99999999999999999999999999999999999999


Q ss_pred             ccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCC------CccCCCCCCHHHHHHHHHHHHHHhhcc
Q 021893          108 RSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG------EHGSTFGGNPLASAVAIASLDVIRDEK  181 (306)
Q Consensus       108 ~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~aa~~al~~~~~~~  181 (306)
                      +.|..|+++++++.||++|+||+++||+.|+|++++++++++.+...      .+..||.+|++++++++++++.+.+++
T Consensus       643 RtG~~fa~e~~gv~PDiitlsK~L~gG~~Plgav~~~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~  722 (831)
T 4a0g_A          643 RLGVETTTELLGCKPDIACFAKLLTGGMVPLAVTLATDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPE  722 (831)
T ss_dssp             TTSBSSTHHHHSSCCSEEEECGGGGTTSSCCEEEEECHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTT
T ss_pred             cCCCchhhHhcCCCCcEEEEecccccCccCcEEEEECHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhH
Confidence            99999988999999999999999999944999999999999988653      378899999999999999999998776


Q ss_pred             HHHHHHHHHHHHHH----HHHHHHhhCCCceeeEEEeeeEEEEEEecCC-----ChhhHHHHHHHHHHCCceeccCCCCE
Q 021893          182 LAERSAHLGEELRQ----HLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----LPVSAYDICLKMKERGILAKPTHDTI  252 (306)
Q Consensus       182 ~~~~~~~~~~~l~~----~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-----~~~~~~~~~~~l~~~Gi~~~~~~~~~  252 (306)
                      +.++++++.+++++    .+.+....+ +.+..+++.|+++.+++..+.     .......+.+.|+++||++.|. .+.
T Consensus       723 l~~~~~~~~~~l~~~l~~~l~~~l~~~-~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~p~-g~~  800 (831)
T 4a0g_A          723 TNHNITSQGKTLRELWDEELVQQISSH-SAVQRVVVIGTLFALELKADASNSGYASLYAKSLLIMLREDGIFTRPL-GNV  800 (831)
T ss_dssp             TCTTBCTTSSBBCCCSCHHHHHHHHHS-TTEEEEEEETTEEEEEEC---------CHHHHHHHHHHHHTTEECCCB-TTE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhC-CCceeEeecccEEEEEEecCccccccchHHHHHHHHHHHHCCcEEEec-CCE
Confidence            66666555555432    333333444 378899999999999986421     1124667899999999999987 479


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          253 VRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       253 lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      ||++|++.+++++|++++++|+++++ ++.
T Consensus       801 lrl~pp~~~t~e~id~~~~~l~~~l~-~l~  829 (831)
T 4a0g_A          801 IYLMCGPCTSPEICRRLLTKLYKRLG-EFN  829 (831)
T ss_dssp             EEEECCTTCCHHHHHHHHHHHHHHHT-TTC
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHH-Hhc
Confidence            99999999999999999999999998 663

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=100.00  E-value=2e-36  Score=277.67  Aligned_cols=276  Identities=29%  Similarity=0.518  Sum_probs=227.8

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccc--------cCC---------CHHHHHHHHHhcC-CcEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKV--------DFG---------DITALEKIFKESG-DQIAG   63 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~---------d~~~le~~i~~~~-~~~~~   63 (306)
                      +.+||+++++|||.+..++..++.. ++..+.|...++..+        +++         |++.||+++++++ +++++
T Consensus       128 ~~~vi~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~  206 (433)
T 1zod_A          128 KYEIVGFAQSWHGMTGAAASATYSA-GRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAA  206 (433)
T ss_dssp             CCEEEEETTCCCCSSHHHHHTCCSS-CCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEE
T ss_pred             CCeEEEECCCcCCCChhHHhhcCCc-cccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEE
Confidence            3589999999999999888877643 334444444454333        334         3899999998643 47899


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA  143 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~  143 (306)
                      |+++|+++++|.++++++++++|+++|++||++||+||+|+||++.|..+.++.+++.+|++|+||++++|+ |+||+++
T Consensus       207 vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~s~sK~~~~G~-~ig~~~~  285 (433)
T 1zod_A          207 FIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLGAGL-PLAAIVT  285 (433)
T ss_dssp             EEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECHHHHTTS-SCEEEEE
T ss_pred             EEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEEEecccccCCC-CeeEEEE
Confidence            999999999998889999999999999999999999999999988887666677788899999999999998 9999999


Q ss_pred             CHHHHhhcCCC--CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893          144 DKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE  221 (306)
Q Consensus       144 ~~~~~~~~~~~--~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~  221 (306)
                      ++++++.+...  .+..+++.|+++++++.++++.+.++++.+++++++++++++|+++...++ .+..+++.|.++++.
T Consensus       286 ~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~-~~~~~~~~g~~~~i~  364 (433)
T 1zod_A          286 SAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFD-CIGDVRGRGLLLGVE  364 (433)
T ss_dssp             CHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT-TEEEEEEETTEEEEE
T ss_pred             hHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEEEEEEEEE
Confidence            99998887653  244788889999999999999888778899999999999999998865553 455677889999998


Q ss_pred             EecCC-----ChhhHHHHHHHHHHCCceeccCC--C--CEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          222 FDKTA-----LPVSAYDICLKMKERGILAKPTH--D--TIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       222 ~~~~~-----~~~~~~~~~~~l~~~Gi~~~~~~--~--~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +....     ......++++.|+++||.+.++.  .  +++|++|++..+++++++++++|+++++ ++
T Consensus       365 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~-~~  432 (433)
T 1zod_A          365 IVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIE-RA  432 (433)
T ss_dssp             EEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHHHH-HH
T ss_pred             EecCccccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHHHHH-Hh
Confidence            86411     01346789999999999999864  2  8999999999999999999999999987 53

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=100.00  E-value=5.1e-36  Score=274.62  Aligned_cols=271  Identities=26%  Similarity=0.426  Sum_probs=229.8

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCC--------cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG--------HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEA   73 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~   73 (306)
                      +.+||+++++|||.+..++..++........ |..++        +..+|++|+++||++++++++++++|+++|+++++
T Consensus       134 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~p~~~~~  212 (427)
T 3fq8_A          134 RDKIIKFEGCYHGHADMFLVKAGSGVATLGL-PSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNS  212 (427)
T ss_dssp             CCEEEEEETCCCCSCGGGCSSCCTHHHHHTC-CSCSSSCHHHHTTEEEEETTCHHHHHHHHHHSTTTEEEEEECSSBCTT
T ss_pred             CCEEEEECCCcCCCCHHHHHhcCCcccccCC-CCCCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCcCCC
Confidence            4689999999999998888777754332221 33332        56788999999999999876789999999999999


Q ss_pred             CcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC
Q 021893           74 GVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP  153 (306)
Q Consensus        74 G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~  153 (306)
                      |.+.++++++++|+++|++||++||+||+|+|| +.|..+..+.+++.+|+.|+||++++|+ |+|++++++++++.+.+
T Consensus       213 G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~~G~-~~G~~~~~~~~~~~~~~  290 (427)
T 3fq8_A          213 GFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGGVQEKFGVTPDLTTLGKIIGGGL-PVGAYGGKREIMQLVAP  290 (427)
T ss_dssp             SCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTCCCSEEEECGGGGTTS-SCEEEEECHHHHTTBTT
T ss_pred             CCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchhhHhcCCCCChhhhhhhhhCCc-ceEEEEEcHHHHHhhcc
Confidence            999999999999999999999999999999999 8887777778899999999999999999 99999999999998875


Q ss_pred             C---CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC----
Q 021893          154 G---EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA----  226 (306)
Q Consensus       154 ~---~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~----  226 (306)
                      .   .+..+++.++++++++.++++.+.++++.++++++.+++++.|+++...++ ....+++.|.++++.+....    
T Consensus       291 ~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~  369 (427)
T 3fq8_A          291 AGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETG-HAACGGQVSGMFGFFFTEGPVHNY  369 (427)
T ss_dssp             TSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTT-CCCEEEEETTEEEEESSSCCCCSH
T ss_pred             CCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeeeEEEEEEecCccccc
Confidence            3   467788889999999999999988788999999999999999999876653 55577889999999876421    


Q ss_pred             ------ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          227 ------LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       227 ------~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                            ......++++.|+++||.+.+++..  |+.++..++++++++++++|+++++
T Consensus       370 ~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~~--r~~~~~~~t~e~i~~~l~~l~~~l~  425 (427)
T 3fq8_A          370 EDAKKSDLQKFSRFHRGMLEQGIYLAPSQFE--AGFTSLAHTEEDIDATLAAARTVMS  425 (427)
T ss_dssp             HHHTTSCHHHHHHHHHHHHHTTEECCSSTTS--CEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             cccccccHHHHHHHHHHHHHCCcEEecCCCC--CEEeeCcCCHHHHHHHHHHHHHHHH
Confidence                  1122567999999999999998655  4455689999999999999999987

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=100.00  E-value=3.1e-36  Score=276.27  Aligned_cols=271  Identities=25%  Similarity=0.394  Sum_probs=218.8

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCC--------CCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLL--------PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEA   73 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~   73 (306)
                      +.+||+++++|||.+..++..++....... .|..        ..+..++++|+++||++++++++++++|+++|+++++
T Consensus       135 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~  213 (429)
T 4e77_A          135 RDKIIKFEGCYHGHADCLLVKAGSGALTLG-QPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIVEPVAGNM  213 (429)
T ss_dssp             CCEEEEETTCCCC-------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEECSSBCTT
T ss_pred             CCEEEEEcCccCCCChhhhhhcCCcccccC-CCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEECCccCCC
Confidence            468999999999999876655543211100 0111        2346778899999999999876789999999999999


Q ss_pred             CcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC
Q 021893           74 GVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP  153 (306)
Q Consensus        74 G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~  153 (306)
                      |.+.++++++++|+++|++||++||+||+|+|| +.|..+..+.+++.+|++|+||++++|+ |+|++++++++++.+.+
T Consensus       214 g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~pdi~t~sK~~~~G~-~~G~~~~~~~~~~~l~~  291 (429)
T 4e77_A          214 NCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHVIPDLTCLGKIIGGGM-PVGAFGGRREVMNALAP  291 (429)
T ss_dssp             SCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTCCCSEEEEEGGGGTTS-CCEEEEECHHHHTTBTT
T ss_pred             CCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCCCCCeeeecccccCCC-CeEEEEECHHHHHHhcc
Confidence            999999999999999999999999999999999 8888777788899999999999999999 99999999999998876


Q ss_pred             C---CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC----
Q 021893          154 G---EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA----  226 (306)
Q Consensus       154 ~---~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~----  226 (306)
                      .   .+..+++.++++++++.++++.+.++++.++++++.+++++.|+++...++ ....+++.|+++++.+....    
T Consensus       292 ~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~  370 (429)
T 4e77_A          292 TGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEEN-IPLVVNHVGGMFGLFFTNADTVTC  370 (429)
T ss_dssp             TSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTT-CCCEEEEETTEEEEECCSSSCCCS
T ss_pred             CCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-CceEEEEeeeEEEEEEccCccccc
Confidence            3   467788999999999999999987788999999999999999999876653 56678899999999987531    


Q ss_pred             -------ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          227 -------LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       227 -------~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                             ......++++.|+++||.+.+++...+|+  +..++++++++++++|+++++
T Consensus       371 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~l~  427 (429)
T 4e77_A          371 YQDVMNCDVERFKRFFHLMLEEGVYLAPSAFEAGFM--SLAHSNEDIQKTVNAARRCFA  427 (429)
T ss_dssp             HHHHHTSCHHHHHHHHHHHHHTTEECCSSTTSCEEC--CTTCCHHHHHHHHHHHHHHHT
T ss_pred             ccccccccHHHHHHHHHHHHHCCeEEeecCCCCEEE--eccCCHHHHHHHHHHHHHHHH
Confidence                   01234789999999999999987666665  488999999999999999987

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=100.00  E-value=1.8e-36  Score=277.85  Aligned_cols=273  Identities=25%  Similarity=0.400  Sum_probs=229.3

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccC--CCCC-----CCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGF--GPLL-----PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG   74 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G   74 (306)
                      +.+||+++++|||.+..++..++........  .+..     ..+..+|++|+++||++++++++++++|+++|+++++|
T Consensus       135 ~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G  214 (429)
T 3k28_A          135 RNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEPVAGNMG  214 (429)
T ss_dssp             CCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCTTS
T ss_pred             CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCCCCCC
Confidence            4689999999999999988777643221111  1111     13567889999999999997767899999999999999


Q ss_pred             cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCC
Q 021893           75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG  154 (306)
Q Consensus        75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~  154 (306)
                      .+.++++++++|+++|++||++||+||+|+|| +.|..+..+.+++.+|+.++||++++|+ |+|++++++++++.+.+.
T Consensus       215 ~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~~G~-~iG~~~~~~~~~~~~~~~  292 (429)
T 3k28_A          215 VVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGVTPDLTCLGKVIGGGL-PVGAYGGKAEIMRQVAPS  292 (429)
T ss_dssp             CBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTCCCSEEEECGGGGTTS-CCEEEEECHHHHTTBTTT
T ss_pred             cccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCCCCceehhhhhhcCCC-CeEEEEEcHHHHhhhccC
Confidence            99999999999999999999999999999999 8887776778889999999999999999 999999999999988653


Q ss_pred             ---CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-----
Q 021893          155 ---EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----  226 (306)
Q Consensus       155 ---~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-----  226 (306)
                         .+..+++.++++++++.++++.+. +++.++++++++++++.|+++...++ .+..+++.|.++++.+....     
T Consensus       293 ~~~~~~~t~~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~  370 (429)
T 3k28_A          293 GPIYQAGTLSGNPLAMAAGYETLVQLT-PESYVEFERKAEMLEAGLRKAAEKHG-IPHHINRAGSMIGIFFTDEPVINYD  370 (429)
T ss_dssp             SSBCCCCTTTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTT-CCCEEEEETTEEEEESSSSCCCSHH
T ss_pred             CCccccCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCC-CCEEEEeeccEEEEEEecCCccccc
Confidence               366788999999999999998765 66889999999999999999876663 56678899999999875321     


Q ss_pred             -----ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          227 -----LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       227 -----~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                           ......++++.|+++||.+.|++.+.+|++  +.++++++++++++|+++++ ++
T Consensus       371 ~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~r~~--~~~t~e~i~~~l~~l~~~l~-~~  427 (429)
T 3k28_A          371 AAKSSNLQFFAAYYREMVEQGVFLPPSQFEGLFLS--TVHSDADIEATIAAAEIAMS-KL  427 (429)
T ss_dssp             HHTTSCHHHHHHHHHHHHHTTEECCSSTTSCBCCC--TTCCHHHHHHHHHHHHHHHH-TC
T ss_pred             ccccccHHHHHHHHHHHHHCCeEEecCCCCCEEEE--CCCCHHHHHHHHHHHHHHHH-HH
Confidence                 122357889999999999999877888885  78999999999999999998 65

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=100.00  E-value=2.6e-36  Score=278.38  Aligned_cols=275  Identities=25%  Similarity=0.468  Sum_probs=227.4

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCC----------C--------HHHHHHHHHhcC-CcEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG----------D--------ITALEKIFKESG-DQIA   62 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------d--------~~~le~~i~~~~-~~~~   62 (306)
                      +.+||+++++|||.+..++..++.+.++..+.|..+++..++.+          |        +++||++|++++ ++++
T Consensus       142 ~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~  221 (449)
T 3a8u_X          142 KTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIA  221 (449)
T ss_dssp             CCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEE
T ss_pred             CCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEE
Confidence            35899999999999988888777555555666655554333321          5        999999998653 4789


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-cccceee
Q 021893           63 GFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAV  141 (306)
Q Consensus        63 ~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~g~~  141 (306)
                      +|+++|+++++|.++++++++++|.++|++||++||+||+|++|++.|..+.++.+++.+|++|+||++++| + |+|++
T Consensus       222 ~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~s~sK~l~~G~~-~~G~~  300 (449)
T 3a8u_X          222 AVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLMCIAKQVTNGAI-PMGAV  300 (449)
T ss_dssp             EEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSS-CCEEE
T ss_pred             EEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEEEEcccccCCCC-ceEEE
Confidence            999999999999889999999999999999999999999999998888766667778889999999999988 7 99999


Q ss_pred             EeCHHHHhhcCCC---------CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE
Q 021893          142 LADKEVMLCIQPG---------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR  212 (306)
Q Consensus       142 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~  212 (306)
                      ++++++++.+...         .+..+++.++++++++.++++.+.++++.++++++.+++++.|+++ ..++ .+..++
T Consensus       301 ~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~~~  378 (449)
T 3a8u_X          301 IASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGI-KGAK-NVIDIR  378 (449)
T ss_dssp             EEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-TTST-TEEEEE
T ss_pred             EECHHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-hcCC-CeEEEe
Confidence            9999998887653         3456788899999999999999887788999999999999999874 2232 445567


Q ss_pred             EeeeEEEEEEecCCChh--hHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          213 GRGLFNAVEFDKTALPV--SAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       213 ~~g~~~~i~~~~~~~~~--~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +.|.++++.++......  +..++.+.|+++||.+.+++ +++|++|++.++++++++++++|+++++ ++
T Consensus       379 ~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g-~~iRis~~~~~t~~~i~~~l~~l~~~l~-~~  447 (449)
T 3a8u_X          379 NFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFGG-DTLQFGPTFNSKPQDLDRLFDAVGEVLN-KL  447 (449)
T ss_dssp             EETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEET-TEEEECCCTTCCHHHHHHHHHHHHHHHH-HC
T ss_pred             eeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEecCC-CEEEEECCCcCCHHHHHHHHHHHHHHHH-HH
Confidence            88999999987522111  33479999999999999975 8999999999999999999999999988 65

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=100.00  E-value=3e-36  Score=272.99  Aligned_cols=264  Identities=49%  Similarity=0.906  Sum_probs=236.3

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+||+...+|||.+..++.+++...+...+.|..+++..++++|+++|+++++   +++++|++++++|++|.+.+++++
T Consensus       128 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~nptG~~~~~~~~  204 (392)
T 3ruy_A          128 AEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYGDLEALKAAIT---PNTAAFILEPIQGEAGINIPPAGF  204 (392)
T ss_dssp             CEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTTCHHHHHHHCC---TTEEEEEECSSBSTTTSBCCCTTH
T ss_pred             cEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcccHHHHHHHhc---cCeEEEEEeCccCCCCCccCCHHH
Confidence            58999999999999999998887778888888888888899999999999998   579999999999999999989999


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-cccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      +++|.++|++||++||+||+|+++++.|..+..+.++..+|++++||+++|| + |+||+++++++++.+....+..+++
T Consensus       205 l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~SK~l~gG~~-~~G~~~~~~~~~~~~~~~~~~~~~~  283 (392)
T 3ruy_A          205 LKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILGKALGGGVF-PISCAAANRDILGVFEPGSHGSTFG  283 (392)
T ss_dssp             HHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTTS-CCEEEEECHHHHTTCCTTSSCCSST
T ss_pred             HHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEEEEchhhhCChh-hhEEEEECHHHHhhhccCCcCCCCC
Confidence            9999999999999999999999998888877777888899999999999999 7 9999999999999998877888899


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      .++++++++.++++.+..+++.++++++.+++++.|+++..   +.+...++.|.++++.++.     +..++.+.|.++
T Consensus       284 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~~g~~~~~~~~~-----~~~~l~~~l~~~  355 (392)
T 3ruy_A          284 GNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEIDN---PMITEVRGKGLFIGIELNE-----PARPYCEQLKAA  355 (392)
T ss_dssp             TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCCC---TTEEEEEEETTEEEEEESS-----CSHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhcC---CCceEEEeeeeEEEEEEcc-----hHHHHHHHHHHC
Confidence            99999999999999887777889999999999998887531   2455667788888888753     457899999999


Q ss_pred             CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ||.+.+++.+++|++++...+++++++++++|+++++
T Consensus       356 gi~v~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~  392 (392)
T 3ruy_A          356 GLLCKETHENVIRIAPPLVISEEDLEWAFQKIKAVLS  392 (392)
T ss_dssp             TEECCCBTTTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred             CcEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHhC
Confidence            9999999889999999999999999999999998763

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=100.00  E-value=4.5e-36  Score=278.29  Aligned_cols=267  Identities=24%  Similarity=0.407  Sum_probs=218.1

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCc-------cc------ccCC------CHHHHHHHHHhcCC---c
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH-------LK------VDFG------DITALEKIFKESGD---Q   60 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~-------~~------~~~~------d~~~le~~i~~~~~---~   60 (306)
                      .+||+++++|||.+.+++++++.........|. +++       ..      ++++      |+++|+++|+++++   +
T Consensus       180 ~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~  258 (472)
T 1ohv_A          180 YSILSFMGAFHGRTMGCLATTHSKAIHKIDIPS-FDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKT  258 (472)
T ss_dssp             CEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCC-CCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CeEEEECCCcccccHHHHhcCCCccccccCCCC-CCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCC
Confidence            799999999999999999888854332211121 111       11      1122      68999999986422   7


Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCC--CcEEEeccc-ccCCccc
Q 021893           61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR--PDMVILGKA-LGGGVIP  137 (306)
Q Consensus        61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~--~d~~s~sK~-~~~G~~~  137 (306)
                      +++|++||+++++|.+++++++|++|+++|++||++||+||+|+||++.|..+.++.+++.  +|+.+|||+ ++||+  
T Consensus       259 ~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~sK~~l~GG~--  336 (472)
T 1ohv_A          259 VAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTGGF--  336 (472)
T ss_dssp             EEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEECGGGSSEEE--
T ss_pred             EEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEccccccCCc--
Confidence            9999999999999999999999999999999999999999999999999887777888876  999999999 78777  


Q ss_pred             ceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893          138 VSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF  217 (306)
Q Consensus       138 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~  217 (306)
                         ++ ++++ ..+....+..++++|+++++++.++++.+.++++.+++++++++++++|+++...++..+..+++.|.+
T Consensus       337 ---~~-~~~~-~~~~~~~~~~T~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g~~  411 (472)
T 1ohv_A          337 ---FH-KEEF-RPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTF  411 (472)
T ss_dssp             ---EE-CGGG-SCSSSSSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTE
T ss_pred             ---cC-chhh-cccccccccCccCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCceE
Confidence               44 6665 334455677888899999999999999988778899999999999999999865553235567788999


Q ss_pred             EEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          218 NAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       218 ~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +++++..   ......+++.|+++||.+.|.+.++||++|++.+++++|++++++|+++++ ++
T Consensus       412 ~~~~~~~---~~~~~~~~~~l~~~Gv~~~~~g~~~iRi~~~~~~t~e~i~~~~~~l~~~l~-~~  471 (472)
T 1ohv_A          412 CSFDTPD---ESIRNKLISIARNKGVMLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSDILA-DF  471 (472)
T ss_dssp             EEEECSS---HHHHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHH-TC
T ss_pred             EEEEeCC---hhHHHHHHHHHHHCCeEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-hc
Confidence            9987653   345678999999999999997778999999999999999999999999988 54

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=100.00  E-value=7.6e-36  Score=271.30  Aligned_cols=274  Identities=32%  Similarity=0.538  Sum_probs=241.7

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+||+.+.+|||....+...++...+...+.|...++..+|++|+++|+++++   +++++|+++|+++.+|.+.++.+.
T Consensus       129 ~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~p~np~g~~~~~~~~~  205 (406)
T 4adb_A          129 SGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALID---DSTCAVIVEPIQGEGGVVPASNAF  205 (406)
T ss_dssp             CEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCHHHHHTTCS---TTEEEEEECSEETTTTSEECCHHH
T ss_pred             cEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcHHHHHHHhc---CCeEEEEEeCCcCCCCCccCCHHH
Confidence            68999999999999999988887777777778778888999999999999987   579999999877777766678999


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCC
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGG  162 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~  162 (306)
                      +++|.++|++||++||+||+|+|+++.|..+..+.++..+|++++||.+++|+ |+||+++++++++.+....+..+++.
T Consensus       206 l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~t~sK~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~  284 (406)
T 4adb_A          206 LQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLLTTAKALGGGF-PVGALLATEECARVMTVGTHGTTYGG  284 (406)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTS-CCEEEEECHHHHHTCCTTSSCCSSTT
T ss_pred             HHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEEEechhhcCCC-CeEEEEEcHHHHhhhccCCcCCCCCC
Confidence            99999999999999999999999988888776777788899999999999998 99999999999999988778888999


Q ss_pred             CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCC
Q 021893          163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG  242 (306)
Q Consensus       163 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~G  242 (306)
                      ++++++++.++++.+..+++.++++++++++++.|+++...+ ......++.|.++++.++... .....++++.|+++|
T Consensus       285 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~g  362 (406)
T 4adb_A          285 NPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRY-GLFSEVRGLGLLIGCVLNADY-AGQAKQISQEAAKAG  362 (406)
T ss_dssp             CHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHH-CCEEEEEEETTEEEEEECTTT-TTCHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEEEEEEEEEEEeCCc-HHHHHHHHHHHHHCC
Confidence            999999999999988777789999999999999999987654 255667788999999887521 125788999999999


Q ss_pred             ceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          243 ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       243 i~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      |.+.+++.+++|++++..++++++++++++|+++++ ++.+
T Consensus       363 i~v~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~-~~~~  402 (406)
T 4adb_A          363 VMVLIAGGNVVRFAPALNVSEEEVTTGLDRFAAACE-HFVS  402 (406)
T ss_dssp             EECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHHH-HHHC
T ss_pred             cEEeecCCCeEEEECCCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence            999998889999999999999999999999999998 7643

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=100.00  E-value=1.4e-35  Score=271.86  Aligned_cols=273  Identities=32%  Similarity=0.523  Sum_probs=224.4

Q ss_pred             cceEEEEecCCCCcccchhcccCCcc-ccccCCCCCCCccccc-----------CCCHHHHHHHHHhcCCcEEEEEEccc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNE-AIRGFGPLLPGHLKVD-----------FGDITALEKIFKESGDQIAGFLFEPI   69 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~~d~~~le~~i~~~~~~~~~v~v~~~   69 (306)
                      +.+||++.++|||.+..++.+++... +...+.+..+++..++           +.|+++|+++++++++++++|+++|+
T Consensus       134 ~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~  213 (429)
T 1s0a_A          134 RQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPI  213 (429)
T ss_dssp             CCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECSS
T ss_pred             CCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEeec
Confidence            46899999999999888777766432 3344444444432222           25799999999875567999999999


Q ss_pred             -cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-cccceeeEeCHHH
Q 021893           70 -QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-VIPVSAVLADKEV  147 (306)
Q Consensus        70 -~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~~~~g~~~~~~~~  147 (306)
                       +|++|.++++++++++|.++|++||++||+||+|+||++.|..+.++.+++.+|++++||++++| + |+||+++++++
T Consensus       214 ~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~t~sK~l~~G~~-~iG~~~~~~~~  292 (429)
T 1s0a_A          214 VQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTM-TLSATLTTREV  292 (429)
T ss_dssp             EECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTSSS-CCEEEEECHHH
T ss_pred             ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEEEecccccCCCc-cceEEEeCHHH
Confidence             99999889999999999999999999999999999998888766667778889999999999999 8 99999999999


Q ss_pred             HhhcCCC-----CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE
Q 021893          148 MLCIQPG-----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF  222 (306)
Q Consensus       148 ~~~~~~~-----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~  222 (306)
                      ++.+...     .+..+++.|+++++++.++++.+.++++.+++++++++++++|+++.. ++ .+..+++.|.++++.+
T Consensus       293 ~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-~~-~~~~~~~~g~~~~~~~  370 (429)
T 1s0a_A          293 AETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARD-AE-MVADVRVLGAIGVVET  370 (429)
T ss_dssp             HHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGG-CT-TEEEEEEETTEEEEEE
T ss_pred             HHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhc-CC-CEEEEEEeeEEEEEEE
Confidence            8887653     245678889999999999999888777889999999999999987632 33 3445677788889887


Q ss_pred             ecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          223 DKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       223 ~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +.   ..+..++.+.|+++||.+.+. .+++|++++..++++++++++++|+++++ ++.
T Consensus       371 ~~---~~~~~~l~~~l~~~Gi~v~~~-~~~iRis~~~~~t~e~i~~~~~~l~~~~~-~~~  425 (429)
T 1s0a_A          371 TH---PVNMAALQKFFVEQGVWIRPF-GKLIYLMPPYIILPQQLQRLTAAVNRAVQ-DET  425 (429)
T ss_dssp             SS---CBCHHHHHHHHHHTTEECCCB-TTEEEECCCTTCCHHHHHHHHHHHHHHTS-SGG
T ss_pred             CC---cccHHHHHHHHHHCCCEEecc-CCEEEEECCCCCCHHHHHHHHHHHHHHHH-hhh
Confidence            64   235678999999999999986 47999999999999999999999999887 543

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=100.00  E-value=1.8e-35  Score=270.47  Aligned_cols=264  Identities=36%  Similarity=0.661  Sum_probs=214.4

Q ss_pred             cceEEEEecCCCCcccchhcccCCc-cccccCCCCCCCcccccCC---------------------CHHHHH-HHHHhcC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFG---------------------DITALE-KIFKESG   58 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------------------d~~~le-~~i~~~~   58 (306)
                      +.+||++..+|||.+..++.+++.. .++..+.|...++..+|++                     |+++|+ ++++++.
T Consensus       129 ~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~  208 (419)
T 2eo5_A          129 RKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLV  208 (419)
T ss_dssp             CCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTC
T ss_pred             CCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhcc
Confidence            4689999999999999888887754 4444555555555555554                     367888 8887532


Q ss_pred             --CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC-c
Q 021893           59 --DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG-V  135 (306)
Q Consensus        59 --~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G-~  135 (306)
                        +++++|+++|+++++|.++++++++++|.++|++||++||+||+|++|++.|..+.++.++..+|++|+||++++| +
T Consensus       209 ~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G~~  288 (419)
T 2eo5_A          209 PPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVITLAKALGGGIM  288 (419)
T ss_dssp             CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTTS
T ss_pred             CCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEEEecccccCCcc
Confidence              4689999999988899888999999999999999999999999999998888766667778889999999999999 8


Q ss_pred             ccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893          136 IPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG  215 (306)
Q Consensus       136 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g  215 (306)
                       |+||++++++++ .+ ...+..+++.|+++++++.++++.+.+  +.++++++++++++.|+++   .    ..+++.|
T Consensus       289 -riG~~~~~~~~~-~~-~~~~~~t~~~n~~~~~aa~aal~~~~~--~~~~~~~~~~~l~~~L~~~---~----~~~~~~g  356 (419)
T 2eo5_A          289 -PIGATIFRKDLD-FK-PGMHSNTFGGNALACAIGSKVIDIVKD--LLPHVNEIGKIFAEELQGL---A----DDVRGIG  356 (419)
T ss_dssp             -CCEEEEEEGGGC-CC-------CCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHTTS---S----SEEEEET
T ss_pred             -ceEEEEEchHhh-cC-CcccCCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHh---h----hheEeee
Confidence             999999999988 77 445667888999999999999987654  7788888888888888664   1    2557789


Q ss_pred             eEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          216 LFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       216 ~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +++++.+.+.  ..... +++.|+++||.+.+++.+++|+++++..+++++++++++|+++++ ++
T Consensus       357 ~~~~i~~~~~--~~~~~-~~~~l~~~Gv~v~~~~~~~lRis~~~~~t~e~i~~~l~~l~~~l~-~~  418 (419)
T 2eo5_A          357 LAWGLEYNEK--KVRDR-IIGESFKRGLLLLPAGRSAIRVIPPLVISEEEAKQGLDILKKVIK-VV  418 (419)
T ss_dssp             TEEEEECSCH--HHHHH-HHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHH-HC
T ss_pred             EEEEEEEecC--ccHHH-HHHHHHHCCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-hc
Confidence            9998887320  12355 999999999999998778999999999999999999999999987 54

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=100.00  E-value=5.4e-35  Score=268.42  Aligned_cols=274  Identities=26%  Similarity=0.402  Sum_probs=221.8

Q ss_pred             cceEEEEecCCCCcccchhcccCCcccc--ccCCCCC-----CCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAI--RGFGPLL-----PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG   74 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G   74 (306)
                      +.+||+++++|||.+..++..++.....  .+..+..     ..+..++++|++.||++++++++++++|+++|+++++|
T Consensus       138 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G  217 (434)
T 2epj_A          138 RDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPYNDVEALERVFAEYGDRIAGVIVEPVIANAG  217 (434)
T ss_dssp             CCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCSSS
T ss_pred             CCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCCCCHHHHHHHHHhCCCCEEEEEEeCCcCCCC
Confidence            4689999999999998887666532111  0111111     13466788999999999986545799999999999999


Q ss_pred             cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCC
Q 021893           75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG  154 (306)
Q Consensus        75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~  154 (306)
                      .+.++++++++|+++|++||++||+||+|+|| +.|..+..+.+++.+|++|+||++++|+ |+|++++++++++.+...
T Consensus       218 ~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~~G~-~~G~v~~~~~~~~~l~~~  295 (434)
T 2epj_A          218 VIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNIEGDIIVLGKIIGGGF-PVGAVAGSREVMSLLTPQ  295 (434)
T ss_dssp             CBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTCCCSEEEEEGGGGTTS-SCEEEEECHHHHTTBTTT
T ss_pred             ccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCCCCCeeeecchhcCCc-ceeeeeecHHHHHhhccC
Confidence            88889999999999999999999999999998 6676565677788999999999999998 999999999999988762


Q ss_pred             ---CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC-----
Q 021893          155 ---EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA-----  226 (306)
Q Consensus       155 ---~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~-----  226 (306)
                         .+..+|..|+++++++.++++.+.++++.++++++++++++.|+++...++ ....+++.|.++++.++...     
T Consensus       296 ~~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~  374 (434)
T 2epj_A          296 GKVFNAGTFNAHPITMAAGLATLKALEEEPVYSVSREAAKALEEAASEVLDRTG-LPYTINRVESMMQLFIGVEEVSNAA  374 (434)
T ss_dssp             SSBCCCCTTTTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEETTEEEEEETCSCCSSHH
T ss_pred             CCcccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEEeeeEEEEEEeCCCcccch
Confidence               356788899999999999999987778999999999999999998754432 44457788999999886411     


Q ss_pred             -----ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          227 -----LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       227 -----~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                           ......++++.|+++||.+.+++...+|+  ++.++++++++++++|+++++ ++
T Consensus       375 ~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~l~-~~  431 (434)
T 2epj_A          375 QARKADKKFYVKLHEEMLRRGVFIAPSNLEAVFT--GLPHQGEALEIAVEGLRSSLK-TV  431 (434)
T ss_dssp             HHTTSCHHHHHHHHHHHHHTTEECCSSTTSCEEC--CTTCSHHHHHHHHHHHHHHHH-HH
T ss_pred             hccccCHHHHHHHHHHHHHCCeEEeccCCCcEEE--eccCCHHHHHHHHHHHHHHHH-HH
Confidence                 02346789999999999999986555554  588999999999999999988 64

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=100.00  E-value=2.4e-34  Score=263.13  Aligned_cols=277  Identities=27%  Similarity=0.559  Sum_probs=227.1

Q ss_pred             ceEEEEecCCCCcccchhcccCCc-cccccCCCCCCCcccccCC----------CHHHHHHHHHh--cCCcEEEEEEccc
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFG----------DITALEKIFKE--SGDQIAGFLFEPI   69 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------d~~~le~~i~~--~~~~~~~v~v~~~   69 (306)
                      .+||+++.+|||.+..++..++.. .++..+.|...++..+|.+          |+++|++++++  +++++++|+++|+
T Consensus       129 ~~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~  208 (426)
T 1sff_A          129 SGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPV  208 (426)
T ss_dssp             CEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSB
T ss_pred             CeEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEecc
Confidence            479999999999987666655522 2334455554455444442          68999999975  1247899999998


Q ss_pred             cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHh
Q 021893           70 QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVML  149 (306)
Q Consensus        70 ~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~  149 (306)
                      ++++|.++++++++++|.++|++||++||+||+|+||++.|..+.++.++..+|+.|+||.+++|+ |+||+++++++++
T Consensus       209 ~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~s~sK~~~~Gl-riG~~~~~~~~~~  287 (426)
T 1sff_A          209 QGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGF-PLAGVTGRAEVMD  287 (426)
T ss_dssp             CTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGGTSS-CCEEEEEEHHHHT
T ss_pred             cCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCCCCCEEEEcccccCCC-ceEEEEEcHHHHh
Confidence            777888899999999999999999999999999999988887666677788899999999999998 9999999999999


Q ss_pred             hcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecC----
Q 021893          150 CIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT----  225 (306)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~----  225 (306)
                      .+....+..+++.++++++++.++++.+.++++.+++++++++++++|+++...++ .+...++.|.++++.+...    
T Consensus       288 ~l~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~  366 (426)
T 1sff_A          288 AVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHP-EIGDVRGLGAMIAIELFEDGDHN  366 (426)
T ss_dssp             TSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTCT-TEEEEEEETTEEEEEEBGGGCTT
T ss_pred             hhccCCcCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEEEEEEEEEEecCcccc
Confidence            88766667788889999999999999888777899999999999999998765553 4445566799999988531    


Q ss_pred             -CChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          226 -ALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       226 -~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                       +......++++.|+++||.+.++.  .+++|++++..++++++++++++|+++++ ++.
T Consensus       367 ~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~-~~~  425 (426)
T 1sff_A          367 KPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCFD-EAK  425 (426)
T ss_dssp             SBCHHHHHHHHHHHHHTTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHHH-HHC
T ss_pred             CCChHHHHHHHHHHHHCCcEEecCCCCCCEEEEECCccCCHHHHHHHHHHHHHHHH-HHh
Confidence             013457789999999999999875  68999999889999999999999999988 653

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=100.00  E-value=7.5e-35  Score=264.25  Aligned_cols=267  Identities=32%  Similarity=0.652  Sum_probs=226.1

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+||+++++|||.+..++...+......++.|...++..+|++|+++|+++++   +++++|++++++|++|.++++.+.
T Consensus       129 ~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~nptG~~~~~~~~  205 (397)
T 2ord_A          129 YRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFNNVEDLRRKMS---EDVCAVFLEPIQGESGIVPATKEF  205 (397)
T ss_dssp             CEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTTCHHHHHHHCC---TTEEEEEECSEECTTTCEECCHHH
T ss_pred             ceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecCCCHHHHHHHhh---cCeEEEEEecccCCCCcccCCHHH
Confidence            57999999999998866666554444455667777788888999999999997   479999999999999986788999


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCC
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGG  162 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~  162 (306)
                      +++|.++|++||++||+||+|+|+++.|..+....++..+|++|+||.+++|+ |+|+++++++++ .+....+..+++.
T Consensus       206 l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~-r~G~~~~~~~~~-~l~~~~~~~~~~~  283 (397)
T 2ord_A          206 LEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVLTTAKGLGGGV-PIGAVIVNERAN-VLEPGDHGTTFGG  283 (397)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTS-CCEEEEECSTTC-CCCTTSSCCSSTT
T ss_pred             HHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCeeeeccccCCCc-CeEEEEEchHhc-ccCCCCcCCCCCC
Confidence            99999999999999999999999887776554555666789999999999999 999999998887 7765556677888


Q ss_pred             CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCC
Q 021893          163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG  242 (306)
Q Consensus       163 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~G  242 (306)
                      ++++++++.++++.+.++++.++++++++++++.|+++...++ .+...++.|.++++.++.   ..+..++++.|+++|
T Consensus       284 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~~~~~~---~~~~~~l~~~l~~~g  359 (397)
T 2ord_A          284 NPLACRAGVTVIKELTKEGFLEEVEEKGNYLMKKLQEMKEEYD-VVADVRGMGLMIGIQFRE---EVSNREVATKCFENK  359 (397)
T ss_dssp             CHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHCT-TEEEEEEETTEEEEEECT---TSCHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCC-ceEEEEEEeEEEEEEECC---hHHHHHHHHHHHHCC
Confidence            9999999999999887777899999999999999998753443 344456778888988864   235778999999999


Q ss_pred             ceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          243 ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       243 i~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      |.+.+++++++|++++...+++++++++++|+++++
T Consensus       360 i~v~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~  395 (397)
T 2ord_A          360 LLVVPAGNNTIRFLPPLTVEYGEIDLAVETLKKVLQ  395 (397)
T ss_dssp             EECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred             CEEccCCCCEEEEECCcCCCHHHHHHHHHHHHHHHh
Confidence            999998788999999989999999999999999887

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=100.00  E-value=3.7e-34  Score=262.06  Aligned_cols=270  Identities=27%  Similarity=0.435  Sum_probs=218.8

Q ss_pred             cceEEEEecCCCCcccchhcccCCcccc--ccCCCCC-----CCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAI--RGFGPLL-----PGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAG   74 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G   74 (306)
                      +.+||+++++|||.+..++..++.....  .+..+..     ..+..+|++|+++||++++++++++++|+++|+++++|
T Consensus       134 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G  213 (424)
T 2e7u_A          134 RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEYNDPEGLREVLKRRGEEIAAIIFEPVVGNAG  213 (424)
T ss_dssp             CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTS
T ss_pred             CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCCCCHHHHHHHHHhCCCCEEEEEEeCCCCCCC
Confidence            4689999999999988877665431110  0111111     23466788999999999986545799999999999999


Q ss_pred             cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCC
Q 021893           75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPG  154 (306)
Q Consensus        75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~  154 (306)
                      .++++++++++|+++ ++||++||+||+|+|| +.|..+..+.+++.+|++|+||++++|+ |+|++++++++++.+.+.
T Consensus       214 ~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~~G~-~~G~~~~~~~~~~~~~~~  290 (424)
T 2e7u_A          214 VLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGLKPDLVTLGKILGGGL-PAAAYAGRREIMEKVAPL  290 (424)
T ss_dssp             CBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTCCCSEEEECGGGGTTS-SCEEEEECHHHHTTBTTT
T ss_pred             CcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCCCcchhhhhhhhhCCc-ceEEEEEcHHHHhhhccc
Confidence            888999999999999 9999999999999998 6676665667788999999999999998 999999999999988762


Q ss_pred             ---CccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC----
Q 021893          155 ---EHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA----  226 (306)
Q Consensus       155 ---~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~----  226 (306)
                         .+..+++.|+++++++.++++.+.+ +++.+++++++++++++|+++...++ ....+++.|.++++.+....    
T Consensus       291 ~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~i~~~~~~~~~~  369 (424)
T 2e7u_A          291 GPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKG-LPHTVNRVGSMITVFFTEGPVVTF  369 (424)
T ss_dssp             SSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHTT-CCCEEEEETTEEEEESSSSCCCSH
T ss_pred             CCcccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCC-CceEEEeeceEEEEEEeCCCCcch
Confidence               3566888999999999999999877 77899999999999999998865543 44457788999999886411    


Q ss_pred             ------ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          227 ------LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       227 ------~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                            ......++++.|+++||.+.+++...+|+  +..++++++++++++|++++
T Consensus       370 ~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~--~~~~t~~~i~~~l~~l~~~l  424 (424)
T 2e7u_A          370 QDARRTDTELFKRFFHGLLDRGIYWPPSNFEAAFL--SVAHREEDVEKTLEALRKAL  424 (424)
T ss_dssp             HHHTTSCHHHHHHHHHHHHTTTEECCSSSSSCEEC--CTTCCHHHHHHHHHHHHHHC
T ss_pred             hhhcccCHHHHHHHHHHHHHCCeEEeccCCCceEe--eccCCHHHHHHHHHHHHHhC
Confidence                  12346689999999999999976555554  58899999999999998764

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=100.00  E-value=5.8e-34  Score=262.97  Aligned_cols=273  Identities=23%  Similarity=0.304  Sum_probs=204.6

Q ss_pred             cceEEEEecCCCCcccchhcccCCcc---ccccCC-CCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCccc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNE---AIRGFG-PLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVII   77 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~   77 (306)
                      +.+||+++++|||.+..++..++...   ...+.. +....+..++++|+++||++++++++++++|+++|+++++|.++
T Consensus       139 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~tG~~~  218 (453)
T 2cy8_A          139 RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRPDDIEGMREVFANHGSDIAAFIAEPVGSHFGVTP  218 (453)
T ss_dssp             CCEEEEECC----------------------------CGGGEEEECTTCHHHHHHHHHHHGGGEEEEEECSSEHHHHTEE
T ss_pred             CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCCCCHHHHHHHHHhcCCCEEEEEECCCCCCCCCcC
Confidence            46899999999999887766543200   000110 01123566788999999999986545799999999988899888


Q ss_pred             CChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC----
Q 021893           78 PPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP----  153 (306)
Q Consensus        78 ~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~----  153 (306)
                      ++++++++|+++|++||++||+||+|+|+ +.|..+.++.+++.+|++|+||++++|+ |+|++++++++++.+..    
T Consensus       219 ~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~~G~-~~G~v~~~~~~~~~l~~~~~~  296 (453)
T 2cy8_A          219 VSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDVQPDLTCLAKASAGGL-PGGILGGREDVMGVLSRGSDR  296 (453)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTCCCSEEEEEGGGGTTS-SCEEEEECHHHHTTSSSCC--
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCCCCcEEEEChhhhCCc-ceEEEechHHHHHHhccccCC
Confidence            89999999999999999999999999998 7776665667788899999999999999 99999999999998876    


Q ss_pred             -CCccCCCCCCHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec-----CC
Q 021893          154 -GEHGSTFGGNPLASAVAIASLDV-IRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK-----TA  226 (306)
Q Consensus       154 -~~~~~~~~~~~~~~~aa~~al~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~-----~~  226 (306)
                       ..+..+++.|+++++++.++++. + .+++.++++++++++++.|+++...++ ....+++.|.++++.++.     ..
T Consensus       297 ~~~~~~t~~~n~~~~aa~~aal~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~g~~~~i~~~~~~~~~~~  374 (453)
T 2cy8_A          297 KVLHQGTFTGNPITAAAAIAAIDTIL-EDDVCAKINDLGQFAREAMNHLFARKG-LNWLAYGRFSGFHLMPGLPPNTTDT  374 (453)
T ss_dssp             -------CCCCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECCTTEEEEEETSCTTCCCC
T ss_pred             CceeCCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEEeeeEEEEEEecccccccc
Confidence             13556788999999999999998 7 677899999999999999998865543 444577889999998863     10


Q ss_pred             -----------ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          227 -----------LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       227 -----------~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                                 ......++++.|+++||.+.|.  +.+|+  +..++++++++++++|+++++ ++.+
T Consensus       375 ~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~~~--~~~~l--~~~~t~~~i~~~l~~l~~~l~-~~~~  437 (453)
T 2cy8_A          375 GSITRAEVARPDVKMIAAMRMALILEGVDIGGR--GSVFL--SAQHEREHVEHLVTTFDRVLD-RLAD  437 (453)
T ss_dssp             HHHHTTCSCCCCHHHHHHHHHHHHHTTEECBTT--TEEEC--CTTCCHHHHHHHHHHHHHHHH-HHHH
T ss_pred             ccccccccccccHHHHHHHHHHHHHCCeEEeCC--CCEEe--eccCCHHHHHHHHHHHHHHHH-HHHh
Confidence                       1233678999999999999764  34554  588999999999999999998 7754

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=100.00  E-value=2.2e-37  Score=284.72  Aligned_cols=265  Identities=22%  Similarity=0.308  Sum_probs=222.5

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+||+|+++|||.+.+++  +++  ...+.   .+.+..+||+|+++|+++++++++++++|++||+++++|.++++++
T Consensus       182 r~~ii~~~~~yHG~~~~~~--sg~--~~~g~---~~~~~~~~~~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~  254 (465)
T 2yky_A          182 RKTVLAFDGGYHGGLLNFA--SGH--APTNA---PYHVVLGVYNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERA  254 (465)
Confidence            4789999999999998877  331  11111   1145778899999999999876568999999999988998999999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC-----CCc
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP-----GEH  156 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~-----~~~  156 (306)
                      ++++|+++|++||++||+||+|+ + +.|..+.++.+++.||++|+||++++|+ |+||+++++++++.+.+     ..+
T Consensus       255 ~l~~l~~l~~~~g~llI~DEv~~-~-r~g~~~a~~~~gv~pDi~t~sK~lg~G~-piG~v~~~~~i~~~l~~~~~g~~~~  331 (465)
T 2yky_A          255 FLDLLRAEASRCGALLIFDEVMT-S-RLSGGGAQEMLGISADLTTLGKYIGGGM-SFGAFGGRRDLMERFDPARDGAFAH  331 (465)
Confidence            99999999999999999999999 6 7787777888899999999999999999 99999999999998876     246


Q ss_pred             cCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC----------
Q 021893          157 GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA----------  226 (306)
Q Consensus       157 ~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~----------  226 (306)
                      ..++++|+++++++.++++.+.++++.+++++++++++++|+++...++ .+..+++.|+++++.+.+.+          
T Consensus       332 ~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~  410 (465)
T 2yky_A          332 AGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRANLNRIAVENQ-APLQFTGLGSLGTIHFSRAPIRSAGDVRAA  410 (465)
Confidence            7888999999999999999998888999999999999999999865552 55678899999999876411          


Q ss_pred             ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          227 LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       227 ~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      .......+++.|+++||++.|.+.+.    |++.++++||++++++|+++++ ++.
T Consensus       411 d~~~~~~~~~~ll~~GV~v~p~~~~~----~s~~~t~edid~~l~~l~~~l~-~~~  461 (465)
T 2yky_A          411 DQQLKELFFFHMLRKGIYLAPRGMYA----LSLEIADAGRDAFAEALADFIG-EQR  461 (465)
Confidence            01125578999999999999875332    6688999999999999999988 653

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=100.00  E-value=2.1e-33  Score=254.55  Aligned_cols=265  Identities=33%  Similarity=0.574  Sum_probs=219.4

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+||++..+|||.+..+....+.......+.|...++..++++|+++|+++++   +++++|+++|+++++|.+.++++
T Consensus       130 ~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~~~tG~~~~~~~  206 (395)
T 1vef_A          130 RKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVD---EETAAVILEPVQGEGGVRPATPE  206 (395)
T ss_dssp             CCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCC---TTEEEEEECSEETTTTSEECCHH
T ss_pred             CCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhc---cCEEEEEEeCccCCCCccCCCHH
Confidence            467999999999998776666554333334455555666777889999999997   47999999999999998888999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      ++++|.++|++||++||+||+|+|+++.|..+..+..+..+|++|+||.+++|+ |+|++++++++++.+....+..+++
T Consensus       207 ~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~s~sK~~~~g~-~~G~~~~~~~~~~~l~~~~~~~~~~  285 (395)
T 1vef_A          207 FLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDILTLAKALGGGV-PLGVAVMREEVARSMPKGGHGTTFG  285 (395)
T ss_dssp             HHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTS-SCEEEEEEHHHHHTSCTTSSCCSST
T ss_pred             HHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEEEEcccccCCC-ceEEEEehHHHHhhhccCCcCCCcC
Confidence            999999999999999999999998877776555566677889999999999998 9999999999988887655666778


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-H
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-E  240 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~  240 (306)
                      .++++++++.++++.+..+++.++++++++++++.|+++..   +.+...++.|.++++.++.     ...++++.|+ +
T Consensus       286 ~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~g~~~~~~~~~-----~~~~l~~~l~~~  357 (395)
T 1vef_A          286 GNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIPS---PKIREVRGMGLMVGLELKE-----KAAPYIARLEKE  357 (395)
T ss_dssp             TCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSCC---TTEEEEEEETTEEEEEESS-----CSHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc---CceEEEEEEEEEEEEEEcC-----hHHHHHHHHHHH
Confidence            89999999999999887666788899999999988877532   1233456778888988763     2567899999 9


Q ss_pred             CCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       241 ~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +||.+.+++.+++|++++..++++++++++++|+++++
T Consensus       358 ~gi~v~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~  395 (395)
T 1vef_A          358 HRVLALQAGPTVIRFLPPLVIEKEDLERVVEAVRAVLA  395 (395)
T ss_dssp             HCEECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred             CCeEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHhC
Confidence            99999998789999999889999999999999998763

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=100.00  E-value=1.3e-32  Score=247.52  Aligned_cols=258  Identities=34%  Similarity=0.659  Sum_probs=214.8

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+|++.+.+||+....+....+.......+.|..+++..++++|+++|+++++   +++++|+++|+++++|.+.+++++
T Consensus       118 ~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~~~tG~~~~~~~~  194 (375)
T 2eh6_A          118 WKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLNDIDSVYKLLD---EETAGIIIEVIQGEGGVNEASEDF  194 (375)
T ss_dssp             CEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECTTCHHHHHTTCC---TTEEEEEECSEETTTTSEECCHHH
T ss_pred             CEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCCchHHHHHHHhc---CCeEEEEEeCccCCCCCcCCCHHH
Confidence            68999999999988877766654333334556656677788889999999887   479999999999999988889999


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCC
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGG  162 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~  162 (306)
                      +++|.++|++||+++|+||+|+++++.+..+..+.++..+|++++||.+++|+ |+|++++++++++.+.......++..
T Consensus       195 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~s~SK~~~~g~-~~G~~~~~~~~~~~~~~~~~~~~~~~  273 (375)
T 2eh6_A          195 LSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALAKGLGGGV-PIGAILAREEVAQSFTPGSHGSTFGG  273 (375)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTS-CCEEEEEEHHHHTTCCTTSCCCSSTT
T ss_pred             HHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEEEEcccccCCC-CeEEEEEcHHHHhhhcCCCCCCCCCC
Confidence            99999999999999999999999877775555566666789999999999998 99999999999888877556667778


Q ss_pred             CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCC
Q 021893          163 NPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG  242 (306)
Q Consensus       163 ~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~G  242 (306)
                      +++.++++.++++.+.  ++.++++++++++++.|+++.     . ...++.|.++++.++.     +..++++.|+++|
T Consensus       274 ~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~~-----~-~~~~~~g~~~~~~~~~-----~~~~~~~~l~~~g  340 (375)
T 2eh6_A          274 NPLACRAGTVVVDEVE--KLLPHVREVGNYFKEKLKELG-----K-GKVKGRGLMLGLELER-----ECKDYVLKALEKG  340 (375)
T ss_dssp             CHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHTT-----S-SEEEEETTEEEEECSS-----CCHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHh-----c-CCceEEEEEEEEEEcC-----cHHHHHHHHHHCC
Confidence            8999988888888775  577888888888888887752     1 2456778888887763     2567899999999


Q ss_pred             ceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          243 ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       243 i~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      |.+.+++.+++|++++...+++++++++++|++++
T Consensus       341 i~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l  375 (375)
T 2eh6_A          341 LLINCTAGKVLRFLPPLIIQKEHIDRAISVLREIL  375 (375)
T ss_dssp             EECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHC
T ss_pred             CEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence            99998778899999998999999999999998763

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=99.95  E-value=2.5e-27  Score=216.56  Aligned_cols=258  Identities=13%  Similarity=0.116  Sum_probs=183.7

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+||+...+||+....+..........    |..+....+ ..|+++||+++++  +++++|++++++|++| ++++++.
T Consensus       144 d~Vi~~~~~y~~~~~~~~~~g~~~~~~----~~~~~~~~~-~~d~~~le~~i~~--~~~~~vil~~p~nptG-~~~~~~~  215 (421)
T 3l8a_A          144 DAVLINSPVYYPFARTIRLNDHRLVEN----SLQIINGRF-EIDFEQLEKDIID--NNVKIYLLCSPHNPGG-RVWDNDD  215 (421)
T ss_dssp             EEEEEEESCCHHHHHHHHHTTEEEEEE----ECEEETTEE-ECCHHHHHHHHHH--TTEEEEEEESSBTTTT-BCCCHHH
T ss_pred             CEEEECCCCcHHHHHHHHHCCCEEEec----cccccCCCe-eeCHHHHHHHhhc--cCCeEEEECCCCCCCC-CcCCHHH
Confidence            578999999998665544433211000    110000000 1389999999985  4799999999999999 5678889


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhccccccccc-ccc-----cCCCCCcEEEeccccc-CCcccceeeEeC-HHHHhhcCCC
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRML-ASD-----WEEVRPDMVILGKALG-GGVIPVSAVLAD-KEVMLCIQPG  154 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~-----~~~~~~d~~s~sK~~~-~G~~~~g~~~~~-~~~~~~~~~~  154 (306)
                      |++|+++|++||++||+||+|+++++.|..+ .+.     ..+..+++.|+||+++ +|+ |+|+++++ +++++.+...
T Consensus       216 l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~-~~G~~~~~~~~l~~~~~~~  294 (421)
T 3l8a_A          216 LIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGT-KNSFAIIQNESLRRKFQYR  294 (421)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGG-CCEEEECCSHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchh-heEeEEcCCHHHHHHHHHH
Confidence            9999999999999999999999987777422 111     1234456789999998 899 99999998 8888877654


Q ss_pred             C-ccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE-eeeEEEEEEecCCChhh
Q 021893          155 E-HGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFDKTALPVS  230 (306)
Q Consensus       155 ~-~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~  230 (306)
                      . ....++.++++++++.++++...+  ++..++++++.+++++.|++.    + .+...++ .+.+.|+.++..  ..+
T Consensus       295 ~~~~~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~-~i~~~~~~~~~~~~v~~~~~--~~~  367 (421)
T 3l8a_A          295 QLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAK----T-KIKVMEPEGTYLVWLDFSAY--AIA  367 (421)
T ss_dssp             HHHTTCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH----C-SCEEECCSBSSEEEEECGGG--TCC
T ss_pred             HHhcccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhC----C-CceEeCCCeeEEEEEecccc--CCC
Confidence            3 334457899999999998875322  345666777777777777765    2 2223344 444456777641  134


Q ss_pred             HHHHHHHHHHC-CceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          231 AYDICLKMKER-GILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       231 ~~~~~~~l~~~-Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ..++.+.|+++ ||.+.++      +.+++|++++  +++++|++++++|+++++
T Consensus       368 ~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l~  420 (421)
T 3l8a_A          368 QPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA--TPKNTVQEALSRIISVFG  420 (421)
T ss_dssp             TTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHh
Confidence            56889999855 9999873      3689999966  689999999999998875

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=99.94  E-value=3.2e-26  Score=209.62  Aligned_cols=231  Identities=14%  Similarity=0.116  Sum_probs=180.3

Q ss_pred             cccccCCCHHHHHHHHHhcCC-cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcc--ccccccccc
Q 021893           39 HLKVDFGDITALEKIFKESGD-QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL--ARSGRMLAS  115 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~-~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~--~~~g~~~~~  115 (306)
                      ++.++++|+++|+++++++++ ++++|++++++|++|.+.+    +++|.++|++||++||+||+|+++  +..|..+ .
T Consensus       172 ~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~----l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~-~  246 (427)
T 2w8t_A          172 IVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAP----LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGV-Y  246 (427)
T ss_dssp             EEEECTTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCH-H
T ss_pred             eEEeCCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCch-H
Confidence            356778999999999986543 7899999999999999887    999999999999999999999963  3334433 3


Q ss_pred             ccCCCCCc----EEEecccccCCcccceeeEeCHHHHhhcCCCC--ccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHH
Q 021893          116 DWEEVRPD----MVILGKALGGGVIPVSAVLADKEVMLCIQPGE--HGSTFGGNPLASAVAIASLDVIRD-EKLAERSAH  188 (306)
Q Consensus       116 ~~~~~~~d----~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~  188 (306)
                      +.+++.++    +.|+||.++  . +.||+++++++++.+....  ...+.+.+++.++++.++++.+.. ++..+++++
T Consensus       247 ~~~~~~~~~di~~~s~sK~~g--~-~gG~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~  323 (427)
T 2w8t_A          247 EAQGLEGQIDFVVGTFSKSVG--T-VGGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWS  323 (427)
T ss_dssp             HHTTCTTCCSEEEEESSSTTC--S-CCEEEEECCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred             hhcCCCcCCcEEEecchhhhc--c-CCCEEEeCHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            33444444    669999996  3 5588999999998887642  223456788888888899998865 567889999


Q ss_pred             HHHHHHHHHHHHHhhCCCceeeEEE-eeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-------CCEEEEeCCCC
Q 021893          189 LGEELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-------DTIVRLTPPLS  260 (306)
Q Consensus       189 ~~~~l~~~L~~~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------~~~lRi~~~~~  260 (306)
                      +++++++.|++++  +   ....+. .|.++++.+++   .....++++.|+++||.+.++.       .+++|++++..
T Consensus       324 ~~~~l~~~L~~~g--~---~~~~~~~~~~~~~~~~~~---~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~~~  395 (427)
T 2w8t_A          324 NARALHGGLKAMG--F---RLGTETCDSAIVAVMLED---QEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAE  395 (427)
T ss_dssp             HHHHHHHHHHHHT--C---EESCSSCCSSEEEEEESS---HHHHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECCTT
T ss_pred             HHHHHHHHHHHcC--C---cccCCCCCCCEEEEEECC---HHHHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeCCC
Confidence            9999999999872  2   111123 67788888764   4567789999999999998642       36899999988


Q ss_pred             CCHHHHHHHHHHHHHHHhhhcCCCCC
Q 021893          261 ISSNELQEGSKALHDVLELDLPKMRK  286 (306)
Q Consensus       261 ~t~~~i~~~~~~l~~~l~~~~~~~~~  286 (306)
                      +++++++.++++|+++++ ++.+.+.
T Consensus       396 ~t~e~i~~~~~~l~~~l~-~~~~~~~  420 (427)
T 2w8t_A          396 HTPAQIQTVLGMFQAAGR-AVGVIGL  420 (427)
T ss_dssp             CCHHHHHHHHHHHHHHHH-HHTCC--
T ss_pred             CCHHHHHHHHHHHHHHHH-HhCcccc
Confidence            999999999999999999 8766443

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=99.94  E-value=1.9e-26  Score=207.15  Aligned_cols=223  Identities=17%  Similarity=0.190  Sum_probs=168.8

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |++.|+++++   +++++|++++++|++|.. .+.+.+++|.++|++||+++|+||+|+++++.+.....+.++..+++.
T Consensus       143 d~~~l~~~l~---~~~~~v~~~~~~nptG~~-~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~  218 (375)
T 3op7_A          143 DLEKLRQLIR---PTTKMICINNANNPTGAV-MDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVN  218 (375)
T ss_dssp             CHHHHHHHCC---TTCCEEEEESSCTTTCCC-CCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEEEE
T ss_pred             CHHHHHHhhc---cCCeEEEEcCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhhcCCEEEEe
Confidence            8999999997   578899999999999965 579999999999999999999999999875543322234455567788


Q ss_pred             Eeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHh
Q 021893          126 ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQ  202 (306)
Q Consensus       126 s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~  202 (306)
                      |+||.++ +|+ |+||+++++++++.+.......+++.+++.+.++..+++....  ++..++++++.+.+.+.|++   
T Consensus       219 s~sK~~~~~G~-r~G~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~---  294 (375)
T 3op7_A          219 SLSKTYSLPGI-RIGWVAANHQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEE---  294 (375)
T ss_dssp             ESSSSSSCGGG-CCEEEECCHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred             EChhhcCCccc-ceEEEEeCHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhh---
Confidence            9999998 898 9999999999999998877777888889988888888875432  22344445555555555554   


Q ss_pred             hCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          203 QFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       203 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                       .+......+..|.+.++.++.   ..+..++++.|+ ++||.+.|+.    ++++|+++  ..+.+++++++++|++++
T Consensus       295 -~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~i~~~l~~l~~~l  368 (375)
T 3op7_A          295 -EPLVSYIRPAVVSTSFVKIAV---DMPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGF--ACEQETLIKGLEKLSQFL  368 (375)
T ss_dssp             -CTTEEECCCSSSSCEEEEECC---SSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEECC--CSCHHHHHHHHHHHHHHH
T ss_pred             -CCCceEecCCCeEEEeEEcCC---CCCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEe--cCCHHHHHHHHHHHHHHH
Confidence             222322333455666776664   345678888885 7899998753    68999994  456699999999999999


Q ss_pred             hhhcCC
Q 021893          278 ELDLPK  283 (306)
Q Consensus       278 ~~~~~~  283 (306)
                      + ++.+
T Consensus       369 ~-~~~~  373 (375)
T 3op7_A          369 R-RFDK  373 (375)
T ss_dssp             G-GGC-
T ss_pred             H-HHhh
Confidence            9 7653

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=99.94  E-value=1.5e-25  Score=204.98  Aligned_cols=261  Identities=15%  Similarity=0.164  Sum_probs=185.7

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----cccccC-CCHHHHHHHHHhcCCcEEEEEEccccCCCCc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----HLKVDF-GDITALEKIFKESGDQIAGFLFEPIQGEAGV   75 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~   75 (306)
                      +.+|++...+||+....+..........    |..+.     +....+ .|++.|++.++   +++++|++++++|++|.
T Consensus       125 gd~Vl~~~p~y~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~p~nptG~  197 (429)
T 1yiz_A          125 GDEVIIIEPFFDCYEPMVKAAGGIPRFI----PLKPNKTGGTISSADWVLDNNELEALFN---EKTKMIIINTPHNPLGK  197 (429)
T ss_dssp             TCEEEEEESCCTTHHHHHHHTTCEEEEE----ECBCCCSSSSEEGGGCBCCHHHHHHHCC---TTEEEEEEESSCTTTCC
T ss_pred             CCEEEEcCCCchhHHHHHHHcCCEEEEE----eCCcccccccccccCcccCHHHHHHHhc---cCceEEEECCCCCCCCc
Confidence            3578899999988665443322211110    11110     000122 48999999886   57899999999999996


Q ss_pred             ccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccc----cCCCCCcEEEeccccc-CCcccceeeEeCHHHHh
Q 021893           76 IIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASD----WEEVRPDMVILGKALG-GGVIPVSAVLADKEVML  149 (306)
Q Consensus        76 ~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~----~~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~  149 (306)
                      + .+++.+++|.++|++||+++|+||+|+++.+.|..+ ++.    ..+..+++.|+||.++ +|+ |+||+++++++++
T Consensus       198 ~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~-r~G~~~~~~~~~~  275 (429)
T 1yiz_A          198 V-MDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGW-KIGWAYGPEALLK  275 (429)
T ss_dssp             C-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGG-CCEEEESCHHHHH
T ss_pred             c-CCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCc-ceEEEEeCHHHHH
Confidence            6 578999999999999999999999999876655421 121    2334455779999999 899 9999999999988


Q ss_pred             hcCCCCccCCCCCCHHHHHHHHHHHHH-----Hhh----ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEE
Q 021893          150 CIQPGEHGSTFGGNPLASAVAIASLDV-----IRD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV  220 (306)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~aa~~al~~-----~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i  220 (306)
                      .+.......+++.+++++.++.++++.     ...    ++..++++++++.+.+.|++..     .....+..|.++++
T Consensus       276 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~~g~~~~~  350 (429)
T 1yiz_A          276 NLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEVG-----MNPTVPQGGYFMVA  350 (429)
T ss_dssp             HHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHT-----CEEEECSBSSEEEE
T ss_pred             HHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC-----CcccCCCcceEEEE
Confidence            877655556788899999888888887     321    2345566666777777776651     33333446778898


Q ss_pred             EEecCC---------ChhhHHHHHHHHH-HCCceeccCC-----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          221 EFDKTA---------LPVSAYDICLKMK-ERGILAKPTH-----------DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       221 ~~~~~~---------~~~~~~~~~~~l~-~~Gi~~~~~~-----------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .++...         ...+..++++.|+ ++||.+.|+.           .+++|++++  .++++|++++++|+++++
T Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l~  427 (429)
T 1yiz_A          351 DWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFF--KKDENLQKAAEILRKWKG  427 (429)
T ss_dssp             ECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECC--SCHHHHHHHHHHHHHHSC
T ss_pred             EcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEec--CCHHHHHHHHHHHHHhcc
Confidence            887420         0035678888887 7899998741           579999975  589999999999998876

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=99.93  E-value=1e-25  Score=207.46  Aligned_cols=226  Identities=17%  Similarity=0.227  Sum_probs=168.3

Q ss_pred             CCHHHHHHHHH----hcCCcEEEEE-EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc----ccc
Q 021893           45 GDITALEKIFK----ESGDQIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM----LAS  115 (306)
Q Consensus        45 ~d~~~le~~i~----~~~~~~~~v~-v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~----~~~  115 (306)
                      .|++.|+++++    +. .++++|+ ++.++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|..    ..+
T Consensus       198 ~d~~~L~~~l~~~~~~~-~~~k~v~~~~~~~NPtG~~-~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~  275 (448)
T 3aow_A          198 MKVEILEEKLKELKSQG-KKVKVVYTVPTFQNPAGVT-MNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKAL  275 (448)
T ss_dssp             ECHHHHHHHHHHHHHTT-CCEEEEEECCSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGG
T ss_pred             CCHHHHHHHHhhhhccC-CCCeEEEECCCCCCCcCCC-CCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhc
Confidence            38999999997    32 3688875 55678888865 67999999999999999999999999987655542    222


Q ss_pred             ccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--h--ccHHHHHHHHHH
Q 021893          116 DWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--D--EKLAERSAHLGE  191 (306)
Q Consensus       116 ~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~--~~~~~~~~~~~~  191 (306)
                      +..+..+++.||||.+++|+ |+||+++++++++.+.......+++.+++++.++.++++...  .  ++..++++++++
T Consensus       276 ~~~~~vi~~~S~SK~~~~Gl-riG~v~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~  354 (448)
T 3aow_A          276 DNEGRVIYLGTFSKILAPGF-RIGWMVGDPGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRD  354 (448)
T ss_dssp             CTTSCEEEEEESTTTTCGGG-CCEEEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEccchhhccccc-cEEEEEeCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence            33344556779999999999 999999999999887754444556678888888888886421  1  223455556666


Q ss_pred             HHHHHHHHHHhhCC-CceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC--------CCCEEEEeCCCCCC
Q 021893          192 ELRQHLFKIQQQFP-NYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT--------HDTIVRLTPPLSIS  262 (306)
Q Consensus       192 ~l~~~L~~~~~~~~-~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------~~~~lRi~~~~~~t  262 (306)
                      .+.+.|++.   +| +.....+..|+++|+.++.   ..+..++++.|+++||.+.|+        ..+++|++++. .+
T Consensus       355 ~l~~~L~~~---~~~g~~~~~p~~g~~~~v~~~~---~~~~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~-~~  427 (448)
T 3aow_A          355 AMLEALEEF---MPEGVKWTKPEGGMFIWVTLPD---GIDSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTY-VD  427 (448)
T ss_dssp             HHHHHHHHH---CCTTCEECCCSBSSEEEEECST---TCCHHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSS-SC
T ss_pred             HHHHHHHHh---CCCCeEEeCCCccEEEEEEcCC---CCCHHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeCC-CC
Confidence            666666654   22 1222234567888988864   345778999999999999874        36799999765 48


Q ss_pred             HHHHHHHHHHHHHHHhhhc
Q 021893          263 SNELQEGSKALHDVLELDL  281 (306)
Q Consensus       263 ~~~i~~~~~~l~~~l~~~~  281 (306)
                      +++|++++++|+++++ ++
T Consensus       428 ~e~i~~~~~~L~~~l~-~~  445 (448)
T 3aow_A          428 EDKIMEGIKRLAETIK-EE  445 (448)
T ss_dssp             THHHHHHHHHHHHHHH-HH
T ss_pred             HHHHHHHHHHHHHHHH-HH
Confidence            9999999999999988 54

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=99.93  E-value=2.4e-25  Score=201.38  Aligned_cols=227  Identities=21%  Similarity=0.292  Sum_probs=178.8

Q ss_pred             cccccCCCHHHHHHHHHhcCC---cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cc-ccccccc
Q 021893           39 HLKVDFGDITALEKIFKESGD---QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GL-ARSGRML  113 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~---~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~-~~~g~~~  113 (306)
                      +..+|+.|+++|++.++++.+   ++++|++++++|++|.+.+    +++|.++|++||+++|+||+|+ ++ +..+...
T Consensus       151 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~  226 (399)
T 3tqx_A          151 RYRYKNNAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIAD----LKSICDLADKYNALVMVDDSHAVGFIGENGRGT  226 (399)
T ss_dssp             EEEECTTCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCH
T ss_pred             eeEeCCCCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCccccccCCCCCch
Confidence            355677899999999997543   7999999999999998887    9999999999999999999995 54 3333322


Q ss_pred             ccccCCC--CCcEE--EecccccCCcccceeeEeCHHHHhhcCCCCc--cCCCCCCHHHHHHHHHHHHHH-h-hccHHHH
Q 021893          114 ASDWEEV--RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEH--GSTFGGNPLASAVAIASLDVI-R-DEKLAER  185 (306)
Q Consensus       114 ~~~~~~~--~~d~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aa~~al~~~-~-~~~~~~~  185 (306)
                       .+.+++  .+|++  |+||.++ |+ +.||+++++++++.+.....  ..+.+.+++.++++.++++.. . .++..++
T Consensus       227 -~~~~~~~~~~di~~~s~sK~~~-g~-~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  303 (399)
T 3tqx_A          227 -PEYCGVADRVDILTGTLGKALG-GA-SGGYTSGHKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQ  303 (399)
T ss_dssp             -HHHHTCTTCCSEEEEESSSSSC-SS-CCEEEEECHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred             -HHhhCCCCCCcEEEecchHhcc-cC-ceEEEEcCHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHH
Confidence             334444  56766  8999999 66 77999999999888765322  223366788888888888877 3 2557888


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------CCCEEEEeCC
Q 021893          186 SAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------HDTIVRLTPP  258 (306)
Q Consensus       186 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~~~~lRi~~~  258 (306)
                      ++++.+++++.|++.+..      ..+..|.++++.++.   ..+..++++.|.++||.+.+.       +.+++|++++
T Consensus       304 ~~~~~~~l~~~L~~~g~~------~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~  374 (399)
T 3tqx_A          304 LQENSRYFRAGMEKLGFQ------LVPGNHPIIPVMLGD---AQLATNMADHLLQEGIYVVGFSYPVVPMGKARIRVQMS  374 (399)
T ss_dssp             HHHHHHHHHHHHHHHTCC------BCCCSSSEEEEEEEC---HHHHHHHHHHHHHTTEECCEECTTTSCTTCEEEEEECC
T ss_pred             HHHHHHHHHHHHHHcCCC------cCCCCCCEEEEEeCC---HHHHHHHHHHHHHCCCEEeeeCCCCCCCCCceEEEEee
Confidence            999999999999987311      225677888888874   456789999999999999843       3469999998


Q ss_pred             CCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          259 LSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       259 ~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      ..++++++++++++|+++++ ++.
T Consensus       375 ~~~~~~~i~~~~~~l~~~~~-~~~  397 (399)
T 3tqx_A          375 AVHTQQQLDRAIEAFGQVGK-KLG  397 (399)
T ss_dssp             TTCCHHHHHHHHHHHHHHHH-HTT
T ss_pred             cCCCHHHHHHHHHHHHHHHH-Hhc
Confidence            88999999999999999998 653

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=99.93  E-value=3.1e-25  Score=202.88  Aligned_cols=266  Identities=14%  Similarity=0.094  Sum_probs=182.4

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC----CCHHHHHHHHHhcC---------C
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF----GDITALEKIFKESG---------D   59 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~----~d~~~le~~i~~~~---------~   59 (306)
                      .|++.+|+.++...++.++..+....-...|.+++           ++.+|.    .|++.|++++++++         +
T Consensus       110 ~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~  189 (425)
T 2r2n_A          110 DLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKN  189 (425)
T ss_dssp             EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEEEECEETTEECHHHHHHHHTTSCSTTSSSTTSC
T ss_pred             cEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeCcCCCCCCHHHHHHHHHhhhccccccccCC
Confidence            56666666666555555554432222222233322           122332    37999999998432         3


Q ss_pred             cEEEEEEc-cccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc----cccccCCCCCcEEEecccccCC
Q 021893           60 QIAGFLFE-PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM----LASDWEEVRPDMVILGKALGGG  134 (306)
Q Consensus        60 ~~~~v~v~-~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~----~~~~~~~~~~d~~s~sK~~~~G  134 (306)
                      ++++|+++ .++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|..    ..++..+....+.|+||.+++|
T Consensus       190 ~~~~v~~~~~~~NPtG~~-~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~G  268 (425)
T 2r2n_A          190 TPKFLYTVPNGNNPTGNS-LTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSG  268 (425)
T ss_dssp             CCSEEEECCSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCST
T ss_pred             CceEEEECCCCcCCCCCc-CCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCc
Confidence            57788775 578888865 57999999999999999999999999987555532    2222223334566999999999


Q ss_pred             cccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhc-------cHHHHHHHHHHHHHHHHHHHHhhCCCc
Q 021893          135 VIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE-------KLAERSAHLGEELRQHLFKIQQQFPNY  207 (306)
Q Consensus       135 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~-------~~~~~~~~~~~~l~~~L~~~~~~~~~~  207 (306)
                      + |+||+++++++++.+.......+++.+++++.++.++++.+.++       +..++++++++.+.+.|++.   +++.
T Consensus       269 l-RiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~  344 (425)
T 2r2n_A          269 L-RIGFLTGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKW---LTGL  344 (425)
T ss_dssp             T-CCEEEEEEHHHHHHHHHHHHTTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CSSS
T ss_pred             c-ceEEEecCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCC
Confidence            9 99999999999888776555566778999999988888764322       23344445555555555543   2222


Q ss_pred             e-eeEEEeeeEEEEEEecCCChhhHHH-HHHHHHHCCceeccC---------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          208 V-KEVRGRGLFNAVEFDKTALPVSAYD-ICLKMKERGILAKPT---------HDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       208 ~-~~~~~~g~~~~i~~~~~~~~~~~~~-~~~~l~~~Gi~~~~~---------~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      . ...+..|+++|+.++.   ..+..+ +.+.|.++||.+.|+         +.+++|++++. .+++++++++++|+++
T Consensus       345 ~~~~~p~~g~~~~~~~~~---~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~  420 (425)
T 2r2n_A          345 AEWHVPAAGMFLWIKVKG---INDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS-ASPEQMDVAFQVLAQL  420 (425)
T ss_dssp             EEECCCSBSSEEEEEETT---CSCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSS-CCHHHHHHHHHHHHHH
T ss_pred             eEEeCCCceEEEEEEeCC---CCCHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHH
Confidence            2 2335678888998874   223344 578888999999874         24799999753 6999999999999998


Q ss_pred             Hh
Q 021893          277 LE  278 (306)
Q Consensus       277 l~  278 (306)
                      ++
T Consensus       421 l~  422 (425)
T 2r2n_A          421 IK  422 (425)
T ss_dssp             HH
T ss_pred             HH
Confidence            87

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=99.93  E-value=4.3e-25  Score=200.54  Aligned_cols=257  Identities=18%  Similarity=0.164  Sum_probs=185.1

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC----CCHHHHHHHHH----hcCCcEEEEE-EccccCC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF----GDITALEKIFK----ESGDQIAGFL-FEPIQGE   72 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d~~~le~~i~----~~~~~~~~v~-v~~~~~~   72 (306)
                      +.+|++...+||+....+......             +..+|.    .|++.|+++++    +. +++++|+ ++.++|+
T Consensus       122 gd~vl~~~p~~~~~~~~~~~~g~~-------------~~~v~~~~~~~d~~~l~~~l~~~~~~~-~~~~~v~~~~~~~np  187 (407)
T 2zc0_A          122 GDVVITENPSYINTLLAFEQLGAK-------------IEGVPVDNDGMRVDLLEEKIKELKAKG-QKVKLIYTIPTGQNP  187 (407)
T ss_dssp             TCEEEEEESCCHHHHHHHHTTTCE-------------EEEEEEETTEECHHHHHHHHHHHHHTT-CCEEEEEECCSSCTT
T ss_pred             CCEEEEeCCChHHHHHHHHHcCCE-------------EEEcccCCCCCCHHHHHHHHHhhhccc-CCceEEEECCCCCCC
Confidence            357888888887754333221111             111221    48999999998    42 3678874 6677888


Q ss_pred             CCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-ccccc---CCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893           73 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDW---EEVRPDMVILGKALGGGVIPVSAVLADKEVM  148 (306)
Q Consensus        73 ~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~---~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~  148 (306)
                      +|.+ .+.+++++|.++|++||+++|+||+|+++.+.|.. .++..   .+...++.|+||.+++|+ |+||++++++++
T Consensus       188 tG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~-r~G~~~~~~~~~  265 (407)
T 2zc0_A          188 MGVT-MSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLGTGF-RIGWIIAEGEIL  265 (407)
T ss_dssp             TCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTCTTS-CCEEEECCHHHH
T ss_pred             CCcC-CCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccCCCc-ceEEEecCHHHH
Confidence            9965 57899999999999999999999999987655542 11222   223345669999999999 999999999998


Q ss_pred             hhcCCCCccCCCCCCHHHHHHHHHHHHHH--h---hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893          149 LCIQPGEHGSTFGGNPLASAVAIASLDVI--R---DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD  223 (306)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~aa~~al~~~--~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~  223 (306)
                      +.+.......++..+++.+.++.++++..  .   -++..++++++++++.+.|++...   +.....+..|.++++.++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~~~~~~~~~~~  342 (407)
T 2zc0_A          266 KKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLP---NAEFTKPIAGMFVMFFLP  342 (407)
T ss_dssp             HHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCT---TSCBCCCSBSSEEEEECS
T ss_pred             HHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCEEecCCCcEEEEEEcC
Confidence            88765445556667888888888888753  2   244667777888888888876421   121222456778888876


Q ss_pred             cCCChhhHHHHHHHHHHC-CceeccC--------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          224 KTALPVSAYDICLKMKER-GILAKPT--------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       224 ~~~~~~~~~~~~~~l~~~-Gi~~~~~--------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      .   +.+..++++.|.++ ||.+.++        ..+++|++++.. +++++++++++|+++++ ++.
T Consensus       343 ~---~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~-~~~  405 (407)
T 2zc0_A          343 E---GADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRP-SKEEIPIGIKKLAKLYK-EKF  405 (407)
T ss_dssp             T---TCCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSS-CTTHHHHHHHHHHHHHH-HHC
T ss_pred             C---CCCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHH-HHh
Confidence            4   34577899999999 9999874        357999998765 89999999999999998 653

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=99.93  E-value=4.4e-25  Score=199.14  Aligned_cols=226  Identities=16%  Similarity=0.181  Sum_probs=168.7

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-cccccCC-CCC
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWEE-VRP  122 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~~~-~~~  122 (306)
                      .|++.|++++++  +++++|++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|.. .+..... ..+
T Consensus       147 ~d~~~l~~~l~~--~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~  223 (391)
T 3dzz_A          147 VNWADLEEKLAT--PSVRMMVFCNPHNPIGYA-WSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAK  223 (391)
T ss_dssp             CCHHHHHHHHTS--TTEEEEEEESSBTTTTBC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTG
T ss_pred             ecHHHHHHHHhc--cCceEEEEECCCCCCCcc-cCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCcccc
Confidence            489999999974  478899888899999965 46788999999999999999999999988766642 2232222 125


Q ss_pred             c----EEEeccccc-CCcccceeeEeC-HHHHhhcCCCCc-cCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHH
Q 021893          123 D----MVILGKALG-GGVIPVSAVLAD-KEVMLCIQPGEH-GSTFGGNPLASAVAIASLDVIR--DEKLAERSAHLGEEL  193 (306)
Q Consensus       123 d----~~s~sK~~~-~G~~~~g~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~l  193 (306)
                      |    +.|+||.++ +|+ |+||++++ +++++.+..... ...++.+++++.++.++++...  .++..++++++.+++
T Consensus       224 d~~i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l  302 (391)
T 3dzz_A          224 NWVVSLISPSKTFNLAAL-HAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYA  302 (391)
T ss_dssp             GGEEEEECSHHHHTCTTT-CCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEeChhhccccch-hheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence            5    568899998 899 99999997 888887765422 3445678888888888887632  134566667777777


Q ss_pred             HHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHH
Q 021893          194 RQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNEL  266 (306)
Q Consensus       194 ~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i  266 (306)
                      .+.|++.   +++.....+..+.++++.++..  ..+..++++.|+ ++||.+.++      +.+++|++++  ++++++
T Consensus       303 ~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i  375 (391)
T 3dzz_A          303 REFLAKE---VPEVKVLDSNASYLAWVDISAL--GMNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA--CPKELV  375 (391)
T ss_dssp             HHHHHHH---CTTSEECCCCBSSEEEEECGGG--CSCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC--SCHHHH
T ss_pred             HHHHHhh---CCCcEEeccCceEEEEEehhhc--CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHH
Confidence            7777663   2223333345566677777641  246788999996 889999874      2489999965  689999


Q ss_pred             HHHHHHHHHHHhhhcC
Q 021893          267 QEGSKALHDVLELDLP  282 (306)
Q Consensus       267 ~~~~~~l~~~l~~~~~  282 (306)
                      ++++++|+++++ ++.
T Consensus       376 ~~~l~~l~~~l~-~~~  390 (391)
T 3dzz_A          376 IDGMQRLKQGVL-NLN  390 (391)
T ss_dssp             HHHHHHHHHHHH-TCC
T ss_pred             HHHHHHHHHHHH-Hhh
Confidence            999999999998 654

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.93  E-value=1.1e-25  Score=205.90  Aligned_cols=261  Identities=18%  Similarity=0.191  Sum_probs=184.6

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC----CCHHHHHHHHHhc-----CCcEEEEE-EccccCC
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF----GDITALEKIFKES-----GDQIAGFL-FEPIQGE   72 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d~~~le~~i~~~-----~~~~~~v~-v~~~~~~   72 (306)
                      .+|++...+||+....+......             ++.+|.    .|++.|++++++.     +.++++|+ ++.++|+
T Consensus       134 d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~np  200 (425)
T 1vp4_A          134 SYCVLDDPAYLGAINAFRQYLAN-------------FVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNP  200 (425)
T ss_dssp             CEEEEEESCCHHHHHHHHTTTCE-------------EEEEEEETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTT
T ss_pred             CEEEEeCCCcHHHHHHHHHcCCE-------------EEEeccCCCCCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCC
Confidence            56777777777755443322211             111121    4899999999851     13688874 6778888


Q ss_pred             CCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-ccc---ccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893           73 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LAS---DWEEVRPDMVILGKALGGGVIPVSAVLADKEVM  148 (306)
Q Consensus        73 ~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~---~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~  148 (306)
                      +|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|.. .++   +..+....+.|+||.+++|+ |+||++++++++
T Consensus       201 tG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~G~-r~G~~~~~~~~~  278 (425)
T 1vp4_A          201 AGVT-TSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPGL-RIGMVAGSKEFI  278 (425)
T ss_dssp             TCCC-CCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGGG-CEEEEECCHHHH
T ss_pred             CCCc-CCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEecccccccccc-ceEEEeeCHHHH
Confidence            8865 57899999999999999999999999987655542 122   22223334569999999999 999999999998


Q ss_pred             hhcCCCCccCCCCCCHHHHHHHHHHHHHH--hh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec
Q 021893          149 LCIQPGEHGSTFGGNPLASAVAIASLDVI--RD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK  224 (306)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~aa~~al~~~--~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~  224 (306)
                      +.+.......+++.+++++.++.++++..  ..  ++..++++++++.+.+.|++.....+++....+..|.++|+.++.
T Consensus       279 ~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~  358 (425)
T 1vp4_A          279 RKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPE  358 (425)
T ss_dssp             HHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCT
T ss_pred             HHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCC
Confidence            88765444445667889998888888763  11  335566677777777777765221001222234567888888864


Q ss_pred             CCChhhHHHHHHHHHHCCceeccC--------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          225 TALPVSAYDICLKMKERGILAKPT--------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       225 ~~~~~~~~~~~~~l~~~Gi~~~~~--------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                         ..+..++++.|.++||.+.|+        ..+++|++++.. +++++++++++|+++++ ++.+
T Consensus       359 ---~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~~e~i~~~l~~l~~~l~-~~~~  420 (425)
T 1vp4_A          359 ---GFDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCLP-PDEKIVEGIKRLREVVL-EYGK  420 (425)
T ss_dssp             ---TCCTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSSS-CHHHHHHHHHHHHHHHH-HHHH
T ss_pred             ---CCCHHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHH-HHHh
Confidence               234567899999999999874        357999998654 89999999999999998 6543

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=99.93  E-value=4e-25  Score=199.54  Aligned_cols=221  Identities=13%  Similarity=0.132  Sum_probs=165.9

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccccC-C---C
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWE-E---V  120 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~~~-~---~  120 (306)
                      |++.|+++++   +++++|++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|. ..+...+ +   .
T Consensus       149 d~~~l~~~l~---~~~~~v~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  224 (389)
T 1gd9_A          149 NVDELKKYVT---DKTRALIINSPCNPTGAV-LTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFER  224 (389)
T ss_dssp             CHHHHHHHCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGG
T ss_pred             CHHHHHHhcC---cCceEEEEECCCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCC
Confidence            7999999987   468888888889999965 5788999999999999999999999998765554 2222221 1   2


Q ss_pred             CCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHH
Q 021893          121 RPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQ  195 (306)
Q Consensus       121 ~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~----~~~~~~~~~~~~~l~~  195 (306)
                      ...+.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++....    ++..++++++++++.+
T Consensus       225 ~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~  303 (389)
T 1gd9_A          225 TITVNGFSKTFAMTGW-RLGFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWK  303 (389)
T ss_dssp             EEEEEESTTTTTCGGG-CCEEEECCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecChhhcCCccc-ceEEEEECHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHH
Confidence            223558999998 898 9999999999988877655555677888888888888875432    3345666777777777


Q ss_pred             HHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHH
Q 021893          196 HLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQE  268 (306)
Q Consensus       196 ~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~  268 (306)
                      .|++.+     .....+..|.++++.++..  +.+..++++.|+ ++||.+.++      +.+++|++++  .+++++++
T Consensus       304 ~L~~~g-----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~--~~~~~i~~  374 (389)
T 1gd9_A          304 RLNEMG-----LPTVKPKGAFYIFPRIRDT--GLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYA--TAYEKLEE  374 (389)
T ss_dssp             HHHHTT-----CCCCCCCBTTEECCBCGGG--TCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECC--SCHHHHHH
T ss_pred             HHHHcC-----CeecCCCeeeEEEEeccCC--CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec--CCHHHHHH
Confidence            777652     2122234566677766531  235678999998 899999875      2679999965  48999999


Q ss_pred             HHHHHHHHHhhhc
Q 021893          269 GSKALHDVLELDL  281 (306)
Q Consensus       269 ~~~~l~~~l~~~~  281 (306)
                      ++++|+++++ +.
T Consensus       375 ~l~~l~~~~~-~~  386 (389)
T 1gd9_A          375 AMDRMERVLK-ER  386 (389)
T ss_dssp             HHHHHHHHHH-HT
T ss_pred             HHHHHHHHHH-hc
Confidence            9999999988 54

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=99.93  E-value=1.2e-25  Score=201.91  Aligned_cols=223  Identities=16%  Similarity=0.122  Sum_probs=164.9

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccc-cc-ccc---ccCC
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG-RM-LAS---DWEE  119 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g-~~-~~~---~~~~  119 (306)
                      .|+++|++++++   ++++++++.++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.| .. ..+   +..+
T Consensus       138 ~d~~~l~~~l~~---~~~~v~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~  213 (377)
T 3fdb_A          138 INLHDVEKGFQA---GARSILLCNPYNPLGMV-FAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAAS  213 (377)
T ss_dssp             CCHHHHHHHHHT---TCCEEEEESSBTTTTBC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHH
T ss_pred             CCHHHHHHHhcc---CCCEEEEeCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCC
Confidence            489999999984   46777777779999965 578889999999999999999999999877666 21 111   1122


Q ss_pred             CCCcEEEeccccc-CCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHH
Q 021893          120 VRPDMVILGKALG-GGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQ  195 (306)
Q Consensus       120 ~~~d~~s~sK~~~-~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~  195 (306)
                      ..+++.|+||.++ +|+ |+||++. ++++++.+.......+++.+++++.++.++++....  ++..++++++.+++.+
T Consensus       214 ~~i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~  292 (377)
T 3fdb_A          214 VCITITAPSKAWNIAGL-KCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLH  292 (377)
T ss_dssp             HEEEEECSTTTTTCGGG-CCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEeChHhccCcch-hheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence            2355679999997 899 9998776 788888877655556678899999998888875322  3456677777777777


Q ss_pred             HHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC------CCCEEEEeCCCCCCHHHHHH
Q 021893          196 HLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT------HDTIVRLTPPLSISSNELQE  268 (306)
Q Consensus       196 ~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~------~~~~lRi~~~~~~t~~~i~~  268 (306)
                      .|++..   +++....+..+.++|+.++...   ...++++.|+++ ||.+.|+      ..+++|++++  .+++++++
T Consensus       293 ~L~~~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~--~~~e~i~~  364 (377)
T 3fdb_A          293 EIPKRI---PGAKITPMQATYLMWIDFRDTT---IEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFA--TSREVLEE  364 (377)
T ss_dssp             HHHHHS---TTCEECCCSBCSEEEEECTTSC---CCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC--SCHHHHHH
T ss_pred             HHHhhC---CCceEecCCeeEEEEEECcccC---CCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeC--CCHHHHHH
Confidence            777642   2233333445666678776421   124677888776 9999875      2689999965  58999999


Q ss_pred             HHHHHHHHHhhhc
Q 021893          269 GSKALHDVLELDL  281 (306)
Q Consensus       269 ~~~~l~~~l~~~~  281 (306)
                      ++++|+++++ ++
T Consensus       365 ~l~~l~~~l~-~~  376 (377)
T 3fdb_A          365 AIDRMAKAVS-HH  376 (377)
T ss_dssp             HHHHHHHHHT-TC
T ss_pred             HHHHHHHHHh-hc
Confidence            9999999988 54

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=99.93  E-value=8.8e-25  Score=201.22  Aligned_cols=219  Identities=16%  Similarity=0.208  Sum_probs=167.5

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccc-----cCC
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD-----WEE  119 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~-----~~~  119 (306)
                      .|+++|++.++   +++++|++++++|++|.+ .+++.+++|.++|++||+++|+||+|+++.+.|...++.     .++
T Consensus       189 ~d~~~l~~~l~---~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~  264 (447)
T 3b46_A          189 IDFEQFEKAIT---SKTKAVIINTPHNPIGKV-FTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQ  264 (447)
T ss_dssp             ECHHHHHTTCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHT
T ss_pred             cCHHHHHHhhc---cCCeEEEEeCCCCCCCcc-cCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCC
Confidence            48999998886   578999999999999965 578999999999999999999999999876655321111     234


Q ss_pred             CCCcEEEeccccc-CCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHH
Q 021893          120 VRPDMVILGKALG-GGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEEL  193 (306)
Q Consensus       120 ~~~d~~s~sK~~~-~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~----~~~~~~~~~~~~~l  193 (306)
                      ..+.+.|+||.++ +|+ |+||+++ ++++++.+.......+++.+++.+.++.++++....    ++..++++++++.+
T Consensus       265 ~~i~i~S~sK~~~~~G~-riG~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l  343 (447)
T 3b46_A          265 LTLTVGSAGKSFAATGW-RIGWVLSLNAELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIF  343 (447)
T ss_dssp             TEEEEEEHHHHTTCTTS-CCEEEECSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             cEEEEecCchhcCCcch-hhEEEEeCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHH
Confidence            5566779999999 899 9999999 999988876544556777888998888888887632    23566777777888


Q ss_pred             HHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCC------------hhhHHHHHHHHH-HCCceeccCC-----------
Q 021893          194 RQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTAL------------PVSAYDICLKMK-ERGILAKPTH-----------  249 (306)
Q Consensus       194 ~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~------------~~~~~~~~~~l~-~~Gi~~~~~~-----------  249 (306)
                      .+.|++++     .....+..|.++|+.++....            ..+..++++.|+ ++||.+.|+.           
T Consensus       344 ~~~L~~~g-----~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~  418 (447)
T 3b46_A          344 TSIFDELG-----LPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAA  418 (447)
T ss_dssp             HHHHHHHT-----CCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGG
T ss_pred             HHHHHHCC-----CeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCC
Confidence            88887762     222335568888888764200            135668998887 5799998752           


Q ss_pred             CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          250 DTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       250 ~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      .+++|+++.  .++++|++++++|++
T Consensus       419 ~~~iRls~~--~~~e~l~~~~~~l~~  442 (447)
T 3b46_A          419 ENLLRFAVC--KDDAYLENAVERLKL  442 (447)
T ss_dssp             TTEEEEECC--SCHHHHHHHHHHGGG
T ss_pred             CCEEEEEEe--CCHHHHHHHHHHHHH
Confidence            689999965  589999999999876

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=99.93  E-value=6.6e-25  Score=199.61  Aligned_cols=221  Identities=14%  Similarity=0.184  Sum_probs=172.1

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc--cccccccccccc
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG--LARSGRMLASDW  117 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g--~~~~g~~~~~~~  117 (306)
                      ..++++|+++||++++++  ++++|++++++|++|.+.+    +++|.++|++||++||+||+|++  +++.|..+. ..
T Consensus       168 ~~~~~~d~~~le~~l~~~--~~~~vi~~~~~nptG~~~~----l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~-~~  240 (409)
T 3kki_A          168 HPFMHNNCDHLRMLIQRH--GPGIIVVDSIYSTLGTIAP----LAELVNISKEFGCALLVDESHSLGTHGPNGAGLL-AE  240 (409)
T ss_dssp             EEECTTCHHHHHHHHHHH--CSCEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHH-HH
T ss_pred             EEecCCCHHHHHHHHHhc--CCeEEEECCCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCccccccCCCCCcch-hh
Confidence            445668999999999964  4689999999999998887    99999999999999999999986  666665442 33


Q ss_pred             CCC--CCcE--EEecccccCCcccceeeEeCHHHHhhcCCCCcc--CCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHH
Q 021893          118 EEV--RPDM--VILGKALGGGVIPVSAVLADKEVMLCIQPGEHG--STFGGNPLASAVAIASLDVIRD-EKLAERSAHLG  190 (306)
Q Consensus       118 ~~~--~~d~--~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~  190 (306)
                      .++  .+|+  .|+||+++++   .|++++++++++.+......  .+...+++.++++.++++.+.. +++.+++++++
T Consensus       241 ~~~~~~~di~~~s~sK~~~~~---gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~  317 (409)
T 3kki_A          241 LGLTREVHFMTASLAKTFAYR---AGAIWCNNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMA  317 (409)
T ss_dssp             HTCGGGCSEEEEESSSTTCSS---CEEEEESSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred             cCCCCCCCEEEeecchhhCCC---ceEEEECHHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence            333  3455  6899999854   37899999888776542221  1223577888888888988765 45777888889


Q ss_pred             HHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc-------CCCCEEEEeCCCCCCH
Q 021893          191 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP-------THDTIVRLTPPLSISS  263 (306)
Q Consensus       191 ~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~-------~~~~~lRi~~~~~~t~  263 (306)
                      +++++.|+++.     +  .+.+.+.++++.++.   .....++++.|+++||.+.+       .+.+++|++++..+++
T Consensus       318 ~~l~~~L~~~g-----~--~~~~~~~~~~~~~~~---~~~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~  387 (409)
T 3kki_A          318 RKLRIGLSQLG-----L--TIRSESQIIGLETGD---ERNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLNSDVND  387 (409)
T ss_dssp             HHHHHHHHTTT-----C--CCCCSSSEEEEEEES---HHHHHHHHHHHHHTTEECEEECTTSSCTTCEEEEEECCTTCCH
T ss_pred             HHHHHHHHHcC-----C--ccCCCCCEEEEEeCC---HHHHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEEEccCCCCH
Confidence            99998888763     1  122577888888874   44577899999999999853       3467999999989999


Q ss_pred             HHHHHHHHHHHHHHhhhc
Q 021893          264 NELQEGSKALHDVLELDL  281 (306)
Q Consensus       264 ~~i~~~~~~l~~~l~~~~  281 (306)
                      +++++++++|+++++ ..
T Consensus       388 e~i~~~~~~l~~~l~-~~  404 (409)
T 3kki_A          388 EQIAKIIEVCSDAVN-YG  404 (409)
T ss_dssp             HHHHHHHHHHHHHHH-HS
T ss_pred             HHHHHHHHHHHHHHh-cC
Confidence            999999999999998 53

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=99.92  E-value=7.5e-26  Score=205.33  Aligned_cols=223  Identities=18%  Similarity=0.219  Sum_probs=161.6

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cccc-----CC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDW-----EE  119 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~-----~~  119 (306)
                      |++.|++.+++   ++++|+++.++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|..+ .+..     .+
T Consensus       168 d~~~l~~~l~~---~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~  243 (407)
T 3nra_A          168 DLTGLEEAFKA---GARVFLFSNPNNPAGVV-YSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAE  243 (407)
T ss_dssp             CHHHHHHHHHT---TCCEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGG
T ss_pred             CHHHHHHHHhh---CCcEEEEcCCCCCCCcc-cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCC
Confidence            89999999984   67777777778999965 578999999999999999999999999876665433 1222     22


Q ss_pred             CCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHH
Q 021893          120 VRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQH  196 (306)
Q Consensus       120 ~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~  196 (306)
                      ..+++.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++....  ++..++++++++++++.
T Consensus       244 ~~i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  322 (407)
T 3nra_A          244 NVVTIMGPSKTESLSGY-RLGVAFGSRAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHV  322 (407)
T ss_dssp             GEEEEECSSSTTCCGGG-CCEEEEECHHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEeCcccccCCCee-eEEEEEcCHHHHHHHHHHHhhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence            2344668999999 899 9999999999988877655555666777777776666642111  22344555555666655


Q ss_pred             HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH-CCceeccC------CCCEEEEeCCCCCCHHHHHHH
Q 021893          197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPT------HDTIVRLTPPLSISSNELQEG  269 (306)
Q Consensus       197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~  269 (306)
                      |+++    +++....+..|.++++.++..  ..+..++++.|++ +||.+.++      ..+++|++++  .++++++++
T Consensus       323 L~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~  394 (407)
T 3nra_A          323 LRGC----EGVFARTPQAGSYLFPRLPKL--AVAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFS--QDHEAAVAA  394 (407)
T ss_dssp             HHTS----TTCBCCCCSBSSEECCBCCCB--SSCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECC--SCHHHHHHH
T ss_pred             HhcC----CCceeccCCeeEEEEEeCCCC--CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeC--CCHHHHHHH
Confidence            5543    222222344567777776641  2457789999976 59999864      3689999976  489999999


Q ss_pred             HHHHHHHHhhhcC
Q 021893          270 SKALHDVLELDLP  282 (306)
Q Consensus       270 ~~~l~~~l~~~~~  282 (306)
                      +++|+++++ ++.
T Consensus       395 ~~~l~~~~~-~~~  406 (407)
T 3nra_A          395 ARRIVTLVE-RYR  406 (407)
T ss_dssp             HHHHHHHHH-HHB
T ss_pred             HHHHHHHHH-Hhh
Confidence            999999998 653

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=99.92  E-value=4.3e-25  Score=200.64  Aligned_cols=255  Identities=13%  Similarity=0.105  Sum_probs=180.1

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCC-CcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLP-GHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      .+|++...+||+....+..........    |..+ +.    ..|+++|++.++   +++++|+++.++|++|.+ .+.+
T Consensus       134 d~Vl~~~p~y~~~~~~~~~~g~~~~~v----~~~~~~~----~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~-~~~~  201 (404)
T 2o1b_A          134 DYVLLPDPGYTDYLAGVLLADGKPVPL----NLEPPHY----LPDWSKVDSQII---DKTKLIYLTYPNNPTGST-ATKE  201 (404)
T ss_dssp             CEEEEEESCCSSHHHHHHHTTCEEEEE----ECCTTTC----CCCGGGSCHHHH---HHEEEEEECSSCTTTCCC-CCHH
T ss_pred             CEEEEcCCCchhHHHHHHHCCCEEEEe----ccCcccC----cCCHHHHHHhhc---cCceEEEEcCCCCCCCcc-CCHH
Confidence            578888888888665443322211100    1111 10    147889999887   468899888888889965 5789


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccC----CCCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCc
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE----EVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEH  156 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~----~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~  156 (306)
                      .+++|.++|++||+++|+||+|+++.+.|...+....    +..+.+.|+||.++ +|+ |+||+++++++++.+.....
T Consensus       202 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~l~~~~~  280 (404)
T 2o1b_A          202 VFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGF-RVGFAVGNKDMIQALKKYQT  280 (404)
T ss_dssp             HHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGG-CCEEEEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchh-heEeEecCHHHHHHHHHHHh
Confidence            9999999999999999999999987554532211111    22345669999998 899 99999999999888765444


Q ss_pred             cCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHH
Q 021893          157 GSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDI  234 (306)
Q Consensus       157 ~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~  234 (306)
                      ..+++.+++++.++.++++....  ++..++++++++.+.+.|++..     +....+..|.++|+.++.   ..+..++
T Consensus       281 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~~g~~~~~~~~~---~~~~~~l  352 (404)
T 2o1b_A          281 HTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKAD-----LPFVHAKGGIYVWLETPP---GYDSEQF  352 (404)
T ss_dssp             HHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEECCCBSSEEEEECCT---TCCHHHH
T ss_pred             hccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcC-----CeecCCCcceEEEEeCCC---CCCHHHH
Confidence            45667888998888888876311  3345666777777777777651     222223456678888763   3456788


Q ss_pred             HHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          235 CLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       235 ~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ++.|+ ++||.+.++      ..+++|++++.  +++++++++++|+++++ ++
T Consensus       353 ~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~--~~e~l~~~l~~l~~~l~-~~  403 (404)
T 2o1b_A          353 EQFLVQEKSILVAPGKPFGENGNRYVRISLAL--DDQKLDEAAIRLTELAY-LY  403 (404)
T ss_dssp             HHHHHHHHCEECEESGGGCGGGTTEEEEECCS--CTTHHHHHHHHHHGGGG-GG
T ss_pred             HHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC--CHHHHHHHHHHHHHHHH-hh
Confidence            99987 579999875      25799999764  78899999999998887 54

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=99.92  E-value=2.9e-24  Score=194.70  Aligned_cols=226  Identities=22%  Similarity=0.316  Sum_probs=176.6

Q ss_pred             ccccCCCHHHHHHHHHhcCC---cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-ccc-ccccccc
Q 021893           40 LKVDFGDITALEKIFKESGD---QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLA-RSGRMLA  114 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~---~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~-~~g~~~~  114 (306)
                      ..++..|+++|++.++++++   ++++|++++++|++|.+.+    +++|.++|++||+++|+||+|+ |+. +.|..+ 
T Consensus       154 ~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~-  228 (401)
T 1fc4_A          154 YRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIAN----LKGVCDLADKYDALVMVDDSHAVGFVGENGRGS-  228 (401)
T ss_dssp             EEECTTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECC----HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCH-
T ss_pred             EEECCCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCC----HHHHHHHHHHcCCEEEEECcccccccCCCCCcc-
Confidence            45567799999999986422   6889999999999998887    9999999999999999999995 773 345432 


Q ss_pred             cccCCC--CCcEE--EecccccCCcccceeeEeCHHHHhhcCCCC--ccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHH
Q 021893          115 SDWEEV--RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGE--HGSTFGGNPLASAVAIASLDVIRD-EKLAERSA  187 (306)
Q Consensus       115 ~~~~~~--~~d~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~  187 (306)
                      .+..++  ..|++  |+||.++|+. . ||+++++++++.+....  ...+++.+++.++++.++++.+.. ++..++++
T Consensus       229 ~~~~~~~~~~di~~~s~sK~~~~~~-g-G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  306 (401)
T 1fc4_A          229 HEYCDVMGRVDIITGTLGKALGGAS-G-GYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLW  306 (401)
T ss_dssp             HHHTTCTTCCSEEEEESSSTTCSSS-C-EEEEECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred             HHHcCCCcCCcEEEecchhhccCCC-C-EEEEcCHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence            222222  23655  8999997665 4 88999999988776432  222557789999999999988764 45788899


Q ss_pred             HHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-------CCEEEEeCCCC
Q 021893          188 HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-------DTIVRLTPPLS  260 (306)
Q Consensus       188 ~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------~~~lRi~~~~~  260 (306)
                      ++++++++.|++..  +. .   .+..|.++++.++.   ..+..++.+.|.++||.+.++.       .+++|++++..
T Consensus       307 ~~~~~l~~~L~~~g--~~-~---~~~~~~~~~~~~~~---~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~  377 (401)
T 1fc4_A          307 ANARQFREQMSAAG--FT-L---AGADHAIIPVMLGD---AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAA  377 (401)
T ss_dssp             HHHHHHHHHHHHTT--CC-B---CCSSSSEEEEEEEC---HHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTT
T ss_pred             HHHHHHHHHHHHcC--Cc-c---cCCCCCEEEEEcCC---hHHHHHHHHHHHHCCcEEeeecCCCCCCCCceEEEEeCCC
Confidence            99999999998862  21 1   14678888888864   4567789999999999998742       35899999888


Q ss_pred             CCHHHHHHHHHHHHHHHhhhcC
Q 021893          261 ISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       261 ~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      ++++++++++++|+++++ ++.
T Consensus       378 ~~~~~i~~~~~~l~~~~~-~~~  398 (401)
T 1fc4_A          378 HTPEQITRAVEAFTRIGK-QLG  398 (401)
T ss_dssp             CCHHHHHHHHHHHHHHHH-HTT
T ss_pred             CCHHHHHHHHHHHHHHHH-HhC
Confidence            999999999999999998 764

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=99.92  E-value=2.1e-24  Score=197.92  Aligned_cols=226  Identities=19%  Similarity=0.129  Sum_probs=158.9

Q ss_pred             CHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-ccc----
Q 021893           46 DITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDW----  117 (306)
Q Consensus        46 d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~----  117 (306)
                      |++.|+++++++   +.++++|++++++|++|.+ .+.+.+++|.++|++||++||+||+|+++++.+..+. ...    
T Consensus       174 d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~  252 (435)
T 3piu_A          174 TETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTT-MTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKD  252 (435)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC
T ss_pred             CHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccc
Confidence            899999999862   2478999998889999965 5788899999999999999999999998655554321 111    


Q ss_pred             CCCC-----Cc----EEEeccccc-CCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-----cc
Q 021893          118 EEVR-----PD----MVILGKALG-GGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-----EK  181 (306)
Q Consensus       118 ~~~~-----~d----~~s~sK~~~-~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-----~~  181 (306)
                      .+++     ++    +.|+||.++ +|+ |+||+++ ++.+++.+..  ....+..+++++.++.+.++...-     ++
T Consensus       253 ~~~d~~~~~~~~~i~i~s~sK~~g~~G~-r~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  329 (435)
T 3piu_A          253 RNCDENSEVWQRVHVVYSLSKDLGLPGF-RVGAIYSNDDMVVAAATK--MSSFGLVSSQTQHLLSAMLSDKKLTKNYIAE  329 (435)
T ss_dssp             -------CGGGGEEEEEESSSSSCCGGG-CEEEEEESCHHHHHHHHH--HGGGSCCCHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             cccccccCCCCCEEEEEeeecccCCCce-eEEEEEeCCHHHHHHHHH--HhhcCCCCHHHHHHHHHHhcChHHHHHHHHH
Confidence            0111     22    569999998 999 9999999 5667666553  223345677777777766653321     22


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC---ChhhHHHHHHHHHHC-CceeccC------CCC
Q 021893          182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA---LPVSAYDICLKMKER-GILAKPT------HDT  251 (306)
Q Consensus       182 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~---~~~~~~~~~~~l~~~-Gi~~~~~------~~~  251 (306)
                      ..++++++.+++++.|++.     ++.......|.++++.++...   ......++++.|+++ ||.+.|+      +++
T Consensus       330 ~~~~~~~~~~~l~~~L~~~-----g~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~  404 (435)
T 3piu_A          330 NHKRLKQRQKKLVSGLQKS-----GISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPG  404 (435)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-----TCEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTT
T ss_pred             HHHHHHHHHHHHHHHHHhc-----CCcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCC
Confidence            3445555555666655543     233333445688898887421   011456889999888 9999873      468


Q ss_pred             EEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          252 IVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       252 ~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      ++|++++.. +++++++++++|+++++ ++.
T Consensus       405 ~iRi~~~~~-~~e~i~~~l~~l~~~l~-~~~  433 (435)
T 3piu_A          405 WFRVCFANL-PERTLDLAMQRLKAFVG-EYY  433 (435)
T ss_dssp             EEEEECSSS-CHHHHHHHHHHHHHHHH-HHC
T ss_pred             EEEEEeeCC-CHHHHHHHHHHHHHHHH-HHh
Confidence            999997544 99999999999999998 664

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=99.92  E-value=2.2e-25  Score=202.90  Aligned_cols=222  Identities=11%  Similarity=0.167  Sum_probs=165.7

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-ccccc----CCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDW----EEV  120 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~----~~~  120 (306)
                      |++.|+++++   +++++|+++.++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|.. .+...    .+.
T Consensus       161 d~~~l~~~i~---~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~  236 (412)
T 2x5d_A          161 ELERAIRESI---PKPRMMILGFPSNPTAQC-VELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDI  236 (412)
T ss_dssp             HHHHHHHTEE---SCCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGT
T ss_pred             CHHHHHHhcc---cCceEEEECCCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCc
Confidence            5677777776   467778887778888865 57899999999999999999999999987655531 11211    233


Q ss_pred             CCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHH
Q 021893          121 RPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHL  197 (306)
Q Consensus       121 ~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L  197 (306)
                      ...+.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++....  ++..++++++++++.+.|
T Consensus       237 ~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L  315 (412)
T 2x5d_A          237 AVEFFTLSKSYNMAGW-RIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGL  315 (412)
T ss_dssp             EEEEEECC-CCSCTTS-CCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCccccCCccc-ceEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            344669999998 899 9999999999988877544555677889999888888864321  345677778888888888


Q ss_pred             HHHHhhCCCceeeEEEeeeEEEEEEecCCChh---hHHHHHHHHHH-CCceeccC------CCCEEEEeCCCCCCHHHHH
Q 021893          198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPV---SAYDICLKMKE-RGILAKPT------HDTIVRLTPPLSISSNELQ  267 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~---~~~~~~~~l~~-~Gi~~~~~------~~~~lRi~~~~~~t~~~i~  267 (306)
                      ++..  +   ....+..|.++++.++.   ..   +..++++.|++ +||.+.++      +.+++|++++.  ++++++
T Consensus       316 ~~~g--~---~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~--~~~~l~  385 (412)
T 2x5d_A          316 REAG--W---MVENPKASMYVWAKIPE---PYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE--NRDRLR  385 (412)
T ss_dssp             HHHT--C---CCCCCSBSSEEEEECCT---TTGGGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS--CHHHHH
T ss_pred             HHCC--C---EecCCCeeeEEEEEcCC---ccCCCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC--CHHHHH
Confidence            8762  2   11223356678888763   22   56789999975 69999875      25799999764  899999


Q ss_pred             HHHHHHHHHHhhhcCC
Q 021893          268 EGSKALHDVLELDLPK  283 (306)
Q Consensus       268 ~~~~~l~~~l~~~~~~  283 (306)
                      +++++|+++++ ++..
T Consensus       386 ~~l~~l~~~l~-~~~~  400 (412)
T 2x5d_A          386 QAVRGIKAMFR-ADGL  400 (412)
T ss_dssp             HHHHHHHHHHH-HTTC
T ss_pred             HHHHHHHHHHH-hcCC
Confidence            99999999999 7654

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=99.92  E-value=3.4e-25  Score=200.20  Aligned_cols=223  Identities=11%  Similarity=0.131  Sum_probs=162.6

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccccc-CCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW-EEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~-~~~~~d~  124 (306)
                      |+++|++.      ++++|++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.+....... .+....+
T Consensus       153 d~~~l~~~------~~~~v~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~  225 (391)
T 3h14_A          153 VPADFAGL------DLAGLMVASPANPTGTM-LDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVI  225 (391)
T ss_dssp             CHHHHTTS------CCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEE
T ss_pred             CHHHHHhc------CCeEEEECCCCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEE
Confidence            67777654      57788888889999965 4788899999999999999999999998766664332222 2233345


Q ss_pred             EEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHh
Q 021893          125 VILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQ  202 (306)
Q Consensus       125 ~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~  202 (306)
                      .|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++.... ++..++++++.+.+.+.|++...
T Consensus       226 ~s~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  304 (391)
T 3h14_A          226 NSFSKYFSMTGW-RVGWMVVPEDQVRVVERIAQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKAGF  304 (391)
T ss_dssp             EESSSTTCCTTS-CCEEEECCGGGHHHHHHHHHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             EechhccCCccc-eeEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            58999998 999 9999999999988877655566777888888888877762111 33456667777777777776521


Q ss_pred             hCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC-------CCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893          203 QFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT-------HDTIVRLTPPLSISSNELQEGSKALH  274 (306)
Q Consensus       203 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~-------~~~~lRi~~~~~~t~~~i~~~~~~l~  274 (306)
                          .....+..+.++++.++..  ..+..++++.|+++ ||.+.++       ..+++|++++.  +++++++++++|+
T Consensus       305 ----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~--~~~~i~~~l~~l~  376 (391)
T 3h14_A          305 ----TRIAPPDGAFYVYADVSDL--TDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR--ATADIEEGLDRLE  376 (391)
T ss_dssp             ----CCBCCCCBTTEEEEECTTT--CSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS--CHHHHHHHHHHHH
T ss_pred             ----CcccCCCeeEEEEEecCcc--CCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC--CHHHHHHHHHHHH
Confidence                1112234457777777631  24677899998886 9999873       25799999654  8899999999999


Q ss_pred             HHHhhhcCCCC
Q 021893          275 DVLELDLPKMR  285 (306)
Q Consensus       275 ~~l~~~~~~~~  285 (306)
                      ++++ +..+..
T Consensus       377 ~~~~-~~~~~~  386 (391)
T 3h14_A          377 AFMQ-ARGEGH  386 (391)
T ss_dssp             HHHH-HC----
T ss_pred             HHHH-Hhcccc
Confidence            9999 776543

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=99.92  E-value=1.6e-25  Score=200.88  Aligned_cols=213  Identities=13%  Similarity=0.180  Sum_probs=161.4

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC----CC
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE----EV  120 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~----~~  120 (306)
                      .|+++|++.++   +++++|++++++|++|.+.+    ++ |.++|++||+++|+||+|+++.+.|...+...+    +.
T Consensus       142 ~d~~~l~~~l~---~~~~~v~~~~p~nptG~~~~----~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~  213 (370)
T 2z61_A          142 FTVESLEEALS---DKTKAIIINSPSNPLGEVID----RE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEK  213 (370)
T ss_dssp             SSHHHHHHHCC---SSEEEEEEESSCTTTCCCCC----HH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSS
T ss_pred             CCHHHHHHhcc---cCceEEEEcCCCCCcCcccC----HH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCc
Confidence            68999999987   46888888889999998877    55 999999999999999999987555543222222    22


Q ss_pred             CCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHH-Hhh--ccHHHHHHHHHHHHHHH
Q 021893          121 RPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV-IRD--EKLAERSAHLGEELRQH  196 (306)
Q Consensus       121 ~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~-~~~--~~~~~~~~~~~~~l~~~  196 (306)
                      ...+.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++. ...  ++..++++++++++.+.
T Consensus       214 ~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  292 (370)
T 2z61_A          214 TILINGFSKLYAMTGW-RIGYVISNDEIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKY  292 (370)
T ss_dssp             EEEEEESTTTTTCGGG-CCEEEECCHHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecChhccCCccc-eEEEEEECHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHH
Confidence            334559999998 898 9999999999988876654555667788888888888865 221  34566777788888888


Q ss_pred             HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHH
Q 021893          197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEG  269 (306)
Q Consensus       197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~  269 (306)
                      |++.+     .....+..|.++++.++.     +..++++.|+ ++||.+.++      +.+++|++++  +++++++++
T Consensus       293 L~~~g-----~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~--~~~~~i~~~  360 (370)
T 2z61_A          293 VKDFG-----WEVNNPIGAYYVFPNIGE-----DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA--NSYENIKEG  360 (370)
T ss_dssp             HHHTT-----CBCCCCCBTTEECCBCSS-----CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC--SCHHHHHHH
T ss_pred             HHHcC-----CeecCCCcceEEEEecCC-----CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe--CCHHHHHHH
Confidence            87752     212223456667766652     4678999998 789999875      2679999976  699999999


Q ss_pred             HHHHHHHHh
Q 021893          270 SKALHDVLE  278 (306)
Q Consensus       270 ~~~l~~~l~  278 (306)
                      +++|+++++
T Consensus       361 ~~~l~~~l~  369 (370)
T 2z61_A          361 LERIKEFLN  369 (370)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHHh
Confidence            999998875

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=99.92  E-value=4.4e-24  Score=195.27  Aligned_cols=262  Identities=12%  Similarity=0.068  Sum_probs=179.1

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhc---CCcEEEEEEccccCCCCcccC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKES---GDQIAGFLFEPIQGEAGVIIP   78 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~   78 (306)
                      +.+|++...+||+....+....+-....   -|...... + ..|+++|+++++++   ++++++|++++++|++|.+ .
T Consensus       132 gd~Vl~~~p~y~~~~~~~~~~~g~~~~~---v~~~~~~~-~-~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~-~  205 (428)
T 1iay_A          132 GDAFLVPSPYYPAFNRDLRWRTGVQLIP---IHCESSNN-F-KITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTT-L  205 (428)
T ss_dssp             TCEEEEESSCCTTHHHHTTTTTCCEEEE---ECCCTTTT-T-CCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCC-C
T ss_pred             CCeEEEccCCCcchHHHHHHhcCCEEEE---eecCCccC-C-cCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCc-C
Confidence            3578899999888654332222211100   01111000 0 13799999999852   3468888888888889865 5


Q ss_pred             ChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-c---cccC----CCCCc----EEEeccccc-CCcccceeeEe-C
Q 021893           79 PDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-A---SDWE----EVRPD----MVILGKALG-GGVIPVSAVLA-D  144 (306)
Q Consensus        79 ~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~---~~~~----~~~~d----~~s~sK~~~-~G~~~~g~~~~-~  144 (306)
                      +.+++++|.++|++||+++|+||+|+++.+.+..+ +   ....    ++.+|    +.|+||.++ +|+ |+||+++ +
T Consensus       206 ~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Gl-r~G~~~~~~  284 (428)
T 1iay_A          206 DKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGF-RVGIIYSFN  284 (428)
T ss_dssp             CHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGG-CEEEEEESC
T ss_pred             CHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCc-eEEEEEeCC
Confidence            89999999999999999999999999865544322 1   1111    12245    569999998 899 9999998 6


Q ss_pred             HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh---h--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893          145 KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR---D--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA  219 (306)
Q Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~---~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~  219 (306)
                      +++++.+...  ...+..+++++.++.++++...   .  ++..++++++++++.+.|+++.     ........|++++
T Consensus       285 ~~~~~~~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~~g~~~~  357 (428)
T 1iay_A          285 DDVVNCARKM--SSFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVG-----IKCLKNNAGLFCW  357 (428)
T ss_dssp             HHHHHHHHHH--HTTSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCBCCCSSSSEEE
T ss_pred             HHHHHHHHHH--HhcccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CcccCCCeeEEEE
Confidence            8888776532  2235678888888887776532   1  3356667777777777777652     2111223678888


Q ss_pred             EEEecCC---ChhhHHHHHHHHHHC-CceeccCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          220 VEFDKTA---LPVSAYDICLKMKER-GILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       220 i~~~~~~---~~~~~~~~~~~l~~~-Gi~~~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +.++...   ......++++.|+++ ||.+.++.      ++++|++++ ..+++++++++++|+++++
T Consensus       358 ~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~  425 (428)
T 1iay_A          358 MDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA-NMDDGTVDIALARIRRFVG  425 (428)
T ss_dssp             EECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS-SSCHHHHHHHHHHHHHHHH
T ss_pred             EechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHh
Confidence            8876411   012456789999987 99998752      579999986 5799999999999999987

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=99.92  E-value=9.5e-25  Score=199.15  Aligned_cols=221  Identities=16%  Similarity=0.194  Sum_probs=164.3

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccccC----CC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWE----EV  120 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~~----~~  120 (306)
                      |++.|+++++   +++++|++++++|++|.+. +++.+++|.++|++||+++|+||+|+++.+.|... ++...    +.
T Consensus       163 d~~~l~~~~~---~~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  238 (422)
T 3fvs_A          163 DPMELAGKFT---SRTKALVLNTPNNPLGKVF-SREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWER  238 (422)
T ss_dssp             CHHHHHTTCC---TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGG
T ss_pred             CHHHHHhhcC---CCceEEEECCCCCCCCcCC-CHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCc
Confidence            7899998887   4789999999999999765 78899999999999999999999999876666422 22221    22


Q ss_pred             CCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHH-------hh--ccHHHHHHHHH
Q 021893          121 RPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVI-------RD--EKLAERSAHLG  190 (306)
Q Consensus       121 ~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~-------~~--~~~~~~~~~~~  190 (306)
                      .+++.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++..       ..  ++..+++++++
T Consensus       239 ~i~~~S~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  317 (422)
T 3fvs_A          239 TLTIGSAGKTFSATGW-KVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCR  317 (422)
T ss_dssp             EEEEEEHHHHHTCGGG-CCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHH
T ss_pred             EEEEecchhccCCccc-eEEEEEeCHHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHH
Confidence            345568999998 899 99999999999888766555667788899999988888752       11  23455566666


Q ss_pred             HHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChh----------hHHHHHHHHHH-CCceeccC-----------
Q 021893          191 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPV----------SAYDICLKMKE-RGILAKPT-----------  248 (306)
Q Consensus       191 ~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~----------~~~~~~~~l~~-~Gi~~~~~-----------  248 (306)
                      +.+.+.|++.     +.....+..|.++|+.+.......          ...++++.+++ +||.+.|+           
T Consensus       318 ~~l~~~L~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~  392 (422)
T 3fvs_A          318 DHMIRSLQSV-----GLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKH  392 (422)
T ss_dssp             HHHHHHHHTT-----TCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTT
T ss_pred             HHHHHHHHHc-----CCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCC
Confidence            6666666554     233345567888888776310000          04578887665 69998873           


Q ss_pred             CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 ~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +.+++|+++  ..+++++++++++|+++++
T Consensus       393 ~~~~iRis~--~~~~e~i~~~l~~l~~~l~  420 (422)
T 3fvs_A          393 FDHYIRFCF--VKDEATLQAMDEKLRKWKV  420 (422)
T ss_dssp             SCSEEEEEC--CCCHHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEEe--cCCHHHHHHHHHHHHHHHh
Confidence            368999995  4599999999999999887

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=99.92  E-value=1.7e-25  Score=201.08  Aligned_cols=217  Identities=16%  Similarity=0.193  Sum_probs=159.6

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-ccc---CCC
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDW---EEV  120 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~---~~~  120 (306)
                      .|++.|++.++   +++++|+++.++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|...+ ...   .+.
T Consensus       146 ~d~~~l~~~l~---~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  221 (376)
T 2dou_A          146 ADLKAVPEGVW---REAKVLLLNYPNNPTGAV-ADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKER  221 (376)
T ss_dssp             BCGGGSCHHHH---HHEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGT
T ss_pred             CCHHHHHHhhc---cCceEEEECCCCCCcCcc-CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCc
Confidence            37889998887   468899888888899965 5789999999999999999999999998765553211 222   233


Q ss_pred             CCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHH
Q 021893          121 RPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHL  197 (306)
Q Consensus       121 ~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L  197 (306)
                      .+.+.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++....  ++..++++++++.+.+.|
T Consensus       222 ~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L  300 (376)
T 2dou_A          222 VVELFSLSKSYNLAGF-RLGFALGSEEALARLERVKGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEAL  300 (376)
T ss_dssp             EEEEEEHHHHHTCGGG-CCEEEEECHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecchhhcCChhh-eeEEEecCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            345669999998 899 9999999999988877544445566788888888887764211  223445555555565555


Q ss_pred             HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHH
Q 021893          198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSK  271 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~  271 (306)
                      ++.   +   ....+..|.++++.++.   ..+..++++.|+++||.+.++      ..+++|++++  .++++++++++
T Consensus       301 ~~~---~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~--~~~~~i~~~l~  369 (376)
T 2dou_A          301 KGV---L---SLLPPRATMYLWGRLPE---GVDDLEFGLRLVERGVALAPGRGFGPGGKGFVRIALV--RPLEELLEAAK  369 (376)
T ss_dssp             TTT---S---EECCCCBSSEEEEECCT---TCCHHHHHHHHHHTTEECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHH
T ss_pred             HHh---c---CccCCCeeEEEEEECCC---CCCHHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEec--CCHHHHHHHHH
Confidence            543   1   11223456778888764   345678999999999999875      2579999965  38999999999


Q ss_pred             HHHHHH
Q 021893          272 ALHDVL  277 (306)
Q Consensus       272 ~l~~~l  277 (306)
                      +|++++
T Consensus       370 ~l~~~l  375 (376)
T 2dou_A          370 RIREAL  375 (376)
T ss_dssp             HHHHTC
T ss_pred             HHHHHh
Confidence            998765

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=99.92  E-value=6.4e-25  Score=198.84  Aligned_cols=255  Identities=17%  Similarity=0.145  Sum_probs=180.1

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC----CCHHHHHHHHHhcCCcEEEE-EEccccCCCCcc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF----GDITALEKIFKESGDQIAGF-LFEPIQGEAGVI   76 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d~~~le~~i~~~~~~~~~v-~v~~~~~~~G~~   76 (306)
                      +.+|++...+||+....+......             +..+|.    .|+++|++.++++  ++++| +++.++|++|.+
T Consensus       115 gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~d~~~l~~~l~~~--~~~~v~~~~~~~nptG~~  179 (397)
T 2zyj_A          115 GSPVLLEAPSYMGAIQAFRLQGPR-------------FLTVPAGEEGPDLDALEEVLKRE--RPRFLYLIPSFQNPTGGL  179 (397)
T ss_dssp             TCEEEEEESCCHHHHHHHHTTCCE-------------EEEEEEETTEECHHHHHHHHHHC--CCSCEEECCBSCTTTCCB
T ss_pred             CCEEEEeCCCcHHHHHHHHHcCCE-------------EEecCcCCCCCCHHHHHHHHhhc--CCeEEEECCCCcCCCCCc
Confidence            357888888888865444332221             111111    4899999999852  56676 467788889865


Q ss_pred             cCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-cccccC------CCCCcEEEecccccCCcccceeeEeCHHHHh
Q 021893           77 IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWE------EVRPDMVILGKALGGGVIPVSAVLADKEVML  149 (306)
Q Consensus        77 ~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~~------~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~  149 (306)
                       .+.+.+++|.++|++||+++|+||+|+++.+.|.. .+...+      +....+.|+||.+++|+ |+||+++++++++
T Consensus       180 -~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~-r~G~~~~~~~~~~  257 (397)
T 2zyj_A          180 -TPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLSPGL-RVAFAVAHPEALQ  257 (397)
T ss_dssp             -CCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTCGGG-CCEEEECCHHHHH
T ss_pred             -CCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEecccccccccc-eeEEEecCHHHHH
Confidence             57899999999999999999999999987665542 222222      22234569999999999 9999999999988


Q ss_pred             hcCCCCccCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCC-CceeeEEEeeeEEEEEEecC
Q 021893          150 CIQPGEHGSTFGGNPLASAVAIASLDVIR---DEKLAERSAHLGEELRQHLFKIQQQFP-NYVKEVRGRGLFNAVEFDKT  225 (306)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~aa~~al~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~g~~~~i~~~~~  225 (306)
                      .+.......+++.+++++.++.++++...   .++..++++++.+.+.+.|++.   ++ +.....+..|.++++.++. 
T Consensus       258 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~g~~~~~~~~g~~~~~~~~~-  333 (397)
T 2zyj_A          258 KLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDRE---VPKEVRYTRPKGGMFVWMELPK-  333 (397)
T ss_dssp             HHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH---SCTTSEECCCSBSSEEEEECST-
T ss_pred             HHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCeEEccCCccEEEEEEcCC-
Confidence            87654444455668888888877776421   1223455555666666666554   22 1222234567888888764 


Q ss_pred             CChhhHHHHHHHHHHCCceeccC--------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          226 ALPVSAYDICLKMKERGILAKPT--------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       226 ~~~~~~~~~~~~l~~~Gi~~~~~--------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                        +.+..++++.|.++||.+.++        .++++|++++.. +++++++++++|+++++ ++
T Consensus       334 --~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~-~~  393 (397)
T 2zyj_A          334 --GLSAEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYATL-DREGIAEGVRRLGRALK-GL  393 (397)
T ss_dssp             --TCCHHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSSS-CHHHHHHHHHHHHHHHH-HH
T ss_pred             --CCCHHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHH-HH
Confidence              345778999999999999874        357999998764 89999999999999987 64

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=99.92  E-value=1.8e-24  Score=198.03  Aligned_cols=264  Identities=11%  Similarity=0.085  Sum_probs=183.3

Q ss_pred             cceEEEEecCCCCcccchhc-ccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCCh
Q 021893            2 QAIIVSCCGCFHGRTLAAIS-MSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPD   80 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~   80 (306)
                      +.+|++.+.+||+....+.. ......    .-|..+..   -..|+++|++++++++.++++++++.++|++|.+ .+.
T Consensus       137 gd~Vl~~~p~y~~~~~~~~~~~g~~~~----~~~~~~~~---~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~-~~~  208 (430)
T 2x5f_A          137 DDTILLPEHNWGNYKLVFNTRNGANLQ----TYPIFDKD---GHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYT-PTH  208 (430)
T ss_dssp             TCEEEEESSCCTHHHHHHTTTTCCEEE----EECCBCTT---SCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCC-CCH
T ss_pred             CCEEEEcCCcCccHHHHHHHhcCCeEE----EEeccCcc---CCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCc-CCH
Confidence            35788888888886544433 222110    00111100   0247899999998754578888877779999964 689


Q ss_pred             hHHHHHHHHHHH-----cCCEEEEehhhhccccccccc-----cccc-CCC---CCcEEEeccccc-CCcccceeeEe--
Q 021893           81 GYLKAVRDLCSK-----YNILMIADEIQSGLARSGRML-----ASDW-EEV---RPDMVILGKALG-GGVIPVSAVLA--  143 (306)
Q Consensus        81 ~~l~~i~~l~~~-----~gi~li~De~~~g~~~~g~~~-----~~~~-~~~---~~d~~s~sK~~~-~G~~~~g~~~~--  143 (306)
                      +.+++|.++|++     ||+++|+||+|+++.+.|..+     .++. .+.   ...+.|+||.++ +|+ |+||+++  
T Consensus       209 ~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~  287 (430)
T 2x5f_A          209 KEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGF-RVGFMTFGT  287 (430)
T ss_dssp             HHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGG-CCEEEEEBC
T ss_pred             HHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCC-CeEEEEEec
Confidence            999999999999     999999999999876655421     1211 222   223558999998 899 9999999  


Q ss_pred             -CHHHHhhcCCCCcc----CCCCCCHHHHHHHHHHHH-HH---hh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE
Q 021893          144 -DKEVMLCIQPGEHG----STFGGNPLASAVAIASLD-VI---RD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG  213 (306)
Q Consensus       144 -~~~~~~~~~~~~~~----~~~~~~~~~~~aa~~al~-~~---~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~  213 (306)
                       ++++++.+......    .+++.+++++.++.++++ ..   .. ++..++++++++.+.+.|++..... ++....+.
T Consensus       288 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-g~~~~~~~  366 (430)
T 2x5f_A          288 SDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHS-HWQAYDFN  366 (430)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTT-TEEECCCC
T ss_pred             CCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-CceeeCCC
Confidence             99988877654333    567788999999888887 32   11 2245556666666666665221121 23222334


Q ss_pred             eeeEEEEEEecCCChhhHHHHHHHHHH-CCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          214 RGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       214 ~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .|.++|+.++    +.+..++++.|.+ +||.+.|+..+++|++++. .+++++++++++|+++++ ++
T Consensus       367 ~g~~~~~~~~----~~~~~~~~~~l~~~~gi~v~~g~~~~iRis~~~-~~~e~i~~~~~~l~~~l~-~~  429 (430)
T 2x5f_A          367 SGYFMAIKVH----DVDPEALRKHLIDKYSIGVIALNATDIRIAFSC-VEKDDIPHVFDSIAKAID-DL  429 (430)
T ss_dssp             BSSEEEEEES----SSCHHHHHHHHHHHHCEECEECSSSEEEEEGGG-SCGGGHHHHHHHHHHHHH-HH
T ss_pred             ceEEEEeCCC----CCCHHHHHHHHHHhCCEEEecCCCCeEEEEEec-CCHHHHHHHHHHHHHHHH-hc
Confidence            5667888876    2356789999998 8999999877899999764 589999999999999987 54

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=99.92  E-value=6.6e-25  Score=201.09  Aligned_cols=219  Identities=12%  Similarity=0.118  Sum_probs=167.6

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc---------cccc
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM---------LASD  116 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~---------~~~~  116 (306)
                      |++.|+++++.  +++++|+++.++|++|.+ .+.+.+++|.++|++||++||+||+|+++...+..         ..+.
T Consensus       170 d~~~l~~~l~~--~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  246 (437)
T 3g0t_A          170 LREKLESYLQT--GQFCSIIYSNPNNPTWQC-MTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVA  246 (437)
T ss_dssp             HHHHHHHHHTT--TCCCEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGG
T ss_pred             CHHHHHHHHhc--CCceEEEEeCCCCCCCCc-CCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccC
Confidence            78999999943  467788777778999865 57888999999999999999999999975443321         1121


Q ss_pred             c-CCCCCcEEEeccccc-CCcccceeeEeCHHHHh-h-----------------cCCCCccCCCCCCHHHHHHHHHHHHH
Q 021893          117 W-EEVRPDMVILGKALG-GGVIPVSAVLADKEVML-C-----------------IQPGEHGSTFGGNPLASAVAIASLDV  176 (306)
Q Consensus       117 ~-~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~-~-----------------~~~~~~~~~~~~~~~~~~aa~~al~~  176 (306)
                      . .+....+.|+||.++ +|+ |+||+++++++++ .                 +.......+++.+++++.++.++++.
T Consensus       247 ~~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~  325 (437)
T 3g0t_A          247 NYTDNYILALSSSKAFSYAGQ-RIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKA  325 (437)
T ss_dssp             GTCSCEEEEEESTTTTSCGGG-CCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEEcCccCCCCccc-eeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhC
Confidence            1 333344669999999 899 9999999999988 7                 66544555677889999999998887


Q ss_pred             Hh-----hccHHHHHHHHHHHHHHHHHHHHhhCCCceee------EE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCce
Q 021893          177 IR-----DEKLAERSAHLGEELRQHLFKIQQQFPNYVKE------VR-GRGLFNAVEFDKTALPVSAYDICLKMKERGIL  244 (306)
Q Consensus       177 ~~-----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~  244 (306)
                      ..     .++..++++++.+.+++.|++++     ....      .+ ..+.++++.++    ..+..++++.|.++||.
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~L~~~gi~  396 (437)
T 3g0t_A          326 CNDGEYNFRDSVIEYGRKARIMKKMFLDNG-----FNIVYDKDGNEPLADGFYFTVGYK----GMDSSKLIEKFVRYGMC  396 (437)
T ss_dssp             HHTTSCCHHHHHHHHHHHHHHHHHHHHTTT-----EEESSCEETTEECCSSSEEEEEET----TCCHHHHHHHHHHTTEE
T ss_pred             cHhHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CEEeccccCCCCCceeEEEEEecC----CCCHHHHHHHHHHcCeE
Confidence            65     23456777777777777777651     2223      24 67888888876    24678899999999999


Q ss_pred             eccCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          245 AKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       245 ~~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +.++.      .+++|++++. .+++++++++++|+++++
T Consensus       397 v~~~~~~~~~~~~~iRis~~~-~~~e~i~~~~~~l~~~~~  435 (437)
T 3g0t_A          397 AITLKTTGSKRNEAMRICTSL-LPESQFPDLEKRLQMLNA  435 (437)
T ss_dssp             CEESTTTTCCCTTCEEEECSS-SCGGGHHHHHHHHHHHHH
T ss_pred             EeeccccCCCCCCEEEEEEec-CCHHHHHHHHHHHHHHHh
Confidence            98763      2789999874 499999999999998876

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=99.92  E-value=2.1e-24  Score=194.68  Aligned_cols=220  Identities=15%  Similarity=0.119  Sum_probs=161.1

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccccC-----C
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWE-----E  119 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~~-----~  119 (306)
                      |+++|+++++   + ++++++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|... .+...     +
T Consensus       154 d~~~l~~~l~---~-~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~  228 (391)
T 4dq6_A          154 DYEDIENKIK---D-VKLFILCNPHNPVGRV-WTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEK  228 (391)
T ss_dssp             CHHHHHHHCT---T-EEEEEEESSBTTTTBC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHH
T ss_pred             eHHHHHHHhh---c-CCEEEEECCCCCCCcC-cCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccC
Confidence            8999999997   3 8888888889999965 578889999999999999999999999876666422 11111     1


Q ss_pred             CCCcEEEeccccc-CCcccceeeEeCH-HHHhhcCCCC-ccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 021893          120 VRPDMVILGKALG-GGVIPVSAVLADK-EVMLCIQPGE-HGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELR  194 (306)
Q Consensus       120 ~~~d~~s~sK~~~-~G~~~~g~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~  194 (306)
                      ....+.|+||.++ +|+ |+||+++++ ++++.+.... ...+++.+++++.++.++++....  ++..++++++.+.++
T Consensus       229 ~~i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~  307 (391)
T 4dq6_A          229 NTITCMAPTKTFNIAGL-QSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAI  307 (391)
T ss_dssp             TEEEEECSHHHHTCGGG-CCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEEechhhccCccc-ceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Confidence            2234568999998 898 999999875 8877776542 234556788898888888875321  334556666666666


Q ss_pred             HHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC------CCCEEEEeCCCCCCHHHHH
Q 021893          195 QHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT------HDTIVRLTPPLSISSNELQ  267 (306)
Q Consensus       195 ~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~------~~~~lRi~~~~~~t~~~i~  267 (306)
                      +.|++.   ++++....+..+.+.|+.++..  ..+..++++.|.++ ||.+.++      +.+++|++++  +++++++
T Consensus       308 ~~l~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~  380 (391)
T 4dq6_A          308 KYINEN---MPKLKVRKPEGTYLLWVDFSAL--GLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA--CPRSMLE  380 (391)
T ss_dssp             HHHHHH---CTTSEECCCSBSSEEEEECGGG--CCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC--SCHHHHH
T ss_pred             HHHHhh---CCCCEecCCCccEEEEEEhhhc--CCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc--CCHHHHH
Confidence            666653   2223333344556666777641  23678899999999 9999874      3589999965  7899999


Q ss_pred             HHHHHHHHHHh
Q 021893          268 EGSKALHDVLE  278 (306)
Q Consensus       268 ~~~~~l~~~l~  278 (306)
                      +++++|+++++
T Consensus       381 ~~l~~l~~~l~  391 (391)
T 4dq6_A          381 EALIRIKNAIN  391 (391)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHhC
Confidence            99999998763

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.92  E-value=5.8e-24  Score=192.06  Aligned_cols=261  Identities=13%  Similarity=0.131  Sum_probs=176.4

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+|++...+||+....+..........    |..+....+ ..|++.|++++++  .++++|+++.++|++|.+ .+.+.
T Consensus       112 d~vl~~~p~y~~~~~~~~~~g~~~~~v----~~~~~~~~~-~~d~~~l~~~l~~--~~~~~v~l~~p~nptG~~-~~~~~  183 (390)
T 1d2f_A          112 EGVVIHTPAYDAFYKAIEGNQRTVMPV----ALEKQADGW-FCDMGKLEAVLAK--PECKIMLLCSPQNPTGKV-WTCDE  183 (390)
T ss_dssp             CEEEEEESCCHHHHHHHHHTTCEEEEE----ECEECSSSE-ECCHHHHHHHHTS--TTEEEEEEESSCTTTCCC-CCTTH
T ss_pred             CEEEEcCCCcHHHHHHHHHCCCEEEEe----ecccCCCcc-ccCHHHHHHHhcc--CCCeEEEEeCCCCCCCcC-cCHHH
Confidence            578888888887655443322211000    110000000 1489999999974  268888887889999965 57889


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCC---c-EEEeccccc-CCcccceeeEeC-HHHHhhcCCCCc
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRP---D-MVILGKALG-GGVIPVSAVLAD-KEVMLCIQPGEH  156 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~---d-~~s~sK~~~-~G~~~~g~~~~~-~~~~~~~~~~~~  156 (306)
                      +++|.++|++||+++|+||+|+++.+.|..+ .+...+.+   | +.|+||.++ +|+ |+||++++ +++++.+.....
T Consensus       184 l~~l~~~~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~~~d~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~  261 (390)
T 1d2f_A          184 LEIMADLCERHGVRVISDEIHMDMVWGEQPH-IPWSNVARGDWALLTSGSKSFNIPAL-TGAYGIIENSSSRDAYLSALK  261 (390)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTTCBCSSSCC-CCGGGTCCSSEEEEECSHHHHTCGGG-CCEEEEECSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEEccccccccCCCCC-cCHHHcchhhHhhccCccHhhcccCh-hheEEEECCHHHHHHHHHHHh
Confidence            9999999999999999999999876665432 11111221   2 889999998 899 99999985 788777765433


Q ss_pred             -cCCC-CCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHH
Q 021893          157 -GSTF-GGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAY  232 (306)
Q Consensus       157 -~~~~-~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~  232 (306)
                       ..++ +.+++++.++.++++...+  ++..++++++.+.+.+.|++.   +|+.....+..+.++|+.++..  +.+..
T Consensus       262 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~  336 (390)
T 1d2f_A          262 GRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAA---FPELNWQIPQSTYLAWLDLRPL--NIDDN  336 (390)
T ss_dssp             TTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCCSBCSEEEEECGGG--CCCHH
T ss_pred             hhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhh---CCCCEEecCCccEEEEEEcccc--CCCHH
Confidence             3454 6788888888888874211  334556666666676666653   2222222223456667877641  13567


Q ss_pred             HHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          233 DICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       233 ~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ++++.|. ++||.+.++      .++++|++++.  +++++++++++|+++++ ++
T Consensus       337 ~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~-~~  389 (390)
T 1d2f_A          337 ALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC--PRSKLEKGVAGLINAIR-AV  389 (390)
T ss_dssp             HHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHH-HH
T ss_pred             HHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHH-hh
Confidence            8999999 679999874      25799999664  68899999999999987 53

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=99.92  E-value=3.4e-24  Score=194.12  Aligned_cols=261  Identities=11%  Similarity=0.157  Sum_probs=184.2

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCCCHHHHHHHHHhcCC-cEEEEEEccccC
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFGDITALEKIFKESGD-QIAGFLFEPIQG   71 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~d~~~le~~i~~~~~-~~~~v~v~~~~~   71 (306)
                      +|++..|+.++...+..++..+....-...|.++.           ++.+|..|+++|++.++++++ ++++|++++++|
T Consensus       105 ~v~~~~ggt~a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~v~~~~~~n  184 (398)
T 3a2b_A          105 AAILFSTGFQSNLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGHNNMEDLRAKLSRLPEDSAKLICTDGIFS  184 (398)
T ss_dssp             EEEEESSHHHHHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESBCT
T ss_pred             cEEEECCHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCCCCHHHHHHHHHhhccCCceEEEEeCCCC
Confidence            45666666655555544444332222112222211           355667899999999986432 689999999999


Q ss_pred             CCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcc--cccccccccccCCCC--CcEE--EecccccCCcccceeeEeCH
Q 021893           72 EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL--ARSGRMLASDWEEVR--PDMV--ILGKALGGGVIPVSAVLADK  145 (306)
Q Consensus        72 ~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~--~~~g~~~~~~~~~~~--~d~~--s~sK~~~~G~~~~g~~~~~~  145 (306)
                      ++|.+.+    +++|.++|++||+++|+||+|+.+  ++.+..+ .+.++..  +|++  |+||.++. . + ||+++++
T Consensus       185 ptG~~~~----~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~di~~~s~sK~~~~-~-G-G~~~~~~  256 (398)
T 3a2b_A          185 MEGDIVN----LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGT-ASHFGLNDDVDLIMGTFSKSLAS-L-G-GFVAGDA  256 (398)
T ss_dssp             TTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCH-HHHHTCGGGCSEEEEESSSTTCS-S-C-EEEEECH
T ss_pred             CCCCccC----HHHHHHHHHHcCcEEEEECCCcccccCCCCCch-HhhcCCCcCCeEEEecccccccC-C-C-cEEEeCH
Confidence            9998887    999999999999999999999743  3333332 2333332  4665  99999982 1 2 7799999


Q ss_pred             HHHhhcCCCC--ccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE
Q 021893          146 EVMLCIQPGE--HGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF  222 (306)
Q Consensus       146 ~~~~~~~~~~--~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~  222 (306)
                      ++++.+....  ...+...++...+++.++++.... ++..++++++++++.+.|++.+  +. .   .+..|.++++.+
T Consensus       257 ~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~-~---~~~~g~~~~~~~  330 (398)
T 3a2b_A          257 DVIDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDHG--FD-L---GATESPILPIFI  330 (398)
T ss_dssp             HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHTT--CC-B---CSCCSSEEEEEC
T ss_pred             HHHHHHHHhcccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhcC--CC-c---CCCCCCEEEEEc
Confidence            9888776521  233344555555566777876543 4578888899999999988862  21 1   123478888887


Q ss_pred             ecCCChhhHHHHHHHHHHCCceeccCC-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          223 DKTALPVSAYDICLKMKERGILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       223 ~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +.   ..+..++++.|+++||.+.++.       .+++|++++..++++++++++++|+++++ ++.
T Consensus       331 ~~---~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~-~~~  393 (398)
T 3a2b_A          331 RS---NEKTFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFK-QAE  393 (398)
T ss_dssp             CC---HHHHHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHH-HCC
T ss_pred             CC---HHHHHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHH-HhC
Confidence            63   4567889999999999998752       47899998887899999999999999998 653

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=99.92  E-value=9.7e-25  Score=197.61  Aligned_cols=217  Identities=17%  Similarity=0.188  Sum_probs=162.6

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHH------cCCEEEEehhhhcccccccccc--ccc
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK------YNILMIADEIQSGLARSGRMLA--SDW  117 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~------~gi~li~De~~~g~~~~g~~~~--~~~  117 (306)
                      |+++|+++++   +++++|+++.++|++|.+ .+.+.+++|.++|++      ||+++|+||+|+++.+.|..+.  ...
T Consensus       161 d~~~l~~~l~---~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  236 (398)
T 3ele_A          161 DFDALEERIN---AHTRGVIINSPNNPSGTV-YSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKY  236 (398)
T ss_dssp             CHHHHHHTCC---TTEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGT
T ss_pred             CHHHHHHHhC---cCCCEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhh
Confidence            7999999887   478999998889999965 578889999999999      9999999999998866664322  233


Q ss_pred             CCCCCcEEEeccccc-CCcccceeeEeCHHHHh------hcCCCC-ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHH
Q 021893          118 EEVRPDMVILGKALG-GGVIPVSAVLADKEVML------CIQPGE-HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHL  189 (306)
Q Consensus       118 ~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~  189 (306)
                      ++....+.|+||.++ +|+ |+||+++++++++      .+.... ...+++.+.+++.++...++   .....++++++
T Consensus       237 ~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~  312 (398)
T 3ele_A          237 YDNTLVCYSYSKSLSLPGE-RIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQG---ATGDINAYKEN  312 (398)
T ss_dssp             CSSEEEEEESTTTSSCTTT-CCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTT---CCCCHHHHHHH
T ss_pred             cCCeEEEEehhhcCCCccc-eeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhc---CHHHHHHHHHH
Confidence            344445669999999 999 9999999887433      222111 12244556677766665543   33357788899


Q ss_pred             HHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHH
Q 021893          190 GEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNE  265 (306)
Q Consensus       190 ~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~  265 (306)
                      ++++++.|+++.     .....+..+.++|+.++.    .+..++++.|.++||.+.++.    ++++|+++.  +++++
T Consensus       313 ~~~l~~~L~~~g-----~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~--~~~e~  381 (398)
T 3ele_A          313 RDLLYEGLTRIG-----YHCFKPDGAFYMFVKALE----DDSNAFCEKAKEEDVLIVAADGFGCPGWVRISYC--VDREM  381 (398)
T ss_dssp             HHHHHHHHHHHT-----CCEECCSBSSEEEEECSS----SCHHHHHHHHHTTTEECEESGGGTCTTEEEEECC--SCHHH
T ss_pred             HHHHHHHHHHcC-----CeecCCCeeEEEEEEcCC----CCHHHHHHHHHHCCEEEeCccccCCCCeEEEEec--CCHHH
Confidence            999999998872     222333456668887763    357789999999999998863    689999964  79999


Q ss_pred             HHHHHHHHHHHHhhhcC
Q 021893          266 LQEGSKALHDVLELDLP  282 (306)
Q Consensus       266 i~~~~~~l~~~l~~~~~  282 (306)
                      +++++++|+++++ ++.
T Consensus       382 i~~~l~~l~~~l~-~~~  397 (398)
T 3ele_A          382 IKHSMPAFEKIYK-KYN  397 (398)
T ss_dssp             HHHHHHHHHHHHH-HHC
T ss_pred             HHHHHHHHHHHHH-Hhh
Confidence            9999999999998 654

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=99.92  E-value=2.3e-24  Score=195.19  Aligned_cols=227  Identities=14%  Similarity=0.136  Sum_probs=163.3

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-cccccC-----
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWE-----  118 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~~-----  118 (306)
                      .|++.|++.+++  +++++|+++.++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|.. .+...+     
T Consensus       151 ~d~~~l~~~l~~--~~~~~v~~~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~  227 (399)
T 1c7n_A          151 IDFQKLEKLSKD--KNNKALLFCSPHNPVGRV-WKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLA  227 (399)
T ss_dssp             CCHHHHHHHHTC--TTEEEEEEESSBTTTTBC-CCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHH
T ss_pred             EcHHHHHHHhcc--CCCcEEEEcCCCCCCCcC-cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCcccc
Confidence            489999999974  368888888889999965 57899999999999999999999999987665542 222211     


Q ss_pred             CCCCcEEEeccccc-CCcccceeeEeC-HHHHhhcCCCCccCCC-CCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHH
Q 021893          119 EVRPDMVILGKALG-GGVIPVSAVLAD-KEVMLCIQPGEHGSTF-GGNPLASAVAIASLDVIRD--EKLAERSAHLGEEL  193 (306)
Q Consensus       119 ~~~~d~~s~sK~~~-~G~~~~g~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l  193 (306)
                      +....+.|+||.++ +|+ |+||++++ +++++.+.......++ +.+++++.++.++++....  ++..++++++++++
T Consensus       228 ~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l  306 (399)
T 1c7n_A          228 DKTITFTAPSKTFNIAGM-GMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIV  306 (399)
T ss_dssp             TTEEEEECSHHHHTCGGG-CCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEEEeChhhccccch-heEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence            22344568999999 899 99999986 6788877654333333 5688888888888864211  23455666666666


Q ss_pred             HHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHH
Q 021893          194 RQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNEL  266 (306)
Q Consensus       194 ~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i  266 (306)
                      .+.|++.   +|++....+..+.++|+.++..  +.+..++++.|+ ++||.+.|+      ..+++|++++.  +++++
T Consensus       307 ~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~--~~~~l  379 (399)
T 1c7n_A          307 KDFFEVN---HPEIKAPLIEGTYLQWIDFRAL--KMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA--PSSVI  379 (399)
T ss_dssp             HHHHHHH---CTTSBCCCCSBSSEEEEECGGG--CCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS--CHHHH
T ss_pred             HHHHHhh---CCCCeEecCCceEEEEEEcccC--CCCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc--CHHHH
Confidence            6666652   2222222233455667777631  135678999998 689999874      35799999654  48899


Q ss_pred             HHHHHHHHHHHhhhcCC
Q 021893          267 QEGSKALHDVLELDLPK  283 (306)
Q Consensus       267 ~~~~~~l~~~l~~~~~~  283 (306)
                      ++++++|+++++ ++.+
T Consensus       380 ~~~l~~l~~~l~-~~~~  395 (399)
T 1c7n_A          380 QESLERLNKALK-DLKN  395 (399)
T ss_dssp             HHHHHHHHHHHH-HHC-
T ss_pred             HHHHHHHHHHHH-HHHh
Confidence            999999999999 7653

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=99.92  E-value=8.2e-25  Score=197.49  Aligned_cols=219  Identities=17%  Similarity=0.191  Sum_probs=160.9

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC--CCCCc
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE--EVRPD  123 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~--~~~~d  123 (306)
                      |+++|+++++   +++++|++++++|++|.+ .+.+.+++|.++|++||++||+||+|+++...|...++..+  +....
T Consensus       153 d~~~l~~~l~---~~~~~v~~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~  228 (385)
T 1b5p_A          153 DPERVRRAIT---PRTKALVVNSPNNPTGAV-YPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLT  228 (385)
T ss_dssp             CHHHHHTTCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEE
T ss_pred             CHHHHHHhcC---CCCEEEEEeCCCCCCCCC-cCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEE
Confidence            7889988886   468888888889999965 57899999999999999999999999976554421122211  22223


Q ss_pred             EEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHH---Hhh--ccHHHHHHHHHHHHHHHH
Q 021893          124 MVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV---IRD--EKLAERSAHLGEELRQHL  197 (306)
Q Consensus       124 ~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~---~~~--~~~~~~~~~~~~~l~~~L  197 (306)
                      +.|+||.++ +|+ |+||+++++++++.+.......+++.+.+++.++.++++.   ...  ++..++++++++.+.+.|
T Consensus       229 ~~s~SK~~~~~G~-RiG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L  307 (385)
T 1b5p_A          229 VNGAAKAFAMTGW-RIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGL  307 (385)
T ss_dssp             EEESTTTTTCGGG-CCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEechhhcCCccc-ceEEEEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence            458999998 899 9999999999888776544445566788888888877753   222  345677777888888888


Q ss_pred             HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHH
Q 021893          198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKAL  273 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l  273 (306)
                      ++++     .....+..+.++|+.++..  +.+..++++.|.++||.+.|+.    ++++|+++.  ++++++++++++|
T Consensus       308 ~~~g-----~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~--~~~~~i~~~l~~l  378 (385)
T 1b5p_A          308 TALG-----LKAVRPSGAFYVLMDTSPI--APDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA--TSEENLRKALERF  378 (385)
T ss_dssp             HHHT-----CCBCCCSBTTEEEEECTTT--CSSHHHHHHHHHHTTEECEESGGGTCTTEEEEECC--SCHHHHHHHHHHG
T ss_pred             HHCC-----CeecCCCeeEEEEEecCCC--CCCHHHHHHHHHHCCeEEecccccCCCCeEEEEec--CCHHHHHHHHHHH
Confidence            8762     2222344556677766421  2457789999999999998752    579999954  7899999999998


Q ss_pred             HHHHh
Q 021893          274 HDVLE  278 (306)
Q Consensus       274 ~~~l~  278 (306)
                      +++++
T Consensus       379 ~~~l~  383 (385)
T 1b5p_A          379 ARVLG  383 (385)
T ss_dssp             GGGC-
T ss_pred             HHHHh
Confidence            77665

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=99.92  E-value=1.8e-24  Score=194.82  Aligned_cols=218  Identities=20%  Similarity=0.184  Sum_probs=162.6

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccc--cCCCC
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASD--WEEVR  121 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~--~~~~~  121 (306)
                      .|+++|++.++   +++++|++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.. |. .....  ..+..
T Consensus       140 ~d~~~l~~~l~---~~~~~v~~~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~~~~~~  214 (381)
T 1v2d_A          140 LDLSALEKALT---PRTRALLLNTPMNPTGLV-FGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREFAPERT  214 (381)
T ss_dssp             CCHHHHHTTCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHHCTTTE
T ss_pred             cCHHHHHHhcC---cCCEEEEECCCCCCCCCc-cCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHhcCCCE
Confidence            47999998886   468999999999999976 5689999999999999999999999997644 32 11111  34556


Q ss_pred             CcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--h--ccHHHHHHHHHHHHHHH
Q 021893          122 PDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--D--EKLAERSAHLGEELRQH  196 (306)
Q Consensus       122 ~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~--~~~~~~~~~~~~~l~~~  196 (306)
                      +++.|+||.++ +|+ |+||+++++++++.+.......+++.+++.+.++.++++...  +  ++..++++++++++.+.
T Consensus       215 ~~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~  293 (381)
T 1v2d_A          215 FTVGSAGKRLEATGY-RVGWIVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGG  293 (381)
T ss_dssp             EEEEEHHHHTTCGGG-CCEEEECCTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeechhhcCCccc-ceEEEEeCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHH
Confidence            66779999998 898 999999999988877654444567778888888888888652  2  34567777778888888


Q ss_pred             HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC--------CCCEEEEeCCCCCCHHHHHH
Q 021893          197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT--------HDTIVRLTPPLSISSNELQE  268 (306)
Q Consensus       197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------~~~~lRi~~~~~~t~~~i~~  268 (306)
                      |++.+     .....+..|.++++.++.    .+   +.+.|.++||.+.++        ..+++|++++.  +++++++
T Consensus       294 L~~~g-----~~~~~~~~~~~~~~~~~~----~~---~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~--~~~~i~~  359 (381)
T 1v2d_A          294 LRAMG-----LRVYVPEGTYFLMAELPG----WD---AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK--TEEELHL  359 (381)
T ss_dssp             HHHTT-----CCEECCSBSSEEEEECTT----CC---HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS--CHHHHHH
T ss_pred             HHHCC-----CEecCCCcceEEEEecCh----Hh---HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC--CHHHHHH
Confidence            87741     222223346777887764    12   677778999999864        36799999764  8999999


Q ss_pred             HHHHHHHHHhhhcCC
Q 021893          269 GSKALHDVLELDLPK  283 (306)
Q Consensus       269 ~~~~l~~~l~~~~~~  283 (306)
                      ++++|+++++ +.++
T Consensus       360 ~~~~l~~~l~-~~r~  373 (381)
T 1v2d_A          360 ALERLGRVVN-SPRE  373 (381)
T ss_dssp             HHHHHHHHC------
T ss_pred             HHHHHHHHHh-hccc
Confidence            9999999988 6544

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=99.92  E-value=2.1e-23  Score=186.85  Aligned_cols=214  Identities=15%  Similarity=0.087  Sum_probs=161.5

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc--CCEEEEehhhhcccccccccccccCCCCC
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--NILMIADEIQSGLARSGRMLASDWEEVRP  122 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~--gi~li~De~~~g~~~~g~~~~~~~~~~~~  122 (306)
                      .|++.|+++++++  ++++|++++++|++|.+. +.+.+++|.++|++|  |+++|+||+|+++...+........+..+
T Consensus       144 ~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~-~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i  220 (367)
T 3euc_A          144 LDRGAMLAAMAEH--QPAIVYLAYPNNPTGNLF-DAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLL  220 (367)
T ss_dssp             CCHHHHHHHHHHH--CCSEEEEESSCTTTCCCC-CHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEE
T ss_pred             CCHHHHHHHhhcc--CCCEEEEcCCCCCCCCCC-CHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEE
Confidence            3899999999853  578888888899999654 788899999999999  99999999999875443332334444455


Q ss_pred             cEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHH
Q 021893          123 DMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQ  201 (306)
Q Consensus       123 d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~  201 (306)
                      ++.|+||...+|+ |+||+++++++++.+....  .++..+++++.++.++++.... ++..++++++++++.+.|+++ 
T Consensus       221 ~~~s~sK~~~~G~-r~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-  296 (367)
T 3euc_A          221 VMRTVSKLGLAGI-RLGYVAGDPQWLEQLDKVR--PPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAH-  296 (367)
T ss_dssp             EEEECCCTTSCSC-CEEEEEECHHHHHHHGGGC--CSSCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTS-
T ss_pred             EEecchhhccccc-CceeeeeCHHHHHHHHHhC--CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence            6779999944898 9999999999998887533  3566888999988888875211 334555556666666665543 


Q ss_pred             hhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          202 QQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       202 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                         +++. ..+..|.++++.++      +..++.+.|.++||.+.++.      .+++|++++   +++++++++++|++
T Consensus       297 ---~g~~-~~~~~~~~~~~~~~------~~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~---~~~~i~~~~~~l~~  363 (367)
T 3euc_A          297 ---GGVT-VFPSAANFLLARVP------DAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS---TPEENAQFLEAFAA  363 (367)
T ss_dssp             ---TTCE-ECCCSSSEEEEECS------CHHHHHHHHHTTTEECEECGGGCGGGTTEEEEECC---CHHHHHHHHHHHHH
T ss_pred             ---CCcE-ECCCCCeEEEEECC------CHHHHHHHHHHCCeEEEECCccCCCCCCEEEEecC---CHHHHHHHHHHHHH
Confidence               2232 44567778887664      46688999999999998753      589999954   89999999999998


Q ss_pred             HHh
Q 021893          276 VLE  278 (306)
Q Consensus       276 ~l~  278 (306)
                      +++
T Consensus       364 ~l~  366 (367)
T 3euc_A          364 SLQ  366 (367)
T ss_dssp             HTC
T ss_pred             Hhc
Confidence            875

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=99.92  E-value=1.7e-24  Score=198.18  Aligned_cols=224  Identities=12%  Similarity=0.112  Sum_probs=164.2

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~~~~~~d~  124 (306)
                      |++.|++.++   ++++++++++++|++|.. .+++.+++|.++|++||+++|+||+|+++++.|..+ .....+..+++
T Consensus       180 d~~~l~~~l~---~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~v  255 (427)
T 3dyd_A          180 DLKQLEYLID---EKTACLIVNNPSNPCGSV-FSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPI  255 (427)
T ss_dssp             CHHHHHSSCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCE
T ss_pred             CHHHHHHHhc---cCCCEEEEECCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcE
Confidence            7899998887   468888888889999965 589999999999999999999999999987766533 23333344444


Q ss_pred             E---Eeccccc-CCcccceeeEeC-------HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHH
Q 021893          125 V---ILGKALG-GGVIPVSAVLAD-------KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLG  190 (306)
Q Consensus       125 ~---s~sK~~~-~G~~~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~  190 (306)
                      +   |+||.++ +|+ |+||++++       +++++.+..... .+++.+++++.++.++++....   ++..+++++++
T Consensus       256 i~~~S~sK~~~~~G~-riG~~~~~~~~~~~~~~i~~~l~~~~~-~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~  333 (427)
T 3dyd_A          256 LSCGGLAKRWLVPGW-RLGWILIHDRRDIFGNEIRDGLVKLSQ-RILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNA  333 (427)
T ss_dssp             EEEEESTTTSSCGGG-CCEEEEEECSTTSSHHHHHHHHHHHHH-HHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred             EEEeeccccCCCcCc-ceEEEEecCcchhhHHHHHHHHHHHHh-ccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence            4   9999986 799 99999986       466665543221 2567788999998888874222   33455666666


Q ss_pred             HHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC--ChhhHHHHHHHHH-HCCceeccC----CCCEEEEeCCCCCCH
Q 021893          191 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA--LPVSAYDICLKMK-ERGILAKPT----HDTIVRLTPPLSISS  263 (306)
Q Consensus       191 ~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~~~~~~~~l~-~~Gi~~~~~----~~~~lRi~~~~~~t~  263 (306)
                      +.+.+.|+++    +++....+..|+++++.++...  ...+..++++.|+ ++||++.|+    .++++|+++  .+++
T Consensus       334 ~~l~~~L~~~----~g~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~--~~~~  407 (427)
T 3dyd_A          334 DLCYGALAAI----PGLRPVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVI--TVPE  407 (427)
T ss_dssp             HHHHHHHHHS----TTEEEECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEES--CSCH
T ss_pred             HHHHHHHhcC----CCceecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEE--CCCH
Confidence            6666666653    3333334556778887776311  1135678888886 789999875    368999995  4799


Q ss_pred             HHHHHHHHHHHHHHhhhcC
Q 021893          264 NELQEGSKALHDVLELDLP  282 (306)
Q Consensus       264 ~~i~~~~~~l~~~l~~~~~  282 (306)
                      +++++++++|+++++ ++.
T Consensus       408 e~i~~~l~~l~~~l~-~~~  425 (427)
T 3dyd_A          408 VMMLEACSRIQEFCE-QHY  425 (427)
T ss_dssp             HHHHHHHHHHHHHHH-HHC
T ss_pred             HHHHHHHHHHHHHHH-Hhh
Confidence            999999999999998 654

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.92  E-value=4.6e-25  Score=199.42  Aligned_cols=215  Identities=16%  Similarity=0.187  Sum_probs=163.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccccc----CCCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW----EEVR  121 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~----~~~~  121 (306)
                      |+++|+++++   +++++|++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++...|...+...    .+..
T Consensus       163 d~~~l~~~l~---~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~  238 (389)
T 1o4s_A          163 SLEEVEGLLV---GKTKAVLINSPNNPTGVV-YRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRI  238 (389)
T ss_dssp             CHHHHHHTCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTE
T ss_pred             CHHHHHHhcc---cCceEEEEcCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcE
Confidence            7899999887   468888888889999965 5789999999999999999999999997755543222211    2333


Q ss_pred             CcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Q 021893          122 PDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKI  200 (306)
Q Consensus       122 ~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~  200 (306)
                      ..+.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++.. .+++.++++++++++.+.|+++
T Consensus       239 i~~~s~sK~~~~~G~-r~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~l~~~L~~~  316 (389)
T 1o4s_A          239 VYINGFSKSHSMTGW-RVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVD-NSYMVQTFKERKNFVVERLKKM  316 (389)
T ss_dssp             EEEEESTTTTTCGGG-CCEEEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEeechhhcCCccc-ceEEEEeCHHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHhc
Confidence            34568999998 898 99999999999888766444456677888888777776532 3456778888888888888876


Q ss_pred             HhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          201 QQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       201 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      .  +   ....+..|.++++.++     .+..++++.|+ ++||.+.++.    ++++|++++  .+++++++++++|++
T Consensus       317 g--~---~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~--~~~~~l~~~l~~l~~  384 (389)
T 1o4s_A          317 G--V---KFVEPEGAFYLFFKVR-----GDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFA--TSIERLTEALDRIED  384 (389)
T ss_dssp             T--C---CCCCCSBSSEEEEECS-----SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC--SCHHHHHHHHHHHHH
T ss_pred             C--C---eeecCCcceEEEEeCC-----CCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEe--CCHHHHHHHHHHHHH
Confidence            2  2   1122335667777664     24678999998 8899998752    579999976  489999999999998


Q ss_pred             HHh
Q 021893          276 VLE  278 (306)
Q Consensus       276 ~l~  278 (306)
                      +++
T Consensus       385 ~l~  387 (389)
T 1o4s_A          385 FLN  387 (389)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            886

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=99.92  E-value=1.3e-24  Score=196.14  Aligned_cols=222  Identities=15%  Similarity=0.168  Sum_probs=164.1

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc----cccc--CC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML----ASDW--EE  119 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~----~~~~--~~  119 (306)
                      |++.|++.++   +++++|++++++|++|.+ .+++.+++|.++|++||+++|+||+|+++.+.|..+    .+..  .+
T Consensus       152 d~~~l~~~l~---~~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  227 (388)
T 1j32_A          152 SPEQIRQAIT---PKTKLLVFNTPSNPTGMV-YTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYE  227 (388)
T ss_dssp             CHHHHHHHCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHH
T ss_pred             CHHHHHHhcC---cCceEEEEeCCCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccC
Confidence            7999999987   468889988889999966 478999999999999999999999999876555321    1111  23


Q ss_pred             CCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHH
Q 021893          120 VRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQH  196 (306)
Q Consensus       120 ~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~  196 (306)
                      ..+++.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++....  ++..++++++++++.+.
T Consensus       228 ~~~~~~s~sK~~~~~G~-r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  306 (388)
T 1j32_A          228 RSVVCSGFAKTYAMTGW-RVGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDA  306 (388)
T ss_dssp             TEEEEEESTTTTTCTTT-CCEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEeechhccCCccc-ceEEEEeCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHH
Confidence            4556779999998 899 9999999999988876554556677788888888877763211  23455666677777777


Q ss_pred             HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH-CCceeccCC----CCEEEEeCCCCCCHHHHHHHHH
Q 021893          197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPTH----DTIVRLTPPLSISSNELQEGSK  271 (306)
Q Consensus       197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~  271 (306)
                      |+++    ++.....+..+.++++.++..  +.+..++++.|++ +||.+.++.    ++++|++++  +++++++++++
T Consensus       307 L~~~----~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~--~~~~~i~~~~~  378 (388)
T 1j32_A          307 LNAM----PGLECPKPDGAFYMFPSIAKT--GRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA--TDLDTIKRGME  378 (388)
T ss_dssp             HHTC----TTCBCCCCCBTTEECCBCGGG--TCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC--SCHHHHHHHHH
T ss_pred             HhhC----CCCcccCCCeeEEEEEecCCC--CCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec--CCHHHHHHHHH
Confidence            6653    222222233456666655421  1356789999986 699998752    689999964  78999999999


Q ss_pred             HHHHHHhhhc
Q 021893          272 ALHDVLELDL  281 (306)
Q Consensus       272 ~l~~~l~~~~  281 (306)
                      +|+++++ ++
T Consensus       379 ~l~~~l~-~~  387 (388)
T 1j32_A          379 RLEKFLH-GI  387 (388)
T ss_dssp             HHHHHHH-HH
T ss_pred             HHHHHHH-Hh
Confidence            9999987 53

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=99.92  E-value=7.1e-25  Score=199.53  Aligned_cols=221  Identities=16%  Similarity=0.186  Sum_probs=164.5

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc-ccccc----CC
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDW----EE  119 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~----~~  119 (306)
                      .|++.|+++++   +++++|++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|.. .++..    .+
T Consensus       148 ~d~~~l~~~l~---~~~~~v~l~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~  223 (411)
T 2o0r_A          148 LDADALRRAVT---PRTRALIINSPHNPTGAV-LSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAE  223 (411)
T ss_dssp             CCHHHHHHHCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGG
T ss_pred             CCHHHHHHhhc---cCceEEEEeCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCC
Confidence            48999999987   478899988899999965 57899999999999999999999999987665532 12211    23


Q ss_pred             CCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHH
Q 021893          120 VRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQH  196 (306)
Q Consensus       120 ~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~  196 (306)
                      ..+.+.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++....  ++..++++++++++.+.
T Consensus       224 ~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  302 (411)
T 2o0r_A          224 RTITISSAAKMFNCTGW-KIGWACGPAELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAG  302 (411)
T ss_dssp             GEEEEEEHHHHTTCTTT-CEEEEECCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEeechhhcCCccc-eEEEEeeCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence            3445669999998 898 9999999999988776544444566677777887788765321  34567777788888888


Q ss_pred             HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC-----------------CCCEEEEeCC
Q 021893          197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT-----------------HDTIVRLTPP  258 (306)
Q Consensus       197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-----------------~~~~lRi~~~  258 (306)
                      |++..     +....+..|.++++.++... ..+..++++.|+ ++||.+.++                 +.+++|+++.
T Consensus       303 L~~~g-----~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~  376 (411)
T 2o0r_A          303 LTEIG-----FAVHDSYGTYFLCADPRPLG-YDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC  376 (411)
T ss_dssp             HHHHT-----CEECCCCBSSEEEEECGGGT-CCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECC
T ss_pred             HHHcC-----CEecCCCeeEEEEEecCCCC-CCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEec
Confidence            87762     22223445778888876410 124678888887 579998763                 2468999964


Q ss_pred             CCCCHHHHHHHHHHHHHHHh
Q 021893          259 LSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       259 ~~~t~~~i~~~~~~l~~~l~  278 (306)
                        .+++++++++++|+++++
T Consensus       377 --~~~e~i~~~~~~l~~~~~  394 (411)
T 2o0r_A          377 --KRDDTLDEAIRRLSVLAE  394 (411)
T ss_dssp             --SCHHHHHHHHHHHGGGGC
T ss_pred             --CCHHHHHHHHHHHHHHHh
Confidence              589999999999988777

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=99.92  E-value=1.7e-24  Score=195.77  Aligned_cols=251  Identities=13%  Similarity=0.034  Sum_probs=172.2

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+|++...+||+....+..........    |.... . + ..|++.|++++++   +++++++++++|++|.+ .+.+.
T Consensus       121 d~vl~~~p~~~~~~~~~~~~g~~~~~v----~~~~~-g-~-~~d~~~l~~~~~~---~~~~v~l~~p~nptG~~-~~~~~  189 (396)
T 3jtx_A          121 PAIVSPNPFYQIYEGATLLGGGEIHFA----NCPAP-S-F-NPDWRSISEEVWK---RTKLVFVCSPNNPSGSV-LDLDG  189 (396)
T ss_dssp             CEEEEEESCCHHHHHHHHHTTCEEEEE----ECCTT-T-C-CCCGGGSCHHHHH---TEEEEEEESSCTTTCCC-CCHHH
T ss_pred             CEEEEcCCCcHhHHHHHHHcCCEEEEe----ecCCC-C-C-ccCHHHHHHhhcc---CcEEEEEECCCCCCCCc-CCHHH
Confidence            467777777776554433332211110    11000 0 0 1278899999984   68888888889999965 46888


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhcccccc-cccccc--------cCCCCCcEEEeccccc-CCcccceeeEeCHHHHhhcC
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSG-RMLASD--------WEEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQ  152 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g-~~~~~~--------~~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~  152 (306)
                      +++|.++|++||+++|+||+|+++.+.+ ..+...        ..+..+++.|+||.++ +|+ |+||+++++++++.+.
T Consensus       190 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~  268 (396)
T 3jtx_A          190 WKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGL-RSGFVAGDAELLKNFL  268 (396)
T ss_dssp             HHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGG-CCEEEEECHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCccc-ceEEEEeCHHHHHHHH
Confidence            9999999999999999999999876666 332211        1344556779999987 899 9999999999998887


Q ss_pred             CCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhH
Q 021893          153 PGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSA  231 (306)
Q Consensus       153 ~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~  231 (306)
                      ......+++.+++++.++.++++.... ++..++++++.+.+.+.|++.   .   ....+..|.++|+.++.    .+.
T Consensus       269 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~---~---~~~~~~~~~~~~~~~~~----~~~  338 (396)
T 3jtx_A          269 LYRTYHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQV---F---DVKLPDASFYIWLKVPD----GDD  338 (396)
T ss_dssp             HHHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTT---S---CCCCCSSSSEEEEECTT----SCH
T ss_pred             HHHhhcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc---C---CccCCCeeEEEEEECCC----CCH
Confidence            655556677889999988888763110 223344444444444444432   1   11234457788888763    356


Q ss_pred             HHHHHHHHH-CCceeccC------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          232 YDICLKMKE-RGILAKPT------------HDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       232 ~~~~~~l~~-~Gi~~~~~------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      .++++.|++ +||.+.|+            +.+++|++++  .+++++++++++|++++
T Consensus       339 ~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l  395 (396)
T 3jtx_A          339 LAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALV--ADVATCVKAAEDIVSLY  395 (396)
T ss_dssp             HHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECC--SCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence            788888864 59999763            3589999965  49999999999998875

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=99.92  E-value=5.5e-25  Score=197.65  Aligned_cols=208  Identities=13%  Similarity=0.047  Sum_probs=155.6

Q ss_pred             HHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccc---------cCC
Q 021893           49 ALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD---------WEE  119 (306)
Q Consensus        49 ~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~---------~~~  119 (306)
                      ++++.+..   ++++++++.++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.+...+..         ..+
T Consensus       146 ~l~~~~~~---~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (376)
T 3ezs_A          146 SLNEKELQ---EVDLVILNSPNNPTGRT-LSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFK  221 (376)
T ss_dssp             CCCHHHHH---HCSEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCT
T ss_pred             hHHhhhcc---CCCEEEEcCCCCCcCCC-CCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccC
Confidence            56666763   57788888889999965 578889999999999999999999999876665433221         234


Q ss_pred             CCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHH
Q 021893          120 VRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHL  197 (306)
Q Consensus       120 ~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L  197 (306)
                      ..+.+.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++.... ++..++++++.+.+.+.|
T Consensus       222 ~~i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l  300 (376)
T 3ezs_A          222 NVLVIHSLSKRSSAPGL-RSGFIAGDSRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIF  300 (376)
T ss_dssp             TEEEEEESTTTTTCGGG-CCEEEEECHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHS
T ss_pred             cEEEEecchhccCCccc-eeEEEeeCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHh
Confidence            4556779999997 899 9999999999998887655566778889999888888864111 223344444444444444


Q ss_pred             HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHH-CCceeccC--------CCCEEEEeCCCCCCHHHHHH
Q 021893          198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPT--------HDTIVRLTPPLSISSNELQE  268 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~--------~~~~lRi~~~~~~t~~~i~~  268 (306)
                      +    .   +.  .+..|.++++.++      +..++++.|++ +||.+.|+        ..+++|++++  .+++++++
T Consensus       301 ~----~---~~--~~~~~~~~~~~~~------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~--~~~~~i~~  363 (376)
T 3ezs_A          301 K----N---TL--IYPYSFYVYLPVQ------NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALV--YDTPLLEK  363 (376)
T ss_dssp             T----T---CC--CCSBSSEEEEECS------CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECC--SCHHHHHH
T ss_pred             c----C---CC--CCCcceEEEEECC------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEc--CCHHHHHH
Confidence            3    1   22  4567888888765      35688999988 89999863        4689999965  49999999


Q ss_pred             HHHHHHHHHh
Q 021893          269 GSKALHDVLE  278 (306)
Q Consensus       269 ~~~~l~~~l~  278 (306)
                      ++++|+++++
T Consensus       364 ~l~~l~~~l~  373 (376)
T 3ezs_A          364 PLEIIETYRE  373 (376)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHHH
Confidence            9999999987

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=99.92  E-value=5.3e-24  Score=190.44  Aligned_cols=210  Identities=15%  Similarity=0.134  Sum_probs=153.9

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccCCCC---
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEEVR---  121 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~~~~---  121 (306)
                      |+++|++.++   +++++|++++++|++|.+.+ .+.+.+|++.|++ |+++|+||+|+++.+ +..... ......   
T Consensus       144 d~~~l~~~i~---~~~~~v~~~~p~nptG~~~~-~~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~  217 (363)
T 3ffh_A          144 DLEGMLNAID---EKTTIVWICNPNNPTGNYIE-LADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNL  217 (363)
T ss_dssp             CHHHHHHHCC---TTEEEEEEESSCTTTCCCCC-HHHHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTE
T ss_pred             CHHHHHHhcc---cCCCEEEEeCCCCCcCCCcC-HHHHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCE
Confidence            8999999987   57999999999999997764 5555555555555 999999999998765 433222 111111   


Q ss_pred             CcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHH
Q 021893          122 PDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFK  199 (306)
Q Consensus       122 ~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~  199 (306)
                      ..+.|+||.++ +|+ |+||+++++++++.+.....  +++.+.+++.++.++++.... ++..++++++.+++.+.|++
T Consensus       218 i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~  294 (363)
T 3ffh_A          218 IITRTFSKIYGLASA-RVGYGIADKEIIRQLNIVRP--PFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKR  294 (363)
T ss_dssp             EEEEESSSTTCCSSC-CCEEEEECHHHHHHHHHTCC--SCCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeechhhhcCchh-ceeeeecCHHHHHHHHHhCC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            12568999998 899 99999999999888775433  677889999999888863311 33455666666666666665


Q ss_pred             HHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          200 IQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       200 ~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      .    ++. ...+..|.++++.++.     +..++.+.|.++||.+.++.    ++++|++++   +++++++++++|++
T Consensus       295 ~----~g~-~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~i~~~~~~l~~  361 (363)
T 3ffh_A          295 F----EKV-KLYPANGNFVLIDLGI-----EAGTIFSYLEKNGYITRSGAALGFPTAVRITIG---KEEDNSAVIALLEK  361 (363)
T ss_dssp             C----TTC-EECCCCSSEEEEECSS-----CHHHHHHHHHHTTEECEETTTTTCTTEEEEECC---CHHHHHHHHHHHHH
T ss_pred             C----CCc-eECCCCCeEEEEECCC-----CHHHHHHHHHHCCeEEEeCccCCCCCeEEEECC---CHHHHHHHHHHHHH
Confidence            2    122 2335567788887752     56789999999999999853    689999954   89999999999987


Q ss_pred             HH
Q 021893          276 VL  277 (306)
Q Consensus       276 ~l  277 (306)
                      ++
T Consensus       362 ~l  363 (363)
T 3ffh_A          362 LL  363 (363)
T ss_dssp             HC
T ss_pred             hC
Confidence            63

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=99.91  E-value=1.4e-24  Score=195.90  Aligned_cols=218  Identities=16%  Similarity=0.153  Sum_probs=160.8

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc----ccc-cCC
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML----ASD-WEE  119 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~----~~~-~~~  119 (306)
                      .|+++|++.++   +++++|++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|...    ..+ ..+
T Consensus       151 ~d~~~l~~~l~---~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~  226 (386)
T 1u08_A          151 VDWQEFAALLS---ERTRLVILNTPHNPSATV-WQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRE  226 (386)
T ss_dssp             CCHHHHHHHCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHT
T ss_pred             CCHHHHHHhhc---ccCEEEEEeCCCCCCCcc-CCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccC
Confidence            47999999886   578999998889999965 578899999999999999999999999876555321    111 234


Q ss_pred             CCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHH
Q 021893          120 VRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQH  196 (306)
Q Consensus       120 ~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~  196 (306)
                      ..+.+.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++....  ++..++++++++++.+.
T Consensus       227 ~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~  305 (386)
T 1u08_A          227 RAVAVSSFGKTYHMTGW-KVGYCVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNA  305 (386)
T ss_dssp             TEEEEEEHHHHTTCGGG-CCEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHH
T ss_pred             cEEEEecchhhcCCccc-ceEEEEcCHHHHHHHHHHHHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHH
Confidence            4555679999999 899 9999999999988877544445677788888888888875311  33556666666666666


Q ss_pred             HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC--------CCCEEEEeCCCCCCHHHHH
Q 021893          197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT--------HDTIVRLTPPLSISSNELQ  267 (306)
Q Consensus       197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~--------~~~~lRi~~~~~~t~~~i~  267 (306)
                      |++.     ++....+..|.++++.++... ..+..++++.|+ ++||.+.|+        ..+++|++++  .++++|+
T Consensus       306 L~~~-----g~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~--~~~~~i~  377 (386)
T 1u08_A          306 LNES-----RLEILPCEGTYFLLVDYSAVS-TLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFA--KKESTLL  377 (386)
T ss_dssp             TTSS-----SCEECCCCBSSEEEEECTTTC-CSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECC--SCHHHHH
T ss_pred             HHHC-----CCeecCCCceEEEEEecCCCC-CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEc--CCHHHHH
Confidence            6553     122223345778888876410 035678888887 679999864        3579999965  5899999


Q ss_pred             HHHHHHHH
Q 021893          268 EGSKALHD  275 (306)
Q Consensus       268 ~~~~~l~~  275 (306)
                      +++++|++
T Consensus       378 ~~~~~l~~  385 (386)
T 1u08_A          378 AAAERLRQ  385 (386)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHHhh
Confidence            99998864

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=99.91  E-value=8.5e-24  Score=188.35  Aligned_cols=213  Identities=16%  Similarity=0.125  Sum_probs=161.8

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc----cccC-CC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA----SDWE-EV  120 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~----~~~~-~~  120 (306)
                      |++.|++.++++ +++++|++++++|++|.+. +.+.+++|+++| +||+++|+||+|+++...+....    .+.. +.
T Consensus       128 d~~~l~~~l~~~-~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  204 (354)
T 3ly1_A          128 DIEGLKAAVAAY-SGPSIVYLVNPNNPTGTIT-PADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAEN  204 (354)
T ss_dssp             CHHHHHHHHHTC-SSCEEEEEESSCTTTCCCC-CHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSS
T ss_pred             CHHHHHHHhccC-CCCCEEEEeCCCCCcCCCc-CHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCC
Confidence            899999999853 4688888888899999765 566677777777 79999999999998765553211    1222 33


Q ss_pred             CCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHH
Q 021893          121 RPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLF  198 (306)
Q Consensus       121 ~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~  198 (306)
                      ...+.|+||.++ +|+ |+||+++++++++.+......  ++.+++++.++.++++.... ++..++++++.+++++.|+
T Consensus       205 ~i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~  281 (354)
T 3ly1_A          205 IILLKTFSKIHAMAGM-RVGYAVAHPTVIALMGRYVAG--EKINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALE  281 (354)
T ss_dssp             EEEEEESSSTTCCGGG-CCEEEECCHHHHHHHGGGTTC--SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeeChhhccChhh-hheeeecCHHHHHHHHHhcCC--CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345669999998 899 999999999999888764333  67888988888888764421 3456777778888888887


Q ss_pred             HHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec---cCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          199 KIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK---PTHDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       199 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~---~~~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      +..  +   . ..+..|.++++.++.     +..++.+.|.++||.+.   ....+++|++++   +++++++++++|++
T Consensus       282 ~~~--~---~-~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~v~g~~~~~~~~iRis~~---~~~~i~~~~~~l~~  347 (354)
T 3ly1_A          282 DLK--L---P-YLPSEGNFVFHQLVV-----PLKDYQTHMADAGVLIGRAFPPADNWCRISLG---TPQEMQWVADTMRE  347 (354)
T ss_dssp             HHT--C---C-BCCCCSSEEEEECSS-----CHHHHHHHHHHTTEECCCCCTTCTTEEEEECC---CHHHHHHHHHHHHH
T ss_pred             HCC--C---e-ECCCCceEEEEECCC-----CHHHHHHHHHHCCEEEeecCCCCCCEEEEEcC---CHHHHHHHHHHHHH
Confidence            762  2   1 224567788887763     56789999999999987   124689999943   79999999999999


Q ss_pred             HHh
Q 021893          276 VLE  278 (306)
Q Consensus       276 ~l~  278 (306)
                      +++
T Consensus       348 ~l~  350 (354)
T 3ly1_A          348 FRK  350 (354)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            987

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=99.91  E-value=7.7e-23  Score=183.44  Aligned_cols=246  Identities=13%  Similarity=0.053  Sum_probs=177.9

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+|++...+||+....+..........    |...+   . ..|++.|++.++++  ++++|++++++|++|.+.+   
T Consensus       116 gd~Vl~~~~~y~~~~~~~~~~g~~~~~v----~~~~~---~-~~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~---  182 (369)
T 3cq5_A          116 GRTALGFQPSYSMHPILAKGTHTEFIAV----SRGAD---F-RIDMDVALEEIRAK--QPDIVFVTTPNNPTGDVTS---  182 (369)
T ss_dssp             TCEEEEEESSCTHHHHHHHHTTCEEEEE----ECCTT---S-SCCHHHHHHHHHHH--CCSEEEEESSCTTTCCCCC---
T ss_pred             CCEEEEcCCChHHHHHHHHHcCCEEEEe----cCCcC---C-CCCHHHHHHHhhcc--CCCEEEEeCCCCCCCCCCC---
Confidence            3578888888887655443332211110    11100   0 23799999999852  5778888999999998887   


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccCC-CCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEE-VRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGS  158 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~~-~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~  158 (306)
                       ++++.++|+.+++++|+||+|+++......+.. +.++ ..+++.|+||.++ +|+ |+||+++++++++.+....  .
T Consensus       183 -~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~l~~~~--~  258 (369)
T 3cq5_A          183 -LDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGG-RLGYFVANPAFIDAVMLVR--L  258 (369)
T ss_dssp             -HHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGG-CCEEEEECTHHHHHHHTTS--C
T ss_pred             -HHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCccc-ceEEEEeCHHHHHHHHHcC--C
Confidence             788888888888999999999977543222221 2233 3456779999998 898 9999999999988887533  3


Q ss_pred             CCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHH
Q 021893          159 TFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLK  237 (306)
Q Consensus       159 ~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~  237 (306)
                      +++.+++++.++.++++... -++..++++++++++.+.|++.+     .. ..+..|.++++.++     .+..++.+.
T Consensus       259 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~-~~~~~~~~~~~~~~-----~~~~~l~~~  327 (369)
T 3cq5_A          259 PYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEELG-----YA-VVPSESNFVFFGDF-----SDQHAAWQA  327 (369)
T ss_dssp             TTCSCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHHT-----CE-EECCSSSEEEEECC-----SSHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCC-----CE-ECCCCCeEEEEECC-----CCHHHHHHH
Confidence            45678888888888887532 14467778888888888887742     22 23556778888664     246789999


Q ss_pred             HHHCCceeccCC-CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          238 MKERGILAKPTH-DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       238 l~~~Gi~~~~~~-~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      |.++||.+.+++ ++++|++++   ++++++.++++|+++++
T Consensus       328 l~~~gi~v~~~~~~~~iRis~~---~~~~i~~~~~~l~~~~~  366 (369)
T 3cq5_A          328 FLDRGVLIRDVGIAGHLRTTIG---VPEENDAFLDAAAEIIK  366 (369)
T ss_dssp             HHHTTEECBCCSCTTEEEEECC---CHHHHHHHHHHHHHHHT
T ss_pred             HHHCCEEEEECCCCCeEEEEeC---CHHHHHHHHHHHHHHHh
Confidence            999999999863 679999965   78999999999998876

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=99.91  E-value=3.9e-24  Score=194.29  Aligned_cols=218  Identities=16%  Similarity=0.205  Sum_probs=160.4

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-ccccC----CC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDWE----EV  120 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~~----~~  120 (306)
                      |+++|++.++   +++++|++++++|++|.+. +++.+++|.++|++||+++|+||+|+++.+.|..+ ++...    +.
T Consensus       156 d~~~l~~~~~---~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  231 (410)
T 3e2y_A          156 DPRELESKFS---SKTKAIILNTPHNPLGKVY-TRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWER  231 (410)
T ss_dssp             CHHHHHTTCC---TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGG
T ss_pred             CHHHHHhhcC---CCceEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCe
Confidence            7899998886   5799999999999999654 78889999999999999999999999887666422 22222    22


Q ss_pred             CCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHH-----hh----ccHHHHHHHHH
Q 021893          121 RPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVI-----RD----EKLAERSAHLG  190 (306)
Q Consensus       121 ~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~-----~~----~~~~~~~~~~~  190 (306)
                      ..++.|+||.++ +|+ |+||+++++++++.+.......+++.+++++.++.++++..     ..    ++..+++++++
T Consensus       232 ~i~~~S~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  310 (410)
T 3e2y_A          232 TITIGSAGKTFSVTGW-KLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKR  310 (410)
T ss_dssp             EEEEEEHHHHSSCGGG-CCEEEECCHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHH
T ss_pred             EEEEecchhhcCCCCc-eEEEEEECHHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHH
Confidence            244568999999 899 99999999999988876556667888999999988888741     11    22445555566


Q ss_pred             HHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCCh--------hhHHHHHHHHH-HCCceeccC-----------CC
Q 021893          191 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP--------VSAYDICLKMK-ERGILAKPT-----------HD  250 (306)
Q Consensus       191 ~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~--------~~~~~~~~~l~-~~Gi~~~~~-----------~~  250 (306)
                      +.+.+.|++.     +.....+..|.++++.+......        ....++++.++ ++||.+.|+           +.
T Consensus       311 ~~l~~~L~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~  385 (410)
T 3e2y_A          311 DRMVRLLNSV-----GLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFE  385 (410)
T ss_dssp             HHHHHHHHTT-----TCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHT
T ss_pred             HHHHHHHHHC-----CCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCC
Confidence            6666666554     24444566788888887642211        12347777665 669998864           14


Q ss_pred             CEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          251 TIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       251 ~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      +++|++  +..+++++++++++|++
T Consensus       386 ~~iRis--~~~~~e~l~~~l~~l~~  408 (410)
T 3e2y_A          386 KLVRFC--FIKKDSTLDAAEEIFRA  408 (410)
T ss_dssp             TEEEEE--CCCCHHHHHHHHHHHHT
T ss_pred             CEEEEE--EcCCHHHHHHHHHHHHh
Confidence            799999  45699999999999875

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=99.91  E-value=1.4e-23  Score=189.09  Aligned_cols=244  Identities=19%  Similarity=0.229  Sum_probs=178.2

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHH
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYL   83 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l   83 (306)
                      ++|++...+|+.+..+....+-            .++.+|+.|+++|++.+++++++++++++++++|++|.+.+    +
T Consensus       124 d~v~~~~~~~~~~~~~~~~~g~------------~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~----l  187 (384)
T 1bs0_A          124 DRIAADRLSHASLLEAASLSPS------------QLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAP----L  187 (384)
T ss_dssp             CEEEEETTCCHHHHHHHHTSSS------------EEEEECTTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCC----H
T ss_pred             cEEEEcccccHHHHHHHHHcCC------------CEEEeCCCCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccC----H
Confidence            3455556666655444333321            13456678999999999875445899999999999999887    9


Q ss_pred             HHHHHHHHHcCCEEEEehhhh-cc-cccccccccccCCCCCcEE--EecccccCCcccceeeEeCHHHHhhcCCCC--cc
Q 021893           84 KAVRDLCSKYNILMIADEIQS-GL-ARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGE--HG  157 (306)
Q Consensus        84 ~~i~~l~~~~gi~li~De~~~-g~-~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~--~~  157 (306)
                      ++|.++|++||+++|+||+|+ ++ ++.|..+ .+.++..+|++  |+||.++  . +.||+++++++++.+....  ..
T Consensus       188 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~di~~~s~sK~~~--~-~GG~~~~~~~~~~~l~~~~~~~~  263 (384)
T 1bs0_A          188 AEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGS-CWLQKVKPELLVVTFGKGFG--V-SGAAVLCSSTVADYLLQFARHLI  263 (384)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTTTTSSGGGCCH-HHHTTCCCSEEEEESSSTTS--S-CCEEEEECHHHHHHHHHHCHHHH
T ss_pred             HHHHHHHHHcCcEEEEECCcccceecCCCCch-HHhcCCCCcEEEeeccchhh--c-cCcEEEeCHHHHHHHHHhchhhh
Confidence            999999999999999999997 43 3344433 23444567776  9999998  2 3388999999888776421  22


Q ss_pred             CCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHH
Q 021893          158 STFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDI  234 (306)
Q Consensus       158 ~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~  234 (306)
                      .+...+++.++++.++++.+.+   ++..++++++++++.+.|++..     ... .+..+.++++.++.   ..+..++
T Consensus       264 ~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~-~~~~~~~~~~~~~~---~~~~~~l  334 (384)
T 1bs0_A          264 YSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLP-----FTL-ADSCSAIQPLIVGD---NSRALQL  334 (384)
T ss_dssp             SSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSS-----CEE-CSCCSSBCCEEEES---HHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcC-----Ccc-cCCCCCEEEEEeCC---HHHHHHH
Confidence            2335788888888888888763   3567777888888888777652     211 12567777887763   4567789


Q ss_pred             HHHHHHCCceeccCC-------CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          235 CLKMKERGILAKPTH-------DTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       235 ~~~l~~~Gi~~~~~~-------~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      .+.|.++||.+.++.       .+++|++++..++++++++++++|+++
T Consensus       335 ~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~  383 (384)
T 1bs0_A          335 AEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  383 (384)
T ss_dssp             HHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence            999999999998742       378999998888999999999999864

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=99.91  E-value=5.4e-23  Score=185.02  Aligned_cols=220  Identities=14%  Similarity=0.119  Sum_probs=167.5

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|+++|++++++. +++++|++++++|++|.+.+    +++|.++|++||+++|+||+|+.+..   .+....+  ..|+
T Consensus       132 ~d~~~l~~~l~~~-~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~~~~~---~~~~~~~--~~di  201 (386)
T 2dr1_A          132 VKPEDLDDALRKN-PDVEAVTITYNETSTGVLNP----LPELAKVAKEHDKLVFVDAVSAMGGA---DIKFDKW--GLDV  201 (386)
T ss_dssp             CCHHHHHHHHHHC-TTCCEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTBTTB---CCCTTTT--TCSE
T ss_pred             CCHHHHHHHHhcC-CCCcEEEEEeecCCcchhCC----HHHHHHHHHHcCCeEEEEccccccCc---ccccccc--CCcE
Confidence            5899999999753 46889999999999999887    99999999999999999999984311   1222223  3565


Q ss_pred             E--EecccccCCcccceeeEeCHHHHhhcCCC------------------CccCCCCCCHHHHHHHHHHHHHHhhc----
Q 021893          125 V--ILGKALGGGVIPVSAVLADKEVMLCIQPG------------------EHGSTFGGNPLASAVAIASLDVIRDE----  180 (306)
Q Consensus       125 ~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~aa~~al~~~~~~----  180 (306)
                      +  |+||.++++. ++|++++++++++.+.+.                  ....+++.+.+.+.++.++++.+.+.    
T Consensus       202 ~~~s~sK~~~~~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~  280 (386)
T 2dr1_A          202 VFSSSQKAFGVPP-GLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKE  280 (386)
T ss_dssp             EEEETTSTTCCCS-SCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHH
T ss_pred             EEEeccccccCCC-ceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHH
Confidence            5  5669999776 789999999988877431                  12334567888888888899887543    


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhhCCCceee-EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----CCCEEEE
Q 021893          181 KLAERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----HDTIVRL  255 (306)
Q Consensus       181 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi  255 (306)
                      +..++++++.+++.+.|++.+  +. .... ....+.++++.++.   +.+..++++.|.++||.+.++    ..+++|+
T Consensus       281 ~~~~~~~~~~~~l~~~L~~~g--~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi  354 (386)
T 2dr1_A          281 KWLEMYEKRAKMVREGVREIG--LD-ILAEPGHESPTITAVLTPP---GIKGDEVYEAMRKRGFELAKGYGSVKEKTFRI  354 (386)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT--CC-BSSCTTCBCSSEEEEECCT---TCCHHHHHHHHHHTTEECEECCGGGTTTEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHcC--Ce-eCcCccccCCceEEEEcCC---CCCHHHHHHHHHHCCeEEecCccccCCCEEEE
Confidence            567788888888888888762  21 1111 01146777887763   345778999999999999885    3579999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          256 TPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       256 ~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +++..++++++++++++|+++++ ++.
T Consensus       355 ~~~~~~~~~~i~~~~~~l~~~~~-~~~  380 (386)
T 2dr1_A          355 GHMGYMKFEDIQEMLDNLREVIN-ELK  380 (386)
T ss_dssp             ECCSSCCHHHHHHHHHHHHHHHH-HHH
T ss_pred             ECCCCCCHHHHHHHHHHHHHHHH-HcC
Confidence            98888899999999999999988 653

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=99.91  E-value=1.7e-23  Score=186.91  Aligned_cols=243  Identities=14%  Similarity=0.135  Sum_probs=168.2

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+|++...+||+....+........    .-|...+   + ..|++++++.++    ++++|++++++|++|.+ .+.+.
T Consensus       101 d~Vl~~~p~~~~~~~~~~~~g~~~~----~v~~~~~---~-~~d~~~l~~~i~----~~~~v~l~~p~nptG~~-~~~~~  167 (356)
T 1fg7_A          101 DAILYCPPTYGMYSVSAETIGVECR----TVPTLDN---W-QLDLQGISDKLD----GVKVVYVCSPNNPTGQL-INPQD  167 (356)
T ss_dssp             CEEEECSSSCTHHHHHHHHHTCEEE----ECCCCTT---S-CCCHHHHHTSCT----TEEEEEEESSCTTTCCC-CCHHH
T ss_pred             CEEEEeCCChHHHHHHHHHcCCEEE----EeeCCCC---C-CCCHHHHHHHhc----CCCEEEEeCCCCCCCCC-CCHHH
Confidence            5677777888775544433222110    0111111   0 137888887775    57888888889999966 57899


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhccccccccccc-ccCCCCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCC
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTF  160 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~  160 (306)
                      +++|.++|+ +|+++|+||+|++++........ +.++....+.|+||.++ +|+ |+||+++++++++.+...  ..++
T Consensus       168 l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~l~~~--~~~~  243 (356)
T 1fg7_A          168 FRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGL-RCGFTLANEEVINLLMKV--IAPY  243 (356)
T ss_dssp             HHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGG-CCEEEEECHHHHHHHHHH--SCSS
T ss_pred             HHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchh-hhEEEEeCHHHHHHHHHh--cCCC
Confidence            999999999 99999999999987532222222 22333344669999998 899 999999999998877642  2345


Q ss_pred             CCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHH
Q 021893          161 GGNPLASAVAIASLDVIR---DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLK  237 (306)
Q Consensus       161 ~~~~~~~~aa~~al~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~  237 (306)
                      +.+++++.++.++++...   -++..++++++++++.+.|+++    +......+..|.++++.++      +..++++.
T Consensus       244 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~------~~~~l~~~  313 (356)
T 1fg7_A          244 PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEI----PCVEQVFDSETNYILARFK------ASSAVFKS  313 (356)
T ss_dssp             CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHS----TTEEEECCCSSSEEEEEET------THHHHHHH
T ss_pred             CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhC----CCceEECCCCCeEEEEECC------CHHHHHHH
Confidence            678888888888876532   2334556666667777666654    2222233556788888764      35689999


Q ss_pred             HHHCCceecc-CC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          238 MKERGILAKP-TH----DTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       238 l~~~Gi~~~~-~~----~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      |.++||.+.+ +.    ++++|++++   +++++++++++|++
T Consensus       314 L~~~gI~v~~~g~~~~~~~~iRis~~---~~~e~~~~~~~l~~  353 (356)
T 1fg7_A          314 LWDQGIILRDQNKQPSLSGCLRITVG---TREESQRVIDALRA  353 (356)
T ss_dssp             HHHTTEECEECTTSTTCTTEEEEECC---CHHHHHHHHHHHHT
T ss_pred             HHHCCEEEEECCCCCCCCCeEEEEeC---CHHHHHHHHHHHHh
Confidence            9999999998 42    469999964   68999999998865

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=99.91  E-value=3.3e-24  Score=197.32  Aligned_cols=260  Identities=12%  Similarity=0.086  Sum_probs=178.4

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+|++.+.+|++....+...........   ..+..+..+++++-+.+...+.+. +++++|++++++|++|.+ ++.+
T Consensus       155 gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~l~~p~NPtG~~-~~~~  229 (449)
T 3qgu_A          155 KPTVAVQDPSYPVYVDTSVMMGMTGDHNG---TGFDGIEYMVCNPDNHFFPDLSKA-KRTDIIFFCSPNNPTGAA-ATRA  229 (449)
T ss_dssp             SSCEEEEESCCTHHHHHHHHHTCSCCBCS---SSBTTEEEEECCGGGTTCCCGGGC-CCCSEEEEESSCTTTCCC-CCHH
T ss_pred             CCEEEEcCCCChhHHHHHHHcCCcccccc---cccceeEEEecccccCCcCChhHc-CCCCEEEEeCCCCCCCCc-CCHH
Confidence            46788999999887665554443211110   111223444444322222122222 467788888889999965 5789


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccc-cccccC----CCCCcEEEeccccc-CCcccceeeEeCHHHHhh-----
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRM-LASDWE----EVRPDMVILGKALG-GGVIPVSAVLADKEVMLC-----  150 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~~~~~----~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~-----  150 (306)
                      .+++|+++|++||+++|+||+|+++.+.|.. ..+..+    +..+.+.|+||.++ +|+ |+||+++++++++.     
T Consensus       230 ~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~-r~G~~~~~~~~~~~~~~~~  308 (449)
T 3qgu_A          230 QLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGV-RLGWTVVPKALKYANGEPV  308 (449)
T ss_dssp             HHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTC-CCEEEECCTTCBCTTSCBH
T ss_pred             HHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccc-eeEEEecCHHHHhhhhhhH
Confidence            9999999999999999999999987666532 122222    23345679999999 999 99999999887652     


Q ss_pred             ---cCCCCccCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec
Q 021893          151 ---IQPGEHGSTFGGNPLASAVAIASLDVIR---DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK  224 (306)
Q Consensus       151 ---~~~~~~~~~~~~~~~~~~aa~~al~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~  224 (306)
                         +.........+.+++++.++.++++...   .++..++++++++++++.|++.+     +....+..|.++|+.++ 
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~~~~~~~~~~~-  382 (449)
T 3qgu_A          309 HADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMG-----FSVYGGDDAPYIWVGFP-  382 (449)
T ss_dssp             HHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEESSSSSEEEEECT-
T ss_pred             HHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-----CeeeCCCCeeEEEEECC-
Confidence               2221223344678888888888876522   24466777888888888887752     22233445788888776 


Q ss_pred             CCChhhHHHHHHHHHHC-CceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          225 TALPVSAYDICLKMKER-GILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       225 ~~~~~~~~~~~~~l~~~-Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                         +.+..++++.|+++ ||.+.|+      +++++|++  +..+++++++++++|+++++
T Consensus       383 ---~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis--~~~~~e~i~~~l~~l~~~~~  438 (449)
T 3qgu_A          383 ---GKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRAS--AFGSRENILEAVRRFKEAYG  438 (449)
T ss_dssp             ---TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEE--CCSCHHHHHHHHHHHHHHHC
T ss_pred             ---CCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEE--ecCCHHHHHHHHHHHHHHHH
Confidence               24567899888876 9998874      36899999  55699999999999999988

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=99.91  E-value=2.6e-23  Score=187.39  Aligned_cols=222  Identities=16%  Similarity=0.196  Sum_probs=164.7

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|+++|++.++++  ++++|++++++|++|.+.+    +++|.++|++||+++|+||+|+ ++  +..+..+.++.+..+
T Consensus       135 ~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~-~g--~~~~~~~~~~~d~~~  205 (393)
T 3kgw_A          135 YTLQEVEEGLAQH--KPVLLFLVHGESSTGVVQP----LDGFGELCHRYQCLLLVDSVAS-LG--GVPIYMDQQGIDIMY  205 (393)
T ss_dssp             CCHHHHHHHHHHH--CCSEEEEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-TT--TSCCCTTTTTCCEEE
T ss_pred             CCHHHHHHHHhhC--CCcEEEEeccCCcchhhcc----HHHHHHHHHHcCCEEEEECCcc-cc--CcccchhhcCCCEEE
Confidence            4899999999853  6889999999999998887    9999999999999999999997 11  122222333333333


Q ss_pred             EEecccccCCcccceeeEeCHHHHhhcCCCCc-----------------------cCCCCCCHHHHHHHHHHHHHHhh--
Q 021893          125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEH-----------------------GSTFGGNPLASAVAIASLDVIRD--  179 (306)
Q Consensus       125 ~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~aa~~al~~~~~--  179 (306)
                      .+++|+++|+. ++|++++++++++.+.....                       ...++.+..+++++.++++.+.+  
T Consensus       206 ~s~sK~~~~~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~  284 (393)
T 3kgw_A          206 SSSQKVLNAPP-GISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQG  284 (393)
T ss_dssp             EESSSTTCCCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_pred             ecCcccccCCC-ceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence            45569998887 89999999998887754211                       11234577788888888887655  


Q ss_pred             -ccHHHHHHHHHHHHHHHHHHHHhhCCCcee--eEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC----CCC
Q 021893          180 -EKLAERSAHLGEELRQHLFKIQQQFPNYVK--EVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT----HDT  251 (306)
Q Consensus       180 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~~~  251 (306)
                       +++.++++++++++.+.|+++...   ...  .....+.++++.++.   ..+..++.+.|+++ ||.+.++    .++
T Consensus       285 ~~~~~~~~~~~~~~l~~~L~~~g~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~gi~v~~g~~~~~~~  358 (393)
T 3kgw_A          285 LENCWRRHREATAHLHKHLQEMGLK---FFVKDPEIRLPTITTVTVPA---GYNWRDIVSYVLDHFSIEISGGLGPTEER  358 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCC---BSSSSGGGBCSSEEEEECCT---TBCHHHHHHHHHHHHCEECBCCCGGGTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCe---eccCChhhcCCeEEEEeCCC---CCCHHHHHHHHHHhCCEEEeCCcccCCCC
Confidence             456788888888888888886211   110  112235666676653   35678899999998 9999975    467


Q ss_pred             EEEEeC-CCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          252 IVRLTP-PLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       252 ~lRi~~-~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      ++|+++ +...+++++++++++|+++++ ++.+
T Consensus       359 ~iRi~~~~~~~~~~~i~~~~~~l~~~l~-~~~~  390 (393)
T 3kgw_A          359 VLRIGLLGYNATTENVDRVAEALREALQ-HCPK  390 (393)
T ss_dssp             EEEEECCGGGCCHHHHHHHHHHHHHHHH-HSCB
T ss_pred             EEEEEecccCCCHHHHHHHHHHHHHHHH-hhhh
Confidence            999997 555699999999999999999 8764

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=99.91  E-value=1.3e-23  Score=191.90  Aligned_cols=227  Identities=16%  Similarity=0.110  Sum_probs=165.6

Q ss_pred             CCHHHHHHHHHhcCCcEEEEE-EccccCCCCcccCChhHHHHHHHHHH-HcCCEEEEehhhhc--cccccccc-cc----
Q 021893           45 GDITALEKIFKESGDQIAGFL-FEPIQGEAGVIIPPDGYLKAVRDLCS-KYNILMIADEIQSG--LARSGRML-AS----  115 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~-v~~~~~~~G~~~~~~~~l~~i~~l~~-~~gi~li~De~~~g--~~~~g~~~-~~----  115 (306)
                      .|++.|++.+++  .++++|+ ++.++|++|. +.+.+.+++|.++|+ +||+++|+||+|..  |...+..+ +.    
T Consensus       165 ~d~~~l~~~l~~--~~~~~v~~~~~~~NPtG~-~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~  241 (422)
T 3d6k_A          165 PDMGVVRELVKD--PQVKGMWTVPVFGNPTGV-TFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFA  241 (422)
T ss_dssp             ECHHHHHHHHTS--TTEEEEEECCSSCTTTCC-CCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHH
T ss_pred             CCHHHHHHHHhc--CCCeEEEEcCCCCCCCCC-CCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHh
Confidence            479999999974  2688888 4567888886 468999999999999 99999999999974  64443211 11    


Q ss_pred             ---ccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh---h--ccHHHHHH
Q 021893          116 ---DWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR---D--EKLAERSA  187 (306)
Q Consensus       116 ---~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~---~--~~~~~~~~  187 (306)
                         +..+..+++.||||..++|+ |+||+++++++++.+.......+++.+.+++.++.++++...   .  ++..++++
T Consensus       242 ~~~~~~~~~i~~~S~SK~~~~Gl-riG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~  320 (422)
T 3d6k_A          242 QAAGNPNRFWFMSSTSKITHAGS-GVSFFASSKENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLA  320 (422)
T ss_dssp             HHTTCTTCEEEEEESTTTSCTTS-SCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHH
T ss_pred             hccCCCCcEEEEcChhhhcCccc-ceEEEEeCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHH
Confidence               12344556779999966899 999999999998888765455566778898888887775411   1  22344555


Q ss_pred             HHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----------CCCEEEEeC
Q 021893          188 HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----------HDTIVRLTP  257 (306)
Q Consensus       188 ~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------~~~~lRi~~  257 (306)
                      ++.+.+++.|++.....+......+..|+++|+.++.    .+...+.+.|.++||.+.|+          ..+++|+++
T Consensus       321 ~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~----~~~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~  396 (422)
T 3d6k_A          321 PKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVP----GTASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAP  396 (422)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEEST----TCHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECC
T ss_pred             HHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCC----CCHHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEec
Confidence            5666666677665433211222334578888998874    14567888999999999883          147999997


Q ss_pred             CCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          258 PLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       258 ~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +. .+++++++++++|+++++ ++
T Consensus       397 ~~-~~~e~i~~~~~~l~~~l~-~~  418 (422)
T 3d6k_A          397 SL-PPVAELEVAMDGFATCVL-MA  418 (422)
T ss_dssp             SS-SCHHHHHHHHHHHHHHHH-HH
T ss_pred             CC-CCHHHHHHHHHHHHHHHH-HH
Confidence            65 799999999999999988 65

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.91  E-value=1.8e-24  Score=196.79  Aligned_cols=217  Identities=13%  Similarity=0.156  Sum_probs=161.2

Q ss_pred             HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-CCcE-
Q 021893           47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-RPDM-  124 (306)
Q Consensus        47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~~d~-  124 (306)
                      +++|+++++   +++++|++++++|++|.+ .+.+.+++|.++|++||++||+||+|+++.+.+...+. ..+. ..|+ 
T Consensus       164 ~~~l~~~l~---~~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~-~~~~~~~~i~  238 (409)
T 2gb3_A          164 PQNLESFIN---ERTKGIVLSNPCNPTGVV-YGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASA-LSIESDKVVV  238 (409)
T ss_dssp             CTTGGGGCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCG-GGSCCTTEEE
T ss_pred             HHHHHHhhC---cCCeEEEECCCCCCCCCC-cCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCc-cccCCCCEEE
Confidence            567777776   468888988899999965 57899999999999999999999999987655533322 1122 2354 


Q ss_pred             -EEeccccc-CCcccceeeEeCH-HHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHH
Q 021893          125 -VILGKALG-GGVIPVSAVLADK-EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--DEKLAERSAHLGEELRQHLFK  199 (306)
Q Consensus       125 -~s~sK~~~-~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~l~~~L~~  199 (306)
                       .|+||.++ +|+ |+||+++++ ++++.+.......+ +.+++++.++.++++...  .+++.++++++++++.+.|++
T Consensus       239 ~~s~sK~~g~~G~-r~G~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~  316 (409)
T 2gb3_A          239 IDSVSKKFSACGA-RVGCLITRNEELISHAMKLAQGRL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEE  316 (409)
T ss_dssp             EEESTTTTTCGGG-CCEEEECSCHHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EecchhccCCccc-eEEEEEECcHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             48899998 898 999999988 88887765433334 678888888888775321  133566777777778777777


Q ss_pred             HHhhCCCcee-eEEEeeeEEEEEEecCCChhhHHHHHHHHHHC------CceeccC---------CCCEEEEeCCCCCCH
Q 021893          200 IQQQFPNYVK-EVRGRGLFNAVEFDKTALPVSAYDICLKMKER------GILAKPT---------HDTIVRLTPPLSISS  263 (306)
Q Consensus       200 ~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~------Gi~~~~~---------~~~~lRi~~~~~~t~  263 (306)
                      .  .   ... ..+..|.++++.++    ..+..++++.|+++      ||.+.++         +++++|++++  +++
T Consensus       317 ~--g---~~~~~~~~~~~~~~~~~~----~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~--~~~  385 (409)
T 2gb3_A          317 H--G---LKRFTKPSGAFYITAELP----VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV--LEK  385 (409)
T ss_dssp             T--T---CCCBCCCSBSSEEEEECS----SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC--SCH
T ss_pred             c--C---ceeeeCCCeeEEEEEEeC----CCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC--CCH
Confidence            5  1   212 22345777777765    23567899999987      9999864         2679999976  899


Q ss_pred             HHHHHHHHHHHHHHhhhcC
Q 021893          264 NELQEGSKALHDVLELDLP  282 (306)
Q Consensus       264 ~~i~~~~~~l~~~l~~~~~  282 (306)
                      +++++++++|+++++ ++.
T Consensus       386 e~i~~~~~~l~~~l~-~~~  403 (409)
T 2gb3_A          386 DLLSRAIDVLMEGLK-MFC  403 (409)
T ss_dssp             HHHHHHHHHHHHHHH-HHH
T ss_pred             HHHHHHHHHHHHHHH-Hhh
Confidence            999999999999998 764

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=99.91  E-value=3.4e-23  Score=189.08  Aligned_cols=229  Identities=14%  Similarity=0.117  Sum_probs=164.6

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHH-HHcCCEEEEehhhhcccccc---c----cccc
Q 021893           45 GDITALEKIFKESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLC-SKYNILMIADEIQSGLARSG---R----MLAS  115 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~-~~~~~G~~~~~~~~l~~i~~l~-~~~gi~li~De~~~g~~~~g---~----~~~~  115 (306)
                      .|++.|++++++. +++++|+++| ++|++|.+ .+.+.+++|.++| ++||+++|+||+|+.+...+   .    .+.+
T Consensus       158 ~d~~~l~~~l~~~-~~~~~v~~~~~~~NPtG~~-~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~  235 (423)
T 3ez1_A          158 PDVDAVERLAGTD-PSVKGILFVPTYSNPGGET-ISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVL  235 (423)
T ss_dssp             ECHHHHHHHHHSC-TTEEEEEECSSSCTTTCCC-CCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHH
T ss_pred             CCHHHHHHHHhhC-CCceEEEECCCCCCCCCcC-CCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhh
Confidence            3899999999632 5789998774 67888865 5788899999999 99999999999998432222   1    1111


Q ss_pred             ----ccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHH-Hh---h--ccHHHH
Q 021893          116 ----DWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDV-IR---D--EKLAER  185 (306)
Q Consensus       116 ----~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~-~~---~--~~~~~~  185 (306)
                          +..+....+.|+||.+.+|+ |+||+++++++++.+.......+++.+.+.+.++.++++. ..   .  .+..+.
T Consensus       236 ~~~~~~~~~~i~~~S~sK~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  314 (423)
T 3ez1_A          236 ARDAGYPDRAFVFASTSKITFAGA-GLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAI  314 (423)
T ss_dssp             HHHHTCTTSEEEEEESTTTSCSSS-SCEEEEECHHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHH
T ss_pred             hhccCCCCeEEEEeCchhhccCCc-ceEEEEeCHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHH
Confidence                12333445679999977899 9999999999998887665666777888988888887775 11   0  122334


Q ss_pred             HHHHHHHHHHHHHHHHhhCC-CceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----------CCCEEE
Q 021893          186 SAHLGEELRQHLFKIQQQFP-NYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----------HDTIVR  254 (306)
Q Consensus       186 ~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------~~~~lR  254 (306)
                      ++++.+.+.+.|.+.....+ ......+..|+++++.++.    .+...+.+.|.++||.+.|+          ..+++|
T Consensus       315 ~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~----~~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iR  390 (423)
T 3ez1_A          315 IAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAE----PVADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLR  390 (423)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESS----SCHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEE
T ss_pred             HHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCC----CcHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEE
Confidence            44455555555555433321 1222344678889998875    25678899999999999882          258999


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          255 LTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       255 i~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      ++++.. +++++++++++|+++++ ++.
T Consensus       391 is~~~~-~~~~i~~~~~~l~~~l~-~~~  416 (423)
T 3ez1_A          391 LAPTRP-PVEEVRTAMQVVAACIR-LAT  416 (423)
T ss_dssp             ECCSSS-CHHHHHHHHHHHHHHHH-HHH
T ss_pred             EEcCCC-CHHHHHHHHHHHHHHHH-HHH
Confidence            998544 99999999999999998 653

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=99.90  E-value=1.3e-23  Score=191.59  Aligned_cols=222  Identities=14%  Similarity=0.126  Sum_probs=159.8

Q ss_pred             CHHHHHHHHHhc--CCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHH------HcCCEEEEehhhhccccccc---cc
Q 021893           46 DITALEKIFKES--GDQIAGFLFEPI-QGEAGVIIPPDGYLKAVRDLCS------KYNILMIADEIQSGLARSGR---ML  113 (306)
Q Consensus        46 d~~~le~~i~~~--~~~~~~v~v~~~-~~~~G~~~~~~~~l~~i~~l~~------~~gi~li~De~~~g~~~~g~---~~  113 (306)
                      |++.|++.++++  ++.+++++++++ +|++|.+ .+.+.+++|+++|+      +||+++|+||+|.++++.+.   .+
T Consensus       163 d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~-~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~  241 (418)
T 3rq1_A          163 NHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYS-IEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAF  241 (418)
T ss_dssp             CHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGG
T ss_pred             CHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHH
Confidence            799999999852  123447777766 8999965 57888999999999      89999999999998876654   22


Q ss_pred             ccccCCCCCc---E--EEeccccc-CCcccceeeEe---CHHHHhhcCCCCcc---CC-CCCCHHHHHHHHHHHHHHh--
Q 021893          114 ASDWEEVRPD---M--VILGKALG-GGVIPVSAVLA---DKEVMLCIQPGEHG---ST-FGGNPLASAVAIASLDVIR--  178 (306)
Q Consensus       114 ~~~~~~~~~d---~--~s~sK~~~-~G~~~~g~~~~---~~~~~~~~~~~~~~---~~-~~~~~~~~~aa~~al~~~~--  178 (306)
                      .....++.++   +  .|+||.++ +|+ |+||+++   ++++++.+......   .+ ...+.+++.++.++++...  
T Consensus       242 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~  320 (418)
T 3rq1_A          242 FNKFSHLPKEILTCVCYSLSKGFTMYGQ-RVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKF  320 (418)
T ss_dssp             GGGGTTCCTTEEEEEEEESTTTTTCCSS-CCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHH
T ss_pred             HHHHHhcCCCceEEEEEeCCCCCcCcCC-cceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHH
Confidence            1223344444   2  38999998 899 9999998   89988877643211   12 2467777777777664321  


Q ss_pred             ----h--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCE
Q 021893          179 ----D--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTI  252 (306)
Q Consensus       179 ----~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~  252 (306)
                          .  .++.++++++.+.+.+.|++++     .....+..|.++|+.+.      +..++++.|.++||.+.|+ +++
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~gi~v~~g-~~~  388 (418)
T 3rq1_A          321 KEYEAERNCYYQLIRDRADIFKQEAAQVG-----LPMLPYRGGFFITIPTD------SANAICEELKKEHIYVIAL-ANG  388 (418)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CCCCCCCSSSEEEEECT------THHHHHHHHHHTTEECEEC-SSE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCCCCCceEEEEcCCC------CHHHHHHHHHhCCEEEecC-CCC
Confidence                1  2345667777777777777762     22223445666665442      4678889999999999997 678


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          253 VRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       253 lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      +|+++. ..+++++++++++|+++++ ++.+
T Consensus       389 iRis~~-~~~~~~i~~~~~~l~~~l~-~~~~  417 (418)
T 3rq1_A          389 IRIAAC-GIPKCQMTGLAEKIYNAMK-SLGK  417 (418)
T ss_dssp             EEEEGG-GSCHHHHTTHHHHHHHHHH-HTTC
T ss_pred             eEEEEe-cCCHHHHHHHHHHHHHHHH-HHhc
Confidence            999954 4699999999999999998 7653

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=99.90  E-value=8.9e-24  Score=191.97  Aligned_cols=223  Identities=16%  Similarity=0.120  Sum_probs=160.7

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCC-c-
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRP-D-  123 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~-d-  123 (306)
                      |++.|++.++   +++++|++++++|++|.+ .+++.+++|.++|++||+++|+||+|+++.+.+...++..++... + 
T Consensus       163 d~~~l~~~l~---~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i  238 (406)
T 1xi9_A          163 DIDDIRKKIT---DRTKAIAVINPNNPTGAL-YDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVI  238 (406)
T ss_dssp             CHHHHHHHCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEE
T ss_pred             CHHHHHHhhC---cCceEEEEECCCCCCCCC-cCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEE
Confidence            7999999987   468888888889999965 578999999999999999999999999875533322222222122 3 


Q ss_pred             -EEEeccccc-CCcccceeeE--eCH----HHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHH
Q 021893          124 -MVILGKALG-GGVIPVSAVL--ADK----EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEEL  193 (306)
Q Consensus       124 -~~s~sK~~~-~G~~~~g~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l  193 (306)
                       +.|+||.++ +|+ |+||++  .++    ++++.+....... ++.+++++.++.++++...+  +++.++++++++++
T Consensus       239 ~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l  316 (406)
T 1xi9_A          239 VMNGLSKVYFATGW-RLGYMYFVDPENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYI  316 (406)
T ss_dssp             EEEESTTTTCCGGG-CCEEEEEECTTCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHH
T ss_pred             EEeccccccCCCcc-EEEEEEEecCchhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence             348899998 898 999999  888    8888776533333 66778888888888853211  33456666677777


Q ss_pred             HHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccCC------CCEEEEeCCCCCCHHHH
Q 021893          194 RQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTH------DTIVRLTPPLSISSNEL  266 (306)
Q Consensus       194 ~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~------~~~lRi~~~~~~t~~~i  266 (306)
                      .+.|+++    +++....+..|.++++.++.. .+.+..++++.|+ ++||.+.++.      .+++|++++  ++++++
T Consensus       317 ~~~L~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~--~~~~~i  389 (406)
T 1xi9_A          317 YKRLNEI----PGISTTKPQGAFYIFPKIEVG-PWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL--PPIEIL  389 (406)
T ss_dssp             HHHHHTS----TTEECCCCCBSSEECCEECSC-SCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC--SCHHHH
T ss_pred             HHHHHhC----CCCeeecCCeeEEEEEecCcc-CCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec--CCHHHH
Confidence            6666653    222222233466666666531 0135678999997 8899998752      679999975  899999


Q ss_pred             HHHHHHHHHHHhhhcC
Q 021893          267 QEGSKALHDVLELDLP  282 (306)
Q Consensus       267 ~~~~~~l~~~l~~~~~  282 (306)
                      ++++++|+++++ ++.
T Consensus       390 ~~~~~~l~~~l~-~~~  404 (406)
T 1xi9_A          390 EEAMDRFEKFMK-ERL  404 (406)
T ss_dssp             HHHHHHHHHHHH-HC-
T ss_pred             HHHHHHHHHHHH-HHh
Confidence            999999999998 653

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=99.90  E-value=2.2e-23  Score=190.64  Aligned_cols=226  Identities=16%  Similarity=0.115  Sum_probs=165.7

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHH-HHcCCEEEEehhhhcccccccc--c-cc-----
Q 021893           46 DITALEKIFKESGDQIAGFLFEP-IQGEAGVIIPPDGYLKAVRDLC-SKYNILMIADEIQSGLARSGRM--L-AS-----  115 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~-~~~~~G~~~~~~~~l~~i~~l~-~~~gi~li~De~~~g~~~~g~~--~-~~-----  115 (306)
                      |++.|+++++.  +++++|+++| ++|++|.+ .+.+.+++|.++| ++||+++|+||+|+++.+.+..  . ..     
T Consensus       168 d~~~l~~~l~~--~~~~~v~~~p~~~NPtG~~-~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~  244 (427)
T 3ppl_A          168 DMDAVEELVKN--PQVKGMWVVPVFSNPTGFT-VTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGE  244 (427)
T ss_dssp             CHHHHHHHTTS--TTEEEEEECCSSCTTTCCC-CCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHH
T ss_pred             CHHHHHHHHhc--CCCeEEEECCCCCCCCCcc-CCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhh
Confidence            89999999953  5789998885 67888865 5788899999999 9999999999999974333321  1 11     


Q ss_pred             --ccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh---h--ccHHHHHHH
Q 021893          116 --DWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR---D--EKLAERSAH  188 (306)
Q Consensus       116 --~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~---~--~~~~~~~~~  188 (306)
                        +..+..+++.|+||.+++|+ |+||+++++++++.+.......+++.+.+.+.++..+++...   .  .+..+.+++
T Consensus       245 ~~~~~~~~i~~~S~SK~~~~G~-r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~  323 (427)
T 3ppl_A          245 AAGNPNRFWAFTSTSKITLAGA-GVSFFLTSAENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAP  323 (427)
T ss_dssp             HTTCTTSEEEEEESTTTSCTTS-SCEEEECCHHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCcEEEEechhhccCcCc-cEEEEEcCHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHH
Confidence              12344556779999977899 999999999998888765555667778888888777765411   1  223455556


Q ss_pred             HHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----------CCCEEEEeCC
Q 021893          189 LGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----------HDTIVRLTPP  258 (306)
Q Consensus       189 ~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------~~~~lRi~~~  258 (306)
                      +.+.+.+.|++.....+......+..|+++|+.++.    .+..++.+.|.++||.+.|+          ..+++|+++.
T Consensus       324 ~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~----~~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~  399 (427)
T 3ppl_A          324 KFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVP----GTASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPS  399 (427)
T ss_dssp             HHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECST----TCHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCS
T ss_pred             HHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCc----chHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECC
Confidence            666666666654332211223345568889998874    25678899999999999882          3689999975


Q ss_pred             CCCCHHHHHHHHHHHHHHHhhhc
Q 021893          259 LSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       259 ~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .. +++++++++++|+++++ ++
T Consensus       400 ~~-~~~~i~~~~~~l~~~l~-~~  420 (427)
T 3ppl_A          400 LP-PVEELEVAMDGVATCVL-LA  420 (427)
T ss_dssp             SS-CHHHHHHHHHHHHHHHH-HH
T ss_pred             CC-CHHHHHHHHHHHHHHHH-HH
Confidence            44 89999999999999988 65

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=99.90  E-value=2.1e-22  Score=179.69  Aligned_cols=248  Identities=14%  Similarity=0.081  Sum_probs=170.5

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+|++...+||+....+..........    |..++    ...++++|+++++   + +++++++.++|++|.+ .+.+.
T Consensus        99 d~vi~~~~~~~~~~~~~~~~g~~~~~~----~~~~~----~~~~~~~l~~~l~---~-~~~v~i~~p~nptG~~-~~~~~  165 (361)
T 3ftb_A           99 EKILIIVPSYAEYEINAKKHGVSVVFS----YLDEN----MCIDYEDIISKID---D-VDSVIIGNPNNPNGGL-INKEK  165 (361)
T ss_dssp             SEEEEEESCCTHHHHHHHHTTCEEEEE----ECCTT----SCCCHHHHHHHTT---T-CSEEEEETTBTTTTBC-CCHHH
T ss_pred             CcEEEecCChHHHHHHHHHcCCeEEEe----ecCcc----cCCCHHHHHHhcc---C-CCEEEEeCCCCCCCCC-CCHHH
Confidence            367777777777554443332211110    11100    0225689998887   3 7788888889999865 57888


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCC---CcEEEeccccc-CCcccceeeE-eCHHHHhhcCCCCcc
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVR---PDMVILGKALG-GGVIPVSAVL-ADKEVMLCIQPGEHG  157 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~---~d~~s~sK~~~-~G~~~~g~~~-~~~~~~~~~~~~~~~  157 (306)
                      +++|.++|++||+++|+||+|+++.+.+........+..   ..+.|+||.++ +|+ |+||++ .++++++.+....  
T Consensus       166 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-r~g~~~~~~~~~~~~~~~~~--  242 (361)
T 3ftb_A          166 FIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGI-RFGYGITNNKEIAAKIKAKQ--  242 (361)
T ss_dssp             HHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGG-CCEEEEESCHHHHHHHHTTS--
T ss_pred             HHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCc-ceeEEEeCCHHHHHHHHhhC--
Confidence            999999999999999999999977553111112222222   23448999999 898 999988 8999998887643  


Q ss_pred             CCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCcee-eEEEeeeEEEEEEecCCChhhHHHHH
Q 021893          158 STFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVK-EVRGRGLFNAVEFDKTALPVSAYDIC  235 (306)
Q Consensus       158 ~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~  235 (306)
                      .+++.+++++.++.++++.... ++..++++++.+.+++.|++    ++ .+. ..+..|.++++.++.    .+..+++
T Consensus       243 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~----~~-~~~~~~~~~~~~~~~~~~~----~~~~~l~  313 (361)
T 3ftb_A          243 NPWNINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNK----IG-FIKRVFSPHANFVLCRLEN----ISGEKLY  313 (361)
T ss_dssp             CTTCSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHH----SS-SEEEEECCSSSEEEEEESS----SCHHHHH
T ss_pred             CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh----CC-CCceecCCCCeEEEEEcCC----CCHHHHH
Confidence            3567888998888888763211 22344555555555555554    33 333 556678888887763    4577899


Q ss_pred             HHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          236 LKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       236 ~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +.|.++||.+.++      +.+++|++++   +.++++.+++.|+++.+
T Consensus       314 ~~l~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~  359 (361)
T 3ftb_A          314 DSLLKEDIVIRRCCNFIGLDDSFVRFAIK---DEKKNTKFLRALKGVEN  359 (361)
T ss_dssp             HHHHTTTEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCeEEeeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHh
Confidence            9999999999875      2689999954   78888899998887765

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=99.90  E-value=1e-23  Score=193.73  Aligned_cols=228  Identities=16%  Similarity=0.227  Sum_probs=164.0

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc---ccccCCCCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML---ASDWEEVRP  122 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~---~~~~~~~~~  122 (306)
                      |++.|+++++...+++++|++++++|++|.+ .+.+.+++|.++|++||++||+||+|+.+. .+..+   .....+...
T Consensus       192 d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~a~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~i  269 (444)
T 3if2_A          192 DFEALENLPALKEGRIGAICCSRPTNPTGNV-LTDEEMAHLAEIAKRYDIPLIIDNAYGMPF-PNIIYSDAHLNWDNNTI  269 (444)
T ss_dssp             CHHHHHTCHHHHTTCEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCCEEEECTTCTTT-TCCBCSCCCCCCCTTEE
T ss_pred             CHHHHHHHHHhcCCCceEEEeCCCCCCCCCc-CCHHHHHHHHHHHHHCCCEEEEECCCCCcc-cccccccccccCCCCEE
Confidence            8999998854423678999998888999965 578889999999999999999999997421 11111   111233445


Q ss_pred             cEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-----ccHHHHHHHHHHHHHHHH
Q 021893          123 DMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-----EKLAERSAHLGEELRQHL  197 (306)
Q Consensus       123 d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-----~~~~~~~~~~~~~l~~~L  197 (306)
                      ++.|+||...+|+ |+||+++++++++.+....+..++..+++++.++.+.++....     +...++++++.+.+++.|
T Consensus       270 ~~~S~sK~~~~G~-r~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l  348 (444)
T 3if2_A          270 LCFSLSKIGLPGM-RTGIIVADAKVIEAVSAMNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLL  348 (444)
T ss_dssp             EEEESTTTTCGGG-CCEEEECCHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             EEechhhccCCCC-ceEEEEECHHHHHHHHHHHHhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            5779999866899 9999999999988887655555666777888777776654221     123445556666666666


Q ss_pred             HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--------------CCEEEEeCCCCCCH
Q 021893          198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--------------DTIVRLTPPLSISS  263 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--------------~~~lRi~~~~~~t~  263 (306)
                      ++..... ++....+..|.++|+.++..  ..+..++++.|.++||.+.|+.              .+++|++++.  ++
T Consensus       349 ~~~l~~~-~~~~~~~~~g~~~~~~~~~~--~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~--~~  423 (444)
T 3if2_A          349 KQALGDY-PLMIHKPEGAIFLWLWFKDL--PISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA--DE  423 (444)
T ss_dssp             HHHSSSS-SEEEECCCBSSEEEEEETTC--SSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS--CH
T ss_pred             HHhcccC-CceEecCCccEEEEEEcCCC--CCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC--CH
Confidence            6543221 12233346788888888741  2467789999999999998741              1589999765  99


Q ss_pred             HHHHHHHHHHHHHHhhhcC
Q 021893          264 NELQEGSKALHDVLELDLP  282 (306)
Q Consensus       264 ~~i~~~~~~l~~~l~~~~~  282 (306)
                      ++|++++++|+++++ ++.
T Consensus       424 e~i~~~l~~l~~~~~-~~~  441 (444)
T 3if2_A          424 QTLIDGIKVIGEVVR-ELY  441 (444)
T ss_dssp             HHHHHHHHHHHHHHH-HHH
T ss_pred             HHHHHHHHHHHHHHH-HHH
Confidence            999999999999998 654

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=99.90  E-value=2.3e-22  Score=180.69  Aligned_cols=219  Identities=15%  Similarity=0.145  Sum_probs=163.1

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|+++|++.++++  ++++|++++++|++|.+.+    +++|.++|++||+++|+|++|+.. .  ..+....+  .+|+
T Consensus       114 ~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~~~-~--~~~~~~~~--~~d~  182 (384)
T 3zrp_A          114 VKPGEVEEEVRKS--EYKLVALTHVETSTGVREP----VKDVINKIRKYVELIVVDGVSSVG-A--EEVKAEEW--NVDV  182 (384)
T ss_dssp             CCHHHHHHHHHHS--CEEEEEEESEETTTTEECC----HHHHHHHHGGGEEEEEEECTTTTT-T--SCCCTTTT--TCSE
T ss_pred             CCHHHHHHHHHhC--CCcEEEEeCCCCCCceECc----HHHHHHHHHhcCCEEEEECccccc-C--cccccccc--CCCE
Confidence            3899999999963  6999999999999998887    999999999999999999999721 1  11212222  3455


Q ss_pred             E--EecccccCCcccceeeEeCHHHHhhc-CCCC---------------------ccCCC-CCCHHHHHHHHHHHHHHhh
Q 021893          125 V--ILGKALGGGVIPVSAVLADKEVMLCI-QPGE---------------------HGSTF-GGNPLASAVAIASLDVIRD  179 (306)
Q Consensus       125 ~--s~sK~~~~G~~~~g~~~~~~~~~~~~-~~~~---------------------~~~~~-~~~~~~~~aa~~al~~~~~  179 (306)
                      +  +++|+++|+. ++|++++++++++.+ .+..                     ....+ +.+...+.++.++++.+..
T Consensus       183 ~~~s~~K~~~~~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~  261 (384)
T 3zrp_A          183 YLTASQKALGSAA-GLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEK  261 (384)
T ss_dssp             EEEETTSTTCCCS-SEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred             EEecCcccccCCC-ceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHh
Confidence            5  6669999887 899999999988776 2110                     11222 4566677777778877654


Q ss_pred             ---ccHHHHHHHHHHHHHHHHHHHHhhCCCceee--EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-C--C
Q 021893          180 ---EKLAERSAHLGEELRQHLFKIQQQFPNYVKE--VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-D--T  251 (306)
Q Consensus       180 ---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~--~  251 (306)
                         +++.++++++.+++.+.|++..  +. ....  ....+.++++.++.    .+..++.+.|.++||.+.++. .  +
T Consensus       262 ~~~~~~~~~~~~~~~~l~~~L~~~g--~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~v~~g~~~~~~  334 (384)
T 3zrp_A          262 EGIENRIKRHTMVASAIRAGLEALG--LE-IVARRPESYSNTVTGVILKV----ADPQKVLAGTVNEGVEFAPGVHPAFK  334 (384)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHHTT--CC-BSCSSGGGBCSSEEEEECSS----SCHHHHHHHHHTTTCCCEECCCTTCC
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHCC--Ce-EccCcccccCccEEEEECCC----CCHHHHHHHHHHCCEEEecCCCCCcC
Confidence               3567788888888888888762  21 1111  11246667777663    457889999999999998763 1  7


Q ss_pred             EEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          252 IVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       252 ~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      ++|++++..++++++++++++|+++++ ++..
T Consensus       335 ~iRi~~~~~~~~e~i~~~~~~l~~~l~-~~~~  365 (384)
T 3zrp_A          335 YFRIGHMGWVTPNDAIIAISVIERTLR-KLGE  365 (384)
T ss_dssp             EEEEECCSSCCHHHHHHHHHHHHHHHH-HHTC
T ss_pred             EEEEeccccCCHHHHHHHHHHHHHHHH-HcCC
Confidence            899999888999999999999999999 7653

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=99.90  E-value=2.1e-23  Score=186.62  Aligned_cols=213  Identities=17%  Similarity=0.160  Sum_probs=156.9

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccc--cc-cccc----ccc
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR--SG-RMLA----SDW  117 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~--~g-~~~~----~~~  117 (306)
                      .|+++|+++++   +++++|+++.++|++|.+. +.+.+++|+++| ++|+++|+||+|+++.+  .+ ....    .+.
T Consensus       141 ~d~~~l~~~l~---~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  215 (365)
T 3get_A          141 DEFKKLYETHK---DEIKLIFLCLPNNPLGECL-DASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKE  215 (365)
T ss_dssp             HHHHHHHHHTT---TTEEEEEEESSCTTTCCCC-CHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHH
T ss_pred             CCHHHHHHHhC---CCCCEEEEcCCCCCCCCCc-CHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhcc
Confidence            36788888887   5799999988999999765 566677777766 67999999999997652  22 2111    122


Q ss_pred             CCCCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHH
Q 021893          118 EEVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQ  195 (306)
Q Consensus       118 ~~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~  195 (306)
                      .+....+.|+||.++ +|+ |+||+++++++++.+....  ..++.+++++.++.++++.... ++..++++++.+++++
T Consensus       216 ~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~  292 (365)
T 3get_A          216 FDNVLYLGTFSKLYGLGGL-RIGYGIANANIISAFYKLR--APFNVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKE  292 (365)
T ss_dssp             CTTEEEEEESSSTTSCTTT-CCEEEEECHHHHHHHHHHS--CTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeecchHhcCcch-heEEEEcCHHHHHHHHHhc--CCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence            333345569999998 899 9999999999988776532  2456788888888888864311 3345666667777777


Q ss_pred             HHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC---CCEEEEeCCCCCCHHHHHHHHHH
Q 021893          196 HLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---DTIVRLTPPLSISSNELQEGSKA  272 (306)
Q Consensus       196 ~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~~~lRi~~~~~~t~~~i~~~~~~  272 (306)
                      .|++..     .. ..+..|.++++.++.   . +..++.+.|.++||.+.++.   .+++|++++   +++++++++++
T Consensus       293 ~l~~~g-----~~-~~~~~~~~~~~~~~~---~-~~~~~~~~l~~~gi~v~~g~~~~~~~iRis~~---~~~~i~~l~~~  359 (365)
T 3get_A          293 FAKKHN-----IK-IIDSYTNFITYFFDE---K-NSTDLSEKLLKKGIIIRNLKSYGLNAIRITIG---TSYENEKFFTE  359 (365)
T ss_dssp             HHHHTT-----CE-ECCCSSSEEEEECSS---S-CHHHHHHHHHTTTEECEECGGGTCSEEEEECC---CHHHHHHHHHH
T ss_pred             HHHhCC-----CE-ECCCCCeEEEEECCC---C-CHHHHHHHHHHCCEEEEECccCCCCEEEEEcC---CHHHHHHHHHH
Confidence            776651     21 234567778887764   2 67889999999999999875   689999954   89999999999


Q ss_pred             HHHHHh
Q 021893          273 LHDVLE  278 (306)
Q Consensus       273 l~~~l~  278 (306)
                      |+++++
T Consensus       360 l~~~l~  365 (365)
T 3get_A          360 FDKILR  365 (365)
T ss_dssp             HHHHHC
T ss_pred             HHHHhC
Confidence            998763

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=99.90  E-value=8e-23  Score=185.22  Aligned_cols=223  Identities=17%  Similarity=0.215  Sum_probs=165.8

Q ss_pred             cccccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c-cccccccccc
Q 021893           39 HLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLAS  115 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~  115 (306)
                      +..+|++|+++||+++++.. +++++|++++++|++|.+.+    +++|.++|++||+++|+||+|+ | +++.|..+. 
T Consensus       156 ~~~v~~~d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~-  230 (401)
T 2bwn_A          156 KRIFRHNDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGP----IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVA-  230 (401)
T ss_dssp             EEEECTTCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHH-
T ss_pred             EEEEcCCCHHHHHHHHHhhccCCceEEEEecCcCCCCCcCC----HHHHHHHHHHcCCEEEEeccccccccCCCCceee-
Confidence            45677789999999998654 47899999999999999888    9999999999999999999999 3 455555442 


Q ss_pred             ccCCC----CCcEEEecccccCCcccceeeEeCHHHHhhcCCCCc--cCCCCCCHHHHHHHHHHHHHHhh---ccHHHHH
Q 021893          116 DWEEV----RPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEH--GSTFGGNPLASAVAIASLDVIRD---EKLAERS  186 (306)
Q Consensus       116 ~~~~~----~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~  186 (306)
                      ...++    .+.+.|+||+++.   +.||+++++++++.+.....  ..+...++++++++.++++.+..   ++..+++
T Consensus       231 ~~~~~~~~~~i~~~s~sK~~~~---~GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~  307 (401)
T 2bwn_A          231 ERDGLMHRIDIFNGTLAKAYGV---FGGYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQ  307 (401)
T ss_dssp             HHHTCGGGCSEEEEESSSTTCS---CCEEEEECHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred             eccCccccCcEEEeechhhccC---CCCEEecCHHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence            22232    3345599999982   11568889888876653211  11122356788888889988765   3578888


Q ss_pred             HHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC-------CCCEEEEeCC
Q 021893          187 AHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT-------HDTIVRLTPP  258 (306)
Q Consensus       187 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-------~~~~lRi~~~  258 (306)
                      +++++++++.|++..  +. ..   ...+.++++.++.   ..+..++++.|+ ++||.+.|.       +.+++|++++
T Consensus       308 ~~~~~~l~~~L~~~g--~~-~~---~~~~~~~~~~~~~---~~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~  378 (401)
T 2bwn_A          308 QMHAKVLKMRLKALG--MP-II---DHGSHIVPVVIGD---PVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPS  378 (401)
T ss_dssp             HHHHHHHHHHHHHHT--CC-BC---CCSSSCEEEECCC---HHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCC
T ss_pred             HHHHHHHHHHHHHCC--Cc-cc---CCCCCeEEEEeCC---hHHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEee
Confidence            999999999998862  21 11   2234577887763   356778999996 789999764       2358999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHh
Q 021893          259 LSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       259 ~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ..++++++++++++|+++++
T Consensus       379 ~~~t~~~i~~~~~~l~~~~~  398 (401)
T 2bwn_A          379 PVHDLKQIDGLVHAMDLLWA  398 (401)
T ss_dssp             TTSCHHHHHHHHHHHHHHC-
T ss_pred             CCCCHHHHHHHHHHHHHHHH
Confidence            88999999999999998877

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=99.90  E-value=2.3e-22  Score=179.33  Aligned_cols=222  Identities=14%  Similarity=0.144  Sum_probs=165.2

Q ss_pred             CCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc
Q 021893           44 FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        44 ~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d  123 (306)
                      ..|+++|+++++++ .++++|++.++++++|.+.+    +++|.++|++||+++|+||+|+. +..+  +....  ..+|
T Consensus       116 ~~d~~~l~~~l~~~-~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~-~~~~--~~~~~--~~~d  185 (366)
T 1m32_A          116 RPDVQAIDAILNAD-PTISHIAMVHSETTTGMLNP----IDEVGALAHRYGKTYIVDAMSSF-GGIP--MDIAA--LHID  185 (366)
T ss_dssp             CCCHHHHHHHHHHC-TTCCEEEEESEETTTTEECC----HHHHHHHHHHHTCEEEEECTTTT-TTSC--CCTTT--TTCS
T ss_pred             CCCHHHHHHHHhcC-CCeEEEEEecccCCcceecC----HHHHHHHHHHcCCEEEEECCccc-cCcC--ccccc--cCcc
Confidence            36899999999864 35778888888889998887    99999999999999999999982 2221  22222  2356


Q ss_pred             EE--EecccccCCcccceeeEeCHHHHhhcCCCCc------------------cCCCCCCHHHHHHHHHHHHHHhhc---
Q 021893          124 MV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEH------------------GSTFGGNPLASAVAIASLDVIRDE---  180 (306)
Q Consensus       124 ~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~aa~~al~~~~~~---  180 (306)
                      ++  |++|+++++. ++|++++++++++.+.....                  ...++.+..+++++.++++.+.+.   
T Consensus       186 i~~~s~~K~~~~~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~  264 (366)
T 1m32_A          186 YLISSANKCIQGVP-GFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGV  264 (366)
T ss_dssp             EEEEESSSTTCCCS-SEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHH
T ss_pred             EEEecCcccccCCC-ceEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCH
Confidence            55  6789998777 88999999999887765311                  012567788888888888877543   


Q ss_pred             -cHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC---CCCEEEE
Q 021893          181 -KLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT---HDTIVRL  255 (306)
Q Consensus       181 -~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---~~~~lRi  255 (306)
                       +..++++++++++++.|+++.  +. ..... ...+.++++.+++. .+.+..++.+.|.++||.+.++   ..+++|+
T Consensus       265 ~~~~~~~~~~~~~l~~~L~~~~--~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~~~~~~~~~iRi  340 (366)
T 1m32_A          265 AARHQRYQQNQRSLVAGMRALG--FN-TLLDDELHSPIITAFYSPED-PQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRI  340 (366)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT--CC-BSSCGGGBCSSEEEEECCCC-TTCCHHHHHHHHHHTTEECEECCCSSSCEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHCC--Ce-eccCchhcCceEEEEEcCcc-CCCCHHHHHHHHHHCCEEEECCcCCCCCEEEE
Confidence             367788888888888888752  21 11110 13566788877631 0235778999999999999876   4689999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          256 TPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       256 ~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +++..++++++++++++|+++++ ++
T Consensus       341 ~~~~~~~~~~i~~~~~~l~~~~~-~~  365 (366)
T 1m32_A          341 GNIGEVYAADITALLTAIRTAMY-WT  365 (366)
T ss_dssp             ECCSSCCHHHHHHHHHHHHHHCT-TC
T ss_pred             ecCCCCCHHHHHHHHHHHHHHHH-hc
Confidence            99888899999999999998887 53

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=99.90  E-value=9.3e-24  Score=193.36  Aligned_cols=262  Identities=11%  Similarity=0.056  Sum_probs=171.7

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+|++.+.+|++....+........... ....+..+..++.++-+.+...+++. +++++|+++.++|++|.+ ++.+
T Consensus       142 gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~v~l~~p~NPtG~~-~~~~  218 (432)
T 3ei9_A          142 NVTIAVQDPSYPAYVDSSVIMGQTGQFNT-DVQKYGNIEYMRCTPENGFFPDLSTV-GRTDIIFFCSPNNPTGAA-ATRE  218 (432)
T ss_dssp             TCCEEEEESCCTHHHHHHHHHTCSCCEET-TTTEETTCEEEECCGGGTTSCCGGGC-CCCSEEEEESSCTTTCCC-CCHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHcCCcccccc-cccccCceEEeccCcccCCcCChhhC-CCCCEEEEeCCCCCCCCC-CCHH
Confidence            35788888888876555443332111110 00111223344443211111112222 467788888889999865 5788


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccC----CCCCcEEEeccccc-CCcccceeeEeCHHH--------H
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE----EVRPDMVILGKALG-GGVIPVSAVLADKEV--------M  148 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~----~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~--------~  148 (306)
                      .+++|.++|++||++||+||+|+++...+........    +....+.|+||.++ +|+ |+||+++++++        +
T Consensus       219 ~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~-r~G~~~~~~~~~~~~~~~~~  297 (432)
T 3ei9_A          219 QLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGV-RLGWTVIPKKLLYSDGFPVA  297 (432)
T ss_dssp             HHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTT-CCEEEECCTTCBCTTSCBHH
T ss_pred             HHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCccc-ceEEEEEChHHhhcchHHHH
Confidence            9999999999999999999999987544433222221    22334669999999 999 99999998877        4


Q ss_pred             hhcCCCCccCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecC
Q 021893          149 LCIQPGEHGSTFGGNPLASAVAIASLDVIR---DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT  225 (306)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~aa~~al~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~  225 (306)
                      +.+........++.+++++.++.++++...   .++..++++++.+++++.|++.+     +....+..+.++|+.++. 
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-----~~~~~~~~~~~~~~~~~~-  371 (432)
T 3ei9_A          298 KDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLG-----YDVYGGKNAPYVWVHFPN-  371 (432)
T ss_dssp             HHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEECSSSSEEEEECTT-
T ss_pred             HHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCC-----ceecCCCcceEEEEECCC-
Confidence            554432233344568888888887774321   13456777788888888887752     222233467788888762 


Q ss_pred             CChhhHHHHHHHHHHC-CceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          226 ALPVSAYDICLKMKER-GILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       226 ~~~~~~~~~~~~l~~~-Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                         .+..++++.|+++ ||.+.|+      +++++|++  +..+++++++++++|++--.
T Consensus       372 ---~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis--~~~~~e~l~~~l~rl~~~~~  426 (432)
T 3ei9_A          372 ---QSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVS--AFGHRENILEACRRFKQLYK  426 (432)
T ss_dssp             ---SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEE--CCSCHHHHHHHHHHHHHHHT
T ss_pred             ---CCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEE--ecCCHHHHHHHHHHHHHHhh
Confidence               4567888888765 9999874      36899999  56799999999999987554

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=99.90  E-value=4.8e-23  Score=186.97  Aligned_cols=220  Identities=17%  Similarity=0.131  Sum_probs=163.2

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |+++|+++++++  ++++|++++++|++|.+.+    +++|.++|++||+++|+||+|+..   ...+....++.+..+.
T Consensus       126 d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~~---~~~~~~~~~~~d~~~~  196 (411)
T 3nnk_A          126 TPDQVEDAVKRI--RPRLLLTVQGDTSTTMLQP----LAELGEICRRYDALFYTDATASLG---GNPLETDVWGLDAVSA  196 (411)
T ss_dssp             CHHHHHHHHHHH--CCSEEEEESEETTTTEECC----CTTHHHHHHHHTCEEEEECTTTBT---TBCCCTTTTTCSEEEC
T ss_pred             CHHHHHHHHhhC--CCeEEEEeCCCCCcceecc----HHHHHHHHHHcCCEEEEECCcccC---CcccchhccCCcEEEe
Confidence            899999999853  6889999999999999887    999999999999999999998721   1122233333333334


Q ss_pred             EecccccCCcccceeeEeCHHHHhhcCCCC------------------------------------ccCCCCCCHHHHHH
Q 021893          126 ILGKALGGGVIPVSAVLADKEVMLCIQPGE------------------------------------HGSTFGGNPLASAV  169 (306)
Q Consensus       126 s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~a  169 (306)
                      +++|+++++. ++|++++++++++.+.+..                                    ....++.+..++.+
T Consensus       197 s~~K~l~~~~-g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  275 (411)
T 3nnk_A          197 GMQKCLGGPS-GTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFG  275 (411)
T ss_dssp             CSTTTTCCCS-SEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHH
T ss_pred             cCccccCCCC-ceEEEEECHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHH
Confidence            6669988887 8999999999887765422                                    01223457777777


Q ss_pred             HHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhCCCcee-eEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-Cce
Q 021893          170 AIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVK-EVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GIL  244 (306)
Q Consensus       170 a~~al~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~  244 (306)
                      +.++++.+..+   +..++++++++++++.|++....   ... .....+.++++.+++   ..+..++.+.|+++ ||.
T Consensus       276 ~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~---~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~l~~~~gi~  349 (411)
T 3nnk_A          276 ARECARLILQEGLDYGIARHKLHGDALVKGIQAMGLE---TFGDLKHKMNNVLGVVIPQ---GINGDQARKLMLEDFGIE  349 (411)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC---BCSCGGGBCSSEEEEECCT---TCCHHHHHHHHHHHHSEE
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCE---eCCCcccccccEEEEECCC---CCCHHHHHHHHHHhcCeE
Confidence            77888876553   56778888888888888876211   111 112246677777753   34677899999887 999


Q ss_pred             eccC----CCCEEEEeC-CCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          245 AKPT----HDTIVRLTP-PLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       245 ~~~~----~~~~lRi~~-~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +.++    .++++|+++ +..++++++++++++|+++++ ++.
T Consensus       350 v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~-~~~  391 (411)
T 3nnk_A          350 IGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLN-YLK  391 (411)
T ss_dssp             EEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH-HTT
T ss_pred             EeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHH-HcC
Confidence            9874    467999997 667799999999999999999 764

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=99.90  E-value=2.2e-22  Score=182.15  Aligned_cols=252  Identities=16%  Similarity=0.167  Sum_probs=169.9

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+|++...+|||.......+.........+.|...+    -..|++.|+++++   +++++|++++++|++|.+.+   
T Consensus       113 gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~d~~~l~~~l~---~~~~~v~~~~~~nptG~~~~---  182 (406)
T 1kmj_A          113 GDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPD----GTLQLETLPTLFD---EKTRLLAITHVSNVLGTENP---  182 (406)
T ss_dssp             TCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTT----SCBCGGGHHHHCC---TTEEEEEEESBCTTTCCBCC---
T ss_pred             CCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCC----CCcCHHHHHHHhc---cCCeEEEEeCCCccccCcCC---
Confidence            3578999999988764322111100001001111111    1237899999887   47899999999999998887   


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE--EEecccccCCcccceeeEeCHHHHhhcCCCCccCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM--VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGST  159 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~--~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~  159 (306)
                       +++|.++|++||+++|+||+|+.. ..  .+.....  .+|+  .|++|.++ +. ++|++++++++++.+.+.....+
T Consensus       183 -l~~i~~l~~~~~~~li~D~~~~~g-~~--~~~~~~~--~~d~~~~s~~K~~g-~~-G~G~~~~~~~~~~~~~~~~~~~~  254 (406)
T 1kmj_A          183 -LAEMITLAHQHGAKVLVDGAQAVM-HH--PVDVQAL--DCDFYVFSGHKLYG-PT-GIGILYVKEALLQEMPPWEGGGS  254 (406)
T ss_dssp             -HHHHHHHHHHTTCEEEEECTTTTT-TS--CCCHHHH--TCSEEEEEGGGTTS-CT-TCEEEEECHHHHHHCCCSSCSTT
T ss_pred             -HHHHHHHHHHcCCEEEEEchhhcC-CC--CCccccc--CCCEEEEEchhccC-CC-CcEEEEEeHHHHhhcCCcccCCC
Confidence             999999999999999999999832 11  1112222  3555  47899884 33 47999999999988876442211


Q ss_pred             ---------------------CCCCHHHHHHHH-HHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE-
Q 021893          160 ---------------------FGGNPLASAVAI-ASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG-  213 (306)
Q Consensus       160 ---------------------~~~~~~~~~aa~-~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-  213 (306)
                                           ...+.+.+.++. ++++.+.+   +++.++++++.+++++.|+++    ++. ..... 
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~-~~~~~~  329 (406)
T 1kmj_A          255 MIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESV----PDL-TLYGPQ  329 (406)
T ss_dssp             SEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTS----TTE-EEESCT
T ss_pred             ceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcC----CCe-EEecCC
Confidence                                 123444444444 77777754   245666777777777777653    212 22223 


Q ss_pred             -eeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhh
Q 021893          214 -RGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------------DTIVRLTPPLSISSNELQEGSKALHDVLELD  280 (306)
Q Consensus       214 -~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~  280 (306)
                       .+.++.+.++    ..+..++.+.|.++||.+.++.            ++++|++++..++++|++.++++|+++++ .
T Consensus       330 ~~~~~~~~~~~----~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~-~  404 (406)
T 1kmj_A          330 NRLGVIAFNLG----KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHR-L  404 (406)
T ss_dssp             TCCSEEEEEET----TCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHH-H
T ss_pred             CcCCEEEEEEC----CCCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHH-h
Confidence             5667777664    2356788999999999988642            58999999988899999999999999887 5


Q ss_pred             c
Q 021893          281 L  281 (306)
Q Consensus       281 ~  281 (306)
                      +
T Consensus       405 l  405 (406)
T 1kmj_A          405 L  405 (406)
T ss_dssp             H
T ss_pred             h
Confidence            4

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=99.90  E-value=2.4e-23  Score=186.44  Aligned_cols=248  Identities=13%  Similarity=0.113  Sum_probs=177.2

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCccccc--CC-----CHHHHHHHHHhcC--CcEEEEEEccccCC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVD--FG-----DITALEKIFKESG--DQIAGFLFEPIQGE   72 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----d~~~le~~i~~~~--~~~~~v~v~~~~~~   72 (306)
                      +.+|++.+.+||+....+.....             .++.++  .+     |+++|++.++++.  +++++|++++++|+
T Consensus        93 gd~vl~~~~~~~~~~~~~~~~g~-------------~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~np  159 (371)
T 2e7j_A           93 DAWVVMDENCHYSSYVAAERAGL-------------NIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGN  159 (371)
T ss_dssp             TCEEEEETTCCHHHHHHHHHTTC-------------EEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTT
T ss_pred             CCEEEEccCcchHHHHHHHHcCC-------------eEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCC
Confidence            35677777788776554322111             112222  22     8999999998642  46899999999999


Q ss_pred             CCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhh-c
Q 021893           73 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC-I  151 (306)
Q Consensus        73 ~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~-~  151 (306)
                      +|.+.+    +++|.++|++||+++|+||+|+++. .+  +....++.+..+.|+||+++++. |+|++++++++++. +
T Consensus       160 tG~~~~----~~~i~~~~~~~~~~li~D~a~~~~~-~~--~~~~~~~~di~~~s~sK~~~~~~-~~G~~~~~~~~~~~~~  231 (371)
T 2e7j_A          160 YGNLPD----VKKIAKVCSEYDVPLLVNGAYAIGR-MP--VSLKEIGADFIVGSGHKSMAASG-PIGVMGMKEEWAEIVL  231 (371)
T ss_dssp             TCCCCC----HHHHHHHHHTTTCCEEEECTTTBTT-BC--CCHHHHTCSEEEEEHHHHSSCCS-SCEEEEECTTTTTTTT
T ss_pred             CcccCC----HHHHHHHHHHcCCeEEEECccccCC-CC--CChhhcCCCEEEecCCcCCCCCC-CcEEEEEechhhhhhc
Confidence            999888    8999999999999999999998532 11  22222333333447799999888 99999999998887 7


Q ss_pred             CCCCc--cC-----CCCCCHHHHHHHHHHHHHHhhccHHHHH--HHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE
Q 021893          152 QPGEH--GS-----TFGGNPLASAVAIASLDVIRDEKLAERS--AHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF  222 (306)
Q Consensus       152 ~~~~~--~~-----~~~~~~~~~~aa~~al~~~~~~~~~~~~--~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~  222 (306)
                      .+...  ..     .++.++..++++.++++.+.. ++.+++  +++++++++.|++.  .+. ........+.++++.+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~~--~~~-~~~~~~~~~~~~~~~~  307 (371)
T 2e7j_A          232 RRSEKYKNKEVELLGCTARGATIITLMASFPHVRE-RIKRWDEEVEKARRFAAEMEKL--GIK-QLGDNPHNHDLMFFHA  307 (371)
T ss_dssp             CBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH-HGGGHHHHHHHHHHHHHHHHHT--TCE-EESSSSCCSSEEEEEC
T ss_pred             cccccCcccccccccCCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHc--CcE-EecCCCccCceEEEEC
Confidence            65433  22     445677777777788887765 566777  88888888888876  210 1111111466777766


Q ss_pred             ecCCChhhHHHHHHHHHHCCceeccC-------C--CCEEE-EeCCCC-CCHHHHHHHHHHHHHHHhhhc
Q 021893          223 DKTALPVSAYDICLKMKERGILAKPT-------H--DTIVR-LTPPLS-ISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       223 ~~~~~~~~~~~~~~~l~~~Gi~~~~~-------~--~~~lR-i~~~~~-~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +      +..++.+.|.++||.+.|.       +  ++++| ++++.. ++++++++++++|+++++ ++
T Consensus       308 ~------~~~~~~~~l~~~gi~~~~~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~-~~  370 (371)
T 2e7j_A          308 E------VLYEISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIE-KY  370 (371)
T ss_dssp             H------HHHHHHHHSSSGGGHHHHHHHHTTEECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHH-HC
T ss_pred             C------CHHHHHHHHHHCCEEEEeccccccccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHH-hc
Confidence            4      4567899999999998761       1  57899 998776 899999999999999987 54

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.89  E-value=7.9e-23  Score=189.02  Aligned_cols=263  Identities=17%  Similarity=0.133  Sum_probs=180.0

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC-----CCHHHHHHHHHhcCCcEEEEEEccccCCCCcc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEPIQGEAGVI   76 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~   76 (306)
                      +.+||+...+||+...........    .+..+....+...|.     -|+++|+++|+++.+++++|++++++|++|.+
T Consensus       155 ~~~Vl~~~~~~~s~~~~~~~~~~~----~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~  230 (465)
T 3e9k_A          155 RYKILLEAKAFPSDHYAIESQLQL----HGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQH  230 (465)
T ss_dssp             SCEEEEETTCCHHHHHHHHHHHHH----TTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBB
T ss_pred             CCEEEEcCCcCCchHHHHHHHHHH----cCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCccee
Confidence            346888888998866543322110    000000000011111     27999999998765689999999999999999


Q ss_pred             cCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCc
Q 021893           77 IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEH  156 (306)
Q Consensus        77 ~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~  156 (306)
                      .+    +++|.++|++||+++|+|++|+. +.  ..+....++.+..+.|++|.+++|..++|++++++++.+.+.+...
T Consensus       231 ~~----l~~i~~la~~~g~~vi~D~a~~~-g~--~~~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~  303 (465)
T 3e9k_A          231 FN----IPAITKAGQAKGCYVGFDLAHAV-GN--VELYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALV  303 (465)
T ss_dssp             CC----HHHHHHHHHHTTCEEEEECTTTT-TT--SCCCHHHHTCCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSC
T ss_pred             ec----HHHHHHHHHHcCCEEEEEhhhhc-CC--cCCchhhcCCCEEEECcccccccCCCceEEEEEcHHHHhhcCCccc
Confidence            88    99999999999999999999972 11  1122223333333446779996444268999999998777664321


Q ss_pred             c---C----------------------CCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhh-----
Q 021893          157 G---S----------------------TFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQ-----  203 (306)
Q Consensus       157 ~---~----------------------~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~-----  203 (306)
                      +   +                      ..+.+.++++++.++++.+.+   +++.++.+++.+++.+.|++....     
T Consensus       304 g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  383 (465)
T 3e9k_A          304 GWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAAT  383 (465)
T ss_dssp             CGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC------
T ss_pred             CccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhcccccccc
Confidence            1   0                      014567778888888888765   457788888888888888875210     


Q ss_pred             -CCCceee----EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeC-CCCCCHHHHHHHHHHHHHHH
Q 021893          204 -FPNYVKE----VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTP-PLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       204 -~~~~~~~----~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~-~~~~t~~~i~~~~~~l~~~l  277 (306)
                       .++....    ....|.++++.++.     +..++.+.|.++||.+....++++|+++ +..++.+|++++++.|++++
T Consensus       384 ~~~g~~~~~p~~~~~~g~~~~~~~~~-----~~~~l~~~L~~~Gi~v~~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l  458 (465)
T 3e9k_A          384 KKPVVNIITPSHVEERGCQLTITFSV-----PNKDVFQELEKRGVVCDKRNPNGIRVAPVPLYNSFHDVYKFTNLLTSIL  458 (465)
T ss_dssp             ---CEEECSCSSGGGBCSCEEEEECC-----TTCCHHHHHHTTTEECEEETTTEEEEBCCTTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEeCCCCHhhcccEEEEEecC-----CHHHHHHHHHHCCEEEecCCCCEEEEeCcccCCCHHHHHHHHHHHHHHH
Confidence             0111111    11247788887762     3457899999999999877789999998 89999999999999999999


Q ss_pred             hhhc
Q 021893          278 ELDL  281 (306)
Q Consensus       278 ~~~~  281 (306)
                      + +.
T Consensus       459 ~-~~  461 (465)
T 3e9k_A          459 D-SA  461 (465)
T ss_dssp             T-C-
T ss_pred             H-hc
Confidence            8 54

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=99.89  E-value=2e-22  Score=181.46  Aligned_cols=211  Identities=16%  Similarity=0.160  Sum_probs=157.7

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH----HcCCEEEEehhhhcccccccccccccCCC
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCS----KYNILMIADEIQSGLARSGRMLASDWEEV  120 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~----~~gi~li~De~~~g~~~~g~~~~~~~~~~  120 (306)
                      .|++.|++.++   +++++|++++++|++|.+.+    +++|.++|+    +||+++|+||+|+ ++..  .+...  ..
T Consensus       142 ~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~~~li~Dea~~-~g~~--~~~~~--~~  209 (390)
T 1elu_A          142 DAAAVLANHLG---PKTRLVILSHLLWNTGQVLP----LAEIMAVCRRHQGNYPVRVLVDGAQS-AGSL--PLDFS--RL  209 (390)
T ss_dssp             CHHHHHHTTCC---TTEEEEEEESBCTTTCCBCC----HHHHHHHHHHCCSSSCCEEEEECTTT-BTTB--CCCTT--TS
T ss_pred             chHHHHHHhcC---CCceEEEEeccccCCceecC----HHHHHHHHhhhhhhcCcEEEEEcccc-cCCc--CCChh--hc
Confidence            36888888886   47999999999999999888    999999999    9999999999998 3222  12122  23


Q ss_pred             CCcEE--EecccccCCcccceeeEeCHHHHhhcCCCC----------------------ccCCCCCCHHHHHHHHHHHHH
Q 021893          121 RPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGE----------------------HGSTFGGNPLASAVAIASLDV  176 (306)
Q Consensus       121 ~~d~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~aa~~al~~  176 (306)
                      .+|++  |++|++.||. ++|++++++++++.+.+..                      .....+.+.+++.++.++++.
T Consensus       210 ~~d~~~~s~~K~~~~~~-g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~  288 (390)
T 1elu_A          210 EVDYYAFTGHKWFAGPA-GVGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQL  288 (390)
T ss_dssp             CCSEEEEESSSTTCCCT-TCEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHH
T ss_pred             CCCEEEccccccccCCC-ceEEEEECHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHH
Confidence            45655  6889888888 9999999999988876532                      112234567777777788887


Q ss_pred             Hhhcc----HHHHHHHHHHHHHHHHHHHHhhCCCceeeE--EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-
Q 021893          177 IRDEK----LAERSAHLGEELRQHLFKIQQQFPNYVKEV--RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-  249 (306)
Q Consensus       177 ~~~~~----~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-  249 (306)
                      +.+.+    ..++++++++++.+.|+++    ++.....  +..+.++.+.++.   +.+..++.+.|.++||.+.++. 
T Consensus       289 l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~v~~~~~  361 (390)
T 1elu_A          289 HQRQGTAEERYQAICQRSEFLWRGLNQL----PHVHCLATSAPQAGLVSFTVDS---PLGHRAIVQKLEEQRIYLRTIAD  361 (390)
T ss_dssp             HHHHCCHHHHHHHHHHHHHHHHHHHHHS----TTEEESCSSCCSSSEEEEEECS---SSCHHHHHHHHHHTTEECEEETT
T ss_pred             HHHcCCHHHHHHHHHHHHHHHHHHHHhc----CCcEEecCccccccEEEEEcCC---CCCHHHHHHHHHHCCEEEEecCC
Confidence            75533    5667777777777777764    1121111  3457777777753   3457789999999999999874 


Q ss_pred             CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          250 DTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       250 ~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      ++++|++++...+++++++++++|++
T Consensus       362 ~~~iRis~~~~~~~~~i~~~~~~l~~  387 (390)
T 1elu_A          362 PDCIRACCHYITDEEEINHLLARLAD  387 (390)
T ss_dssp             TTEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred             CCeEEEecccCCCHHHHHHHHHHHHh
Confidence            68999999888999999999998864

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=99.89  E-value=2.8e-23  Score=189.06  Aligned_cols=223  Identities=14%  Similarity=0.144  Sum_probs=160.3

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-c--cccCCCCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-A--SDWEEVRP  122 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~--~~~~~~~~  122 (306)
                      |++.|+  ++   ++++++++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+.+. .+..+ .  ....+...
T Consensus       171 d~~~l~--~~---~~~~~v~~~~p~NptG~~-~~~~~~~~l~~~a~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~i  243 (417)
T 3g7q_A          171 DFEHLH--IG---EETGMICVSRPTNPTGNV-ITDEELMKLDRLANQHNIPLVIDNAYGVPF-PGIIFSEARPLWNPNII  243 (417)
T ss_dssp             CGGGCC--CC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCCEEEECTTCTTT-TCCBCSCCCCCCCTTEE
T ss_pred             CHHHhc--cc---cCceEEEECCCCCCCCCc-cCHHHHHHHHHHHHHcCCEEEEeCCCcccc-ccccccccccCCCCCEE
Confidence            677776  33   578999999999999965 578889999999999999999999997431 11111 0  11123334


Q ss_pred             cEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-----ccHHHHHHHHHHHHHHHH
Q 021893          123 DMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-----EKLAERSAHLGEELRQHL  197 (306)
Q Consensus       123 d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-----~~~~~~~~~~~~~l~~~L  197 (306)
                      .+.|+||...+|+ |+||+++++++++.+....+..+++.+++++.++.+.++...-     +...++++++.+.+.+.|
T Consensus       244 ~~~s~sK~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l  322 (417)
T 3g7q_A          244 LCMSLSKLGLPGS-RCGIIIANDKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAII  322 (417)
T ss_dssp             EEEESGGGTCTTS-CCEEEECCHHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             EEEechhccCCCc-ceEEEEeCHHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4679999655899 9999999999998887655556677788888887777753211     113445566666666666


Q ss_pred             HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-------------CCEEEEeCCCCCCHH
Q 021893          198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-------------DTIVRLTPPLSISSN  264 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------------~~~lRi~~~~~~t~~  264 (306)
                      ++..... ++....+..|.++|+.++..  ..+..++++.|.++||.+.|+.             .+++|++++.  +++
T Consensus       323 ~~~l~~~-~~~~~~~~~g~~~~~~~~~~--~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~--~~~  397 (417)
T 3g7q_A          323 RRYLSEE-RCLIHKPEGAIFLWLWFKDL--PITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP--EPD  397 (417)
T ss_dssp             HHHCCTT-TCEEECCCBSSEEEEECTTC--SSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS--CHH
T ss_pred             HHhcccC-CceeeCCCcceEEEEEcCCC--CCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC--CHH
Confidence            6543221 12333456788888888641  2467889999999999998741             4699999763  999


Q ss_pred             HHHHHHHHHHHHHhhhcC
Q 021893          265 ELQEGSKALHDVLELDLP  282 (306)
Q Consensus       265 ~i~~~~~~l~~~l~~~~~  282 (306)
                      ++++++++|+++++ ++.
T Consensus       398 ~i~~~~~~l~~~l~-~~~  414 (417)
T 3g7q_A          398 KIEAGVKILAEEIE-RAW  414 (417)
T ss_dssp             HHHHHHHHHHHHHH-HHH
T ss_pred             HHHHHHHHHHHHHH-HHH
Confidence            99999999999998 653

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=99.89  E-value=1.2e-22  Score=181.73  Aligned_cols=251  Identities=16%  Similarity=0.177  Sum_probs=164.4

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+|++...+||+....+..........    |..+..   .+..++.+.+.+.   +++++++++.++|++|.+ .+.++
T Consensus        99 d~vl~~~p~y~~~~~~~~~~g~~~~~v----~~~~~~---~~~~l~~~~~~~~---~~~~~v~i~~p~nptG~~-~~~~~  167 (364)
T 1lc5_A           99 RRAMIVTPGFAEYGRALAQSGCEIRRW----SLREAD---GWQLTDAILEALT---PDLDCLFLCTPNNPTGLL-PERPL  167 (364)
T ss_dssp             SEEEEEESCCTHHHHHHHHTTCEEEEE----ECCGGG---TTCCCTTHHHHCC---TTCCEEEEESSCTTTCCC-CCHHH
T ss_pred             CeEEEeCCCcHHHHHHHHHcCCeEEEE----eCCccc---ccchhHHHHHhcc---CCCCEEEEeCCCCCCCCC-CCHHH
Confidence            578888999988665544332211100    111100   0000233333332   467777777778888865 57899


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhcccccccc-cc-cccCCCCCcEEEeccccc-CCcccceeeE-eCHHHHhhcCCCCccC
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRM-LA-SDWEEVRPDMVILGKALG-GGVIPVSAVL-ADKEVMLCIQPGEHGS  158 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~-~~-~~~~~~~~d~~s~sK~~~-~G~~~~g~~~-~~~~~~~~~~~~~~~~  158 (306)
                      +++|.++|++||+++|+||+|+++.+.+.. +. .+..+....+.|+||.++ +|+ |+||++ +++++++.+....  .
T Consensus       168 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~l~~~~--~  244 (364)
T 1lc5_A          168 LQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGL-RLGYLVNSDDAAMARMRRQQ--M  244 (364)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTT-CCEEEECCCHHHHHHHHHHS--C
T ss_pred             HHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCcc-ceEEEEECCHHHHHHHHHhC--C
Confidence            999999999999999999999977544322 21 122333444569999998 899 999999 8999888776422  3


Q ss_pred             CCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHH
Q 021893          159 TFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLK  237 (306)
Q Consensus       159 ~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~  237 (306)
                      +++.+++++.++.++++... -++..++++++++++.+.|++    .++. ...+..|.++++.++.     ...++++.
T Consensus       245 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~-~~~~~~g~~~~~~~~~-----~~~~l~~~  314 (364)
T 1lc5_A          245 PWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQ----LPLL-TVYPGRANYLLLRCER-----EDIDLQRR  314 (364)
T ss_dssp             TTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHT----STTE-EECCCSSSEEEEEESC-----TTCCHHHH
T ss_pred             CCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhc----CCCC-EECCCCCeEEEEECCC-----cHHHHHHH
Confidence            56778888888887776421 122344455555555555544    2222 2334567788887753     23468899


Q ss_pred             HHHCCceeccCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          238 MKERGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       238 l~~~Gi~~~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      |.++||.+.++.      ++++|+++   .+.++++++++.|+++++ ++
T Consensus       315 l~~~gi~v~~g~~~~~~~~~~iRis~---~~~~~~~~l~~~l~~~~~-~~  360 (364)
T 1lc5_A          315 LLTQRILIRSCANYPGLDSRYYRVAI---RSAAQNERLLAALRNVLT-GI  360 (364)
T ss_dssp             HHTTTEECEECTTSTTCCTTEEEEEC---CCHHHHHHHHHHHHHHC----
T ss_pred             HHHCCcEEeeCcccCCCCCCEEEEEe---CCHHHHHHHHHHHHHHhh-cc
Confidence            999999998752      57999994   368899999999998887 55

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=99.89  E-value=4.5e-22  Score=178.52  Aligned_cols=214  Identities=17%  Similarity=0.181  Sum_probs=151.9

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|+++|+++++   ++++++++++++|++|.+.+    +++|.++|++||+++|+|++|+..+.   .+..+.++.+..+
T Consensus       132 ~d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~~~~~~~~---~~~~~~~~~d~~~  201 (376)
T 3f0h_A          132 LTKEKLYEYDN---QNFTGLLVNVDETSTAVLYD----TMMIGEFCKKNNMFFVCDCVSAFLAD---PFNMNECGADVMI  201 (376)
T ss_dssp             CCHHHHHTTTT---SCCCEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTTTTS---CCCHHHHTCSEEE
T ss_pred             CCHHHHHHhhc---cCceEEEEecccCCcceecC----HHHHHHHHHHcCCEEEEEcCccccCc---cccccccCccEEE
Confidence            37899988765   57899999999999998887    99999999999999999999984322   2223344444556


Q ss_pred             EEecccccCCcccceeeEeCHHHHhhcCCCCc-----------------cCCCCCCHHHHHHHHHHHHHHhhc----cHH
Q 021893          125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEH-----------------GSTFGGNPLASAVAIASLDVIRDE----KLA  183 (306)
Q Consensus       125 ~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~aa~~al~~~~~~----~~~  183 (306)
                      .+++|+++++. ++|++++++++++.+.+...                 ...++.+..++.++.++++.+.++    +..
T Consensus       202 ~s~~K~l~~~~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~  280 (376)
T 3f0h_A          202 TGSQKVLACPP-GISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEV  280 (376)
T ss_dssp             EETTTTTCCCS-SCEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred             ecCcccccCCC-ceEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHH
Confidence            67789999777 88999999998887754211                 113344555556777788877654    234


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC----CCCEEEEeC
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT----HDTIVRLTP  257 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~~~~lRi~~  257 (306)
                      ++.+++.+++++.|+++.     ..... ...+.++.+. +.   +.+..++.+.|.++ ||.+.++    ..+++|+++
T Consensus       281 ~~~~~~~~~l~~~L~~~~-----~~~~~~~~~~~~~~~~-~~---~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~  351 (376)
T 3f0h_A          281 ARIASQAADFRAKIKDLP-----FELVSESPANGVTSVH-PT---TANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGH  351 (376)
T ss_dssp             HHHHHHHHHHHHHTTTSS-----EEECCSSBBTTEEEEE-ES---SSCHHHHHHHHHHHSSEECEECCGGGTTTCEEEEC
T ss_pred             HHHHHHHHHHHHHHHHcC-----CccCccccCceEEEEe-CC---CCCHHHHHHHHHHhCCEEEecCccccCCCEEEEec
Confidence            445555555555554431     21111 1233333333 22   34678899999999 9999875    357899999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHh
Q 021893          258 PLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       258 ~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +..++++++++++++|+++++
T Consensus       352 ~~~~t~e~i~~~~~~l~~~l~  372 (376)
T 3f0h_A          352 IGALTHEDNTTLVNAFKDLQK  372 (376)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHH
Confidence            888999999999999999987

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.89  E-value=3.9e-23  Score=186.18  Aligned_cols=264  Identities=12%  Similarity=0.009  Sum_probs=179.0

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCC----CCc-ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLL----PGH-LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVI   76 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~   76 (306)
                      +.+||+++.+|||.....+...........+-+..    .++ ..+...|+++++++++++  ++++|+++++++++|.+
T Consensus        74 gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~--~~~~v~~~~~~~~~G~~  151 (379)
T 3ke3_A           74 DEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKED--KSAIVYAPHVETSSGII  151 (379)
T ss_dssp             TCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHH--TCSEEEEESEETTTTEE
T ss_pred             CCeEEEEeCCchhHHHHHHHHHhCCCCceEEEeccccccccccCCCCCCCHHHHHHHHhhc--CCcEEEEEeecCCCcee
Confidence            57899999999997543332211000000000000    000 011246899999999753  57788898889999965


Q ss_pred             cCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCC-
Q 021893           77 IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-  155 (306)
Q Consensus        77 ~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~-  155 (306)
                      . +.+++++|.++|++||+++|+|++++  |  +..+....++.+..+.+++|+++++. ++|++++++++++.+.+.. 
T Consensus       152 ~-~~~~l~~i~~~~~~~~~~li~D~~~~--g--~~~~~~~~~~~d~~~~s~~K~l~~~~-g~g~~~~~~~~~~~l~~~~~  225 (379)
T 3ke3_A          152 L-SEEYIKALSEAVHSVGGLLVIDCIAS--G--CVWLDMKELGIDVLISAPQKGWSSTP-CAGLVMLSAAAIKKVESTES  225 (379)
T ss_dssp             C-CHHHHHHHHHHHHHTTCEEEEECTTC--T--TCCCCHHHHTCSEEEECTTTTTCSCC-CEEEEEECHHHHHHHHTCCC
T ss_pred             C-CHHHHHHHHHHHHHcCCEEEEEeccc--C--CccccccccCCCEEEecchhhcCCCC-ceEEEEECHHHHHhhhcCCC
Confidence            4 68899999999999999999999986  2  33444455565555556779999877 8999999999887765411 


Q ss_pred             --c-----------------c--CCCCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhCCCceeeE
Q 021893          156 --H-----------------G--STFGGNPLASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEV  211 (306)
Q Consensus       156 --~-----------------~--~~~~~~~~~~~aa~~al~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~  211 (306)
                        .                 .  ..++.+...++++.++++.+.++   ++.++.+++.+++++.|++++..   .....
T Consensus       226 ~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~g~~---~~~~~  302 (379)
T 3ke3_A          226 NCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDKGIE---SVAAE  302 (379)
T ss_dssp             SCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC---BSBCT
T ss_pred             CceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCE---ecCCc
Confidence              0                 0  12366777888888999888654   56778888888898888886322   11111


Q ss_pred             -EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC---------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          212 -RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---------DTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       212 -~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                       ...+.+..+..+.    .. ..+.+.|.++||.+.++.         .+.+|++++..+|++||+.++++|+++++ ++
T Consensus       303 ~~~~~~i~~~~~~~----~~-~~~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~-~~  376 (379)
T 3ke3_A          303 GFEAPGVVVSYTER----DD-MHKGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALD-EV  376 (379)
T ss_dssp             TCBCSSEEEEECSC----HH-HHSSHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHH-HH
T ss_pred             cccCceEEEEccCC----cc-hHHHHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHH-Hh
Confidence             1122333333321    12 223778899999988763         67999999999999999999999999998 65


Q ss_pred             C
Q 021893          282 P  282 (306)
Q Consensus       282 ~  282 (306)
                      .
T Consensus       377 ~  377 (379)
T 3ke3_A          377 L  377 (379)
T ss_dssp             H
T ss_pred             c
Confidence            3

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=99.89  E-value=5.9e-23  Score=183.54  Aligned_cols=198  Identities=17%  Similarity=0.196  Sum_probs=149.0

Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccce
Q 021893           61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVS  139 (306)
Q Consensus        61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~g  139 (306)
                      +++++++.++|++|.+.+    ++++.++|+++|+++|+||+|++|...+.....+..+....+.|+||.++ +|+ |+|
T Consensus       150 ~~~v~i~~p~nptG~~~~----~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~-r~G  224 (360)
T 3hdo_A          150 GKVFFLTTPNAPLGPSFP----LEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGM-RIG  224 (360)
T ss_dssp             SSEEEEESSCTTTCCCCC----HHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTS-CCE
T ss_pred             CCEEEEeCCCCCCCCCcC----HHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCcc-cee
Confidence            457888888999999988    89999999999999999999997633222111233344455669999998 899 999


Q ss_pred             eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893          140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN  218 (306)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~  218 (306)
                      |+++++++++.+....  ..+..+++++.++.++++.... ++..++++++.+++++.|++..     .. ..+..|.++
T Consensus       225 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~-----~~-~~~~~~~~~  296 (360)
T 3hdo_A          225 LAIARPEVIAALDKIR--DHYNLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSIG-----YD-VIPSQGNYL  296 (360)
T ss_dssp             EEECCHHHHHHHHHHS--CSCCSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTT-----CE-ECCCSSSEE
T ss_pred             eEeeCHHHHHHHHHhC--CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-----CE-EcCCCccEE
Confidence            9999999988876532  3467889999998888875221 3456666777777777776651     22 235567777


Q ss_pred             EEEEecCCChhhHHHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          219 AVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       219 ~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ++.++.    .+..++.+.|.++||.+.++.    ++++|++++   +++|+++++++|+++.+
T Consensus       297 ~~~~~~----~~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~e~~~l~~al~~~~~  353 (360)
T 3hdo_A          297 FATPPD----RDGKRVYDGLYARKVLVRHFSDPLLAHGMRISIG---TREEMEQTLAALKEIGE  353 (360)
T ss_dssp             EEECTT----CCHHHHHHHHHHTTEECBCCCSTTTTTSEEEECC---CHHHHHHHHHHHHHHHC
T ss_pred             EEECCC----CCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHhc
Confidence            876552    467889999999999998854    489999954   89999999999988876

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=99.89  E-value=7e-22  Score=178.01  Aligned_cols=214  Identities=14%  Similarity=0.118  Sum_probs=149.0

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc--cccc---------ccc
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA--RSGR---------MLA  114 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~--~~g~---------~~~  114 (306)
                      |+++|+++++++  +++++++++++|++|.+.+    +++|.++|++||+++|+||+|+++.  ..+.         .+.
T Consensus       159 d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~  232 (397)
T 3f9t_A          159 DEKFVKDAVEDY--DVDGIIGIAGTTELGTIDN----IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFD  232 (397)
T ss_dssp             CHHHHHHHHHHS--CCCEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCS
T ss_pred             CHHHHHHHHhhc--CCeEEEEECCCCCCCCCCC----HHHHHHHHHHhCCeEEEEccccchhhhhccccccccccccccc
Confidence            899999999853  6788888888999998877    9999999999999999999998642  2222         222


Q ss_pred             cccCCCCCcEEEecccccCCcccceeeEeCHH-HHhhcCC---CCcc--------CCCCCCHHHHHHHHHHHHHHhhccH
Q 021893          115 SDWEEVRPDMVILGKALGGGVIPVSAVLADKE-VMLCIQP---GEHG--------STFGGNPLASAVAIASLDVIRDEKL  182 (306)
Q Consensus       115 ~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~-~~~~~~~---~~~~--------~~~~~~~~~~~aa~~al~~~~~~~~  182 (306)
                      ... +....+.+++|.+++|. ++|+++++++ +.+.+..   ....        .....+..++.++...+....-++.
T Consensus       233 ~~~-~~~~~~~s~~K~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~  310 (397)
T 3f9t_A          233 FSL-GVDSITIDPHKMGHCPI-PSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKI  310 (397)
T ss_dssp             GGG-TCSEEECCTTTTTCCCS-SCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccc-cCCeEEEccccccCCCC-CceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHhHHHHHHH
Confidence            222 34444457779988888 9999888654 5444421   1111        1111133444444444432222446


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-CCEEEEeCCCCC
Q 021893          183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-DTIVRLTPPLSI  261 (306)
Q Consensus       183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~~lRi~~~~~~  261 (306)
                      .++.+++++++.+.|++..  +   .......+.++++.++      ...++.+.|.++||.+.++. ++++|++++..+
T Consensus       311 ~~~~~~~~~~l~~~L~~~g--~---~~~~~~~~~~~~~~~~------~~~~~~~~l~~~gi~v~~~~~~~~~Ri~~~~~~  379 (397)
T 3f9t_A          311 VNECMENTLYLYKKLKENN--F---KPVIEPILNIVAIEDE------DYKEVCKKLRDRGIYVSVCNCVKALRIVVMPHI  379 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHTT--C---CBSSCCSSSEEEEECT------THHHHHHHHHHTTCBCEECSSSSEEEEECCTTC
T ss_pred             HHHHHHHHHHHHHHHHHCC--C---EEEcCCCccEEEEEeC------CHHHHHHHHHhCCeEEeccCCCCEEEEEEcCCC
Confidence            7777888888888888762  2   1111244556666544      26789999999999999875 589999999889


Q ss_pred             CHHHHHHHHHHHHHHHh
Q 021893          262 SSNELQEGSKALHDVLE  278 (306)
Q Consensus       262 t~~~i~~~~~~l~~~l~  278 (306)
                      +++++++++++|+++++
T Consensus       380 ~~e~i~~~~~~l~~~l~  396 (397)
T 3f9t_A          380 KREHIDNFIEILNSIKR  396 (397)
T ss_dssp             CHHHHHHHHHHHHHHC-
T ss_pred             CHHHHHHHHHHHHHhhC
Confidence            99999999999998875

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=99.81  E-value=8.1e-25  Score=197.93  Aligned_cols=222  Identities=12%  Similarity=0.105  Sum_probs=157.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc----ccccc--CC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM----LASDW--EE  119 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~----~~~~~--~~  119 (306)
                      |++.|++.+++  ++++++++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++.+.|..    +.+..  .+
T Consensus       152 d~~~l~~~l~~--~~~~~v~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~  228 (392)
T 3b1d_A          152 DFEQLENDIVE--NDVKLYLLCNPHNPGGRV-WEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKD  228 (392)
Confidence            67888888874  357788888889999965 57889999999999999999999999987665532    11221  33


Q ss_pred             CCCcEEEeccccc-CCcccceeeEeCH-HHHhhcCCCCccCCC-CCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 021893          120 VRPDMVILGKALG-GGVIPVSAVLADK-EVMLCIQPGEHGSTF-GGNPLASAVAIASLDVIRD--EKLAERSAHLGEELR  194 (306)
Q Consensus       120 ~~~d~~s~sK~~~-~G~~~~g~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~  194 (306)
                      ..+++.|+||.++ +|+ |+||+++++ ++++.+.......++ +.+++++.++.++++....  ++..++++++.+.+.
T Consensus       229 ~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~  307 (392)
T 3b1d_A          229 FALVLSSATKTFNIAGT-KNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAV  307 (392)
Confidence            4566779999998 999 999999864 588888765444433 4577888888888764321  334555666666666


Q ss_pred             HHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHH
Q 021893          195 QHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQ  267 (306)
Q Consensus       195 ~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~  267 (306)
                      +.|++.   +++.....+..+.++|+.++..  ..+..++++.|+ ++||.+.|+      +++++|+++  ..++++++
T Consensus       308 ~~l~~~---~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~--~~~~e~i~  380 (392)
T 3b1d_A          308 EYFAQE---APRLKVMKPQGTYLIWLDFSDY--GLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNI--AAPKSLVE  380 (392)
Confidence            666552   1112222334455556777631  135667899997 789999875      357899994  45688999


Q ss_pred             HHHHHHHHHHh
Q 021893          268 EGSKALHDVLE  278 (306)
Q Consensus       268 ~~~~~l~~~l~  278 (306)
                      +++++|+++++
T Consensus       381 ~~l~~l~~~l~  391 (392)
T 3b1d_A          381 EICKRIVCCLP  391 (392)
Confidence            99999988775

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=99.89  E-value=6.9e-23  Score=186.32  Aligned_cols=255  Identities=11%  Similarity=0.104  Sum_probs=170.1

Q ss_pred             ceEEEEecCCCCcccchhcccCC-ccccccCCCCCC-CcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCCh
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCD-NEAIRGFGPLLP-GHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPD   80 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~   80 (306)
                      .+|++.+.+||+....+...... ....    |..+ ...   ..|+++|++.++++++++++++++.++|++|. +.+.
T Consensus       131 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~----~~~~~~~~---~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~-~~~~  202 (412)
T 1ajs_A          131 TPVYVSSPTWENHNGVFTTAGFKDIRSY----RYWDTEKR---GLDLQGFLSDLENAPEFSIFVLHACAHNPTGT-DPTP  202 (412)
T ss_dssp             SCEEEEESCCTHHHHHHHHTTCSCEEEE----ECEETTTT---EECHHHHHHHHHHSCTTCEEEEESSSCTTTCC-CCCH
T ss_pred             CeEEEcCCCcHHHHHHHHHcCCceeEEE----eeecCCCC---ccCHHHHHHHHHhCCCCcEEEEECCCCCCCCC-CCCH
Confidence            57889999998865554433322 1110    1100 000   12799999999876557888888888999986 5689


Q ss_pred             hHHHHHHHHHHHcCCEEEEehhhhcccccc---cccccccC-CCC---CcEEEecccccC-CcccceeeEe---CHHH--
Q 021893           81 GYLKAVRDLCSKYNILMIADEIQSGLARSG---RMLASDWE-EVR---PDMVILGKALGG-GVIPVSAVLA---DKEV--  147 (306)
Q Consensus        81 ~~l~~i~~l~~~~gi~li~De~~~g~~~~g---~~~~~~~~-~~~---~d~~s~sK~~~~-G~~~~g~~~~---~~~~--  147 (306)
                      +.+++|.++|++||+++|+||+|.++++.|   ...++..+ ...   ..+.|+||.+++ |+ |+||+++   ++++  
T Consensus       203 ~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~~~~~~~~  281 (412)
T 1ajs_A          203 EQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNE-RVGNLTVVAKEPDSIL  281 (412)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGG-CEEEEEEECSSHHHHH
T ss_pred             HHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCc-ceEEEEEecCCHHHHH
Confidence            999999999999999999999999887665   32222211 111   225699999996 99 9999998   8874  


Q ss_pred             --HhhcCCCCccCCCC-CCHHHHHHHHHHHHHHh--------hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893          148 --MLCIQPGEHGSTFG-GNPLASAVAIASLDVIR--------DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL  216 (306)
Q Consensus       148 --~~~~~~~~~~~~~~-~~~~~~~aa~~al~~~~--------~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~  216 (306)
                        ++.+... ...++. .+++++.++.++++...        .++..++++++++++.+.|+++.... ......+..|.
T Consensus       282 ~~~~~~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~  359 (412)
T 1ajs_A          282 RVLSQMQKI-VRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPG-TWNHITDQIGM  359 (412)
T ss_dssp             HHHHHHHHH-HHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS-CCHHHHHCCSS
T ss_pred             HHHHHHHHH-HhcccCCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-CeeEEcCCCce
Confidence              3333321 223343 47888888888887542        14466777778888888887753000 01112234556


Q ss_pred             EEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          217 FNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       217 ~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ++|+.++       ...+.+.+.++||.+.++    +|++++. .+++++++++++|+++++ ++
T Consensus       360 ~~~~~~~-------~~~~~~~l~~~gv~v~~~----~Ris~~~-~~~~~i~~~~~~l~~~l~-~~  411 (412)
T 1ajs_A          360 FSFTGLN-------PKQVEYLINQKHIYLLPS----GRINMCG-LTTKNLDYVATSIHEAVT-KI  411 (412)
T ss_dssp             EEECCCC-------HHHHHHHHHTTCEECCTT----SEEEGGG-CCTTTHHHHHHHHHHHHH-HC
T ss_pred             EEEeCCC-------HHHHHHHHHhCCEEecCC----cEEEeee-CCHHHHHHHHHHHHHHHH-hc
Confidence            6554332       334455566889999875    6999763 489999999999999988 64

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=99.89  E-value=3e-22  Score=182.01  Aligned_cols=218  Identities=15%  Similarity=0.089  Sum_probs=160.4

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |+++|++++++.  ++++|++++++|++|.+.+    +++|.++|++||+++|+|++|+. +.  ..+....  ..+|++
T Consensus       124 d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~~-~~--~~~~~~~--~~~d~~  192 (416)
T 3isl_A          124 DPEDIIREIKKV--KPKIVAMVHGETSTGRIHP----LKAIGEACRTEDALFIVDAVATI-GG--CEVKVDE--WKIDAA  192 (416)
T ss_dssp             CHHHHHHHHHHH--CCSEEEEESEETTTTEECC----CHHHHHHHHHTTCEEEEECTTTT-TT--SCCCTTT--TTCSEE
T ss_pred             CHHHHHHHHhhC--CCcEEEEEccCCCCceecC----HHHHHHHHHHcCCEEEEECCccc-cC--CCcchhh--cCCCEE
Confidence            899999999852  5789999999999998887    99999999999999999999972 11  1122222  345665


Q ss_pred             --EecccccCCcccceeeEeCHHHHhhcCCCC--------------------------------------ccCCCCCCHH
Q 021893          126 --ILGKALGGGVIPVSAVLADKEVMLCIQPGE--------------------------------------HGSTFGGNPL  165 (306)
Q Consensus       126 --s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~  165 (306)
                        +++|+++|+. ++|++++++++++.+.+..                                      .....+.+..
T Consensus       193 ~~s~~K~l~g~~-g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (416)
T 3isl_A          193 IGGTQKCLSVPS-GMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATT  271 (416)
T ss_dssp             ECCSSSTTCCCS-SEEEEEECHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHH
T ss_pred             EecCccccCCCC-CeEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHH
Confidence              5569988887 8999999999887765321                                      1112345677


Q ss_pred             HHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          166 ASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       166 ~~~aa~~al~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      ++.++.++++.+...   +..++++++++++.+.|++....   ..... ...+.++++.+++   ..+..++.+.|.++
T Consensus       272 ~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~---~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~L~~~  345 (416)
T 3isl_A          272 MLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAMGLR---LFGDDSCKMPVVTCVEIPG---GIDGESVRDMLLAQ  345 (416)
T ss_dssp             HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC---BCSCGGGBCTTEEEEECCT---TCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCE---eccCccccCCcEEEEeCCC---CCCHHHHHHHHHHh
Confidence            777777888776553   56778888888888888885211   11110 1235677777753   34678899999988


Q ss_pred             -CceeccC----CCCEEEEeCCCCCCHHH-HHHHHHHHHHHHhhhcC
Q 021893          242 -GILAKPT----HDTIVRLTPPLSISSNE-LQEGSKALHDVLELDLP  282 (306)
Q Consensus       242 -Gi~~~~~----~~~~lRi~~~~~~t~~~-i~~~~~~l~~~l~~~~~  282 (306)
                       ||.+.++    .++++|++++...++++ +++++++|+++++ ++.
T Consensus       346 ~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~-~~~  391 (416)
T 3isl_A          346 FGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLL-RHN  391 (416)
T ss_dssp             HCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHH-HTT
T ss_pred             CCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHH-HcC
Confidence             9999864    46899999866666666 9999999999999 764

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=99.88  E-value=1.6e-22  Score=184.15  Aligned_cols=225  Identities=12%  Similarity=0.097  Sum_probs=155.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc----cc-ccccCCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR----ML-ASDWEEV  120 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~----~~-~~~~~~~  120 (306)
                      |+++|++.++   +++++++++.++|++|.+ .+++.+++|.++|++||++||+||+|+++.+.|.    .+ +...+..
T Consensus       166 d~~~l~~~l~---~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~  241 (416)
T 1bw0_A          166 DLDEIRRLKD---DKTKLLIVTNPSNPCGSN-FSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFET  241 (416)
T ss_dssp             CHHHHHHHCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCC
T ss_pred             CHHHHHHHhc---cCCeEEEEeCCCCCCCcc-cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccC
Confidence            7999999887   457777777778889865 5799999999999999999999999998765554    22 2221111


Q ss_pred             C---CcEEEeccccc-CCcccceeeEeCHH--HHhhcCCC---CccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHH
Q 021893          121 R---PDMVILGKALG-GGVIPVSAVLADKE--VMLCIQPG---EHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAH  188 (306)
Q Consensus       121 ~---~d~~s~sK~~~-~G~~~~g~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~  188 (306)
                      .   ..+.|+||.++ +|+ |+||++++++  +++.+...   ....+++.+++++.++.++++....   ++..+++++
T Consensus       242 ~~~~i~~~s~sK~~~~~Gl-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  320 (416)
T 1bw0_A          242 TVPRVILGGTAKNLVVPGW-RLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEE  320 (416)
T ss_dssp             SCCEEEEEESTTTTSCGGG-CCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHH
T ss_pred             CCcEEEEecchhhCCCCCc-eEEEEEeeCchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence            1   22448999987 799 9999998653  33332210   0113566788888888888874221   234556666


Q ss_pred             HHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC--ChhhHHHHHHHHH-HCCceeccCC----CCEEEEeCCCCC
Q 021893          189 LGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA--LPVSAYDICLKMK-ERGILAKPTH----DTIVRLTPPLSI  261 (306)
Q Consensus       189 ~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~~~~~~~~l~-~~Gi~~~~~~----~~~lRi~~~~~~  261 (306)
                      +++++.+.|+++    ++.....+..|.++++.++...  ...+..++++.|+ ++||.+.++.    ++++|+++  ..
T Consensus       321 ~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~--~~  394 (416)
T 1bw0_A          321 SAMYLYNHIGEC----IGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTT--TR  394 (416)
T ss_dssp             HHHHHHHHHTTS----TTEEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEEC--CS
T ss_pred             HHHHHHHHHHhC----CCCcccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEe--cC
Confidence            666666666543    2222222345778888776310  0135678888885 7899998752    67999996  47


Q ss_pred             CHHHHHHHHHHHHHHHhhhcC
Q 021893          262 SSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       262 t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +++++++++++|.++++ +..
T Consensus       395 ~~e~l~~~l~~l~~~l~-~~~  414 (416)
T 1bw0_A          395 PVEVYREAVERIKAFCQ-RHA  414 (416)
T ss_dssp             CHHHHHHHHHHHHHHHH-HHB
T ss_pred             CHHHHHHHHHHHHHHHH-Hhh
Confidence            89999999999999998 644

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=99.88  E-value=4.3e-23  Score=187.10  Aligned_cols=211  Identities=14%  Similarity=0.113  Sum_probs=149.8

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccccCC----CCCcEEEeccccc-
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEE----VRPDMVILGKALG-  132 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~~~~----~~~d~~s~sK~~~-  132 (306)
                      +++++|++++++|++|.+ .+.+.+++|.++|+++|+++|+||+|+++++.+. ......++    ....+.|+||.++ 
T Consensus       162 ~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~  240 (400)
T 3asa_A          162 THIDILCLCSPNNPTGTV-LNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGF  240 (400)
T ss_dssp             CCCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTT
T ss_pred             cCccEEEEeCCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCC
Confidence            357788888889999965 5799999999999999999999999998765553 22222221    2234669999998 


Q ss_pred             CCcccceeeEeCHHH-------HhhcCCCCccCCC-CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhC
Q 021893          133 GGVIPVSAVLADKEV-------MLCIQPGEHGSTF-GGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQF  204 (306)
Q Consensus       133 ~G~~~~g~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  204 (306)
                      +|+ |+||+++++++       ++.+.......++ +.+.+++.++.++++....++..++++++++++++.|++..   
T Consensus       241 ~Gl-riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g---  316 (400)
T 3asa_A          241 AGI-RLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLATG---  316 (400)
T ss_dssp             TTC-CCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             cch-heeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHCC---
Confidence            999 99999998887       4444321122233 56888888888888765335577888888888888888751   


Q ss_pred             CCceeeEEEeeeEEEEE-EecCCChhhHHHHHHHHHHC-CceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          205 PNYVKEVRGRGLFNAVE-FDKTALPVSAYDICLKMKER-GILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       205 ~~~~~~~~~~g~~~~i~-~~~~~~~~~~~~~~~~l~~~-Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                        .....+..|.++|+. ++.   ..+..++++.|+++ ||.+.|+      +.+++|++  +..+++++++++++|+++
T Consensus       317 --~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis--~~~~~e~i~~~l~~l~~~  389 (400)
T 3asa_A          317 --FEVFGGEHAPYLWVKPTQA---NISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFS--SLGKREDILAACERLQMA  389 (400)
T ss_dssp             --CEEEECSSSSEEEEECCCT---TCCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEE--CCSCHHHHHHHHHHHHC-
T ss_pred             --CeeeCCCCceEEEEeccCC---CCCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEE--eeCCHHHHHHHHHHHHHH
Confidence              222222357788888 653   23345688888755 9999875      25789999  578999999999999998


Q ss_pred             HhhhcC
Q 021893          277 LELDLP  282 (306)
Q Consensus       277 l~~~~~  282 (306)
                      ++ +..
T Consensus       390 ~~-~~~  394 (400)
T 3asa_A          390 PA-LQS  394 (400)
T ss_dssp             ------
T ss_pred             HH-hhh
Confidence            88 554

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=99.88  E-value=4e-21  Score=174.68  Aligned_cols=216  Identities=17%  Similarity=0.199  Sum_probs=155.7

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|+++|+++++   +++++|++++++|++|.+.+    +++|.++|++||+++|+||+|+.. ..  .+....++  +|+
T Consensus       157 ~d~~~l~~~l~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~~~-~~--~~~~~~~~--~di  224 (420)
T 1t3i_A          157 FDLEHFKTLLS---EKTKLVTVVHISNTLGCVNP----AEEIAQLAHQAGAKVLVDACQSAP-HY--PLDVQLID--CDW  224 (420)
T ss_dssp             BCHHHHHHHCC---TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHTTCEEEEECTTTTT-TS--CCCHHHHT--CSE
T ss_pred             cCHHHHHHhhC---CCceEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEEhhhccC-Cc--cCchhhcC--CCE
Confidence            48999999987   47899999999999999887    999999999999999999999832 11  11222223  565


Q ss_pred             E--EecccccCCcccceeeEeCHHHHhhcCCCCccC--------------------CCCCCHHHHHHHH-HHHHHHhh--
Q 021893          125 V--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGS--------------------TFGGNPLASAVAI-ASLDVIRD--  179 (306)
Q Consensus       125 ~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~aa~-~al~~~~~--  179 (306)
                      +  |+||.++ +. ++|++++++++++.+.+.....                    ....+.+.+.++. ++++.+.+  
T Consensus       225 ~~~s~sK~~~-~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~  302 (420)
T 1t3i_A          225 LVASGHKMCA-PT-GIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLG  302 (420)
T ss_dssp             EEEEGGGTTS-CT-TCEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHC
T ss_pred             EEEehhhhcC-CC-ceEEEEEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhH
Confidence            5  6669554 44 5899999999998887653321                    1223445444444 46777654  


Q ss_pred             -ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE-----EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----
Q 021893          180 -EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR-----GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-----  248 (306)
Q Consensus       180 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-----~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----  248 (306)
                       +++.++.+++.+++.+.|+++    ++.....+     ..+.++.+.++.    .+..++.+.|.++||.+.++     
T Consensus       303 ~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~v~~~~~~~~  374 (420)
T 1t3i_A          303 MENIHNYEVELTHYLWQGLGQI----PQLRLYGPNPKHGDRAALASFNVAG----LHASDVATMVDQDGIAIRSGHHCTQ  374 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTC----TTEEEESCCGGGSCBCSEEEEEETT----BCHHHHHHHHHTTTEECBCSCTTCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhC----CCeEEeCCCccccccCCEEEEEECC----CCHHHHHHHHHHCCeEEeeccccch
Confidence             345677777777777777664    11221112     136777777652    35678899999999999986     


Q ss_pred             ------C-CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          249 ------H-DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       249 ------~-~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                            + .+++|++++..+++++++.++++|+++++ .+.+
T Consensus       375 ~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~-~~~~  415 (420)
T 1t3i_A          375 PLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIR-FFSD  415 (420)
T ss_dssp             HHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHH-HTC-
T ss_pred             HHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHH-HhcC
Confidence                  2 67999999888899999999999999998 7754

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=99.88  E-value=1.4e-21  Score=176.48  Aligned_cols=215  Identities=15%  Similarity=0.132  Sum_probs=160.3

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|+++|++.++++  ++++|++++++|++|.+.+    +++|.++|++||+++|+||+|+ ++..  .+  +.....+|+
T Consensus       146 ~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~-~g~~--~~--~~~~~~~di  214 (393)
T 1vjo_A          146 FSLEELRTALETH--RPAILALVHAETSTGARQP----LEGVGELCREFGTLLLVDTVTS-LGGV--PI--FLDAWGVDL  214 (393)
T ss_dssp             CCHHHHHHHHHHH--CCSEEEEESEETTTTEECC----CTTHHHHHHHHTCEEEEECTTT-TTTS--CC--CTTTTTCSE
T ss_pred             CCHHHHHHHHhhC--CceEEEEeccCCCcceecc----HHHHHHHHHHcCCEEEEECCcc-ccCc--CC--cccccCccE
Confidence            5899999999853  5778999999999998887    9999999999999999999998 4322  22  222345676


Q ss_pred             E--EecccccCCcccceeeEeCHHHHhhcCCC-------Cc------------cCCC-CCCHHHHHHHHHHHHHHhh---
Q 021893          125 V--ILGKALGGGVIPVSAVLADKEVMLCIQPG-------EH------------GSTF-GGNPLASAVAIASLDVIRD---  179 (306)
Q Consensus       125 ~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~-------~~------------~~~~-~~~~~~~~aa~~al~~~~~---  179 (306)
                      +  |++|+++++. ++|++++++++++.+...       ..            ...+ +.+.+.+.++.++++.+.+   
T Consensus       215 ~~~s~sK~l~~~~-~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~  293 (393)
T 1vjo_A          215 AYSCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGL  293 (393)
T ss_dssp             EECCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCH
T ss_pred             EEEcCcccccCCC-ceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccH
Confidence            6  4559999887 999999999988876321       00            1233 5688888888899988644   


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE--eeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC----CCCE
Q 021893          180 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG--RGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT----HDTI  252 (306)
Q Consensus       180 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~--~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~~~~  252 (306)
                      ++..++++++++++.+.|+++.  +. .. ...+  .+.++++.++.   +.+..++++.|.++ ||.+.++    .+++
T Consensus       294 ~~~~~~~~~~~~~l~~~L~~~g--~~-~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~  366 (393)
T 1vjo_A          294 ANCWQRHQKNVEYLWERLEDIG--LS-LH-VEKEYRLPTLTTVCIPD---GVDGKAVARRLLNEHNIEVGGGLGELAGKV  366 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT--CC-BS-SCGGGBCSSEEEEECCT---TCCHHHHHHHHHHHHCEECEECCGGGTTTE
T ss_pred             HHHHHHHHHHHHHHHHHHHHcC--Cc-cc-CCccccCCcEEEEEcCC---CCCHHHHHHHHHhhCCEEEecCccccCCCE
Confidence            3567888888899998888762  21 11 1111  23556666653   34577899999998 9999875    3689


Q ss_pred             EEEeC-CCCCCHHHHHHHHHHHHHHHh
Q 021893          253 VRLTP-PLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       253 lRi~~-~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +|+++ +...+++++++++++|+++++
T Consensus       367 iRis~~~~~~~~~~i~~~~~~l~~~l~  393 (393)
T 1vjo_A          367 WRVGLMGFNSRKESVDQLIPALEQVLR  393 (393)
T ss_dssp             EEEECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred             EEEeCCccCChHHHHHHHHHHHHHHhC
Confidence            99995 455678889999999998763

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=99.88  E-value=5.9e-23  Score=185.62  Aligned_cols=248  Identities=12%  Similarity=0.066  Sum_probs=162.7

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC---C----CHHHHHHHHHhcCCcEEEEEEccccCCCC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF---G----DITALEKIFKESGDQIAGFLFEPIQGEAG   74 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----d~~~le~~i~~~~~~~~~v~v~~~~~~~G   74 (306)
                      +.+|++...+||+....+......             +..+|.   +    |++.|++.++++++++++++++.++|++|
T Consensus       120 gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG  186 (396)
T 2q7w_A          120 VKRVWVSNPSWPNHKSVFNSAGLE-------------VREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG  186 (396)
T ss_dssp             CCEEEEEESCCTHHHHHHHHTTCE-------------EEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTC
T ss_pred             CCEEEEcCCCchhHHHHHHHcCCc-------------eEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCC
Confidence            356788888887765444332221             122222   2    79999999986544588888899999999


Q ss_pred             cccCChhHHHHHHHHHHHcCCEEEEehhhhcccccc--cccccccC----CCCCcEEEeccccc-CCcccceeeEe---C
Q 021893           75 VIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG--RMLASDWE----EVRPDMVILGKALG-GGVIPVSAVLA---D  144 (306)
Q Consensus        75 ~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g--~~~~~~~~----~~~~d~~s~sK~~~-~G~~~~g~~~~---~  144 (306)
                      . +.+.+.+++|.++|++||+++|+||+|+++++.+  ...++..+    .....+.|+||.++ +|+ |+||+++   +
T Consensus       187 ~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~~~  264 (396)
T 2q7w_A          187 I-DPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNE-RVGACTLVAAD  264 (396)
T ss_dssp             C-CCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGG-CCEEEEEECSS
T ss_pred             C-CCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEecccccccccc-ccceEEEEcCC
Confidence            6 4679999999999999999999999999876543  22222211    11122558999999 899 9999986   5


Q ss_pred             H----HHHhhcCCCCccCCCCCCHHHHHHHHHHHHHH------h--hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE
Q 021893          145 K----EVMLCIQPGEHGSTFGGNPLASAVAIASLDVI------R--DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR  212 (306)
Q Consensus       145 ~----~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~------~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~  212 (306)
                      +    ++++.+...........+++++.++.++++..      .  .++..++++++++.+.+.|++..... ++....+
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~  343 (396)
T 2q7w_A          265 SETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANR-DFSFIIK  343 (396)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCS-CCTHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcceecC
Confidence            5    35444432111222234788888888777543      1  12345566777777777777653110 0111223


Q ss_pred             EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          213 GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       213 ~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      ..|.++|+.++       ...+.+.|.++||.+.++    +|++++. .+++++++++++|++++
T Consensus       344 ~~~~~~~~~~~-------~~~~~~~l~~~gv~v~~~----~Ris~~~-~~~e~i~~~~~~l~~~l  396 (396)
T 2q7w_A          344 QNGMFSFSGLT-------KEQVLRLREEFGVYAVAS----GRVNVAG-MTPDNMAPLCEAIVAVL  396 (396)
T ss_dssp             CCSSEEECCCC-------HHHHHHHHHHHCEECCTT----CEEEGGG-CCTTTHHHHHHHHHHHC
T ss_pred             CCceEEEecCC-------HHHHHHHHHhcCeeecCC----ceEEEee-cCHHHHHHHHHHHHhcC
Confidence            45666665432       245666677889999874    7999764 38999999999998763

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=99.88  E-value=2e-21  Score=175.29  Aligned_cols=220  Identities=15%  Similarity=0.107  Sum_probs=160.8

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|+++|++.+++. +++++|++++++|++|.+.+    +++|.++|++||+++|+||+|+ ++..  .+....+  .+|+
T Consensus       120 ~d~~~l~~~l~~~-~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~--~~~~~~~--~~d~  189 (392)
T 2z9v_A          120 IDPQAVADMLKAH-PEITVVSVCHHDTPSGTINP----IDAIGALVSAHGAYLIVDAVSS-FGGM--KTHPEDC--KADI  189 (392)
T ss_dssp             CCHHHHHHHHHHC-TTCCEEEEESEEGGGTEECC----HHHHHHHHHHTTCEEEEECTTT-BTTB--SCCGGGG--TCSE
T ss_pred             CCHHHHHHHHhcC-CCCcEEEEeccCCCCceecc----HHHHHHHHHHcCCeEEEEcccc-cCCc--ccccccc--cceE
Confidence            4899999999753 46889999999999998887    9999999999999999999997 2211  1222222  3455


Q ss_pred             E--EecccccCCcccceeeEeCHHHHhhcCCCC--------------------ccCCCCCCHHHHHHHHHHHHHHhhc--
Q 021893          125 V--ILGKALGGGVIPVSAVLADKEVMLCIQPGE--------------------HGSTFGGNPLASAVAIASLDVIRDE--  180 (306)
Q Consensus       125 ~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~aa~~al~~~~~~--  180 (306)
                      +  |++|+++++. ++|++++++++++.+++..                    .....+.+..++.++.++++.+.+.  
T Consensus       190 ~~~s~sK~~~~~~-g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~  268 (392)
T 2z9v_A          190 YVTGPNKCLGAPP-GLTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGP  268 (392)
T ss_dssp             EEECSSSTTCCCS-CCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCH
T ss_pred             EEecCcccccCCC-ceeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccH
Confidence            4  6679988777 8899999999887664311                    1112345666777777788776543  


Q ss_pred             -cHHHHHHHHHHHHHHHHHHHHhhCCCceeeE--EEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC----CCCE
Q 021893          181 -KLAERSAHLGEELRQHLFKIQQQFPNYVKEV--RGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT----HDTI  252 (306)
Q Consensus       181 -~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~~~~  252 (306)
                       +..++++++++++++.|+++  .+. .....  ...+.++++.++.   +.+..++.+.|.++ ||.+.++    ..++
T Consensus       269 ~~~~~~~~~~~~~l~~~L~~~--g~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~  342 (392)
T 2z9v_A          269 EAVWARHALTAKAMRAGVTAM--GLS-VWAASDSIASPTTTAVRTPD---GVDEKALRQAARARYGVVFSSGRGETLGKL  342 (392)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT--TCC-BSSSSGGGBCTTEEEEECCT---TCCHHHHHHHHHHHHCEECEECCGGGTTTE
T ss_pred             HHHHHHHHHHHHHHHHHHHHc--CCe-eccCCccccCCceEEEECCC---CCCHHHHHHHHHhcCCEEEecCCCCCCCCe
Confidence             46778888888888888875  221 11101  1246667777653   34577899999998 9999875    3689


Q ss_pred             EEEeCCC-CCCHHHHHHHHHHHHHHHhhhcC
Q 021893          253 VRLTPPL-SISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       253 lRi~~~~-~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +|+++.. .++++++++++++|+++++ ++.
T Consensus       343 lRi~~~~~~~~~~~i~~~~~~l~~~~~-~~~  372 (392)
T 2z9v_A          343 TRIGHMGPTAQPIYAIAALTALGGAMN-AAG  372 (392)
T ss_dssp             EEEECCGGGCSHHHHHHHHHHHHHHHH-HTT
T ss_pred             EEEeCcccccCHHHHHHHHHHHHHHHH-HcC
Confidence            9999644 7899999999999999998 764

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.87  E-value=2.6e-21  Score=175.95  Aligned_cols=248  Identities=16%  Similarity=0.139  Sum_probs=174.2

Q ss_pred             ceEEEEecCCCCcccchhc-ccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            3 AIIVSCCGCFHGRTLAAIS-MSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      .+||++...+|+.+..+.. +....  ..+     ..+..+|.  +++|+++|+   +++++|++++++|++|.+.+   
T Consensus       119 d~vii~~~~~~~~~~~~~~~~~~~~--~~g-----~~~~~v~~--~~~l~~~i~---~~~~~v~~~~~~nptG~~~~---  183 (416)
T 1qz9_A          119 RRVIVTETSNFPTDLYIAEGLADML--QQG-----YTLRLVDS--PEELPQAID---QDTAVVMLTHVNYKTGYMHD---  183 (416)
T ss_dssp             CCEEEEETTSCHHHHHHHHHHHHHH--CSS-----CEEEEESS--GGGHHHHCS---TTEEEEEEESBCTTTCBBCC---
T ss_pred             CcEEEEcCCCCCchHHHHHHHHHHh--cCC-----ceEEEeCc--HHHHHHHhC---CCceEEEEeccccCcccccC---
Confidence            3577777777775443221 11000  000     01234444  788888886   47899999999999999887   


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--EecccccCCcccc-eeeEeCHHHHhhcCCCCcc-
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPV-SAVLADKEVMLCIQPGEHG-  157 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~-g~~~~~~~~~~~~~~~~~~-  157 (306)
                       +++|.++|++||+++|+||+|+ ++...  +....+  .+|++  |++|.+++|. ++ |++++++++++.+.+.... 
T Consensus       184 -l~~i~~l~~~~~~~li~D~a~~-~g~~~--~~~~~~--~~d~~~~s~~K~l~~g~-~~~g~l~~~~~~~~~l~~~~~g~  256 (416)
T 1qz9_A          184 -MQALTALSHECGALAIWDLAHS-AGAVP--VDLHQA--GADYAIGCTYKYLNGGP-GSQAFVWVSPQLCDLVPQPLSGW  256 (416)
T ss_dssp             -HHHHHHHHHHHTCEEEEECTTT-TTTSC--CCHHHH--TCSEEEECSSSTTCCCT-TCCCEEEECTTTTTTSCCSCCCG
T ss_pred             -HHHHHHHHHHcCCEEEEEcccc-ccCcC--CChhhc--CCCEEEecCcccCCCCC-CCeEEEEECHHHHhccCCCcccc
Confidence             9999999999999999999997 22221  112222  35666  4569998888 88 9999999987777653211 


Q ss_pred             ----------------------CCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHh--hCCCceee
Q 021893          158 ----------------------STFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQ--QFPNYVKE  210 (306)
Q Consensus       158 ----------------------~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~--~~~~~~~~  210 (306)
                                            ...+.+..+++++.++++.+.+   +++.++++++++++.+.|++...  .+  .+..
T Consensus       257 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~--~~~~  334 (416)
T 1qz9_A          257 FGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHEL--TLVT  334 (416)
T ss_dssp             GGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCC--EECS
T ss_pred             CccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCe--EEeC
Confidence                                  1224577788888888888764   34678888889999999887632  11  1111


Q ss_pred             EE---EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCC-CCCCHHHHHHHHHHHHHHHhhhc
Q 021893          211 VR---GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPP-LSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       211 ~~---~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~-~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ..   ..+.++++.++      +..++.+.|.++||.+.....+++|++++ ..++++++++++++|+++++ +.
T Consensus       335 ~~~~~~~~~~~~~~~~------~~~~l~~~l~~~gi~~~~~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~-~~  402 (416)
T 1qz9_A          335 PREHAKRGSHVSFEHP------EGYAVIQALIDRGVIGDYREPRIMRFGFTPLYTTFTEVWDAVQILGEILD-RK  402 (416)
T ss_dssp             CSSGGGBCSEEEEECT------THHHHHHHHHTTTEECEEETTTEEEEECCTTTCCHHHHHHHHHHHHHHHH-HT
T ss_pred             CCCHHHcCCEEEEecC------CHHHHHHHHHhCCcEeccCCCCeEEEeCcccCCCHHHHHHHHHHHHHHHh-cc
Confidence            11   13566777654      25689999999999987766889999987 58899999999999999998 64

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=99.87  E-value=1e-21  Score=174.29  Aligned_cols=215  Identities=17%  Similarity=0.107  Sum_probs=159.2

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|++.|++.++++  ++++|++++++|++|.+.+    +++|.++|++||+++|+||+|+ ++...  +....+  .+|+
T Consensus       111 ~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~D~a~~-~~~~~--~~~~~~--~~d~  179 (353)
T 2yrr_A          111 VDPEAVARALKRR--RYRMVALVHGETSTGVLNP----AEAIGALAKEAGALFFLDAVTT-LGMLP--FSMRAM--GVDY  179 (353)
T ss_dssp             CCHHHHHHHHHHS--CCSEEEEESEETTTTEECC----HHHHHHHHHHHTCEEEEECTTT-TTTSC--CCHHHH--TCSE
T ss_pred             CCHHHHHHHHHhC--CCCEEEEEccCCCcceecC----HHHHHHHHHHcCCeEEEEcCcc-ccccc--cccccc--CceE
Confidence            4899999999853  5788999999999999887    9999999999999999999995 43221  222222  3465


Q ss_pred             E--EecccccCCcccceeeEeCHHHHhhcCC--C-------------CccCCCCCCHHHHHHHHHHHHHHhhc---cHHH
Q 021893          125 V--ILGKALGGGVIPVSAVLADKEVMLCIQP--G-------------EHGSTFGGNPLASAVAIASLDVIRDE---KLAE  184 (306)
Q Consensus       125 ~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~--~-------------~~~~~~~~~~~~~~aa~~al~~~~~~---~~~~  184 (306)
                      +  +++|+++++. ++|++++++++++.+..  .             .....++.+...+.++.++++.+.++   +..+
T Consensus       180 ~~~s~~K~~~~~~-g~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~  258 (353)
T 2yrr_A          180 AFTGSQKCLSAPP-GLAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARER  258 (353)
T ss_dssp             EECCTTSTTCCCS-SCEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred             EEecCcccccCCC-ceEEEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHH
Confidence            5  5569988777 78999999999887752  0             11223355777777777888876543   4577


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCC
Q 021893          185 RSAHLGEELRQHLFKIQQQFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPL  259 (306)
Q Consensus       185 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~  259 (306)
                      +++++++++++.|+++  .+  .+.... ..+.++++.++.   +.+..++.+.|.++||.+.++    .++++|++++.
T Consensus       259 ~~~~~~~~l~~~L~~~--g~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~  331 (353)
T 2yrr_A          259 RAREVYAWVLEELKAR--GF--RPYPKASPLPTVLVVRPPE---GVDADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMG  331 (353)
T ss_dssp             HHHHHHHHHHHHHHHT--TC--EESCSSSBCTTEEEEECCT---TCCHHHHHHHHHHTTEECEECCGGGTTTCEEEECSG
T ss_pred             HHHHHHHHHHHHHHHC--CC--ccccCccCCCeEEEEECCC---CCCHHHHHHHHHHCCEEEeCCccccCCCeEEEecCc
Confidence            7888888888888775  22  111111 145566777653   345778999999999999875    36789999877


Q ss_pred             CCCHHHHH-HHHHHHHHHHh
Q 021893          260 SISSNELQ-EGSKALHDVLE  278 (306)
Q Consensus       260 ~~t~~~i~-~~~~~l~~~l~  278 (306)
                      ..++++++ +++++|+++++
T Consensus       332 ~~~~~~~~~~~~~~l~~~l~  351 (353)
T 2yrr_A          332 EGARREAYQAFLKALDRALA  351 (353)
T ss_dssp             GGSCHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHh
Confidence            78899999 99999999876

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=99.87  E-value=2.1e-22  Score=181.94  Aligned_cols=246  Identities=13%  Similarity=0.070  Sum_probs=165.4

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC-------CCHHHHHHHHHhcCCcEEEEEEccccCCCCc
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-------GDITALEKIFKESGDQIAGFLFEPIQGEAGV   75 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~   75 (306)
                      .+|++...+||+....+.......             ..+|.       .|++.|++.+++++++++++++++++|++|.
T Consensus       118 d~vl~~~p~~~~~~~~~~~~g~~~-------------~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~  184 (394)
T 2ay1_A          118 LRVFVSDPTWPNHVSIMNFMGLPV-------------QTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGA  184 (394)
T ss_dssp             CCEEEEESCCHHHHHHHHHHTCCE-------------EEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCC
T ss_pred             CEEEEcCCCChhHHHHHHHcCCce-------------EEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCC
Confidence            567888888877654443332211             12222       2799999999865445788888999999996


Q ss_pred             ccCChhHHHHHHHHHHHcCCEEEEehhhhcccccc--cccccccC-CCCCc---EEEeccccc-CCcccceeeEe---CH
Q 021893           76 IIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG--RMLASDWE-EVRPD---MVILGKALG-GGVIPVSAVLA---DK  145 (306)
Q Consensus        76 ~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g--~~~~~~~~-~~~~d---~~s~sK~~~-~G~~~~g~~~~---~~  145 (306)
                       +.+.+.+++|.++|++||+++|+||+|+++++.+  ...++..+ ...++   +.|+||.++ +|+ |+||+++   ++
T Consensus       185 -~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~-riG~~~~~~~~~  262 (394)
T 2ay1_A          185 -NLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRE-RTGCLLALCADA  262 (394)
T ss_dssp             -CCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGG-CEEEEEEECSSH
T ss_pred             -CCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCC-ccceEEEEeCCH
Confidence             4679999999999999999999999999876543  11112211 11223   448999999 899 9999988   66


Q ss_pred             HHHhhcCCC---CccCCC-CCCHHHHHHHHHHHHHH--------hhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE
Q 021893          146 EVMLCIQPG---EHGSTF-GGNPLASAVAIASLDVI--------RDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG  213 (306)
Q Consensus       146 ~~~~~~~~~---~~~~~~-~~~~~~~~aa~~al~~~--------~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~  213 (306)
                      ++++.+...   ....++ ..+++++.++.++++..        ..++..++++++++++.+.|++..... ++....+.
T Consensus       263 ~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~  341 (394)
T 2ay1_A          263 ATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSD-RFGFVAEH  341 (394)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-TTTHHHHC
T ss_pred             HHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CeeEEcCC
Confidence            554332210   011233 34778888888777643        124466777888888888888765210 01112234


Q ss_pred             eeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          214 RGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       214 ~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      .|.++|+.++       ...+.+.|.++||.+.++    +|++++ .++++++++++++|+++
T Consensus       342 ~g~~~~~~~~-------~~~~~~~l~~~gi~v~~~----~Ris~~-~~~~~~i~~~~~~l~~~  392 (394)
T 2ay1_A          342 RGMFSRLGAT-------PEQVKRIKEEFGIYMVGD----SRINIA-GLNDNTIPILARAIIEV  392 (394)
T ss_dssp             CSSEEECCCC-------HHHHHHHHHHHCEECCTT----CEEEGG-GCCTTTHHHHHHHHHHH
T ss_pred             ceEEEeeCCC-------HHHHHHHHHhCCEEecCC----CeEEee-cCCHhhHHHHHHHHHHc
Confidence            5677666443       245677777899999875    699976 46899999999999875

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=99.87  E-value=8.2e-22  Score=185.09  Aligned_cols=224  Identities=11%  Similarity=0.119  Sum_probs=150.7

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH-HcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCS-KYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~-~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |+++|+++++   +++++|+++.++|++|.+ .+.+.+++|.++|+ +||+++|+||+|+++...+..+.....+....+
T Consensus       233 d~~~l~~~l~---~~~k~v~l~~p~NPtG~~-~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~  308 (533)
T 3f6t_A          233 EPNEIEKLKD---PSIKALIVVNPTNPTSKE-FDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLV  308 (533)
T ss_dssp             CHHHHHHHSC---TTEEEEEEESSCTTTCBC-CCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEE
T ss_pred             CHHHHHHHhC---CCCeEEEEeCCCCCCccc-cCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEE
Confidence            7899999886   578999988889999965 57888999999999 699999999999987543332211112334556


Q ss_pred             EEeccccc-CCcccceeeEeCHH-----HHhhc--------------------------------CCCCccCCCCCCHHH
Q 021893          125 VILGKALG-GGVIPVSAVLADKE-----VMLCI--------------------------------QPGEHGSTFGGNPLA  166 (306)
Q Consensus       125 ~s~sK~~~-~G~~~~g~~~~~~~-----~~~~~--------------------------------~~~~~~~~~~~~~~~  166 (306)
                      .|+||.+| +|+ |+||++++++     +++.+                                .......+.+.+.+.
T Consensus       309 ~S~SK~~g~~G~-RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~  387 (533)
T 3f6t_A          309 YSYSKLFGCTGW-RLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQ  387 (533)
T ss_dssp             EESHHHHTCGGG-CEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHH
T ss_pred             ecCcccCCCccc-ceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHH
Confidence            79999998 899 9999999776     54433                                333344455566666


Q ss_pred             HHHHH-HHHHHHh-------h----ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC----C---
Q 021893          167 SAVAI-ASLDVIR-------D----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA----L---  227 (306)
Q Consensus       167 ~~aa~-~al~~~~-------~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~----~---  227 (306)
                      +.++. .++..+.       .    ++..++++++.+.+.+.|.     . ++....+..|.++|+.++...    .   
T Consensus       388 q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-----~-~~~~~~~~~g~~~~~~l~~~~~~~~g~~~  461 (533)
T 3f6t_A          388 QIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-----A-PKDETDTNTHYYSLIDIYRLAEKIYGKEF  461 (533)
T ss_dssp             HHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-----C-CCCCSTTBCCSEEEEEHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-----C-CccccCCCceEEEEEehHhhhhhccchHH
Confidence            66521 1233332       1    2234445555555555553     2 233344567777887765200    0   


Q ss_pred             ------hhhHHHHHHHHH-HCCceeccC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          228 ------PVSAYDICLKMK-ERGILAKPT-----HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       228 ------~~~~~~~~~~l~-~~Gi~~~~~-----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                            ..+..+++..++ ++||.+.|+     +.+++|+++. ..+++++++++++|+++++ ++.
T Consensus       462 ~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a-~~~~e~i~~~i~~L~~~l~-~~~  526 (533)
T 3f6t_A          462 RDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQA-NLPTEDYALIGKQVLELLK-EYY  526 (533)
T ss_dssp             HHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESS-SSCHHHHHHHHHHHHHHHH-HHH
T ss_pred             HHHhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEe-eCCHHHHHHHHHHHHHHHH-HHH
Confidence                  013446666665 679999985     2689999963 3689999999999999998 754

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=99.87  E-value=1.7e-20  Score=170.07  Aligned_cols=209  Identities=16%  Similarity=0.105  Sum_probs=148.3

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |+++|++.++   +++++|++++++|++|.+.+    +++|.++|+++|+++|+||+|+. +..  .+....++.+..+.
T Consensus       154 d~~~l~~~l~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~~-g~~--~~~~~~~~~d~~~~  223 (406)
T 3cai_A          154 PTWQWESLIS---KSTRLVAVNSASGTLGGVTD----LRAMTKLVHDVGALVVVDHSAAA-PYR--LLDIRETDADVVTV  223 (406)
T ss_dssp             CGGGHHHHCC---TTEEEEEEESBCTTTCBBCC----CHHHHHHHHHTTCEEEEECTTTT-TTC--CCCHHHHCCSEEEE
T ss_pred             CHHHHHHHhC---CCceEEEEeCCcCCccccCC----HHHHHHHHHHcCCEEEEEccccc-CCC--CCCchhcCCCEEEe
Confidence            7899999887   57999999999999999888    99999999999999999999972 111  12222233322334


Q ss_pred             EecccccCCcccce-eeEeCHHHHhhcCCCCc---------cCCCCCCHHHHHHHHHHHHHHhh----------------
Q 021893          126 ILGKALGGGVIPVS-AVLADKEVMLCIQPGEH---------GSTFGGNPLASAVAIASLDVIRD----------------  179 (306)
Q Consensus       126 s~sK~~~~G~~~~g-~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~aa~~al~~~~~----------------  179 (306)
                      |++|.++  . ++| ++++++++++.+.+...         ....+.+..+++++.++++.+..                
T Consensus       224 s~~K~~g--~-~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~  300 (406)
T 3cai_A          224 NAHAWGG--P-PIGAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVS  300 (406)
T ss_dssp             EGGGGTS--C-SCEEEEESCHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHH
T ss_pred             ehhhhcC--C-CcCeEEEEehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhh
Confidence            6789765  3 478 89999999888876432         11334577777777778877654                


Q ss_pred             -ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE--EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-------
Q 021893          180 -EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR--GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-------  249 (306)
Q Consensus       180 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~--~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------  249 (306)
                       +++.++++++++++.+.|+++    ++.....+  ..+.++++.++.    .+..++.+.|.++||.+.++.       
T Consensus       301 ~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~L~~~gi~v~~g~~~~~~~~  372 (406)
T 3cai_A          301 MQSADAYLNRVFDYLMVSLRSL----PLVMLIGRPEAQIPVVSFAVHK----VPADRVVQRLADNGILAIANTGSRVLDV  372 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTC----TTEEECCCCSSBCSEEEEEETT----BCHHHHHHHHHHTTEECEECCSCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcC----CCeEEcCCccccCCEEEEEECC----cCHHHHHHHHHHCCcEEecCChHHHHHH
Confidence             234455566666666666553    22211111  124466776652    456789999999999998753       


Q ss_pred             ------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          250 ------DTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       250 ------~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                            .+++|++++..++++++++++++|++
T Consensus       373 ~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~  404 (406)
T 3cai_A          373 LGVNDVGGAVTVGLAHYSTMAEVDQLVRALAS  404 (406)
T ss_dssp             HTTTTTTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred             cCCCCCCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence                  37899999988899999999998875

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=99.86  E-value=8.1e-22  Score=179.30  Aligned_cols=220  Identities=14%  Similarity=0.110  Sum_probs=152.0

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccc---ccccc---ccCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG---RMLAS---DWEE  119 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g---~~~~~---~~~~  119 (306)
                      |++.|++.++++++.+++++++.++|++|. +.+.+.+++|.++|++||+++|+||+|.++.+.+   ...+.   ...+
T Consensus       162 d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  240 (412)
T 1yaa_A          162 DLNGFLNAIQKAPEGSIFVLHSCAHNPTGL-DPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKL  240 (412)
T ss_dssp             CHHHHHHHHHHSCTTCEEEEECSSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHT
T ss_pred             CHHHHHHHHHhCCCCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcC
Confidence            799999999875334677777889999995 4578999999999999999999999999875543   21112   1111


Q ss_pred             ----CCCcEEEecccccC-CcccceeeE--e-----CHH----HHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-----
Q 021893          120 ----VRPDMVILGKALGG-GVIPVSAVL--A-----DKE----VMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-----  178 (306)
Q Consensus       120 ----~~~d~~s~sK~~~~-G~~~~g~~~--~-----~~~----~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-----  178 (306)
                          ....+.|+||.+++ |+ |+||++  +     +++    +++.+...........+.+++.++.++++...     
T Consensus       241 ~~~~~~i~~~s~sK~~~~~Gl-riG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~  319 (412)
T 1yaa_A          241 STVSPVFVCQSFAKNAGMYGE-RVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQW  319 (412)
T ss_dssp             TTTCCEEEEEECTTTSCCGGG-CEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHH
T ss_pred             CCCcceEEEeccCCCCCCcCC-cceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHH
Confidence                12234589999996 99 999998  7     565    66666542223333457888888888887542     


Q ss_pred             ---hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEE
Q 021893          179 ---DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRL  255 (306)
Q Consensus       179 ---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi  255 (306)
                         .++..++++++++++.+.|++..... ++....+..|.++|+.++       ...+.+.+.++||.+.+    ++|+
T Consensus       320 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~gi~v~~----~~Ri  387 (412)
T 1yaa_A          320 HKDMVTMSSRITKMRHALRDHLVKLGTPG-NWDHIVNQCGMFSFTGLT-------PQMVKRLEETHAVYLVA----SGRA  387 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTCSS-CCTHHHHCCSSEEECCCC-------HHHHHHHHHHHCEECCT----TSEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCCC-CeeeeccCceEEEeeCCC-------HHHHHHHHHhCCEEecc----CcEE
Confidence               23456777788888888887764110 011122344555554322       34555555578999987    4899


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          256 TPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       256 ~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +++. .+++++++++++|+++++ .+
T Consensus       388 s~~~-~~~~~i~~~~~~l~~~~~-~~  411 (412)
T 1yaa_A          388 SIAG-LNQGNVEYVAKAIDEVVR-FY  411 (412)
T ss_dssp             EGGG-CCTTTHHHHHHHHHHHHH-HC
T ss_pred             EEcc-CCHhHHHHHHHHHHHHHH-hh
Confidence            9763 589999999999999887 53

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=99.86  E-value=4.7e-21  Score=172.88  Aligned_cols=220  Identities=11%  Similarity=0.089  Sum_probs=158.6

Q ss_pred             CCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc
Q 021893           44 FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        44 ~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d  123 (306)
                      ..|+++|++.++++  ++++|++++++|++|.+.+    +++|.++|++||+++|+||+|+ ++..  .+....  ..+|
T Consensus       130 ~~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~----l~~i~~~~~~~~~~li~D~a~~-~~~~--~~~~~~--~~~d  198 (393)
T 2huf_A          130 SLSLDEIRDALLIH--KPSVLFLTQGDSSTGVLQG----LEGVGALCHQHNCLLIVDTVAS-LGGA--PMFMDR--WEID  198 (393)
T ss_dssp             CCCHHHHHHHHHHH--CCSEEEEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-BTTB--CCCTTT--TTCS
T ss_pred             CCCHHHHHHHHhcc--CCcEEEEEccCCCccccCC----HHHHHHHHHHcCCEEEEEcccc-cCCC--Ccchhh--cCcc
Confidence            35899999999842  5788999999999998887    9999999999999999999986 3221  122222  3456


Q ss_pred             EE--EecccccCCcccceeeEeCHHHHhhcCCCC----c------------------c-CCCCCCHHHHHHHHHHHHHHh
Q 021893          124 MV--ILGKALGGGVIPVSAVLADKEVMLCIQPGE----H------------------G-STFGGNPLASAVAIASLDVIR  178 (306)
Q Consensus       124 ~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~----~------------------~-~~~~~~~~~~~aa~~al~~~~  178 (306)
                      ++  +++|+++|+. ++|++++++++++.+....    .                  . ...+.+..+++++.++++.+.
T Consensus       199 ~~~~s~sK~l~g~~-G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~  277 (393)
T 2huf_A          199 AMYTGSQKVLGAPP-GITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMAC  277 (393)
T ss_dssp             EEECCSSSTTCCCS-SCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHH
T ss_pred             EEEECCCcccccCC-CeEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHH
Confidence            66  5569988766 7799999999888765420    0                  0 112346667777777888764


Q ss_pred             h---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE--EeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC----
Q 021893          179 D---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR--GRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT----  248 (306)
Q Consensus       179 ~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~--~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----  248 (306)
                      +   ++..++++++++++++.|++++  +. .. ...  ..+.++++.++.   +.+..++.+.|+++ ||.+.++    
T Consensus       278 ~~~~~~~~~~~~~~~~~l~~~L~~~g--~~-~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~~~~gi~v~~g~~~~  350 (393)
T 2huf_A          278 EEGLPALIARHEDCAKRLYRGLQDAG--FE-LY-ADPKDRLSTVTTIKVPQ---GVDWLKAAQYAMKTYLVEISGGLGPT  350 (393)
T ss_dssp             HHCHHHHHHHHHHHHHHHHHHHHHTT--CC-BS-SCGGGBCTTEEEEECCT---TCCHHHHHHHHHHHHCEECBCCCGGG
T ss_pred             HhCHHHHHHHHHHHHHHHHHHHHHcC--Ce-ec-cCccccCCcEEEEEcCC---CCCHHHHHHHHHHhCCEEEecCcccc
Confidence            4   3467788888888888888762  21 11 111  134466776653   34577899999875 9999875    


Q ss_pred             CCCEEEEeC-CCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          249 HDTIVRLTP-PLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       249 ~~~~lRi~~-~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      ..+++|+++ +..++++++++++++|+++++ ++..
T Consensus       351 ~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~-~~~~  385 (393)
T 2huf_A          351 AGQVFRIGLMGQNATTERVDRVLQVFQEAVA-AVKP  385 (393)
T ss_dssp             TTTEEEEECCGGGCSHHHHHHHHHHHHHHHH-HHCC
T ss_pred             cCCEEEEEcccCcCCHHHHHHHHHHHHHHHH-HcCC
Confidence            367999998 445689999999999999998 7654

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.86  E-value=6.5e-21  Score=172.02  Aligned_cols=246  Identities=14%  Similarity=0.111  Sum_probs=161.1

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+|++...+||+.+........         .....+..++.+|++.|++.++   +++++|++++++|++|.+.+    
T Consensus        92 ~~vl~~~~~~~~~~~~~~~~~~---------~~g~~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----  155 (386)
T 1cs1_A           92 DLLVAPHDCYGGSYRLFDSLAK---------RGCYRVLFVDQGDEQALRAALA---EKPKLVLVESPSNPLLRVVD----  155 (386)
T ss_dssp             CEEEEETTCCHHHHHHHHHHHT---------TTSCEEEEECTTCHHHHHHHHH---TCCSEEEEECSCTTTCCCCC----
T ss_pred             CEEEEecCCcHhHHHHHHHHHH---------hcCCEEEEeCCCCHHHHHHhhc---cCCcEEEEeCCCCCCCcccC----
Confidence            5677777777764322111000         1112345566779999999998   47889999999999999887    


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccc-eeeEeCH-HHHhhcCCCCccCC
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPV-SAVLADK-EVMLCIQPGEHGST  159 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~-g~~~~~~-~~~~~~~~~~~~~~  159 (306)
                      +++|.++|++||+++|+||+|+++... ..  . .++.+..+.|++|.++ +|. ++ |++++++ ++++.+.+.....+
T Consensus       156 l~~i~~l~~~~~~~li~De~~~~~~~~-~~--~-~~~~di~~~s~sK~~~~~~~-~~~G~~~~~~~~l~~~l~~~~~~~~  230 (386)
T 1cs1_A          156 IAKICHLAREVGAVSVVDNTFLSPALQ-NP--L-ALGADLVLHSCTKYLNGHSD-VVAGVVIAKDPDVVTELAWWANNIG  230 (386)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTCTTTC-CG--G-GGTCSEEEEETTTTTTCSSC-CCCEEEEESSHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHcCCEEEEECCCcccccC-Cc--c-ccCceEEEEcCcccccCCCC-ceeEEEEeCcHHHHHHHHHHHHhcC
Confidence            999999999999999999999865322 11  1 2333344458999998 455 66 8999875 78777765433334


Q ss_pred             CCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhh----CCCce---------eeEEEeeeEEEEEEecCC
Q 021893          160 FGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQ----FPNYV---------KEVRGRGLFNAVEFDKTA  226 (306)
Q Consensus       160 ~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~----~~~~~---------~~~~~~g~~~~i~~~~~~  226 (306)
                      ...+++++.++..+++.+..  ..++..++.+.+.+.|+++...    ++...         ...++.|.++.+.+..  
T Consensus       231 ~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--  306 (386)
T 1cs1_A          231 VTGGAFDSYLLLRGLRTLVP--RMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG--  306 (386)
T ss_dssp             CBCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS--
T ss_pred             CCCCHHHHHHHHhcccHHHH--HHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC--
Confidence            55677777776666654422  3445555566666655553100    00000         0013357788887753  


Q ss_pred             ChhhHHHHHHHHHHCCceecc---C---------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          227 LPVSAYDICLKMKERGILAKP---T---------------------------HDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       227 ~~~~~~~~~~~l~~~Gi~~~~---~---------------------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                        . ...+.+.|.++||.+.+   +                           .++++|++++...++++++.+.+.|+++
T Consensus       307 --~-~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~  383 (386)
T 1cs1_A          307 --D-EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA  383 (386)
T ss_dssp             --C-HHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             --C-HHHHHHHHHhCCcceEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence              2 55778888889998863   1                           1579999999877777777777766654

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.86  E-value=5.6e-21  Score=169.67  Aligned_cols=211  Identities=16%  Similarity=0.059  Sum_probs=155.1

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc--CCEEEEehhhhcccccccccccccCCCCCc
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--NILMIADEIQSGLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~--gi~li~De~~~g~~~~g~~~~~~~~~~~~d  123 (306)
                      |+++|++      +++++|++++++|++|.+.+    +++|.++|++|  |+++|+||+|+ ++..  .+....+  .+|
T Consensus       113 d~~~l~~------~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~~~li~D~a~~-~~~~--~~~~~~~--~~d  177 (352)
T 1iug_A          113 RPEDVAK------EGYAGLLLVHSETSTGALAD----LPALARAFKEKNPEGLVGADMVTS-LLVG--EVALEAM--GVD  177 (352)
T ss_dssp             CTTTSCC------SSCSEEEEESEETTTTEECC----HHHHHHHHHHHCTTCEEEEECTTT-BTTB--CCCSGGG--TCS
T ss_pred             CHHHHhc------cCCcEEEEEEecCCcceecC----HHHHHHHHHhhCCCCEEEEECCcc-ccCc--ceecccc--Cee
Confidence            5566654      35788999999999999887    99999999999  99999999997 3221  1222222  345


Q ss_pred             EE--EecccccCCcccceeeEeCHHHHhhcCC-------------C-CccCCCCCCHHHHHHHHHHHHHHhhc--cHHHH
Q 021893          124 MV--ILGKALGGGVIPVSAVLADKEVMLCIQP-------------G-EHGSTFGGNPLASAVAIASLDVIRDE--KLAER  185 (306)
Q Consensus       124 ~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~-------------~-~~~~~~~~~~~~~~aa~~al~~~~~~--~~~~~  185 (306)
                      ++  +++|++.++. ++|++++++++++.+.+             . .....++.+...+.++.++++.+.+.  +..++
T Consensus       178 ~~~~s~~K~~~~~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~  256 (352)
T 1iug_A          178 AAASGSQKGLMCPP-GLGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPRLEEHLAL  256 (352)
T ss_dssp             EEEEESSSTTCCCS-CEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHH
T ss_pred             EEEecCcccccCCC-ceeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            54  6679888776 88999999987765321             0 11223456777888888888876553  56677


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCCC
Q 021893          186 SAHLGEELRQHLFKIQQQFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLS  260 (306)
Q Consensus       186 ~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~~  260 (306)
                      ++++++++.+.|+++  .   .....+ ..+.++++.+++   +.+..++.+.|.++||.+.++    ..+++|++++..
T Consensus       257 ~~~~~~~l~~~L~~~--g---~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~  328 (352)
T 1iug_A          257 KAWQNALLYGVGEEG--G---LRPVPKRFSPAVAAFYLPE---GVPYARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGA  328 (352)
T ss_dssp             HHHHHHHHHHHHHHT--T---CEESCSSBCTTCEEEECCT---TCCHHHHHHHHHTTTEECEECCGGGTTTEEEECCCSS
T ss_pred             HHHHHHHHHHHHHHC--C---CcccccccCCeEEEEEcCC---CCCHHHHHHHHHHCCEEEEeCCCccCCCEEEEEcccc
Confidence            788888888888775  1   111112 256778887763   345778999999999999876    368999999888


Q ss_pred             CCHHHHHHHHHHHHHHHhhhc
Q 021893          261 ISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       261 ~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ++++++++++++|+++++ ++
T Consensus       329 ~~~~~i~~~~~~l~~~~~-~~  348 (352)
T 1iug_A          329 YDRYEALGVAGMFREVLE-EI  348 (352)
T ss_dssp             CCHHHHHHHHHHHHHHHH-HH
T ss_pred             CCHHHHHHHHHHHHHHHH-Hh
Confidence            899999999999999988 65

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=99.85  E-value=3.3e-20  Score=169.05  Aligned_cols=214  Identities=15%  Similarity=0.188  Sum_probs=152.3

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |+++|+++++   +++++|++++++|++|.+.+    +++|.++|++||++||+||+|+.    |.. ..+.....+|++
T Consensus       152 d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~----~~~-~~~~~~~~~di~  219 (423)
T 3lvm_A          152 DLKELEAAMR---DDTILVSIMHVNNEIGVVQD----IAAIGEMCRARGIIYHVDATQSV----GKL-PIDLSQLKVDLM  219 (423)
T ss_dssp             CHHHHHHHCC---TTEEEEECCSBCTTTCBBCC----HHHHHHHHHHHTCEEEEECTTTT----TTS-CCCTTTSCCSEE
T ss_pred             CHHHHHHhcC---CCcEEEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEEhhhhc----CCC-CcChhhcCCCEE
Confidence            8999999997   47899999999999999888    99999999999999999999973    111 122223346666


Q ss_pred             --EecccccCCcccceeeEeCHHHHhhcCCCCc-------cCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 021893          126 --ILGKALGGGVIPVSAVLADKEVMLCIQPGEH-------GSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELR  194 (306)
Q Consensus       126 --s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~  194 (306)
                        |+||.+ |+. ++|+++++++.++.+.+...       ....+.+...+.++.++++.+..  +++.+++++++++++
T Consensus       220 ~~s~sK~~-g~~-g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~  297 (423)
T 3lvm_A          220 SFSGHKIY-GPK-GIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLW  297 (423)
T ss_dssp             EEESTTTT-SCS-SCEEEEECBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EechHHhc-CCC-CeEEEEEeccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              555954 454 68999999887777765432       22335577777777788877655  445666667777777


Q ss_pred             HHHHHHHhhCCCceeeEEE---eeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----------------------
Q 021893          195 QHLFKIQQQFPNYVKEVRG---RGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----------------------  249 (306)
Q Consensus       195 ~~L~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----------------------  249 (306)
                      +.|+++    ++.......   .+.++.+.+.    ..+..++.+.|.+  +.+.++.                      
T Consensus       298 ~~L~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~  367 (423)
T 3lvm_A          298 NGIKDI----EEVYLNGDLEHGAPNILNVSFN----YVEGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDEL  367 (423)
T ss_dssp             HHHTTS----TTEEEESCSTTBCTTEEEEEET----TSCHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHH
T ss_pred             HHHhcC----CCEEEeCCccccCCCeEEEEeC----CCCHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccc
Confidence            666543    212111111   1345555553    3456778888876  7776642                      


Q ss_pred             -CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCCC
Q 021893          250 -DTIVRLTPPLSISSNELQEGSKALHDVLELDLPKM  284 (306)
Q Consensus       250 -~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~~  284 (306)
                       .+++|++++..++++++++++++|+++++ ++.+.
T Consensus       368 ~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~-~~~~~  402 (423)
T 3lvm_A          368 AHSSIRFSLGRFTTEEEIDYTIELVRKSIG-RLRDL  402 (423)
T ss_dssp             HHTEEEEECCTTCCHHHHHHHHHHHHHHHH-HHHTS
T ss_pred             cCceEEEECCCCCCHHHHHHHHHHHHHHHH-Hhhcc
Confidence             38999999988999999999999999998 77553

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=99.85  E-value=3.9e-21  Score=179.29  Aligned_cols=269  Identities=11%  Similarity=0.045  Sum_probs=172.0

Q ss_pred             ceEEEEecCCCCcccchhccc-CCccccccCCCCCCC-----------ccccc-------CCCHHHHHHHHHhc---CCc
Q 021893            3 AIIVSCCGCFHGRTLAAISMS-CDNEAIRGFGPLLPG-----------HLKVD-------FGDITALEKIFKES---GDQ   60 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~-------~~d~~~le~~i~~~---~~~   60 (306)
                      ..|++.+|+..+...++..+. .+....-...|.++.           ++.++       ..|+++|+++|++.   +.+
T Consensus       158 ~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~  237 (500)
T 3tcm_A          158 DDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGIN  237 (500)
T ss_dssp             GGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCE
T ss_pred             ccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCC
Confidence            356777777766655555554 222221111223322           12333       34899999999862   236


Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc--cccc----ccCC---CCCc---EEEec
Q 021893           61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR--MLAS----DWEE---VRPD---MVILG  128 (306)
Q Consensus        61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~--~~~~----~~~~---~~~d---~~s~s  128 (306)
                      +++|+++.++|++|.+ .+.+.+++|.++|++||+++|+||+|.++.+.+.  ..++    ...+   -..+   +.|+|
T Consensus       238 ~k~ivl~~p~NPtG~~-~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~S  316 (500)
T 3tcm_A          238 VRALVVINPGNPTGQV-LAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVS  316 (500)
T ss_dssp             EEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESS
T ss_pred             ceEEEEECCCCCCccc-CCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCC
Confidence            8888888889999865 5789999999999999999999999997644321  1111    1111   1112   23899


Q ss_pred             ccc-c-CCcccceeeEe---CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHH-----------HHhh-ccHHHHHHHHHH
Q 021893          129 KAL-G-GGVIPVSAVLA---DKEVMLCIQPGEHGSTFGGNPLASAVAIASLD-----------VIRD-EKLAERSAHLGE  191 (306)
Q Consensus       129 K~~-~-~G~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~-----------~~~~-~~~~~~~~~~~~  191 (306)
                      |.+ | +|+ |+||+++   ++++++.+.... ...++.+.+++.++..+++           +... +.+.++++++++
T Consensus       317 K~~~g~~G~-R~G~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  394 (500)
T 3tcm_A          317 KGYYGECGK-RGGYFEITGFSAPVREQIYKIA-SVNLCSNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAK  394 (500)
T ss_dssp             STTTCCGGG-CCEEEEEESCCTTHHHHHHHHH-HTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCcc-ceEEEEEeCCCHHHHHHHHHHH-hcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHH
Confidence            999 5 799 9999988   888887775432 2345667888877776664           2111 335566777777


Q ss_pred             HHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCCh----------hhHHHHH-HHHHHCCceeccC-------CCCEE
Q 021893          192 ELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP----------VSAYDIC-LKMKERGILAKPT-------HDTIV  253 (306)
Q Consensus       192 ~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~----------~~~~~~~-~~l~~~Gi~~~~~-------~~~~l  253 (306)
                      .+.+.|+++    +++....+..|+++|+.+.... .          .....++ +.|.++||.+.|+       +.+++
T Consensus       395 ~l~~~L~~~----~g~~~~~~~g~~~~~~~~~lp~-~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~i  469 (500)
T 3tcm_A          395 ALEHAFNKL----EGITCNEAEGAMYVFPQICLPQ-KAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHF  469 (500)
T ss_dssp             HHHHHHHTS----TTEECCCCCBTTEECCEECCCH-HHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBE
T ss_pred             HHHHHHhcC----CCcEEecCCeEEEEeeeecCch-hhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEE
Confidence            777777664    2233334455666664443100 0          0122334 4555679999864       34589


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          254 RLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       254 Ri~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      |+++.  .+++++++++++|+++++ ++.
T Consensus       470 Ris~~--~~~e~i~~~i~~l~~~~~-~~~  495 (500)
T 3tcm_A          470 RCTIL--PQEDKIPAVISRFTVFHE-AFM  495 (500)
T ss_dssp             EEESC--SCTTTHHHHHHHHHHHHH-HHH
T ss_pred             EEEEC--CCHHHHHHHHHHHHHHHH-HHH
Confidence            99965  889999999999999988 654

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=99.85  E-value=4.2e-21  Score=178.89  Aligned_cols=270  Identities=13%  Similarity=0.078  Sum_probs=172.6

Q ss_pred             ceEEEEecCCCCcccchhcccCCcc----ccccCCCCCCC-----------cccccCC-------CHHHHHHHHHhcCC-
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNE----AIRGFGPLLPG-----------HLKVDFG-------DITALEKIFKESGD-   59 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~----~~~~~~~~~~~-----------~~~~~~~-------d~~~le~~i~~~~~-   59 (306)
                      ..|++++|+.++....+..+..+..    ..-...|.++.           ++.++++       |+++|++++++++. 
T Consensus       154 ~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~  233 (498)
T 3ihj_A          154 DNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDH  233 (498)
T ss_dssp             GGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTT
T ss_pred             ccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhcc
Confidence            3567777777776655555544321    11111233322           2333333       89999999986432 


Q ss_pred             -cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc--cccccc----C------CC-CCcEE
Q 021893           60 -QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR--MLASDW----E------EV-RPDMV  125 (306)
Q Consensus        60 -~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~--~~~~~~----~------~~-~~d~~  125 (306)
                       ++++|+++.++|++|.+ .+.+.+++|.++|++||+++|+||+|..+.+.+.  ..++..    .      .. ...+.
T Consensus       234 ~~~k~i~l~np~NPTG~v-~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~  312 (498)
T 3ihj_A          234 CDPKVLCIINPGNPTGQV-QSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFH  312 (498)
T ss_dssp             SEEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEE
T ss_pred             CCCeEEEEECCCCCCCCc-CCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEe
Confidence             58888888889999965 5789999999999999999999999997644432  111111    0      01 12244


Q ss_pred             Eecccc-c-CCcccceeeE---eCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHH-----------HHhh-ccHHHHHHH
Q 021893          126 ILGKAL-G-GGVIPVSAVL---ADKEVMLCIQPGEHGSTFGGNPLASAVAIASLD-----------VIRD-EKLAERSAH  188 (306)
Q Consensus       126 s~sK~~-~-~G~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~-----------~~~~-~~~~~~~~~  188 (306)
                      |+||.+ | +|+ |+||++   .++++++.+..... ...+.+.+++.++..+++           ++.. +...+++++
T Consensus       313 S~SK~~~G~~G~-R~G~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~  390 (498)
T 3ihj_A          313 STSKGYMGECGY-RGGYMEVINLHPEIKGQLVKLLS-VRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAK  390 (498)
T ss_dssp             ESSSSTTCCSSS-CCEEEEEESCCHHHHHHHHHHHH-HSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccCccc-ceEEEEEecCCHHHHHHHHHHHh-ccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHH
Confidence            899999 5 799 999998   58888877764322 344567777776666553           1111 234566667


Q ss_pred             HHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC--------ChhhHHHH-H-HHHHHCCceeccC-------CCC
Q 021893          189 LGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA--------LPVSAYDI-C-LKMKERGILAKPT-------HDT  251 (306)
Q Consensus       189 ~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~--------~~~~~~~~-~-~~l~~~Gi~~~~~-------~~~  251 (306)
                      +++.+.+.|+++    +++....+..|.++|+.+....        .+....++ + +.|.++||.+.|+       +.+
T Consensus       391 ~~~~l~~~L~~~----~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~  466 (498)
T 3ihj_A          391 KAKLTEDLFNQV----PGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTY  466 (498)
T ss_dssp             HHHHHHHHHHTS----TTEECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCC
T ss_pred             HHHHHHHHHhcC----CCcEecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCC
Confidence            777777777654    2333334456666666553210        01123333 4 4455679999873       345


Q ss_pred             EEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          252 IVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       252 ~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      ++|+++  ..++++++.++++|+++++ ++.
T Consensus       467 ~~Ris~--~~~~e~l~~~i~~L~~~~~-~~~  494 (498)
T 3ihj_A          467 HFRMTI--LPPVEKLKTVLQKVKDFHI-NFL  494 (498)
T ss_dssp             BEEEEC--CSCHHHHHHHHHHHHHHHH-HHH
T ss_pred             EEEEEe--CCCHHHHHHHHHHHHHHHH-HHH
Confidence            899995  5899999999999999988 654

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=99.85  E-value=3e-21  Score=176.08  Aligned_cols=218  Identities=15%  Similarity=0.096  Sum_probs=148.7

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc--cccc----ccCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR--MLAS----DWEE  119 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~--~~~~----~~~~  119 (306)
                      |++.|++.+++++++++++++++++|++|.. .+.+.+++|.++|++||+++|+||+|.++.+.+.  ..+.    +..+
T Consensus       181 d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~  259 (420)
T 4f4e_A          181 NFDGMLAALNGYEPGTIVVLHACCHNPTGVD-LNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANL  259 (420)
T ss_dssp             CHHHHHHHHTTCCTTCEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTC
T ss_pred             CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCC
Confidence            8999999999766678999999999999965 5789999999999999999999999998765431  1111    1222


Q ss_pred             CCCcEEEeccccc-CCcccceeeEe---CHHHHhh----cCCCCccCCCCCCHHHHHHHHHHHHHHh--------hccHH
Q 021893          120 VRPDMVILGKALG-GGVIPVSAVLA---DKEVMLC----IQPGEHGSTFGGNPLASAVAIASLDVIR--------DEKLA  183 (306)
Q Consensus       120 ~~~d~~s~sK~~~-~G~~~~g~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~aa~~al~~~~--------~~~~~  183 (306)
                      ....+.|+||.++ +|+ |+||+++   ++++++.    ++..........+.+++.++...++...        .++..
T Consensus       260 ~~i~~~S~SK~~~~~G~-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~  338 (420)
T 4f4e_A          260 NVFVSSSFSKSFSLYGE-RVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGEMR  338 (420)
T ss_dssp             CEEEEEECTTTTTCGGG-CEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             CEEEEEeCCccCcCcCC-CcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence            2334559999999 799 9999863   4565443    2211112333445666666665554321        13356


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCH
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISS  263 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~  263 (306)
                      ++++++++.+.+.|++..... ++....+..|.++|+.++       ...+.+.+.++||++.+++    |+++. ..++
T Consensus       339 ~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~g~~~~~~~~-------~~~~~~~l~~~gI~v~~~~----Ris~~-~~~~  405 (420)
T 4f4e_A          339 DRIRAMRNGLVERLKAAGIER-DFSFINAQRGMFSYSGLT-------SAQVDRLREEFGIYAVSTG----RICVA-ALNT  405 (420)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSS-CCTHHHHSCSSEEECCCC-------HHHHHHHHHHHCEECCTTS----EEEGG-GCCT
T ss_pred             HHHHHHHHHHHHHHHhcCCCC-CceeECCCccEEEEeCCC-------HHHHHHHHHhCCEEecCCC----eEEEe-cCCH
Confidence            677777777777777653210 122233456666665443       3456777778899999863    88864 3367


Q ss_pred             HHHHHHHHHHHHHHh
Q 021893          264 NELQEGSKALHDVLE  278 (306)
Q Consensus       264 ~~i~~~~~~l~~~l~  278 (306)
                      +++++++++|+++++
T Consensus       406 ~~i~~~~~~l~~~l~  420 (420)
T 4f4e_A          406 RNLDVVANAIAAVLK  420 (420)
T ss_dssp             TTHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhC
Confidence            779999999998763

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=99.85  E-value=1.7e-21  Score=176.03  Aligned_cols=217  Identities=16%  Similarity=0.102  Sum_probs=147.6

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccc--ccccc----ccCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSG--RMLAS----DWEE  119 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g--~~~~~----~~~~  119 (306)
                      |++.|++.+++++++++++++++++|++|.+ .+.+.+++|.++|++||+++|+||+|+++...+  ...+.    +..+
T Consensus       159 d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  237 (397)
T 3fsl_A          159 RFNDLLATLKTLQAGSIVLLHPCCHNPTGAD-LTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGL  237 (397)
T ss_dssp             CHHHHHHHHTTCCTTCEEEECSSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTC
T ss_pred             cHHHHHHHHHhCCCCCEEEEeCCCCCCCCcC-CCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCC
Confidence            8999999999766678999999999999965 578889999999999999999999999875442  11111    1223


Q ss_pred             CCCcEEEeccccc-CCcccceeeEe---CHHHHhhcCCC----CccCCCCCCHHHHHHHHHHHHHH------h--hccHH
Q 021893          120 VRPDMVILGKALG-GGVIPVSAVLA---DKEVMLCIQPG----EHGSTFGGNPLASAVAIASLDVI------R--DEKLA  183 (306)
Q Consensus       120 ~~~d~~s~sK~~~-~G~~~~g~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~aa~~al~~~------~--~~~~~  183 (306)
                      ....+.|+||.++ +|+ |+||+++   ++++++.+...    ........+.+++.++..+++..      .  .++..
T Consensus       238 ~~i~~~S~SK~~~~~G~-riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~  316 (397)
T 3fsl_A          238 PALVSNSFSKIFSLYGE-RVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEMR  316 (397)
T ss_dssp             CEEEEEECTTTTTCGGG-CCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEecccccccCcCC-CeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence            3344559999999 899 9999864   45555433211    11223334556666665555421      1  13456


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCH
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISS  263 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~  263 (306)
                      ++++++++.+.+.|++..... ++....+..|.++|+.++       ...+.+.|.++||.+.|++    |+++. ..++
T Consensus       317 ~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~gi~v~~g~----Ris~~-~~~~  383 (397)
T 3fsl_A          317 TRILAMRQELVKVLSTEMPER-NFDYLLNQRGMFSYTGLS-------AAQVDRLREEFGVYLIASG----RMCVA-GLNT  383 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTS-CCTHHHHCCSSEEECCCC-------HHHHHHHHHTTCEECCTTC----EEEGG-GCCT
T ss_pred             HHHHHHHHHHHHHHHhcCCCC-CceeecCCceEEEecCCC-------HHHHHHHHHhCCEEECCCC----eEEEE-ecCH
Confidence            777788888888888763210 122223345666665443       3456777788899999874    88864 3366


Q ss_pred             HHHHHHHHHHHHHH
Q 021893          264 NELQEGSKALHDVL  277 (306)
Q Consensus       264 ~~i~~~~~~l~~~l  277 (306)
                      ++|+.++++|++++
T Consensus       384 ~~i~~~~~~l~~~l  397 (397)
T 3fsl_A          384 ANVQRVAKAFAAVM  397 (397)
T ss_dssp             TTHHHHHHHHHHHC
T ss_pred             hhHHHHHHHHHhhC
Confidence            78999999998763

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=99.85  E-value=4.5e-20  Score=166.58  Aligned_cols=220  Identities=14%  Similarity=0.128  Sum_probs=160.2

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|+++|++.++++  ++++|++++++|++|.+.+    +++|.++|++||+++|+||+|+ ++..  .+...  ...+|+
T Consensus       130 ~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~Dea~~-~g~~--~~~~~--~~~~d~  198 (396)
T 2ch1_A          130 FSLETLARAIELH--QPKCLFLTHGDSSSGLLQP----LEGVGQICHQHDCLLIVDAVAS-LCGV--PFYMD--KWEIDA  198 (396)
T ss_dssp             CCHHHHHHHHHHH--CCSEEEEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-BTTB--CCCTT--TTTCCE
T ss_pred             CCHHHHHHHHHhC--CCCEEEEECCCCCCceecC----HHHHHHHHHHcCCEEEEEcccc-ccCC--ccchh--hcCcCE
Confidence            5899999999853  5788999999999998887    9999999999999999999998 3321  22222  234576


Q ss_pred             EE--ecccccCCcccceeeEeCHHHHhhcCCCC-----------------------ccCCCCCCHHHHHHHHHHHHHHhh
Q 021893          125 VI--LGKALGGGVIPVSAVLADKEVMLCIQPGE-----------------------HGSTFGGNPLASAVAIASLDVIRD  179 (306)
Q Consensus       125 ~s--~sK~~~~G~~~~g~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~aa~~al~~~~~  179 (306)
                      ++  ++|.++++. ++|++++++++++.+....                       ....++.+..++.++.++++.+.+
T Consensus       199 ~~~s~~K~~~~~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~  277 (396)
T 2ch1_A          199 VYTGAQKVLGAPP-GITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAE  277 (396)
T ss_dssp             EECCCC-CCCCCS-SCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred             EEEcCCccccCCC-CeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHH
Confidence            64  559999887 8899999998887653210                       112234577788888888887643


Q ss_pred             ---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE--EeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC----C
Q 021893          180 ---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR--GRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT----H  249 (306)
Q Consensus       180 ---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~--~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~  249 (306)
                         ++..++++++++++.+.|++++  +. ......  ..+.++++.++.   +.+..++++.|+++ ||.+.++    .
T Consensus       278 ~~~~~~~~~~~~~~~~l~~~L~~~g--~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~~~~gi~v~~g~~~~~  351 (396)
T 2ch1_A          278 EGLENQIKRRIECAQILYEGLGKMG--LD-IFVKDPRHRLPTVTGIMIPK---GVDWWKVSQYAMNNFSLEVQGGLGPTF  351 (396)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHHHT--CC-BSSCSGGGBCTTEEEEECCT---TCCHHHHHHHHHHHHCBCCBCCCGGGT
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHCC--Ce-eccCCccccCCceEEEEcCC---CCCHHHHHHHHHHhCCEEEecCccccC
Confidence               3467788888888988888872  21 111110  123466776653   34677899999876 9999875    3


Q ss_pred             CCEEEEeC-CCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          250 DTIVRLTP-PLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       250 ~~~lRi~~-~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      ++++|+++ +...+++++++++++|+++++ ++..
T Consensus       352 ~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~-~~~~  385 (396)
T 2ch1_A          352 GKAWRVGIMGECSTVQKIQFYLYGFKESLK-ATHP  385 (396)
T ss_dssp             TTEEEEECCGGGCSHHHHHHHHHHHHHHHH-HHCT
T ss_pred             CCEEEEECCCCcCCHHHHHHHHHHHHHHHH-HhCc
Confidence            67999998 456789999999999999999 7653

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=99.85  E-value=1.6e-20  Score=175.67  Aligned_cols=222  Identities=16%  Similarity=0.068  Sum_probs=152.1

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccc-----ccc---cccccc
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR-----SGR---MLASDW  117 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~-----~g~---~~~~~~  117 (306)
                      |+++|+++|+   +++++|+++++++++|.+.+    +++|.++|++||++||+||+|+++..     .|.   .+....
T Consensus       228 d~~~Le~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~  300 (514)
T 3mad_A          228 DVAAMREAIT---PNTVVVAGSAPGYPHGVVDP----IPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRL  300 (514)
T ss_dssp             CHHHHHHHCC---TTEEEEEEETTCTTTCCCCC----HHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTS
T ss_pred             CHHHHHHHhc---cCCEEEEEeCCCCCCccccC----HHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccC
Confidence            8999999997   47999999999999998887    99999999999999999999997532     233   232333


Q ss_pred             CCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCC-----------ccCCCCCCHHHHHHHHHHHHHHhh---ccHH
Q 021893          118 EEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-----------HGSTFGGNPLASAVAIASLDVIRD---EKLA  183 (306)
Q Consensus       118 ~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~aa~~al~~~~~---~~~~  183 (306)
                      .+++..+.+++|.+.+|. ++|+++++++.+.......           .....+.+.....++.++++.+..   ++..
T Consensus       301 ~g~d~~~~s~~K~l~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~  379 (514)
T 3mad_A          301 EGVTSVSADTHKYGYGAK-GTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDAT  379 (514)
T ss_dssp             TTCCEEEECTTTTTCCCS-SCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEECchhccCCCC-CeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHH
Confidence            444333445669988888 9999988776554322100           000112333444555566665544   3456


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-CCCEEEEeCC-CCC
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-HDTIVRLTPP-LSI  261 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-~~~~lRi~~~-~~~  261 (306)
                      ++..++++++++.|+++    ++....... ..++++...    ..+..++.+.|.++||.+... .++.+|+++. ..+
T Consensus       380 ~~~~~~~~~l~~~L~~~----~g~~~~~~~-~~~~~~~~~----~~~~~~l~~~L~~~Gi~v~g~~~~~~~Ri~~~~~~~  450 (514)
T 3mad_A          380 RRILQAADRLKAGVRAI----PSLKILGDP-LWVIAVASD----ELNIYQVMEEMAGRGWRLNGLHRPPAFHVALTLRHT  450 (514)
T ss_dssp             HHHHHHHHHHHHHHHTS----TTCEESSCC-SSEEEEECS----SSCHHHHHHHHHTTTCBCEEETTTTEEEEECCGGGG
T ss_pred             HHHHHHHHHHHHHHhhC----CCeEEeCCC-eEEEEEeCC----CCCHHHHHHHHHhcCCEeccCCCCCeEEEEEecCCC
Confidence            77777778888777763    112111112 335565443    345778999999999988432 3678999986 445


Q ss_pred             CHHHHHHHHHHHHHHHhhhcCCCC
Q 021893          262 SSNELQEGSKALHDVLELDLPKMR  285 (306)
Q Consensus       262 t~~~i~~~~~~l~~~l~~~~~~~~  285 (306)
                      +++++++++++|+++++ ++.+..
T Consensus       451 ~~e~i~~~l~~L~~~l~-~~~~~~  473 (514)
T 3mad_A          451 EPGVVDRFLADLQDAVA-QVRAHP  473 (514)
T ss_dssp             STTHHHHHHHHHHHHHH-HHHHCT
T ss_pred             CHHHHHHHHHHHHHHHH-HHHhCC
Confidence            67999999999999998 776543

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=99.85  E-value=4.5e-20  Score=165.61  Aligned_cols=215  Identities=17%  Similarity=0.147  Sum_probs=153.0

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcC--CEEEEehhhhcccccccccccccCCCCC
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN--ILMIADEIQSGLARSGRMLASDWEEVRP  122 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~g--i~li~De~~~g~~~~g~~~~~~~~~~~~  122 (306)
                      .|++.|++.++   +++++|++++++|++|.+.+    +++|.++|++||  +++|+||+|+ ++..  .+....  ...
T Consensus       127 ~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~li~Dea~~-~~~~--~~~~~~--~~~  194 (384)
T 1eg5_A          127 VKLEELEKLVD---EDTFLVSIMAANNEVGTIQP----VEDVTRIVKKKNKETLVHVDAVQT-IGKI--PFSLEK--LEV  194 (384)
T ss_dssp             BCHHHHHHHCC---TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHHCTTCEEEEECTTT-TTTS--CCCCTT--TCC
T ss_pred             cCHHHHHHHhC---CCCeEEEEECCCCCcccccC----HHHHHHHHHhcCCceEEEEEhhhh-cCCc--ccCchh--cCC
Confidence            47999999987   47899999999999998888    999999999999  9999999997 4322  222222  245


Q ss_pred             cEE--EecccccCCcccceeeEeCHHH--HhhcCCCC---ccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHH
Q 021893          123 DMV--ILGKALGGGVIPVSAVLADKEV--MLCIQPGE---HGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEEL  193 (306)
Q Consensus       123 d~~--s~sK~~~~G~~~~g~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l  193 (306)
                      |++  |+||.++. . ++||+++++++  ...+....   ...+++.+.+.+.++.++++.+.+  ++..++++++.+++
T Consensus       195 di~~~s~sK~~g~-~-G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l  272 (384)
T 1eg5_A          195 DYASFSAHKFHGP-K-GVGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKL  272 (384)
T ss_dssp             SEEEEEGGGGTSC-T-TCEEEEECTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             CEEEecHHHhcCC-C-ceEEEEEcCCCccccccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            666  55598662 1 36889998875  22222211   123456788888888888887543  44667777888888


Q ss_pred             HHHHHHHHhhCCCceeeEE---EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC---------------------
Q 021893          194 RQHLFKIQQQFPNYVKEVR---GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---------------------  249 (306)
Q Consensus       194 ~~~L~~~~~~~~~~~~~~~---~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---------------------  249 (306)
                      .+.|++.     +.....+   ..+.++++.++.    .+..++.+.|.++||.+.++.                     
T Consensus       273 ~~~L~~~-----g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~  343 (384)
T 1eg5_A          273 VSGLMNL-----GAHIITPLEISLPNTLSVSFPN----IRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRR  343 (384)
T ss_dssp             HHHHHTT-----TCEECSCTTSBCTTEEEEECTT----CCHHHHHHHHHHTTEECBC------------CHHHHTTCCHH
T ss_pred             HHHhCCC-----CeEEeCCcccCCCCEEEEEeCC----CCHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChh
Confidence            8877762     1211111   134556665542    356789999999999998741                     


Q ss_pred             --CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          250 --DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       250 --~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                        .+++|++++..++++++++++++|+++++ ++.+
T Consensus       344 ~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~-~~~~  378 (384)
T 1eg5_A          344 IAQGAIRISLCKYNTEEEVDYFLKKIEEILS-FLDL  378 (384)
T ss_dssp             HHHHEEEEECCTTCCHHHHHHHHHHHHHHHH-HC--
T ss_pred             hcCCeEEEECCCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence              36899998877899999999999999999 7653

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=99.85  E-value=9.7e-21  Score=171.56  Aligned_cols=222  Identities=11%  Similarity=0.070  Sum_probs=151.1

Q ss_pred             cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893           39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE  118 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~  118 (306)
                      +..++.+|++++++.++   +++++|++++++|++|.+.+    +++|.++|++||+++|+||+|+.+. .+..+   .+
T Consensus       131 ~~~v~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~~~~-~~~~~---~~  199 (398)
T 2rfv_A          131 VRFVDAAKPEEIRAAMR---PETKVVYIETPANPTLSLVD----IETVAGIAHQQGALLVVDNTFMSPY-CQQPL---QL  199 (398)
T ss_dssp             EEEECTTSHHHHHHHCC---TTEEEEEEESSBTTTTBCCC----HHHHHHHHHHTTCEEEEECTTTCTT-TCCGG---GG
T ss_pred             EEEeCCCCHHHHHHhcC---CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCcccc-cCCch---hh
Confidence            35566679999999987   47999999999999999887    9999999999999999999998431 12221   22


Q ss_pred             CCCCcEEEeccccc-CCcccc-eeeEeCHHHHh-hcCCCCccC-CCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 021893          119 EVRPDMVILGKALG-GGVIPV-SAVLADKEVML-CIQPGEHGS-TFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELR  194 (306)
Q Consensus       119 ~~~~d~~s~sK~~~-~G~~~~-g~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~  194 (306)
                      +.+..+.|+||.++ +|. |+ |++++++++++ .++...... +.+.+++.+.++.++++.+..  ..++..++.+.+.
T Consensus       200 ~~di~~~s~sK~~~~~g~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~  276 (398)
T 2rfv_A          200 GADIVVHSVTKYINGHGD-VIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKTLGI--RMERHCENALKIA  276 (398)
T ss_dssp             TCSEEEEETTTTTTCSSC-CCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHH
T ss_pred             CCcEEEEeCcccccCCCC-ceEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhhhHHH--HHHHHHHHHHHHH
Confidence            33344568999997 577 88 99999998876 565433333 456788888888888765422  2344555666666


Q ss_pred             HHHHHHH-------h---hCCCceee---EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------------
Q 021893          195 QHLFKIQ-------Q---QFPNYVKE---VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------------  248 (306)
Q Consensus       195 ~~L~~~~-------~---~~~~~~~~---~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------------  248 (306)
                      +.|++..       .   ..|+....   .++.|.++++.++..  ......+.+.+...|+.++++             
T Consensus       277 ~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~  354 (398)
T 2rfv_A          277 RFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGG--LEAGRRMINSVELCLLAVSLGDTETLIQHPASMT  354 (398)
T ss_dssp             HHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTH--HHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHT
T ss_pred             HHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCC--HHHHHHHHHhCCcceeccCCCCcceeeecccccc
Confidence            6665431       0   00000000   124677888877631  123444555555556665543             


Q ss_pred             ------------C--CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          249 ------------H--DTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       249 ------------~--~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                                  +  ++++|++++..+++++++.+.+.|+++
T Consensus       355 ~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~  396 (398)
T 2rfv_A          355 HSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA  396 (398)
T ss_dssp             SSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             cccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence                        1  579999999999999998888888653

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=99.85  E-value=2.3e-20  Score=165.93  Aligned_cols=205  Identities=15%  Similarity=0.101  Sum_probs=146.4

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc--ccccCCCCCcEEEeccccc-CCc
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML--ASDWEEVRPDMVILGKALG-GGV  135 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~--~~~~~~~~~d~~s~sK~~~-~G~  135 (306)
                      +++++|+++.++|++|.+.+ .+.+++|.+.|++  .++|+||+|+++...+...  ..+..+....+.|+||.++ +|+
T Consensus       128 ~~~~~v~i~~p~nptG~~~~-~~~l~~l~~~~~~--~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~  204 (350)
T 3fkd_A          128 SNMDFCWLCNPNNPDGRLLQ-RTEILRLLNDHPD--TTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGL  204 (350)
T ss_dssp             TTCSEEEEESSCTTTCCCCC-HHHHHHHHHHCTT--SEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGG
T ss_pred             CCCCEEEEeCCCCCcCCCCC-HHHHHHHHHhCCC--CEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcch
Confidence            36788888889999997765 4455555555544  4999999999876555432  1222333345569999999 899


Q ss_pred             ccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh--hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE
Q 021893          136 IPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR--DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG  213 (306)
Q Consensus       136 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~  213 (306)
                       |+||+++++++++.+....  .+++.+++++.++.++++...  .+...+.. ++++.+.+.|+++    + .+...+.
T Consensus       205 -r~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~l~~~L~~~----~-~~~~~~~  275 (350)
T 3fkd_A          205 -RIGYIVANKDFMKRVAAFS--TPWAVNALAIEAAKFILIHPAQFTLPIRKWQ-RNTVDFITALNRL----D-GVEVHPS  275 (350)
T ss_dssp             -CCEEEECCHHHHHHHHTTC--CTTCSCHHHHHHHHHHHHCTTTTCCCHHHHH-HHHHHHHHHHHHS----T-TEEECCC
T ss_pred             -heEeEEeCHHHHHHHHHhC--CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHH-HHHHHHHHHHhcC----C-CcEECCC
Confidence             9999999999998887643  356778888888888887543  13333333 6667777777654    2 2333456


Q ss_pred             eeeEEEEEEecCCChhhHHHHHHHHHH-CCceeccCC------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          214 RGLFNAVEFDKTALPVSAYDICLKMKE-RGILAKPTH------DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       214 ~g~~~~i~~~~~~~~~~~~~~~~~l~~-~Gi~~~~~~------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      .|.++++.++.   . +..++++.|.+ +||.+.++.      .+++|++++   +.++++.+++.|+++++ +...
T Consensus       276 ~~~~~~~~~~~---~-~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~~~-~~~~  344 (350)
T 3fkd_A          276 GTTFFLLRLKK---G-TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ---RPAQNQLFIKALETFLE-KYEG  344 (350)
T ss_dssp             SSSEEEEEESS---S-CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHHT-C---
T ss_pred             CCcEEEEECCC---C-CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC---CHHHHHHHHHHHHHHHH-Hhcc
Confidence            67788887774   2 67889999999 899998752      689999943   78999999999999988 5543

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=99.84  E-value=6.1e-20  Score=162.18  Aligned_cols=204  Identities=15%  Similarity=0.140  Sum_probs=146.2

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |++.|++.     .++++++++.++|++|.+.+    ++++.++|+++++ +|+||+|.+|+..+... ....+....+.
T Consensus       126 d~~~l~~~-----~~~~~v~i~~p~nptG~~~~----~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~-~~~~~~~i~~~  194 (337)
T 3p1t_A          126 DPNDLAQV-----SRDDCVVLANPSNPTGQALS----AGELDQLRQRAGK-LLIDETYVDYSSFRARG-LAYGENELVFR  194 (337)
T ss_dssp             CHHHHTTC-----CTTEEEEEESSCTTTCCCCC----HHHHHHHHHHCSE-EEEECTTGGGSSCSSSC-CCCBTTEEEEE
T ss_pred             CHHHHHhh-----cCCCEEEEeCCCCCCCCCCC----HHHHHHHHHhCCc-EEEECCChhhccccccc-cccCCCEEEEe
Confidence            77887754     35688888889999999888    8899999999997 56699999775443321 22223334456


Q ss_pred             Eeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhh
Q 021893          126 ILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQ  203 (306)
Q Consensus       126 s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~  203 (306)
                      |+||.++ +|+ |+||+++++++++.+...  ...++.+.+++.++.++++.... ++..+++.++++++.+.|++.+  
T Consensus       195 S~sK~~g~~G~-r~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g--  269 (337)
T 3p1t_A          195 SFSKSYGLAGL-RLGALFGPSELIAAMKRK--QWFCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGLG--  269 (337)
T ss_dssp             ESSSTTCCTTT-CCEEEECCHHHHHHHHTT--SCTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred             eCchhccCcch-heEEEEeCHHHHHHHHhh--cCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCc--
Confidence            9999998 899 999999999999888763  23456678888887777764321 2344555666666777776652  


Q ss_pred             CCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          204 FPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       204 ~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                         .. ..+..+.++++..++      ..++.+.|.++||.+.++.    ++++|++++   ++++++.++++|+++++
T Consensus       270 ---~~-~~~~~~~~~~~~~~~------~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~~~~l~~al~~~~~  335 (337)
T 3p1t_A          270 ---YR-VASSEANFVLVENAA------GERTLRFLRERGIQVKDAGQFGLHHHIRISIG---REEDNDRLLAALAEYSD  335 (337)
T ss_dssp             ---CC-BCCCSSSEEEEECTT------THHHHHHHHHTTEECEEGGGGTCCSEEEEECC---CHHHHHHHHHHHHHHTC
T ss_pred             ---CE-ECCCCCeEEEEEcCC------HHHHHHHHHHCCeEEEECccCCCCCeEEEecC---CHHHHHHHHHHHHHHhh
Confidence               21 233456677765542      3567888999999999753    589999954   78999999999987765

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=99.84  E-value=7.6e-21  Score=172.77  Aligned_cols=217  Identities=15%  Similarity=0.148  Sum_probs=147.2

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc---ccccc-cCCCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR---MLASD-WEEVR  121 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~---~~~~~-~~~~~  121 (306)
                      |+++|++.++++++++++++++.++|++|.+ .+.+.+++|.++|++||+++|+||+|.++++.+.   ..... ..+..
T Consensus       169 d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~  247 (409)
T 4eu1_A          169 NLAGMLECLDKAPEGSVILVHACAHNPTGVD-PTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMV  247 (409)
T ss_dssp             CHHHHHHHHHHSCTTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTS
T ss_pred             cHHHHHHHHHhCCCCcEEEEECCCCCCCCCC-CCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhC
Confidence            8999999998765567888878889999955 5789999999999999999999999998765541   11111 11222


Q ss_pred             Cc---EEEeccccc-CCcccceee---EeCHH----HHhhcCCCCccCCCCCCHHHHHHHHHHHHHH-------h-hccH
Q 021893          122 PD---MVILGKALG-GGVIPVSAV---LADKE----VMLCIQPGEHGSTFGGNPLASAVAIASLDVI-------R-DEKL  182 (306)
Q Consensus       122 ~d---~~s~sK~~~-~G~~~~g~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~-------~-~~~~  182 (306)
                      ++   +.|+||.++ +|+ |+||+   +.+++    +++.+.........+.+.+++.++..+++..       . .++.
T Consensus       248 ~~~i~~~S~SK~~g~~G~-riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  326 (409)
T 4eu1_A          248 PNLIVAQSFSKNFGLYGH-RCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQM  326 (409)
T ss_dssp             SCCEEEEECTTTSSCGGG-CCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             CcEEEEecCcccccCccC-CceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence            33   349999998 899 99996   55677    5555543333344556778888877777632       1 1345


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccCCCCEEEEeCCCCC
Q 021893          183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTHDTIVRLTPPLSI  261 (306)
Q Consensus       183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~~~lRi~~~~~~  261 (306)
                      .++++++++++++.|++.+... .+....+..|.++|+.++        .+++..++ ++||.+.|+    .|+++.. .
T Consensus       327 ~~~~~~~~~~l~~~L~~~g~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~ll~~~gv~v~p~----~Ri~~~~-~  392 (409)
T 4eu1_A          327 SSRIAEVRKRLVSELKACGSVH-DWSHIERQVGMMAYTGLT--------REQVELLRSEYHIYMTLN----GRAAVSG-L  392 (409)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCS-CCHHHHHSCSSEEECCCC--------HHHHHHHHHHHCEECCTT----CEEEGGG-C
T ss_pred             HHHHHHHHHHHHHHHHhcCCCC-CcceecCCceEEEEeCCC--------HHHHHHHHHcCCEEEcCC----CEEEEEe-c
Confidence            6677777888888877653100 011222345555554322        24456665 569999986    3777643 5


Q ss_pred             CHHHHHHHHHHHHHHHh
Q 021893          262 SSNELQEGSKALHDVLE  278 (306)
Q Consensus       262 t~~~i~~~~~~l~~~l~  278 (306)
                      ++++++.++++|+++++
T Consensus       393 ~~~~i~~~~~~l~~~l~  409 (409)
T 4eu1_A          393 NSTNVEYVSQAIHNVTK  409 (409)
T ss_dssp             CTTTHHHHHHHHHHHHC
T ss_pred             CHhhHHHHHHHHHHHhC
Confidence            66779999999988763

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=99.84  E-value=2e-20  Score=167.55  Aligned_cols=214  Identities=16%  Similarity=0.121  Sum_probs=148.7

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |+++|+++++   +++++|++++++|++|.+.+    +++|.++|++||+ +|+|++|+. +.  ..+....++.+..+.
T Consensus       127 d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~-li~D~a~~~-~~--~~~~~~~~~~d~~~~  195 (382)
T 4hvk_A          127 DVSFIDQKLR---DDTILVSVQHANNEIGTIQP----VEEISEVLAGKAA-LHIDATASV-GQ--IEVDVEKIGADMLTI  195 (382)
T ss_dssp             CHHHHHHHCC---TTEEEEECCSBCTTTCBBCC----HHHHHHHHSSSSE-EEEECTTTB-TT--BCCCHHHHTCSEEEE
T ss_pred             CHHHHHHHhc---cCceEEEEECCCCCceeeCC----HHHHHHHHHHcCE-EEEEhHHhc-CC--CCCCchhcCCCEEEE
Confidence            8999999987   57899999999999999888    9999999999999 999999972 11  112222233333445


Q ss_pred             EecccccCCcccceeeEeCHHHHhhcCCCCc-------cCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHH
Q 021893          126 ILGKALGGGVIPVSAVLADKEVMLCIQPGEH-------GSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQH  196 (306)
Q Consensus       126 s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~  196 (306)
                      |++|.++ +. ++|+++++++.  .+.+...       ....+.+...+.++.++++...+  ++..++.+++++++.+.
T Consensus       196 s~~K~~g-~~-g~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~  271 (382)
T 4hvk_A          196 SSNDIYG-PK-GVGALWIRKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDN  271 (382)
T ss_dssp             ESGGGTS-CT-TCEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eHHHhcC-CC-ceEEEEEcCcc--CcCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence            7779654 44 57888877654  3333211       11334567777777777776543  34566666777777766


Q ss_pred             HHHHHhhCCCceeeEE---EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----------------------C
Q 021893          197 LFKIQQQFPNYVKEVR---GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----------------------D  250 (306)
Q Consensus       197 L~~~~~~~~~~~~~~~---~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----------------------~  250 (306)
                      |+++    ++......   ..+.++.+.++    ..+..++.+.|.++||.+.++.                       .
T Consensus       272 L~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~  343 (382)
T 4hvk_A          272 VLKI----EESYLNGHPEKRLPNNVNVRFS----YIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAH  343 (382)
T ss_dssp             HTTS----TTEEECSCSSSBCTTEEEEEET----TCCHHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHH
T ss_pred             HhcC----CCeEEeCCccccCCCEEEEEEC----CCCHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcC
Confidence            6643    21211111   11345566554    2457789999999999998753                       5


Q ss_pred             CEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          251 TIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       251 ~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      +++|++++..++++++++++++|+++++ ++.+
T Consensus       344 ~~iRl~~~~~~t~e~i~~~~~~l~~~~~-~~~~  375 (382)
T 4hvk_A          344 GTLLLTLGRYNTDEDVDRLLEVLPGVIE-RLRS  375 (382)
T ss_dssp             TEEEEECCTTCCHHHHHHHHHHHHHHHH-HHHH
T ss_pred             CeEEEEcCCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence            8999999988999999999999999998 7654

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=99.83  E-value=6.3e-20  Score=162.30  Aligned_cols=194  Identities=13%  Similarity=0.090  Sum_probs=138.5

Q ss_pred             cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCCCCCcEEEeccccc-CCccc
Q 021893           60 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEEVRPDMVILGKALG-GGVIP  137 (306)
Q Consensus        60 ~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~~~~d~~s~sK~~~-~G~~~  137 (306)
                      ++++|+++.++|++|.+.+ .+.+++   +++..| ++|+||+|+++... .... .+..+....+.|+||.++ +|+ |
T Consensus       138 ~~~~v~l~~p~nptG~~~~-~~~l~~---l~~~~~-~li~De~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~-r  210 (335)
T 1uu1_A          138 EGDVVFIPNPNNPTGHVFE-REEIER---ILKTGA-FVALDEAYYEFHGE-SYVDFLKKYENLAVIRTFSKAFSLAAQ-R  210 (335)
T ss_dssp             TTEEEEEESSCTTTCCCCC-HHHHHH---HHHTTC-EEEEECTTHHHHCC-CCGGGGGTCSSEEEEEESTTTTTCGGG-C
T ss_pred             CCCEEEEeCCCCCCCCCCC-HHHHHH---HHHhCC-EEEEECcchhhcch-hHHHHhhhCCCEEEEecchhhcCCccc-C
Confidence            5677776666889997764 454444   444448 89999999976432 2121 222333445669999998 899 9


Q ss_pred             ceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893          138 VSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL  216 (306)
Q Consensus       138 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~  216 (306)
                      +||+++++++++.+....  .+++.+++++.++.++++... .++..++++++++++.+.|++.+  +   . ..+..|.
T Consensus       211 ~G~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~---~-~~~~~~~  282 (335)
T 1uu1_A          211 VGYVVASEKFIDAYNRVR--LPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMG--Y---R-ITDSRGN  282 (335)
T ss_dssp             CEEEEECHHHHHHHHHHS--CTTCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHT--C---C-BCCCCSS
T ss_pred             eEEEEeCHHHHHHHHHhc--CCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC--c---E-EcCCCCe
Confidence            999999999988776422  346788899988888887632 24466777888888888888762  2   1 1234567


Q ss_pred             EEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          217 FNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       217 ~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      ++++.++.    .+..++.+.|.++||.+.+ ..+++|+++.   +.+++++++++|+++
T Consensus       283 ~~~~~~~~----~~~~~~~~~l~~~gi~v~~-~~~~iRis~~---~~~~i~~~~~~l~~~  334 (335)
T 1uu1_A          283 FVFVFMEK----EEKERLLEHLRTKNVAVRS-FREGVRITIG---KREENDMILRELEVF  334 (335)
T ss_dssp             EEEEECCT----HHHHHHHHHHHHHTEEEEE-ETTEEEEECC---CHHHHHHHHHHHHCC
T ss_pred             EEEEECCC----CCHHHHHHHHHHCCEEEEE-CCCeEEEEeC---CHHHHHHHHHHHHhh
Confidence            77877652    4567899999999999998 4779999953   468899999988753

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.83  E-value=7.1e-20  Score=161.58  Aligned_cols=217  Identities=14%  Similarity=0.063  Sum_probs=149.8

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHH-cCCEEEEehhhhcccccccccccccC
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK-YNILMIADEIQSGLARSGRMLASDWE  118 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~-~gi~li~De~~~g~~~~g~~~~~~~~  118 (306)
                      ..++..|++.+++.++   +++++|++++++|++|.+.+    +++|.++|++ +|+++|+||+|+... ....  . .+
T Consensus        66 ~~~~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----~~~i~~~~~~~~~~~li~D~a~~~~~-~~~~--~-~~  134 (331)
T 1pff_A           66 DFIDMAVPGNIEKHLK---PNTRIVYFETPANPTLKVID----IEDAVKQARKQKDILVIVDNTFASPI-LTNP--L-DL  134 (331)
T ss_dssp             EEECTTSTTHHHHTCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHTTSSSCEEEEECTTTHHH-HCCG--G-GG
T ss_pred             EEeCCCCHHHHHHhhc---CCCeEEEEECCCCCcCcccC----HHHHHHHHhhhcCCEEEEECCCcccc-cCCh--h-hc
Confidence            4455678999999887   57999999999999999887    9999999999 999999999998321 1111  1 23


Q ss_pred             CCCCcEEEeccccc-CCccc-ceeeEeCH-HHHhhcCCCCcc-CCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 021893          119 EVRPDMVILGKALG-GGVIP-VSAVLADK-EVMLCIQPGEHG-STFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELR  194 (306)
Q Consensus       119 ~~~~d~~s~sK~~~-~G~~~-~g~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~  194 (306)
                      +....+.|++|.++ +|. | +|++++++ ++++.+++.... .+...+++.+.++..+++.+..  ..+...++.+.+.
T Consensus       135 ~~d~~~~s~~K~~~~~~~-r~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~  211 (331)
T 1pff_A          135 GVDIVVHSATKYINGHTD-VVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTLTLDM--RVKRAAENAQKVA  211 (331)
T ss_dssp             TCSEEEEETTTTTSSSSS-CCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred             CCcEEEEECccccCCCCC-ceEEEEEeCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcchHHH--HHHHHHHHHHHHH
Confidence            44444558899998 466 7 78999998 888888776555 4556777777777677765432  2333444445555


Q ss_pred             HHHHHHHh----------hCCCcee---eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------------
Q 021893          195 QHLFKIQQ----------QFPNYVK---EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------------  248 (306)
Q Consensus       195 ~~L~~~~~----------~~~~~~~---~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------------  248 (306)
                      +.+++...          ..++...   ..++.+.++.+.+.      +..++.+.|.++||.+.+.             
T Consensus       212 ~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~  285 (331)
T 1pff_A          212 EFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD------GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPA  285 (331)
T ss_dssp             HHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS------SHHHHHHHHHTCSSSEECSSCCSSSCEEECHH
T ss_pred             HHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC------CHHHHHHHHHhCCCceeccCCCCcceeeecch
Confidence            55544210          0000000   01235667777664      3456788888999965321             


Q ss_pred             -----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          249 -----------------HDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       249 -----------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                                       .++++|++++..+++++++.+++.|+++
T Consensus       286 ~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~  330 (331)
T 1pff_A          286 SMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV  330 (331)
T ss_dssp             HHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred             hhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence                             1579999999999999999999888653

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.83  E-value=3.7e-20  Score=167.53  Aligned_cols=239  Identities=16%  Similarity=0.146  Sum_probs=158.5

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+||+....|||....+....         ......+..++.+|+++|+++++   +++++|++++++|++|.+.+    
T Consensus       106 d~Vi~~~~~y~~~~~~~~~~~---------~~~g~~~~~v~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----  169 (392)
T 3qhx_A          106 DHVVIPDDAYGGTFRLIDKVF---------TGWNVEYTPVALADLDAVRAAIR---PTTRLIWVETPTNPLLSIAD----  169 (392)
T ss_dssp             CEEEEETTCCHHHHHHHHHTG---------GGGTCEEEEECTTCHHHHHHHCC---TTEEEEEEESSCTTTCCCCC----
T ss_pred             CEEEEeCCCcchHHHHHHHHH---------HhcCcEEEEeCCCCHHHHHHhhC---CCCeEEEEECCCCCCcEEec----
Confidence            467777777765432221110         01112346677789999999998   57999999999999999988    


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--EecccccC-C-cccceeeEeC-HHHHhhcCCCCcc
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGG-G-VIPVSAVLAD-KEVMLCIQPGEHG  157 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G-~~~~g~~~~~-~~~~~~~~~~~~~  157 (306)
                      +++|.++|++||+++|+||+|+.+      +.....+..+|++  |++|.+++ | . ++|+++.+ +++++.+....+.
T Consensus       170 l~~i~~la~~~g~~li~D~~~~~~------~~~~~~~~~~di~~~S~sK~lg~~g~~-~~G~v~~~~~~~~~~l~~~~~~  242 (392)
T 3qhx_A          170 IAGIAQLGADSSAKVLVDNTFASP------ALQQPLSLGADVVLHSTTKYIGGHSDV-VGGALVTNDEELDQSFAFLQNG  242 (392)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTCT------TTCCGGGGTCSEEEEETTTTTTCSSCC-CCEEEEESCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCccc------ccCChHHhCCcEEEEcCccccCCCCCc-eEEEEEECcHHHHHHHHHHHHh
Confidence            999999999999999999999732      1122223455665  68899994 4 6 89999987 6777777654444


Q ss_pred             CCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE------------------EEeeeEEE
Q 021893          158 STFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEV------------------RGRGLFNA  219 (306)
Q Consensus       158 ~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~------------------~~~g~~~~  219 (306)
                      .++..+++.+.++...++.+..  ..++..++.+.+.+.|++.    + .+..+                  ++.|.+++
T Consensus       243 ~g~~~~~~~~~~~~~~l~~l~~--~~~~~~~~~~~l~~~L~~~----~-~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~  315 (392)
T 3qhx_A          243 AGAVPGPFDAYLTMRGLKTLVL--RMQRHSENAAAVAEFLAEH----P-AISTVLYPGLPSHPGHAVAARQMRGFGGMVS  315 (392)
T ss_dssp             HCCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHTC----T-TEEEEECTTSTTSTTHHHHHHHCSSCCSEEE
T ss_pred             cCCCCCHHHHHHHHhhhhHHHH--HHHHHHHHHHHHHHHHhcC----C-CcceEECCCCCCCCCHHHHHHhCCCCceEEE
Confidence            5566778877777766655432  2445556666666666543    1 22222                  44588999


Q ss_pred             EEEecCCChhhHHHHHHHHHHCCceeccC------------------------CCCEEEEeCCCCCCHHHHHHHHHHH
Q 021893          220 VEFDKTALPVSAYDICLKMKERGILAKPT------------------------HDTIVRLTPPLSISSNELQEGSKAL  273 (306)
Q Consensus       220 i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------------------------~~~~lRi~~~~~~t~~~i~~~~~~l  273 (306)
                      +.+...  ......|...|...|+.++.+                        .++.||++++...+++.++.+.++|
T Consensus       316 ~~l~~~--~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~al  391 (392)
T 3qhx_A          316 VRMRAG--RTAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQAL  391 (392)
T ss_dssp             EEETTC--HHHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred             EEeCCc--HHHHHHHHHhCCCceECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHHHh
Confidence            998741  245667777777666554422                        2578999977665555555554443

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.83  E-value=8.4e-20  Score=164.02  Aligned_cols=212  Identities=13%  Similarity=0.085  Sum_probs=152.6

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc--CCEEEEehhhhcccccccccccccCCCCC
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--NILMIADEIQSGLARSGRMLASDWEEVRP  122 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~--gi~li~De~~~g~~~~g~~~~~~~~~~~~  122 (306)
                      .|+++|++++++  .++++|++++++|++|.+.+    +++|.++|++|  |+++|+||+|+. +..  .+....+  .+
T Consensus       124 ~d~~~l~~~l~~--~~~~~v~~~~~~nptG~~~~----l~~i~~~~~~~~~~~~li~D~a~~~-~~~--~~~~~~~--~~  192 (385)
T 2bkw_A          124 VPLELITEKLSQ--NSYGAVTVTHVDTSTAVLSD----LKAISQAIKQTSPETFFVVDAVCSI-GCE--EFEFDEW--GV  192 (385)
T ss_dssp             CCHHHHHHHHHH--SCCSEEEEESEETTTTEECC----HHHHHHHHHHHCTTSEEEEECTTTT-TTS--CCCTTTT--TC
T ss_pred             CCHHHHHHHHhc--CCCCEEEEEccCCCcCeEcC----HHHHHHHHHhhCCCCEEEEECcccc-CCc--ccccccc--Cc
Confidence            389999999985  26789999999999999888    99999999999  999999999972 111  1222222  35


Q ss_pred             cEE--EecccccCCcccceeeEeCHHHHh-hcCC----------------------CCc---cCCCCCCHHHHHHHHHHH
Q 021893          123 DMV--ILGKALGGGVIPVSAVLADKEVML-CIQP----------------------GEH---GSTFGGNPLASAVAIASL  174 (306)
Q Consensus       123 d~~--s~sK~~~~G~~~~g~~~~~~~~~~-~~~~----------------------~~~---~~~~~~~~~~~~aa~~al  174 (306)
                      |++  +++|+++|+. ++|++++++++++ .+.+                      ...   ...++.+..++.++.+++
T Consensus       193 d~~~~s~~K~~~~~~-G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al  271 (385)
T 2bkw_A          193 DFALTASQKAIGAPA-GLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVAL  271 (385)
T ss_dssp             SEEEEESSSTTCCCS-CEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHH
T ss_pred             eEEEecCccccccCC-cceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHH
Confidence            554  6679998776 7799999988876 5421                      000   011356777777777888


Q ss_pred             HHHhhc---cHHHHHHHHHHHHHHHH-HHHHhhCCCceeeEE----EeeeEEEEEEecCCChhhHHHHHHHHHHCCceec
Q 021893          175 DVIRDE---KLAERSAHLGEELRQHL-FKIQQQFPNYVKEVR----GRGLFNAVEFDKTALPVSAYDICLKMKERGILAK  246 (306)
Q Consensus       175 ~~~~~~---~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~  246 (306)
                      +.+.+.   +..++++++++++.+.| +++  .+  .+....    ..+.++++.+++      ..++.+.|.++||.+.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--g~--~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~gi~v~  341 (385)
T 2bkw_A          272 KEILEEGLHKRWDLHREMSDWFKDSLVNGL--QL--TSVSRYPSNMSAHGLTAVYVAD------PPDVIAFLKSHGVVIA  341 (385)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHTTT--CC--EESSCSSSTTBCSSCEEEECSC------HHHHHHHHHHTTEECB
T ss_pred             HHHHHccHHHHHHHHHHHHHHHHHHHHHhc--Cc--eecccCcccccCCceEEEecCC------HHHHHHHHHHCCeEEe
Confidence            876543   35677777788888777 654  11  111111    246777877652      5689999999999998


Q ss_pred             cCC-----CCEEEEe-CC---CCCCHHHHHHHHHHHHHHHh
Q 021893          247 PTH-----DTIVRLT-PP---LSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       247 ~~~-----~~~lRi~-~~---~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ++.     .+++|++ ++   ..++++++++++++|+++++
T Consensus       342 ~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~  382 (385)
T 2bkw_A          342 GGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQ  382 (385)
T ss_dssp             CCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTT
T ss_pred             CCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHH
Confidence            752     5799999 44   24799999999999999887

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=99.83  E-value=4.8e-20  Score=167.41  Aligned_cols=221  Identities=13%  Similarity=0.053  Sum_probs=149.5

Q ss_pred             cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHH-cCCEEEEehhhhccccccccccccc
Q 021893           39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK-YNILMIADEIQSGLARSGRMLASDW  117 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~-~gi~li~De~~~g~~~~g~~~~~~~  117 (306)
                      +..++.+|+++|++.++   +++++|++++++|++|.+.+    +++|.++|++ ||+++|+||+|+++... ..+  + 
T Consensus       129 ~~~v~~~d~~~l~~~i~---~~t~~v~l~~p~NptG~v~~----l~~i~~la~~~~~~~li~De~~~~~~~~-~~~--~-  197 (404)
T 1e5e_A          129 VDFINTAIPGEVKKHMK---PNTKIVYFETPANPTLKIID----MERVCKDAHSQEGVLVIADNTFCSPMIT-NPV--D-  197 (404)
T ss_dssp             EEEECTTSTTHHHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHTSTTCEEEEECTTTCTTTC-CGG--G-
T ss_pred             EEEECCCCHHHHHHhcC---CCCcEEEEECCCCCCCcccC----HHHHHHHHHhhcCCEEEEECCCchhhhC-Ccc--c-
Confidence            35566679999999987   57999999999999999887    9999999999 99999999999965321 222  1 


Q ss_pred             CCCCCcEEEeccccc-CCcccc-eeeEeCHHHHh-hcCCCCccC-CCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893          118 EEVRPDMVILGKALG-GGVIPV-SAVLADKEVML-CIQPGEHGS-TFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL  193 (306)
Q Consensus       118 ~~~~~d~~s~sK~~~-~G~~~~-g~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l  193 (306)
                      ++....+.|+||+++ +|+ |+ ||+++++++++ .+....... +...+++.+.++..+++.+.  ...++..++.+.+
T Consensus       198 ~~~di~~~S~sK~~~~~g~-ri~G~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l  274 (404)
T 1e5e_A          198 FGVDVVVHSATKYINGHTD-VVAGLICGKADLLQQIRMVGIKDITGSVISPHDAWLITRGLSTLN--IRMKAESENAMKV  274 (404)
T ss_dssp             GTCSEEEEETTTTTTCSSC-CCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHH
T ss_pred             cCCEEEEEcCccccCCCCC-CeEEEEEECHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhHHH--HHHHHHHHHHHHH
Confidence            343344558999998 687 97 99999999887 776654443 44567888877777776432  1233445555555


Q ss_pred             HHHHHHHH----hhCC------Ccee---eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc---C---------
Q 021893          194 RQHLFKIQ----QQFP------NYVK---EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP---T---------  248 (306)
Q Consensus       194 ~~~L~~~~----~~~~------~~~~---~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~---~---------  248 (306)
                      .+.+++..    ..++      +...   ..++.|.++.+.+..     ...+..+.+.+.||.+..   +         
T Consensus       275 ~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~-----~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~  349 (404)
T 1e5e_A          275 AEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS-----GFEGAKKLLDNLKLITLAVSLGGCESLIQHP  349 (404)
T ss_dssp             HHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT-----HHHHHHHHHHTCSSSEESSCCCSSSCEEECG
T ss_pred             HHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC-----CHHHHHHHHHhCCCceeccCCCCcceeeecc
Confidence            55555431    0000      0000   012347777777653     123455556666874332   1         


Q ss_pred             ----------------C--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          249 ----------------H--DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       249 ----------------~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                                      +  ++++|++++.    ++++++++.|+++++ .+.+
T Consensus       350 ~~~~~~~~~~~~~~~~g~~~~~iRis~g~----e~~~~li~~l~~al~-~~~~  397 (404)
T 1e5e_A          350 ASMTHAVVPKEEREAAGITDGMIRLSVGI----EDADELIADFKQGLD-ALLR  397 (404)
T ss_dssp             GGTTTTTSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHHH-HHHC
T ss_pred             cccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHH-HHHH
Confidence                            1  5799999665    789999999999988 6543

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=99.83  E-value=5.6e-20  Score=166.58  Aligned_cols=255  Identities=11%  Similarity=0.060  Sum_probs=167.4

Q ss_pred             cceEEEEecCCCCcc--cchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCC
Q 021893            2 QAIIVSCCGCFHGRT--LAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPP   79 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~   79 (306)
                      +.+|++.+.+|++..  ..+....+. .....  +...+ ..-...|+++|++.+++.  ++++|+++.++++  ...+ 
T Consensus       109 gd~Vl~~~~~~~~~~~~~~~~~~~g~-~~~~~--~~~~~-~~~~~~d~~~l~~~l~~~--~~~~v~~~~p~~~--~~~~-  179 (407)
T 2dkj_A          109 GDTLMGMDLAAGGHLTHGSRVNFSGK-LYKVV--SYGVR-PDTELIDLEEVRRLALEH--RPKVIVAGASAYP--RFWD-  179 (407)
T ss_dssp             TCEEEEECGGGTCCGGGTCTTSHHHH-HSEEE--EECCC-TTTSSCCHHHHHHHHHHH--CCSEEEECCSSCC--SCCC-
T ss_pred             CCEEEEecccccCccchHHHHHhcCc-eEEEE--ecCCC-cccCccCHHHHHHHHhhc--CCeEEEEeccccC--CCCC-
Confidence            467899988887763  222222221 00100  11000 001235899999999852  5677777433332  4555 


Q ss_pred             hhHHHHHHHHHHHcCCEEEEehhhhc-ccccccccccccCCCCCcEE--EecccccCCcccceeeEeC-HHHHhhcCCCC
Q 021893           80 DGYLKAVRDLCSKYNILMIADEIQSG-LARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLAD-KEVMLCIQPGE  155 (306)
Q Consensus        80 ~~~l~~i~~l~~~~gi~li~De~~~g-~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~g~~~~~-~~~~~~~~~~~  155 (306)
                         +++|.++|++||+++|+||+|++ +...|....  ... .+|++  |+||+++ |. ++||++++ +++++.+....
T Consensus       180 ---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~--~~~-~~di~~~s~sK~l~-g~-~~G~~~~~~~~~~~~l~~~~  251 (407)
T 2dkj_A          180 ---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPN--PLP-YAHVVTSTTHKTLR-GP-RGGLILSNDPELGKRIDKLI  251 (407)
T ss_dssp             ---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCC--CTT-TCSEEEEESSGGGC-CC-SCEEEEESCHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHcCCEEEEEccccccccccCccCC--ccc-cccEEEEeccccCC-CC-CceEEEECCHHHHHHHHhhh
Confidence               99999999999999999999984 543443221  111 24655  8899887 45 77999999 78887765432


Q ss_pred             -ccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhH
Q 021893          156 -HGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSA  231 (306)
Q Consensus       156 -~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~  231 (306)
                       .....+.+...++++.++++....   ++..++++++.+++++.|++.+  +  .+...+..+.++++.++..  ..+.
T Consensus       252 ~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~--~~~~~~~~~~~~~~~~~~~--~~~~  325 (407)
T 2dkj_A          252 FPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRG--Y--RIVTGGTDNHLFLVDLRPK--GLTG  325 (407)
T ss_dssp             TTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT--C--EEGGGSCSSSEEEEECGGG--TCCH
T ss_pred             cccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCC--c--eeecCCCCceEEEEECccc--CCCH
Confidence             223334556566667777777543   4567788888888888888752  1  1111134678888887631  1356


Q ss_pred             HHHHHHHHHCCceeccC----------CCCEEEEeCCC----CCCHHHHHHHHHHHHHHHhhh
Q 021893          232 YDICLKMKERGILAKPT----------HDTIVRLTPPL----SISSNELQEGSKALHDVLELD  280 (306)
Q Consensus       232 ~~~~~~l~~~Gi~~~~~----------~~~~lRi~~~~----~~t~~~i~~~~~~l~~~l~~~  280 (306)
                      .++.+.|.++||.+.++          .++++|++++.    ..+++++++++++|+++++ +
T Consensus       326 ~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~-~  387 (407)
T 2dkj_A          326 KEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALL-E  387 (407)
T ss_dssp             HHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHH-H
T ss_pred             HHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHh-c
Confidence            78999999999998864          25689999754    3789999999999999998 6

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.83  E-value=2.6e-19  Score=162.20  Aligned_cols=246  Identities=15%  Similarity=0.098  Sum_probs=160.9

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+|++...+||+....+......         ....+..++.+|++++++.++   +++++|++++++|++|.+.+    
T Consensus       105 d~vl~~~~~~~~~~~~~~~~~~~---------~g~~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----  168 (398)
T 1gc0_A          105 DEVLLGNTLYGCTFAFLHHGIGE---------FGVKLRHVDMADLQALEAAMT---PATRVIYFESPANPNMHMAD----  168 (398)
T ss_dssp             CEEEEESSCCSHHHHHHHHTGGG---------GTCEEEEECTTCHHHHHHHCC---TTEEEEEEESSCTTTCCCCC----
T ss_pred             CEEEEeCCCchhHHHHHHHHHHH---------cCCEEEEECCCCHHHHHHhcC---CCCeEEEEECCCCCCccccc----
Confidence            56777777777754333211110         011234556679999999997   57999999999999999887    


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccc-eeeEeCHHHHh-hcCCCCcc-C
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPV-SAVLADKEVML-CIQPGEHG-S  158 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~-g~~~~~~~~~~-~~~~~~~~-~  158 (306)
                      +++|.++|++||+++|+||+|+.+. .+..+   .++.+..+.|++|.++ +|. |+ |+++++++.++ .+...... .
T Consensus       169 l~~i~~l~~~~~~~li~D~~~~~~~-~~~~~---~~~~d~~~~S~sK~~~~~~~-~~~G~l~~~~~~~~~~~~~~~~~~~  243 (398)
T 1gc0_A          169 IAGVAKIARKHGATVVVDNTYCTPY-LQRPL---ELGADLVVHSATKYLSGHGD-ITAGIVVGSQALVDRIRLQGLKDMT  243 (398)
T ss_dssp             HHHHHHHHGGGTCEEEEECTTTHHH-HCCGG---GGTCSEEEEETTTTTTCSSS-CCCEEEEECHHHHHHHHHTHHHHHT
T ss_pred             HHHHHHHHHHcCCEEEEECCCcccc-cCCch---hhCceEEEECCccccCCCCC-CeEEEEEEChHHHHHHHHHHhhccC
Confidence            9999999999999999999998431 12221   2344445568899999 566 87 89999987665 45543333 3


Q ss_pred             CCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----------hCCCcee---eEEEeeeEEEEEEecC
Q 021893          159 TFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----------QFPNYVK---EVRGRGLFNAVEFDKT  225 (306)
Q Consensus       159 ~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----------~~~~~~~---~~~~~g~~~~i~~~~~  225 (306)
                      +...+++.+.++..+++.+..  ..++..++.+.+.+.|++...          ..|+...   ..++.|.++.+.+.. 
T Consensus       244 ~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-  320 (398)
T 1gc0_A          244 GAVLSPHDAALLMRGIKTLNL--RMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG-  320 (398)
T ss_dssp             CCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT-
T ss_pred             CCCCCHHHHHHHHhccchHHH--HHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC-
Confidence            455678887777777765422  345556666666666665210          0000000   012467788887752 


Q ss_pred             CChhhHHHHHHHHHHCCceecc---C---------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          226 ALPVSAYDICLKMKERGILAKP---T---------------------------HDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       226 ~~~~~~~~~~~~l~~~Gi~~~~---~---------------------------~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                          ......+.+.+.|+....   +                           .++.+|++++..+++++++.+.+.|++
T Consensus       321 ----~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~  396 (398)
T 1gc0_A          321 ----GIGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA  396 (398)
T ss_dssp             ----HHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence                233455666666766432   1                           147999999999999999998888876


Q ss_pred             H
Q 021893          276 V  276 (306)
Q Consensus       276 ~  276 (306)
                      +
T Consensus       397 ~  397 (398)
T 1gc0_A          397 S  397 (398)
T ss_dssp             H
T ss_pred             c
Confidence            4

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=99.82  E-value=7.2e-21  Score=172.65  Aligned_cols=256  Identities=13%  Similarity=0.086  Sum_probs=160.5

Q ss_pred             EEEEecCCCCcccchhcccC--CccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893            5 IVSCCGCFHGRTLAAISMSC--DNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         5 ii~~~~~~hg~~~~~~~~~~--~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v   64 (306)
                      |++..|+-++...++..+..  + +..-...|.++.           ++.+|.       .|++.|++.+++. ++++++
T Consensus       100 i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~-~~~~~i  177 (405)
T 3k7y_A          100 TIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNI-PNGSSV  177 (405)
T ss_dssp             EEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHS-CSSCEE
T ss_pred             EEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhC-CCCeEE
Confidence            56677777665555544443  3 333333344433           233332       1789999999864 346677


Q ss_pred             EEccc-cCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc---cccc----ccCCCCCcEEEeccccc-CCc
Q 021893           65 LFEPI-QGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR---MLAS----DWEEVRPDMVILGKALG-GGV  135 (306)
Q Consensus        65 ~v~~~-~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~---~~~~----~~~~~~~d~~s~sK~~~-~G~  135 (306)
                      +++++ ||+||. +++++.+++|.++|++||+++|+||+|.++...+.   ..+.    +.......+.||||.++ +|+
T Consensus       178 ~l~~~~~NPTG~-~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~Gl  256 (405)
T 3k7y_A          178 ILQISCYNPCSV-NIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNMSLYGE  256 (405)
T ss_dssp             EECCSSCTTTCC-CCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTSCCTTT
T ss_pred             EEeCCCCCCCCC-CCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccCCCccc
Confidence            77665 899995 56899999999999999999999999998754321   1111    11111223449999999 999


Q ss_pred             ccceeeEe---CHHHHhhcCC----CCccCCCCCCHHHHHHHHHHHHHH------hh--ccHHHHHHHHHHHHHHHHH--
Q 021893          136 IPVSAVLA---DKEVMLCIQP----GEHGSTFGGNPLASAVAIASLDVI------RD--EKLAERSAHLGEELRQHLF--  198 (306)
Q Consensus       136 ~~~g~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~aa~~al~~~------~~--~~~~~~~~~~~~~l~~~L~--  198 (306)
                       |+||+++   ++++++.+..    .......+.+.+++.++..+++.-      .+  ....++++++++.+.+.|+  
T Consensus       257 -RiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~  335 (405)
T 3k7y_A          257 -RAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETY  335 (405)
T ss_dssp             -TEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -cceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence             9999853   5665544321    111122234567766666555431      11  2234556777777777777  


Q ss_pred             --HHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          199 --KIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       199 --~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                        +++... .+....+..|+++|+.++.        ++++.|.++||++.|++    ||+.. ..++++|++++++|+++
T Consensus       336 ~~~~g~~~-~~~~~~p~gg~f~~~~l~~--------~~~~~L~~~gV~v~p~~----Ris~a-~~~~~~i~~~~~~i~~~  401 (405)
T 3k7y_A          336 QKKYNLNY-DWNVYKKQRGLFSFVPLLA--------KIAEHLKTHHIYIINNG----RINVS-GITKNNVDYIADKICLS  401 (405)
T ss_dssp             GGGGTCCC-CGGGGSSCCSSEEECGGGG--------GGTTTTTTTTEECCTTS----EEEGG-GCCTTHHHHHHHHHHHH
T ss_pred             hhhcCCCC-CCccccCCceEEEecCCCH--------HHHHHHHHCCEeecCCC----eEEEe-ccCHHHHHHHHHHHHHH
Confidence              543110 1223345677777765432        34566677799999964    88842 35788999999999998


Q ss_pred             Hh
Q 021893          277 LE  278 (306)
Q Consensus       277 l~  278 (306)
                      ++
T Consensus       402 ~~  403 (405)
T 3k7y_A          402 LS  403 (405)
T ss_dssp             HH
T ss_pred             Hh
Confidence            87

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=99.82  E-value=3.3e-20  Score=170.71  Aligned_cols=220  Identities=12%  Similarity=0.136  Sum_probs=149.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc---ccccccC-CCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR---MLASDWE-EVR  121 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~---~~~~~~~-~~~  121 (306)
                      |++.|++.++++++++++++++.++|++|.. .+.+.+++|.++|++||+++|+||+|.++++.+.   ......+ ...
T Consensus       188 d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~-~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~  266 (448)
T 3meb_A          188 DFSNTKKDIQSAPEKSIFLFHACAHNPSGID-FTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAG  266 (448)
T ss_dssp             CHHHHHHHHHHSCTTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTT
T ss_pred             CHHHHHHHHHhCCCCcEEEEeCCCCCCCCcC-CCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcC
Confidence            8999999999765568898999999999965 5789999999999999999999999998765541   1111111 122


Q ss_pred             Cc---EEEeccccc-CCcccceee--Ee--------C-H----HHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh----
Q 021893          122 PD---MVILGKALG-GGVIPVSAV--LA--------D-K----EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR----  178 (306)
Q Consensus       122 ~d---~~s~sK~~~-~G~~~~g~~--~~--------~-~----~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~----  178 (306)
                      .+   +.|+||.++ .|+ |+||+  ++        + +    ++++.+.......+.+.+.+++.++..+++...    
T Consensus       267 ~~~i~~~S~SK~~g~~G~-RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~  345 (448)
T 3meb_A          267 VEVLVAQSFSKNFGLYGE-RIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQM  345 (448)
T ss_dssp             CCEEEEEECTTTSCCGGG-CCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHH
T ss_pred             CcEEEEecccccCCCccc-cceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHH
Confidence            33   559999999 899 99997  55        3 4    555555432333444566777777776654321    


Q ss_pred             ----hccHHHHHHHHHHHHHHHHHHHHhhCCC------ceeeEEEeeeEEEEEEecCCChhhHHHHHHHH-HHCCceecc
Q 021893          179 ----DEKLAERSAHLGEELRQHLFKIQQQFPN------YVKEVRGRGLFNAVEFDKTALPVSAYDICLKM-KERGILAKP  247 (306)
Q Consensus       179 ----~~~~~~~~~~~~~~l~~~L~~~~~~~~~------~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l-~~~Gi~~~~  247 (306)
                          .++..++++++++.+.+.|++..  .++      +....+..|++.|..++        .+++..| .++||++.|
T Consensus       346 ~~~~~~~~~~~~~~~r~~l~~~L~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~~~ll~~~gV~v~~  415 (448)
T 3meb_A          346 FYDNVKEMSARIHRMRSLLHASLAKRK--TPGPGSKGTWDHILTAIGMFTFTGLT--------PEHVDYLKEKWSIYLVK  415 (448)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTT--CCCSTTTCCCTHHHHCCSSEEECCCC--------HHHHHHHHHHHCEEECS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhC--CCCcCcccccceeCCCceEEEecCCC--------HHHHHHHHHhCCEEEeC
Confidence                13355667777777777777652  111      22223445666554432        2455555 566999998


Q ss_pred             CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          248 THDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       248 ~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +.   .|+++. ..++++|++++++|+++++ ++.
T Consensus       416 G~---gRis~a-~~~~~~i~~~~~~l~~~l~-~~~  445 (448)
T 3meb_A          416 AG---GRMSMC-GLTESNCDYVAEAIHDAVT-KLP  445 (448)
T ss_dssp             GG---GEEEGG-GCCTTTHHHHHHHHHHHHH-HSC
T ss_pred             CC---cEEEEe-cCCHHHHHHHHHHHHHHHH-hcc
Confidence            53   288864 3366779999999999998 554

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=99.82  E-value=2.3e-20  Score=168.97  Aligned_cols=218  Identities=18%  Similarity=0.099  Sum_probs=141.7

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc---cccc----ccC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR---MLAS----DWE  118 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~---~~~~----~~~  118 (306)
                      |++.+++.+++..++++++++++++|++|.. .+.+.+++|.++|++||+++|+||+|.+++..+.   ..+.    +..
T Consensus       161 d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~  239 (401)
T 7aat_A          161 DFTGAMEDISKIPEKSIILLHACAHNPTGVD-PRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQG  239 (401)
T ss_dssp             CHHHHHHHHTTSCTTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTT
T ss_pred             CHHHHHHHHHhCCCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcC
Confidence            6888888888755678999999999999964 6899999999999999999999999998765442   1111    112


Q ss_pred             CCCCcEEEeccccc-CCcccceeeEe---CHH----HHhhcCCCCccCCCCCCHHHHHHHHHHHHHH------h--hccH
Q 021893          119 EVRPDMVILGKALG-GGVIPVSAVLA---DKE----VMLCIQPGEHGSTFGGNPLASAVAIASLDVI------R--DEKL  182 (306)
Q Consensus       119 ~~~~d~~s~sK~~~-~G~~~~g~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~------~--~~~~  182 (306)
                      .....+.|+||.++ +|+ |+||+++   +++    +.+.+.........+.+..++.++...++..      .  .++.
T Consensus       240 ~~~i~~~S~sK~~~~~G~-RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  318 (401)
T 7aat_A          240 IDVVLSQSYAKNMGLYGE-RAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGM  318 (401)
T ss_dssp             CCCEEEEECTTTSCCGGG-CEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             CcEEEEecCCcccccccC-ceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence            22334469999999 899 9999876   555    3343332222223344455555554444211      1  1334


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCC
Q 021893          183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSIS  262 (306)
Q Consensus       183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t  262 (306)
                      .++++++++++.+.|++.... +.+....+..|.++|+.++       .+.+...+.++||.+.++    +|++++.. +
T Consensus       319 ~~~~~~~r~~l~~~L~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~ll~~~gi~v~~~----~Ris~~~~-~  385 (401)
T 7aat_A          319 ADRIISMRTQLVSNLKKEGSS-HNWQHITDQIGMFCFTGLK-------PEQVERLTKEFSIYMTKD----GRISVAGV-A  385 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCC-SCCHHHHHCCSSEEECCCC-------HHHHHHHHHHHCEECCTT----CEEEGGGC-C
T ss_pred             HHHHHHHHHHHHHHHHhcCCC-CCCceecCCcceEEecCCC-------HHHHHHHHHhCCEeccCC----CeEEeccC-C
Confidence            567777777777777765311 0122223445666564332       333434445679999765    68887654 4


Q ss_pred             HHHHHHHHHHHHHHHh
Q 021893          263 SNELQEGSKALHDVLE  278 (306)
Q Consensus       263 ~~~i~~~~~~l~~~l~  278 (306)
                      .++|++++++|+++++
T Consensus       386 ~~~i~~~~~~l~~~~~  401 (401)
T 7aat_A          386 SSNVGYLAHAIHQVTK  401 (401)
T ss_dssp             TTTHHHHHHHHHHHHC
T ss_pred             hhhHHHHHHHHHHHhC
Confidence            4559999999988763

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.82  E-value=3.4e-20  Score=168.80  Aligned_cols=217  Identities=18%  Similarity=0.172  Sum_probs=144.4

Q ss_pred             CcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccccc
Q 021893           38 GHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW  117 (306)
Q Consensus        38 ~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~  117 (306)
                      .+..++.+|+++|+++++   +++++|++++++|++|.+.+    +++|.++|++||++||+||+|+.    +.......
T Consensus       147 ~~~~v~~~d~~~l~~ai~---~~t~~v~le~p~NptG~~~~----l~~i~~la~~~g~~livDe~~~~----~~~~~~~~  215 (414)
T 3ndn_A          147 QTVFVDGDDLSQWERALS---VPTQAVFFETPSNPMQSLVD----IAAVTELAHAAGAKVVLDNVFAT----PLLQQGFP  215 (414)
T ss_dssp             EEEEECTTCHHHHHHHTS---SCCSEEEEESSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTTH----HHHCCCGG
T ss_pred             EEEEeCCCCHHHHHHhcC---CCCeEEEEECCCCCCCcccc----HHHHHHHHHHcCCEEEEECCCcc----cccCCchh
Confidence            346677789999999997   57899999999999999887    99999999999999999999972    11111113


Q ss_pred             CCCCCcEEEecccccC-C-cccceeeEeCHHHHh-hcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 021893          118 EEVRPDMVILGKALGG-G-VIPVSAVLADKEVML-CIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELR  194 (306)
Q Consensus       118 ~~~~~d~~s~sK~~~~-G-~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~  194 (306)
                      ++.+..+.|+||.+++ | + ++|+++++++.+. .++..........++..+.++...++.+..  ..++..++.+.+.
T Consensus       216 ~g~div~~S~sK~l~~~G~~-~~G~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~~l~~--r~~~~~~~a~~l~  292 (414)
T 3ndn_A          216 LGVDVVVYSGTKHIDGQGRV-LGGAILGDREYIDGPVQKLMRHTGPAMSAFNAWVLLKGLETLAI--RVQHSNASAQRIA  292 (414)
T ss_dssp             GTCSEEEEETTTTTTCSSCC-CCEEEEECHHHHTTHHHHHHHHHCCCCCHHHHHHHHHHGGGHHH--HHHHHHHHHHHHH
T ss_pred             cCCCeEeccCCccccCCCCc-eEEEEEECHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence            3445556688999985 6 6 8999999988765 444221222223455655555555544422  2445556666666


Q ss_pred             HHHHHHHhhCCCceee------------------EEEeeeEEEEEEecCCC--hhhHHHHHHHHHHCCceeccC------
Q 021893          195 QHLFKIQQQFPNYVKE------------------VRGRGLFNAVEFDKTAL--PVSAYDICLKMKERGILAKPT------  248 (306)
Q Consensus       195 ~~L~~~~~~~~~~~~~------------------~~~~g~~~~i~~~~~~~--~~~~~~~~~~l~~~Gi~~~~~------  248 (306)
                      +.|++.    | .+..                  .++.|.++++.++....  ......|.+.|...++.++.+      
T Consensus       293 ~~L~~~----p-~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~  367 (414)
T 3ndn_A          293 EFLNGH----P-SVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKMRLIDISNNLGDAKSLV  367 (414)
T ss_dssp             HHHHTC----T-TEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHCSSSEECSCCSCSSCEE
T ss_pred             HHHhcC----C-CEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhCccceEcCCCCCCCcee
Confidence            666553    1 1211                  23468899999964100  134667777777666554432      


Q ss_pred             ---------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          249 ---------------------HDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       249 ---------------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                                           .++.||++.+.    ++++.+++.|++++
T Consensus       368 ~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~----e~~~dli~dl~~al  413 (414)
T 3ndn_A          368 THPATTTHRAMGPEGRAAIGLGDGVVRISVGL----EDTDDLIADIDRAL  413 (414)
T ss_dssp             ECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHH
T ss_pred             eCccccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence                                 25789999543    56677777777765

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=99.82  E-value=3.8e-19  Score=159.57  Aligned_cols=215  Identities=17%  Similarity=0.128  Sum_probs=147.7

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      .|+++|++.++   +++++|++++++|++|.+.+    +++|.++|++||++ |+||+|+ ++..  .+....++.+.-+
T Consensus       126 ~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~-i~D~a~~-~g~~--~~~~~~~~~di~~  194 (382)
T 4eb5_A          126 VDVSFIDQKLR---DDTILVSVQHANNEIGTIQP----VEEISEVLAGKAAL-HIDATAS-VGQI--EVDVEKIGADMLT  194 (382)
T ss_dssp             BCHHHHHHHCC---TTEEEEECCSBCTTTCBBCC----HHHHHHHHTTSSEE-EEECTTT-BTTB--CCCHHHHTCSEEE
T ss_pred             cCHHHHHHHhc---CCCeEEEEeccCCCccccCC----HHHHHHHHHHCCCE-EEEcchh-cCCc--ccCccccCCCEEE
Confidence            37999999987   46899999999999999887    99999999999999 9999998 3221  1212222222223


Q ss_pred             EEecccccCCcccceeeEeCHHHHhhcCCCC-------ccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHH
Q 021893          125 VILGKALGGGVIPVSAVLADKEVMLCIQPGE-------HGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQ  195 (306)
Q Consensus       125 ~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~  195 (306)
                      .|+||.++ .. ++|+++++++.  .+.+..       .....+.+...+.++.++++.+.+  ++..++++++++++.+
T Consensus       195 ~s~sK~~g-~~-g~G~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~  270 (382)
T 4eb5_A          195 ISSNDIYG-PK-GVGALWIRKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIID  270 (382)
T ss_dssp             EETGGGTC-CS-SCEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eehHHhcC-CC-ceEEEEEcccc--ccCceecCCCccccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence            47779754 22 47888887763  222211       112234566677777777776654  3345666666666666


Q ss_pred             HHHHHHhhCCCceeeEEE---eeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----------------------
Q 021893          196 HLFKIQQQFPNYVKEVRG---RGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----------------------  249 (306)
Q Consensus       196 ~L~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----------------------  249 (306)
                      .|+++    ++.....+.   .+.++++.++.    .+..++.+.|.++||.+.++.                       
T Consensus       271 ~L~~~----~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~  342 (382)
T 4eb5_A          271 NVLKI----EESYLNGHPEKRLPNNVNVRFSY----IEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEA  342 (382)
T ss_dssp             HHTTS----TTEEECSCSSSBCTTEEEEEETT----SCHHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHH
T ss_pred             HHhhC----CCeEEeCCcccCCCCEEEEEeCC----cCHHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhcc
Confidence            66553    212111111   25566776652    456789999999999998753                       


Q ss_pred             CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          250 DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       250 ~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      .+++|++++..++++++++++++|+++++ ++.+
T Consensus       343 ~~~iRi~~~~~~~~~~i~~~~~~l~~~~~-~~~~  375 (382)
T 4eb5_A          343 HGTLLLTLGRYNTDEDVDRLLEVLPGVIE-RLRS  375 (382)
T ss_dssp             TTEEEEECCTTCCHHHHHHHHHHHHHHHH-HHHH
T ss_pred             CCeEEEECCCCCCHHHHHHHHHHHHHHHH-HHHH
Confidence            47999998888899999999999999998 7665

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.81  E-value=1.5e-19  Score=166.74  Aligned_cols=221  Identities=10%  Similarity=0.089  Sum_probs=143.5

Q ss_pred             cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893           39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE  118 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~  118 (306)
                      +..++.+|+++|+++++   +++++|++++++|++|.+.+    +++|.++|++||+++|+||+|... .....  .+ +
T Consensus       199 v~~v~~~d~~~l~~~i~---~~tk~v~l~~p~NptG~v~~----l~~i~~la~~~gi~livDea~~~g-~~~~~--~~-~  267 (464)
T 1ibj_A          199 VKRVNTTKLDEVAAAIG---PQTKLVWLESPTNPRQQISD----IRKISEMAHAQGALVLVDNSIMSP-VLSRP--LE-L  267 (464)
T ss_dssp             EEEECTTSHHHHHHHCC---SSEEEEEECSSCTTTCCCCC----HHHHHHHHHTTTCEEEEECTTTCT-TTCCG--GG-T
T ss_pred             EEEeCCCCHHHHHHHhc---cCceEEEEeCCCCCCCEeec----HHHHHHHHHHcCCEEEEECCCccc-ccCCh--hh-c
Confidence            35666779999999997   57999999999999999887    999999999999999999999731 11111  12 2


Q ss_pred             CCCCcEEEecccccC--CcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 021893          119 EVRPDMVILGKALGG--GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ  195 (306)
Q Consensus       119 ~~~~d~~s~sK~~~~--G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~  195 (306)
                      +.+..+.|++|++++  |+ ++||++++ +++++.+...........+++.+.++.++++.+..  ..++..+....+.+
T Consensus       268 ~~div~~S~sK~~~g~~Gl-~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~~~~--r~~~~~~~~~~l~~  344 (464)
T 1ibj_A          268 GADIVMHSATKFIAGHSDV-MAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMAL--RIEKQQENARKIAM  344 (464)
T ss_dssp             TCSEEEEETTTTTTCSSCC-CCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHH
T ss_pred             CCEEEEECCcccccCCCCC-cEEEEEEChHHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhHHH--HHHHHHHHHHHHHH
Confidence            333334488999985  88 99999998 47777665432223344567777777766653321  11222222233333


Q ss_pred             HHHHHH----------hhCCCcee---eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-------------
Q 021893          196 HLFKIQ----------QQFPNYVK---EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-------------  249 (306)
Q Consensus       196 ~L~~~~----------~~~~~~~~---~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------------  249 (306)
                      .+++..          ...|+...   ...+.|.++++.+..   ......+.+.|...|+.++++.             
T Consensus       345 ~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~---~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~  421 (464)
T 1ibj_A          345 YLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS---VALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSH  421 (464)
T ss_dssp             HHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSC---HHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTT
T ss_pred             HHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECC---HHHHHHHHHhcCcceEeecCCCCceeeeccccccc
Confidence            333210          01110100   112356788888742   2234467888776777665432             


Q ss_pred             --------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          250 --------------DTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       250 --------------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                                    ++++|++++.    +++++++++|+++++ .+
T Consensus       422 ~~~~~~~~~~~g~~~~~iRlsvg~----edi~~li~~L~~al~-~~  462 (464)
T 1ibj_A          422 ASIPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFK-TF  462 (464)
T ss_dssp             CSCCSSSSSSSSCCTTCEEEECCS----SCHHHHHHHHHHHHH-SC
T ss_pred             ccCCHHHHHhcCCCcCeEEEEeCC----CCHHHHHHHHHHHHh-hc
Confidence                          4689999765    889999999999988 54

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=99.81  E-value=2.5e-19  Score=158.90  Aligned_cols=221  Identities=18%  Similarity=0.199  Sum_probs=149.6

Q ss_pred             CHHHHHHHHHhc---CCcEEEEEEccccCCC-CcccCChhHHHHHHHHHHHcCCEEEEehhhhc--ccccccccccccCC
Q 021893           46 DITALEKIFKES---GDQIAGFLFEPIQGEA-GVIIPPDGYLKAVRDLCSKYNILMIADEIQSG--LARSGRMLASDWEE  119 (306)
Q Consensus        46 d~~~le~~i~~~---~~~~~~v~v~~~~~~~-G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g--~~~~g~~~~~~~~~  119 (306)
                      |+++|+++++++   .+++++|++++++|++ | .+.+.+.+++|.++|++||+++|+||+|..  +...+.....-...
T Consensus       115 d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G-~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~  193 (347)
T 1jg8_A          115 DPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGG-RVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGY  193 (347)
T ss_dssp             CHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTS-BCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHT
T ss_pred             CHHHHHHHhccccccccCceEEEEeccccccCC-ccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhccc
Confidence            899999999742   1368999999999998 6 556788899999999999999999998751  11122111000012


Q ss_pred             CCCcEEEecccccCCcccce-eeEeCHHHHhhcCCC--CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 021893          120 VRPDMVILGKALGGGVIPVS-AVLADKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQH  196 (306)
Q Consensus       120 ~~~d~~s~sK~~~~G~~~~g-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~  196 (306)
                      .+.-++++||+++++   +| +++.++++++.+...  ....+...+.+..+++..+++... +.+ ++..++.+.+++.
T Consensus       194 ~d~~~~s~sK~l~~~---~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~-~~~~~~~~~l~~~  268 (347)
T 1jg8_A          194 ADSVMFCLSKGLCAP---VGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMV-DRL-KEDHENARFLALK  268 (347)
T ss_dssp             CSEEEEESSSTTCCS---SCEEEEECHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSS-TTH-HHHHHHHHHHHHH
T ss_pred             ccEEEEecccccCCC---ceEEEEcCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHHHH
Confidence            222245789999743   45 566788877665432  112223345555556666665432 223 3444567888888


Q ss_pred             HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      |++..  +  .+...+..+.++++.++..  ..+..++++.|.++||.+.+.+.+++|++++..++++++++++++|+++
T Consensus       269 L~~~~--~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~~~~~~iRl~~~~~~~~e~i~~~~~~l~~~  342 (347)
T 1jg8_A          269 LKEIG--Y--SVNPEDVKTNMVILRTDNL--KVNAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEKL  342 (347)
T ss_dssp             HHHHT--C--BCCGGGCCSSEEEEECTTS--SSCHHHHHHHHHHHTEECEEEETTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             HHhcC--c--eeccCCCcceEEEEEcccc--cCCHHHHHHHHHHCCCEEecCCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            87762  2  1111234566778777521  2357789999999999999877789999988888999999999999998


Q ss_pred             Hh
Q 021893          277 LE  278 (306)
Q Consensus       277 l~  278 (306)
                      ++
T Consensus       343 l~  344 (347)
T 1jg8_A          343 FR  344 (347)
T ss_dssp             HH
T ss_pred             HH
Confidence            87

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.81  E-value=9.1e-19  Score=162.22  Aligned_cols=241  Identities=18%  Similarity=0.177  Sum_probs=163.9

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCC-----CHHHHHHHHHhcCCcEEEEEEccccCCCCcc-c
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----DITALEKIFKESGDQIAGFLFEPIQGEAGVI-I   77 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~-~   77 (306)
                      +||+.. .+|+.+..+....+-            .++.+|.+     |+++|+++++   +++++|++++++ ++|.+ .
T Consensus       158 ~Vlv~~-~~h~~~~~~~~~~G~------------~vv~v~~~~~~~~d~~~L~~~i~---~~t~~v~~~~pn-~~G~~~~  220 (474)
T 1wyu_B          158 VVLVPD-SAHGSNPATASMAGY------------QVREIPSGPEGEVDLEALKRELG---PHVAALMLTNPN-TLGLFER  220 (474)
T ss_dssp             EEEEET-TSCTHHHHHHHHTTC------------EEEEECBCTTSSBCHHHHHHHCS---TTEEEEEECSSC-TTSCCCT
T ss_pred             EEEEeC-CcChhhHHHHHHCCC------------EEEEecCCCCCCcCHHHHHHhhC---CCceEEEEECCC-CCcccCC
Confidence            555544 777877665544331            11222322     8999999997   468999998864 68866 3


Q ss_pred             CChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEe--ccccc-----CCcccceeeEeCHHHHhh
Q 021893           78 PPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVIL--GKALG-----GGVIPVSAVLADKEVMLC  150 (306)
Q Consensus        78 ~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~--sK~~~-----~G~~~~g~~~~~~~~~~~  150 (306)
                      +    +++|.++|++||+++|+||+|.... .|. .....+  .+|++++  +|+++     ||+ ++|++++++++++.
T Consensus       221 ~----l~~i~~l~~~~g~~li~Dea~~~~~-~g~-~~~~~~--g~di~~~s~~K~~~~p~g~gG~-~~G~~~~~~~l~~~  291 (474)
T 1wyu_B          221 R----ILEISRLCKEAGVQLYYDGANLNAI-MGW-ARPGDM--GFDVVHLNLHKTFTVPHGGGGP-GSGPVGVKAHLAPY  291 (474)
T ss_dssp             T----HHHHHHHHHHHTCEEEEEGGGGGGT-TTT-CCHHHH--TCSEEECCTTTTTCCCCTTSCC-CCCCEEECGGGGGG
T ss_pred             C----HHHHHHHHHHcCCEEEEeCchhhhh-ccC-CCcccC--CCcEEEEeCccccccCCCCCCC-CeEEEEEcHHHHHh
Confidence            5    9999999999999999999997321 221 111222  3677655  79886     357 89999999998877


Q ss_pred             cCCC-------------------CccCCCCCCHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHHHHHHhhCCCce
Q 021893          151 IQPG-------------------EHGSTFGGNPLASAVAIASLDVIRDEKL---AERSAHLGEELRQHLFKIQQQFPNYV  208 (306)
Q Consensus       151 ~~~~-------------------~~~~~~~~~~~~~~aa~~al~~~~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~  208 (306)
                      +...                   ....+++.+.+++.++.+.++.+..+++   .++..++++++.+.|++.+  +. ..
T Consensus       292 l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g--~~-~~  368 (474)
T 1wyu_B          292 LPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKG--YR-VP  368 (474)
T ss_dssp             CCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CB-CS
T ss_pred             CCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--cE-ec
Confidence            7521                   0112334677788888888876544333   6777888888888888752  21 11


Q ss_pred             eeEEEeeeE--EEEEEecCCChhhHHHHHHHHHHCCceecc-----CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhh
Q 021893          209 KEVRGRGLF--NAVEFDKTALPVSAYDICLKMKERGILAKP-----THDTIVRLTPPLSISSNELQEGSKALHDVLELD  280 (306)
Q Consensus       209 ~~~~~~g~~--~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~-----~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~  280 (306)
                      .  .+ +.+  +++.++.   +.+..++++.|.++||.+..     ...+++|++++..++++++++++++|+++++ +
T Consensus       369 ~--~~-~~~~~~~~~~~~---~~~~~~l~~~L~~~Gi~~~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~-~  440 (474)
T 1wyu_B          369 Y--DG-PSMHEFVAQPPE---GFRALDLAKGLLELGFHPPTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGALLK-K  440 (474)
T ss_dssp             S--CS-SCCSCEEEBCST---TCCHHHHHHHHHHTTCCCCEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHHHHT-S
T ss_pred             C--CC-CcceEEEEEcCC---CCCHHHHHHHHHHCCccccccccccccCCEEEEEeecCCCHHHHHHHHHHHHHHHH-h
Confidence            1  11 111  3444421   34678899999999998531     1257899999888899999999999999988 5

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.81  E-value=7.2e-19  Score=162.38  Aligned_cols=227  Identities=16%  Similarity=0.109  Sum_probs=148.0

Q ss_pred             CCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc---c-------ccccccc
Q 021893           45 GDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG---L-------ARSGRML  113 (306)
Q Consensus        45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g---~-------~~~g~~~  113 (306)
                      .|+++||++|++++ +++++|++++++|++|..+++.+.+++|+++|++||++||+||++..   +       ++.+..+
T Consensus       167 ~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~  246 (467)
T 1ax4_A          167 FDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATI  246 (467)
T ss_dssp             BCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCH
T ss_pred             cCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCch
Confidence            38999999998653 36999999999999855778899999999999999999999998752   1       1222111


Q ss_pred             ccccCC----CCCcEE--EecccccCCcccc-eeeEeC-H-HHHhhcCCCC----ccCCCCC-CHHHHHHHHHHHHHHhh
Q 021893          114 ASDWEE----VRPDMV--ILGKALGGGVIPV-SAVLAD-K-EVMLCIQPGE----HGSTFGG-NPLASAVAIASLDVIRD  179 (306)
Q Consensus       114 ~~~~~~----~~~d~~--s~sK~~~~G~~~~-g~~~~~-~-~~~~~~~~~~----~~~~~~~-~~~~~~aa~~al~~~~~  179 (306)
                        ....    ..+|++  ++||.++  . ++ |+++.+ + ++++.+....    ...++.. +...+.++..+++.+.+
T Consensus       247 --~~~~~~~~~~~d~~~~s~sK~~g--~-~~Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~  321 (467)
T 1ax4_A          247 --KEVIFDMYKYADALTMSAKKDPL--L-NIGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE  321 (467)
T ss_dssp             --HHHHHHHGGGCSEEEEETTSTTC--C-SSCEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC
T ss_pred             --hhhhhhhccccceEEEeccccCC--C-CcceEEEeCCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh
Confidence              0000    123544  6678775  3 54 456666 6 7776554211    1122322 22233333335554433


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE-------EecCCChhhHHHHHHHH-HHCCceecc-C--
Q 021893          180 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE-------FDKTALPVSAYDICLKM-KERGILAKP-T--  248 (306)
Q Consensus       180 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~-------~~~~~~~~~~~~~~~~l-~~~Gi~~~~-~--  248 (306)
                      ++..++..++.+++++.|++.  .+   ....+..|.++|+.       ++.  ...+..++++.| .++||.+.+ +  
T Consensus       322 ~~~~~~~~~~~~~l~~~L~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~L~~~~gv~v~~~g~~  394 (467)
T 1ax4_A          322 EEYLHYRIGQVKYLGDRLREA--GI---PIQYPTGGHAVFVDCKKLVPQIPG--DQFPAQAVINALYLESGVRAVEIGSF  394 (467)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT--TC---CBCSSCCSSEEEEESTTTCTTSCG--GGCHHHHHHHHHHHHHCEECEEESHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhC--CC---CcccCCCceEEEEehhhhcccccc--CCCCHHHHHHHHHHhcCceeeecCcc
Confidence            334555557778888888772  22   11223456677776       321  123467899999 888999876 2  


Q ss_pred             --------C------CCEEEEeCC-CCCCHHHHHHHHHHHHHHHhhhcCCC
Q 021893          249 --------H------DTIVRLTPP-LSISSNELQEGSKALHDVLELDLPKM  284 (306)
Q Consensus       249 --------~------~~~lRi~~~-~~~t~~~i~~~~~~l~~~l~~~~~~~  284 (306)
                              +      .+++|++++ ..+|++++++++++|+++++ +..+.
T Consensus       395 ~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~-~~~~~  444 (467)
T 1ax4_A          395 LLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKE-KFATL  444 (467)
T ss_dssp             HHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHH-HHTTC
T ss_pred             ccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHH-hhhcC
Confidence                    1      279999988 44899999999999999998 76543

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.81  E-value=1.5e-18  Score=160.19  Aligned_cols=229  Identities=17%  Similarity=0.114  Sum_probs=145.5

Q ss_pred             CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc----------cccccccc-
Q 021893           46 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG----------LARSGRML-  113 (306)
Q Consensus        46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g----------~~~~g~~~-  113 (306)
                      |+++||++|++++ +++++|++++++|++|..+++.+++++|+++|++||++||+|++|..          .+..|... 
T Consensus       168 d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~  247 (467)
T 2oqx_A          168 DLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIE  247 (467)
T ss_dssp             CHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHH
T ss_pred             CHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHH
Confidence            8999999998643 46999999999998755777899999999999999999999966542          12223211 


Q ss_pred             ccc---cCCCCCcEEEecccccCCcccceeeEeCHH----HHhhcCCC----CccCCCCC-CHHHHHHHHHHHHHHhhcc
Q 021893          114 ASD---WEEVRPDMVILGKALGGGVIPVSAVLADKE----VMLCIQPG----EHGSTFGG-NPLASAVAIASLDVIRDEK  181 (306)
Q Consensus       114 ~~~---~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~----~~~~~~~~----~~~~~~~~-~~~~~~aa~~al~~~~~~~  181 (306)
                      .+.   ....+..+.+++|+++...  .|+++++++    .+..+++.    ....++.. +..++++...+++...+++
T Consensus       248 ~~~~~~~~~~d~~~~s~sK~~g~~~--Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~~~  325 (467)
T 2oqx_A          248 QITRETYKYADMLAMSAKKDAMVPM--GGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLD  325 (467)
T ss_dssp             HHHHHHGGGCSEEEEESSSTTCCSS--CEEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTCHH
T ss_pred             HHhhhhhccCCeEEEecccccCCCC--ceEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhhHH
Confidence            010   0111222457889886322  246777655    33333221    01111222 2223222223323222223


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec--C--CChh-hHHHHHHHH-HHCCceeccCC------
Q 021893          182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK--T--ALPV-SAYDICLKM-KERGILAKPTH------  249 (306)
Q Consensus       182 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~--~--~~~~-~~~~~~~~l-~~~Gi~~~~~~------  249 (306)
                      ..++..++.+++++.|++.  .++ .  . +..+.++++.+..  .  .... ....+++.| .++||.+.|++      
T Consensus       326 ~~~~~~~~~~~l~~~L~~~--~~~-~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~  399 (467)
T 2oqx_A          326 WLAYRIAQVQYLVDGLEEI--GVV-C--Q-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGR  399 (467)
T ss_dssp             HHHHHHHHHHHHHHHHHHT--TCC-E--E-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCB
T ss_pred             HHHHHHHHHHHHHHHHHHC--CCe-e--e-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccc
Confidence            4556677888888888876  221 2  2 4567777887642  1  1111 156678888 88899988732      


Q ss_pred             -----------CCEEEEeCCCC-CCHHHHHHHHHHHHHHHhhhcCC
Q 021893          250 -----------DTIVRLTPPLS-ISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       250 -----------~~~lRi~~~~~-~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                                 .+++|++++.. ++++++++++++|+++++ +..+
T Consensus       400 ~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~-~~~~  444 (467)
T 2oqx_A          400 DPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKE-NAAN  444 (467)
T ss_dssp             CTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHH-SGGG
T ss_pred             cccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHh-hhhh
Confidence                       27999999888 999999999999999998 7543

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.81  E-value=4.4e-19  Score=160.56  Aligned_cols=218  Identities=13%  Similarity=0.093  Sum_probs=152.6

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-CCc
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-RPD  123 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~~d  123 (306)
                      .|+++|++.++++  ++++|++++.++  |...+    +++|.++|++||++||+||+|+ ++..+.....  ..+ .+|
T Consensus       150 ~d~~~l~~~i~~~--~~~~v~~~~~~~--~~~~~----l~~i~~l~~~~~~~li~Dea~~-~g~~~~~~~~--~~~~~~d  218 (405)
T 2vi8_A          150 IDYDDVREKARLH--RPKLIVAAAAAY--PRIID----FAKFREIADEVGAYLMVDMAHI-AGLVAAGLHP--NPVPYAH  218 (405)
T ss_dssp             BCHHHHHHHHHHH--CCSEEEECCSSC--CSCCC----HHHHHHHHHHHTCEEEEECTTT-HHHHHTTSSC--CSTTTCS
T ss_pred             cCHHHHHHHHHhc--CCeEEEEeCCCC--CccCC----HHHHHHHHHHcCCEEEEEcccc-ccccccCcCC--CccccCC
Confidence            4899999999853  467788765433  33444    9999999999999999999998 2222221111  111 356


Q ss_pred             EE--EecccccCCcccceeeEeCHHHHhhcCCCCccCCCC-CCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHH
Q 021893          124 MV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG-GNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHL  197 (306)
Q Consensus       124 ~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L  197 (306)
                      ++  |+||+++|+. + |++++++++++.+.+......+. .++..++++.++++.+..   ++..++++++++++++.|
T Consensus       219 i~~~s~sK~~~g~~-g-G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L  296 (405)
T 2vi8_A          219 FVTTTTHKTLRGPR-G-GMILCQEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASAL  296 (405)
T ss_dssp             EEEEESSSTTCCCS-C-EEEEECHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeccccCCCCC-C-eEEEEcHHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence            55  8899998765 5 99999988887765432222233 355666666677876643   456788888888888888


Q ss_pred             HHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----------CCCEEEEeCCC----CCCH
Q 021893          198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----------HDTIVRLTPPL----SISS  263 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------~~~~lRi~~~~----~~t~  263 (306)
                      ++++  +  .+....+.+.++++.++..  +.+..++.+.|.++||.+.++          .++++|++++.    .+++
T Consensus       297 ~~~g--~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~  370 (405)
T 2vi8_A          297 QNEG--F--TLVSGGTDNHLLLVDLRPQ--QLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGL  370 (405)
T ss_dssp             HHTT--C--EEGGGSCSSSEEEEECGGG--TCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCH
T ss_pred             HhCC--C--eEecCCCCceEEEEEccCC--CCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCH
Confidence            8762  2  1111123577888887631  135678899999999998863          25689999875    5789


Q ss_pred             HHHHHHHHHHHHHHhhhcC
Q 021893          264 NELQEGSKALHDVLELDLP  282 (306)
Q Consensus       264 ~~i~~~~~~l~~~l~~~~~  282 (306)
                      +++++++++|+++++ ++.
T Consensus       371 ~~i~~~~~~l~~~~~-~~~  388 (405)
T 2vi8_A          371 EEMDEIAAIIGLVLK-NVG  388 (405)
T ss_dssp             HHHHHHHHHHHHHHT-CTT
T ss_pred             HHHHHHHHHHHHHHh-ccc
Confidence            999999999999998 664

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=99.81  E-value=1.7e-19  Score=169.53  Aligned_cols=228  Identities=14%  Similarity=0.156  Sum_probs=141.5

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHH--HHcCCEEEEehhhhcccccccccccccCCCCC
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLC--SKYNILMIADEIQSGLARSGRMLASDWEEVRP  122 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~--~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~  122 (306)
                      .|++.|++.+.   +++++|+++.++|++|.+ .+.+.+++|.++|  +++|++||+||+|+++......+.....+...
T Consensus       233 ~d~~~l~~~~~---~~~k~v~l~~p~NPtG~~-~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i  308 (546)
T 2zy4_A          233 YPDSELDKLKD---PAIKIFFCVNPSNPPSVK-MDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTL  308 (546)
T ss_dssp             CCHHHHGGGGS---TTEEEEEEESSCSSSCBC-CCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEE
T ss_pred             CCHHHHHHhhC---CCCeEEEEECCCCCCCcc-CCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEE
Confidence            37888887764   578888888889999955 5789999999999  88999999999999875322211111112233


Q ss_pred             cEEEeccccc-CCcccceeeEeCHH-HHhhcCC------------------------------------CCccCCCCCCH
Q 021893          123 DMVILGKALG-GGVIPVSAVLADKE-VMLCIQP------------------------------------GEHGSTFGGNP  164 (306)
Q Consensus       123 d~~s~sK~~~-~G~~~~g~~~~~~~-~~~~~~~------------------------------------~~~~~~~~~~~  164 (306)
                      .+.||||.++ +|+ |+||++++++ +++.+..                                    .....+.+.+.
T Consensus       309 ~~~S~SK~~g~~Gl-RiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~  387 (546)
T 2zy4_A          309 LVYSFSKYFGATGW-RLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLST  387 (546)
T ss_dssp             EEEESTTTTTCGGG-CEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCH
T ss_pred             EEEeCccccCCCCc-ceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCc
Confidence            4569999998 899 9999998775 6665421                                    00122234455


Q ss_pred             HHHHHHH-HHH-HHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCC-CceeeEEEeeeEEEEEEecC----CC---------
Q 021893          165 LASAVAI-ASL-DVIRD-EKLAERSAHLGEELRQHLFKIQQQFP-NYVKEVRGRGLFNAVEFDKT----AL---------  227 (306)
Q Consensus       165 ~~~~aa~-~al-~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~g~~~~i~~~~~----~~---------  227 (306)
                      +.+.++. .++ ..+.+ +.+.   ++..+.++++.+.+...+. +.....+..|.++|+.++..    ..         
T Consensus       388 ~~Q~a~a~~a~~all~~~~~~~---~~~r~~~~~r~~~l~~~L~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~  464 (546)
T 2zy4_A          388 PQQVQMALFSLFALMDEADEYK---HTLKQLIRRRETTLYRELGMPPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWAVK  464 (546)
T ss_dssp             HHHHHHHHHHHHHHHCTTCHHH---HHHHHHHHHHHHHHHGGGTSSCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhccHHHH---HHHHHHHHHHHHHHHHhcCCCcccCCCCeeEEEEEEHHHhhcccccHHHHHHhhc
Confidence            5555421 111 22222 2222   2222333333332222211 11112345677778877520    00         


Q ss_pred             h-hhHHHHHHHHHHCCceeccC-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          228 P-VSAYDICLKMKERGILAKPT-----HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       228 ~-~~~~~~~~~l~~~Gi~~~~~-----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      . .....+.+.+.++||.+.|+     +++++|+++. ..+++++++++++|+++++ ++.
T Consensus       465 ~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~-~~~  523 (546)
T 2zy4_A          465 QSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLA-NLNEYEYAAIGRALRKMAD-ELY  523 (546)
T ss_dssp             HCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESS-SSCHHHHHHHHHHHHHHHH-HHH
T ss_pred             cCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEec-cCCHHHHHHHHHHHHHHHH-HHH
Confidence            0 02234667778889999985     3578999964 3489999999999999988 654

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.81  E-value=6.9e-19  Score=160.18  Aligned_cols=219  Identities=15%  Similarity=0.114  Sum_probs=142.6

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCc
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d  123 (306)
                      .|+++|++++++.  ++++|+++++++  |...+    +++|.++|++||++||+||+|. |+.+.+..+.. ....+..
T Consensus       159 ~d~~~l~~~i~~~--~~~~v~~~~~~~--~~~~~----l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~-~~~~di~  229 (425)
T 3ecd_A          159 IDYDQVEALAQQH--KPSLIIAGFSAY--PRKLD----FARFRAIADSVGAKLMVDMAHIAGVIAAGRHANP-VEHAHVV  229 (425)
T ss_dssp             CCHHHHHHHHHHH--CCSEEEEECSCC--CSCCC----HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCG-GGTCSEE
T ss_pred             cCHHHHHHHHhhc--CCcEEEEccccC--CCcCC----HHHHHHHHHHcCCEEEEECcChHhhhhcccccCc-hhcCcEE
Confidence            3899999999853  567888875444  33445    8999999999999999999975 55444432211 1112223


Q ss_pred             EEEecccccCCcccceeeEeC-HHHHhhcCCCCccC-CCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHH
Q 021893          124 MVILGKALGGGVIPVSAVLAD-KEVMLCIQPGEHGS-TFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLF  198 (306)
Q Consensus       124 ~~s~sK~~~~G~~~~g~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~  198 (306)
                      +.|+||++ +|+ +.||++++ +++.+.+....... ....+...++++..++.....   +++.++++++.+++++.|+
T Consensus       230 ~~s~sK~l-~g~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~  307 (425)
T 3ecd_A          230 TSTTHKTL-RGP-RGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLK  307 (425)
T ss_dssp             EEESSGGG-CCC-SCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EecCCccc-CCC-CcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence            34778999 556 88999987 56666554322221 123344444444445544332   3467788888888888887


Q ss_pred             HHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----cC------CCCEEEEeCCCC----CCHH
Q 021893          199 KIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----PT------HDTIVRLTPPLS----ISSN  264 (306)
Q Consensus       199 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~------~~~~lRi~~~~~----~t~~  264 (306)
                      +.+  +  .+......+.++++.+...  ..+...+.+.|.++||.+.    |+      ..+.+|++++..    .+++
T Consensus       308 ~~g--~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e  381 (425)
T 3ecd_A          308 AGG--V--DLVTGGTDNHLLLVDLRPK--GLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAA  381 (425)
T ss_dssp             HTT--C--EEGGGSCSSSEEEEECGGG--TCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHH
T ss_pred             hCC--C--eeccCCCCceEEEEEeCCC--CCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHH
Confidence            742  1  1111124567778777641  2356778888999999998    43      235799996543    4599


Q ss_pred             HHHHHHHHHHHHHhhhc
Q 021893          265 ELQEGSKALHDVLELDL  281 (306)
Q Consensus       265 ~i~~~~~~l~~~l~~~~  281 (306)
                      ++++++++|+++++ ..
T Consensus       382 ~i~~~~~~l~~~l~-~~  397 (425)
T 3ecd_A          382 EFREVGRLILEVFE-AL  397 (425)
T ss_dssp             HHHHHHHHHHHHHH-HH
T ss_pred             HHHHHHHHHHHHHh-cc
Confidence            99999999999998 65

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.80  E-value=4.7e-19  Score=160.32  Aligned_cols=219  Identities=15%  Similarity=0.133  Sum_probs=143.2

Q ss_pred             cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc----CCEEEEehhhhcccccccccc
Q 021893           39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY----NILMIADEIQSGLARSGRMLA  114 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~----gi~li~De~~~g~~~~g~~~~  114 (306)
                      +..+|.+| ++|+++++   +++++|++++++|++|.+.+    +++|.++|++|    |+++|+||+|+++... ..+ 
T Consensus       121 v~~v~~~d-~~l~~~i~---~~t~lv~~~~~~nptG~~~~----l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~~~-  190 (393)
T 1n8p_A          121 TSFTNDLL-NDLPQLIK---ENTKLVWIETPTNPTLKVTD----IQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPL-  190 (393)
T ss_dssp             CEEESSHH-HHHHHHSC---SSEEEEEECSSCTTTCCCCC----HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGG-
T ss_pred             EEEeCCCh-HHHHHhcc---cCceEEEEECCCCCcceecC----HHHHHHHHHHhCCCCCCEEEEeCCccccccC-CHH-
Confidence            45666667 89998887   57999999999999999988    99999999999    9999999999854322 221 


Q ss_pred             cccCCCCCcEE--Eeccccc-CCcccc-eeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHH
Q 021893          115 SDWEEVRPDMV--ILGKALG-GGVIPV-SAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHL  189 (306)
Q Consensus       115 ~~~~~~~~d~~--s~sK~~~-~G~~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~  189 (306)
                        .++  .|++  |++|.++ +|+ |+ |+++++ +++++.+...........++..+.++..+++.+..  ..++..++
T Consensus       191 --~~~--~di~~~S~sK~~g~~G~-rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~~~~--~~~~~~~~  263 (393)
T 1n8p_A          191 --NFG--ADIVVHSATKYINGHSD-VVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKTLHL--RVRQAALS  263 (393)
T ss_dssp             --GGT--CSEEEEETTTTTTCSSC-CCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHHH--HHHHHHHH
T ss_pred             --HcC--CeEEEEECcccccCCCC-ceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccchHHH--HHHHHHHH
Confidence              123  4554  8889999 587 88 888885 78877765432222233456666655556654322  23444455


Q ss_pred             HHHHHHHHHHHHh---h--CCCce---------eeEEE-e-eeEEEEEEecCCChhhHHHHHHHHHHCCceec-------
Q 021893          190 GEELRQHLFKIQQ---Q--FPNYV---------KEVRG-R-GLFNAVEFDKTALPVSAYDICLKMKERGILAK-------  246 (306)
Q Consensus       190 ~~~l~~~L~~~~~---~--~~~~~---------~~~~~-~-g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~-------  246 (306)
                      .+.+.+.|++...   .  +|...         ...++ . |.++++.++..  ..+...+...|...++.++       
T Consensus       264 ~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~--~~~~~~~l~~l~~~~~~~s~G~~~s~  341 (393)
T 1n8p_A          264 ANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGG--AEAASKFASSTRLFTLAESLGGIESL  341 (393)
T ss_dssp             HHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSC--HHHHHHHHHHCSSSEECSCCCCSSCE
T ss_pred             HHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCc--HHHHHHHHhhCCcceECCCCCCCcce
Confidence            5555555544311   0  11000         00012 4 77889888641  2355666666644333321       


Q ss_pred             ---c---C--------------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          247 ---P---T--------------HDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       247 ---~---~--------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                         |   .              ..+.||++++..+++++++.+.++|+++
T Consensus       342 ~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~  391 (393)
T 1n8p_A          342 LEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA  391 (393)
T ss_dssp             EECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred             eeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence               1   1              1479999999999999999999888765

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=99.80  E-value=7.3e-19  Score=159.77  Aligned_cols=221  Identities=12%  Similarity=0.092  Sum_probs=145.9

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc---ccc----ccC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM---LAS----DWE  118 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~---~~~----~~~  118 (306)
                      |++.+.+.++..+++++++++++++|+||. .++++.+++|.++|+++++++|+||+|.+|.+.+..   +..    +..
T Consensus       176 d~~~~~~~l~~~~~~~~vll~~~p~NPtG~-~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~  254 (420)
T 4h51_A          176 NFEGMKKDILAAPDGSVFILHQCAHNPTGV-DPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRG  254 (420)
T ss_dssp             CHHHHHHHHHHSCSSCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTT
T ss_pred             CHHHHHHHHhccCCCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhC
Confidence            688888888877778899999999999995 568999999999999999999999999988544321   111    111


Q ss_pred             CCCCcEEEeccccc-CCcccceeeEeCHHHHhh-------cCCCCccCCCCCCHHHHHHHHHHHHHH------hh--ccH
Q 021893          119 EVRPDMVILGKALG-GGVIPVSAVLADKEVMLC-------IQPGEHGSTFGGNPLASAVAIASLDVI------RD--EKL  182 (306)
Q Consensus       119 ~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~aa~~al~~~------~~--~~~  182 (306)
                      .....+.||||.++ .|+ |+||+++..+..+.       +.........+.+..++.++...+..-      ..  +..
T Consensus       255 ~~~i~~~s~SK~~~~~G~-RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m  333 (420)
T 4h51_A          255 IEVLLAQSFSKNMGLYSE-RAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAM  333 (420)
T ss_dssp             CCCEEEEECTTTSCCGGG-CEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred             ceEEEEeccccccccccC-ceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            11223449999999 899 99999875432222       211112233344555555555444321      11  234


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCC
Q 021893          183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSIS  262 (306)
Q Consensus       183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t  262 (306)
                      .++++++++.+.+.|++.+... .+....+..|++.++.+.        .+.++.|.++||++.+++    ||++. ..+
T Consensus       334 ~~r~~~~R~~l~~~L~~~g~~~-~~~~i~~q~GmF~~~gls--------~e~v~~L~e~~Vy~~~~g----Ris~A-gl~  399 (420)
T 4h51_A          334 AERIRTMRRTVYDELLRLQTPG-SWEHVINQIGMFSFLGLS--------KAQCEYCQNHNIFITVSG----RANMA-GLT  399 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCSS-CCTHHHHCCSSEEECCCC--------HHHHHHHHHTTEECCTTC----EEEGG-GCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCC-CCCeecCCCceEEecCcC--------HHHHHHHHhCCEEEcCCC----EEEec-cCC
Confidence            5566666777777776654221 122234556777665433        234577889999998864    88853 468


Q ss_pred             HHHHHHHHHHHHHHHhhhcCC
Q 021893          263 SNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       263 ~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      +++|++++++|.++++ ++.+
T Consensus       400 ~~ni~~~a~aI~~vvr-~i~r  419 (420)
T 4h51_A          400 HETALMLAQTINDAVR-NVNR  419 (420)
T ss_dssp             HHHHHHHHHHHHHHHC-----
T ss_pred             HHHHHHHHHHHHHHHH-Hhhc
Confidence            9999999999999999 7664

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=99.80  E-value=3.6e-19  Score=158.29  Aligned_cols=214  Identities=11%  Similarity=0.061  Sum_probs=138.3

Q ss_pred             CHHHHHHHHHhc----CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcc--cccccccccccCC
Q 021893           46 DITALEKIFKES----GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGL--ARSGRMLASDWEE  119 (306)
Q Consensus        46 d~~~le~~i~~~----~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~--~~~g~~~~~~~~~  119 (306)
                      |+++|++.++++    +.++++|+++++ +++|.+. +.+.+++|.++|++||+++|+||+|.+|  +..+..  .....
T Consensus       127 d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~--~~~~~  202 (359)
T 1svv_A          127 RVADIESALHENRSEHMVIPKLVYISNT-TEVGTQY-TKQELEDISASCKEHGLYLFLDGARLASALSSPVND--LTLAD  202 (359)
T ss_dssp             CHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCC-CHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCC--CCHHH
T ss_pred             cHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceec-CHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcc--hhhhh
Confidence            699999999863    124889988887 5788654 6899999999999999999999999654  222211  11101


Q ss_pred             --CCCcEEE--ecccccCCcccceeeEeCHHHHhhcCCCC--ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893          120 --VRPDMVI--LGKALGGGVIPVSAVLADKEVMLCIQPGE--HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL  193 (306)
Q Consensus       120 --~~~d~~s--~sK~~~~G~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l  193 (306)
                        ..+|+++  .+|. ++.. ++|+++.++++++.+....  ....+..+.....+..+.++...-++..++++++++++
T Consensus       203 ~~~~~d~~~~s~~K~-g~~~-~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l  280 (359)
T 1svv_A          203 IARLTDMFYIGATKA-GGMF-GEALIILNDALKPNARHLIKQRGALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAIL  280 (359)
T ss_dssp             HHHHCSEEEEECTTT-TCSS-CEEEEECSGGGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHH
T ss_pred             hhhcCCEEEEecccC-CCCC-ceEEEEEcccHHHHHHHHHhcCCcccccchhhHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence              1346654  5675 4344 6788988988877665321  12222222222222222222111134567778888888


Q ss_pred             HHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-Cceecc---CCCCEEEEeCCCCCCHHHHHHH
Q 021893          194 RQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKP---THDTIVRLTPPLSISSNELQEG  269 (306)
Q Consensus       194 ~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~---~~~~~lRi~~~~~~t~~~i~~~  269 (306)
                      ++.| +.. .   .....+..+.++++.++        .++++.|+++ ||.+.+   ...+++|++++..+++++++++
T Consensus       281 ~~~L-~~~-~---~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~  347 (359)
T 1svv_A          281 KAGL-EAC-G---IRLAWPSASNQLFPILE--------NTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKECHRF  347 (359)
T ss_dssp             HHHH-HHT-T---CCBSSCCSSSEECBEEE--------HHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHHHHH
T ss_pred             HHHh-ccC-C---eEEccCCccceEEEEcC--------HHHHHHHHHhcCEEEEecccCCCceEEEEccCcCCHHHHHHH
Confidence            8888 431 1   22222334555555543        3788999999 999854   2467999998888999999999


Q ss_pred             HHHHHHHHh
Q 021893          270 SKALHDVLE  278 (306)
Q Consensus       270 ~~~l~~~l~  278 (306)
                      +++|+++++
T Consensus       348 ~~~l~~~~~  356 (359)
T 1svv_A          348 VEVLKRLVA  356 (359)
T ss_dssp             HHHHHHC--
T ss_pred             HHHHHHHHh
Confidence            999998876

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=99.79  E-value=1.8e-18  Score=153.64  Aligned_cols=211  Identities=13%  Similarity=0.093  Sum_probs=137.2

Q ss_pred             CHHHHHH-HHHhc----CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc--ccccccccccC
Q 021893           46 DITALEK-IFKES----GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA--RSGRMLASDWE  118 (306)
Q Consensus        46 d~~~le~-~i~~~----~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~--~~g~~~~~~~~  118 (306)
                      |+++|++ +++++    ++++++|+++++++ +|. +++.+.+++|.++|++||++||+|++|..+.  ..|..  ....
T Consensus       122 d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~  197 (356)
T 1v72_A          122 DIVRLRERTREKVGDVHTTQPACVSITQATE-VGS-IYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCS--PAEM  197 (356)
T ss_dssp             CHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSC-CCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCC--TTTT
T ss_pred             cHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCc-cCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCC--HHHh
Confidence            8999999 88741    23689999999764 885 5689999999999999999999999997431  12221  1111


Q ss_pred             C--CCCcEE--EecccccCCcccce--eeEeCHHHHhhcCCCC-ccCCCCCCHHHHHHHHHHHHHHhhc---cHHHHHHH
Q 021893          119 E--VRPDMV--ILGKALGGGVIPVS--AVLADKEVMLCIQPGE-HGSTFGGNPLASAVAIASLDVIRDE---KLAERSAH  188 (306)
Q Consensus       119 ~--~~~d~~--s~sK~~~~G~~~~g--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~aa~~al~~~~~~---~~~~~~~~  188 (306)
                      +  ...|++  ++||.   |. |+|  ++++++++++.+.... ..+.....  +..++..+++.+.++   +..++.++
T Consensus       198 ~~~~~~d~~~~s~sK~---g~-~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~  271 (356)
T 1v72_A          198 TWKAGVDALSFGATKN---GV-LAAEAIVLFNTSLATEMSYRRKRAGHLSSK--MRFLSAQIDAYLTDDLWLRNARKANA  271 (356)
T ss_dssp             TGGGTCCEEEECCGGG---TC-SSCEEEEESSGGGHHHHHHHHHHTTCCCSS--THHHHHHHHHHTSTTHHHHHHHHHHH
T ss_pred             hhhhcCCEEEEecccC---CC-cCccEEEEECHHHHhhHHHHhhccCchhhh--HHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            1  134544  67787   33 555  7878888877654321 11211111  122223334444332   23445556


Q ss_pred             HHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHH
Q 021893          189 LGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNEL  266 (306)
Q Consensus       189 ~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i  266 (306)
                      +.+++++.|+++    ++.....+..+.++++.++        .++++.|.++||.+.++.  .+++|++++..++++++
T Consensus       272 ~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~--------~~~~~~l~~~gi~v~~g~~~~~~iRi~~~~~~~~~~i  339 (356)
T 1v72_A          272 AAQRLAQGLEGL----GGVEVLGGTEANILFCRLD--------SAMIDALLKAGFGFYHDRWGPNVVRFVTSFATTAEDV  339 (356)
T ss_dssp             HHHHHHHHHTTC----TTEEEESCCCSSEEEEEEC--------HHHHHHHHHTTCBCBCSSSSTTEEEEECCTTCCHHHH
T ss_pred             HHHHHHHHHhhC----CCcEEccCCCccEEEEEcC--------HHHHHHHHhcCeEEeccccCCCeEEEEecCCCCHHHH
Confidence            666666666542    2222222345666776654        268899999999998653  68999999889999999


Q ss_pred             HHHHHHHHHHHh
Q 021893          267 QEGSKALHDVLE  278 (306)
Q Consensus       267 ~~~~~~l~~~l~  278 (306)
                      ++++++|+++++
T Consensus       340 ~~~~~~l~~~l~  351 (356)
T 1v72_A          340 DHLLNQVRLAAD  351 (356)
T ss_dssp             HHHHHHHHHTC-
T ss_pred             HHHHHHHHHHHH
Confidence            999999998877

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=99.79  E-value=5.9e-19  Score=164.36  Aligned_cols=221  Identities=10%  Similarity=0.070  Sum_probs=151.4

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccc-----c--c--ccccc
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARS-----G--R--MLASD  116 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~-----g--~--~~~~~  116 (306)
                      |+++|+++++   +++++|+++++++++|.+.+    +++|.++|++||++||+|++|+++...     |  .  .+...
T Consensus       195 d~~~l~~~i~---~~~~~v~~~~p~nptG~~~~----l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~  267 (497)
T 3mc6_A          195 DLGKVKKFIN---KNTVLLVGSAPNFPHGIADD----IEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFR  267 (497)
T ss_dssp             CTTTTGGGCC---SSEEEEEEETTCTTTCCCCS----CTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTT
T ss_pred             CHHHHHHHHh---hCCEEEEEECCCCCCCcCCC----HHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCcccccc
Confidence            6788888887   47899999999999998877    999999999999999999999865332     1  1  12223


Q ss_pred             cCCCCCcEE--EecccccCCcccceeeEeCHHHHhhcCCC----CccC-----CC--CCCHHHHHHHHHHHHHHhhc---
Q 021893          117 WEEVRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPG----EHGS-----TF--GGNPLASAVAIASLDVIRDE---  180 (306)
Q Consensus       117 ~~~~~~d~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~----~~~~-----~~--~~~~~~~~aa~~al~~~~~~---  180 (306)
                      ..+  .|++  +++|.+.++. ++|+++++++.+......    ....     ++  +.+....+++.++++.+..+   
T Consensus       268 ~~g--~d~~~~s~~K~l~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~  344 (497)
T 3mc6_A          268 VPG--VTSISCDTHKYGFAPK-GSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYI  344 (497)
T ss_dssp             STT--CCEEEEETTTTTCCCS-SCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC--CcEEEECchhhcCCCC-CceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHH
Confidence            334  3555  5569888888 999999877665543211    0111     11  11223344555666665543   


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-CCEEEEeCCC
Q 021893          181 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-DTIVRLTPPL  259 (306)
Q Consensus       181 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~~~lRi~~~~  259 (306)
                      +..++..++.+++++.|++.   .++.....+..+.++.+...    ..+..++.+.|.++||.+.... +..+|++++ 
T Consensus       345 ~~~~~~~~~~~~l~~~L~~~---~~g~~~~~~~~~~~v~~~~~----~~~~~~l~~~L~~~Gi~v~~~~~~~~~ri~~~-  416 (497)
T 3mc6_A          345 ESCQEIVGAAMKFKKYIQEN---IPDLDIMGNPRYSVISFSSK----TLNIHELSDRLSKKGWHFNALQKPVALHMAFT-  416 (497)
T ss_dssp             HHHHHHHHHHHHHHHHHHHS---CTTCEECSCCCSSEEEEECT----TTTHHHHHHHHHTTTCBCEECCSSCCEEEECC-
T ss_pred             HHHHHHHHHHHHHHHHHHhc---CCCEEEecCCCeeEEEEeCC----CCCHHHHHHHHHhCCEEEecCCCCCeEEEEEe-
Confidence            34566777777777777773   11222222244555555433    3467899999999999887653 457899988 


Q ss_pred             CCCHHHHHHHHHHHHHHHhhhcCCCC
Q 021893          260 SISSNELQEGSKALHDVLELDLPKMR  285 (306)
Q Consensus       260 ~~t~~~i~~~~~~l~~~l~~~~~~~~  285 (306)
                      .++++++++++++|+++++ ++.+.+
T Consensus       417 ~~t~e~i~~~~~~L~~~l~-~~~~~~  441 (497)
T 3mc6_A          417 RLSAHVVDEICDILRTTVQ-ELKSES  441 (497)
T ss_dssp             TTTTCTHHHHHHHHHHHHH-HHTCC-
T ss_pred             CCCHHHHHHHHHHHHHHHH-HHHhCc
Confidence            7799999999999999999 876543

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=99.79  E-value=1.4e-18  Score=158.79  Aligned_cols=218  Identities=14%  Similarity=0.110  Sum_probs=148.7

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcC----------CEEEEehhhhcccccccccc
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN----------ILMIADEIQSGLARSGRMLA  114 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~g----------i~li~De~~~g~~~~g~~~~  114 (306)
                      .|+++|+++++   +++++|++++++|++|.+.+    +++|.++|+++|          +++|+||+|+. +..  .+.
T Consensus       163 ~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~-~~~--~~~  232 (432)
T 3a9z_A          163 VEVEDILAAVR---PTTCLVTIMLANNETGVIMP----ISEISRRIKALNQIRAASGLPRVLVHTDAAQAL-GKR--RVD  232 (432)
T ss_dssp             CCHHHHHHTCC---TTEEEEECCSBCTTTCBBCC----HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTT-TTS--CCC
T ss_pred             cCHHHHHHhcc---CCceEEEEECcccCcccccC----HHHHHHHHHhcCcccccccCCceEEEEEchhhh-CCc--ccC
Confidence            37899998887   47999999999999999988    899999999999          99999999963 221  111


Q ss_pred             cccCCCCCcEE--EecccccCCcccceeeEeCHHH-HhhcCCCC-------ccCCCCCCHHHHHHHHHHHHHHhh--ccH
Q 021893          115 SDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEV-MLCIQPGE-------HGSTFGGNPLASAVAIASLDVIRD--EKL  182 (306)
Q Consensus       115 ~~~~~~~~d~~--s~sK~~~~G~~~~g~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~~~aa~~al~~~~~--~~~  182 (306)
                      ...  ..+|++  |++|.+  |. ++||+++++++ ...+.+..       ....++.+..++.++.++++.+.+  ++.
T Consensus       233 ~~~--~~~d~~~~s~~K~~--g~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~  307 (432)
T 3a9z_A          233 VED--LGVDFLTIVGHKFY--GP-RIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETY  307 (432)
T ss_dssp             HHH--HCCSEEEEEGGGTT--CC-SCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhh--cCCCEEEEehhHhc--CC-cceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHH
Confidence            111  235554  668976  46 79999998775 34444321       122345677888888788887654  456


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCcee-e----EEEeeeEEEEEEecCCChhhHHHHHHHHH----HCCceecc------
Q 021893          183 AERSAHLGEELRQHLFKIQQQFPNYVK-E----VRGRGLFNAVEFDKTALPVSAYDICLKMK----ERGILAKP------  247 (306)
Q Consensus       183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~-~----~~~~g~~~~i~~~~~~~~~~~~~~~~~l~----~~Gi~~~~------  247 (306)
                      .++++++++++.+.|+++...  .... .    ....+.+.++.+...  ..+..++.+.+.    +.|+.+.+      
T Consensus       308 ~~~~~~~~~~l~~~L~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~i~~~~G~~~~~~~~~~~  383 (432)
T 3a9z_A          308 EAHMRDIRDYLEERLEAEFGK--RIHLNSRFPGVERLPNTCNFSIQGS--QLRGYMVLAQCQTLLASVGASCHSDHEDRP  383 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGG--GEEESSCCTTCCBCTTEEEEEECST--TCCHHHHHHHCSSEECBSSCGGGGGGTTSC
T ss_pred             HHHHHHHHHHHHHHHHhccCC--cEEEeCCCCcccCCCCEEEEEeCCC--CCcHHHHHHHhcCeEEeccccccCCCCCCc
Confidence            788888889999998885321  0110 0    123445666766641  123445555442    22333322      


Q ss_pred             -------C-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          248 -------T-----HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       248 -------~-----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                             +     ..+++|++++..++++|+++++++|+++++ ++.
T Consensus       384 ~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~-~~~  429 (432)
T 3a9z_A          384 SPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVN-QLE  429 (432)
T ss_dssp             CHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHH-HHH
T ss_pred             cHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHH-Hhc
Confidence                   1     137999999988899999999999999988 654

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.79  E-value=7.2e-19  Score=159.56  Aligned_cols=247  Identities=15%  Similarity=0.115  Sum_probs=155.8

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+||+....|++.+........         .....+..++.+|++++++.++   +++++|++++++|++|.+.+   
T Consensus       105 gd~Vl~~~~~y~~~~~~~~~~~~---------~~G~~v~~v~~~d~~~l~~~i~---~~t~~v~~~~p~nptG~~~~---  169 (403)
T 3cog_A          105 GDQIICMDDVYGGTNRYFRQVAS---------EFGLKISFVDCSKIKLLEAAIT---PETKLVWIETPTNPTQKVID---  169 (403)
T ss_dssp             TCEEEEESSCCHHHHHHHHHTGG---------GGTCEEEEECTTSHHHHHHHCC---TTEEEEEEESSCTTTCCCCC---
T ss_pred             CCEEEEeCCCcchHHHHHHHHHH---------HcCCEEEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCeeeC---
Confidence            35677777777764432111100         0112245667779999999987   57999999999999999988   


Q ss_pred             HHHHHHHHHHHcC-CEEEEehhhhcccccccccccccCCCCCcEE--EecccccC--CcccceeeEeC-HHHHhhcCCCC
Q 021893           82 YLKAVRDLCSKYN-ILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGG--GVIPVSAVLAD-KEVMLCIQPGE  155 (306)
Q Consensus        82 ~l~~i~~l~~~~g-i~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~--G~~~~g~~~~~-~~~~~~~~~~~  155 (306)
                       +++|.++|+++| +++|+||+|+++.. ...+     ....|++  |++|.++|  |. ++|+++++ +++++.+....
T Consensus       170 -l~~i~~la~~~g~~~livD~~~~~~~~-~~~~-----~~~~div~~S~sK~~~g~~~~-~~G~v~~~~~~l~~~l~~~~  241 (403)
T 3cog_A          170 -IEGCAHIVHKHGDIILVVDNTFMSPYF-QRPL-----ALGADISMYSATKYMNGHSDV-VMGLVSVNCESLHNRLRFLQ  241 (403)
T ss_dssp             -HHHHHHHHTSSSCCEEEEECTTTCTTT-CCTT-----TTTCSEEEEETTTTTTCSSCC-CCEEEEECCHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHcCCCEEEEECCCccccc-CCcc-----ccCCeEEEEcChhhccCCCCC-eEEEEEECcHHHHHHHHHHH
Confidence             999999999999 99999999985421 1111     2345655  88999983  45 78999984 78877776433


Q ss_pred             ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH----------hhCCCcee---eEEEeeeEEEEEE
Q 021893          156 HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQ----------QQFPNYVK---EVRGRGLFNAVEF  222 (306)
Q Consensus       156 ~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~----------~~~~~~~~---~~~~~g~~~~i~~  222 (306)
                      ...+...+++.+.++..+++.+..  ..++..++...+.+.+++..          ...|+...   ..++.|.++.+.+
T Consensus       242 ~~~g~~~~~~~~~~~~~~l~~l~~--r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l  319 (403)
T 3cog_A          242 NSLGAVPSPIDCYLCNRGLKTLHV--RMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYI  319 (403)
T ss_dssp             HHHCCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEE
T ss_pred             HhcCCCCCHHHHHHHHhhhhHHHH--HHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEe
Confidence            333445677777777777765422  23334444444555554430          00110100   1124577778777


Q ss_pred             ecCCChhhHHHHHHHHHHCCceecc---C---------------------------CCCEEEEeCCCCCCHHHHHHHHHH
Q 021893          223 DKTALPVSAYDICLKMKERGILAKP---T---------------------------HDTIVRLTPPLSISSNELQEGSKA  272 (306)
Q Consensus       223 ~~~~~~~~~~~~~~~l~~~Gi~~~~---~---------------------------~~~~lRi~~~~~~t~~~i~~~~~~  272 (306)
                      ..   .  ..+..+.+.+.|+.+..   +                           .++++|++++...++++|+.+.+.
T Consensus       320 ~~---~--~~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~a  394 (403)
T 3cog_A          320 KG---T--LQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQA  394 (403)
T ss_dssp             SS---C--HHHHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHH
T ss_pred             cC---C--HHHHHHHHHhCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHH
Confidence            53   1  23455666667774321   1                           157999999887777777766666


Q ss_pred             HHHHHh
Q 021893          273 LHDVLE  278 (306)
Q Consensus       273 l~~~l~  278 (306)
                      |+++++
T Consensus       395 l~~~~~  400 (403)
T 3cog_A          395 LKAAHP  400 (403)
T ss_dssp             HHHHCC
T ss_pred             HHHhhc
Confidence            665543

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=99.79  E-value=7.7e-19  Score=158.69  Aligned_cols=208  Identities=13%  Similarity=0.093  Sum_probs=127.4

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |+++|+++++   +++++|++++++|++|.+.+    +++|.++|++||+++|+||+|+. +..  .  .+.... +|++
T Consensus       148 d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~--~--~~~~~~-~d~~  214 (400)
T 3vax_A          148 SVEGVMERLR---PDTLLVSLMHVNNETGVIQP----VAELAQQLRATPTYLHVDAAQGY-GKV--P--GDLTTP-IDMI  214 (400)
T ss_dssp             CHHHHHTTCC---TTEEEEECCSBCTTTCBBCC----HHHHHHHHTTSSCEEEEECTTTT-TTS--G--GGGGSC-CSEE
T ss_pred             CHHHHHHhcC---CCceEEEEECCCCCceeeCc----HHHHHHHHHhcCCEEEEEhhhhc-CCC--C--cChhhc-CcEE
Confidence            8999999887   57999999999999999888    99999999999999999999972 111  1  122223 5655


Q ss_pred             --EecccccCCcccceeeE-eCHH-HH---hhcCCCC-------ccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHH
Q 021893          126 --ILGKALGGGVIPVSAVL-ADKE-VM---LCIQPGE-------HGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHL  189 (306)
Q Consensus       126 --s~sK~~~~G~~~~g~~~-~~~~-~~---~~~~~~~-------~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~  189 (306)
                        |++|. .|+. ++|+++ ++++ +.   ..+.+..       .....+.+..++.++.++++.+.+  ++..++++++
T Consensus       215 ~~s~~K~-~g~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~  292 (400)
T 3vax_A          215 SISGHKI-GAPK-GVGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDL  292 (400)
T ss_dssp             EEETGGG-TSCS-SCEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred             EEeHHHh-CCCC-ceEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence              66694 4444 678777 7652 21   1222221       112334567777777788877654  4566777777


Q ss_pred             HHHHHHHHHHHHhhCCCceeeEEE---eeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----------------
Q 021893          190 GEELRQHLFKIQQQFPNYVKEVRG---RGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----------------  249 (306)
Q Consensus       190 ~~~l~~~L~~~~~~~~~~~~~~~~---~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----------------  249 (306)
                      ++++.+.|+ .    ++.....+.   .+.++++.++    ..+..++.+.|. +||.+.++.                 
T Consensus       293 ~~~l~~~L~-~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g  362 (400)
T 3vax_A          293 RSRLLAGLA-S----TSFQVNGDQDHVVPHILNLSFE----DVDAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMG  362 (400)
T ss_dssp             HHHHHHHHT-T----TTCEECSCTTSBCTTEEEEECT----TCCHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTT
T ss_pred             HHHHHHhhC-C----CCEEEeCCcccCCCCEEEEEeC----CCCHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcC
Confidence            777777776 2    112211111   2345666554    245778999999 999888742                 


Q ss_pred             ------CCEEEEeC-CCCCCHHHHHHHHHHHHHHHh
Q 021893          250 ------DTIVRLTP-PLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       250 ------~~~lRi~~-~~~~t~~~i~~~~~~l~~~l~  278 (306)
                            .+++|+++ +..++++++++++++|+++++
T Consensus       363 ~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~  398 (400)
T 3vax_A          363 LPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKP  398 (400)
T ss_dssp             CCHHHHTSEEEEEEEEC-------------------
T ss_pred             CCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhc
Confidence                  48999998 888899999999999998876

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=99.79  E-value=8.1e-19  Score=156.16  Aligned_cols=206  Identities=10%  Similarity=0.070  Sum_probs=149.0

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc-CCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY-NILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~-gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |+++|+  ++   +++++|++++++|++|.+.+    +++|.++|++| |+++|+|++|+...   ...  +...  .|+
T Consensus       121 d~~~l~--~~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~p~~~li~D~a~~~~~---~~~--~~~~--~d~  184 (362)
T 3ffr_A          121 YPADIT--VP---ADAEIICLTHNETSSGVSMP----VEDINTFRDKNKDALIFVDAVSSLPY---PKF--DWTK--IDS  184 (362)
T ss_dssp             CGGGCC--CC---TTCCEEEEESEETTTTEECC----HHHHTTSGGGSTTSEEEEECTTTTTS---SCC--CTTS--CSE
T ss_pred             CHHHHh--cc---CCccEEEEEcCCCCcceeCC----HHHHHHHHHhCCCCEEEEecccccCC---ccc--ChhH--CcE
Confidence            677777  32   67899999999999999888    99999999999 99999999997321   111  1111  455


Q ss_pred             E--EecccccCCcccceeeEeCHHHHhhcCCCCc---------------------cCCCCCCHHHHHHHHHHHHHHhh--
Q 021893          125 V--ILGKALGGGVIPVSAVLADKEVMLCIQPGEH---------------------GSTFGGNPLASAVAIASLDVIRD--  179 (306)
Q Consensus       125 ~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~aa~~al~~~~~--  179 (306)
                      +  +++|.++++. ++|++++++++++.+.+...                     ...++.+..++.++.++++.+..  
T Consensus       185 ~~~s~~K~~~~~~-G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~  263 (362)
T 3ffr_A          185 VFFSVQKCFGLPA-GLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQIS  263 (362)
T ss_dssp             EEEETTSTTCCCS-CCEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHC
T ss_pred             EEEecccccCCCC-ceEEEEECHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHcc
Confidence            4  6679999665 77888899988776543211                     11345677777777788887654  


Q ss_pred             -ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE----EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----CC
Q 021893          180 -EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV----RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----HD  250 (306)
Q Consensus       180 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~  250 (306)
                       ++..++.+++.+++++.|+++    ++.....    ...+.++++.++.     +..++.+.|.++||.+.++    .+
T Consensus       264 ~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~~~~g~~~~~~  334 (362)
T 3ffr_A          264 ADGIRKQTEEKAALINTYIESS----KVFSFGVEDAKLRSMTTIVANTTM-----LPGEINKILEPFDMAVGAGYGSKKE  334 (362)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHC----SSEEESSSCGGGBCSSEEEEEESS-----CHHHHHHHHGGGTEEEEECSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHc----cCceeccCChhhcCCceEEEecCC-----CHHHHHHHHHHCCeEEecCccccCC
Confidence             345666777777777777664    1111111    1245666776652     5778999999999999864    46


Q ss_pred             CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          251 TIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       251 ~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      +++|++++..++++++++++++|++++
T Consensus       335 ~~iRis~~~~~~~e~i~~l~~~l~~~~  361 (362)
T 3ffr_A          335 TQIRIANFPAHSLEQVHKLVQTLKEKI  361 (362)
T ss_dssp             TEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence            899999998899999999999998764

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=99.79  E-value=3.6e-18  Score=157.27  Aligned_cols=230  Identities=15%  Similarity=0.079  Sum_probs=145.2

Q ss_pred             CHHHHHHHHHhcC-CcEEEEEEccccC-CCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc----------cccccccc
Q 021893           46 DITALEKIFKESG-DQIAGFLFEPIQG-EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG----------LARSGRML  113 (306)
Q Consensus        46 d~~~le~~i~~~~-~~~~~v~v~~~~~-~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g----------~~~~g~~~  113 (306)
                      |+++|+++++++. +++++|++++++| ++|. +.+.+.+++|.++|++||++||+||+|+.          +.+.|..+
T Consensus       159 d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~-~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~  237 (456)
T 2ez2_A          159 DLKKLQKLIDEKGAENIAYICLAVTVNLAGGQ-PVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSI  237 (456)
T ss_dssp             CHHHHHHHHHHHCGGGEEEEEEESSBTTTTSB-CCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCH
T ss_pred             CHHHHHHHHHhccccceeEEEEeccCCCCCCc-cCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcch
Confidence            8999999998642 3358888886666 7884 56899999999999999999999999984          33444322


Q ss_pred             c-c-ccCCCCCcEEEec-ccccCCcccceeeEe-CHHHHhhcCCCCc----cCCCC-CCHHHHHH-HHHHHHHHhhccHH
Q 021893          114 A-S-DWEEVRPDMVILG-KALGGGVIPVSAVLA-DKEVMLCIQPGEH----GSTFG-GNPLASAV-AIASLDVIRDEKLA  183 (306)
Q Consensus       114 ~-~-~~~~~~~d~~s~s-K~~~~G~~~~g~~~~-~~~~~~~~~~~~~----~~~~~-~~~~~~~a-a~~al~~~~~~~~~  183 (306)
                      . + +..+..+|++++| |.+++.- +.||+++ ++++++.+.....    ..++. .+...+.+ +.+.++.+. +++.
T Consensus       238 ~~~~~~~~~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~-~~~~  315 (456)
T 2ez2_A          238 AEIVHEMFSYADGCTMSGKKDCLVN-IGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ-YEYI  315 (456)
T ss_dssp             HHHHHHHHTTCSEEEEETTTTTCCS-SCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC-HHHH
T ss_pred             hhhhhhhcccCCEEEEeCcccCCCC-ceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH-HHHH
Confidence            1 0 0112235766554 5454322 5788988 6787766543211    11111 23333333 344443332 3456


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec--C--CChhh-HHHHHHHH-HHCCceeccC---------
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK--T--ALPVS-AYDICLKM-KERGILAKPT---------  248 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~--~--~~~~~-~~~~~~~l-~~~Gi~~~~~---------  248 (306)
                      ++.+++.+++++.|++.  .+   ....+..+.++++.+..  .  ..... ...+++.| .++||.+.+.         
T Consensus       316 ~~~~~~~~~l~~~L~~~--g~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~  390 (456)
T 2ez2_A          316 EHRVKQVRYLGDKLKAA--GV---PIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNN  390 (456)
T ss_dssp             HHHHHHHHHHHHHHHHT--TC---CBCSSCCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCT
T ss_pred             HHHHHHHHHHHHHHhcC--CC---ccccCCCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCc
Confidence            67777778888888774  12   11123456777777631  1  10111 34457777 5779875431         


Q ss_pred             --------CCCEEEEeCCCC-CCHHHHHHHHHHHHHHHhhhcCCC
Q 021893          249 --------HDTIVRLTPPLS-ISSNELQEGSKALHDVLELDLPKM  284 (306)
Q Consensus       249 --------~~~~lRi~~~~~-~t~~~i~~~~~~l~~~l~~~~~~~  284 (306)
                              ..+++|++++.. ++++++++++++|+++++ +..+.
T Consensus       391 ~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~-~~~~~  434 (456)
T 2ez2_A          391 VTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQ-HKEDI  434 (456)
T ss_dssp             TTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHH-TGGGC
T ss_pred             cccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHh-hhhhc
Confidence                    137899998876 899999999999999998 75543

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.78  E-value=1.5e-18  Score=156.75  Aligned_cols=241  Identities=12%  Similarity=0.100  Sum_probs=152.6

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhH
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGY   82 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~   82 (306)
                      .+||+...+||+.........      .   .....+..++..|++++++.++   +++++|++++++|++|.+.+    
T Consensus        99 d~vl~~~~~y~~~~~~~~~~~------~---~~g~~~~~v~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~----  162 (389)
T 3acz_A           99 DHLIAGDTLYGCTVSLFTHWL------P---RFGIEVDLIDTSDVEKVKAAWK---PNTKMVYLESPANPTCKVSD----  162 (389)
T ss_dssp             CEEEEESSCCHHHHHHHHHHH------H---HTTCEEEEECTTCHHHHHHTCC---TTEEEEEEESSCTTTCCCCC----
T ss_pred             CEEEEeCCCchHHHHHHHHHH------H---HcCCEEEEECCCCHHHHHHhcC---CCCeEEEEECCCCCCCeecC----
Confidence            567777777776443221100      0   0011235566679999999887   57999999999999999988    


Q ss_pred             HHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--Eeccccc-CCcccc-eeeEeCH-HHHhhcCCCCcc
Q 021893           83 LKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALG-GGVIPV-SAVLADK-EVMLCIQPGEHG  157 (306)
Q Consensus        83 l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~-~G~~~~-g~~~~~~-~~~~~~~~~~~~  157 (306)
                      +++|.++|++||+++|+||+|+++. .+..+     +..+|++  |++|+++ +|. |+ |++++++ ++++.++.....
T Consensus       163 l~~i~~~~~~~~~~livD~~~~~~~-~~~~~-----~~~~di~~~S~sK~~~~~~~-~~~G~v~~~~~~~~~~l~~~~~~  235 (389)
T 3acz_A          163 IKGIAVVCHERGARLVVDATFTSPC-FLKPL-----ELGADIALHSVSKYINGHGD-VIGGVSSAKTAEDIATIKFYRKD  235 (389)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTTCTT-TCCGG-----GTTCSEEEEETTTTTTCSSC-CCCEEEEESSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCEEEEECCCcccc-ccCcc-----ccCCeEEEECChhhccCCCC-ceeEEEEECcHHHHHHHHHHHHh
Confidence            9999999999999999999998541 12222     2346665  8889998 466 87 9999988 888777643322


Q ss_pred             CCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----hCC------Cce---eeEEEeeeEEEEEEec
Q 021893          158 STFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFP------NYV---KEVRGRGLFNAVEFDK  224 (306)
Q Consensus       158 ~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~------~~~---~~~~~~g~~~~i~~~~  224 (306)
                      .....++..+.++..+++.+..  ..++..++.+.+.+.|++...    .++      +..   ...++.|.++.+.+..
T Consensus       236 ~g~~~~~~~~~~~~~~l~~l~~--r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~  313 (389)
T 3acz_A          236 AGSLMAPMDAFLCARGMKTLPI--RMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS  313 (389)
T ss_dssp             HCCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS
T ss_pred             cCCCCCHHHHHHHHcCccHHHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC
Confidence            2334566666666666654322  234445556666666665310    000      000   0012457778887752


Q ss_pred             CCChhhHHHHHHHHHHCCceeccC------------------------------CCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893          225 TALPVSAYDICLKMKERGILAKPT------------------------------HDTIVRLTPPLSISSNELQEGSKALH  274 (306)
Q Consensus       225 ~~~~~~~~~~~~~l~~~Gi~~~~~------------------------------~~~~lRi~~~~~~t~~~i~~~~~~l~  274 (306)
                            ..+..+.+.+.|+.+.+.                              .++.+|++++..    +++++++.|.
T Consensus       314 ------~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~----~~~~li~~l~  383 (389)
T 3acz_A          314 ------FEAAKKLMEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIE----NVDDIIADLK  383 (389)
T ss_dssp             ------HHHHHHHHTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSS----CHHHHHHHHH
T ss_pred             ------HHHHHHHHHhCCCcEECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccC----CHHHHHHHHH
Confidence                  345566666677765441                              147999997655    4556666666


Q ss_pred             HHHh
Q 021893          275 DVLE  278 (306)
Q Consensus       275 ~~l~  278 (306)
                      ++++
T Consensus       384 ~al~  387 (389)
T 3acz_A          384 QALE  387 (389)
T ss_dssp             HHHT
T ss_pred             HHHh
Confidence            6665

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.78  E-value=1.4e-18  Score=159.14  Aligned_cols=219  Identities=17%  Similarity=0.153  Sum_probs=142.8

Q ss_pred             cccccCCCHHHHHHHHHhcCCcE-EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccccc
Q 021893           39 HLKVDFGDITALEKIFKESGDQI-AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW  117 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~-~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~  117 (306)
                      +.+++.+|+++|+++|+.   ++ ++|++++++|++|.+.+    +++|.++|++||+++|+|++|+..    ..  ...
T Consensus       181 v~~v~~~d~~~l~~ai~~---~tv~lV~le~p~NptG~v~d----l~~I~~la~~~g~~livD~a~~~~----~~--~~~  247 (445)
T 1qgn_A          181 ATVIDPADVGALELALNQ---KKVNLFFTESPTNPFLRCVD----IELVSKLCHEKGALVCIDGTFATP----LN--QKA  247 (445)
T ss_dssp             EEEECSSCHHHHHHHHHH---SCEEEEEEESSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTTCT----TT--CCT
T ss_pred             EEEeCCCCHHHHHHHhcc---CCCCEEEEeCCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCccc----cc--CCc
Confidence            456677799999999984   56 99999999999999988    999999999999999999999732    11  122


Q ss_pred             CCCCCcEE--EecccccC-CcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 021893          118 EEVRPDMV--ILGKALGG-GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELR  194 (306)
Q Consensus       118 ~~~~~d~~--s~sK~~~~-G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~  194 (306)
                      ....+|++  |++|.++| |..++|++++++++++.+...........+++.+..+..+++.+..  ..++..++.+.+.
T Consensus       248 ~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~l~~--r~~~~~~~a~~l~  325 (445)
T 1qgn_A          248 LALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMA  325 (445)
T ss_dssp             TTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGGHHH--HHHHHHHHHHHHH
T ss_pred             cccCCEEEEECCcccccccccceEEEEEECHHHHHHHHHHHHHhCCCCCHHHHHHHHHhHHHHHH--HHHHHHHHHHHHH
Confidence            34456766  57899984 3226999999999888775422222223455555555555554422  1334445566666


Q ss_pred             HHHHHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------------
Q 021893          195 QHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------------  248 (306)
Q Consensus       195 ~~L~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------------  248 (306)
                      +.|++...    .+|...         ..+++.|.++++.+...  ......+.+.|...++.++.+             
T Consensus       326 ~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~--~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~  403 (445)
T 1qgn_A          326 EILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGD--LLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMS  403 (445)
T ss_dssp             HHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSC--HHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHH
T ss_pred             HHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCC--HHHHHHHHHhCCCceEeccCCCCceeeecccccc
Confidence            66665310    001000         00124688889988741  133556666665333332211             


Q ss_pred             --------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 --------------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 --------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                    .++.||++++    .+|++.+++.|+++++
T Consensus       404 h~~~~~~~~~~~g~~~~~iRlSvG----~Edid~li~~L~~al~  443 (445)
T 1qgn_A          404 YWDLSQSDRAKYGIMDNLVRFSFG----VEDFDDLKADILQALD  443 (445)
T ss_dssp             STTSCHHHHHTTTCCSSEEEEECC----SSCHHHHHHHHHHHHH
T ss_pred             cccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHh
Confidence                          2479999965    4689999999999887

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=99.78  E-value=1e-18  Score=157.01  Aligned_cols=223  Identities=13%  Similarity=0.048  Sum_probs=140.7

Q ss_pred             CCHHHHHHHHHhcCCcEEE-EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc
Q 021893           45 GDITALEKIFKESGDQIAG-FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~-v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d  123 (306)
                      .|+++|++. +   +++++ |++++++|++|.   +...+++|.++|++||+++|+||+|+.+. .+...........+|
T Consensus       129 ~d~~~l~~~-~---~~~~~~v~~~~p~nptG~---~~~~l~~i~~l~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~d  200 (374)
T 2aeu_A          129 DKVGEILNK-I---DKDTLVIITGSTMDLKVI---ELENFKKVINTAKNKEAIVFVDDASGARV-RLLFNQPPALKLGAD  200 (374)
T ss_dssp             SCHHHHHTT-C---CTTEEEEEECBCTTSCBC---CHHHHHHHHHHHHHHTCCEEEECTTHHHH-HHHTTCCCHHHHTCS
T ss_pred             CCHHHHHhc-C---CCccEEEEEccCCCCCCC---CcccHHHHHHHHHHcCCEEEEECCccccc-ccccccCCccccCCc
Confidence            589999887 3   57888 999999999983   34559999999999999999999997542 111100001112345


Q ss_pred             EE--EecccccCCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH----HHHH
Q 021893          124 MV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL----RQHL  197 (306)
Q Consensus       124 ~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l----~~~L  197 (306)
                      ++  |+||.++ |+ ++||+++++++++.++........+.+++.+.++.++++.+..+ ..++..++.+.+    ++.|
T Consensus       201 i~~~S~sK~l~-g~-~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~l  277 (374)
T 2aeu_A          201 LVVTSTDKLME-GP-RGGLLAGKKELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLE-RIRKAFERAKNFDLSKIEKL  277 (374)
T ss_dssp             EEEEETTSSSS-SC-SCEEEEEEHHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHH-HHHHHHHHHHHCCCHHHHHH
T ss_pred             EEEecCccccc-Cc-ceEEEEECHHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHH
Confidence            44  7899986 47 99999999999887765332233356788888888888765321 233344444444    5555


Q ss_pred             HHHHhhC---CCceeeEEEeeeEEEEE-EecCCChh---hHHHHHHHHH-HCCceeccC-----CCCEEEEeCCC-CCCH
Q 021893          198 FKIQQQF---PNYVKEVRGRGLFNAVE-FDKTALPV---SAYDICLKMK-ERGILAKPT-----HDTIVRLTPPL-SISS  263 (306)
Q Consensus       198 ~~~~~~~---~~~~~~~~~~g~~~~i~-~~~~~~~~---~~~~~~~~l~-~~Gi~~~~~-----~~~~lRi~~~~-~~t~  263 (306)
                      .+.....   ++........|.++++. ...   ..   ...+++..++ ++||.+.|+     ..+++|++++. ...+
T Consensus       278 ~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~  354 (374)
T 2aeu_A          278 NKELKAIDDNINIVYERTPTGFVIKRVYKDD---TINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAER  354 (374)
T ss_dssp             HHHHTTTCTTEEEEEEECSSEEEEEEEESSH---HHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGG
T ss_pred             HHhhhhhhhccCcceeeCCceEEEEeecccc---cccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHH
Confidence            5543221   01222334556555442 221   11   1233665554 679999875     24589999753 2223


Q ss_pred             HHHHHHHHHHHHHHhhhcC
Q 021893          264 NELQEGSKALHDVLELDLP  282 (306)
Q Consensus       264 ~~i~~~~~~l~~~l~~~~~  282 (306)
                      .+++.+.+.|+++++ ++.
T Consensus       355 ~~l~~l~~~l~~~l~-~~~  372 (374)
T 2aeu_A          355 IDDNYIIKAIVESIK-MAF  372 (374)
T ss_dssp             SCHHHHHHHHHHHHH-HHT
T ss_pred             HHHHHHHHHHHHHHH-HHh
Confidence            348888888888887 654

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.78  E-value=7.1e-18  Score=153.47  Aligned_cols=208  Identities=14%  Similarity=0.108  Sum_probs=138.9

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE  119 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~  119 (306)
                      ..++. |+++|+++++   +++++|++++++|++|.+.+    +++|.++|++||+++|+||+|++++.....     ..
T Consensus       124 ~~~~~-~~~~l~~~i~---~~~~~v~~~~~~n~~G~~~~----l~~i~~l~~~~~~~li~D~~~~~~~~~~~~-----~~  190 (412)
T 2cb1_A          124 RYVDP-EPEAVREALS---AKTRAVFVETVANPALLVPD----LEALATLAEEAGVALVVDNTFGAAGALCRP-----LA  190 (412)
T ss_dssp             EEECS-SHHHHHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHTCEEEEECGGGTTTTSCCG-----GG
T ss_pred             EEECC-CHHHHHHHhc---cCCeEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCCccccccCCc-----cc
Confidence            44444 4899999887   57999999999999999887    999999999999999999999854211111     12


Q ss_pred             CCCcEE--Eeccccc-CCcccceeeEeCH----------------------------HHHhhcCCCC-ccCCCCCCHHHH
Q 021893          120 VRPDMV--ILGKALG-GGVIPVSAVLADK----------------------------EVMLCIQPGE-HGSTFGGNPLAS  167 (306)
Q Consensus       120 ~~~d~~--s~sK~~~-~G~~~~g~~~~~~----------------------------~~~~~~~~~~-~~~~~~~~~~~~  167 (306)
                      ...|++  |++|.++ +|. ++|+++..+                            ++.+.++... .......++...
T Consensus       191 ~~~di~~~S~~K~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a  269 (412)
T 2cb1_A          191 WGAHVVVESLTKWASGHGS-VLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSLCGMALSPFNA  269 (412)
T ss_dssp             GTCSEEEEETTTTTTCSSC-CCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTTTCCCCCHHHH
T ss_pred             cCCeEEEECCcccccCCCC-cEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHhcCCCCChHHh
Confidence            345655  6889997 576 899877543                            2233332211 111223456666


Q ss_pred             HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE------------------EEeeeEEEEEEecCCChh
Q 021893          168 AVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEV------------------RGRGLFNAVEFDKTALPV  229 (306)
Q Consensus       168 ~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~------------------~~~g~~~~i~~~~~~~~~  229 (306)
                      ..+...++.+.  ...++..++.+++.+.|.+..     .+..+                  ++.+.++.+.+ .     
T Consensus       270 ~~~~~~l~~l~--~~~~~~~~~~~~l~~~L~~~~-----~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~-----  336 (412)
T 2cb1_A          270 YLLFQGLETVA--LRVARMSETARFLAERLQGHP-----KVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-G-----  336 (412)
T ss_dssp             HHHHHHGGGHH--HHHHHHHHHHHHHHHHHHTCT-----TCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-S-----
T ss_pred             HHHHcCCchHH--HHHHHHHHHHHHHHHHHHcCC-----CeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-C-----
Confidence            65555555442  234455567777777776531     11112                  24567778877 3     


Q ss_pred             hHHHHHHHHHHCCceeccC------------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          230 SAYDICLKMKERGILAKPT------------------------------HDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       230 ~~~~~~~~l~~~Gi~~~~~------------------------------~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      +.+.+.+.|.+.||.+ ..                              .++.||++++..+++++++.+.+.|++
T Consensus       337 ~~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~~  411 (412)
T 2cb1_A          337 DLERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALEA  411 (412)
T ss_dssp             SHHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence            2445667777788886 32                              057999999999999999999888764

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.77  E-value=2.1e-18  Score=153.71  Aligned_cols=217  Identities=12%  Similarity=0.026  Sum_probs=142.4

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc--cccccc-ccccCCCCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA--RSGRML-ASDWEEVRP  122 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~--~~g~~~-~~~~~~~~~  122 (306)
                      |+++|+++ .   +++++|++++++|++|..+++.+.+++|.++|++||++||+|++|..+.  ..+... ... .+.+.
T Consensus       127 d~~~l~~~-~---~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~d~  201 (359)
T 3pj0_A          127 TIDDIKSL-R---EPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC-ALFDS  201 (359)
T ss_dssp             CHHHHHTC-S---SCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH-TTCSE
T ss_pred             CHHHHHhc-c---CCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh-ccCCE
Confidence            78898877 3   5788999998887775567789999999999999999999999986321  112111 111 12222


Q ss_pred             cEEEecccccCCcccceeeEeCHHHHhhcCCCC--ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Q 021893          123 DMVILGKALGGGVIPVSAVLADKEVMLCIQPGE--HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKI  200 (306)
Q Consensus       123 d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~  200 (306)
                      .+.|+||+++++. + |+++.++++++.+....  ............+++..+++...  +..++..++++++++.|+++
T Consensus       202 ~~~s~sK~~~~~~-g-g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~  277 (359)
T 3pj0_A          202 VYVSFYKGIGGIA-G-AILAGNDDFVQEAKIWKRRYGGDLISLYPYILSADYYFEKRI--GKMAEYFEAAKGLAERFNSC  277 (359)
T ss_dssp             EEEESSSTTCCSS-C-EEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHG--GGHHHHHHHHHHHHHHHHTS
T ss_pred             EEEeccccCCCcc-e-EEEECCHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHH--HHhHHHHHHHHHHHHHHhhC
Confidence            2348899998665 5 78889999988775321  11122223333344445555442  23445667777777777664


Q ss_pred             HhhCCCceee-EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC------CCEEEEeCCC---CCCHHHHHHHH
Q 021893          201 QQQFPNYVKE-VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------DTIVRLTPPL---SISSNELQEGS  270 (306)
Q Consensus       201 ~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------~~~lRi~~~~---~~t~~~i~~~~  270 (306)
                          ++.... .+..+.++++.++... ..+..++.+.|.++||.+.|+.      .+++|+++..   ..+.+++++++
T Consensus       278 ----~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l  352 (359)
T 3pj0_A          278 ----SGVKTVPEVPVSNMFHVYFENSA-DEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVF  352 (359)
T ss_dssp             ----TTEEEESSSCSSSEEEEEESSCH-HHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHH
T ss_pred             ----CCceeeccCCcceEEEEEecCcc-chhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHH
Confidence                222221 2345666777665311 2346789999999999999862      3578997642   36889999999


Q ss_pred             HHHHHH
Q 021893          271 KALHDV  276 (306)
Q Consensus       271 ~~l~~~  276 (306)
                      ++|.+.
T Consensus       353 ~~l~~~  358 (359)
T 3pj0_A          353 RCLEKE  358 (359)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            998875

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.77  E-value=4.6e-18  Score=153.97  Aligned_cols=246  Identities=16%  Similarity=0.107  Sum_probs=156.9

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+|++...+|++.... ....+-..   .+-|..+..   -..|+++|+++++   +++++|+++   +++|.+.+   
T Consensus       103 gd~vl~~~~~~~~~~~~-~~~~g~~~---~~~~~~~~~---~~~d~~~l~~~i~---~~~~~v~~~---n~tG~~~~---  166 (399)
T 2oga_A          103 GDEVIVPSHTYIASWLA-VSATGATP---VPVEPHEDH---PTLDPLLVEKAIT---PRTRALLPV---HLYGHPAD---  166 (399)
T ss_dssp             TCEEEEESSSCTHHHHH-HHHTTCEE---EEECBCSSS---SSBCHHHHHHHCC---TTEEEECCB---CGGGCCCC---
T ss_pred             cCEEEECCCccHHHHHH-HHHCCCEE---EEEecCCCC---CCcCHHHHHHhcC---CCCeEEEEe---CCcCCccC---
Confidence            35788888888774332 22222110   000111100   1248999999987   468887753   45787777   


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcc-cccccccccccCCCCCcEEEe----cccccC-CcccceeeEeC-HHHHhhcCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGL-ARSGRMLASDWEEVRPDMVIL----GKALGG-GVIPVSAVLAD-KEVMLCIQPG  154 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~-~~~g~~~~~~~~~~~~d~~s~----sK~~~~-G~~~~g~~~~~-~~~~~~~~~~  154 (306)
                       +++|.++|+++|+++|+||+|+.+ ...+..     ++..+|+.++    ||.+++ |  +.|+++.+ +++++.+...
T Consensus       167 -l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~-----~~~~~di~~~S~~~sK~~~~~G--~~g~~~~~~~~~~~~l~~~  238 (399)
T 2oga_A          167 -MDALRELADRHGLHIVEDAAQAHGARYRGRR-----IGAGSSVAAFSFYPGKNLGCFG--DGGAVVTGDPELAERLRML  238 (399)
T ss_dssp             -HHHHHHHHHHHTCEECEECTTCTTCEETTEE-----TTCTTCEEEEECCTTSSSCCSS--CCEEEEESCHHHHHHHHHH
T ss_pred             -HHHHHHHHHHcCCEEEEECcccccCccCCee-----cccccCEEEEeCCCCccCCcCC--ceEEEEeCCHHHHHHHHHH
Confidence             999999999999999999999832 122221     2222466655    599986 6  78888885 7877655431


Q ss_pred             Cc------------cCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceee-EEEeeeEE--E
Q 021893          155 EH------------GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKE-VRGRGLFN--A  219 (306)
Q Consensus       155 ~~------------~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~g~~~--~  219 (306)
                      ..            ..++..+++.++++.++++.+.  ++.++.+++.+++++.|+++    ++.... .+..+..+  .
T Consensus       239 ~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~  312 (399)
T 2oga_A          239 RNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLD--SWNGRRSALAAEYLSGLAGL----PGIGLPVTAPDTDPVWHL  312 (399)
T ss_dssp             HBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHTTTC----TTCBCCCCCTTEECCCSS
T ss_pred             HhcCccccccccccccCCCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccC----CCccccCCCCCCcceeEE
Confidence            11            1223557788887777777653  24556666666666666553    111111 11122222  2


Q ss_pred             EEEecCCChhhHHHHHHHHHHCCceeccCCC---------------------------CEEEEeCCCCCCHHHHHHHHHH
Q 021893          220 VEFDKTALPVSAYDICLKMKERGILAKPTHD---------------------------TIVRLTPPLSISSNELQEGSKA  272 (306)
Q Consensus       220 i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~---------------------------~~lRi~~~~~~t~~~i~~~~~~  272 (306)
                      +.+..    .+..++.+.|.++||.+.+...                           +++|++++..++++|++.++++
T Consensus       313 ~~~~~----~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~  388 (399)
T 2oga_A          313 FTVRT----ERRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDA  388 (399)
T ss_dssp             EEEEC----SSHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHH
T ss_pred             EEEEC----CCHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHH
Confidence            33331    2467899999999999986431                           5799999999999999999999


Q ss_pred             HHHHHhhhcC
Q 021893          273 LHDVLELDLP  282 (306)
Q Consensus       273 l~~~l~~~~~  282 (306)
                      |+++++ ++.
T Consensus       389 l~~~~~-~l~  397 (399)
T 2oga_A          389 VREWAE-RVD  397 (399)
T ss_dssp             HHHHHH-SCC
T ss_pred             HHHHHH-Hhc
Confidence            999998 654

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.77  E-value=1e-18  Score=158.24  Aligned_cols=244  Identities=16%  Similarity=0.088  Sum_probs=153.5

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+||+....|||.+..+....        +......+.+++.+|+++|+++++   +++++|++++++|++|.+.+   
T Consensus       105 gd~Vi~~~~~y~~~~~~~~~~~--------~~~~g~~~~~v~~~d~~~l~~~i~---~~~~~v~~e~~~np~G~~~~---  170 (400)
T 3nmy_A          105 GSHVVAMDDLYGGTFRLFERVR--------RRTAGLDFSFVDLTDPAAFKAAIR---ADTKMVWIETPTNPMLKLVD---  170 (400)
T ss_dssp             TCEEEEESSCCHHHHHHHHHTH--------HHHHCCEEEEECTTSHHHHHHHCC---TTEEEEEEESSCTTTCCCCC---
T ss_pred             CCEEEEeCCCchHHHHHHHHhh--------HhhcCeEEEEECCCCHHHHHHHhc---cCCCEEEEECCCCCCCeeec---
Confidence            3567777777766543322210        000112346677889999999997   57999999999999999887   


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccC-Cccccee--eE-eCHHHHhhcCCCCcc
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGG-GVIPVSA--VL-ADKEVMLCIQPGEHG  157 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~-G~~~~g~--~~-~~~~~~~~~~~~~~~  157 (306)
                       +++|.++|++||+++|+||+|+.. .....   ..++.++.+.|++|+++| |. ++|.  ++ .++++++.+......
T Consensus       171 -l~~i~~la~~~g~~livDe~~~~~-~~~~~---~~~g~div~~S~sK~l~g~g~-~~gG~~vv~~~~~~~~~l~~~~~~  244 (400)
T 3nmy_A          171 -IAAIAVIARKHGLLTVVDNTFASP-MLQRP---LSLGADLVVHSATKYLNGHSD-MVGGIAVVGDNAELAEQMAFLQNS  244 (400)
T ss_dssp             -HHHHHHHHHHTTCEEEEECTTTHH-HHCCG---GGGTCSEEEEETTTTTTCSSS-CCCEEEEECSCHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHcCCEEEEECCCccc-ccCCh---hhcCCcEEEecCccccCCCCC-cceeEEEEeCCHHHHHHHHHHHHh
Confidence             999999999999999999999731 11111   123445556689999994 45 6654  33 367777776654444


Q ss_pred             CCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE------------------EEeeeEEE
Q 021893          158 STFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEV------------------RGRGLFNA  219 (306)
Q Consensus       158 ~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~------------------~~~g~~~~  219 (306)
                      .+...++..+..+...++.+..  ..++..++.+.+.+.|++.    | .+..+                  ++.|.+++
T Consensus       245 ~g~~~~~~~a~~~l~~l~~l~~--r~~~~~~~a~~l~~~L~~~----p-~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~  317 (400)
T 3nmy_A          245 IGGVQGPFDSFLALRGLKTLPL--RMRAHCENALALAQWLETH----P-AIEKVIYPGLASHPQHVLAKRQMSGFGGIVS  317 (400)
T ss_dssp             HCCBCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHTTC----T-TEEEEECTTSTTSTTHHHHHHHCSSCCSEEE
T ss_pred             cCCCCCHHHHHHHHHhHhHHHH--HHHHHHHHHHHHHHHHHcC----C-CEeEEECCCCCCCcCHHHHHHhCCCCCceEE
Confidence            4555677777666666655432  2445555666666665542    2 33333                  56789999


Q ss_pred             EEEecCCChhhHHHHHHHHHHCCceeccC---------------------------CCCEEEEeCCCCCCHHHHHHHHHH
Q 021893          220 VEFDKTALPVSAYDICLKMKERGILAKPT---------------------------HDTIVRLTPPLSISSNELQEGSKA  272 (306)
Q Consensus       220 i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---------------------------~~~~lRi~~~~~~t~~~i~~~~~~  272 (306)
                      +.+...  ......|.+.|.-.++.++.+                           .++.+|++...-    +.+.+++.
T Consensus       318 ~~l~~~--~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle----~~~dli~d  391 (400)
T 3nmy_A          318 IVLKGG--FDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIE----DLGDLRGD  391 (400)
T ss_dssp             EEETTH--HHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSS----CHHHHHHH
T ss_pred             EEeCCc--HHHHHHHHHcCCcceEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcC----CHHHHHHH
Confidence            998631  123455666654333222211                           357899996544    44555566


Q ss_pred             HHHHHh
Q 021893          273 LHDVLE  278 (306)
Q Consensus       273 l~~~l~  278 (306)
                      |+++++
T Consensus       392 l~~al~  397 (400)
T 3nmy_A          392 LERALV  397 (400)
T ss_dssp             HHHHHC
T ss_pred             HHHHHh
Confidence            666654

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.77  E-value=2.3e-17  Score=149.82  Aligned_cols=217  Identities=18%  Similarity=0.191  Sum_probs=144.2

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCc
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d  123 (306)
                      .|+++|++++++.  ++++|+++++++  |...+    +++|.++|++||++||+||+|. |....+... ....  ..|
T Consensus       151 ~d~~~l~~~i~~~--~~~~v~~~~~~~--G~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~-~~~~--~~d  219 (417)
T 3n0l_A          151 IDYEKVREIAKKE--KPKLIVCGASAY--ARVID----FAKFREIADEIGAYLFADIAHIAGLVVAGEHP-SPFP--YAH  219 (417)
T ss_dssp             CCHHHHHHHHHHH--CCSEEEECCSSC--CSCCC----HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC-CCTT--TCS
T ss_pred             cCHHHHHHHHHhc--CCeEEEECCccc--CccCC----HHHHHHHHHHcCCEEEEECccchhhhhcccCC-Cccc--cce
Confidence            4899999999853  567777766553  66766    9999999999999999999975 443333211 1111  235


Q ss_pred             EE--EecccccCCcccceeeEeC-HHHHhhcCCCCc-cCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHH
Q 021893          124 MV--ILGKALGGGVIPVSAVLAD-KEVMLCIQPGEH-GSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQH  196 (306)
Q Consensus       124 ~~--s~sK~~~~G~~~~g~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~  196 (306)
                      ++  |+||++ +|+ +.||++++ +++++.+..... ....+.+...++++..++.....   +++.++++++.+++.+.
T Consensus       220 i~~~s~sK~l-~g~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~  297 (417)
T 3n0l_A          220 VVSSTTHKTL-RGP-RGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANV  297 (417)
T ss_dssp             EEEEESSTTT-CSC-SCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeeCcccc-CCC-CeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence            55  566999 566 78999998 788777654322 22223455566666666665432   34566777777888888


Q ss_pred             HHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----------CCCEEEEeCCC----CCC
Q 021893          197 LFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----------HDTIVRLTPPL----SIS  262 (306)
Q Consensus       197 L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----------~~~~lRi~~~~----~~t  262 (306)
                      |++.+  +  .+......+.++++.+...  +.+...+.+.|.++||.+.+.          ....+|++++.    ..+
T Consensus       298 L~~~g--~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~  371 (417)
T 3n0l_A          298 LMDRK--F--KLVSDGTDNHLVLMSFLDR--EFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFK  371 (417)
T ss_dssp             HHHTT--C--EEGGGSCSSSEEEEECTTS--SSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCC
T ss_pred             HHhCC--c--eeccCCCCceEEEEEcccC--CCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCC
Confidence            77632  1  1111113345667766531  235678888899999998742          23569998643    257


Q ss_pred             HHHHHHHHHHHHHHHhhhc
Q 021893          263 SNELQEGSKALHDVLELDL  281 (306)
Q Consensus       263 ~~~i~~~~~~l~~~l~~~~  281 (306)
                      ++++++++++|+++++ +.
T Consensus       372 ~~~i~~~~~~l~~~l~-~~  389 (417)
T 3n0l_A          372 EKEMEIVSNYIADILD-DV  389 (417)
T ss_dssp             HHHHHHHHHHHHHHHH-TT
T ss_pred             HHHHHHHHHHHHHHHh-cc
Confidence            8999999999999998 54

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.76  E-value=7.6e-18  Score=154.86  Aligned_cols=225  Identities=13%  Similarity=0.095  Sum_probs=142.3

Q ss_pred             CCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCC
Q 021893           44 FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRP  122 (306)
Q Consensus        44 ~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~  122 (306)
                      ..|+++|++++++.  ++++++++.++++++.  +    +++|+++|++||++||+||+|. |+...|.... ...+.+.
T Consensus       171 ~~d~~~l~~~i~~~--~~~~i~~~~~~~~~~~--~----l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~-~~~~~di  241 (447)
T 3h7f_A          171 LIDMDAVRATALEF--RPKVIIAGWSAYPRVL--D----FAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPS-PVPHADV  241 (447)
T ss_dssp             SCCHHHHHHHHHHH--CCSEEEEECSSCCSCC--C----HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCC-STTTCSE
T ss_pred             CcCHHHHHHHHHhc--CCeEEEEcCCCCCCcc--C----HHHHHHHHHHcCCEEEEECCchhhhhcCCCCCC-CCCCCcE
Confidence            35899999999753  4567777544444432  4    9999999999999999999984 5544443221 1112222


Q ss_pred             cEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC-CCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHH
Q 021893          123 DMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG-GNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLF  198 (306)
Q Consensus       123 d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~  198 (306)
                      -+.|+||+++ |+ +.|++++++++++.+........+. .+...++++.+++.....   ++..+++.++.+++.+.|+
T Consensus       242 ~~~s~sK~l~-G~-~gG~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~  319 (447)
T 3h7f_A          242 VSTTVHKTLG-GG-RSGLIVGKQQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLM  319 (447)
T ss_dssp             EEEESSGGGC-CC-SCEEEEECGGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEecCCcCCC-CC-CeEEEEECHHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHH
Confidence            2347889995 67 8899999998877665432222222 233345555555554433   3366778888888888887


Q ss_pred             HHHhhCCCcee-eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----cC------CCCEEEEeCCCC----CCH
Q 021893          199 KIQQQFPNYVK-EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----PT------HDTIVRLTPPLS----ISS  263 (306)
Q Consensus       199 ~~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~------~~~~lRi~~~~~----~t~  263 (306)
                      +.....++... .....+.++++++...  +.....+.+.|.++||.+.    |.      .++.+|++++..    .++
T Consensus       320 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~  397 (447)
T 3h7f_A          320 APDVAKAGVSVVSGGTDVHLVLVDLRDS--PLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGD  397 (447)
T ss_dssp             SHHHHHTTCEEGGGSCSSSEEEEECTTS--SCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCH
T ss_pred             hccccCCCeEEecCCCCCCEEEEEcCCC--CCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCH
Confidence            65111111111 1112455666666431  2345566777777799988    32      356799987543    679


Q ss_pred             HHHHHHHHHHHHHHhhhcC
Q 021893          264 NELQEGSKALHDVLELDLP  282 (306)
Q Consensus       264 ~~i~~~~~~l~~~l~~~~~  282 (306)
                      ++++++++.|++++. +..
T Consensus       398 eei~~~~~~l~~~l~-~~~  415 (447)
T 3h7f_A          398 TEFTEVADIIATALA-TGS  415 (447)
T ss_dssp             HHHHHHHHHHHHHHH-SGG
T ss_pred             HHHHHHHHHHHHHHh-ccC
Confidence            999999999999998 543

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.76  E-value=1.2e-17  Score=150.55  Aligned_cols=217  Identities=17%  Similarity=0.175  Sum_probs=142.2

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCc
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d  123 (306)
                      .|+++|++.++   +++++|++++   ++|...+    +++|.++|++||+++|+||+|+ |+...+..     ++. .|
T Consensus       115 ~d~~~l~~~l~---~~~~~v~~~~---~~G~~~~----~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~-----~~~-~d  178 (393)
T 1mdo_A          115 VTPEHIEAAIT---PQTKAIIPVH---YAGAPAD----LDAIYALGERYGIPVIEDAAHATGTSYKGRH-----IGA-RG  178 (393)
T ss_dssp             BCHHHHHHHCC---TTEEEECCBC---GGGCCCC----HHHHHHHHHHHTCCBCEECTTCTTCEETTEE-----TTS-SS
T ss_pred             CCHHHHHHhcC---CCceEEEEeC---CCCCcCC----HHHHHHHHHHcCCeEEEECccccCCeECCee-----cCC-CC
Confidence            48999999987   4688888865   4677766    9999999999999999999998 44333322     222 56


Q ss_pred             EE--Eec--ccccCCcccceeeEeC-HHHHhhcCCCCccC---------------C---------CCCCHHHHHHHHHHH
Q 021893          124 MV--ILG--KALGGGVIPVSAVLAD-KEVMLCIQPGEHGS---------------T---------FGGNPLASAVAIASL  174 (306)
Q Consensus       124 ~~--s~s--K~~~~G~~~~g~~~~~-~~~~~~~~~~~~~~---------------~---------~~~~~~~~~aa~~al  174 (306)
                      ++  |++  |.++||  ++|+++.+ +++++.+.......               .         +..+.+..+++...+
T Consensus       179 ~~~~S~~k~K~l~~~--~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l  256 (393)
T 1mdo_A          179 TAIFSFHAIKNITCA--EGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQL  256 (393)
T ss_dssp             EEEEECCTTSSSCSS--SCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHH
T ss_pred             eEEEeCCCCCccccc--cceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHH
Confidence            66  555  888764  78899886 77776554211100               0         223556555555555


Q ss_pred             HHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCce-eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----
Q 021893          175 DVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYV-KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----  249 (306)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----  249 (306)
                      +.+  ++..++.+++.+++++.|++......... ...+..+.++++.++....+.+..++.+.|.++||.+.++.    
T Consensus       257 ~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~  334 (393)
T 1mdo_A          257 QKL--DALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAH  334 (393)
T ss_dssp             HTH--HHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGG
T ss_pred             HHH--HHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCCceeEEEEEEecccccccCHHHHHHHHHhCCCCcccccCccc
Confidence            443  23456666677777777765421100000 01234455678877620001356789999999999988742    


Q ss_pred             ---------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          250 ---------------------DTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       250 ---------------------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                                           ...+|++++..++++|++.++++|+++++ ...
T Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~-~~~  387 (393)
T 1mdo_A          335 TQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAG-QGS  387 (393)
T ss_dssp             GSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC----
T ss_pred             cChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHh-cCC
Confidence                                 23799998888999999999999999988 544

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.76  E-value=6.3e-18  Score=150.53  Aligned_cols=218  Identities=13%  Similarity=0.085  Sum_probs=142.3

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc--cccccccc-ccccCCCC
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG--LARSGRML-ASDWEEVR  121 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g--~~~~g~~~-~~~~~~~~  121 (306)
                      .|+++|+++     .+++++++++++|++|..+++.+.+++|.++|++||++||+||+|..  ....|... ... ...+
T Consensus       125 ~d~~~l~~~-----~~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~d  198 (357)
T 3lws_A          125 MTLDEIKAL-----PDIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA-GLFD  198 (357)
T ss_dssp             CCHHHHHTC-----CSCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH-TTSS
T ss_pred             cCHHHHhcC-----cCcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH-hcCC
Confidence            378888876     13788899988888744667899999999999999999999999861  11122211 111 1122


Q ss_pred             CcEEEecccccCCcccceeeEeCHHHHhhcCCCC--ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Q 021893          122 PDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE--HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFK  199 (306)
Q Consensus       122 ~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~  199 (306)
                      .-+.|+||++++.. . |++++++++++.+....  ...........++++.++++... +. .++..++++++.+.|++
T Consensus       199 ~~~~s~sK~~~~~~-g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~-~~~~~~~~~~l~~~L~~  274 (357)
T 3lws_A          199 SIYISFYKGLGGIA-G-AILAGPAAFCQTARIWKRRYGGDLISLYPYIVSADYYYELRK-DR-MGQYYEQAKQLAEQFNA  274 (357)
T ss_dssp             EEEEESSSTTCCSS-C-EEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHT-TC-HHHHHHHHHHHHHHHHT
T ss_pred             EEEEeccccCCCCc-e-EEEEcCHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHh
Confidence            22459999996543 3 88999999888775321  11122223344444556666532 22 34456667777777765


Q ss_pred             HHhhCCCcee-eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC---C--CEEEEeCCC---CCCHHHHHHHH
Q 021893          200 IQQQFPNYVK-EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH---D--TIVRLTPPL---SISSNELQEGS  270 (306)
Q Consensus       200 ~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~--~~lRi~~~~---~~t~~~i~~~~  270 (306)
                      +    ++... ..+..+.++|+.++... .....++.+.|.++||.+.|+.   +  .++|+++..   ..+.+++++++
T Consensus       275 ~----~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al  349 (357)
T 3lws_A          275 L----PGVHTTPEVPVSNMFHLHFDGQA-ADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGF  349 (357)
T ss_dssp             S----TTEEEESSSCSSSEEEEEEESCH-HHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHH
T ss_pred             C----CCCeeccCCCcceEEEEEecCCh-HHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHHHHH
Confidence            4    22222 23456778888887411 1236788999999999999762   2  389998653   36889999999


Q ss_pred             HHHHHHH
Q 021893          271 KALHDVL  277 (306)
Q Consensus       271 ~~l~~~l  277 (306)
                      ++|++++
T Consensus       350 ~~l~~al  356 (357)
T 3lws_A          350 ARLRQAF  356 (357)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHhc
Confidence            9998765

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=99.75  E-value=2.1e-17  Score=148.91  Aligned_cols=211  Identities=14%  Similarity=0.117  Sum_probs=141.4

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |++.|+++++   +++++|+   +++++|.+.+    +++|.++|++||++||+|++|+ |....|..  ...++ ..++
T Consensus       115 d~~~l~~~i~---~~~~~v~---~~n~tG~~~~----l~~i~~la~~~~~~li~D~a~~~g~~~~~~~--~~~~~-~i~~  181 (388)
T 1b9h_A          115 DPEAVAAAVT---PRTKVIM---PVHMAGLMAD----MDALAKISADTGVPLLQDAAHAHGARWQGKR--VGELD-SIAT  181 (388)
T ss_dssp             CHHHHHHHCC---TTEEEEC---CBCGGGCCCC----HHHHHHHHHHHTCCBCEECTTCTTCEETTEE--GGGSS-SCEE
T ss_pred             CHHHHHHhcC---cCceEEE---EeCCccCcCC----HHHHHHHHHHcCCEEEEecchhcCCccCCee--ccccc-ceEE
Confidence            7999999987   4688777   5566888877    9999999999999999999998 44333332  22333 4567


Q ss_pred             EEec--ccccCCcccceeeEeCHH-H--HhhcCCCCc---------------cCCCCCCHHHHHHHHHHHHHHhhccHHH
Q 021893          125 VILG--KALGGGVIPVSAVLADKE-V--MLCIQPGEH---------------GSTFGGNPLASAVAIASLDVIRDEKLAE  184 (306)
Q Consensus       125 ~s~s--K~~~~G~~~~g~~~~~~~-~--~~~~~~~~~---------------~~~~~~~~~~~~aa~~al~~~~~~~~~~  184 (306)
                      .|||  |.++| . ++|+++++++ +  ++.+.....               +..+..+.+.++++...++.+.  +..+
T Consensus       182 ~S~s~~K~l~g-~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~--~~~~  257 (388)
T 1b9h_A          182 FSFQNGKLMTA-G-EGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARLD--EQIA  257 (388)
T ss_dssp             EECCTTSSSCS-S-SCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHH--HHHH
T ss_pred             EEccCCCcccC-C-CeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHHHHHH--HHHH
Confidence            7888  56655 4 7899998765 5  454421100               1112245555555545554432  2456


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCceeeE------EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCC--------
Q 021893          185 RSAHLGEELRQHLFKIQQQFPNYVKEV------RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHD--------  250 (306)
Q Consensus       185 ~~~~~~~~l~~~L~~~~~~~~~~~~~~------~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--------  250 (306)
                      +.+++.+++.+.|+++    ++.....      +..+.++++.++... ..+..++.+.|.++||.++++..        
T Consensus       258 ~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~  332 (388)
T 1b9h_A          258 VRDERWTLLSRLLGAI----DGVVPQGGDVRADRNSHYMAMFRIPGLT-EERRNALVDRLVEAGLPAFAAFRAIYRTDAF  332 (388)
T ss_dssp             HHHHHHHHHHHHHHTS----TTCEECCCCTTCCBCCCSEEEEECTTCC-HHHHHHHHHHHHHTTCCEEECCCCGGGSHHH
T ss_pred             HHHHHHHHHHHHhccC----CCccccCCCcCCCccceEEEEEEeCCcC-cccHHHHHHHHHHCCCCcccccCccccChHh
Confidence            6667777777777653    1122111      234678888776310 13577899999999999875311        


Q ss_pred             -------------------------CEEEEeCCCCC-CHHHHHHHHHHHHHHHh
Q 021893          251 -------------------------TIVRLTPPLSI-SSNELQEGSKALHDVLE  278 (306)
Q Consensus       251 -------------------------~~lRi~~~~~~-t~~~i~~~~~~l~~~l~  278 (306)
                                               +.||++++..+ |++|++.+++.|+++++
T Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~  386 (388)
T 1b9h_A          333 WELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVA  386 (388)
T ss_dssp             HHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHH
T ss_pred             HhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHh
Confidence                                     25899988888 99999999999999876

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=99.75  E-value=1.1e-16  Score=149.11  Aligned_cols=225  Identities=12%  Similarity=0.088  Sum_probs=144.4

Q ss_pred             CHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893           46 DITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R  121 (306)
Q Consensus        46 d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~  121 (306)
                      |+++|+++|+++   +.++.+|+++.+++++|.+.+    +++|.++|++||+++++|++|+++..... +.....++ .
T Consensus       241 d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~----l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~  315 (497)
T 2qma_A          241 DITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDD----LDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVER  315 (497)
T ss_dssp             CGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGG
T ss_pred             CHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCC----HHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCccc
Confidence            789999999853   122558888888888998877    99999999999999999999997644333 32223344 5


Q ss_pred             CcEEEe--cccccCCcccceeeEeCH-HHHhhcCCCCc----cCCCCCCHHH----------HHHHHHHHHHHhhc---c
Q 021893          122 PDMVIL--GKALGGGVIPVSAVLADK-EVMLCIQPGEH----GSTFGGNPLA----------SAVAIASLDVIRDE---K  181 (306)
Q Consensus       122 ~d~~s~--sK~~~~G~~~~g~~~~~~-~~~~~~~~~~~----~~~~~~~~~~----------~~aa~~al~~~~~~---~  181 (306)
                      +|++++  +|++++++ ++|++++++ ..++.+.....    ..+...+...          ......+++.+..+   +
T Consensus       316 ~D~i~~s~hK~l~~p~-~~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~  394 (497)
T 2qma_A          316 AHSISVDFHKLFYQTI-SCGALLVNDKSNFKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGD  394 (497)
T ss_dssp             CSEEEEETTTTTCCCS-SCEEEEESCGGGGGGGCC--------------------CCSCCCTHHHHHHHHHHTCHHHHHH
T ss_pred             CCEEEEcchhccCCCc-ceEEEEEeCHHHHHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHH
Confidence            677755  79999888 999998864 44454432110    0000011111          11223445544332   3


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCCh--hhHHHHHHHHHHCCceecc----CCCCEEEE
Q 021893          182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALP--VSAYDICLKMKERGILAKP----THDTIVRL  255 (306)
Q Consensus       182 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~--~~~~~~~~~l~~~Gi~~~~----~~~~~lRi  255 (306)
                      ..++..++++++.+.|++.    ++.....+..+.++.+.+.+....  ....++.+.|.++|+.+.+    .+.+++|+
T Consensus       395 ~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRi  470 (497)
T 2qma_A          395 MYDHLLAQTLEVADMIRTN----DQFELLAEPSLSTVLFRATHETADLDELNKALRLEALTRGIAVLGETIVDGKTALKF  470 (497)
T ss_dssp             HHHHHHHHHHHHHHHHHTC----TTEEECSCCSSSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhhC----CCeEEEcCCCceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEE
Confidence            4566667777777777653    112111123345667766532101  1234678889999988864    23568999


Q ss_pred             eC-CCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          256 TP-PLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       256 ~~-~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ++ +..++++|++.++++|+++++ ++
T Consensus       471 s~~~~~~t~edi~~~~~~l~~~~~-~~  496 (497)
T 2qma_A          471 TILNPCLTTSDFESLLSKINMLAV-EL  496 (497)
T ss_dssp             ECCCTTCCHHHHHHHHHHHHHHHH-HC
T ss_pred             EecCCCCCHHHHHHHHHHHHHHHH-hh
Confidence            97 788999999999999999887 54

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.74  E-value=1.6e-17  Score=148.77  Aligned_cols=208  Identities=14%  Similarity=0.192  Sum_probs=134.4

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |+++|++.++   +++++|+   +++++|...+    +++|.++|++||+++|+||+|+.+..    +.....+...|++
T Consensus       114 d~~~l~~~~~---~~~~~v~---~~n~~G~~~~----~~~i~~~~~~~~~~li~D~~~~~g~~----~~~~~~~~~~d~~  179 (374)
T 3uwc_A          114 DPEKIEAAIT---DKTKAIM---PVHYTGNIAD----MPALAKIAKKHNLHIVEDACQTILGR----INDKFVGSWGQFA  179 (374)
T ss_dssp             CGGGTGGGCC---TTEEEEC---CBCGGGCCCC----HHHHHHHHHHTTCEEEEECTTCTTCE----ETTEETTSSSSEE
T ss_pred             CHHHHHHhCC---CCceEEE---EeCCcCCcCC----HHHHHHHHHHcCCEEEEeCCCccCce----eCCeeccccccEE
Confidence            7888888887   4688777   5567888777    99999999999999999999983211    2222333335777


Q ss_pred             Eec----ccccC-CcccceeeEeC-HHHHhhcCCCC------------ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHH
Q 021893          126 ILG----KALGG-GVIPVSAVLAD-KEVMLCIQPGE------------HGSTFGGNPLASAVAIASLDVIRDEKLAERSA  187 (306)
Q Consensus       126 s~s----K~~~~-G~~~~g~~~~~-~~~~~~~~~~~------------~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~  187 (306)
                      ++|    |.+++ |  ..|+++.+ +++++.+....            ....+..+.+..+++...++.+  +++.++.+
T Consensus       180 ~~s~~~~K~l~~~g--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~--~~~~~~~~  255 (374)
T 3uwc_A          180 CFSLHPLKNLNVWS--DAGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMNQL--ETITEKRR  255 (374)
T ss_dssp             EEECSSSSSSCCSS--CCEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGGGH--HHHHHHHH
T ss_pred             EEeCCCCCcCCccc--eeEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHHHH--HHHHHHHH
Confidence            555    99986 5  36777765 45655443211            1112223444444443333222  33566677


Q ss_pred             HHHHHHHHHHHHHHh--hCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCC--------------
Q 021893          188 HLGEELRQHLFKIQQ--QFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHD--------------  250 (306)
Q Consensus       188 ~~~~~l~~~L~~~~~--~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--------------  250 (306)
                      ++.+++++.|+++..  ..+   .... ....+..+.+..    .+..++.+.|.++||.+++..+              
T Consensus       256 ~~~~~l~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~  328 (374)
T 3uwc_A          256 GIAHLYDQSFVDLSEFIDVP---VRREGVYHVFHIYVLRV----KYRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGY  328 (374)
T ss_dssp             HHHHHHHHHTGGGTTTEECC---CCCTTEECCCSSEEEEE----TTHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCC
T ss_pred             HHHHHHHHHhccCCCeEEec---cCCCCCceeeEEEEEEc----CCHHHHHHHHHHCCCccccCCCCccccChhhhhcCC
Confidence            777777777766531  110   0001 112222222221    2567899999999999887531              


Q ss_pred             -------------CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          251 -------------TIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       251 -------------~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                   +.+|++++..+|++||++++++|+++++
T Consensus       329 ~~~~~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~  369 (374)
T 3uwc_A          329 QQGDFPMAEKHGEAVITLPAHPYLTEEEINYIIKKVREFYL  369 (374)
T ss_dssp             CTTSCHHHHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHH
T ss_pred             ccCCCccHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHH
Confidence                         6899999999999999999999999998

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.74  E-value=1.3e-17  Score=150.38  Aligned_cols=239  Identities=14%  Similarity=0.184  Sum_probs=150.2

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC------CCHHHHHHHHHhcCCcEEEEEEccccCCCCcc
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF------GDITALEKIFKESGDQIAGFLFEPIQGEAGVI   76 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~   76 (306)
                      .+|++...+|++....+......             ++.++.      .|++.|+++++   +++++|+++   +++|..
T Consensus        97 d~vl~~~~~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~---n~tG~~  157 (391)
T 3dr4_A           97 DEVIVPSLTYIASANSVTYCGAT-------------PVLVDNDPRTFNLDAAKLEALIT---PRTKAIMPV---HLYGQI  157 (391)
T ss_dssp             CEEEEESSSCTHHHHHHHHTTCE-------------EEEECBCTTTCSBCGGGSGGGCC---TTEEEECCB---CGGGCC
T ss_pred             CEEEECCCchHHHHHHHHHCCCE-------------EEEEecCccccCcCHHHHHHhcC---CCceEEEEE---CCCCCh
Confidence            56777777777655443322221             112222      17888888886   478888853   467877


Q ss_pred             cCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcEEEec----ccccCCcccceeeEeC-HHHHhh
Q 021893           77 IPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDMVILG----KALGGGVIPVSAVLAD-KEVMLC  150 (306)
Q Consensus        77 ~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~~s~s----K~~~~G~~~~g~~~~~-~~~~~~  150 (306)
                      .+    +++|.++|++||+++|+|++|+ |....+..     .+...|+.++|    |++++|  +.|+++.+ +++++.
T Consensus       158 ~~----~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~-----~~~~~di~~~S~s~~K~l~~g--~gg~~~~~~~~~~~~  226 (391)
T 3dr4_A          158 CD----MDPILEVARRHNLLVIEDAAEAVGATYRGKK-----SGSLGDCATFSFFGNAIITTG--EGGMITTNDDDLAAK  226 (391)
T ss_dssp             CC----HHHHHHHHHHTTCEEEEECTTCTTCEETTEE-----TTSSSSEEEEECBTTSSSCCB--SCEEEEESCHHHHHH
T ss_pred             hh----HHHHHHHHHHcCCEEEEECcccccceECCee-----ecccCCEEEEECCCCCcCCcC--CeEEEEECCHHHHHH
Confidence            77    9999999999999999999998 33222221     12223555444    988764  67777775 556544


Q ss_pred             cCCCC--------------ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceee-----E
Q 021893          151 IQPGE--------------HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKE-----V  211 (306)
Q Consensus       151 ~~~~~--------------~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-----~  211 (306)
                      +....              ....+..+.+..+++...++.+  ++..++.+++.+++++.|+++...   ....     .
T Consensus       227 ~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~---~~~~~~~~~~  301 (391)
T 3dr4_A          227 MRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERV--DEHLAARERVVGWYEQKLARLGNR---VTKPHVALTG  301 (391)
T ss_dssp             HHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHGGGTTS---EECCCCCTTS
T ss_pred             HHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCCcc---ccCcCCCCCC
Confidence            43210              1111334455544444444333  345677778888888888776211   1111     1


Q ss_pred             EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC------------------------CCEEEEeCCCCCCHHHHH
Q 021893          212 RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------------------------DTIVRLTPPLSISSNELQ  267 (306)
Q Consensus       212 ~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------------------------~~~lRi~~~~~~t~~~i~  267 (306)
                      ...+.++++.++.. .+.+..++.+.|.++||.++++.                        .+.+|++++..+|++||+
T Consensus       302 ~~~~~~~~i~~~~~-~~~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~edi~  380 (391)
T 3dr4_A          302 RHVFWMYTVRLGEG-LSTTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADID  380 (391)
T ss_dssp             CCCCSSEEEEECSS-CSSCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCTTCCHHHHH
T ss_pred             cceeEEEEEEECCc-cchhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCCCCCHHHHH
Confidence            12333456666531 13457889999999999988653                        357999999999999999


Q ss_pred             HHHHHHHHHH
Q 021893          268 EGSKALHDVL  277 (306)
Q Consensus       268 ~~~~~l~~~l  277 (306)
                      +++++|++++
T Consensus       381 ~~~~~l~~~l  390 (391)
T 3dr4_A          381 RVIAALDQVL  390 (391)
T ss_dssp             HHHHHHHTTC
T ss_pred             HHHHHHHHHh
Confidence            9999998754

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.74  E-value=2e-17  Score=147.97  Aligned_cols=212  Identities=15%  Similarity=0.173  Sum_probs=136.2

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |+++|++.++   +++++|+++++   +|.+.+    +++|.++|++||+++|+||+|+... .........++ +.++.
T Consensus       110 d~~~l~~~i~---~~~~~v~~~~~---tG~~~~----l~~i~~l~~~~~~~li~D~a~~~~~-~~~~~~~~~~~-~i~~~  177 (375)
T 2fnu_A          110 DELALEKLIN---ERTKAIVSVDY---AGKSVE----VESVQKLCKKHSLSFLSDSSHALGS-EYQNKKVGGFA-LASVF  177 (375)
T ss_dssp             CGGGSGGGCC---TTEEEEEEECG---GGCCCC----HHHHHHHHHHHTCEEEEECTTCTTC-EETTEETTSSS-SEEEE
T ss_pred             CHHHHHhhcC---cCceEEEEeCC---cCCccC----HHHHHHHHHHcCCEEEEECccccCC-eECCeeccccC-CeEEE
Confidence            7888888886   46787666554   787777    9999999999999999999998321 11111112222 34566


Q ss_pred             Eec--ccccCCcccceeeEe-C-HHHHhhcCCCCc----------------cCCCCCCHHHHHHHHHHHHHHhhccHHHH
Q 021893          126 ILG--KALGGGVIPVSAVLA-D-KEVMLCIQPGEH----------------GSTFGGNPLASAVAIASLDVIRDEKLAER  185 (306)
Q Consensus       126 s~s--K~~~~G~~~~g~~~~-~-~~~~~~~~~~~~----------------~~~~~~~~~~~~aa~~al~~~~~~~~~~~  185 (306)
                      |+|  |.+++|   +|++++ + +++++.+.+...                ...+..+.+..+++...++.+  ++..++
T Consensus       178 s~s~~K~~~~g---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~  252 (375)
T 2fnu_A          178 SFHAIKPITTA---EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKA--PFLMQK  252 (375)
T ss_dssp             ECCTTSSSCCS---SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTH--HHHHHH
T ss_pred             eCCCCCCcccc---CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHHHHH--HHHHHH
Confidence            888  999654   566666 3 667665543211                111234455544444433322  335666


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCceeeE-----EEeeeEEEEEEecCCChh-hHHHHHHHHHHCCceeccC----C------
Q 021893          186 SAHLGEELRQHLFKIQQQFPNYVKEV-----RGRGLFNAVEFDKTALPV-SAYDICLKMKERGILAKPT----H------  249 (306)
Q Consensus       186 ~~~~~~~l~~~L~~~~~~~~~~~~~~-----~~~g~~~~i~~~~~~~~~-~~~~~~~~l~~~Gi~~~~~----~------  249 (306)
                      .+++.+++.+.|+++    ++.....     ...+.++++.++..  .. +..++.+.|.++||.+...    .      
T Consensus       253 ~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~  326 (375)
T 2fnu_A          253 REEAALTYDRIFKDN----PYFTPLHPLLKDKSSNHLYPILMHQK--FFTCKKLILESLHKRGILAQVHYKPIYQYQLYQ  326 (375)
T ss_dssp             HHHHHHHHHHHHTTC----SSEEESGGGCSSCCCCSCEEEEECGG--GGGGHHHHHHHHHHTTEECBCCCCCGGGSHHHH
T ss_pred             HHHHHHHHHHHhhcC----CCccccCCCCCCCcceEEEEEEeCcc--ccchHHHHHHHHHHCCCCccccccccccchhhh
Confidence            777777777777663    1111111     12334456666531  12 6778999999999998831    0      


Q ss_pred             ---------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          250 ---------------DTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       250 ---------------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                                     .+++|++++..++++|+++++++|+++++ ++
T Consensus       327 ~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~-~~  372 (375)
T 2fnu_A          327 QLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFE-SF  372 (375)
T ss_dssp             HHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHH-HH
T ss_pred             cCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHH-Hh
Confidence                           16899999888999999999999999988 54

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.74  E-value=9.9e-18  Score=152.94  Aligned_cols=241  Identities=18%  Similarity=0.115  Sum_probs=149.3

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccc-cCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCCh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKV-DFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPD   80 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~   80 (306)
                      +.+||+...+||+..........    ..     ...+..+ +.+|+++|+++|+   +++++|++++++|++|.+.+  
T Consensus        97 gd~vi~~~~~~~~~~~~~~~~~~----~~-----g~~~~~~~~~~d~~~l~~~i~---~~~~~v~~~~~~n~~G~~~~--  162 (421)
T 2ctz_A           97 GDNIVSTPNLYGGTFNQFKVTLK----RL-----GIEVRFTSREERPEEFLALTD---EKTRAWWVESIGNPALNIPD--  162 (421)
T ss_dssp             TCEEEECSCCCHHHHHHHHTHHH----HT-----TCEEEECCTTCCHHHHHHHCC---TTEEEEEEESSCTTTCCCCC--
T ss_pred             CCEEEEeCCCchHHHHHHHHHHH----Hc-----CCEEEEECCCCCHHHHHHhhc---cCCeEEEEECCCCCCCcccC--
Confidence            45788888888886544321110    00     0123455 6679999999997   57999999999999999888  


Q ss_pred             hHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--EecccccC-CcccceeeEeC---HHH----Hhh
Q 021893           81 GYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLAD---KEV----MLC  150 (306)
Q Consensus        81 ~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~g~~~~~---~~~----~~~  150 (306)
                        +++|.++|++||+++|+|++|++++..+..+     +..+|++  |++|++++ |. ++|++++.   +++    ++.
T Consensus       163 --l~~i~~~a~~~g~~livD~~~~~~g~~~~~~-----~~~~Di~~~s~~K~l~~~g~-~~G~~~~~~~~~~~~~~~~~~  234 (421)
T 2ctz_A          163 --LEALAQAAREKGVALIVDNTFGMGGYLLRPL-----AWGAALVTHSLTKWVGGHGA-VIAGAIVDGGNFPWEGGRYPL  234 (421)
T ss_dssp             --HHHHHHHHHHHTCEEEEECGGGGGGTSCCGG-----GGTCSEEEEETTTTTTCSSC-CCCEEEEECSCSCCTTTTCHH
T ss_pred             --HHHHHHHHHHcCCEEEEECCcccccccCCcc-----ccCCeEEEECCcccccCCCC-cEEEEEEeccchhhcccchhh
Confidence              9999999999999999999995454433332     2346766  88899994 76 88877663   122    122


Q ss_pred             cCCC---Ccc-----------------------CCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhC
Q 021893          151 IQPG---EHG-----------------------STFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQF  204 (306)
Q Consensus       151 ~~~~---~~~-----------------------~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  204 (306)
                      +.+.   .+.                       .....+++.+.++...++.+..  ..++..++.+++.+.|++.    
T Consensus       235 l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~--r~~~~~~~a~~l~~~L~~~----  308 (421)
T 2ctz_A          235 LTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLSL--RAERHVENTLHLAHWLLEQ----  308 (421)
T ss_dssp             HHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHTC----
T ss_pred             hccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcchHHH--HHHHHHHhHHHHHHHHHhC----
Confidence            2211   000                       1123455655555555554422  2334445666666666553    


Q ss_pred             CCceeeE-------------------EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----------------
Q 021893          205 PNYVKEV-------------------RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-----------------  248 (306)
Q Consensus       205 ~~~~~~~-------------------~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----------------  248 (306)
                      | .+..+                   ++.|.++.|.+...  ......+.+.+...++.++.+                 
T Consensus       309 p-~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~--~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~  385 (421)
T 2ctz_A          309 P-QVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGG--YEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQL  385 (421)
T ss_dssp             T-TEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTH--HHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTS
T ss_pred             C-CeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCC--HHHHHHHHHhCCcceecccCCCCCceeeCCcccccccC
Confidence            2 22222                   35688889988631  123444555554433333211                 


Q ss_pred             ----------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          249 ----------HDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       249 ----------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                                .++.||++++.    ++++++++.|++++
T Consensus       386 ~~~~~~~~g~~~~~vRlS~g~----e~~~~li~~l~~al  420 (421)
T 2ctz_A          386 SPEEQAQAGVSPEMVRLSVGL----EHVEDLKAELKEAL  420 (421)
T ss_dssp             CHHHHHHHTCCTTEEEEECCS----SCHHHHHHHHHHHT
T ss_pred             CHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHh
Confidence                      14899999654    57788888887765

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.74  E-value=6.4e-18  Score=151.52  Aligned_cols=209  Identities=13%  Similarity=0.138  Sum_probs=133.1

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |+++|+++++   +++++|+   +++++|...+    +++|.++|++||+++|+|++|+..    ..+....++...|+.
T Consensus       113 d~~~l~~~l~---~~~~~v~---~~n~~G~~~~----l~~i~~l~~~~~~~li~D~a~~~g----~~~~~~~~~~~~d~~  178 (373)
T 3frk_A          113 DPSLIESAIT---EKTKAII---AVHLYGQPAD----MDEIKRIAKKYNLKLIEDAAQAHG----SLYKGMKVGSLGDAA  178 (373)
T ss_dssp             CGGGTGGGCC---TTEEEEE---EECCTTCCCC----HHHHHHHHHHHTCEEEEECTTCTT----CEETTEETTSSSSEE
T ss_pred             CHHHHHHhcC---CCCeEEE---EECCCcCccc----HHHHHHHHHHcCCEEEEECCcccC----CEECCEeccccccEE
Confidence            7888988887   4788888   4457888777    999999999999999999999821    112222334335777


Q ss_pred             Eec----ccccC-CcccceeeEeC-HHHHhhcCCCC------------ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHH
Q 021893          126 ILG----KALGG-GVIPVSAVLAD-KEVMLCIQPGE------------HGSTFGGNPLASAVAIASLDVIRDEKLAERSA  187 (306)
Q Consensus       126 s~s----K~~~~-G~~~~g~~~~~-~~~~~~~~~~~------------~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~  187 (306)
                      ++|    |.+++ |  ..|+++.+ +++++.++...            .+..+..+.+..+++...++.+  ++..++.+
T Consensus       179 ~~S~~~~K~l~~~g--~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~~~--~~~~~~~~  254 (373)
T 3frk_A          179 GFSFYPAKNLGSLG--DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLKYL--DKWNEERR  254 (373)
T ss_dssp             EEECCTTSSSCCSS--SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHHTH--HHHHHHHH
T ss_pred             EEeCcCCCccCccc--eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHHHH--HHHHHHHH
Confidence            665    99986 5  46777775 55655443211            1122334555555544444333  33566666


Q ss_pred             HHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCC-----------------
Q 021893          188 HLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHD-----------------  250 (306)
Q Consensus       188 ~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-----------------  250 (306)
                      ++.+++++.|+++....+ .. .......+..+.+..    .+..++.+.|.++||.+++..+                 
T Consensus       255 ~~~~~~~~~l~~~~~~~~-~~-~~~~~~~~~~~~~~~----~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~  328 (373)
T 3frk_A          255 KIAQKYIAGINNPNVIIP-VE-ADYAKHVWYTFVIRS----EKRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTG  328 (373)
T ss_dssp             HHHHHHHHHCCCTTEECC-CC-CTTEECCCSSEEEEE----SSHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTT
T ss_pred             HHHHHHHHHhccCceEec-cC-CCCCceeeEEEEEEe----CCHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCC
Confidence            777777766655421111 00 000112222222221    2467899999999999885421                 


Q ss_pred             ----------CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          251 ----------TIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       251 ----------~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                +.+|++++..+|++|++++++.|+++..
T Consensus       329 ~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~  366 (373)
T 3frk_A          329 NFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKL  366 (373)
T ss_dssp             SSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC-
T ss_pred             CCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhh
Confidence                      6899999999999999999999987765

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.73  E-value=8.3e-17  Score=148.31  Aligned_cols=218  Identities=13%  Similarity=0.077  Sum_probs=143.2

Q ss_pred             CCHHHHHHHH-Hhc-CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccccCCCC
Q 021893           45 GDITALEKIF-KES-GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVR  121 (306)
Q Consensus        45 ~d~~~le~~i-~~~-~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~~~~~~  121 (306)
                      .|+++|+++| +.. ..++.+|+++.+++++|.+.+    +++|.++|+++|+++++|++|+++.. |. ......+...
T Consensus       214 ~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~----l~~I~~la~~~g~~v~vD~A~~~~~~-g~~~~~~~~~~~~  288 (456)
T 2z67_A          214 VPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD----IVEIAKICENYDIPHIINGAYAIQNN-YYLEKLKKAFKYR  288 (456)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC----HHHHHHHHHHHTCCEEEECTTTTTCH-HHHHHHHHHHTSC
T ss_pred             cCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC----HHHHHHHHHHcCCcEEEECcchHHHH-HhhHHHHHhhCCC
Confidence            3899999999 431 136777877888888999988    99999999999999999999975422 11 1111111114


Q ss_pred             CcEE--EecccccCCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHH
Q 021893          122 PDMV--ILGKALGGGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQ  195 (306)
Q Consensus       122 ~d~~--s~sK~~~~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~  195 (306)
                      +|++  +++|.+++++ ++|++++ ++++++.+.+....... .+  ...++.+++..+..   ++..++..++++++++
T Consensus       289 ~D~~~~s~hK~~~~p~-g~G~l~~~~~~~~~~l~~~~~g~~~-~~--~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~  364 (456)
T 2z67_A          289 VDAVVSSSDKNLLTPI-GGGLVYSTDAEFIKEISLSYPGRAS-AT--PVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDE  364 (456)
T ss_dssp             CSEEEEEHHHHHCCCS-SCEEEEESCHHHHHHHHTTSCSCBC-SH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEcCCCCcCCCC-CeEEEEEcCHHHHhhcCcCCCCCCC-CC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6666  5569888888 9999999 57777777543222211 11  13333344444333   4467888899999999


Q ss_pred             HHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCc---eec------------cCCCCEEEEeCCCC
Q 021893          196 HLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGI---LAK------------PTHDTIVRLTPPLS  260 (306)
Q Consensus       196 ~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi---~~~------------~~~~~~lRi~~~~~  260 (306)
                      .|+++....+..+....   .++++.+...  . ...++.+.|.++|+   .+.            ....+++|++++..
T Consensus       365 ~L~~~~~~~g~~v~~~~---~~v~~~~~~~--~-~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~  438 (456)
T 2z67_A          365 LLNDLSKKTGGKFLDVE---SPIASCISVN--S-DPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIG  438 (456)
T ss_dssp             HHHHHHHHSSCCBCCCC---CSSEEEEECS--S-CHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTT
T ss_pred             HHHhcccccCCEecCCC---CeEEEEEecc--c-HHHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcC
Confidence            99887411110111212   4556665211  1 14678999999985   332            22357999999889


Q ss_pred             CCHHHHHHHHHHHHHHH
Q 021893          261 ISSNELQEGSKALHDVL  277 (306)
Q Consensus       261 ~t~~~i~~~~~~l~~~l  277 (306)
                      +|++|+++++++|++++
T Consensus       439 ~t~eeid~~l~~L~~~~  455 (456)
T 2z67_A          439 VRTEDIVNSVSKLEKIL  455 (456)
T ss_dssp             CCHHHHHHHHHHHHTC-
T ss_pred             CCHHHHHHHHHHHHHHh
Confidence            99999999999998654

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.73  E-value=5.1e-16  Score=140.27  Aligned_cols=218  Identities=14%  Similarity=0.166  Sum_probs=141.7

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCc
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d  123 (306)
                      .|+++|++.++++++++++|++++   ++|...+    +++|.++|+++|+++|+||+|+ |+.+.+...  ..+ ..+|
T Consensus       107 ~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~--~~~-~~~~  176 (394)
T 1o69_A          107 IDVDLLKLAIKECEKKPKALILTH---LYGNAAK----MDEIVEICKENDIVLIEDAAEALGSFYKNKAL--GTF-GEFG  176 (394)
T ss_dssp             BCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCC----HHHHHHHHHHTTCEEEEECTTCTTCEETTEET--TSS-SSEE
T ss_pred             cCHHHHHHHHhcccCCceEEEEEC---CCCChhh----HHHHHHHHHHcCCEEEEECcCcccceeCCccc--ccc-cCcE
Confidence            389999999986433578888876   4676666    9999999999999999999998 654444321  111 1467


Q ss_pred             EEEec--ccccCCcccceeeEeC-HHHHhhcCCCCccC-----CC---------CCCHHHHHHHHHHHHHHhhccHHHHH
Q 021893          124 MVILG--KALGGGVIPVSAVLAD-KEVMLCIQPGEHGS-----TF---------GGNPLASAVAIASLDVIRDEKLAERS  186 (306)
Q Consensus       124 ~~s~s--K~~~~G~~~~g~~~~~-~~~~~~~~~~~~~~-----~~---------~~~~~~~~aa~~al~~~~~~~~~~~~  186 (306)
                      +.++|  |.++ |. ++|+++++ +++++.+.......     .+         ..+.+..+++...++.+.  +..++.
T Consensus       177 ~~s~s~~K~l~-~~-~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~--~~~~~~  252 (394)
T 1o69_A          177 VYSYNGNKIIT-TS-GGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLE--QRVLKK  252 (394)
T ss_dssp             EEECCTTSSSC-CS-SCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHH--HHHHHH
T ss_pred             EEEEeCCccCC-CC-CceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHHHHH--HHHHHH
Confidence            88885  6665 55 89999995 78776654311110     01         134455555544454443  256777


Q ss_pred             HHHHHHHHHHHHHHHhhCCCceeeEEEeee-EEEEEEecCC------------------ChhhHHHHHHHHHHCCceecc
Q 021893          187 AHLGEELRQHLFKIQQQFPNYVKEVRGRGL-FNAVEFDKTA------------------LPVSAYDICLKMKERGILAKP  247 (306)
Q Consensus       187 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~-~~~i~~~~~~------------------~~~~~~~~~~~l~~~Gi~~~~  247 (306)
                      +++.+++++.|+++ ....+.. .....+. ++++.++...                  .+.+..++.+.|.++||.+++
T Consensus       253 ~~~~~~l~~~L~~~-~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~  330 (394)
T 1o69_A          253 REIYEWYKEFLGEY-FSFLDEL-ENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRP  330 (394)
T ss_dssp             HHHHHHHHHHHTTT-EECCCCC-TTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBC
T ss_pred             HHHHHHHHHHhccc-ccccCCC-CCCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHHcCCcccc
Confidence            88888888888765 2221000 0001122 3566665210                  013577899999999999887


Q ss_pred             CCC------------------------CEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          248 THD------------------------TIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       248 ~~~------------------------~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +..                        ..+|+..+..+|++|++.+++.|++++.
T Consensus       331 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~  385 (394)
T 1o69_A          331 LWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIK  385 (394)
T ss_dssp             CCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred             cCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHh
Confidence            510                        3455666778999999999999998887

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.72  E-value=1.4e-17  Score=151.51  Aligned_cols=222  Identities=9%  Similarity=0.000  Sum_probs=140.6

Q ss_pred             cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHH--cCCEEEEehhhhcccccccccccc
Q 021893           39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSK--YNILMIADEIQSGLARSGRMLASD  116 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~--~gi~li~De~~~g~~~~g~~~~~~  116 (306)
                      +.+++.+|+++|+++|+   +++++|+++.++|++|.+.+    +++|.++|++  +|+++|+|++|+.. .....+   
T Consensus       149 v~~v~~~d~~~le~ai~---~~tklV~~e~~~NptG~v~d----l~~I~~la~~~~~g~~livD~a~a~~-~~~~p~---  217 (415)
T 2fq6_A          149 TSWFDPLIGADIVKHLQ---PNTKIVFLESPGSITMEVHD----VPAIVAAVRSVVPDAIIMIDNTWAAG-VLFKAL---  217 (415)
T ss_dssp             EEEECTTCGGGGGGGCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHCTTCEEEEECTTTTT-TSSCGG---
T ss_pred             EEEECCCCHHHHHHhhc---cCCcEEEEECCCCCCCEeec----HHHHHHHHHhhcCCCEEEEECCCccc-ccCCcc---
Confidence            35567779999999987   57999999999999999988    9999999999  99999999999732 111111   


Q ss_pred             cCCCCCcEE--EecccccC-CcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893          117 WEEVRPDMV--ILGKALGG-GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL  193 (306)
Q Consensus       117 ~~~~~~d~~--s~sK~~~~-G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l  193 (306)
                        ....|++  |++|.+++ |....|++++++++++.+...........++..+..+..+++.+..  ..++..++.+.+
T Consensus       218 --~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~~G~~~~~~~a~~~~~~l~~l~~--r~~~~~~n~~~l  293 (415)
T 2fq6_A          218 --DFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRTLGV--RLRQHHESSLKV  293 (415)
T ss_dssp             --GGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred             --ccCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhHHHH--HHHHHHHHHHHH
Confidence              2334555  78899984 4314688999888777665322212223355555555556655432  244555666666


Q ss_pred             HHHHHHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec------------c-
Q 021893          194 RQHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK------------P-  247 (306)
Q Consensus       194 ~~~L~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~------------~-  247 (306)
                      ++.|++...    .+|+..         ....+.|.+++|.++..........|...|.-.++.++            | 
T Consensus       294 ~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~  373 (415)
T 2fq6_A          294 AEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILANQPE  373 (415)
T ss_dssp             HHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEECSCCCSSSCEEEEECHH
T ss_pred             HHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhCCcCeEeccCCCCceeEEecCCC
Confidence            666665410    011100         00123677888888631001345555555432222221            1 


Q ss_pred             ------------CCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          248 ------------THDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       248 ------------~~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                                  ..++.||++++..+++++++.+.+.|++
T Consensus       374 ~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~  413 (415)
T 2fq6_A          374 HIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR  413 (415)
T ss_dssp             HHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred             ccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence                        1247999999988888888888877764

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.72  E-value=9e-17  Score=145.95  Aligned_cols=216  Identities=14%  Similarity=0.135  Sum_probs=142.6

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCc
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d  123 (306)
                      .|+++|+++++++  ++++|++++++++  ...+    +++|.++|++||++||+||+|+ |+...+... ... . .+|
T Consensus       156 ~d~~~l~~~i~~~--~~~~v~~~~~~~~--~~~~----l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~-~~~-~-~~d  224 (420)
T 3gbx_A          156 IDYDEMAKLAKEH--KPKMIIGGFSAYS--GVVD----WAKMREIADSIGAYLFVDMAHVAGLIAAGVYP-NPV-P-HAH  224 (420)
T ss_dssp             CCHHHHHHHHHHH--CCSEEEECCTTCC--SCCC----HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSC-CST-T-TSS
T ss_pred             cCHHHHHHHHHhc--CCeEEEEecCccC--CccC----HHHHHHHHHHcCCEEEEECCcchhceecccCC-ccc-c-cCC
Confidence            5899999999864  4778888654443  3555    9999999999999999999986 554344322 111 1 256


Q ss_pred             EE--EecccccCCcccceeeEeCH---HHHhhcCCCCccCCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHH
Q 021893          124 MV--ILGKALGGGVIPVSAVLADK---EVMLCIQPGEHGSTF-GGNPLASAVAIASLDVIRD---EKLAERSAHLGEELR  194 (306)
Q Consensus       124 ~~--s~sK~~~~G~~~~g~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~  194 (306)
                      ++  |+||+++ |. +.|++++++   ++++.+......... ..+...++++..++.....   +++.++++++.++++
T Consensus       225 i~~~s~sK~~~-g~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~  302 (420)
T 3gbx_A          225 VVTTTTHKTLA-GP-RGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMV  302 (420)
T ss_dssp             EEEEESSGGGC-SC-SCEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeecccCCC-CC-CceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHH
Confidence            65  5779997 44 568899887   777666542222222 2334444444445543322   345777888888888


Q ss_pred             HHHHHHHhhCCCcee-eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc-------C---CCCEEEEeCCCC---
Q 021893          195 QHLFKIQQQFPNYVK-EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP-------T---HDTIVRLTPPLS---  260 (306)
Q Consensus       195 ~~L~~~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~-------~---~~~~lRi~~~~~---  260 (306)
                      +.|++.+     ... .....+.++++.+...  ......+.+.|.++||.+.+       +   .+..+|++++..   
T Consensus       303 ~~L~~~g-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~  375 (420)
T 3gbx_A          303 EVFLNRG-----YKVVSGGTENHLFLLDLVDK--NLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRR  375 (420)
T ss_dssp             HHHHHTT-----CEEGGGSCSSSEEEEECGGG--TCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHT
T ss_pred             HHHHhcC-----CeeccCCCCCeEEEEEcCCC--CCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhccc
Confidence            8887732     211 1113566777776531  23567788889899999887       2   345699997644   


Q ss_pred             -CCHHHHHHHHHHHHHHHhhhc
Q 021893          261 -ISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       261 -~t~~~i~~~~~~l~~~l~~~~  281 (306)
                       .++++++.++++|+++++ +.
T Consensus       376 ~~~~~~i~~~~~~l~~~l~-~~  396 (420)
T 3gbx_A          376 GFKEAEVKELAGWMCDVLD-NI  396 (420)
T ss_dssp             TCCHHHHHHHHHHHHHHHH-TT
T ss_pred             CCCHHHHHHHHHHHHHHHh-Cc
Confidence             568999999999999998 54

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.72  E-value=1.9e-17  Score=152.19  Aligned_cols=201  Identities=15%  Similarity=0.049  Sum_probs=136.1

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc-ccccccccccccCCCCCcEEE--ecccccCCc
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG-LARSGRMLASDWEEVRPDMVI--LGKALGGGV  135 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g-~~~~g~~~~~~~~~~~~d~~s--~sK~~~~G~  135 (306)
                      ++++++++++ .+++|.+.+    +++|.++|++||+++|+||+|++ +...+..+  +.....+|+++  ++|.++++.
T Consensus       145 ~~~~~v~~~~-~n~~G~~~~----l~~I~~l~~~~~~~livDea~~~~~~f~~~~~--~~~~~g~Di~~~S~~K~l~~~~  217 (446)
T 2x3l_A          145 DGHKLVVLTY-PNYYGETFN----VEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPD--STLNYQADYVVQSFHKTLPALT  217 (446)
T ss_dssp             --CCEEEEES-SCTTSCCCC----HHHHHHHHHHTTCCEEEECTTCTTTTSTTSCC--CGGGGTCSEEEECHHHHSSSCT
T ss_pred             CCceEEEEEC-CCCCeEecC----HHHHHHHHHhcCCeEEEcchhhhhhccCCCCC--ChHHcCCCEEEECCcccccccc
Confidence            4678888888 555898887    99999999999999999999985 22222222  22223457664  559988777


Q ss_pred             ccceeeEeCHHHHh--hcCCC-CccCCCCCCHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhhCCCcee
Q 021893          136 IPVSAVLADKEVML--CIQPG-EHGSTFGGNPLASAVAIASLDVIRDEK---LAERSAHLGEELRQHLFKIQQQFPNYVK  209 (306)
Q Consensus       136 ~~~g~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~aa~~al~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~  209 (306)
                       ++|++++++++++  .+... ....+.+.+...+++..++++.+...+   +.++.+++.+++++.      .+  .+ 
T Consensus       218 -g~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~------g~--~~-  287 (446)
T 2x3l_A          218 -MGSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK------GF--EM-  287 (446)
T ss_dssp             -TCEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH------TC--EE-
T ss_pred             -ccEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc------CC--EE-
Confidence             8999999877644  22211 112233456666666667777776532   556666666666554      11  11 


Q ss_pred             eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          210 EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       210 ~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      .....+..+++.++    +.+..++.+.|.++||.+...+.+++|++++..++++++ .++++|+++++ .+.
T Consensus       288 ~~~~~~~~l~i~~~----~~~~~~l~~~L~~~GI~v~~~g~~~iRi~~~~~~t~e~i-~l~~aL~~~~~-~~~  354 (446)
T 2x3l_A          288 LQVDDPLKLLIKYE----GFTGHDIQNWFMNAHIYLELADDYQALAILPLWHHDDTY-LFDSLLRKIED-MIL  354 (446)
T ss_dssp             EECSSTTEEEEECT----TSCHHHHHHHHHHTTEEESEECSSCEEEECCCCCTTCCC-CHHHHHHHHHT-CCC
T ss_pred             CcCCCCeEEEEEeC----CcCHHHHHHHHHHCCCEEEecCCCEEEEEeecCCCHHHH-HHHHHHHHHHH-hhc
Confidence            11122345666654    245678999999999999844567999999988899999 99999999998 775

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=99.72  E-value=3.3e-18  Score=154.62  Aligned_cols=247  Identities=14%  Similarity=0.077  Sum_probs=153.6

Q ss_pred             ceEEEEecCCCCcccchhcccCCcc----ccccCCCCCCC-----------cccccCCCHHHHHHHHHhcCCcEEEEEEc
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNE----AIRGFGPLLPG-----------HLKVDFGDITALEKIFKESGDQIAGFLFE   67 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~----~~~~~~~~~~~-----------~~~~~~~d~~~le~~i~~~~~~~~~v~v~   67 (306)
                      ..|++.+|+.++-...+.++..+..    ..-...|.++.           +..++. |.+.++      .+++++|+++
T Consensus        92 ~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~-d~~~l~------~~~~k~v~l~  164 (391)
T 3bwn_A           92 RYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEG-DAWGFD------KKGPYIELVT  164 (391)
T ss_dssp             SEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEE-ESTTCC------CCSCEEEEEE
T ss_pred             CeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecC-CHHHcC------CCCCEEEEEC
Confidence            3688888888887766666544332    22222344433           122222 223332      1468888888


Q ss_pred             cccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccceeeEe-CH
Q 021893           68 PIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLA-DK  145 (306)
Q Consensus        68 ~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~g~~~~-~~  145 (306)
                      .++|++|.+..      +|++.++.+++++|+||+|.+ . ....+. ...+....+.||||.++ +|+ |+||+++ ++
T Consensus       165 ~p~NPtG~~~~------~l~~~~~~~~~~ii~De~y~~-~-~~~~l~-~~~~~~i~~~S~SK~~g~~Gl-RiG~~~~~~~  234 (391)
T 3bwn_A          165 SPNNPDGTIRE------TVVNRPDDDEAKVIHDFAYYW-P-HYTPIT-RRQDHDIMLFTFSKITGHAGS-RIGWALVKDK  234 (391)
T ss_dssp             SSCTTTCCCCC------CCC-----CCCEEEEECTTCS-T-TTSCCC-CCBCCSEEEEEHHHHHSCGGG-CEEEEEECCH
T ss_pred             CCCCCCchhHH------HHHHHhhcCCCEEEEeCCCCC-C-CCCccc-cCCCCeEEEEechhhcCCCcc-ceEEEEecCH
Confidence            88999997752      343322223399999999973 1 111121 12233445669999998 899 9999997 88


Q ss_pred             HHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHh---------h---ccHHHHHHHHHHHHHHHHHHHHhhCCCceee---
Q 021893          146 EVMLCIQPGEHGSTFGGNPLASAVAIASLDVIR---------D---EKLAERSAHLGEELRQHLFKIQQQFPNYVKE---  210 (306)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~---------~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---  210 (306)
                      ++++.+........++.+.+++.++.++++...         +   ++..++++++++.+.+.|++.    ++....   
T Consensus       235 ~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~p~  310 (391)
T 3bwn_A          235 EVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKES----DAFTLPKYP  310 (391)
T ss_dssp             HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTC----SSEECCCCC
T ss_pred             HHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccccCC
Confidence            888877654333346678888888888887642         1   224555566666666666553    111110   


Q ss_pred             ----------EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          211 ----------VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-----HDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       211 ----------~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                                .+..|+++|+.+++      ...+.+.|.++||.+.|+     +.+++|+++.  .+++++++++++|++
T Consensus       311 ~~~~~f~~~~~~~~g~~~~~~~~~------~~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~--~~~e~i~~~~~~L~~  382 (391)
T 3bwn_A          311 EAFCNYFGKSLESYPAFAWLGTKE------ETDLVSELRRHKVMSRAGERCGSDKKHVRVSML--SREDVFNVFLERLAN  382 (391)
T ss_dssp             CEEETTTTEEECCCCSEEEEEESS------SCCHHHHHHHTTEECEEGGGGTCCTTEEEEESC--SCHHHHHHHHHHHHS
T ss_pred             ccccccccccCCCcceEEEecCCc------HHHHHHHHHHCCEEEccCCCCCCCCCEEEEEec--CCHHHHHHHHHHHHH
Confidence                      12345678888763      124566778899999985     2679999954  589999999999987


Q ss_pred             HHh
Q 021893          276 VLE  278 (306)
Q Consensus       276 ~l~  278 (306)
                      +++
T Consensus       383 ~~~  385 (391)
T 3bwn_A          383 MKL  385 (391)
T ss_dssp             CC-
T ss_pred             HHH
Confidence            766

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=99.71  E-value=1.5e-15  Score=142.11  Aligned_cols=224  Identities=14%  Similarity=0.080  Sum_probs=141.3

Q ss_pred             CHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893           46 DITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R  121 (306)
Q Consensus        46 d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~  121 (306)
                      |+++|+++|++.   +.++++|+++.+++++|.+.+    +++|.++|++||+++++|++|+++......+.....++ .
T Consensus       242 d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~----l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~  317 (515)
T 2jis_A          242 VPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP----LEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQR  317 (515)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGG
T ss_pred             CHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC----HHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCcc
Confidence            799999999852   236899999999999998887    99999999999999999999997544332222223344 6


Q ss_pred             CcEEEe--cccccCCcccceeeEeCHH--HHhhc----CCCC-c----------cCCC------CCCHHHHHHHHHHHHH
Q 021893          122 PDMVIL--GKALGGGVIPVSAVLADKE--VMLCI----QPGE-H----------GSTF------GGNPLASAVAIASLDV  176 (306)
Q Consensus       122 ~d~~s~--sK~~~~G~~~~g~~~~~~~--~~~~~----~~~~-~----------~~~~------~~~~~~~~aa~~al~~  176 (306)
                      +|++++  +|.+++++ ++|+++++++  +++.+    .+.. .          ..++      ....+.+.+++.++..
T Consensus       318 aD~v~~s~hK~l~~p~-g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~  396 (515)
T 2jis_A          318 ADSVAWNPHKLLAAGL-QCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGD  396 (515)
T ss_dssp             CSEEEECTTSTTCCCS-CCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHH
T ss_pred             CCEEEECcccccCCCC-CeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhH
Confidence            787766  79998887 8999998765  65541    1111 0          0000      1123444444433322


Q ss_pred             HhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE-ecC--C--Chhh--------HHHHHHHHHHCCc
Q 021893          177 IRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF-DKT--A--LPVS--------AYDICLKMKERGI  243 (306)
Q Consensus       177 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~-~~~--~--~~~~--------~~~~~~~l~~~Gi  243 (306)
                      -.-+++.++..++++++.+.|++.    ++.....+.....+.+.. +..  .  ....        ...+.+.|.++|+
T Consensus       397 ~g~~~~~~~~~~~a~~l~~~L~~~----~g~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~  472 (515)
T 2jis_A          397 QGLERRIDQAFVLARYLVEEMKKR----EGFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGS  472 (515)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTS----TTEEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC----CCEEEeCCCCeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCC
Confidence            112345667777777777777664    112111111122233333 210  0  0011        1236778888897


Q ss_pred             eecc-----CCCCEEEEeC-CCCCCHHHHHHHHHHHHHHHh
Q 021893          244 LAKP-----THDTIVRLTP-PLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       244 ~~~~-----~~~~~lRi~~-~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .+..     ...+++|+++ +..+|++|++.++++|+++++
T Consensus       473 ~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~  513 (515)
T 2jis_A          473 MMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQ  513 (515)
T ss_dssp             CEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred             EEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence            5522     2246899999 788999999999999998876

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.71  E-value=1.3e-16  Score=145.46  Aligned_cols=214  Identities=15%  Similarity=0.171  Sum_probs=134.7

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |+++|++.++   +++++|++++   ++|...+    +++|.++|++||+++|+||+|+ |+.+.+..+  ..++ +..+
T Consensus       127 d~~~l~~~i~---~~~~~v~~~~---~tG~~~~----l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~--~~~~-di~~  193 (424)
T 2po3_A          127 DPDQVAAAVT---PRTSAVVGVH---LWGRPCA----ADQLRKVADEHGLRLYFDAAHALGCAVDGRPA--GSLG-DAEV  193 (424)
T ss_dssp             CHHHHGGGCC---TTEEEEEEEC---GGGCCCC----HHHHHHHHHHTTCEEEEECTTCTTCEETTEET--TSSS-SEEE
T ss_pred             CHHHHHHhhC---cCCcEEEEEC---CCCCcCC----HHHHHHHHHHcCCEEEEECccccCCeECCeec--cccc-CEEE
Confidence            7899988886   4688888754   5676666    9999999999999999999999 665444322  1111 2233


Q ss_pred             EEec--ccccCCcccceeeEeC-HHHHhhcCCCCcc------------CCCCCCHHHHHHHHHHHHHHhhccHHHHHHHH
Q 021893          125 VILG--KALGGGVIPVSAVLAD-KEVMLCIQPGEHG------------STFGGNPLASAVAIASLDVIRDEKLAERSAHL  189 (306)
Q Consensus       125 ~s~s--K~~~~G~~~~g~~~~~-~~~~~~~~~~~~~------------~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~  189 (306)
                      .|+|  |.+++ . ++||++.+ +++++.+......            ..+..+.+..+++...++.+  +++.++.+++
T Consensus       194 ~S~sk~K~l~~-~-~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~~~~~--~~~~~~~~~~  269 (424)
T 2po3_A          194 FSFHATKAVNA-F-EGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTSLDAF--PEVIDRNRRN  269 (424)
T ss_dssp             EECCTTSSSCC-S-SCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred             EeCCCCCCccC-C-CCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence            4666  76666 6 99999998 7877665421110            11123445555444444332  2245555555


Q ss_pred             HHHHHHHHHHHHhhCCCceeeE-E-E-e--eeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCC--------------
Q 021893          190 GEELRQHLFKIQQQFPNYVKEV-R-G-R--GLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHD--------------  250 (306)
Q Consensus       190 ~~~l~~~L~~~~~~~~~~~~~~-~-~-~--g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~--------------  250 (306)
                      .+++++.|+++    ++..... + + .  ..++++.+++...+.+..++.+.|.++||.+.+...              
T Consensus       270 ~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~  345 (424)
T 2po3_A          270 HAAYREHLADL----PGVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPH  345 (424)
T ss_dssp             HHHHHHHTCSC----TTEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCC
T ss_pred             HHHHHHHhccC----CCccccCCCCCCccccEEEEEEECCccchhhHHHHHHHHHHCCCceecccCCccccchhhhhcCC
Confidence            55555555432    1122111 1 1 1  134556555200012467899999999999986311              


Q ss_pred             -----------CEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          251 -----------TIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       251 -----------~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                                 ..||+.++..++++|+++++++|+++++ ..
T Consensus       346 ~~~~~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~-~~  386 (424)
T 2po3_A          346 APLPHTERLAARVLSLPTGTAIGDDDIRRVADLLRLCAT-RG  386 (424)
T ss_dssp             CCCHHHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHH-HH
T ss_pred             CCChhHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHh-hh
Confidence                       1288877789999999999999998886 54

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=99.70  E-value=2.1e-15  Score=140.62  Aligned_cols=225  Identities=14%  Similarity=0.088  Sum_probs=142.1

Q ss_pred             CHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893           46 DITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R  121 (306)
Q Consensus        46 d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~  121 (306)
                      |+++|+++|++.   +.++++|+++.+++++|.+.+    +++|.++|++||+++++|++|+++......+.....++ .
T Consensus       228 d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~----l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~  303 (504)
T 2okj_A          228 IPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP----IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIER  303 (504)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGG
T ss_pred             CHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCccc
Confidence            899999999852   236899999999999998887    99999999999999999999986533222121222233 5


Q ss_pred             CcEEEec--ccccCCcccceeeEeCH-HHHhh-c---CCCCcc-CC----------------CCCCHHHHHHHHHHHHHH
Q 021893          122 PDMVILG--KALGGGVIPVSAVLADK-EVMLC-I---QPGEHG-ST----------------FGGNPLASAVAIASLDVI  177 (306)
Q Consensus       122 ~d~~s~s--K~~~~G~~~~g~~~~~~-~~~~~-~---~~~~~~-~~----------------~~~~~~~~~aa~~al~~~  177 (306)
                      +|+++++  |.+++++ ++|++++++ ++++. +   .+.... ..                .....+.+.+++.++..-
T Consensus       304 ~D~i~~~~hK~~~~p~-~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~  382 (504)
T 2okj_A          304 ANSVTWNPHKMMGVLL-QCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTV  382 (504)
T ss_dssp             CSEEEECTTSTTCCCS-CCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHH
T ss_pred             CCEEEECchhhcCCCc-ceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHH
Confidence            6877665  9998777 999999875 45543 1   111100 00                011345555554444321


Q ss_pred             hhccHHHHHHHHHHHHHHHHHHHHhhCCCceee---EEEeeeEEEEEE-ecC--C---C-------hhhHHHHHHHHHHC
Q 021893          178 RDEKLAERSAHLGEELRQHLFKIQQQFPNYVKE---VRGRGLFNAVEF-DKT--A---L-------PVSAYDICLKMKER  241 (306)
Q Consensus       178 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~~~~g~~~~i~~-~~~--~---~-------~~~~~~~~~~l~~~  241 (306)
                      .-++..++..++++++.+.|++.    ++....   .+..+. +.+.. +..  .   .       .....++.+.|.++
T Consensus       383 g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~p~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  457 (504)
T 2okj_A          383 GFENQINKCLELAEYLYAKIKNR----EEFEMVFNGEPEHTN-VCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMES  457 (504)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTC----TTEEESSSSCCSSSC-EEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcC----CCEEEEecCCCCeEE-EEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhC
Confidence            11334556666777777766653    112111   123333 33433 220  0   0       01145788999999


Q ss_pred             Cce-ecc--C-C-CCEEEEeCC-CCCCHHHHHHHHHHHHHHHhhhc
Q 021893          242 GIL-AKP--T-H-DTIVRLTPP-LSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       242 Gi~-~~~--~-~-~~~lRi~~~-~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      |++ +.+  . + .+++|+++. ..++++|++.++++|+++++ ++
T Consensus       458 G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~-~~  502 (504)
T 2okj_A          458 GTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQ-DL  502 (504)
T ss_dssp             TSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHT-C-
T ss_pred             CcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHH-HH
Confidence            954 332  1 2 258999985 77899999999999999887 54

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.70  E-value=1.7e-16  Score=141.22  Aligned_cols=208  Identities=14%  Similarity=0.070  Sum_probs=143.0

Q ss_pred             CCHHHHHH-HHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCc
Q 021893           45 GDITALEK-IFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        45 ~d~~~le~-~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d  123 (306)
                      .|+++|++ +++   +++++|++++++|++|.+.+         +++++||+++|+||+|+.+...   +....  ++.-
T Consensus       128 ~d~~~l~~~~i~---~~~k~v~~~~~~nptG~~~~---------~i~~~~~~~li~D~a~~~~~~~---~~~~~--~di~  190 (360)
T 1w23_A          128 QSIPDFSEFQLN---ENDAYLHITSNNTIYGTQYQ---------NFPEINHAPLIADMSSDILSRP---LKVNQ--FGMI  190 (360)
T ss_dssp             CSCCCGGGCCCC---TTEEEEEEESEETTTTEECS---------SCCCCCSSCEEEECTTTTTSSC---CCGGG--CSEE
T ss_pred             CCccchHhhccC---CCCCEEEEeCCCCCcceecc---------cccccCCceEEEechhhcCCCC---cCccc--CCEE
Confidence            36777777 664   57999999999999997753         2233899999999999843211   11222  2223


Q ss_pred             EEEecccccCCcccceeeEeCHHHHhhcCCCCc-----------cCC-CCCCHHHHHHHHHHHHHHhhc----cHHHHHH
Q 021893          124 MVILGKALGGGVIPVSAVLADKEVMLCIQPGEH-----------GST-FGGNPLASAVAIASLDVIRDE----KLAERSA  187 (306)
Q Consensus       124 ~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~-----------~~~-~~~~~~~~~aa~~al~~~~~~----~~~~~~~  187 (306)
                      +.++||.++ .. ++||+++++++++.+.+...           ... .+.+..++.++.++++.+.+.    +..++++
T Consensus       191 ~~s~sK~~~-~~-G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~  268 (360)
T 1w23_A          191 YAGAQKNLG-PS-GVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNE  268 (360)
T ss_dssp             EEETTTTTS-CT-TCEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred             EEEcccccC-CC-CcEEEEEcHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            346779987 33 58999999998877765321           111 234666777777788776542    3566677


Q ss_pred             HHHHHHHHHHHHHHhhCCCc-eee-EE--EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCC
Q 021893          188 HLGEELRQHLFKIQQQFPNY-VKE-VR--GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSI  261 (306)
Q Consensus       188 ~~~~~l~~~L~~~~~~~~~~-~~~-~~--~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~  261 (306)
                      ++++++.+.|+++.    +. ... .+  ..+.++++.++.   ..+..++.+.|.++||.+.++.  .+++|++++..+
T Consensus       269 ~~~~~l~~~L~~~~----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~gi~~~~~~~~~~~iRis~~~~~  341 (360)
T 1w23_A          269 EKAKIIYDTIDESN----GFYVGHAEKGSRSLMNVTFNLRN---EELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAV  341 (360)
T ss_dssp             HHHHHHHHHHHTTT----TSSEESSCGGGBCSSEEEEECSS---HHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTS
T ss_pred             HHHHHHHHHHHHcc----CcccccCCchhccCcEEEEEcCC---CccHHHHHHHHHHCCeeeecCCCCCCeEEEEecCCC
Confidence            77777777776542    11 111 02  234578887763   3456788999999999998763  478999998888


Q ss_pred             CHHHHHHHHHHHHHHHh
Q 021893          262 SSNELQEGSKALHDVLE  278 (306)
Q Consensus       262 t~~~i~~~~~~l~~~l~  278 (306)
                      +++++++++++|+++++
T Consensus       342 ~~~~i~~~~~~l~~~~~  358 (360)
T 1w23_A          342 PIDACIALRELMIQFKE  358 (360)
T ss_dssp             CHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHh
Confidence            99999999999998876

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=99.70  E-value=3.4e-15  Score=137.36  Aligned_cols=230  Identities=13%  Similarity=0.048  Sum_probs=147.1

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc------CCEEEEehhhhcccc--ccccccccc
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY------NILMIADEIQSGLAR--SGRMLASDW  117 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~------gi~li~De~~~g~~~--~g~~~~~~~  117 (306)
                      |+++|+++|+   +++++|+++.+++++|.+.+    +++|.++|++|      |+++++|++|+++..  .......+.
T Consensus       176 d~~~l~~~i~---~~t~~v~~~~~~n~tG~~~~----l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~  248 (452)
T 2dgk_A          176 DPKRMIEACD---ENTIGVVPTFGVTYTGNYEF----PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDF  248 (452)
T ss_dssp             CHHHHHHHCC---TTEEEEECBBSCTTTCBBCC----HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST
T ss_pred             CHHHHHHHHh---hCCEEEEEEcCCcCCcccCC----HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhc
Confidence            7999999997   46899999999999999988    99999999996      999999999986532  011111111


Q ss_pred             CCCCCcEEEe--cccccCCcccceeeEeCH-HHH-hhcCC--CCcc-------CCCCCCHHHHHHHHHHHHHHhhc---c
Q 021893          118 EEVRPDMVIL--GKALGGGVIPVSAVLADK-EVM-LCIQP--GEHG-------STFGGNPLASAVAIASLDVIRDE---K  181 (306)
Q Consensus       118 ~~~~~d~~s~--sK~~~~G~~~~g~~~~~~-~~~-~~~~~--~~~~-------~~~~~~~~~~~aa~~al~~~~~~---~  181 (306)
                      .-...|.+++  .|.+.+|+ ++|++++++ +.+ +.+..  ....       ..++.+.....+..++++.+..+   +
T Consensus       249 ~~~~~d~~~~~~hK~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~  327 (452)
T 2dgk_A          249 RLPRVKSISASGHKFGLAPL-GCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTK  327 (452)
T ss_dssp             TSTTEEEEEEETTTTTCCCS-SCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEECcccccCCCC-CeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHH
Confidence            0114565554  49776888 999999864 333 43321  1100       01112222333444455544433   3


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCceeeEE----EeeeEEEEEEecCC-ChhhHHHHHHHHHHCCceec----cC---C
Q 021893          182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVR----GRGLFNAVEFDKTA-LPVSAYDICLKMKERGILAK----PT---H  249 (306)
Q Consensus       182 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~----~~g~~~~i~~~~~~-~~~~~~~~~~~l~~~Gi~~~----~~---~  249 (306)
                      ..++..++++++.+.|++..    +.....+    ....++.+.++... ...+..++.+.|.++|+.+.    |.   +
T Consensus       328 ~~~~~~~~a~~l~~~L~~~~----~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~  403 (452)
T 2dgk_A          328 VQNASYQVAAYLADEIAKLG----PYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATD  403 (452)
T ss_dssp             HHHHHHHHHHHHHHHHHTTS----SEEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCTT
T ss_pred             HHHHHHHHHHHHHHHHHhCC----CeEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHHhcCCeeeeeeCCcccCC
Confidence            45566666666666666541    1222222    24456666665311 01245789999999998654    22   2


Q ss_pred             CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 021893          250 DTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMRKPK  288 (306)
Q Consensus       250 ~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~~~~~~  288 (306)
                      .+++|+++...+|+++++.+++.|+++++ .+.+.+...
T Consensus       404 ~~~lRis~~~~~t~e~id~li~~l~~~~~-~~~~~~~~~  441 (452)
T 2dgk_A          404 IVVMRIMCRRGFEMDFAELLLEDYKASLK-YLSDHPKLQ  441 (452)
T ss_dssp             CEEEEEECCTTCCHHHHHHHHHHHHHHHH-HHHHCGGGT
T ss_pred             eEEEEEEecCCCCHHHHHHHHHHHHHHHH-HHHhCCCCC
Confidence            45899999888899999999999999998 776554333

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.70  E-value=1.3e-16  Score=144.21  Aligned_cols=198  Identities=11%  Similarity=0.091  Sum_probs=138.7

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--EecccccCCcc
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVI  136 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~  136 (306)
                      +++++|++++++|++|.+.+    +++|.++   +|+++|+||+|+.+..   .+...  +  .|++  +++|.++++. 
T Consensus       164 ~~~~~v~~~~~~nptG~~~~----~~~i~~~---~~~~vivD~a~~~~~~---~~~~~--~--~di~~~s~sK~~~~~g-  228 (398)
T 2fyf_A          164 PSVDVIAWAHNETSTGVAVA----VRRPEGS---DDALVVIDATSGAGGL---PVDIA--E--TDAYYFAPQKNFASDG-  228 (398)
T ss_dssp             TTCSEEEEESEETTTTEECC----CCCCTTC---C-CEEEEECTTTTTTS---CCCGG--G--CSEEEECTTSTTCSCS-
T ss_pred             CCCCEEEEeCcCCCcceecc----hHHhhhh---cCCeEEEEeccccCCc---ccCcc--c--CcEEEEecCcccCCCC-
Confidence            56889998899999998877    5555555   8999999999984321   11111  2  4655  5569999665 


Q ss_pred             cceeeEeCHHHHhhcCC----------CC-----------ccCCCCCCHHHHHHHHHHHHHHhhc----cHHHHHHHHHH
Q 021893          137 PVSAVLADKEVMLCIQP----------GE-----------HGSTFGGNPLASAVAIASLDVIRDE----KLAERSAHLGE  191 (306)
Q Consensus       137 ~~g~~~~~~~~~~~~~~----------~~-----------~~~~~~~~~~~~~aa~~al~~~~~~----~~~~~~~~~~~  191 (306)
                      ++||+++++++++.++.          ..           ....++.+..++.++.++++.+.+.    +..++.+++++
T Consensus       229 g~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~  308 (398)
T 2fyf_A          229 GLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQ  308 (398)
T ss_dssp             SEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred             ceEEEEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence            78999999998776521          00           1112345666777777888776543    35667777777


Q ss_pred             HHHHHHHHHHhhCCCceeeE--E--EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCCCCCH
Q 021893          192 ELRQHLFKIQQQFPNYVKEV--R--GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLSISS  263 (306)
Q Consensus       192 ~l~~~L~~~~~~~~~~~~~~--~--~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~~~t~  263 (306)
                      ++.+.|+++.    +.....  +  ..+.++++.+++   +.+..++++.|.++||.+.++    +.+++|++++..+++
T Consensus       309 ~l~~~L~~~~----g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~t~  381 (398)
T 2fyf_A          309 RLYSWAQERP----YTTPFVTDPGLRSQVVGTIDFVD---DVDAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEP  381 (398)
T ss_dssp             HHHHHHHHST----TEEESCCSGGGBCSSEEEEEECT---TSCHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTSCH
T ss_pred             HHHHHHHHcC----CceeccCChhhcCCcEEEEECCC---CCCHHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCCCH
Confidence            7777777641    122111  2  234477887763   346788999999999999864    257999999888899


Q ss_pred             HHHHHHHHHHHHHHh
Q 021893          264 NELQEGSKALHDVLE  278 (306)
Q Consensus       264 ~~i~~~~~~l~~~l~  278 (306)
                      +|+++++++|+++++
T Consensus       382 e~i~~~~~~l~~~l~  396 (398)
T 2fyf_A          382 DDVSALTECVDWVVE  396 (398)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999999887

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.69  E-value=1.9e-16  Score=141.73  Aligned_cols=206  Identities=18%  Similarity=0.189  Sum_probs=138.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |+++|+++++   +++++|++   ++++|...+    +++|.++|++||++||+|++|+ |....+...  ..++   |+
T Consensus       112 d~~~l~~~i~---~~~~~v~~---~~~~G~~~~----~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~--~~~~---di  176 (367)
T 3nyt_A          112 DPQLLEAAIT---PRTKAIIP---VSLYGQCAD----FDAINAIASKYGIPVIEDAAQSFGASYKGKRS--CNLS---TV  176 (367)
T ss_dssp             CGGGTGGGCC---TTEEEECC---BCGGGCCCC----HHHHHHHHHHTTCCBEEECTTTTTCEETTEET--TSSS---SE
T ss_pred             CHHHHHHhcC---cCCcEEEe---eCCccChhh----HHHHHHHHHHcCCEEEEECccccCCeECCeec--cCCC---CE
Confidence            7888998886   57888883   345677777    9999999999999999999997 443333322  2222   66


Q ss_pred             EEec----ccccC-CcccceeeEe-CHHHHhhcCCCCc------------cCCCCCCHHHHHHHHHHHHHHhhccHHHHH
Q 021893          125 VILG----KALGG-GVIPVSAVLA-DKEVMLCIQPGEH------------GSTFGGNPLASAVAIASLDVIRDEKLAERS  186 (306)
Q Consensus       125 ~s~s----K~~~~-G~~~~g~~~~-~~~~~~~~~~~~~------------~~~~~~~~~~~~aa~~al~~~~~~~~~~~~  186 (306)
                      .++|    |.+++ |.  .|+++. ++++++.++....            +.++..+.+.++++...++.+  ++..++.
T Consensus       177 ~~~Sf~~~K~l~~~g~--gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~--~~~~~~~  252 (367)
T 3nyt_A          177 ACTSFFPSAPLGCYGD--GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIF--EEEIALR  252 (367)
T ss_dssp             EEEECCTTSSSCCSSC--CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHTH--HHHHHHH
T ss_pred             EEEECCCCCcCCCcCc--eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHHH--HHHHHHH
Confidence            6554    99987 64  677777 4777665543211            234566778877777777655  3356777


Q ss_pred             HHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----------------
Q 021893          187 AHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----------------  249 (306)
Q Consensus       187 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----------------  249 (306)
                      +++.+++++.|++.....+............+.+.++      +..++.+.|.++||.+++..                 
T Consensus       253 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~  326 (367)
T 3nyt_A          253 QKVAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMD------NRESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKL  326 (367)
T ss_dssp             HHHHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECS------SHHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCC
T ss_pred             HHHHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeC------CHHHHHHHHHHCCCceeccCCCccccChhhhccCCCC
Confidence            8888888888887632221000011111222333222      46789999999999887432                 


Q ss_pred             -------CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          250 -------DTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       250 -------~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                             ...+|+.++..+|++|++++++.|+++
T Consensus       327 ~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~  360 (367)
T 3nyt_A          327 PVGDKAATQVMSLPMHPYLDTASIKIICAALTNL  360 (367)
T ss_dssp             HHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred             hHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence                   257899988999999999999988765

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.69  E-value=1.4e-16  Score=145.45  Aligned_cols=213  Identities=18%  Similarity=0.176  Sum_probs=135.0

Q ss_pred             cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893           39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE  118 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~  118 (306)
                      +..++.+|+++|+++++   +++++|++++++|++|.+.+    +++|.++|+++|+++|+|++|+.    +.......+
T Consensus       149 ~~~v~~~d~~~l~~ai~---~~t~~v~~e~p~NptG~~~d----l~~i~~la~~~g~~livD~a~~~----~~~~~~~~~  217 (430)
T 3ri6_A          149 VRFVDVMDSLAVEHACD---ETTKLLFLETISNPQLQVAD----LEALSKVVHAKGIPLVVDTTMTP----PYLLEAKRL  217 (430)
T ss_dssp             EEEECTTCHHHHHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHTTTCCEEEECTTSC----TTTCCGGGG
T ss_pred             EEEeCCCCHHHHHHhhC---CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcc----cccCChHHc
Confidence            46677789999999997   57999999999999999988    99999999999999999999972    121222234


Q ss_pred             CCCCcEEEecccccC-Ccccce-eeEeC-H-HH------------------HhhcCC-CCccCCCCCCHHHHHHHHHHHH
Q 021893          119 EVRPDMVILGKALGG-GVIPVS-AVLAD-K-EV------------------MLCIQP-GEHGSTFGGNPLASAVAIASLD  175 (306)
Q Consensus       119 ~~~~d~~s~sK~~~~-G~~~~g-~~~~~-~-~~------------------~~~~~~-~~~~~~~~~~~~~~~aa~~al~  175 (306)
                      +.+..+.|++|.++| |. .+| +++.+ + ..                  +...+. .........++..+..+...++
T Consensus       218 g~div~~S~sK~l~g~g~-~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l~  296 (430)
T 3ri6_A          218 GVDIEVLSSTKFISGGGT-SVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGLE  296 (430)
T ss_dssp             TCSEEEEECCCEEETTEE-ECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHH
T ss_pred             CCEEEEECCcccccCCCC-ceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhhh
Confidence            555556688999985 44 444 44422 2 11                  111111 0011122345565555556665


Q ss_pred             HHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE-----------------Eeee-EEEEEEecCCChhhHHHHHHH
Q 021893          176 VIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR-----------------GRGL-FNAVEFDKTALPVSAYDICLK  237 (306)
Q Consensus       176 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-----------------~~g~-~~~i~~~~~~~~~~~~~~~~~  237 (306)
                      .+..  ..++..++...+.+.|++.    | .+..+.                 +.|. +++|.++.   ......|.+.
T Consensus       297 ~l~~--r~~~~~~na~~la~~L~~~----p-~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~---~~~~~~~~~~  366 (430)
T 3ri6_A          297 TMAL--RIERSCQNAQELAHWLLSI----P-QVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELES---KEASYRFMDA  366 (430)
T ss_dssp             HHHH--HHHHHHHHHHHHHHHHTTC----T-TCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS---HHHHHHHHHH
T ss_pred             hHHH--HHHHHHHHHHHHHHHHhCC----C-CccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC---HHHHHHHHHh
Confidence            5533  2445556666666666543    2 222222                 2366 99999873   4566677777


Q ss_pred             HHHCCceeccC---------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          238 MKERGILAKPT---------------------------HDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       238 l~~~Gi~~~~~---------------------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      |.-.++.++++                           .++.||+++.    .|+.+.+++.|++++
T Consensus       367 l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG----~E~~~dl~~dl~~al  429 (430)
T 3ri6_A          367 LKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVG----IEEIEDLKEDILQAL  429 (430)
T ss_dssp             CSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECC----SSCHHHHHHHHHHHH
T ss_pred             CCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHhh
Confidence            76555444321                           3578999953    356677777777765

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=99.67  E-value=4.7e-16  Score=144.27  Aligned_cols=215  Identities=17%  Similarity=0.145  Sum_probs=142.4

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCc
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d  123 (306)
                      .|+++|++++++.  ++++|++ .+++++ .+.+    +++|+++|+++|++|++|++|. |+...|... ....  ..|
T Consensus       180 iD~d~le~~i~~~--~tklIi~-~~sn~~-~~~d----l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~-~p~~--~~d  248 (483)
T 1rv3_A          180 IDYDRLEENARLF--HPKLIIA-GTSCYS-RNLD----YGRLRKIADENGAYLMADMAHISGLVVAGVVP-SPFE--HCH  248 (483)
T ss_dssp             BCHHHHHHHHHHH--CCSEEEE-CCSSCC-SCCC----HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSC-CGGG--TCS
T ss_pred             CCHHHHHHHHhhc--CCcEEEE-eCCcCC-CcCC----HHHHHHHHHHcCCEEEEEccchhcccccCCCC-CCCC--CCc
Confidence            3899999999853  5778888 666666 5666    9999999999999999999987 543333211 1111  245


Q ss_pred             EE--EecccccCCcccceeeEeCHHH---------------HhhcCCCC-ccCCCCCCHHHHHHHHHHHHHHhh---ccH
Q 021893          124 MV--ILGKALGGGVIPVSAVLADKEV---------------MLCIQPGE-HGSTFGGNPLASAVAIASLDVIRD---EKL  182 (306)
Q Consensus       124 ~~--s~sK~~~~G~~~~g~~~~~~~~---------------~~~~~~~~-~~~~~~~~~~~~~aa~~al~~~~~---~~~  182 (306)
                      ++  |++|+++ |+ +.|++++++++               .+.+.... .....+.+...+++..++++.+.+   +++
T Consensus       249 iv~~s~~K~l~-Gp-rgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~  326 (483)
T 1rv3_A          249 VVTTTTHKTLR-GC-RAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEY  326 (483)
T ss_dssp             EEEEESSGGGC-CC-SCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHH
T ss_pred             EEEecCcccCC-CC-CceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHH
Confidence            55  6669995 55 77999987642               22221100 111222344455555667776643   446


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCceeeEEE-eeeEEEEEEecCCChhhHHHHHHHHHHCCceec----cC-----CCCE
Q 021893          183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRG-RGLFNAVEFDKTALPVSAYDICLKMKERGILAK----PT-----HDTI  252 (306)
Q Consensus       183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~-----~~~~  252 (306)
                      .+++.++++++.+.|++.+     .....++ ...+.++.+...  +.+..++.+.|.+.||.+.    |+     +++.
T Consensus       327 ~~~~~~~~~~l~~~L~~~g-----~~~~~~~~~~~~~~v~~~~~--g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~  399 (483)
T 1rv3_A          327 QRQVVANCRALSAALVELG-----YKIVTGGSDNHLILVDLRSK--GTDGGRAEKVLEACSIACNKNTCPGDKSALRPSG  399 (483)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-----CEEGGGSCSSSEEEEEGGGG--TCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCE
T ss_pred             HHHHHHHHHHHHHHHHhcC-----CEeccCCCCCceEEEeccCC--CCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCce
Confidence            7778888888888887752     1111122 224566666531  2356778888889999998    64     3578


Q ss_pred             EEEeCCCCCC----HHHHHHHHHHHHHHHhhh
Q 021893          253 VRLTPPLSIS----SNELQEGSKALHDVLELD  280 (306)
Q Consensus       253 lRi~~~~~~t----~~~i~~~~~~l~~~l~~~  280 (306)
                      +|++++..++    ++|+++++++|+++++ .
T Consensus       400 iRis~~~~~t~g~~~edi~~~~~~l~~~l~-~  430 (483)
T 1rv3_A          400 LRLGTPALTSRGLLEKDFQKVAHFIHRGIE-L  430 (483)
T ss_dssp             EEEECHHHHHTTCCHHHHHHHHHHHHHHHH-H
T ss_pred             EEeecCCcccCCCCHHHHHHHHHHHHHHHH-h
Confidence            9999876556    9999999999999988 5

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.67  E-value=3.3e-15  Score=139.18  Aligned_cols=229  Identities=14%  Similarity=0.046  Sum_probs=148.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc------CCEEEEehhhhcccc--ccccccccc
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY------NILMIADEIQSGLAR--SGRMLASDW  117 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~------gi~li~De~~~g~~~--~g~~~~~~~  117 (306)
                      |+++|+++|+   +++++|+++.+++++|.+.+    +++|.++|+++      |+++++|++|+++..  .......+.
T Consensus       191 d~~~l~~~i~---~~t~~v~~~~~~n~tG~~~~----l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~  263 (502)
T 3hbx_A          191 DPQQAVDMVD---ENTICVAAILGSTLNGEFED----VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDF  263 (502)
T ss_dssp             CHHHHHHHCC---TTEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST
T ss_pred             CHHHHHHHHh---hCCEEEEEecCCCCCCcccC----HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCccccccc
Confidence            7999999988   46889999999999999988    99999999999      999999999986531  011111111


Q ss_pred             CCCCCcEEE--ecccccCCcccceeeEeC-HHHHh-hcCC--CCcc-------CCCCCCHHHHHHHHHHHHHHhhc---c
Q 021893          118 EEVRPDMVI--LGKALGGGVIPVSAVLAD-KEVML-CIQP--GEHG-------STFGGNPLASAVAIASLDVIRDE---K  181 (306)
Q Consensus       118 ~~~~~d~~s--~sK~~~~G~~~~g~~~~~-~~~~~-~~~~--~~~~-------~~~~~~~~~~~aa~~al~~~~~~---~  181 (306)
                      .....|.++  ..|.+.++. ++|+++.+ ++.+. .+..  ....       ..++.+.....+..++++.+..+   +
T Consensus       264 ~~~~~D~v~~s~hK~l~~p~-g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~  342 (502)
T 3hbx_A          264 RLPLVKSINVSGHKYGLVYA-GIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRN  342 (502)
T ss_dssp             TSTTEEEEEEETTTTTCCCS-SCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCceEEEECcccccCCCC-CeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence            112456554  448887887 89987775 44432 2211  0000       01222233445555566655443   3


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc----C---CCCEE
Q 021893          182 LAERSAHLGEELRQHLFKIQQQFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP----T---HDTIV  253 (306)
Q Consensus       182 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~---~~~~l  253 (306)
                      ..++..++.+++++.|+++.    +...... ....++.+.++... ..+..++.+.|.++|+++..    .   +..++
T Consensus       343 ~~~~~~~~a~~l~~~L~~~~----~~~~~~~~~~~~~v~f~~~~~~-~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~l  417 (502)
T 3hbx_A          343 VMENCRENMIVLREGLEKTE----RFNIVSKDEGVPLVAFSLKDSS-CHTEFEISDMLRRYGWIVPAYTMPPNAQHITVL  417 (502)
T ss_dssp             HHHHHHHHHHHHHHHHHTTT----CEEECSCSSSSSEEEEEESSCS-SCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEE
T ss_pred             HHHHHHHHHHHHHHHHHhCC----CEEEEeCCCCceEEEEEecCCC-cCCHHHHHHHHHhCCcEEeeccCCcccCCceEE
Confidence            45666677777777777652    1111111 24456677665321 24566899999999998652    1   24689


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHhhhcCCCCCCC
Q 021893          254 RLTPPLSISSNELQEGSKALHDVLELDLPKMRKPK  288 (306)
Q Consensus       254 Ri~~~~~~t~~~i~~~~~~l~~~l~~~~~~~~~~~  288 (306)
                      |++++..+++++++.+++.|+++++ .+.+.....
T Consensus       418 Risv~~~~t~edid~li~~L~~~l~-~l~~~~~~~  451 (502)
T 3hbx_A          418 RVVIREDFSRTLAERLVIDIEKVMR-ELDELPSRV  451 (502)
T ss_dssp             EEECCTTCCHHHHHHHHHHHHHHHH-HHHTCC---
T ss_pred             EEEeCCCCCHHHHHHHHHHHHHHHH-HHHhCcccc
Confidence            9999999999999999999999998 876654443

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.65  E-value=3.3e-15  Score=133.22  Aligned_cols=199  Identities=10%  Similarity=0.028  Sum_probs=137.3

Q ss_pred             CcEEEEEEccccCCCCcc-cCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCccc
Q 021893           59 DQIAGFLFEPIQGEAGVI-IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIP  137 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~-~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~  137 (306)
                      +++++|++++++|++|.. .+    +++|      +|+++++|++|+.+.   ..+...  ..+.-+.|++|.++ .. +
T Consensus       141 ~~t~~v~~~~~~n~tG~~~~~----l~~i------~~~~vivD~a~~~~~---~~~~~~--~~d~~~~s~~K~~g-~~-G  203 (362)
T 2c0r_A          141 DNAAYLHLTSNETIEGAQFKA----FPDT------GSVPLIGDMSSDILS---RPFDLN--QFGLVYAGAQKNLG-PS-G  203 (362)
T ss_dssp             TTEEEEEEESEETTTTEECSS----CCCC------TTSCEEEECTTTTTS---SCCCGG--GCSEEEEETTTTTC-CS-S
T ss_pred             CCcCEEEEeCCcCccceeccc----cccc------CCCEEEEEChhhccC---Cccchh--HCcEEEEecccccc-Cc-C
Confidence            579999999999999985 43    5555      899999999997321   111122  22223447889996 33 5


Q ss_pred             ceeeEeCHHHHhhcCCCC------------ccCCCCCCHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHHHHHHHH
Q 021893          138 VSAVLADKEVMLCIQPGE------------HGSTFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQ  201 (306)
Q Consensus       138 ~g~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~aa~~al~~~~~----~~~~~~~~~~~~~l~~~L~~~~  201 (306)
                      +||+++++++++.+.+..            ....++.+...+.++.++++.+.+    ++..++++++++++++.|+++.
T Consensus       204 ~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  283 (362)
T 2c0r_A          204 VTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSG  283 (362)
T ss_dssp             CEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred             cEEEEEcHHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            789999999887775421            122346677888888899987654    3456777777777777777652


Q ss_pred             hhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          202 QQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       202 ~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ..+. ..... ...+.++++.++.   ..+..++++.|.++||.+.++.  .+++|+++...+++++++++++.|+++++
T Consensus       284 ~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~~~gi~~~~g~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~~  359 (362)
T 2c0r_A          284 GFYR-GCVDVDSRSDMNITFRLAS---EELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKR  359 (362)
T ss_dssp             TSSE-ESSCGGGBCSSEEEEECSC---HHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             Cccc-cCCChHHcCCcEEEEEcCC---cchHHHHHHHHHHCCCeeccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence            0000 00000 1234556666653   3567889999999999887653  46799998888899999999999998876

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=99.64  E-value=1.7e-14  Score=133.76  Aligned_cols=225  Identities=9%  Similarity=0.035  Sum_probs=141.1

Q ss_pred             CHHHHHHHHHhcC---CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893           46 DITALEKIFKESG---DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R  121 (306)
Q Consensus        46 d~~~le~~i~~~~---~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~  121 (306)
                      |+++||++|+++.   ..+.+|+++..++++|.+.+    +++|.++|++||+++++|++|++.......+.....++ .
T Consensus       224 d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~----l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~  299 (481)
T 4e1o_A          224 RGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDC----LSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEY  299 (481)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGG
T ss_pred             CHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCC----HHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCccc
Confidence            8999999998631   23777888888888998877    99999999999999999999986422222111111232 3


Q ss_pred             CcEEEe--cccccCCcccceeeEeCH-HHHh-hcCCCC----c---cCC-----C---CCCHHHHHHHHHHHHHHhh---
Q 021893          122 PDMVIL--GKALGGGVIPVSAVLADK-EVML-CIQPGE----H---GST-----F---GGNPLASAVAIASLDVIRD---  179 (306)
Q Consensus       122 ~d~~s~--sK~~~~G~~~~g~~~~~~-~~~~-~~~~~~----~---~~~-----~---~~~~~~~~aa~~al~~~~~---  179 (306)
                      .|.+++  +|++++.+ .+|+++.++ .... .+....    .   ...     +   .+.........++++.+..   
T Consensus       300 aDsi~~~~hK~l~~p~-g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~  378 (481)
T 4e1o_A          300 ADSFTFNPSKWMMVHF-DCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNL  378 (481)
T ss_dssp             CSEEEECHHHHSSCCS-SCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEChHHhcCCCC-ceEEEEEeCHHHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHH
Confidence            477655  59999777 788777754 4332 221110    0   000     0   0101122233344444433   


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCc-eecc---CCCCEEEE
Q 021893          180 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGI-LAKP---THDTIVRL  255 (306)
Q Consensus       180 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi-~~~~---~~~~~lRi  255 (306)
                      ++..++..++.+++++.|++..    +.....+....++++.+..  ......++.+.|.++|+ ++.+   .+..++|+
T Consensus       379 ~~~~~~~~~~a~~l~~~L~~~~----g~~~~~~~~~~~v~f~~~~--~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~  452 (481)
T 4e1o_A          379 QAHVRHGTEMAKYFESLVRNDP----SFEIPAKRHLGLVVFRLKG--PNSLTENVLKEIAKAGRLFLIPATIQDKLIIRF  452 (481)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCT----TEECCSCCCSSEEEEEESS--CHHHHHHHHHHHHHHCSSBCEEEEETTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhcCC----CeEEecCCceeEEEEEeCC--chHHHHHHHHHHHhCCeEEEEeeEECCEEEEEE
Confidence            3356667777777777776641    1222222344556666643  13456789999999984 4443   34568999


Q ss_pred             eCCC-CCCHHHHHHHHHHHHHHHhhhcC
Q 021893          256 TPPL-SISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       256 ~~~~-~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      ++.. .++++||+.++++|+++++ ++.
T Consensus       453 ~~~~~~tt~~di~~~~~~i~~~~~-~l~  479 (481)
T 4e1o_A          453 TVTSQFTTRDDILRDWNLIRDAAT-LIL  479 (481)
T ss_dssp             ECCCTTCCHHHHHHHHHHHHHHHH-HHH
T ss_pred             EeCCCCCCHHHHHHHHHHHHHHHH-HHh
Confidence            9654 4589999999999999988 653

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.64  E-value=2.2e-15  Score=137.08  Aligned_cols=214  Identities=14%  Similarity=0.129  Sum_probs=133.7

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc-ccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA-RSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~-~~g~~~~~~~~~~~~d~  124 (306)
                      |+++|++.++   +++++|++++   ++|...+    +++|.++|++||+++|+||+|+.+. ..+..+  ..++ ..++
T Consensus       119 d~~~l~~~i~---~~~~~v~~~~---~~G~~~~----~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~-~~~~  185 (418)
T 2c81_A          119 DPQLIKSAIT---DKTKAIIPVH---LFGSMAN----MDEINEIAQEHNLFVIEDCAQSHGSVWNNQRA--GTIG-DIGA  185 (418)
T ss_dssp             CHHHHGGGCC---TTEEEECCBC---CTTCCCC----HHHHHHHHHHTTCEEEEECTTCTTCEETTEET--TSSS-SEEE
T ss_pred             CHHHHHHhhC---CCCeEEEEeC---CcCCccc----HHHHHHHHHHCCCEEEEECcccccCccCCEec--cccc-ceEE
Confidence            7899998887   4688888754   5777766    9999999999999999999998553 223221  1111 2456


Q ss_pred             EEe--cccccCCcccceeeEeC-HHHHhhcCCCCccC------------CCC--------------CCHHHHHHHHHHHH
Q 021893          125 VIL--GKALGGGVIPVSAVLAD-KEVMLCIQPGEHGS------------TFG--------------GNPLASAVAIASLD  175 (306)
Q Consensus       125 ~s~--sK~~~~G~~~~g~~~~~-~~~~~~~~~~~~~~------------~~~--------------~~~~~~~aa~~al~  175 (306)
                      .||  +|.+++|  ++|+++.+ +++++.+.......            .+.              .+.+..+.....++
T Consensus       186 ~s~s~~K~~~~g--~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~  263 (418)
T 2c81_A          186 FSCQQGKVLTAG--EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQ  263 (418)
T ss_dssp             EECCTTSSSCSS--SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHT
T ss_pred             EeccCCcccCCC--CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHHHHH
Confidence            677  8999874  88999884 77766543210000            011              12222222222232


Q ss_pred             HHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee------eEEEEEEecC-CChhhHHHHHHHHHHC-Cce---
Q 021893          176 VIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG------LFNAVEFDKT-ALPVSAYDICLKMKER-GIL---  244 (306)
Q Consensus       176 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g------~~~~i~~~~~-~~~~~~~~~~~~l~~~-Gi~---  244 (306)
                      .+  ++..++.+++.+++++.|+++    ++........+      .++.+.+++. ..+.+..++.+.|.++ ||.   
T Consensus       264 ~~--~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~  337 (418)
T 2c81_A          264 EL--DDKNAIREKNAMFLNDALSKI----DGIKVMKRPPQVSRQTYYGYVFRFDPVKFGGLNADQFCEILREKLNMGTFY  337 (418)
T ss_dssp             TH--HHHHHHHHHHHHHHHHHHTTS----TTEEECCCCTTEEECCCSEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTT
T ss_pred             HH--HHHHHHHHHHHHHHHHHhccC----CCcccCCCCCCCcccccEEEEEEEccccccccCHHHHHHHHHHcCCCCccc
Confidence            22  234555556666666666543    21221111111      1333555420 0023577899999999 999   


Q ss_pred             eccCC----------------------------------------CCEEEEeCCCCC-CHHHHHHHHHHHHHHHhhhc
Q 021893          245 AKPTH----------------------------------------DTIVRLTPPLSI-SSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       245 ~~~~~----------------------------------------~~~lRi~~~~~~-t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ++++.                                        .+.||++++..+ |++|++.+++.|+++++ ++
T Consensus       338 v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~-~~  414 (418)
T 2c81_A          338 LHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELAR-KF  414 (418)
T ss_dssp             EECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHH-TT
T ss_pred             ccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHH-hh
Confidence            76531                                        148999999899 99999999999999988 64

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=99.63  E-value=2.8e-16  Score=143.55  Aligned_cols=251  Identities=12%  Similarity=0.060  Sum_probs=157.9

Q ss_pred             ceEEEEecCCCCcccchhcc--------cCCccccccCCCCCCCc---------ccccC-CCHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISM--------SCDNEAIRGFGPLLPGH---------LKVDF-GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~--------~~~~~~~~~~~~~~~~~---------~~~~~-~d~~~le~~i~~~~~~~~~v   64 (306)
                      ..|++..|+.++....+.++        ..+....-...|.++..         ..+++ .|++.|++.++   ++++++
T Consensus       124 ~~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~~l~~~~~---~~~k~v  200 (427)
T 2hox_A          124 RYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVWAGNAANYVNVSN---PEQYIE  200 (427)
T ss_dssp             CEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEEEEEGGGGTTCSC---GGGEEE
T ss_pred             CEEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeeeecCCHHHHHHhhc---CCceEE
Confidence            46888889888877777666        33332222333444331         11111 26778877665   367888


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccceeeEe
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLA  143 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~g~~~~  143 (306)
                      +++.++|++|.+.+  +.+       +  ++..+.|+++-+  ......... .+....+.||||.++ +|+ |+||+++
T Consensus       201 ~l~~p~NPtG~~~~--~~l-------~--~~~~i~d~~~~~--~~~s~~~~~-~~~~i~~~S~SK~~g~~G~-RiG~~~~  265 (427)
T 2hox_A          201 MVTSPNNPEGLLRH--AVI-------K--GCKSIYDMVYYW--PHYTPIKYK-ADEDILLFTMSKFTGHSGS-RFGWALI  265 (427)
T ss_dssp             EEESSCTTTCCCCC--CSS-------T--TCEEEEECTTCS--TTTSCCCSC-BCCSEEEEEHHHHTSCGGG-CCEEEEE
T ss_pred             EEcCCCCCcccccH--HHH-------c--CCCEEEeecccC--CCCCccccC-CCceEEEEeChhcCCCCCc-eEEEEEE
Confidence            88888999997764  432       2  567888887742  110111111 233344559999998 899 9999999


Q ss_pred             -CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---------cc----HHHHHHHHHHHHHHHHHHH-HhhC----
Q 021893          144 -DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---------EK----LAERSAHLGEELRQHLFKI-QQQF----  204 (306)
Q Consensus       144 -~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---------~~----~~~~~~~~~~~l~~~L~~~-~~~~----  204 (306)
                       ++++++.+........+..+.+.+.++..+++...+         ++    ..++++++.+.+.+.|++. ....    
T Consensus       266 ~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~  345 (427)
T 2hox_A          266 KDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELP  345 (427)
T ss_dssp             CCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCC
T ss_pred             CCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccc
Confidence             588888877644444456678888887777765321         12    2345555555555555543 1010    


Q ss_pred             -CC----ceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC-----CCCEEEEeCCCCCCHHHHHHHHHHH
Q 021893          205 -PN----YVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT-----HDTIVRLTPPLSISSNELQEGSKAL  273 (306)
Q Consensus       205 -~~----~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~-----~~~~lRi~~~~~~t~~~i~~~~~~l  273 (306)
                       +.    .....+..|+++|+.++.     +..++++.|+ ++||.+.|+     +++++|+++.  .+++++++++++|
T Consensus       346 ~~~~~~~~~~~~p~~g~f~~~~~~~-----~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~--~~~e~l~~~l~~l  418 (427)
T 2hox_A          346 QSEYCNYFRRMRPPSPSYAWVKCEW-----EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLI--KTQDDFDQLMYYL  418 (427)
T ss_dssp             SCEEETTTTEEECCCCSEEEEEECS-----GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECS--SCHHHHHHHHHHH
T ss_pred             cccccccccccCCCCceEEEEECCC-----cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEec--CCHHHHHHHHHHH
Confidence             00    001233458888988863     2345777775 789999875     3689999954  5899999999999


Q ss_pred             HHHHh
Q 021893          274 HDVLE  278 (306)
Q Consensus       274 ~~~l~  278 (306)
                      ++++.
T Consensus       419 ~~~~~  423 (427)
T 2hox_A          419 KDMVK  423 (427)
T ss_dssp             HHHHT
T ss_pred             HHHHh
Confidence            99887

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.63  E-value=4e-15  Score=135.84  Aligned_cols=224  Identities=11%  Similarity=0.043  Sum_probs=142.8

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccC-----CCHHHHHHHHHhcCCcEEEEEEcc-ccCCCCc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-----GDITALEKIFKESGDQIAGFLFEP-IQGEAGV   75 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~~~~~~~~~v~v~~-~~~~~G~   75 (306)
                      +.+||+..+..|+.+.....++++  ....+......+..++.     .|+++|+++++   +++++|++++ ++|++|.
T Consensus       107 Gd~Vl~~~~~~y~~~~~~~~l~g~--~~~~~~~~G~~~~~v~~~~~~~~d~e~l~~~l~---~~tk~V~i~~sp~np~~~  181 (431)
T 3ht4_A          107 GDELLYITGKPYDTLEEIVGVRGK--GVGSFKEYNIGYNAVPLTEGGLVDFEAVAAAIH---SNTKMIGIQRSKGYATRP  181 (431)
T ss_dssp             TCEEEECSSSCCTTHHHHTTSSSC--SSSCSGGGTCEEEECCBCTTSSBCHHHHHHHCC---TTEEEEEEECSCTTSSSC
T ss_pred             CCEEEEeCCCCchhHHHHHhhccc--ccchHHHcCCEEEEeCCCCCCCcCHHHHHhhcC---CCCeEEEEECCCCCCCCC
Confidence            357777776667776665555442  12222222233455555     38999999997   5799999995 5656653


Q ss_pred             ccCChhHHHHHHHHHHH--cCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCC--cccceeeEeCHHHHhhc
Q 021893           76 IIPPDGYLKAVRDLCSK--YNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGG--VIPVSAVLADKEVMLCI  151 (306)
Q Consensus        76 ~~~~~~~l~~i~~l~~~--~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G--~~~~g~~~~~~~~~~~~  151 (306)
                       ..+.+.+++|.++|++  +|+++|+||+|+.+.......   .++.+..+.|++|.++||  . +.|++++++++++.+
T Consensus       182 -~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~---~~g~Di~~~S~sK~lgg~~~~-~GG~v~~~~~li~~l  256 (431)
T 3ht4_A          182 -SFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC---HVGADLMAGSLIKNPGGGIVK-TGGYIVGKEQYVEAC  256 (431)
T ss_dssp             -CCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG---GTTCSEEEEETTSGGGTTTCS-SCEEEEECHHHHHHH
T ss_pred             -cCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcc---ccCCeEEEcCccccCCCCCCC-ceEEEEecHHHHHHH
Confidence             4577889999999999  999999999998654333322   224444555899999864  4 558999999988876


Q ss_pred             CCC----CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhC-CCceeeEEEeeeEEEEEEecCC
Q 021893          152 QPG----EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQF-PNYVKEVRGRGLFNAVEFDKTA  226 (306)
Q Consensus       152 ~~~----~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~g~~~~i~~~~~~  226 (306)
                      +..    ........+.....++...++.+  ....++..++.+.+++.|++++... | . ...+..+.++.+.+.+  
T Consensus       257 ~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~a~~l~~~L~~~g~~v~p-~-~~~~~~~li~~i~l~~--  330 (431)
T 3ht4_A          257 AYRLTSPGIGAEAGASLYSLQEMYQGFFLA--PHVAGQALKGAIFTAAFLEKLGMNTSP-A-WNAPRTDLIQSVQFDD--  330 (431)
T ss_dssp             HHHHSCTTTTTSCSCCCSCSHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCCEES-C-TTSCCSSSCCEEECCC--
T ss_pred             HHHhccCCcccccCccHHHHHHHHhHhhhH--HHHHHHHHHHHHHHHHHHHhCcCEecC-C-CCCCCccEEEEEEeCC--
Confidence            531    11111111111122344444443  2346778888889999998875321 1 0 1223445577887764  


Q ss_pred             ChhhHHHHHHHHHHCC
Q 021893          227 LPVSAYDICLKMKERG  242 (306)
Q Consensus       227 ~~~~~~~~~~~l~~~G  242 (306)
                       .....++++.|.+..
T Consensus       331 -~~~~~~~~~~l~~~~  345 (431)
T 3ht4_A          331 -KDRMIAFCQAIQYAS  345 (431)
T ss_dssp             -HHHHHHHHHHHHHTS
T ss_pred             -HHHHHHHHHHHHhcC
Confidence             456778999999873

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=99.62  E-value=4.2e-14  Score=131.99  Aligned_cols=227  Identities=16%  Similarity=0.094  Sum_probs=138.2

Q ss_pred             CHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893           46 DITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R  121 (306)
Q Consensus        46 d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~  121 (306)
                      |+++||++|++.   +..+++|+++.+++++|.+.+    |++|.++|++||+++++|++|++.......+.....++ .
T Consensus       231 d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~----l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~  306 (511)
T 3vp6_A          231 IPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP----IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIER  306 (511)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGG
T ss_pred             CHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc----HHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCcc
Confidence            899999999853   233899999999999998877    99999999999999999999985322211111112222 3


Q ss_pred             CcEEE--ecccccCCcccceeeEeC-HHHHhhc-CC---CCcc-C----------CC---CCCHHHHHHHHHHHHHHhh-
Q 021893          122 PDMVI--LGKALGGGVIPVSAVLAD-KEVMLCI-QP---GEHG-S----------TF---GGNPLASAVAIASLDVIRD-  179 (306)
Q Consensus       122 ~d~~s--~sK~~~~G~~~~g~~~~~-~~~~~~~-~~---~~~~-~----------~~---~~~~~~~~aa~~al~~~~~-  179 (306)
                      .|.++  .+|++++.+ .+|+++.+ +.++..+ ..   .... .          .+   .+.......+..+++.+.. 
T Consensus       307 aDsv~~~~hK~l~~p~-g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~  385 (511)
T 3vp6_A          307 ANSVTWNPHKMMGVLL-QCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTV  385 (511)
T ss_dssp             CSEEEECTTSTTCCCS-CCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHH
T ss_pred             CCEEEECcccccCCCc-CeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHH
Confidence            46664  459998777 88888775 4444432 11   0000 0          00   0111122333344444433 


Q ss_pred             --ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE--EEeeeEEEEEEecCCC-------------hhhHHHHHHHHHHCC
Q 021893          180 --EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV--RGRGLFNAVEFDKTAL-------------PVSAYDICLKMKERG  242 (306)
Q Consensus       180 --~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~--~~~g~~~~i~~~~~~~-------------~~~~~~~~~~l~~~G  242 (306)
                        ++..++..++.+++++.|++.    |+.....  .....++.+.+.+...             .....++.+.|+++|
T Consensus       386 gl~~~~~~~~~~a~~l~~~L~~~----pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G  461 (511)
T 3vp6_A          386 GFENQINKCLELAEYLYAKIKNR----EEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESG  461 (511)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSC----TTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcC----CCEEEEecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcC
Confidence              345667777778888777764    1122111  1233334444322110             011346899999998


Q ss_pred             ceecc-----CCCCEEEEeC-CCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          243 ILAKP-----THDTIVRLTP-PLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       243 i~~~~-----~~~~~lRi~~-~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +++..     .+.+++|+++ +..++.+||+.+++.|++.-+ .+-
T Consensus       462 ~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~-~~~  506 (511)
T 3vp6_A          462 TTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQ-DLH  506 (511)
T ss_dssp             SCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC----
T ss_pred             CEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHH-hhh
Confidence            65432     1235799998 678899999999999998877 553

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=99.62  E-value=2.4e-14  Score=132.85  Aligned_cols=223  Identities=10%  Similarity=0.015  Sum_probs=139.1

Q ss_pred             CHHHHHHHHHhcC---CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893           46 DITALEKIFKESG---DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R  121 (306)
Q Consensus        46 d~~~le~~i~~~~---~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~  121 (306)
                      |+++|+++|+++.   ..+.+|+++.+++++|.+.+    +++|.++|++||+++++|++|+++......+.....++ .
T Consensus       218 d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~----l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~  293 (486)
T 1js3_A          218 RASALQEALERDKAAGLIPFFVVATLGTTSCCSFDN----LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEF  293 (486)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGG
T ss_pred             CHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCC----HHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccc
Confidence            8999999998531   12357888888889998877    99999999999999999999986422111111101121 3


Q ss_pred             CcEEEe--cccccCCcccceeeEeCHH-H-HhhcCCC---Ccc-----------------CCCCCCHHHHHHHHHHHHHH
Q 021893          122 PDMVIL--GKALGGGVIPVSAVLADKE-V-MLCIQPG---EHG-----------------STFGGNPLASAVAIASLDVI  177 (306)
Q Consensus       122 ~d~~s~--sK~~~~G~~~~g~~~~~~~-~-~~~~~~~---~~~-----------------~~~~~~~~~~~aa~~al~~~  177 (306)
                      .|.+++  +|.+++.+ ++|+++.+++ . .+.+...   ...                 .+.....+.+   .++++.+
T Consensus       294 adsi~~~~hK~~~~p~-~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~---~~al~~~  369 (486)
T 1js3_A          294 ADSFNFNPHKWLLVNF-DCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKM---WFVFRMY  369 (486)
T ss_dssp             CSEEEECHHHHSSCCS-SCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHH---HHHHHHH
T ss_pred             cCeeEEchhhhcCCCc-ceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHH---HHHHHHH
Confidence            466654  59998777 9999988644 2 3444211   000                 0001123333   3344433


Q ss_pred             hh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec-c---CCC
Q 021893          178 RD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK-P---THD  250 (306)
Q Consensus       178 ~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~-~---~~~  250 (306)
                      ..   ++..++..++.+++.+.|++.    ++.....+..+.++.+.+..  ......++.+.|.++|+.+. +   .+.
T Consensus       370 g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~--~~~~~~~l~~~L~~~g~~~~~~~~~~~~  443 (486)
T 1js3_A          370 GVKGLQAYIRKHVQLSHEFEAFVLQD----PRFEVCAEVTLGLVCFRLKG--SDGLNEALLERINSARKIHLVPCRLRGQ  443 (486)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHC----TTEEECSCCCSSEEEEEESS--CHHHHHHHHHHHHHHTSCBCEEEEETTE
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEeCCCceeEEEEEecC--hHHHHHHHHHHHHhcCCEEEEEEEECCE
Confidence            33   334566667777777777764    11221112234455555542  12235789999999986543 2   245


Q ss_pred             CEEEEeC-CCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          251 TIVRLTP-PLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       251 ~~lRi~~-~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      +++|+++ +..+++++++.++++|+++++ ++.+
T Consensus       444 ~~lRi~~~~~~~t~~di~~~~~~l~~~~~-~~~~  476 (486)
T 1js3_A          444 FVLRFAICSRKVESGHVRLAWEHIRGLAA-ELLA  476 (486)
T ss_dssp             EEEEEECCCTTCCHHHHHHHHHHHHHHHH-HHHC
T ss_pred             EEEEEEeCCCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence            7899996 445789999999999999988 7654

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=99.61  E-value=7.2e-14  Score=129.29  Aligned_cols=226  Identities=12%  Similarity=0.036  Sum_probs=141.8

Q ss_pred             CCHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-
Q 021893           45 GDITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-  120 (306)
Q Consensus        45 ~d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-  120 (306)
                      -|+++|+++|+++   +..+.+|+++..++++|.+.+    +++|.++|++||+++++|++|++.......+.....++ 
T Consensus       216 ~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~----l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~  291 (475)
T 3k40_A          216 MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDY----LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIE  291 (475)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGG
T ss_pred             cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCC----HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcc
Confidence            3899999999863   223677888888888998888    99999999999999999999985322211111111222 


Q ss_pred             CCcEEEe--cccccCCcccceeeEeCHH-HH-hhcCCC---C-c---c-----CCC---CCCHHHHHHHHHHHHHHhh--
Q 021893          121 RPDMVIL--GKALGGGVIPVSAVLADKE-VM-LCIQPG---E-H---G-----STF---GGNPLASAVAIASLDVIRD--  179 (306)
Q Consensus       121 ~~d~~s~--sK~~~~G~~~~g~~~~~~~-~~-~~~~~~---~-~---~-----~~~---~~~~~~~~aa~~al~~~~~--  179 (306)
                      ..|.+++  +|++++.+ .+|+++.+++ .+ +.+...   . .   .     ..+   .+-........++++.+..  
T Consensus       292 ~~Ds~~~~~hK~l~~p~-g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g  370 (475)
T 3k40_A          292 SADSFNFNPHKWMLVNF-DCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVEN  370 (475)
T ss_dssp             GCSEEEECHHHHSSCCS-SCEEEEESSGGGC---------------------------CCCGGGTHHHHHHHHHHHHHHH
T ss_pred             cCCEEEECchhccCCCC-ceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHhHHH
Confidence            3477765  49998777 8888877643 32 222110   0 0   0     000   0101123334444554443  


Q ss_pred             -ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCcee-cc---CCCCEEE
Q 021893          180 -EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA-KP---THDTIVR  254 (306)
Q Consensus       180 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~-~~---~~~~~lR  254 (306)
                       ++..++..++.+++++.|++..    +.....+....++.+.+..  ......++.+.|.++|..+ .+   .+..++|
T Consensus       371 ~~~~~~~~~~~a~~l~~~L~~~~----g~~l~~~~~~~iv~f~~~~--~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR  444 (475)
T 3k40_A          371 LQAHIRRHCNFAKQFGDLCVADS----RFELAAEINMGLVCFRLKG--SNERNEALLKRINGRGHIHLVPAKIKDVYFLR  444 (475)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHST----TEEESSCCBTTEEEEEESS--CHHHHHHHHHHHHHHTSCBCEEEEETTEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCC----CEEEecCCceEEEEEEeCC--chHHHHHHHHHHHhCCcEEEEeeEECCEEEEE
Confidence             3456677778888888887752    1222222344556666653  1345678999999988643 33   3467899


Q ss_pred             EeCC-CCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          255 LTPP-LSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       255 i~~~-~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +++. ..++++||+.++++|+++++ ++.
T Consensus       445 ~~~~~~~tt~~di~~~~~~i~~~~~-~~~  472 (475)
T 3k40_A          445 MAICSRFTQSEDMEYSWKEVSAAAD-EME  472 (475)
T ss_dssp             EECCCTTCCHHHHHHHHHHHHHHHH-HHH
T ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHH-HHh
Confidence            9965 44689999999999999988 654

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.60  E-value=2.8e-14  Score=128.51  Aligned_cols=204  Identities=13%  Similarity=0.107  Sum_probs=132.6

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |+++|+++++   +++++|++++   ++|...+    +++|.++|++||+++|+|++|+ |....     ...++..+|+
T Consensus       117 d~~~l~~~i~---~~~~~v~~~~---~~g~~~~----~~~i~~l~~~~~~~li~D~a~~~g~~~~-----~~~~g~~~~~  181 (390)
T 3b8x_A          117 DIESLKEAVT---DSTKAILTVN---LLGNPNN----FDEINKIIGGRDIILLEDNCESMGATFN-----NKCAGTFGLM  181 (390)
T ss_dssp             CHHHHHHHCC---TTEEEEEEEC---GGGCCCC----HHHHHHHHTTSCCEEEEECTTCTTCEET-----TEETTSSSSE
T ss_pred             CHHHHHHHhC---cCCeEEEEEC---CccChhh----HHHHHHHHHHcCCEEEEECcCcccCEEC-----Ccccccccce
Confidence            8999999987   4688888764   2454556    9999999999999999999998 43222     2344566788


Q ss_pred             EEeccccc----CCcccceeeEeCH-HHHhhcCC---CC----------------------------ccCCCCCCHHHHH
Q 021893          125 VILGKALG----GGVIPVSAVLADK-EVMLCIQP---GE----------------------------HGSTFGGNPLASA  168 (306)
Q Consensus       125 ~s~sK~~~----~G~~~~g~~~~~~-~~~~~~~~---~~----------------------------~~~~~~~~~~~~~  168 (306)
                      .++||..+    +|.  .|++++++ ++.+.++.   ..                            .+..+..+.+..+
T Consensus       182 ~~~s~~~~k~~~~g~--gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa  259 (390)
T 3b8x_A          182 GTFSSFYSNHIATME--GGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGA  259 (390)
T ss_dssp             EEEECCTTSSSCSSS--CEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHH
T ss_pred             EEEEccCCCCCccCC--ceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHH
Confidence            88886554    333  37888875 55443321   11                            0111225667777


Q ss_pred             HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE---EEeeeEEEEEEecCCChhhHHHHHHHHHHCCcee
Q 021893          169 VAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEV---RGRGLFNAVEFDKTALPVSAYDICLKMKERGILA  245 (306)
Q Consensus       169 aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~  245 (306)
                      ++.++++.+.  +..++.+++.+++.+.|+++    ++.....   ......+++.++.. .+.+..++.+.|.++||.+
T Consensus       260 ~~l~~l~~l~--~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~l~~~L~~~gI~v  332 (390)
T 3b8x_A          260 IGIEQLKKLP--RFISVRRKNAEYFLDKFKDH----PYLDVQQETGESSWFGFSFIIKKD-SGVIRKQLVENLNSAGIEC  332 (390)
T ss_dssp             HHHHHHHHHH--HHHHHHHHHHHHHHHHHTTC----SSEEECCCCSBCCCCEEEEEECTT-SCCCHHHHHHHHHHTTBCC
T ss_pred             HHHHHHHHHH--HHHHHHHHHHHHHHHHhcCC----CCcccCCCCCCcccEEEEEEecCc-CcccHHHHHHHHHHCCCCe
Confidence            7766676553  35667777777777777653    1121111   11222345555421 0235778999999999988


Q ss_pred             ccC-------C-C---------------------CEEEEeCCCCCCHHHHHHHHHHH
Q 021893          246 KPT-------H-D---------------------TIVRLTPPLSISSNELQEGSKAL  273 (306)
Q Consensus       246 ~~~-------~-~---------------------~~lRi~~~~~~t~~~i~~~~~~l  273 (306)
                      ++.       . +                     +.||++++..+|++|++++++.|
T Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l  389 (390)
T 3b8x_A          333 RPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL  389 (390)
T ss_dssp             BCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred             eeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence            852       1 0                     25999999999999999999876

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.59  E-value=1.9e-14  Score=133.00  Aligned_cols=218  Identities=12%  Similarity=0.079  Sum_probs=139.5

Q ss_pred             CCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCC
Q 021893           44 FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRP  122 (306)
Q Consensus        44 ~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~  122 (306)
                      ..|+++||++++++  ++++|+++..+++  ...+    +++|+++|++||++|++|++|. |+...|... ....+.+.
T Consensus       189 ~iD~d~le~~l~~~--~~klIi~~~s~~~--~~~d----l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~-~~~~~aDi  259 (490)
T 2a7v_A          189 LIDYNQLALTARLF--RPRLIIAGTSAYA--RLID----YARMREVCDEVKAHLLADMAHISGLVAAKVIP-SPFKHADI  259 (490)
T ss_dssp             SBCHHHHHHHHHHH--CCSEEEECCSSCC--SCCC----HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSC-CGGGTCSE
T ss_pred             CcCHHHHHHHHhhc--CCcEEEEcCCCCC--Cccc----HHHHHHHHHHcCCEEEEccccccccccCCcCC-CCCCCCCE
Confidence            34899999999864  4567777654433  3455    9999999999999999999986 543333211 11112222


Q ss_pred             cEEEecccccCCcccceeeEeCHH---------------HHhhcCCCCccCCC-CCCHHHHHHHHHHHHHHhh---ccHH
Q 021893          123 DMVILGKALGGGVIPVSAVLADKE---------------VMLCIQPGEHGSTF-GGNPLASAVAIASLDVIRD---EKLA  183 (306)
Q Consensus       123 d~~s~sK~~~~G~~~~g~~~~~~~---------------~~~~~~~~~~~~~~-~~~~~~~~aa~~al~~~~~---~~~~  183 (306)
                      -+.|++|+++ |+ +.|+++++++               +.+.++........ ..+...+++..++++.+..   +++.
T Consensus       260 v~~S~hK~l~-Gp-~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~  337 (490)
T 2a7v_A          260 VTTTTHKTLR-GA-RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYS  337 (490)
T ss_dssp             EEEESSGGGC-SC-SCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred             EEECCcccCc-cc-cchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHH
Confidence            3347779995 45 6688888764               22333321111111 2334444454556665543   3467


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc----C-----CCCEEE
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP----T-----HDTIVR  254 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~----~-----~~~~lR  254 (306)
                      +++.++.+++++.|++.+..    +........++++++.+.  +.+..++.+.|.+.||.+..    +     .+..||
T Consensus       338 ~~~~~na~~L~~~L~~~G~~----v~~~~t~t~lv~vdl~~~--g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iR  411 (490)
T 2a7v_A          338 LQVLKNARAMADALLERGYS----LVSGGTDNHLVLVDLRPK--GLDGARAERVLELVSITANKNTCPGDRSAITPGGLR  411 (490)
T ss_dssp             HHHHHHHHHHHHHHHHTTCE----EGGGSCSSSEEEEECTTT--TCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEE
T ss_pred             HHHHHHHHHHHHHHHHcCcE----EecCCCCCeEEEEEeCCC--CCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceE
Confidence            78888999999999885311    111112345677776542  34567788999999999873    2     357899


Q ss_pred             EeCC----CCCCHHHHHHHHHHHHHHHh
Q 021893          255 LTPP----LSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       255 i~~~----~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ++.+    ...+++|++.+++.|.+++.
T Consensus       412 ig~~a~t~~g~~~~d~~~~~~~i~~~l~  439 (490)
T 2a7v_A          412 LGAPALTSRQFREDDFRRVVDFIDEGVN  439 (490)
T ss_dssp             EESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             ecccccccCCCCHHHHHHHHHHHHHHHH
Confidence            9653    35789999999999999886

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.54  E-value=4.8e-14  Score=126.67  Aligned_cols=216  Identities=16%  Similarity=0.113  Sum_probs=131.4

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |++++++++...++++++|+++   +++|...+    +++|.++|+ ||+++|+|++|+ |....+.... ..+ .+.++
T Consensus       115 d~~~l~~~i~~~~~~tk~v~~~---~~~G~~~~----~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g-~~~-~d~~~  184 (377)
T 3ju7_A          115 DKTVLWDKIEELKEEVAIVVPY---ATFGSWMN----LEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYG-QDF-SGMII  184 (377)
T ss_dssp             CHHHHHHHHHHHGGGEEEECCB---CGGGBCCC----CHHHHHHHH-TTCCBEEECTTCTTCEETTEETT-TTC-SSEEE
T ss_pred             CHHHHHHHHhcCCCCceEEEEE---CCCCCccC----HHHHHHHHh-cCCEEEEECCCccCCeECCEecc-CCC-CcEEE
Confidence            8999999984311238888743   34677777    999999999 999999999997 2111111110 000 12344


Q ss_pred             EEec--ccccCCcccceeeEe-CHHHHhhcCCCCc------------cCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHH
Q 021893          125 VILG--KALGGGVIPVSAVLA-DKEVMLCIQPGEH------------GSTFGGNPLASAVAIASLDVIRDEKLAERSAHL  189 (306)
Q Consensus       125 ~s~s--K~~~~G~~~~g~~~~-~~~~~~~~~~~~~------------~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~  189 (306)
                      .||+  |.+++|  ..|+++. ++++.+.++....            +..+..+.+.++.+...++.+  +...++.+++
T Consensus       185 ~S~~~~K~l~~g--~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l--~~~~~~~~~~  260 (377)
T 3ju7_A          185 YSFHATKPFGIG--EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKKW--DDKLKERTRI  260 (377)
T ss_dssp             EECBTTSSSCCB--SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHTH--HHHHHHHHHH
T ss_pred             EECCCCCcCCCC--CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence            4543  999864  4566665 5666655432211            123345566666666666544  3356777788


Q ss_pred             HHHHHHHHHHHHhhCCCceeeEE-Eee-eEEEEEEecCCChhhHHHHHHHHHHCCceeccCC------------------
Q 021893          190 GEELRQHLFKIQQQFPNYVKEVR-GRG-LFNAVEFDKTALPVSAYDICLKMKERGILAKPTH------------------  249 (306)
Q Consensus       190 ~~~l~~~L~~~~~~~~~~~~~~~-~~g-~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~------------------  249 (306)
                      .+++.+.|+.....-........ ... .++.+.+++   ..+..++.+.|.++||.++...                  
T Consensus       261 ~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~  337 (377)
T 3ju7_A          261 SEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPE---EVRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDL  337 (377)
T ss_dssp             HHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCT---TSCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCC
T ss_pred             HHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCC---hhhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCC
Confidence            88888888775311000111101 111 122343332   2347889999999999876421                  


Q ss_pred             -------CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          250 -------DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       250 -------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                             .+.||+.++...|++|++++++.|++++.
T Consensus       338 p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~  373 (377)
T 3ju7_A          338 TRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVV  373 (377)
T ss_dssp             HHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC---
T ss_pred             HHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHh
Confidence                   25789998889999999999999988776

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.53  E-value=5.8e-13  Score=121.91  Aligned_cols=199  Identities=15%  Similarity=0.179  Sum_probs=125.8

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehh-hhcccccccccccccCCCCCcEEEe-ccccc----
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEI-QSGLARSGRMLASDWEEVRPDMVIL-GKALG----  132 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~-~~g~~~~g~~~~~~~~~~~~d~~s~-sK~~~----  132 (306)
                      +++++|+++.+ |++|.+.+    +++|.++|+++|+++++|.. ++ ++...  . ...  ...|++++ +|.|+    
T Consensus       195 ~~t~~v~i~~p-n~tG~~~~----l~~i~~la~~~g~~vivd~d~~a-~g~~~--~-~~~--~g~D~~~~s~kk~~~~~~  263 (438)
T 1wyu_A          195 EEVGAVVVQNP-NFLGALED----LGPFAEAAHGAGALFVAVADPLS-LGVLK--P-PGA--YGADIAVGDGQSLGLPMG  263 (438)
T ss_dssp             TTEEEEEEESS-CTTSBCCC----HHHHHHHHHHTTCEEEEECCTTG-GGTBC--C-HHH--HTCSEEEEECTTTTCCCG
T ss_pred             CCeEEEEEECC-CCCeEEec----HHHHHHHHHHcCCEEEEEechhh-ccCcC--C-Ccc--CCCCEEEECCcccCCCcc
Confidence            57899998887 89998887    99999999999999996632 22 21111  1 112  24577655 47653    


Q ss_pred             -CCcccceeeEeCHHHHhhcCCCCc--------------------------cCCCCC---CHHHHHHHHHHHHHHhh---
Q 021893          133 -GGVIPVSAVLADKEVMLCIQPGEH--------------------------GSTFGG---NPLASAVAIASLDVIRD---  179 (306)
Q Consensus       133 -~G~~~~g~~~~~~~~~~~~~~~~~--------------------------~~~~~~---~~~~~~aa~~al~~~~~---  179 (306)
                       +|. ++|++++++++++.+.....                          ..+...   +.+...++...++.+..   
T Consensus       264 ~~Gp-~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~  342 (438)
T 1wyu_A          264 FGGP-HFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGL  342 (438)
T ss_dssp             GGCS-CCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCC-CeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHH
Confidence             577 89999999988877643210                          112211   22322222222444433   


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCcee--ccC---CCCEEE
Q 021893          180 EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA--KPT---HDTIVR  254 (306)
Q Consensus       180 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~--~~~---~~~~lR  254 (306)
                      ++..++.+++++++.+.|+++.    +.... .....+..+.+..   +.+..++++.|.++||.+  .++   +++++|
T Consensus       343 ~~~~~~~~~~~~~l~~~L~~~~----g~~~~-~~~~~~~~~~~~~---~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~lR  414 (438)
T 1wyu_A          343 REVALKSVEMAHKLHALLLEVP----GVRPF-TPKPFFNEFALAL---PKDPEAVRRALAERGFHGATPVPREYGENLAL  414 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTST----TCEEC-SCSSBCSEEEEEC---SSCHHHHHHHHHHTTCCCCEECCTTSCSSEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhcCC----CeEEC-CCCCeEEEEEEeC---CCCHHHHHHHHHHCCceeccccccccCCCeEE
Confidence            2355666677777777776641    11111 1112222233332   135678999999999998  443   378999


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHH
Q 021893          255 LTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       255 i~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      +++...++++|++.++++|++++
T Consensus       415 is~~~~~t~edi~~~~~~l~~~l  437 (438)
T 1wyu_A          415 FAATELHEEEDLLALREALKEVL  437 (438)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHC
T ss_pred             EEecccCCHHHHHHHHHHHHHHh
Confidence            99988899999999999998764

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.51  E-value=2.6e-13  Score=122.96  Aligned_cols=181  Identities=9%  Similarity=0.027  Sum_probs=117.4

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEcc----ccCCCCcccCChhHHHHHHHHHHH--cCCEEEEehhhhcccccccccccccC
Q 021893           45 GDITALEKIFKESGDQIAGFLFEP----IQGEAGVIIPPDGYLKAVRDLCSK--YNILMIADEIQSGLARSGRMLASDWE  118 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~----~~~~~G~~~~~~~~l~~i~~l~~~--~gi~li~De~~~g~~~~g~~~~~~~~  118 (306)
                      .|+++++++++   +++++|++++    ++|++|.+.+    +++|.++|++  ||+++++|++|+.+.......   .+
T Consensus       147 ~d~e~l~~ai~---~~tklV~i~~s~g~p~nptg~v~~----l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~---~~  216 (409)
T 3jzl_A          147 VDFPRIAKKMT---PKTKMIGIQRSRGYADRPSFTIEK----IKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPP---EV  216 (409)
T ss_dssp             CCHHHHHHHCC---TTEEEEEEECSCTTSSSCCCCHHH----HHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSG---GG
T ss_pred             cCHHHHHHhcc---CCCeEEEEECCCCCCCCCcCcccc----HHHHHHHHHhhCCCCEEEEeCCcccccccCCcc---cc
Confidence            58999999987   5799999999    9999998877    9999999999  999999999997432111111   12


Q ss_pred             CCCCcEEEecccccCCc-ccceeeEeCHHHHhhcCCC--C--ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893          119 EVRPDMVILGKALGGGV-IPVSAVLADKEVMLCIQPG--E--HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL  193 (306)
Q Consensus       119 ~~~~d~~s~sK~~~~G~-~~~g~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l  193 (306)
                      +.+.-+.|++|.++|+. ...||+++++++++.++..  .  .............++...++.+  ....++..++...+
T Consensus       217 g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~~~--~~r~~~~~~~a~~l  294 (409)
T 3jzl_A          217 GADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLA--PHVTAQAIKGARFT  294 (409)
T ss_dssp             TCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHHH
T ss_pred             CCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhccccccccccccHHHHHHHHHHHhhH--HHHHHHHHHHHHHH
Confidence            33333448889999542 1468999999998877541  1  1111111111123344444433  23466777888888


Q ss_pred             HHHHHHHHhhC-CCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCC
Q 021893          194 RQHLFKIQQQF-PNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG  242 (306)
Q Consensus       194 ~~~L~~~~~~~-~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~G  242 (306)
                      ++.|++++... |.  ...+....++++.+.+   ......|++.|....
T Consensus       295 a~~L~~~g~~v~p~--~~~~~~~~i~~i~l~~---~~~~~~~~~~L~~~~  339 (409)
T 3jzl_A          295 AAMLAEFGVEADPV--WDAPRTDLIQSVSFHN---KEKMVAFAQAIQAAS  339 (409)
T ss_dssp             HHHHHHTTCEEESC--TTSCCSSSCCEEECSC---HHHHHHHHHHHHHTS
T ss_pred             HHHHHhCCCcccCC--CCCCCccEEEEEEeCC---HHHHHHHHHHHHhcC
Confidence            88888864210 00  0011222267777763   566778999999884

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.51  E-value=6.5e-13  Score=119.39  Aligned_cols=232  Identities=15%  Similarity=0.115  Sum_probs=147.4

Q ss_pred             CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-CCc
Q 021893           46 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-RPD  123 (306)
Q Consensus        46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~~d  123 (306)
                      |++.||++|++++ +.+.+|+.++.++.++..-+    |++|.++|++||+++++||+|+........+..+.+.. ..|
T Consensus       201 d~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~dd----I~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD  276 (501)
T 3hl2_A          201 DLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDR----LEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRID  276 (501)
T ss_dssp             CHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCC----HHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCC
T ss_pred             CHHHHHHHHHhcCCCcEEEEEecCCCCCCccccc----HHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCc
Confidence            8999999999985 45666666655554444456    99999999999999999999985322222121222223 378


Q ss_pred             EEEec--ccccCCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHH
Q 021893          124 MVILG--KALGGGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHL  197 (306)
Q Consensus       124 ~~s~s--K~~~~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L  197 (306)
                      +++.|  |.+-.-+ +.+.+.. ++++++.+..... ++-+  .......+.++..+..   .++.++..++.+++++.|
T Consensus       277 ~vVqS~HK~llvpI-GG~ii~~~d~e~l~~~~~~yP-Gr~S--~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L  352 (501)
T 3hl2_A          277 AFVQSLDKNFMVPV-GGAIIAGFNDSFIQEISKMYP-GRAS--ASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQI  352 (501)
T ss_dssp             EEEEEHHHHHCCCS-SCEEEEESCHHHHHHHHHTSC-SCBC--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecccccceeec-CceEEEeCCHHHHHHHHHhCC-CCCC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88776  7664222 2222433 5667776543221 1111  1222222223333332   446778889999999999


Q ss_pred             HHHHhhCCCceeeEEEeeeEEEEEEecCC--ChhhHHHHHHHHHHCCce---eccC---------------------CCC
Q 021893          198 FKIQQQFPNYVKEVRGRGLFNAVEFDKTA--LPVSAYDICLKMKERGIL---AKPT---------------------HDT  251 (306)
Q Consensus       198 ~~~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~~~~~~~~l~~~Gi~---~~~~---------------------~~~  251 (306)
                      +++...++..+...+.....+.+.+....  ......+|...|..++|.   +.+.                     .-.
T Consensus       353 ~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~  432 (501)
T 3hl2_A          353 KKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCA  432 (501)
T ss_dssp             HHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTSCHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSC
T ss_pred             HHHHHhcChhhcCCCCCceeEEEecccccccccccHHHHHHHHHhcCCCcceeecCCCceEECCeeecCcccCCCCCCch
Confidence            99987665555566655566677665432  123466889999988543   3221                     136


Q ss_pred             EEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCCCCC
Q 021893          252 IVRLTPPLSISSNELQEGSKALHDVLELDLPKMRK  286 (306)
Q Consensus       252 ~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~~~~  286 (306)
                      ++-++..+.++++|++.++++|++.+. .+.+...
T Consensus       433 yl~~a~aiG~~~~~v~~~~~~l~~~~~-~~~~~~~  466 (501)
T 3hl2_A          433 YLNAASAIGMKMQDVDLFIKRLDRCLK-AVRKERS  466 (501)
T ss_dssp             EEEEECCTTCCHHHHHHHHHHHHHHHH-HHHC---
T ss_pred             HHHHHHHcCCCHHHHHHHHHHHHHHHH-HHHHhhc
Confidence            788888889999999999999999998 8765443

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.51  E-value=2e-13  Score=131.67  Aligned_cols=230  Identities=11%  Similarity=-0.040  Sum_probs=140.1

Q ss_pred             CHHHH-----HHHHHhcCCc---E----EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc-cccccc-
Q 021893           46 DITAL-----EKIFKESGDQ---I----AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG-LARSGR-  111 (306)
Q Consensus        46 d~~~l-----e~~i~~~~~~---~----~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g-~~~~g~-  111 (306)
                      |+++|     +++|+++.++   +    ++++++.++ ++|.+.+    +++|.++|++||++|++||+|++ +...+. 
T Consensus       255 d~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn-~~G~v~d----l~~I~~la~~~g~~livDeAh~~~~~f~~~~  329 (730)
T 1c4k_A          255 YDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGT-YDGTIYN----AHEVVKRIGHLCDYIEFDSAWVGYEQFIPMM  329 (730)
T ss_dssp             CGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBC-TTSEEEC----HHHHHHHHGGGBSEEEEECTTCCGGGSSGGG
T ss_pred             CHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCC-CCCeecC----HHHHHHHHHHcCCeEEEEcccccccccCccc
Confidence            56666     8888754111   2    566665543 6888888    99999999999999999999973 221111 


Q ss_pred             ----ccccccCCCC----CcEEEecccccCCcccceeeEeCHHHHh---------hcCCC-CccCCCCCCHHHHHHHHHH
Q 021893          112 ----MLASDWEEVR----PDMVILGKALGGGVIPVSAVLADKEVML---------CIQPG-EHGSTFGGNPLASAVAIAS  173 (306)
Q Consensus       112 ----~~~~~~~~~~----~d~~s~sK~~~~G~~~~g~~~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~aa~~a  173 (306)
                          .+..+.++.+    .-+.|++|+++|-- ..|+++.+++.+.         .+... ....+.+.+...+++..++
T Consensus       330 ~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~-~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaal~aA  408 (730)
T 1c4k_A          330 RNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFS-QTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVN  408 (730)
T ss_dssp             GGGCTTSCCCCCTTSCEEEEEECHHHHSSCCT-TCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHHHH
T ss_pred             CCcCcccccccCCCCCCEEEEECCCCCCCCCC-CEEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHHHHHH
Confidence                1112123332    12337779876432 3445655443221         11100 0112234556666666677


Q ss_pred             HHHHhh---ccHHHHHHHHHHHHHHHHHH-HH-hh-CCCce----------------------ee--------E-EEeee
Q 021893          174 LDVIRD---EKLAERSAHLGEELRQHLFK-IQ-QQ-FPNYV----------------------KE--------V-RGRGL  216 (306)
Q Consensus       174 l~~~~~---~~~~~~~~~~~~~l~~~L~~-~~-~~-~~~~~----------------------~~--------~-~~~g~  216 (306)
                      ++.+..   .++.++..++.+++++.|++ +. .. +.+..                      ..        . ...+.
T Consensus       409 ~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  488 (730)
T 1c4k_A          409 AAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQ  488 (730)
T ss_dssp             HHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTC
T ss_pred             HHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhccccccCCcc
Confidence            776654   34667788888888888877 21 00 00000                      00        0 00110


Q ss_pred             --E----EEEEEec--------CCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          217 --F----NAVEFDK--------TALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       217 --~----~~i~~~~--------~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                        +    +.+..+.        ...+..+..+.+.|.++||.+...+...+|++++..+|+++++.++++|+++.+ .+.
T Consensus       489 ~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~~~~~ir~~~s~g~t~e~i~~Ll~aL~~i~~-~~~  567 (730)
T 1c4k_A          489 YYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSDLNSILFLMTPAETPAKMNNLITQLLQLQR-LIE  567 (730)
T ss_dssp             EEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEECSSEEEEECCTTCCHHHHHHHHHHHHHHHH-HHH
T ss_pred             cccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH-hcc
Confidence              1    3343321        112346788999999999999887788999999999999999999999999987 663

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.51  E-value=2.3e-13  Score=132.15  Aligned_cols=229  Identities=14%  Similarity=0.059  Sum_probs=147.1

Q ss_pred             CHHHHHHHHHhcCC-------cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cccc
Q 021893           46 DITALEKIFKESGD-------QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-ASDW  117 (306)
Q Consensus        46 d~~~le~~i~~~~~-------~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~~~  117 (306)
                      |++.|+++|++++.       ++++++++.+ +++|.+.+    +++|.++|++||++|++||+|++....+..+ ....
T Consensus       291 d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d----l~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~~~~  365 (755)
T 2vyc_A          291 QPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN----AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYA  365 (755)
T ss_dssp             SHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC----HHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTTSSS
T ss_pred             CHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC----HHHHHHHHHHcCCEEEEECcCchhcccCcccCCcch
Confidence            89999999986422       1235555544 46888888    9999999999999999999997421111111 0111


Q ss_pred             -CC--CCC------cEEEecccccCCcccceeeEeCHH--HH--hhcCCC-CccCCCCCCHHHHHHHHHHHHHHhh---c
Q 021893          118 -EE--VRP------DMVILGKALGGGVIPVSAVLADKE--VM--LCIQPG-EHGSTFGGNPLASAVAIASLDVIRD---E  180 (306)
Q Consensus       118 -~~--~~~------d~~s~sK~~~~G~~~~g~~~~~~~--~~--~~~~~~-~~~~~~~~~~~~~~aa~~al~~~~~---~  180 (306)
                       .+  .+.      -+.|++|+++|-- ..|+++.+++  .+  ..+... ....+.+.+.+.+++..++++.+..   +
T Consensus       366 ~~g~~aD~~~~~~iv~~S~hK~L~g~~-~g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~~~l~~~gg~  444 (755)
T 2vyc_A          366 MRGEPGDHNGPTVFATHSTHKLLNALS-QASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGL  444 (755)
T ss_dssp             SCSCCCCCSSBEEEEEEETTTSSSCCT-TCEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSTHHHH
T ss_pred             hcCCcCCccCCCeEEEECccccccCcC-CeeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhhhHH
Confidence             22  222      2347889986433 4566766543  11  111110 1122334567777777788887755   3


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhhC---CCcee------eEEE--------------------------------------
Q 021893          181 KLAERSAHLGEELRQHLFKIQQQF---PNYVK------EVRG--------------------------------------  213 (306)
Q Consensus       181 ~~~~~~~~~~~~l~~~L~~~~~~~---~~~~~------~~~~--------------------------------------  213 (306)
                      ++.++..++.+++++.|+++...+   ..+..      ....                                      
T Consensus       445 ~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~  524 (755)
T 2vyc_A          445 SLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDI  524 (755)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhccCccccccccccc
Confidence            478889999999999999875410   00100      0000                                      


Q ss_pred             -ee------eEEEEEEecCC-------ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 021893          214 -RG------LFNAVEFDKTA-------LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLEL  279 (306)
Q Consensus       214 -~g------~~~~i~~~~~~-------~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~  279 (306)
                       .|      ..+.+..+...       .+..+..+.+.|.++||.+...+.+.+|++++..+|+++++.++++|.++.+ 
T Consensus       525 ~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~~~~~v~~~~~~g~t~~~~~~l~~al~~~~~-  603 (755)
T 2vyc_A          525 PDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKR-  603 (755)
T ss_dssp             CTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEECSSEEEEECCTTCCTTTTHHHHHHHHHHHH-
T ss_pred             CCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeecCCCeEEEEECCCCCHHHHHHHHHHHHHHHH-
Confidence             11      23344443211       1244578999999999999877789999999999999999999999998877 


Q ss_pred             hc
Q 021893          280 DL  281 (306)
Q Consensus       280 ~~  281 (306)
                      .+
T Consensus       604 ~~  605 (755)
T 2vyc_A          604 HY  605 (755)
T ss_dssp             HH
T ss_pred             hh
Confidence            65

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.49  E-value=2e-13  Score=122.02  Aligned_cols=209  Identities=10%  Similarity=0.008  Sum_probs=142.5

Q ss_pred             HHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEE
Q 021893           47 ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVI  126 (306)
Q Consensus        47 ~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s  126 (306)
                      ++.++..++   +++++|.+.++.+.+|.+.|    +     +|+++|+++++|.+|+ +  ...++..+.++  ..+++
T Consensus       142 ~~~~~~~i~---~~t~lV~~~h~et~tG~~~p----i-----i~~~~~~~~~vD~~q~-~--g~~~id~~~~~--~~~~s  204 (377)
T 3e77_A          142 PDPSTWNLN---PDASYVYYCANETVHGVEFD----F-----IPDVKGAVLVCDMSSN-F--LSKPVDVSKFG--VIFAG  204 (377)
T ss_dssp             CCGGGCCCC---TTCSCEEEESEETTTTEECS----S-----CCCCTTCCEEEECTTT-T--TSSCCCGGGCS--EEEEE
T ss_pred             CChHHhccC---CCccEEEEeCccCchheEch----h-----hhccCCCEEEEEcccc-c--CCCCCchhhcC--EEEEe
Confidence            444544443   57889999988888999887    5     4789999999999998 2  12234444444  23445


Q ss_pred             ecccccCCcccceeeEeCHHHHhhcCCCC------------ccCCCCCCHHHHHHHHHHHHHHhhc----cHHHHHHHHH
Q 021893          127 LGKALGGGVIPVSAVLADKEVMLCIQPGE------------HGSTFGGNPLASAVAIASLDVIRDE----KLAERSAHLG  190 (306)
Q Consensus       127 ~sK~~~~G~~~~g~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~aa~~al~~~~~~----~~~~~~~~~~  190 (306)
                      .-|.+| .. ++|+++.++++++.+.+..            .....+++..++.++.++++++.+.    .+.++.+++.
T Consensus       205 ~~K~~g-p~-G~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~  282 (377)
T 3e77_A          205 AQKNVG-SA-GVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKS  282 (377)
T ss_dssp             GGGTTS-CT-TCEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred             cccccC-CC-ccEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence            559994 55 7788999988766554321            1112355667777888999988664    3567777888


Q ss_pred             HHHHHHHHHHHhhCCCceee---E-EEeeeEEEEEEecCCChhh-HHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCH
Q 021893          191 EELRQHLFKIQQQFPNYVKE---V-RGRGLFNAVEFDKTALPVS-AYDICLKMKERGILAKPTH--DTIVRLTPPLSISS  263 (306)
Q Consensus       191 ~~l~~~L~~~~~~~~~~~~~---~-~~~g~~~~i~~~~~~~~~~-~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~  263 (306)
                      +++++.|+++.    +....   . ...+..+.|.++......+ ...+.+.+.++||.+.++.  .+.+|+++...+|+
T Consensus       283 ~~l~~~L~~~~----g~~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~l~~l~~~Gi~~~~g~~~~g~iRiS~~~~~t~  358 (377)
T 3e77_A          283 QTIYEIIDNSQ----GFYVCPVEPQNRSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTI  358 (377)
T ss_dssp             HHHHHHHHTST----TSEECCSCGGGBCSSEEEEEESSTTCCHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCH
T ss_pred             HHHHHHHHhcC----CceecCCCHHHcCCcEEEEEcCCCCCchhHHHHHHHHHHHCCcEEeCCCCcCCEEEEECCCCCCH
Confidence            88888887652    11111   1 1234457777764211111 2467888889999987752  36799999999999


Q ss_pred             HHHHHHHHHHHHHHh
Q 021893          264 NELQEGSKALHDVLE  278 (306)
Q Consensus       264 ~~i~~~~~~l~~~l~  278 (306)
                      +||+.+++.|+++++
T Consensus       359 edId~l~~al~~~~~  373 (377)
T 3e77_A          359 EDVQKLAAFMKKFLE  373 (377)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999999887

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.47  E-value=6.9e-13  Score=120.61  Aligned_cols=178  Identities=12%  Similarity=0.076  Sum_probs=118.2

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEcc----ccCCCCcccCChhHHHHHHHHHHH--cCCEEEEehhhhcccccccccccccC
Q 021893           45 GDITALEKIFKESGDQIAGFLFEP----IQGEAGVIIPPDGYLKAVRDLCSK--YNILMIADEIQSGLARSGRMLASDWE  118 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~----~~~~~G~~~~~~~~l~~i~~l~~~--~gi~li~De~~~g~~~~g~~~~~~~~  118 (306)
                      .|+++|+++++++ +++++|++++    ++|++|.+.+    +++|.++|++  +|+++++|++|+.+.....+.   .+
T Consensus       162 ~D~e~l~~~l~~~-~~tklV~i~~s~~~p~nptg~i~d----l~~i~~la~~~~~g~~livD~a~~~~~~~~~p~---~~  233 (427)
T 3i16_A          162 PNLEEIEKVLKED-ESITLVHIQRSTGYGWRRALLIED----IKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPT---DV  233 (427)
T ss_dssp             CCHHHHHHHHHTC-TTEEEEEEECSCCSSSSCCCCHHH----HHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGG---GG
T ss_pred             cCHHHHHHHhhCC-CCCEEEEEEcCCCCCCCCcccHHH----HHHHHHHHHHhCCCCEEEEECCCccccccCCcc---cc
Confidence            5899999999853 4799999999    8899988776    9999999999  999999999998442111111   12


Q ss_pred             CCCCcEEEecccccC-C-cccceeeEeCHHHHhhcCCC--CccC-CCCCCHHH-HHHHHHHHHHHhhccHHHHHHHHHHH
Q 021893          119 EVRPDMVILGKALGG-G-VIPVSAVLADKEVMLCIQPG--EHGS-TFGGNPLA-SAVAIASLDVIRDEKLAERSAHLGEE  192 (306)
Q Consensus       119 ~~~~d~~s~sK~~~~-G-~~~~g~~~~~~~~~~~~~~~--~~~~-~~~~~~~~-~~aa~~al~~~~~~~~~~~~~~~~~~  192 (306)
                      +.+..+.|++|.++| | . +.|++++++++++.++..  .... ...++... ...+...++.+  ....++..+++..
T Consensus       234 gaDiv~~S~sK~lgg~g~~-~gG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl~~~--~~r~~~~~~~a~~  310 (427)
T 3i16_A          234 GADLIAGSLIKNIGGGIAP-TGGYLAGTKDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGLFLA--PHISMEALKGAIL  310 (427)
T ss_dssp             TCSEEEEETTSGGGTTTCC-SCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred             CCeEEEecCcccCCCCCCc-eEEEEEECHHHHHHHHHhcccCccCccCCccHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence            333334588899985 3 4 668999999998877641  1111 11111122 23333444433  2346677788888


Q ss_pred             HHHHHHHHHhhCCCceeeEEEeee-----EEEEEEecCCChhhHHHHHHHHHHCC
Q 021893          193 LRQHLFKIQQQFPNYVKEVRGRGL-----FNAVEFDKTALPVSAYDICLKMKERG  242 (306)
Q Consensus       193 l~~~L~~~~~~~~~~~~~~~~~g~-----~~~i~~~~~~~~~~~~~~~~~l~~~G  242 (306)
                      +++.|++....    +  .++.+.     ++.+.+.+   ......|++.|....
T Consensus       311 la~~L~~~g~~----V--~p~~~~~~~~~i~~i~l~~---~~~~~~f~~~l~~~~  356 (427)
T 3i16_A          311 CSRIMELAGFE----V--MPKYDEKRSDIIQSIKFND---KDKLIEFCKGIQTGS  356 (427)
T ss_dssp             HHHHHHHTTCE----E--ESCTTSCCSSSCEEEECSS---HHHHHHHHHHHHHTC
T ss_pred             HHHHHHhCCCe----e--cCCCCCCCccEEEEEEECC---HHHHHHHHHHHhhcC
Confidence            88888876421    1  222333     77777763   456778999998873

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.45  E-value=5.5e-14  Score=126.27  Aligned_cols=209  Identities=9%  Similarity=-0.017  Sum_probs=139.3

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcc-cCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVI-IPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~-~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~  124 (306)
                      ++++++++++   +++++|.+.++.+.+|.+ .+    +++|.     +|+++++|.+|+ +  ...++..+.++  .++
T Consensus       155 ~~~~~~~~l~---~~t~lV~~~h~et~tG~~i~p----i~~i~-----~g~~~~vDa~qs-~--g~~pidv~~~~--~~~  217 (386)
T 3qm2_A          155 VKPMREWQLS---DNAAYLHYCPNETIDGIAIDE----TPDFG-----PEVVVTADFSST-I--LSAPLDVSRYG--VIY  217 (386)
T ss_dssp             ECCGGGCCCC---TTCSCEEECSEETTTTEECCC----CCCCC-----TTCCEEEECTTT-T--TSSCCCGGGCS--EEE
T ss_pred             CchHHHhhcC---CCCcEEEEECCcCCcCEecCc----hhhhc-----CCCEEEEEcccc-c--CCCCCCccccC--EEE
Confidence            3455665555   578899999999999986 66    66664     899999999998 2  11234344443  345


Q ss_pred             EEecccccCCcccceeeEeCHHHHhhcCCCCc-----------c-CCCCCCHHHHHHHHHHHHHHhhc----cHHHHHHH
Q 021893          125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEH-----------G-STFGGNPLASAVAIASLDVIRDE----KLAERSAH  188 (306)
Q Consensus       125 ~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~aa~~al~~~~~~----~~~~~~~~  188 (306)
                      ++.-|.+| .. ++|++++++++++.+.+...           . ...+.|..++.+..++++++.+.    ++.++.++
T Consensus       218 ~s~hK~lG-P~-G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~  295 (386)
T 3qm2_A          218 AGAQKNIG-PA-GLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQ  295 (386)
T ss_dssp             EETTTTTC-CT-TEEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             EecccccC-CC-ccEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            55559995 54 78899999988765553210           0 11134556777777888877654    35667777


Q ss_pred             HHHHHHHHHHHHHhhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHH
Q 021893          189 LGEELRQHLFKIQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNE  265 (306)
Q Consensus       189 ~~~~l~~~L~~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~  265 (306)
                      +.+++++.|+++.. +. ..... ......+.+.++..  +.+ .++...|.++||.+..+.  .+.+|+++...+|++|
T Consensus       296 l~~~l~~~l~~~~~-~~-~~~~~~~rs~~iv~f~~~~~--~~~-~~~~~~L~~~gI~~~~g~~~~~~iRiS~~~~~t~ed  370 (386)
T 3qm2_A          296 KAELLYGVIDNSDF-YR-NDVAQANRSRMNVPFQLADN--TLD-KVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEG  370 (386)
T ss_dssp             HHHHHHHHHHTCSS-EE-CCBCGGGBCSSEEEEEESSG--GGH-HHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHH
T ss_pred             HHHHHHHHHHHCCC-cc-cCCCHHHcCceEEEEECCCc--ccc-HHHHHHHHHCCCEEeCCCCCcCeEEEEcCCCCCHHH
Confidence            88888888876521 00 00011 12334667777631  234 677888999999987652  2569999999999999


Q ss_pred             HHHHHHHHHHHHh
Q 021893          266 LQEGSKALHDVLE  278 (306)
Q Consensus       266 i~~~~~~l~~~l~  278 (306)
                      |+.+++.|+++.+
T Consensus       371 Id~l~~~l~~~~~  383 (386)
T 3qm2_A          371 VKALTDFMIDFER  383 (386)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999999876

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.45  E-value=1.2e-12  Score=118.95  Aligned_cols=177  Identities=12%  Similarity=0.039  Sum_probs=116.9

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEcc----ccCCCCcccCChhHHHHHHHHHHH--cCCEEEEehhhhcccccccccccccC
Q 021893           45 GDITALEKIFKESGDQIAGFLFEP----IQGEAGVIIPPDGYLKAVRDLCSK--YNILMIADEIQSGLARSGRMLASDWE  118 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~----~~~~~G~~~~~~~~l~~i~~l~~~--~gi~li~De~~~g~~~~g~~~~~~~~  118 (306)
                      .|+++++++++++ +++++|++++    ++|++|.+.+    +++|.++|++  +|+++++|++|+.+.....+.   .+
T Consensus       162 ~d~e~l~~~i~~~-~~tklV~i~~s~gyp~nptg~v~d----l~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~---~~  233 (427)
T 3hvy_A          162 VDINTVKEELKKD-DSIKLIHIQRSTGYGWRKSLRIAE----IAEIIKSIREVNENVIVFVDNCYGEFVEEKEPT---DV  233 (427)
T ss_dssp             CCHHHHHHHHHHC-TTEEEEEEESSCCSSSSCCCCHHH----HHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGG---GG
T ss_pred             cCHHHHHHHhhCC-CCCEEEEEECCCCCCCCccccHHH----HHHHHHHHHHhCCCCEEEEECCccccccCCCCc---cc
Confidence            6899999999853 4799999999    8898887766    9999999999  899999999997432111221   12


Q ss_pred             CCCCcEEEecccccCC--cccceeeEeCHHHHhhcCCC--CccCCC-CCCHHH-HHHHHHHHHHHhhccHHHHHHHHHHH
Q 021893          119 EVRPDMVILGKALGGG--VIPVSAVLADKEVMLCIQPG--EHGSTF-GGNPLA-SAVAIASLDVIRDEKLAERSAHLGEE  192 (306)
Q Consensus       119 ~~~~d~~s~sK~~~~G--~~~~g~~~~~~~~~~~~~~~--~~~~~~-~~~~~~-~~aa~~al~~~~~~~~~~~~~~~~~~  192 (306)
                      +.+..+.|++|.++|+  . +.|++++++++++.++..  ...... .+.++. ...+...++..  ....++..++...
T Consensus       234 gaDiv~~S~sK~lgg~g~~-~GG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~~--~~r~~~~~~~a~~  310 (427)
T 3hvy_A          234 GADIIAGSLIKNIGGGIAT-TGGYIAGKEEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFMA--PHVTIEAVKGAVF  310 (427)
T ss_dssp             TCSEEEEETTSGGGTTTCC-SCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred             CCeEEEECCcccccccccc-eEEEEEECHHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhHH--HHHHHHHHHHHHH
Confidence            3333345889999954  3 568999999998877541  111111 111111 33333444433  2346677788888


Q ss_pred             HHHHHHHHHhhCCCceeeEEEeee-----EEEEEEecCCChhhHHHHHHHHHHC
Q 021893          193 LRQHLFKIQQQFPNYVKEVRGRGL-----FNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       193 l~~~L~~~~~~~~~~~~~~~~~g~-----~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      +++.|++.+..    +  .++...     ++++.+.+   ......|++.|...
T Consensus       311 la~~L~~~g~~----V--~p~~~~~~~~li~~~~l~~---~~~~~~f~~~l~~~  355 (427)
T 3hvy_A          311 CARIMELAGFD----V--LPKYNDKRTDIIQAIKFND---EKKLIDFIKGIQTA  355 (427)
T ss_dssp             HHHHHHHTTCE----E--ESCTTSCCSSSEEEEECSS---HHHHHHHHHHHHHT
T ss_pred             HHHHHHhCCCe----e--cCCCCCCCceEEEEEeCCC---HHHHHHHHHHhccc
Confidence            88888876421    1  222222     67777753   45677889999876

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=99.38  E-value=1.5e-11  Score=111.43  Aligned_cols=263  Identities=13%  Similarity=0.071  Sum_probs=149.8

Q ss_pred             EEecCCCCcccchhcccCCc-cccccCCCCCCCcccccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHH
Q 021893            7 SCCGCFHGRTLAAISMSCDN-EAIRGFGPLLPGHLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLK   84 (306)
Q Consensus         7 ~~~~~~hg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~   84 (306)
                      ++..+-|-...-++.+.+-. .+..   |.+.+. .. .-|++.||++|++++ +.+.+|+.+|.++.+|..-+    |+
T Consensus       148 iv~r~aHkSv~kAl~l~Gl~p~~v~---~~~~~~-~~-~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~dd----l~  218 (450)
T 3bc8_A          148 IWPRIDQKSCFKSMVTAGFEPVVIE---NVLEGD-EL-RTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR----LE  218 (450)
T ss_dssp             EEECCCCHHHHHHHHHTTCEEEEEC---CEEETT-EE-ECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC----HH
T ss_pred             EEECCcHHHHHHHHHHcCCeeEEEE---eeecCc-cC-CcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecC----HH
Confidence            33455666666666655521 1111   111111 11 128999999999875 46777888777766666667    99


Q ss_pred             HHHHHHHHcCCEEEEehhhhcccccccccccccCCC-CCcEEEec--ccccCCcccceeeEe-CHHHHhhcCCCCccCCC
Q 021893           85 AVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-RPDMVILG--KALGGGVIPVSAVLA-DKEVMLCIQPGEHGSTF  160 (306)
Q Consensus        85 ~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~~d~~s~s--K~~~~G~~~~g~~~~-~~~~~~~~~~~~~~~~~  160 (306)
                      +|.++|++||++|++|++|++..+....+..+.... ..|.++.|  |.+...+ ..+++.. +++..+.+.........
T Consensus       219 ~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~~v~S~HK~l~a~~-~~~~l~~rd~~~~~~~~~~~~g~~s  297 (450)
T 3bc8_A          219 ELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPV-GGAIIAGFNEPFIQDISKMYPGRAS  297 (450)
T ss_dssp             HHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHSCCS-SCEEEEESCHHHHHHHHHHSCSCBC
T ss_pred             HHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcccCCCEEEECCccCCCchh-ccEEEEecCHHHHHHHHHHhhcCCc
Confidence            999999999999999999985322211111111111 46877666  8887655 6666776 56666555332111111


Q ss_pred             CCCHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecC--CChhhHHHHH
Q 021893          161 GGNPLASAVAIASLDVIRDEK---LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKT--ALPVSAYDIC  235 (306)
Q Consensus       161 ~~~~~~~~aa~~al~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~--~~~~~~~~~~  235 (306)
                        ..+++. ...++..+..+.   +.++..++.+++++.++++...+...+...+..+.-..+.+...  ....+...+.
T Consensus       298 --~SpsL~-l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~  374 (450)
T 3bc8_A          298 --ASPSLD-VLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLG  374 (450)
T ss_dssp             --SHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHH
T ss_pred             --ccHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeE
Confidence              122222 222222222222   34444677889999998887554322222221111112222210  0123455666


Q ss_pred             HHHHHCC---ceec---------------------cCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          236 LKMKERG---ILAK---------------------PTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       236 ~~l~~~G---i~~~---------------------~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      -.+...|   .-+.                     -....++-+..+...+++|++.++++|+++++ .+++
T Consensus       375 i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~-~~~~  445 (450)
T 3bc8_A          375 SMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLN-IVRK  445 (450)
T ss_dssp             HHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHH-HHHH
T ss_pred             EEecCCCCccceeeecccccchhHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHH-HHHh
Confidence            6665553   2222                     23457788888899999999999999999887 6643

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.37  E-value=5.4e-12  Score=112.27  Aligned_cols=198  Identities=10%  Similarity=0.030  Sum_probs=134.2

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEec--ccccCCcc
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGVI  136 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~~  136 (306)
                      +++++|.+.++.+.+|.+.+.         +++ +|+++++|.+|+ ++  ...+..+  .  .|++++|  |.+| .. 
T Consensus       139 ~~t~lv~~~~~e~~tG~~~~~---------i~~-~~~~~~vD~~q~-~g--~~~id~~--~--~d~~~~s~~K~~g-p~-  199 (361)
T 3m5u_A          139 DNADYAYICSNNTIYGTQYQN---------YPK-TKTPLIVDASSD-FF--SRKVDFS--N--IALFYGGVQKNAG-IS-  199 (361)
T ss_dssp             TTSSEEEEESEETTTTEECSS---------CCC-CSSCEEEECGGG-TT--SSCCCCT--T--EEEEEEETTTTSS-CT-
T ss_pred             CCCCEEEEeCCCCCcceeCCc---------ccc-cCCEEEEEcccc-cC--CCCCCcc--c--CCEEEEechhccC-CC-
Confidence            578889998888888987551         333 499999999998 21  1222222  2  4666555  9995 54 


Q ss_pred             cceeeEeCHHHHhhcCCC-------------CccCCCCCCHHHHHHHHHHHHHHhhc-c---HHHHHHHHHHHHHHHHHH
Q 021893          137 PVSAVLADKEVMLCIQPG-------------EHGSTFGGNPLASAVAIASLDVIRDE-K---LAERSAHLGEELRQHLFK  199 (306)
Q Consensus       137 ~~g~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~aa~~al~~~~~~-~---~~~~~~~~~~~l~~~L~~  199 (306)
                      ++|+++.++++.+.+.+.             ......+.+..++.++.++++++.+. +   +.++.+++.+++++.|++
T Consensus       200 G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~  279 (361)
T 3m5u_A          200 GLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDL  279 (361)
T ss_dssp             TCEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH
Confidence            788999999988766431             01112355777888888999988765 3   567777888888888876


Q ss_pred             HHhhCCCceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          200 IQQQFPNYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       200 ~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      +...+. ..... ......+.+.++... ..+ .++...|.++||.+..+.  .+.+|++++..+|++||+.+++.|+++
T Consensus       280 ~~g~~~-~~~~~~~rs~~ivsf~~~~~~-~~~-~~~~~~L~~~gI~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~  356 (361)
T 3m5u_A          280 SNGFYK-GHADKKDRSLMNVSFNIAKNK-DLE-PLFVKEAEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKEF  356 (361)
T ss_dssp             STTSEE-ESSCGGGBCSSEEEEEESSCT-THH-HHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCeee-ccCCHHHcCCeEEEEECCCch-hhh-HHHHHHHHHCCCEEecCCCccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence            531100 00011 112345677766310 233 478889999999987753  256999999999999999999999998


Q ss_pred             Hh
Q 021893          277 LE  278 (306)
Q Consensus       277 l~  278 (306)
                      .+
T Consensus       357 ~~  358 (361)
T 3m5u_A          357 QG  358 (361)
T ss_dssp             HH
T ss_pred             HH
Confidence            87

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.34  E-value=5.7e-11  Score=113.87  Aligned_cols=228  Identities=11%  Similarity=0.044  Sum_probs=144.9

Q ss_pred             CHHHHHHHHHhcCCc--EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-ccc--CCC
Q 021893           46 DITALEKIFKESGDQ--IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDW--EEV  120 (306)
Q Consensus        46 d~~~le~~i~~~~~~--~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~--~~~  120 (306)
                      |++.||++++++++.  +++++++.+ +++|.+.+    +++|.++|++++  +++||+|++....+..+. ...  .+.
T Consensus       281 d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d----l~~I~ela~~~~--livDEAH~~~~~f~~~~~~~~al~~g~  353 (715)
T 3n75_A          281 QHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN----TDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGR  353 (715)
T ss_dssp             SHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC----HHHHHHHCCCSE--EEEECTTCTTGGGSGGGTTSSTTSSSC
T ss_pred             CHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC----HHHHHHHhCcCc--EEEccccccccccCCccccccccccCc
Confidence            899999999976421  224555444 78898888    999999998774  799999984211122111 111  111


Q ss_pred             CCc-----EEEecccccCCcccceeeEeCHHHH-hhcCCC-CccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHH
Q 021893          121 RPD-----MVILGKALGGGVIPVSAVLADKEVM-LCIQPG-EHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLG  190 (306)
Q Consensus       121 ~~d-----~~s~sK~~~~G~~~~g~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~  190 (306)
                      .+|     +.|++|++++-- ..|++.++.++. +.+... ....+.+.+.+.+++..++++.+..   +++.+++.++.
T Consensus       354 ~aD~vii~~~S~hKtL~glt-qgs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a  432 (715)
T 3n75_A          354 VEGKVIYETQSTHKLLAAFS-QASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERA  432 (715)
T ss_dssp             CTTCEEEEEECHHHHSSCCT-TCEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEEecccccccCCC-CeeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence            244     347789987532 456677754421 111111 1223445677888888889888763   45789999999


Q ss_pred             HHHHHHHHHHHhhCCCceeeEEE-------------------------ee------eEEEEEEecCC-------ChhhHH
Q 021893          191 EELRQHLFKIQQQFPNYVKEVRG-------------------------RG------LFNAVEFDKTA-------LPVSAY  232 (306)
Q Consensus       191 ~~l~~~L~~~~~~~~~~~~~~~~-------------------------~g------~~~~i~~~~~~-------~~~~~~  232 (306)
                      +++++.|+++....+++...+.+                         .+      .=+.+..+...       .+..+.
T Consensus       433 ~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~G~~~~~Gi~g~  512 (715)
T 3n75_A          433 IKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKDGTMSDFGIPAS  512 (715)
T ss_dssp             HHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEEECSCBCTTSCBCSSCCCHH
T ss_pred             HHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEEEcCCCCCCCccccCCCcHH
Confidence            99999999986421111101000                         00      11122222110       134567


Q ss_pred             HHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          233 DICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       233 ~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      .+.+.|.++||.+.-.+...+-+.++...++++++.++++|.++-+ .+.
T Consensus       513 ~~~~~L~~~~I~~E~~d~~~vl~l~s~g~~~~~~~~L~~aL~~~~~-~~~  561 (715)
T 3n75_A          513 IVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKR-AFD  561 (715)
T ss_dssp             HHHHHHHHTTCCCSEEETTEEEEECCTTCCHHHHHHHHHHHHHHHH-HHH
T ss_pred             HHHHHHHHCCCEEEecCCCcEEEEeCCCCCHHHHHHHHHHHHHHHH-Hhh
Confidence            8899999999999988888888888889999999999999987765 443

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=98.86  E-value=1.1e-07  Score=85.30  Aligned_cols=214  Identities=14%  Similarity=0.122  Sum_probs=133.1

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |.+.++++.+++  ++++|++-....  ....+    .++++++|++.|.+|++|-+|. |+...|. ++.+ +.. .|+
T Consensus       191 Dyd~~~~~A~~~--kPklIi~G~SaY--~r~id----~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~-~psP-~~~-ADv  259 (490)
T 3ou5_A          191 DYNQLALTARLF--RPRLIIAGTSAY--ARLID----YARMREVCDEVKAHLLADMAHISGLVAAKV-IPSP-FKH-ADI  259 (490)
T ss_dssp             CHHHHHHHHHHH--CCSEEEECCSSC--CSCCC----HHHHHHHHHHHTCEEEEECGGGHHHHHTTS-SCCG-GGT-CSE
T ss_pred             cHHHHHHHHhhc--CCCeEEECCccC--ccccC----HHHHHHHHhhcccEEEechhhhhhhhcccc-cCCc-ccc-ceE
Confidence            789999999986  577777755332  23556    9999999999999999999996 6643343 2222 222 588


Q ss_pred             EEec--ccccCCcccceeeEeCHH---------------HHhhcCCCCccCCCCCCHH-HHHHHHHHHHHHhh---ccHH
Q 021893          125 VILG--KALGGGVIPVSAVLADKE---------------VMLCIQPGEHGSTFGGNPL-ASAVAIASLDVIRD---EKLA  183 (306)
Q Consensus       125 ~s~s--K~~~~G~~~~g~~~~~~~---------------~~~~~~~~~~~~~~~~~~~-~~~aa~~al~~~~~---~~~~  183 (306)
                      ++.+  |.|.|.  |-|.+..+++               +.+++......+...++-+ .+++...++....+   .++.
T Consensus       260 VTtTTHKTLrGP--rGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya  337 (490)
T 3ou5_A          260 VTTTTHKTLRGA--RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYS  337 (490)
T ss_dssp             EEEESSSTTCSC--SCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred             EeccccccccCC--CceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHH
Confidence            7655  999743  5666777652               2222221111111122222 22232233444333   3467


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----cC-----CCCEEE
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----PT-----HDTIVR  254 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~-----~~~~lR  254 (306)
                      +++.++.+.|.+.|.+.+..    +..-.-...++.+++.+.  +....+..+.|-+.||.+-    |.     .+..||
T Consensus       338 ~qVv~NAkaLA~~L~~~G~~----vvsGgTdnHlvLvDl~~~--g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiR  411 (490)
T 3ou5_A          338 LQVLKNARAMADALLERGYS----LVSGGTDNHLVLVDLRPK--GLDGARAERVLELVSITANKNTCPGDRSAITPGGLR  411 (490)
T ss_dssp             HHHHHHHHHHHHHHHHTTCE----EGGGSCSSSEEEEECGGG--TCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEE
T ss_pred             HHHHHHHHHHHHHHHhCCCe----eecCCCCceEEEEecccc--CCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeE
Confidence            88888888888888887522    111122445566666542  3456667777778898875    22     345799


Q ss_pred             EeCC----CCCCHHHHHHHHHHHHHHHh
Q 021893          255 LTPP----LSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       255 i~~~----~~~t~~~i~~~~~~l~~~l~  278 (306)
                      |..+    ....++|++++.+.|.+++.
T Consensus       412 iGTpa~TtRG~~e~dm~~IA~~I~~~l~  439 (490)
T 3ou5_A          412 LGAPALTSRQFREDDFRRVVDFIDEGVN  439 (490)
T ss_dssp             EESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             ECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            9865    35678899998888888775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	306
d2byla1	404	c.67.1.4 (A:36-439) Ornithine aminotransferase {Hu	2e-79
d1z7da1	404	c.67.1.4 (A:7-410) Ornithine aminotransferase {Pla	1e-77
d1vefa1	387	c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine a	4e-69
d1sffa_	425	c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GA	1e-57
d2gsaa_	427	c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase	1e-48
d1s0aa_	429	c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxonona	1e-44
d1zoda1	431	c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {P	5e-34
d1ohwa_	461	c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GA	2e-29
d2v1pa1	467	c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptop	5e-16
d1ax4a_	465	c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanas	3e-13
d1m6sa_	343	c.67.1.1 (A:) Low-specificity threonine aldolase {	2e-12
d2z67a1	434	c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (	5e-05
d1v72a1	345	c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Ps	8e-04

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 404

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  244 bits (624), Expect = 2e-79
 Identities = 134/271 (49%), Positives = 186/271 (68%), Gaps = 6/271 (2%)

Query: 7   SCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLF 66
              G F GRTL+AIS S D  +  GFGP +PG   + + D+ ALE+  ++    +A F+ 
Sbjct: 137 FAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQD--PNVAAFMV 194

Query: 67  EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVI 126
           EPIQGEAGV++P  GYL  VR+LC+++ +L IADEIQ+GLAR+GR LA D+E VRPD+V+
Sbjct: 195 EPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIVL 254

Query: 127 LGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERS 186
           LGKAL GG+ PVSAVL D ++ML I+PGEH ST+GGNPL   VAIA+L+V+ +E LAE +
Sbjct: 255 LGKALSGGLYPVSAVLCDDDIMLTIKPGEHFSTYGGNPLGCRVAIAALEVLEEENLAENA 314

Query: 187 AHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK 246
             LG  LR  L K+     + V  VRG+GL NA+   +T     A+ +CL++++ G+LAK
Sbjct: 315 DKLGIILRNELMKLPS---DVVTAVRGKGLLNAIVIKETK-DWDAWKVCLRLRDNGLLAK 370

Query: 247 PTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           PTH  I+R  PPL I  +EL+E  + ++  +
Sbjct: 371 PTHGDIIRFAPPLVIKEDELRESIEIINKTI 401

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]} Length = 404

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

 Score =  240 bits (613), Expect = 1e-77
 Identities = 124/278 (44%), Positives = 180/278 (64%), Gaps = 5/278 (1%)

Query: 1   MQAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQ 60
             A IV C   F GRTL  IS S   +    FGP  P   KV + D+ ALE+  K     
Sbjct: 129 NMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELK--DPN 186

Query: 61  IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV 120
           +  F+ EPIQGEAGVI+P D YL+ V D+C KYN+L +ADE+Q+GL R+G++L      V
Sbjct: 187 VCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNV 246

Query: 121 RPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE 180
           +PD+++LGKAL GG  P+SAVLA+ ++ML I+PGEHGST+GGNPLA+++ + +L+V+ +E
Sbjct: 247 KPDVILLGKALSGGHYPISAVLANDDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINE 306

Query: 181 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKE 240
           KL E +  LG    ++L +  +     V++VRG+GL  A+EF      V+  DICLK+KE
Sbjct: 307 KLCENAEKLGGPFLENLKRELKDSKI-VRDVRGKGLLCAIEFKNE--LVNVLDICLKLKE 363

Query: 241 RGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
            G++ +  HD  +RLTPPL I+  +L E ++ +   ++
Sbjct: 364 NGLITRDVHDKTIRLTPPLCITKEQLDECTEIIVKTVK 401

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]} Length = 387

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

 Score =  218 bits (555), Expect = 4e-69
 Identities = 90/273 (32%), Positives = 146/273 (53%), Gaps = 11/273 (4%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGF 64
            V+    F GRT+ ++S++ + +    F PL+     + + D+ AL++      ++ A  
Sbjct: 125 FVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAV---DEETAAV 181

Query: 65  LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDM 124
           + EP+QGE GV      +L+A R++  +   L+I DEIQ+G+ R+G+  A +   + PD+
Sbjct: 182 ILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDI 241

Query: 125 VILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAE 184
           + L KALGGG +P+   +  +EV   +  G HG+TFGGNPLA A  +A++  +   +L E
Sbjct: 242 LTLAKALGGG-VPLGVAVMREEVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWE 300

Query: 185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 244
           R+A LG    + L  I       ++EVRG GL   +E  + A P     I    KE  +L
Sbjct: 301 RAAELGPWFMEKLRAIPS---PKIREVRGMGLMVGLELKEKAAP----YIARLEKEHRVL 353

Query: 245 AKPTHDTIVRLTPPLSISSNELQEGSKALHDVL 277
           A     T++R  PPL I   +L+   +A+  VL
Sbjct: 354 ALQAGPTVIRFLPPLVIEKEDLERVVEAVRAVL 386

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]} Length = 425

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

 Score =  188 bits (479), Expect = 1e-57
 Identities = 74/293 (25%), Positives = 139/293 (47%), Gaps = 22/293 (7%)

Query: 6   VSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDF-------------GDITALEK 52
           ++  G +HGRT   ++++           L+PGH+                         
Sbjct: 131 IAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIF 190

Query: 53  IFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM 112
               + + IA  + EP+QGE G       +++ +R LC ++ I++IADE+QSG  R+G +
Sbjct: 191 KNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTL 250

Query: 113 LASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIA 172
            A +   V PD+    K++ GG  P++ V    EVM  + PG  G T+ GNP+A   A+ 
Sbjct: 251 FAMEQMGVAPDLTTFAKSIAGG-FPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALE 309

Query: 173 SLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF-----DKTAL 227
            L V   E L +++  LG++L+  L  I ++ P  + +VRG G   A+E           
Sbjct: 310 VLKVFEQENLLQKANDLGQKLKDGLLAIAEKHP-EIGDVRGLGAMIAIELFEDGDHNKPD 368

Query: 228 PVSAYDICLKMKERGIL--AKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
                +I  + +++G++  +   +  ++R+  PL+I   ++++G + +    +
Sbjct: 369 AKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCFD 421

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]} Length = 427

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

 Score =  165 bits (419), Expect = 1e-48
 Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 25/294 (8%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG--------HLKVDFGDITALEKIFKE 56
           I+   GC+HG     +  +    A  G  P  PG         L   + D+ A++ +F E
Sbjct: 137 IIKFEGCYHGHADMFLVKAGSGVATLGL-PSSPGVPKKTTANTLTTPYNDLEAVKALFAE 195

Query: 57  SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASD 116
           +  +IAG + EPI G +G I+P  G+L+ +R++  +++ L++ DE+ +G  R       +
Sbjct: 196 NPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGF-RIAYGGVQE 254

Query: 117 WEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE---HGSTFGGNPLASAVAIAS 173
              V PD+  LGK +GGG +PV A    +E+M  + P        T  GNPLA    I +
Sbjct: 255 KFGVTPDLTTLGKIIGGG-LPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKT 313

Query: 174 LDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD---------K 224
           L+++R     E    + + L   L  I Q+  +     +  G+F     +         K
Sbjct: 314 LELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAK 373

Query: 225 TALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
            +           M E+GI   P+          L+ +  ++     A   V+ 
Sbjct: 374 KSDLQKFSRFHRGMLEQGIYLAPSQF--EAGFTSLAHTEEDIDATLAAARTVMS 425

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]} Length = 429

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

 Score =  155 bits (392), Expect = 1e-44
 Identities = 85/292 (29%), Positives = 136/292 (46%), Gaps = 24/292 (8%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRGFG------------PLLPGHLKVDFGDITALEK 52
            ++    +HG T  A+S+   + ++                P      + D  D+    +
Sbjct: 137 FLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFAR 196

Query: 53  IFKESGDQIAGFLFEPIQGEAGV-IIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR 111
           +      +IA  + EPI   AG   +    +LK +R +C +  IL+IADEI +G  R+G+
Sbjct: 197 LMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGK 256

Query: 112 MLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGE-----HGSTFGGNPLA 166
           + A +  E+ PD++ LGKAL GG + +SA L  +EV   I  GE     HG TF GNPLA
Sbjct: 257 LFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLA 316

Query: 167 SAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA 226
            A A ASL ++      ++ A +  +LR+ L   +      V +VR  G    VE     
Sbjct: 317 CAAANASLAILESGDWQQQVADIEVQLREQLAPARD--AEMVADVRVLGAIGVVETTH-- 372

Query: 227 LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
            PV+   +     E+G+  +P    I  L PP  I   +LQ  + A++  ++
Sbjct: 373 -PVNMAALQKFFVEQGVWIRPFGKLI-YLMPPYIILPQQLQRLTAAVNRAVQ 422

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]} Length = 431

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

 Score =  126 bits (317), Expect = 5e-34
 Identities = 72/240 (30%), Positives = 117/240 (48%), Gaps = 11/240 (4%)

Query: 49  ALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR 108
           A + I ++S   +A F+ EPI    G+I  PDGY+ A++  C    +L+I DE Q+G+ R
Sbjct: 190 AFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGR 249

Query: 109 SGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM-LCIQPGEHGSTFGGNPLAS 167
           +G M A   + V PD++ L K LG G+   + V +               +T   +PL +
Sbjct: 250 TGTMFACQRDGVTPDILTLSKTLGAGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPA 309

Query: 168 AVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF----- 222
           AV +  LDV++ + L  R+  +G+ LR+ L  + ++F   + +VRGRGL   VE      
Sbjct: 310 AVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFD-CIGDVRGRGLLLGVEIVKDRR 368

Query: 223 DKTALPVSAYDICLKMKERG----ILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
            K         I  +    G    I+  P    + R+ PPL++S +E+  G   L   +E
Sbjct: 369 TKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIE 428

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]} Length = 461

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  114 bits (285), Expect = 2e-29
 Identities = 58/297 (19%), Positives = 111/297 (37%), Gaps = 32/297 (10%)

Query: 5   IVSCCGCFHGRTLAAISMSCDNEAIRG---------------------FGPLLPGHLKVD 43
           I+S  G FHGRT+  ++ +      +                      F           
Sbjct: 172 ILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARC 231

Query: 44  FGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQ 103
             ++  L   +++    +AG + EPIQ E G     D + + +RD+  K+    + DE+Q
Sbjct: 232 LEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQ 291

Query: 104 S--GLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG 161
           +  G             +   D++   K +  G          KE      P    +T+ 
Sbjct: 292 TGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTGGFF------HKEEFRPNAPYRIFNTWL 345

Query: 162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 221
           G+P  + +    +++I+ E L   +AH G+ L   L  +Q ++P ++  VRGRG F + +
Sbjct: 346 GDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSFD 405

Query: 222 FDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE 278
               ++      +    + +G++     D  +R  P L    +          D+L 
Sbjct: 406 TPDESI---RNKLISIARNKGVMLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSDILA 459

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]} Length = 467

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

 Score = 75.7 bits (185), Expect = 5e-16
 Identities = 39/301 (12%), Positives = 83/301 (27%), Gaps = 24/301 (7%)

Query: 3   AIIVSCCGCFHGRTLAAISMS---CDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESG- 58
           + +V+    F   T     ++     N  I+        +      D+  LE+  +E G 
Sbjct: 122 SKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGP 181

Query: 59  DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS------GLARSGRM 112
           + +   +       AG        LKA+  +  KY+I ++ D  +          R    
Sbjct: 182 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEY 241

Query: 113 LASDWEEVRPDMVIL--------GKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNP 164
                E++  +             K     +  +  +  D    +  +         G P
Sbjct: 242 KDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFP 301

Query: 165 L---ASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE 221
                   A+  L V   + +            Q+L    ++     ++  G   F    
Sbjct: 302 TYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQQAGGHAAFVDAG 361

Query: 222 FDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL 281
             K    + A     +     +         V +   L     +  +      ++L L +
Sbjct: 362 --KLLPHIPADQFPAQALACELYKV-AGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTI 418

Query: 282 P 282
           P
Sbjct: 419 P 419

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]} Length = 465

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

 Score = 67.7 bits (164), Expect = 3e-13
 Identities = 51/317 (16%), Positives = 95/317 (29%), Gaps = 49/317 (15%)

Query: 8   CCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG----DITALEKIFKESGDQIAG 63
               FH  T AA       +AI             D      DI  L++   + G     
Sbjct: 125 FISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIV 184

Query: 64  FLFEPIQGEAGVIIPPD-GYLKAVRDLCSKYNILMIADEIQS------GLARSGRMLASD 116
            +   +   +    P     LK V ++  ++ I ++ D  +         AR  +   + 
Sbjct: 185 AIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNAT 244

Query: 117 WEEVRPDMVILGKALG-----GGVIPVSAVLADKEVMLC-------IQPGEHGSTFGGNP 164
            +EV  DM     AL        ++ +  ++A ++             P E   T+GG  
Sbjct: 245 IKEVIFDMYKYADALTMSAKKDPLLNIGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLA 304

Query: 165 LASAVAI-ASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223
                A+   L+   +E+         + L   L   ++          G  +F   +  
Sbjct: 305 GRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRL---REAGIPIQYPTGGHAVFVDCKKL 361

Query: 224 KTALPVSAY----DICLKMKERGILA-----------------KPTHDTIVRLT-PPLSI 261
              +P   +     I     E G+ A                 K      +RLT      
Sbjct: 362 VPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVY 421

Query: 262 SSNELQEGSKALHDVLE 278
           +++ +   + AL  + E
Sbjct: 422 TNDHMDYIADALIGLKE 438

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]} Length = 343

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

 Score = 64.4 bits (155), Expect = 2e-12
 Identities = 35/245 (14%), Positives = 81/245 (33%), Gaps = 6/245 (2%)

Query: 34  PLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY 93
           P+   +  +D  D+    +       + +    E     +G  + P   +K +  +  ++
Sbjct: 102 PVPGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEH 161

Query: 94  NILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP 153
            I +  D  +   A     +         D V+   + G      S V+ D++ +   + 
Sbjct: 162 GINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDRDFIERARK 221

Query: 154 GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG 213
                  GG    + V  A+  +   + +              L   +  +    ++V+ 
Sbjct: 222 --ARKMLGGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEIGYSVNPEDVKT 279

Query: 214 RGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKAL 273
             +          L V+A+     ++  G+LA    DT +RL     +S N+++E     
Sbjct: 280 NMVI----LRTDNLKVNAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEALNIF 335

Query: 274 HDVLE 278
             +  
Sbjct: 336 EKLFR 340

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]} Length = 434

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

 Score = 42.2 bits (98), Expect = 5e-05
 Identities = 24/210 (11%), Positives = 56/210 (26%), Gaps = 10/210 (4%)

Query: 46  DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG 105
            +  +E   K+  +                    D  +  +  +C  Y+I  I +   + 
Sbjct: 195 PVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD--IVEIAKICENYDIPHIINGAYAI 252

Query: 106 LARSGRMLASDWEEVRPDMVILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGN 163
                        + R D V+    K L   +        D E +  I     G      
Sbjct: 253 QNNYYLEKLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEISLSYPGRASATP 312

Query: 164 PLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD 223
            + + V++ S+      +L +   +  + L + L  + ++      +V            
Sbjct: 313 VVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVESPIASCIS--- 369

Query: 224 KTALPVSAYDICLKMKERGILAKPTHDTIV 253
              +     +I  K+    +          
Sbjct: 370 ---VNSDPVEIAAKLYNLRVTGPRGIKKTD 396

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]} Length = 345

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

 Score = 38.3 bits (87), Expect = 8e-04
 Identities = 21/198 (10%), Positives = 49/198 (24%), Gaps = 6/198 (3%)

Query: 76  IIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGV 135
            I     ++A+ D+C   ++ +  D  +   A      +      +  +  L        
Sbjct: 150 SIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNG 209

Query: 136 IPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQ 195
           +  +  +      L  +        G          A +D    + L  R+A       Q
Sbjct: 210 VLAAEAIVLFNTSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQ 269

Query: 196 HLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRL 255
            L +  +                    D   +        L     G         +VR 
Sbjct: 270 RLAQGLEGLGGVEVLGGTEANILFCRLDSAMIDA------LLKAGFGFYHDRWGPNVVRF 323

Query: 256 TPPLSISSNELQEGSKAL 273
               + ++ ++      +
Sbjct: 324 VTSFATTAEDVDHLLNQV 341

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	306
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	100.0
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	100.0
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	100.0
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	100.0
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	100.0
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	100.0
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	100.0
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	100.0
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	99.93
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	99.93
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	99.92
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.91
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.9
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	99.9
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	99.9
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	99.9
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	99.89
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.89
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	99.89
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	99.88
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	99.88
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	99.88
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	99.88
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	99.88
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	99.88
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	99.87
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	99.87
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	99.86
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	99.86
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	99.83
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.81
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.8
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.8
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	99.79
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.78
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	99.78
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	99.78
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	99.77
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.76
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.74
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.74
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	99.73
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	99.73
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.71
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.7
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.69
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.69
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	99.69
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.68
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.68
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	99.67
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.65
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.64
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.61
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.6
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.59
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.58
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.55
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.53
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.5
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.49
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.48
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.46
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.46
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.42
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	99.37
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.34
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.34
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	99.31
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.31
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.29
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	99.27
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.19
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	99.17
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	99.16
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	99.04
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	99.04
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	99.03
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	98.99
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	98.9
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	98.85
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	98.85
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	98.84
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	98.83
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	98.76
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	98.75

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-45  Score=327.36  Aligned_cols=273  Identities=50%  Similarity=0.896  Sum_probs=253.4

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+|+.+.++|||.+..+++.++++.....+.|..+++..+|++|++++|+.+++  +++++|++||+++++|.++++++
T Consensus       132 ~~~i~~~~~~~hg~t~~~~~~~~~~~~~~~~~p~~~~~~~~p~~d~~~l~~~l~~--~~iAaviiEPi~g~~G~~~~~~~  209 (404)
T d2byla1         132 KAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQD--PNVAAFMVEPIQGEAGVVVPDPG  209 (404)
T ss_dssp             CCEEEEETTCCCCCSHHHHTTCCCHHHHTTSCSCCTTEEEECTTCHHHHHHHHTS--TTEEEEEECSSBTTTTSBCCCTT
T ss_pred             cccccccCCCccccccceeccCCCcccccCCCCCCCCeeEecccCHHHHHHhcCC--CCeEEEEECCccCCCCCccCCHH
Confidence            5689999999999999999999998888999999999999999999999999975  57999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      ||++|+++|++||++||+||+++||||.|..+.++++++.||+++++|+++||+.++|.+++++++++.+.+..+++||.
T Consensus       210 ~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~a~~~~gv~PDi~~~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~T~~  289 (404)
T d2byla1         210 YLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHFSTYG  289 (404)
T ss_dssp             HHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTSCTTSSCCSST
T ss_pred             HHHHHHHHHHhcCeEEEeeccccccccccccchhhhcCCCCCEEEECchhhCCCccceeeeechhhhhccCCCCCCcCCC
Confidence            99999999999999999999999999999999999999999999999999988549999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      +|+++++++.++|+.+.++++.++.+++.+++++.|+++..   +.+..+++.|++..+.+.+.. .....++.+.|+++
T Consensus       290 gnpl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~~---~~i~~vRg~Gl~~~i~~~~~~-~~~~~~~~~~l~~~  365 (404)
T d2byla1         290 GNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLPS---DVVTAVRGKGLLNAIVIKETK-DWDAWKVCLRLRDN  365 (404)
T ss_dssp             TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTSCT---TTEEEEEEETTEEEEEECCCS-SCCHHHHHHHHHHT
T ss_pred             cCHHHHHHHHHHHHHHHhcCchhhhhHhhHHHHHHHHhhcc---ccceeeeecccEEEEEEecCC-chhHHHHHHHHHhC
Confidence            99999999999999999999999999999999999998743   367789999999999887533 34567899999999


Q ss_pred             CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      |+++.+.+.+.+|++|++.+|+++|++++++|++++. ++
T Consensus       366 Gvl~~~~~~~~i~l~PpL~it~~~id~~~~~l~~al~-~f  404 (404)
T d2byla1         366 GLLAKPTHGDIIRFAPPLVIKEDELRESIEIINKTIL-SF  404 (404)
T ss_dssp             TEECEEEETTEEEECCCTTCCHHHHHHHHHHHHHHHH-TC
T ss_pred             CeEEecCCCCEEEEECCcCCCHHHHHHHHHHHHHHHH-cC
Confidence            9999987788999999999999999999999999997 53

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4.8e-44  Score=320.67  Aligned_cols=266  Identities=34%  Similarity=0.565  Sum_probs=247.6

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+||.|.++|||.+..++++++.+.....+.|..+++.++|+||.+.|++.++   +++++|++||+++++|.+.++++
T Consensus       122 r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~~~p~~d~~~l~~~~~---~~iAavi~EPi~g~~G~~~~~~~  198 (387)
T d1vefa1         122 RKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVD---EETAAVILEPVQGEGGVRPATPE  198 (387)
T ss_dssp             CCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCC---TTEEEEEECSEETTTTSEECCHH
T ss_pred             cceecccccCCCCCccceEeccCCccccCCCCCCCCCceEeCCCCHHHHHHhcC---CCeEEEEEECCCCCCCCccCCHH
Confidence            689999999999999999999998888888889988899999999999999887   57999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      ||++|+++|++||++||+||+++||||.|..+.++++++.||+++++|+++||+ +++.+.+.+++++.+.+..+++||+
T Consensus       199 ~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~~~~~~~v~PDi~~~gK~l~gG~-~~~~~~~~~~~~~~~~~~~~g~T~~  277 (387)
T d1vefa1         199 FLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDILTLAKALGGGV-PLGVAVMREEVARSMPKGGHGTTFG  277 (387)
T ss_dssp             HHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTS-SCEEEEEEHHHHHTSCTTSSCCSST
T ss_pred             HHHHHHHHHHHcCceEEecccccccCccCCCcccccCCcCCceeeecccCCCCc-cccccccceeeeeccccCCccccCC
Confidence            999999999999999999999999999999999999999999999999999999 9999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      +|+++++++.++++.+.++++.++++++.+++++.|+++..   +.+..+++.|+++.+++.+    .....+.+.++++
T Consensus       278 gnPla~aaa~a~L~~l~~~~~~~~v~~~g~~l~~~L~~l~~---~~v~~vrg~Gl~~~ie~~~----~~~~~~~~~~~~~  350 (387)
T d1vefa1         278 GNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIPS---PKIREVRGMGLMVGLELKE----KAAPYIARLEKEH  350 (387)
T ss_dssp             TCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSCC---TTEEEEEEETTEEEEEESS----CSHHHHHHHHHHH
T ss_pred             CCcchhhhcccchhhcccccccchHhhhhHHHHHHHHhcCC---CceEEEeecceEEEEEEeC----CchHHHHHHHHHC
Confidence            99999999999999999988999999999999999998743   3577899999999999975    3356778888999


Q ss_pred             CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      |+++.+.+++.+|++|++.+|+++|++++++|+++|.
T Consensus       351 g~l~~~~g~~~ir~~Ppl~it~~~ld~~~~~i~~aLS  387 (387)
T d1vefa1         351 RVLALQAGPTVIRFLPPLVIEKEDLERVVEAVRAVLA  387 (387)
T ss_dssp             CEECEESSTTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred             CCeEEecCCCEEEEECCccCCHHHHHHHHHHHHHHhC
Confidence            9998888889999999999999999999999999874

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=100.00  E-value=2.7e-42  Score=311.40  Aligned_cols=274  Identities=45%  Similarity=0.837  Sum_probs=230.9

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+|+.+.++|||.+......++....+..+.|..+.+..+|+++.+.+++.+..  +++++|++||+++++|.+.++++
T Consensus       130 ~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~iAavi~EPi~g~~G~~~~~~~  207 (404)
T d1z7da1         130 MAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKD--PNVCAFIVEPIQGEAGVIVPSDN  207 (404)
T ss_dssp             CCEEEEETTC--------------------------CEEEECTTCHHHHHHHHTS--TTEEEEEECSSBSTTTSBCCCTT
T ss_pred             ccccccccccCCCCcccccccccccccccCCCCCCccccccccchHHHHHHHhcC--CCEEEEEEEEEcCCCCCccCCHH
Confidence            3589999999999999999999988888888888888999999999999988874  68999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCCCCccCCCC
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFG  161 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (306)
                      ||++|+++|++||++||+||+++||||.|..+.++++++.||+++++|++++|+.++|.+++++++++.+.+..+++||.
T Consensus       208 fl~~l~~lc~~~g~llI~DEV~tGfgRtG~~~~~e~~gv~PDivt~gK~l~gG~~p~~~v~~~~~i~~~~~~~~~~~T~~  287 (404)
T d1z7da1         208 YLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKPGEHGSTYG  287 (404)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTCCTTCCCCTTT
T ss_pred             HHHHHHHHHHHcCCEEEEEcCccCCCcccccccccccCCCCCEEEEcccccCCCCCcccccchHHHHccCCCCCcCcCCC
Confidence            99999999999999999999999999999999999999999999999999988449999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC
Q 021893          162 GNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER  241 (306)
Q Consensus       162 ~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~  241 (306)
                      +|+++++++.++++.+.++++.+++.+..+.+.+.+++....++ .+..+++.|+++.+.+.++  .....++.+.|+++
T Consensus       288 gnpl~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~v~~vrg~Gl~~~i~~~~~--~~~~~~~~~~l~~~  364 (404)
T d1z7da1         288 GNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSK-IVRDVRGKGLLCAIEFKNE--LVNVLDICLKLKEN  364 (404)
T ss_dssp             TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCT-TEEEEEEETTEEEEEECTT--TCCHHHHHHHHHHT
T ss_pred             CCcchhhhhhhhhhhhhcchhhhhhccchhHHHHHHHHHHhcCC-CeEEEEeeCcEEEEEEcCC--cccHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999888874 8889999999999999863  24466789999999


Q ss_pred             CceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          242 GILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       242 Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      |+++.+.+.+.|||+|++.+|+++|++++++|+++++ ++
T Consensus       365 Gl~~~~~~~~~ir~~Ppl~it~~~id~~~~~l~~alk-~~  403 (404)
T d1z7da1         365 GLITRDVHDKTIRLTPPLCITKEQLDECTEIIVKTVK-FF  403 (404)
T ss_dssp             TEECCEETTTEEEECCCTTCCHHHHHHHHHHHHHHHH-HH
T ss_pred             CeEEecCCCCEEEEECCcCCCHHHHHHHHHHHHHHHH-hh
Confidence            9999998889999999999999999999999999998 75

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.5e-41  Score=308.62  Aligned_cols=279  Identities=28%  Similarity=0.575  Sum_probs=239.4

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCc-ccccCC----------CHHHHHHHHH--hcCCcEEEEEEcc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH-LKVDFG----------DITALEKIFK--ESGDQIAGFLFEP   68 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----------d~~~le~~i~--~~~~~~~~v~v~~   68 (306)
                      |++||.|.++|||.+..++++++.......+.+..+.. ...+++          .....++.+.  .+..++++|++||
T Consensus       127 r~~ii~~~~~yHG~t~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vaavi~EP  206 (425)
T d1sffa_         127 RSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEP  206 (425)
T ss_dssp             CCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECS
T ss_pred             ccceEeecCCCcCccccchhhcCCCCcccCCcccccCCccccCCccccccccchhhHHHHHHHHHhcccccceEEEEecC
Confidence            68999999999999999999998766555554444443 222221          0112222222  2336799999999


Q ss_pred             ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893           69 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM  148 (306)
Q Consensus        69 ~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~  148 (306)
                      +++++|.+.++++||++|+++|++||++||+||+++|++|.|..+.++++++.||+++++|+++||+ |+|.++++++++
T Consensus       207 i~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gR~g~~~a~~~~gv~PDi~~~gK~l~gG~-P~~av~~~~~i~  285 (425)
T d1sffa_         207 VQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGF-PLAGVTGRAEVM  285 (425)
T ss_dssp             BCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGGTSS-CCEEEEEEHHHH
T ss_pred             ccCCCCcccCCHHHHHHHHHHHHHcCceEEeccccccCCCcchhhHHHhcCCCccceecccccCCCc-ceEEEEEcHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999 999999999999


Q ss_pred             hhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC--
Q 021893          149 LCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA--  226 (306)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~--  226 (306)
                      +.+.+..+++||.+|+++++++.++|+.+.++++.++++++.+++++.|+++...++ .+..+++.|+++.+.+..+.  
T Consensus       286 ~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~-~v~~vrg~Gl~~~i~f~~~~~~  364 (425)
T d1sffa_         286 DAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHP-EIGDVRGLGAMIAIELFEDGDH  364 (425)
T ss_dssp             TTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTCT-TEEEEEEETTEEEEEEBGGGCT
T ss_pred             HhhCCCCCCCCCCcCHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhHhhCC-ceEEEEccccEEEEEEeccCcc
Confidence            999999999999999999999999999999999999999999999999999998885 78899999999999986422  


Q ss_pred             ---ChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          227 ---LPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       227 ---~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                         .......+.+.|+++|+++.+.+  .+.+|++|++.+|++||++++++|+++++ ++++
T Consensus       365 ~~~~~~~~~~~~~~l~~~Gvl~~~~g~~~n~i~~~PpL~it~~eid~~l~~l~~al~-eikk  425 (425)
T d1sffa_         365 NKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCFD-EAKQ  425 (425)
T ss_dssp             TSBCHHHHHHHHHHHHHTTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHHH-HHCC
T ss_pred             CCccHHHHHHHHHHHHHCCCEEeccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-HhcC
Confidence               12335678999999999988753  57899999999999999999999999999 8764

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.9e-41  Score=306.26  Aligned_cols=273  Identities=30%  Similarity=0.490  Sum_probs=236.4

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCC-c-----------ccccCCCHHHHHHHHHhcCCcEEEEEEccc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-H-----------LKVDFGDITALEKIFKESGDQIAGFLFEPI   69 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-~-----------~~~~~~d~~~le~~i~~~~~~~~~v~v~~~   69 (306)
                      +.|||.|+++|||.+.++++++++......+.+.... .           ...+.++++.+++.+.++++++++|++||+
T Consensus       134 ~~~ii~~~~~yHG~t~~a~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi  213 (429)
T d1s0aa_         134 RQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPI  213 (429)
T ss_dssp             CCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECSS
T ss_pred             ccEEEEecCCccccchhhhhhcCCccccccccCccccccccccccccccccccchhhhhhhhhhhhhcCCccceeeecce
Confidence            3689999999999999999999875554443332222 1           222234688888888888889999999998


Q ss_pred             c-CCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893           70 Q-GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM  148 (306)
Q Consensus        70 ~-~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~  148 (306)
                      . +.+|.+.++++|+++|+++|++||++||+||+++||||.|..+..+++++.||+++++|++++|+.++|.++++++++
T Consensus       214 ~~~~gg~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~~~~~~~v~PDi~~~gK~l~gG~~p~~av~~~~~i~  293 (429)
T d1s0aa_         214 VQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVA  293 (429)
T ss_dssp             EECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTSSSCCEEEEECHHHH
T ss_pred             eccCCCccCCCHHHHHHHHHHHHHcCcceehhhccccccccccccccccceecccccccccccccccccccchhhHHHHH
Confidence            7 556777889999999999999999999999999999999999999999999999999999987755999999999998


Q ss_pred             hhcCC-----CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEe
Q 021893          149 LCIQP-----GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFD  223 (306)
Q Consensus       149 ~~~~~-----~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~  223 (306)
                      +.+.+     ..+.+||.+|+++++++.++|+.+.++++.+++++..++++++|+++.. . +.+..+++.|+++.+++.
T Consensus       294 ~~~~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~L~~l~~-~-~~v~~vrg~Gl~~~~e~~  371 (429)
T d1s0aa_         294 ETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARD-A-EMVADVRVLGAIGVVETT  371 (429)
T ss_dssp             HHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGG-C-TTEEEEEEETTEEEEEES
T ss_pred             hccCCCCCcceeecCCCCCCcccchhhhccccccccccccchhhHHHHHHHHHHHHhcc-C-CceEEEeecccEEEEEec
Confidence            87654     2478899999999999999999999999999999999999999998754 3 478899999999999987


Q ss_pred             cCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          224 KTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       224 ~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .   +.....+.+.|+++|+++.+.+ +.+|++|++..|++||++++++|+++++ +.
T Consensus       372 ~---~~~~~~~~~~~~~~Gl~~~~~g-~~i~~~Ppl~it~~eid~~~~~l~~al~-e~  424 (429)
T d1s0aa_         372 H---PVNMAALQKFFVEQGVWIRPFG-KLIYLMPPYIILPQQLQRLTAAVNRAVQ-DE  424 (429)
T ss_dssp             S---CBCHHHHHHHHHHTTEECCCBT-TEEEECCCTTCCHHHHHHHHHHHHHHTS-SG
T ss_pred             C---cccHHHHHHHHHHCCcEEEecC-CEEEEeCCcCCCHHHHHHHHHHHHHHHH-hh
Confidence            5   4567789999999999999874 6999999999999999999999999998 64

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=5.5e-40  Score=300.56  Aligned_cols=270  Identities=22%  Similarity=0.394  Sum_probs=229.9

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcc----cccC--------------CCHHHHHHHHH---hcCCc
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHL----KVDF--------------GDITALEKIFK---ESGDQ   60 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--------------~d~~~le~~i~---~~~~~   60 (306)
                      +.+||.|+|+|||.|.++++++++....+.+.|......    ..++              .+.+++++.+.   .++++
T Consensus       169 ~~~Ii~~~~syHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  248 (461)
T d1ohwa_         169 DYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKT  248 (461)
T ss_dssp             CCEEEEETTCCCCSSHHHHHTCCSCHHHHTTCCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CceEEEecCCcCCCCcccccccCCcccccccccccCCcccccccccccccccccccchhhhhhHHHHHHHHHHHHhCCCc
Confidence            348999999999999999999998766665555443321    1111              12455555554   45678


Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC--CCcEEEecccccCCcccc
Q 021893           61 IAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV--RPDMVILGKALGGGVIPV  138 (306)
Q Consensus        61 ~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~--~~d~~s~sK~~~~G~~~~  138 (306)
                      +++|++||+++.+|.++++++||++|+++|++||++||+||+++||||+|..+.++++++  .||+++++|++++|+   
T Consensus       249 iAavivEPi~g~~G~~~~~~~fl~~lr~lc~~~gillI~DEV~tG~gRtG~~~~~e~~gi~~~PDiv~~gK~l~~g~---  325 (461)
T d1ohwa_         249 VAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTGG---  325 (461)
T ss_dssp             EEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTCSSTTSSSSGGGGGCCSSCCSEEEECGGGSSEE---
T ss_pred             cceeeeccccccccccCchhhHHHHHHHHHHhhCcceeccccccccccccccccccccccccCchhhhhhhcccccc---
Confidence            999999999999999999999999999999999999999999999999999998999887  599999999999776   


Q ss_pred             eeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEE
Q 021893          139 SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFN  218 (306)
Q Consensus       139 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~  218 (306)
                        ..... .+....+..+.+||.+++++++++.++++.+.++++.+++++..++++++|+++...+|..+..+++.|+++
T Consensus       326 --~~~~~-~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~i~~vrG~Gl~~  402 (461)
T d1ohwa_         326 --FFHKE-EFRPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFC  402 (461)
T ss_dssp             --EEECG-GGSCSSTTSSCCSCSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTEE
T ss_pred             --ccccc-ccccccccccccccccccccchhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEeeeeeEEE
Confidence              22332 334445567888999999999999999999999999999999999999999999988876788999999999


Q ss_pred             EEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          219 AVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       219 ~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .+++++   .....++.+.|+++|+++.+.+++.|||.|++..|+++++.++++|++++. ++
T Consensus       403 ~ie~~~---~~~~~~i~~~~~~~Gll~~~~~~~~ir~~PpL~it~~eid~~~~~l~~~l~-ef  461 (461)
T d1ohwa_         403 SFDTPD---ESIRNKLISIARNKGVMLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSDILA-DF  461 (461)
T ss_dssp             EEECSS---HHHHHHHHHHHHHTTEECEEETTTEEECCCCTTCCHHHHHHHHHHHHHHHH-TC
T ss_pred             EEEcCC---HHHHHHHHHHHHHCCeEEeeCCCCEEEEeCCcCCCHHHHHHHHHHHHHHHh-cC
Confidence            999875   456778999999999999998889999999999999999999999999998 64

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=100.00  E-value=1.2e-39  Score=295.85  Aligned_cols=273  Identities=26%  Similarity=0.424  Sum_probs=232.8

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCC--------cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCC
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG--------HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEA   73 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~   73 (306)
                      |++||.|+++|||.+.++++++++......+ |..++        ....+++|++.+|++++++++++++|++||+++++
T Consensus       134 r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~iaavi~Epi~g~~  212 (427)
T d2gsaa_         134 RDKIIKFEGCYHGHADMFLVKAGSGVATLGL-PSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNS  212 (427)
T ss_dssp             CCEEEEETTCCCCSCGGGCSSCCHHHHHTTC-CSCSSSCHHHHTTEEEECTTCHHHHHHHHTTSTTTEEEEEECSSBCSS
T ss_pred             CCeEEEEecccccCcceeeeecCCcccccCC-CCCCCCcccCccceeccCcchHHHHHHHHHhCCCCeEEEEEcCCcCCC
Confidence            6899999999999999999999865444333 33232        46778999999999999988899999999999999


Q ss_pred             CcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhhcCC
Q 021893           74 GVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQP  153 (306)
Q Consensus        74 G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~~~~  153 (306)
                      |.+.++++||++|+++|++||++||+||+++|| +.|..+.++++++.||+++++|+++||+ ++|.+++++++++.+.+
T Consensus       213 G~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~-r~g~~~~~~~~gi~PDi~~~gK~lggG~-p~~a~~~~~~i~~~~~~  290 (427)
T d2gsaa_         213 GFIVPDAGFLEGLREITLEHDALLVFDEVMTGF-RIAYGGVQEKFGVTPDLTTLGKIIGGGL-PVGAYGGKREIMQLVAP  290 (427)
T ss_dssp             SCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTCHHHHTTCCCSEEEECGGGGTTS-CCEEEEECHHHHTTBTT
T ss_pred             CCccCCHHHHHHHHHHHHHhceeeeeccccccc-eecccchHHhcCCCHHHHhhhhccCCCc-ceeeeeehHHHHHHhcc
Confidence            999999999999999999999999999999999 7799888999999999999999999999 99999999999998875


Q ss_pred             ---CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC----
Q 021893          154 ---GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA----  226 (306)
Q Consensus       154 ---~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~----  226 (306)
                         ..+.+||.+|+++++++.++++.+.++++.++++++.+++++.|+++...++ ....+.+.+.++.+.+....    
T Consensus       291 ~~~~~~~~T~~gnpla~AAala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~-~~~~v~~~ggm~~i~~~~~~v~~~  369 (427)
T d2gsaa_         291 AGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETG-HAACGGQVSGMFGFFFTEGPVHNY  369 (427)
T ss_dssp             TSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTT-CCCEEEEETTEEEEESSSCCCCSH
T ss_pred             cCCCcCCCCCCCCchhhHHHHHhhHHhhhhhHHhhhhHHHHHHHHHHHHHHhhcC-CCcEEcccCCeEEEEEeccCCCCH
Confidence               3577899999999999999999999989999999999999999999988874 55566666667666653321    


Q ss_pred             ------ChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          227 ------LPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       227 ------~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                            .......+...|+++||++.|.....  +.|+..+|++||++++++|+++++ ++
T Consensus       370 ~~~~~~d~~~~~~~~~~ll~~Gv~l~p~~~~~--~~~~l~~Te~dId~~l~al~~al~-~L  427 (427)
T d2gsaa_         370 EDAKKSDLQKFSRFHRGMLEQGIYLAPSQFEA--GFTSLAHTEEDIDATLAAARTVMS-AL  427 (427)
T ss_dssp             HHHTTSCHHHHHHHHHHHHHTTEECCSSTTSC--EECCTTCCHHHHHHHHHHHHHHHT-CC
T ss_pred             HHhhcccHHHHHHHHHHHHHCCEEECCCCCcc--eeCCCCCCHHHHHHHHHHHHHHHH-hC
Confidence                  11123467888999999998864432  346789999999999999999998 53

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=100.00  E-value=9.1e-39  Score=290.72  Aligned_cols=276  Identities=30%  Similarity=0.512  Sum_probs=233.1

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCC-----------------CHHHHHHHHH-hcCCcEEE
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFG-----------------DITALEKIFK-ESGDQIAG   63 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------d~~~le~~i~-~~~~~~~~   63 (306)
                      |++|+.|.|+|||.+.++++++++.. ...+.|..++...++.+                 +++.++..+. .+++++++
T Consensus       126 r~~i~~~~~~yHG~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAa  204 (431)
T d1zoda1         126 KYEIVGFAQSWHGMTGAAASATYSAG-RKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAA  204 (431)
T ss_dssp             CCEEEEETTCCCCSSHHHHHTCCSSC-CSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEE
T ss_pred             Ccceeecccccccccchhhccccccc-ccccCCcccCceeeeeecccccccccccchhhhhhHHHHHHHHHHhccccccc
Confidence            68999999999999999999988653 34445555554333322                 1333433333 24468999


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEe
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLA  143 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~  143 (306)
                      |++||++.++|.+.++++|+++|+++|++||++||+||+++||+|.|..+..+++++.||+++++|+++||+ +++.+++
T Consensus       205 vi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~gRtG~~~~~~~~gv~PDi~~~gK~l~gG~-p~~av~~  283 (431)
T d1zoda1         205 FIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLSKTLGAGL-PLAAIVT  283 (431)
T ss_dssp             EEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECHHHHTTS-SCEEEEE
T ss_pred             eeeccccccCCccCCCHHHHHHHHHHHHhcCceEEeccccccccccccccccccCCCCcchhcccccccccc-ccceeee
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999 9999999


Q ss_pred             CHHHHhhcC--CCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEE
Q 021893          144 DKEVMLCIQ--PGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVE  221 (306)
Q Consensus       144 ~~~~~~~~~--~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~  221 (306)
                      ++++++.+.  ...+++|+.+++++++++.++++.+.++++.++.+++.+++.+.++++...++ .+..+++.|+++.++
T Consensus       284 ~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~-~i~~vrG~Glm~~ie  362 (431)
T d1zoda1         284 SAAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFD-CIGDVRGRGLLLGVE  362 (431)
T ss_dssp             CHHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCT-TEEEEEEETTEEEEE
T ss_pred             eecchhhhhcccccccCCCCCCcchHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhhhcCC-CeEEEeecceEEEEE
Confidence            998887653  33578899999999999999999999999999999999999999999988874 888999999999998


Q ss_pred             EecCC-----ChhhHHHHHHHHHHCCcee----ccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          222 FDKTA-----LPVSAYDICLKMKERGILA----KPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       222 ~~~~~-----~~~~~~~~~~~l~~~Gi~~----~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +..+.     .......+.+.|+++|+..    .+..++.+|++|++.+|+++|++++++|+++++ ++
T Consensus       363 ~~~~~~~~~~~~~~~~~i~~~~~~~Gl~~~~~~~~~~~~~i~l~Ppl~it~~eid~~~~~l~~al~-~v  430 (431)
T d1zoda1         363 IVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIE-RA  430 (431)
T ss_dssp             EEEETTTTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHHHH-HH
T ss_pred             EecCCcccCccHHHHHHHHHHHHHhCcccCeeeecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-Hh
Confidence            85422     1223567899999999753    345678999999999999999999999999998 53

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.93  E-value=8.5e-26  Score=202.05  Aligned_cols=265  Identities=13%  Similarity=0.132  Sum_probs=184.5

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v   64 (306)
                      ..|++..|+.++-..+..++..+....-...|.|+.           ++.+|.       .|+++|++.++   ++++++
T Consensus        87 ~~i~~t~G~~~~l~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i  163 (388)
T d1gdea_          87 TEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVT---DKTRAL  163 (388)
T ss_dssp             TSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCC---TTEEEE
T ss_pred             heeeeccCcchHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHcCCEEEEeecccccCCCCCHHHHHHhCc---cCCeEE
Confidence            458888899988877777777765554444566655           233332       27899998887   568888


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-ccCCC---CCcEEEeccccc-CCcccc
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWEEV---RPDMVILGKALG-GGVIPV  138 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~~~~---~~d~~s~sK~~~-~G~~~~  138 (306)
                      +++.++|++|.. .+++.+++|.++|++||++||+||+|.++...+... +. ...+.   ...+.|+||.++ +|+ |+
T Consensus       164 ~~~~P~NPtG~~-~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl-R~  241 (388)
T d1gdea_         164 IINSPCNPTGAV-LTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGW-RL  241 (388)
T ss_dssp             EEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGG-CC
T ss_pred             EECCCcCCCCCc-CCHHHHHHHHHHHHHcCCEEEEEcCChhhhhccCCCCChhhccCCCCeEEEEeCChhhccCccc-cE
Confidence            888889999955 689999999999999999999999999875554322 11 11111   223449999998 999 99


Q ss_pred             eeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEe
Q 021893          139 SAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGR  214 (306)
Q Consensus       139 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~  214 (306)
                      ||+++++++++.+...........+.+.+.++..+++....    ....+++++....+.+.|....     .....+..
T Consensus       242 G~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~p~g  316 (388)
T d1gdea_         242 GFVAAPSWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEMG-----LPTVKPKG  316 (388)
T ss_dssp             EEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCCB
T ss_pred             EEEEeeccchhhhhhccccccccccccchhhHHHHHhhccchhHHHHHHHHHHHhhhhhhhhhhhcc-----ccccCCCc
Confidence            99999998887776554555566667776666665542211    1122333333344444443321     23344566


Q ss_pred             eeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          215 GLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       215 g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      |.++|+.+++.  ..++.++++.|+ ++||.+.|+      +++++|++  +..+++++++++++|+++++ +.+
T Consensus       317 g~fl~~~l~~~--~~~~~~~~~~ll~e~gV~v~PG~~F~~~~~~~iRis--~~~~~e~l~~al~rL~~~l~-e~k  386 (388)
T d1gdea_         317 AFYIFPRIRDT--GLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRIS--YATAYEKLEEAMDRMERVLK-ERK  386 (388)
T ss_dssp             TTEECCBCGGG--TCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEE--CCSCHHHHHHHHHHHHHHHH-HTT
T ss_pred             eEEEEEECCCC--CCCHHHHHHHHHHhCCEEEEechhhCCCCCCEEEEE--ecCCHHHHHHHHHHHHHHHH-hcC
Confidence            78888887642  346778888876 459999875      36899999  45788999999999999998 653

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=4.9e-26  Score=203.29  Aligned_cols=261  Identities=15%  Similarity=0.160  Sum_probs=179.9

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v   64 (306)
                      ..|++..|+.+|-...+.++..+.+..-...|.|+.           ++.++.       .|++.+++.++   ++++++
T Consensus        92 ~~i~it~G~~~al~~~~~~l~~~gd~vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~~~i  168 (382)
T d1b5pa_          92 EETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT---PRTKAL  168 (382)
T ss_dssp             GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCC---TTEEEE
T ss_pred             ccceecCCHHHHHHHHHHHhCCCCCEEEECCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHHHHHhCC---CCCeEE
Confidence            467778888887777666666654443333455544           122321       37888888776   578888


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccccc--CCCCCcEEEeccccc-CCcccceee
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW--EEVRPDMVILGKALG-GGVIPVSAV  141 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~--~~~~~d~~s~sK~~~-~G~~~~g~~  141 (306)
                      +++.++|+||. +.+++.+++|.++|++||+++|+||+|+++.+.+...+...  .+....+.|+||.++ +|+ |+||+
T Consensus       169 ~~~~P~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~Gl-R~G~~  246 (382)
T d1b5pa_         169 VVNSPNNPTGA-VYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGW-RIGYA  246 (382)
T ss_dssp             EEESSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGGG-CCEEE
T ss_pred             EECCCCCCcch-hCCHHHHHHHHHHHHHcCeEEEEEccccceecCCCCCCHHHcCCCCEEEEecchhhccCcHh-heEEE
Confidence            88888999995 46899999999999999999999999998766665432211  122223458999998 999 99999


Q ss_pred             EeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-----ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893          142 LADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL  216 (306)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~  216 (306)
                      ++++++++.+...........+.+.+.++..++.....     +...+.++.+.+.+.+.++..+     .....+..|.
T Consensus       247 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-----~~~~~p~gg~  321 (382)
T d1b5pa_         247 CGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTALG-----LKAVRPSGAF  321 (382)
T ss_dssp             ECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CCBCCCSBTT
T ss_pred             EECHHHHHHHHHHHHhcccCcccccccccccccccccchhHHHHHHHHHHHhhhhHHHHHHhhcC-----CeEecCCceE
Confidence            99999888775544444555566655555444432211     1233444555555555555542     3334456788


Q ss_pred             EEEEEEecCCChhhHHHHHHHHHHCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          217 FNAVEFDKTALPVSAYDICLKMKERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       217 ~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      ++|+.+.+.  ..+...+.+.|.++||.+.|+    ..+++|++  +..+++++++++++|++++
T Consensus       322 ~~~~~~~~~--~~~~~~~~~~l~e~gV~v~PG~~F~~~~~iRis--~~~~~e~l~~al~rl~~~L  382 (382)
T d1b5pa_         322 YVLMDTSPI--APDEVRAAERLLEAGVAVVPGTDFAAFGHVRLS--YATSEENLRKALERFARVL  382 (382)
T ss_dssp             EEEEECTTT--CSSHHHHHHHHHHTTEECEESGGGTCTTEEEEE--CCSCHHHHHHHHHHGGGGC
T ss_pred             EEeEeCCCC--CCCHHHHHHHHHHCCEEEEeCcccCCCCeEEEE--EcCCHHHHHHHHHHHHHhC
Confidence            889888642  346778899999999999986    46899999  4578999999999988753

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=99.92  E-value=1.1e-25  Score=201.43  Aligned_cols=265  Identities=14%  Similarity=0.133  Sum_probs=183.0

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v   64 (306)
                      ..|++..|+.++-...+.++..+.+..-...|.|+.           .+.++.       .|+++|++.++   ++++++
T Consensus        91 ~~i~it~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~l~~~~~---~~~~~~  167 (388)
T d1j32a_          91 DNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAIT---PKTKLL  167 (388)
T ss_dssp             GGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCC---TTEEEE
T ss_pred             ceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCCcHHHHHHHHHhcCeEEEEecccccccCCCHHHHHHhCC---CCCeEE
Confidence            357778888888777766666655444444455544           122222       37899998887   578888


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccC-----CCCCcEEEeccccc-CCccc
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWE-----EVRPDMVILGKALG-GGVIP  137 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~-----~~~~d~~s~sK~~~-~G~~~  137 (306)
                      +++.++|+||.. .+++.+++|.++|+++|+++|+||+|..+.+.+..+. ....     +....+.|+||.++ +|+ |
T Consensus       168 ~~~~P~NPTG~~-~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~Gl-R  245 (388)
T d1j32a_         168 VFNTPSNPTGMV-YTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGW-R  245 (388)
T ss_dssp             EEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTT-C
T ss_pred             EECCCCCCCCcc-cchhhhhhhhcccccCCeEEEchhhhhcccccCCCCCCHHHhCcccccceeEecCChhhhhcchh-H
Confidence            888889999954 6899999999999999999999999987655543221 1111     11223559999998 899 9


Q ss_pred             ceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893          138 VSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG  215 (306)
Q Consensus       138 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g  215 (306)
                      +||+++++++++.+...........+..++.++...++...+  ++..+.++++.+.+.+.|++.    ++.....+..|
T Consensus       246 vG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~g~~~~~p~gg  321 (388)
T d1j32a_         246 VGFLAGPVPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAM----PGLECPKPDGA  321 (388)
T ss_dssp             CEEEECCHHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTC----TTCBCCCCCBT
T ss_pred             eEEEEECHHHHHHHHHhhhhccccccHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHhC----CCCEecCCCce
Confidence            999999999988776544444455667777766655543211  223444445555555555433    23344556678


Q ss_pred             eEEEEEEecCCChhhHHHHHHHHH-HCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          216 LFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       216 ~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .++|+.++..  ..+..++++.|+ ++||.+.|+    .++++|++  +..+++++++++++|+++++ .+
T Consensus       322 ~~l~~~l~~~--~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~Rls--~~~~~e~l~~al~rl~~~l~-~l  387 (388)
T d1j32a_         322 FYMFPSIAKT--GRSSLDFCSELLDQHQVATVPGAAFGADDCIRLS--YATDLDTIKRGMERLEKFLH-GI  387 (388)
T ss_dssp             TEECCBCGGG--TCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEE--CCSCHHHHHHHHHHHHHHHH-HH
T ss_pred             EEEEEECCCC--CCCHHHHHHHHHHhCCEEEEeccccCCCCeEEEE--EeCCHHHHHHHHHHHHHHHH-Hh
Confidence            8888887752  245678888876 459999985    57899999  45789999999999999998 54

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=1.1e-23  Score=188.73  Aligned_cols=227  Identities=22%  Similarity=0.285  Sum_probs=173.2

Q ss_pred             cccccCCCHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc--cccccccc
Q 021893           39 HLKVDFGDITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG--LARSGRML  113 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~---~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g--~~~~g~~~  113 (306)
                      +..++|+|++++|++++.   +++++++|++++++++.|.+.+    |++++++|++||++||+||+|+.  ++..|.+.
T Consensus       153 ~~~~~~~d~~~le~~~~~~~~~~~~~~liv~egv~s~~G~~~~----L~~l~~L~~~~~a~LivDeah~~g~~g~~G~G~  228 (401)
T d1fc4a_         153 RYRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIAN----LKGVCDLADKYDALVMVDDSHAVGFVGENGRGS  228 (401)
T ss_dssp             EEEECTTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECC----HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCH
T ss_pred             EEEEcCCChHHHHHHHHHhhhcccCceEEEEcCCCCCCCchhh----hhHHHHHHhhcCcEEEehhhhccccccCCCCcc
Confidence            467889999999888775   3466789999999999999998    99999999999999999999984  44445543


Q ss_pred             ccccCCC--CCcE--EEecccccCCcccceeeEeCHHHHhhcCCCCc--cCCCCCCHHHHHHHHHHHHHHhh-ccHHHHH
Q 021893          114 ASDWEEV--RPDM--VILGKALGGGVIPVSAVLADKEVMLCIQPGEH--GSTFGGNPLASAVAIASLDVIRD-EKLAERS  186 (306)
Q Consensus       114 ~~~~~~~--~~d~--~s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~  186 (306)
                       .++++.  .+|+  .|+||+++ |. ..|++.+++++++.++....  ..+...++....++..+++.+.. ++.++++
T Consensus       229 -~~~~~~~~~~dii~~tl~Ka~g-g~-~Gg~v~g~~~~~~~l~~~~~~~~~s~~l~p~~~~aa~~~l~~~~~~~~~~~~l  305 (401)
T d1fc4a_         229 -HEYCDVMGRVDIITGTLGKALG-GA-SGGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRL  305 (401)
T ss_dssp             -HHHTTCTTCCSEEEEESSSTTC-SS-SCEEEEECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred             -chhccCCCCCeEEEeecccccc-cC-CcccccCCHHHHHHHHcCChhhhhcCCCCHHHHHHHHhhhcccccCHHHHHHH
Confidence             344443  3454  48999995 44 56779999999987764322  22334567777788888887765 5578899


Q ss_pred             HHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc-------CCCCEEEEeCCC
Q 021893          187 AHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP-------THDTIVRLTPPL  259 (306)
Q Consensus       187 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~-------~~~~~lRi~~~~  259 (306)
                      +++.+++++.+......      .....+.++++.+.+   ......+++.|+++||++.+       .+...||++++.
T Consensus       306 ~~~~~~~~~~l~~~g~~------~~~~~~pIv~v~~~~---~~~a~~~~~~L~~~Gi~v~~i~~PtVp~g~~~lRi~~~a  376 (401)
T d1fc4a_         306 WANARQFREQMSAAGFT------LAGADHAIIPVMLGD---AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSA  376 (401)
T ss_dssp             HHHHHHHHHHHHHTTCC------BCCSSSSEEEEEEEC---HHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCT
T ss_pred             HHHHHHHHhhhcccCCc------cCCCCCCEEEEEECC---HHHHHHHHHHHHHCCceEEeECCCCCCCCCceEEEEECC
Confidence            99999999988887432      122234556666664   45677899999999999874       245679999999


Q ss_pred             CCCHHHHHHHHHHHHHHHhhhcC
Q 021893          260 SISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       260 ~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      .+|++||+++++.|+++.+ ++.
T Consensus       377 ~hT~edId~~v~al~ev~~-~lg  398 (401)
T d1fc4a_         377 AHTPEQITRAVEAFTRIGK-QLG  398 (401)
T ss_dssp             TCCHHHHHHHHHHHHHHHH-HTT
T ss_pred             CCCHHHHHHHHHHHHHHHH-HhC
Confidence            9999999999999999998 754

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=1.4e-23  Score=186.86  Aligned_cols=257  Identities=17%  Similarity=0.203  Sum_probs=185.2

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccc-----------cCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccC
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIR-----------GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQG   71 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~   71 (306)
                      ...++|+.+|++......++..+....-           ........+..++|+|+++||+.+.+++++.++|+++.+++
T Consensus        99 e~al~~~SG~~an~~~i~al~~~~d~v~~d~~~h~si~~g~~~~~~~~~~~~hnd~~~le~~l~~~~~~~~~vv~e~v~s  178 (383)
T d1bs0a_          99 SRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFS  178 (383)
T ss_dssp             SEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECTTCHHHHHHHHHSCCSSCEEEEEESBCT
T ss_pred             CceEEecccchhhHHHHHhhcCCCceEEeeccccHHHhhccccCCCcceEecchHHHHHHHHhcccCCCceEEEecCCCC
Confidence            3567778888777666666655432210           00011122578999999999999998878889999999999


Q ss_pred             CCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc--ccccccccccccCCCCCcEE--EecccccCCcccceeeEeCHHH
Q 021893           72 EAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG--LARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEV  147 (306)
Q Consensus        72 ~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g--~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~g~~~~~~~~  147 (306)
                      ++|.+.|    +++|.++|++||++|++||+|+.  +|..|.+. .++++..+++.  ++||+++  . ..|++.++.++
T Consensus       179 ~~G~i~p----l~~l~~l~~~~~~~livDeah~~gv~G~~g~G~-~~~~~~~~~~~~~t~~ka~g--~-~Gg~v~~~~~~  250 (383)
T d1bs0a_         179 MDGDSAP----LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGS-CWLQKVKPELLVVTFGKGFG--V-SGAAVLCSSTV  250 (383)
T ss_dssp             TTCCBCC----HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCH-HHHTTCCCSEEEEESSSTTS--S-CCEEEEECHHH
T ss_pred             CCCcccc----hhHHHHHHHhcCcEEEeecceeeeecCCcccch-HHHcCCcccccccccccccc--c-cccccccchhH
Confidence            9999999    99999999999999999999983  45566654 56667766655  6778877  2 34558889888


Q ss_pred             HhhcCCCC--ccCCCCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEE
Q 021893          148 MLCIQPGE--HGSTFGGNPLASAVAIASLDVIRDE---KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEF  222 (306)
Q Consensus       148 ~~~~~~~~--~~~~~~~~~~~~~aa~~al~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~  222 (306)
                      ++.++...  ...+...++..++++.++++.+.+.   ....++.++..++++.|.++.     . ......+.++++.+
T Consensus       251 ~~~l~~~~~~~~~s~~~~p~~~aa~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g-----~-~~~~~~s~Ii~v~~  324 (383)
T d1bs0a_         251 ADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLP-----F-TLADSCSAIQPLIV  324 (383)
T ss_dssp             HHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSS-----C-EECSCCSSBCCEEE
T ss_pred             HHHHHhhchhhhhcccccchHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcC-----C-ccCCCCCCEEEEEE
Confidence            88776432  2233345667777788888887653   345566677777777776543     1 12233445556656


Q ss_pred             ecCCChhhHHHHHHHHHHCCceecc-------CCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          223 DKTALPVSAYDICLKMKERGILAKP-------THDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       223 ~~~~~~~~~~~~~~~l~~~Gi~~~~-------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      .+   .....++.+.|+++||++.+       .+...+|++++..+|++||+.+++.|..+
T Consensus       325 g~---~~~a~~~~~~L~~~Gi~v~~~~~PtVp~g~~~lRi~~~a~ht~edid~l~~~L~~~  382 (383)
T d1bs0a_         325 GD---NSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  382 (383)
T ss_dssp             ES---HHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             CC---HHHHHHHHHHHHHCCceEEEEcCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHhc
Confidence            54   45677899999999999874       23567999999999999999999998753

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=99.90  E-value=4.7e-23  Score=185.88  Aligned_cols=264  Identities=13%  Similarity=0.181  Sum_probs=185.9

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC---------------CCHHHHHHHHHh
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF---------------GDITALEKIFKE   56 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~---------------~d~~~le~~i~~   56 (306)
                      ..|++..|+.++-.....++..+....-...|.|+.           .+.++.               .+++.+++... 
T Consensus        91 ~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  169 (418)
T d2r5ea1          91 TEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFN-  169 (418)
T ss_dssp             TSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEESCCSSCEEGGGEECCHHHHHHHCC-
T ss_pred             ceEEEcCCCchhhhhhhhhccccccceeccccccchhhHHHHHcCCeEEEEEecccccccchhhhhhhhhHHHHhhhhh-
Confidence            468899999988888887787765554444456555           122221               24666665554 


Q ss_pred             cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-ccCCC---CCcEEEecccc
Q 021893           57 SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWEEV---RPDMVILGKAL  131 (306)
Q Consensus        57 ~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~~~~---~~d~~s~sK~~  131 (306)
                        .+++++++++++|++|.+ .+++.+++|.++|++||+++|.||+|..+...+... +. ...+.   ...+.|+||.+
T Consensus       170 --~~~~~~~i~~p~NPtG~~-~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~  246 (418)
T d2r5ea1         170 --EKTKMIIINTPHNPLGKV-MDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTF  246 (418)
T ss_dssp             --TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHT
T ss_pred             --ccccceecCCcCcccccc-ccHHHHHHHhhhhhcCCeeeecccchhhhccCCCccccccccccccceeeeeecCCccc
Confidence              679999999999999965 589999999999999999999999998765444321 11 12222   22344899999


Q ss_pred             c-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-----cc----HHHHHHHHHHHHHHHHHHHH
Q 021893          132 G-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-----EK----LAERSAHLGEELRQHLFKIQ  201 (306)
Q Consensus       132 ~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-----~~----~~~~~~~~~~~l~~~L~~~~  201 (306)
                      + +|+ |+||+++++++++.+........+..+.+.+.++...+.....     ++    ..++++.+++.+.+.|++. 
T Consensus       247 ~~pGl-RiG~~~~~~~~i~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-  324 (418)
T d2r5ea1         247 SLTGW-KIGWAYGPEALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV-  324 (418)
T ss_dssp             TCGGG-CCEEEESCHHHHHHHHHHHTTTTCSCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             cCCCc-ccccccccchhhhhhhhcccccccccccchhhhccccccccccccccchhhHHHHHHHHHHhhhhHHhhHhhc-
Confidence            8 999 9999999999988876544455566667766666555543221     22    3344455555555555554 


Q ss_pred             hhCCCceeeEEEeeeEEEEEEecCC---------ChhhHHHHHHHHHHC-CceeccC-----------CCCEEEEeCCCC
Q 021893          202 QQFPNYVKEVRGRGLFNAVEFDKTA---------LPVSAYDICLKMKER-GILAKPT-----------HDTIVRLTPPLS  260 (306)
Q Consensus       202 ~~~~~~~~~~~~~g~~~~i~~~~~~---------~~~~~~~~~~~l~~~-Gi~~~~~-----------~~~~lRi~~~~~  260 (306)
                          ++....+..|.++|++++...         ...+..+|++.|+++ ||.+.|+           +.+++|++  +.
T Consensus       325 ----g~~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~g~~~iRis--~~  398 (418)
T d2r5ea1         325 ----GMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYC--FF  398 (418)
T ss_dssp             ----TCEEEECSBSSEEEEECGGGSTTCCGGGCCCSSHHHHHHHHHHHHHSEECBCGGGGSCGGGHHHHTTEEEEE--CC
T ss_pred             ----CCcccCCCceeEEEEEcccccccccchhcccccCHHHHHHHHHHHCCEEEeCchhhCCCCCccCCCCEEEEE--ec
Confidence                355566788899999876421         134577899988765 9999885           24799999  46


Q ss_pred             CCHHHHHHHHHHHHHHHh
Q 021893          261 ISSNELQEGSKALHDVLE  278 (306)
Q Consensus       261 ~t~~~i~~~~~~l~~~l~  278 (306)
                      .+++++++++++|++++.
T Consensus       399 ~~~e~l~~a~~rl~~~lg  416 (418)
T d2r5ea1         399 KKDENLQKAAEILRKWKG  416 (418)
T ss_dssp             SCHHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHHHHc
Confidence            689999999999999886

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=99.90  E-value=1.1e-23  Score=188.58  Aligned_cols=268  Identities=13%  Similarity=0.136  Sum_probs=177.2

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC--------CCHHHHHHHHHhcCCcEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF--------GDITALEKIFKESGDQIAG   63 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~--------~d~~~le~~i~~~~~~~~~   63 (306)
                      ..|++..|+.++-..+..+...+....-...|.++.           .+.++.        .|.+.++.++..  +++++
T Consensus        90 ~~I~vt~G~~~al~~~~~~~~~pgd~vi~~~p~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~  167 (394)
T d1c7na_          90 DWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKD--KNNKA  167 (394)
T ss_dssp             GGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTC--TTEEE
T ss_pred             cceEeeccchhhhhhhhccccccccccccccCcccchhhHHhhhhhcccccccccccccccchhhhhhhhhcc--ccceE
Confidence            468899999999888888877765444333344433           122221        267777777753  57899


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccccc------CCCCCcEEEeccccc-CCcc
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW------EEVRPDMVILGKALG-GGVI  136 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~------~~~~~d~~s~sK~~~-~G~~  136 (306)
                      +++++++|+||.+ .+++.+++|.++|++|+++||+||+|.++.+.+.......      ......+.|+||.++ +|+ 
T Consensus       168 i~l~~P~NPTG~v-~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~-  245 (394)
T d1c7na_         168 LLFCSPHNPVGRV-WKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGM-  245 (394)
T ss_dssp             EEEESSBTTTTBC-CCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGG-
T ss_pred             EEeccccccccee-ccHHHhhhhhccccccceeEeccccccccccCCccccchhhhhcccccceeeccccccccccccc-
Confidence            9999999999964 6899999999999999999999999998755443221111      112223448899999 899 


Q ss_pred             cceeeEeC-HHHHhhcCCCCccCCCC-CCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE
Q 021893          137 PVSAVLAD-KEVMLCIQPGEHGSTFG-GNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR  212 (306)
Q Consensus       137 ~~g~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~  212 (306)
                      |+||++++ +.+.+.+.......... .....++++....+....  ++..+.+++..+.+.+.++....   +.....+
T Consensus       246 R~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~p  322 (394)
T d1c7na_         246 GMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHP---EIKAPLI  322 (394)
T ss_dssp             CCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCT---TSBCCCC
T ss_pred             ccccccccChhhhhhhhhhhhhccccccccccchhhhhhhcchhhhhcccccccchhhhhhhhhhhcccc---ceeecCC
Confidence            99998876 45555554322222222 233333333333322211  22444555555555555554422   2333445


Q ss_pred             EeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          213 GRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       213 ~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      ..|.++|+.++..  ..++.++++.|+++ ||.+.|+      +++++||+  +..++++|++++++|+++++ +++
T Consensus       323 ~g~~~~~~~~~~~--~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~~~iRis--~~~~~e~i~eal~rl~~~l~-~Lk  394 (394)
T d1c7na_         323 EGTYLQWIDFRAL--KMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERIN--LAAPSSVIQESLERLNKALK-DLK  394 (394)
T ss_dssp             SBSSEEEEECGGG--CCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEE--CCSCHHHHHHHHHHHHHHHH-HHC
T ss_pred             CceeEEEEECCCC--CCCHHHHHHHHHHhCCEEEEcchhhCCCCCCEEEEE--EeCCHHHHHHHHHHHHHHHH-hcC
Confidence            5677888888752  24678899999877 9998874      46899999  55788999999999999998 763

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=99.90  E-value=5e-24  Score=192.48  Aligned_cols=276  Identities=17%  Similarity=0.175  Sum_probs=189.1

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC----CCHHHHHHHHHhc------CCcE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF----GDITALEKIFKES------GDQI   61 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~----~d~~~le~~i~~~------~~~~   61 (306)
                      ..|++..|+..+-..++....++....-...|.++.           +..+|.    .|++.++..+.+.      ...+
T Consensus       105 ~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  184 (420)
T d1vp4a_         105 DNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVK  184 (420)
T ss_dssp             GGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHTTCGGGEE
T ss_pred             HHeEeccchhhhHHHHHHhhhccccccccccccccchhHHHHHHhhhcccccccccccccchhhhhhhhhHHHhhccccc
Confidence            357888888877777777666654433333344432           122322    2577776665431      1345


Q ss_pred             EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc----cccCCCCCcEEEecccccCCccc
Q 021893           62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA----SDWEEVRPDMVILGKALGGGVIP  137 (306)
Q Consensus        62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~----~~~~~~~~d~~s~sK~~~~G~~~  137 (306)
                      +++++++++|++|.. .+.+.+++|.++|++|++++|+||+|.++.+.+....    ....+....+.++||.+++|+ |
T Consensus       185 ~~~~~~~p~NPtG~~-~s~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~s~sk~~~~G~-R  262 (420)
T d1vp4a_         185 FIYVVSNFHNPAGVT-TSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPGL-R  262 (420)
T ss_dssp             EEEEECSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGGG-C
T ss_pred             eeeEecCCCCccchh-hhhhhhhhhhhhhhcccccccccchhhhccccCcccccccccccccceeEEecccccccccc-c
Confidence            666677788899855 6899999999999999999999999998755554221    112222333447778888999 9


Q ss_pred             ceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE
Q 021893          138 VSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD----EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG  213 (306)
Q Consensus       138 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~  213 (306)
                      +||+++++++++.+.........+.+.+.+.++...++....    .+..+.+++..+.+.+.|++.....++.....+.
T Consensus       263 iG~~~~~~~~i~~l~~~~~~~~~~~~~~~q~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~g~~~~~p~  342 (420)
T d1vp4a_         263 IGMVAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSE  342 (420)
T ss_dssp             EEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCS
T ss_pred             cccccccchhhhhhhhhhhhccccCchhhhhhhhhhcccccccccchhHHHHhhhhcccchhhhhhhhccCCCcEEecCC
Confidence            999999999998876544444455566666666555543211    2345666777777777777765554434444566


Q ss_pred             eeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC--------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCCCC
Q 021893          214 RGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT--------HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKMR  285 (306)
Q Consensus       214 ~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~~~  285 (306)
                      .|.++|+.+++   ..++.++++.|.++||.+.|+        ..+++|++.. ..+++++++++++|+++++ ++.+.+
T Consensus       343 gg~f~~~~~~~---~~d~~~~~~~l~~~gV~v~PG~~F~~~~~~~~~iRls~~-~~~~e~l~~a~~rL~~~l~-~~~~~~  417 (420)
T d1vp4a_         343 GGLFIWLTLPE---GFDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFC-LPPDEKIVEGIKRLREVVL-EYGKEK  417 (420)
T ss_dssp             BSSEEEEECCT---TCCTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECS-SSCHHHHHHHHHHHHHHHH-HHHHHT
T ss_pred             ceEEEEEECCC---CCCHHHHHHHHHHCCeEEEechhhCCCCCCCCEEEEEeC-cCCHHHHHHHHHHHHHHHH-HhhHhh
Confidence            78899998875   445667889999999999875        2579999953 3578999999999999999 876544

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=1.3e-22  Score=179.36  Aligned_cols=266  Identities=12%  Similarity=0.074  Sum_probs=166.7

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC--------CCHHHHHHHHHhcCCcEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF--------GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~--------~d~~~le~~i~~~~~~~~~v   64 (306)
                      .|++..|+.+|-.....++..+....-...|.++.           .+.++.        .|++.+++.+.+  ++++++
T Consensus        60 ~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~~~~~~~~--~~~~~i  137 (361)
T d1d2fa_          60 TVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK--PECKIM  137 (361)
T ss_dssp             GEEEESCHHHHHHHHHHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTS--TTEEEE
T ss_pred             eEEEeCCHHHHHHHHhhhccccccccccccccccchhHHHHhhcceEEeecccccccccccccccchhhccc--CCceeE
Confidence            46667777766655555555443322222233322           111111        378999998875  578899


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-cccCC--CCCcEEEeccccc-CCccccee
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-SDWEE--VRPDMVILGKALG-GGVIPVSA  140 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~~~~~--~~~d~~s~sK~~~-~G~~~~g~  140 (306)
                      ++++++|++|. +.+.+.+++|.++|+++|+++|+||+|.++.+.+.... .....  ....+.++||.++ +|+ |+||
T Consensus       138 ~l~~p~NPTG~-~~s~~~~~~i~~~~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~v~~~s~SK~~~~~g~-R~g~  215 (361)
T d1d2fa_         138 LLCSPQNPTGK-VWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPAL-TGAY  215 (361)
T ss_dssp             EEESSCTTTCC-CCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECSHHHHTCGGG-CCEE
T ss_pred             Eeccccccccc-ccchhhhhhhhhhhhhhheeeeecccccccccccccccccccccccccccccccccccccccc-ccee
Confidence            98889999995 46899999999999999999999999998754443221 11111  1223447899998 899 9999


Q ss_pred             eEeC-HHHHhhcC-CC-CccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893          141 VLAD-KEVMLCIQ-PG-EHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG  215 (306)
Q Consensus       141 ~~~~-~~~~~~~~-~~-~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g  215 (306)
                      +... +...+... .. ......+.+..++.++..+++....  +.....++++.+.+.+.+.+...   +.....+..|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~---~~~~~~p~gg  292 (361)
T d1d2fa_         216 GIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFP---ELNWQIPQST  292 (361)
T ss_dssp             EEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCS---SCCCCCCSBC
T ss_pred             eecchhHHHHHHhhhcccccccccchhhhHHHHHHHhhccchhhhcccccchhhHHHHHHHhhhhcc---cccccccCce
Confidence            8765 33222221 11 1112223344555555544443221  22334444444444444444322   2223445567


Q ss_pred             eEEEEEEecCCChhhHHHHHHHHHHC-CceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          216 LFNAVEFDKTALPVSAYDICLKMKER-GILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       216 ~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      .++|+.+...  ..+..+|++.|+++ ||.+.|+      +.+++|++  +..+++++++++++|+++++ ++
T Consensus       293 ~~~~~~l~~~--~~~~~~~~~~Ll~~~gv~v~pG~~F~~~~~~~vRis--~~~~~e~l~~al~rl~~~l~-~l  360 (361)
T d1d2fa_         293 YLAWLDLRPL--NIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLN--AGCPRSKLEKGVAGLINAIR-AV  360 (361)
T ss_dssp             SEEEEECGGG--CCCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEE--CCSCHHHHHHHHHHHHHHHH-HH
T ss_pred             eEEEEEccCC--CCCHHHHHHHHHHhCCEEEEeccccCCCCCCEEEEE--EcCCHHHHHHHHHHHHHHHH-hc
Confidence            8888887642  35688999998776 9999764      46799999  45788999999999999998 65

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.89  E-value=1.4e-22  Score=179.92  Aligned_cols=219  Identities=19%  Similarity=0.283  Sum_probs=166.3

Q ss_pred             cccccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-c-cccccccccc
Q 021893           39 HLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-G-LARSGRMLAS  115 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g-~~~~g~~~~~  115 (306)
                      +..++|||++.++++++.+. .+.++|+++.++++.|.+.|    |++|.++|++||++|++||+|+ | +|..|.+. .
T Consensus       155 ~~~f~Hnd~~~l~~l~~~~~~~~~~~iv~egvySmdGd~ap----l~~l~~L~~~y~~~L~vDeAHs~Gv~G~~G~G~-~  229 (396)
T d2bwna1         155 KRIFRHNDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGP----IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGV-A  229 (396)
T ss_dssp             EEEECTTCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCH-H
T ss_pred             ceEeecchHHHhhhHHhhhcccCceeEEEEeeccCcccccc----cHhHHHHhhhhcceeeeccceeeeeeccccccc-h
Confidence            57789999999999988643 45789999999999999999    9999999999999999999998 4 56677665 3


Q ss_pred             ccCCC--CCc--EEEeccccc--CCcccceeeEeCHHHHhhcCCCCccCCC--CCCHHHHHHHHHHHHHHhhc---cHHH
Q 021893          116 DWEEV--RPD--MVILGKALG--GGVIPVSAVLADKEVMLCIQPGEHGSTF--GGNPLASAVAIASLDVIRDE---KLAE  184 (306)
Q Consensus       116 ~~~~~--~~d--~~s~sK~~~--~G~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~aa~~al~~~~~~---~~~~  184 (306)
                      .+++.  ..|  +.||||++|  ||+     +++++++++.++.......|  ..++..++++.++++.+..+   +.+.
T Consensus       230 ~~~~~~~~~di~~gTlsKa~g~~Gg~-----v~~~~~~i~~l~~~~~~~ifStalpp~~~aa~~~al~i~~~~~~~~~r~  304 (396)
T d2bwna1         230 ERDGLMHRIDIFNGTLAKAYGVFGGY-----IAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRD  304 (396)
T ss_dssp             HHHTCGGGCSEEEEESSSTTCSCCEE-----EEECHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred             hhcCCceeeeeeeecccccccccccc-----cchhHHHHHHHHhhcchhhhcccCcHHHHHHHHHHHHHhhcchHHHHHH
Confidence            33332  224  459999998  455     89999998888754333334  34566777777888887653   2456


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceecc-------CCCCEEEEe
Q 021893          185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKP-------THDTIVRLT  256 (306)
Q Consensus       185 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~-------~~~~~lRi~  256 (306)
                      .++.+.+++++.+..++..      .....+.++++.+.+   +....++++.|+ ++||++.+       .+...+|++
T Consensus       305 ~l~~~~~~~~~~l~~~g~~------~~~~~spIvpv~ig~---~~~~~~~a~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~  375 (396)
T d2bwna1         305 AQQMHAKVLKMRLKALGMP------IIDHGSHIVPVVIGD---PVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFT  375 (396)
T ss_dssp             HHHHHHHHHHHHHHHHTCC------BCCCSSSCEEEECCC---HHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEEC
T ss_pred             HHHHHHHHHHHHHHhcCCC------cCCCCCCEEEEEeCC---HHHHHHHHHHHHHhCCEEEEEECCCcCCCCCeeEEEE
Confidence            7778888888888887532      112345566776654   456778888866 67998774       245689999


Q ss_pred             CCCCCCHHHHHHHHHHHHHH
Q 021893          257 PPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       257 ~~~~~t~~~i~~~~~~l~~~  276 (306)
                      ++..+|++||+.++++|+++
T Consensus       376 lsa~ht~edId~l~~~L~~i  395 (396)
T d2bwna1         376 PSPVHDLKQIDGLVHAMDLL  395 (396)
T ss_dssp             CCTTSCHHHHHHHHHHHHHH
T ss_pred             eCccCCHHHHHHHHHHHHHh
Confidence            99999999999999999875

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=99.89  E-value=3.8e-23  Score=185.55  Aligned_cols=268  Identities=16%  Similarity=0.177  Sum_probs=176.6

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCC----CHHHH----HHHHHhcCCcEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFG----DITAL----EKIFKESGDQIAG   63 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~----d~~~l----e~~i~~~~~~~~~   63 (306)
                      ..|++..|+.++-.....++..+....-...|.++.           ...++.+    +...+    ++......+.+.+
T Consensus        95 ~~I~it~G~~~al~~~~~~l~~~gd~v~~~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (403)
T d1wsta1          95 VEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAFKYYDPEFISIPLDDKGMRVDLLEEKLEELRKQGKRVKIV  174 (403)
T ss_dssp             CEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTEECHHHHHHHHHHHHHTTCCCCEE
T ss_pred             HHeeecccchHHHHHHHHHHhhcCCccccCCCcchhhhHHHhhccccceeEeecccCCccccccccchhhhhcccccccc
Confidence            467888888777776666665543333333344432           1222222    22222    2333333355677


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-c---ccCCCCCcEEEecccccCCcccce
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-S---DWEEVRPDMVILGKALGGGVIPVS  139 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-~---~~~~~~~d~~s~sK~~~~G~~~~g  139 (306)
                      +++.+++|++|.. .+.+.+++|.++|++||++||+||+|.++.+.+.... .   +..+....+.|+||.+++|+ |+|
T Consensus       175 ~~~~~p~NPtG~~-~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~-RiG  252 (403)
T d1wsta1         175 YTVSTFQNPAGVT-MSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSKILAPGF-RIG  252 (403)
T ss_dssp             EECCSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSCEEEEEESTTTTCGGG-CCE
T ss_pred             ccccccCCCCCcc-CCHHHHHHHHHHHHhcCceeccccchhheecCCCCCCcccccCCCCcEEEEccccceecCcc-ccc
Confidence            7788889999855 5899999999999999999999999998766654331 1   22233334569999999999 999


Q ss_pred             eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893          140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDE----KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG  215 (306)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~----~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g  215 (306)
                      |+++++++++.+...........+...+.+..+.+.....+    +..+.++.+.+.+.+.|.+....  ......+..|
T Consensus       253 ~~i~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~--~~~~~~p~gg  330 (403)
T d1wsta1         253 WVAAHPHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYMPE--GVEWTKPEGG  330 (403)
T ss_dssp             EEEECHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT--TCEECCCSBS
T ss_pred             ccccchHHHHHHHHHHhhhccccccchhhhHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhccC--CeEEeCCCce
Confidence            99999998887765433344445555555544444332222    23444444445555555544222  2334456678


Q ss_pred             eEEEEEEecCCChhhHHHHHHHHHHCCceeccC--------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          216 LFNAVEFDKTALPVSAYDICLKMKERGILAKPT--------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       216 ~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .++|+.+++   +.+...+++.|.++||.+.|+        .++++|+++. ..+++++++++++|+++++
T Consensus       331 ~~~~~~~~~---~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRi~~~-~~~~~~l~~al~rl~~~l~  397 (403)
T d1wsta1         331 MFVRVTLPE---GIDTKLMMERAVAKGVAYVPGEAFFVHRDKKNTMRLNFT-YVPEETIREGVRRLAETIK  397 (403)
T ss_dssp             SEEEEECCT---TCCTTTTHHHHHHTTEECEEGGGGSTTCCCCSEEEEECS-SSCHHHHHHHHHHHHHHHH
T ss_pred             eEEEEECCC---CCCHHHHHHHHHHCCEEEEechhhcCCCCCCCEEEEEec-CCCHHHHHHHHHHHHHHHH
Confidence            899998885   456678899999999999874        3579999953 3589999999999999998

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=99.88  E-value=9.9e-23  Score=181.11  Aligned_cols=258  Identities=16%  Similarity=0.195  Sum_probs=173.6

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCCc-----------cccc-------CCCHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH-----------LKVD-------FGDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~-------~~d~~~le~~i~~~~~~~~~v   64 (306)
                      ..|++..|+.+|-...+.++..+....-...|.++..           ..++       ..|.+.+++...   ++++++
T Consensus        89 ~~i~~t~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  165 (375)
T d1o4sa_          89 DQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLV---GKTKAV  165 (375)
T ss_dssp             GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCC---TTEEEE
T ss_pred             ccccccCcHHHHHHHHHHHHhCCCCEEEEccCccccchhhhhccccccccccccccccccchhHHHHHhhc---cCccEE
Confidence            4577788888777777767766544333334554441           1111       125666665444   578888


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc----cccCCCCCcEEEeccccc-CCcccce
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA----SDWEEVRPDMVILGKALG-GGVIPVS  139 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~----~~~~~~~~d~~s~sK~~~-~G~~~~g  139 (306)
                      +++.++|+||.. .+.+.+++|.++|++|+++||+||+|..+...+....    .+.++....+.|+||.++ +|+ |+|
T Consensus       166 ~l~nP~NPTG~~-~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G~-R~G  243 (375)
T d1o4sa_         166 LINSPNNPTGVV-YRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGW-RVG  243 (375)
T ss_dssp             EEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGG-CCE
T ss_pred             EEeCCCCCccCC-CCHHHHHHHHHhHHHcCCceehHhhhccccccccccccccccCCCCCEEEEeechhhccCCcc-ccc
Confidence            888889999965 5899999999999999999999999986544333221    122233344569999999 999 999


Q ss_pred             eeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893          140 AVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA  219 (306)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~  219 (306)
                      |+++++++++.+...............+..+...++.. .....+.++++.+.+.+.|++.+     +....+..|.++|
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~l~~~g-----~~~~~p~gg~f~~  317 (375)
T d1o4sa_         244 YLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVD-NSYMVQTFKERKNFVVERLKKMG-----VKFVEPEGAFYLF  317 (375)
T ss_dssp             EEECCHHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHHHHHHTT-----CCCCCCSBSSEEE
T ss_pred             cccccccchhhhhhhhccccccccccchhhhhhhcccc-hhhhHHHHHHHHHHHHHHHHhcC-----ceEecCCccEEEE
Confidence            99999998877654333333334444444333322211 12345666677777777776653     3334456788889


Q ss_pred             EEEecCCChhhHHHHHHHHH-HCCceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          220 VEFDKTALPVSAYDICLKMK-ERGILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       220 i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +.++.     +..+++..|+ ++||.+.|+    .++++|++  +..+++++++++++|+++++
T Consensus       318 ~~~~~-----~~~~~~~~ll~~~gV~v~pG~~F~~~g~iRis--~~~~~e~l~~al~rl~~~l~  374 (375)
T d1o4sa_         318 FKVRG-----DDVKFCERLLEEKKVALVPGSAFLKPGFVRLS--FATSIERLTEALDRIEDFLN  374 (375)
T ss_dssp             EECSS-----CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEE--CCSCHHHHHHHHHHHHHHHT
T ss_pred             EECCC-----CHHHHHHHHHHhCCEEEEEccccCCCCeEEEE--EcCCHHHHHHHHHHHHHHhc
Confidence            88864     3456666655 569999985    47899999  45789999999999999886

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=99.88  E-value=4.9e-22  Score=179.87  Aligned_cols=267  Identities=18%  Similarity=0.156  Sum_probs=164.7

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC----------c--ccccC-------CCHHHHHHHHHh---cCCcE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG----------H--LKVDF-------GDITALEKIFKE---SGDQI   61 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~----------~--~~~~~-------~d~~~le~~i~~---~~~~~   61 (306)
                      .|++..|+.++-...+.++..+.+..-...|.++.          +  +.++.       .|++.+++.+++   ...++
T Consensus       111 ~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~~~~~~~~~~g~~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  190 (431)
T d1m7ya_         111 HLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRV  190 (431)
T ss_dssp             GEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCE
T ss_pred             eEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHhcCceeccccccchhcccccHHHhhhhhhhhhhccCcc
Confidence            56666777666666665555543322222233322          1  11111       268888888764   33578


Q ss_pred             EEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-c---cC---------CCCCcEEEe
Q 021893           62 AGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-D---WE---------EVRPDMVIL  127 (306)
Q Consensus        62 ~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~---~~---------~~~~d~~s~  127 (306)
                      +++++++++|++|.. .+++.+++|.++|++||+++|+||+|.++.+.+..+ +. +   ..         +....+.|+
T Consensus       191 ~~i~~~nP~NPtG~~-~s~~~l~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~vi~~~s~  269 (431)
T d1m7ya_         191 KGVLVTNPSNPLGTT-MTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSL  269 (431)
T ss_dssp             EEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHTTTTTCSSSSSGGGGEEEEEES
T ss_pred             eEEEecCcccccccc-ccccccccccccccccCcceeecccccccccCCCCCCCHHHHhhhcccccccccCceEEEEecC
Confidence            899998899999955 689999999999999999999999999765544322 11 0   00         011124489


Q ss_pred             ccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-----ccHHHHHHHHHHHHHHHHHHHH
Q 021893          128 GKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-----EKLAERSAHLGEELRQHLFKIQ  201 (306)
Q Consensus       128 sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-----~~~~~~~~~~~~~l~~~L~~~~  201 (306)
                      ||.++ +|+ |+||++++++++........ .....+...+.++.+.+.....     .+...+++++.+.+.+.|++. 
T Consensus       270 SK~~~~~G~-RiG~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-  346 (431)
T d1m7ya_         270 SKDLGLPGF-RVGAIYSNDDMVVAAATKMS-SFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-  346 (431)
T ss_dssp             SSSSCCGGG-CEEEEEESCHHHHHHHHHHG-GGSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred             cccccCCCC-ccceeccchhhhHHHHHHHh-ccccccccccchhhhhhccchhhhhhhhhhhhhhhhhhhhhhhhhhcC-
Confidence            99999 899 99999998776543322111 1222333333333332221111     112333444444444444332 


Q ss_pred             hhCCCceeeEEEeeeEEEEEEecCC---ChhhHHHHHHHHHHC-CceeccC------CCCEEEEeCCCCCCHHHHHHHHH
Q 021893          202 QQFPNYVKEVRGRGLFNAVEFDKTA---LPVSAYDICLKMKER-GILAKPT------HDTIVRLTPPLSISSNELQEGSK  271 (306)
Q Consensus       202 ~~~~~~~~~~~~~g~~~~i~~~~~~---~~~~~~~~~~~l~~~-Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~  271 (306)
                          ++....+..|.++|++++..-   ...+..++++.|+++ ||.+.|+      .++++|++.. ..++++++++++
T Consensus       347 ----gi~~~~p~gg~f~w~~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~F~~~~~~~~Ri~~a-~~~e~~l~~al~  421 (431)
T d1m7ya_         347 ----GISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFA-NLPERTLDLAMQ  421 (431)
T ss_dssp             ----TCEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECS-SSCHHHHHHHHH
T ss_pred             ----CcEEecCCceeEEEEECccccccCcccCHHHHHHHHHHHCCEEEEeccccCCCCCCEEEEEeC-cCCHHHHHHHHH
Confidence                243444567888999887421   123456788888754 9999874      4689999942 346789999999


Q ss_pred             HHHHHHhhh
Q 021893          272 ALHDVLELD  280 (306)
Q Consensus       272 ~l~~~l~~~  280 (306)
                      ||+++++ +
T Consensus       422 rL~~~l~-~  429 (431)
T d1m7ya_         422 RLKAFVG-E  429 (431)
T ss_dssp             HHHHHHH-H
T ss_pred             HHHHHHH-H
Confidence            9999998 5

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.88  E-value=1.5e-22  Score=179.44  Aligned_cols=256  Identities=19%  Similarity=0.189  Sum_probs=176.9

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC--------CCHHHHHHHHHhcCCcEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF--------GDITALEKIFKESGDQIAG   63 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~--------~d~~~le~~i~~~~~~~~~   63 (306)
                      ..|++.+|+.+|....+..+..+........|.++.           +..++.        .|++.+++.++   +.+++
T Consensus        79 ~~Iiit~G~~~al~~~~~~l~~~~d~v~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~  155 (368)
T d1v2da_          79 ESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALT---PRTRA  155 (368)
T ss_dssp             GGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCC---TTEEE
T ss_pred             cceeeccchHHHHHHHhhccccccccccccCCcchhhhhHHHhcCCccceeccccccccccCCHHHHHHhhc---cCceE
Confidence            468888888888777777776654444333344443           112221        37899988887   46778


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc--ccCCCCCcEEEeccccc-CCccccee
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS--DWEEVRPDMVILGKALG-GGVIPVSA  140 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~--~~~~~~~d~~s~sK~~~-~G~~~~g~  140 (306)
                      ++++.++|++|.+ .+.+.+++|.++|++||+++|+||+|..+.........  ...+....+.++||.++ +|+ |+||
T Consensus       156 i~~~~p~NPtG~~-~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sk~~~~~G~-R~g~  233 (368)
T d1v2da_         156 LLLNTPMNPTGLV-FGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGY-RVGW  233 (368)
T ss_dssp             EEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGG-CCEE
T ss_pred             EEEcCCCCccccc-CCHHHHHHHHHHHHHcCCeeeechhhhhhcccccccccccccccccceeeccccccccccc-cccc
Confidence            8888889999965 58999999999999999999999999854333222111  11222234558888887 799 9999


Q ss_pred             eEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhcc----HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893          141 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK----LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL  216 (306)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~----~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~  216 (306)
                      ++.++++++.+.........+.+.+.+.++..+++.....+    ..+.++++.+.+.+.|++.+     .....+..|.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-----~~~~~p~g~~  308 (368)
T d1v2da_         234 IVGPKEFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAMG-----LRVYVPEGTY  308 (368)
T ss_dssp             EECCTTTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHTT-----CCEECCSBSS
T ss_pred             ccccccccchhhhhhhccccccccccccccccccccccchhhHHHHHHHHHHhhhhhhhhHHhcC-----cEEecCCcee
Confidence            99999988877665555566677777777777776554433    33445555556666665542     3334455678


Q ss_pred             EEEEEEecCCChhhHHHHHHHHHHCCceeccC--------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          217 FNAVEFDKTALPVSAYDICLKMKERGILAKPT--------HDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       217 ~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      ++|+.++.    .+..   +.|.++||.+.|+        +.+++|++  +..+++++++++++|++++
T Consensus       309 ~~~~~l~~----~~~~---~ll~~~gI~v~pg~~F~~~~~~~~~iRis--~~~~~e~i~~ai~rL~~~l  368 (368)
T d1v2da_         309 FLMAELPG----WDAF---RLVEEARVALIPASAFYLEDPPKDLFRFA--FCKTEEELHLALERLGRVV  368 (368)
T ss_dssp             EEEEECTT----CCHH---HHHHHTCEECEEGGGGCSSSCCTTEEEEE--CCSCHHHHHHHHHHHHHHC
T ss_pred             EEEEeCCc----cHHH---HHHHhCCEEEEechhhCCCCCCCCEEEEE--ecCCHHHHHHHHHHHHHhC
Confidence            88888763    3333   4467889999874        36899999  5578999999999999864

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=7.1e-22  Score=178.11  Aligned_cols=263  Identities=14%  Similarity=0.171  Sum_probs=175.7

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-----------------CCHHHHHHHHH
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-----------------GDITALEKIFK   55 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-----------------~d~~~le~~i~   55 (306)
                      .|++..|+.++-...+.++..+....-...|.++.           .+.++.                 .|.++++... 
T Consensus        90 ~I~it~G~~~al~~~~~~l~~~g~~vlv~~p~~~~y~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-  168 (418)
T d1w7la_          90 NVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKF-  168 (418)
T ss_dssp             HEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECC---CCSEEGGGEECCHHHHHHHC-
T ss_pred             ceeeccCcHHHHHHHHHhhccCCceeeccccccchhHHHHHHcCCEeeccccccccccccccccccCcccchhhhhccc-
Confidence            57888888887776666666644333222233332           111111                 1344444333 


Q ss_pred             hcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc-ccCCCC---CcEEEeccc
Q 021893           56 ESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS-DWEEVR---PDMVILGKA  130 (306)
Q Consensus        56 ~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~-~~~~~~---~d~~s~sK~  130 (306)
                        .+++++++++.++|++|.. .+++.+++|.++|++|++++|+||+|.++.+.+... +. ...+..   ..+.|+||.
T Consensus       169 --~~~~~~i~~~~p~NPtG~~-~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~  245 (418)
T d1w7la_         169 --TSRTKALVLNTPNNPLGKV-FSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKT  245 (418)
T ss_dssp             --CTTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHH
T ss_pred             --cccccceeccCcCCccccc-ccHHHHHHHHHHHHhcCCCchhhhhhHHhhcCCCCCCCHHHccccccccceecccCcc
Confidence              3678999999999999955 589999999999999999999999999876555422 11 222222   234489999


Q ss_pred             cc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-----ccH----HHHHHHHHHHHHHHHHHH
Q 021893          131 LG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-----EKL----AERSAHLGEELRQHLFKI  200 (306)
Q Consensus       131 ~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-----~~~----~~~~~~~~~~l~~~L~~~  200 (306)
                      ++ +|+ |+||+++++++++.+........++.+.+.+.++..++.....     .++    .+.++++++.+.+.|++.
T Consensus       246 ~~~pG~-RvG~~v~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~  324 (418)
T d1w7la_         246 FSATGW-KVGWVLGPDHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV  324 (418)
T ss_dssp             TTCGGG-CCEEEECCHHHHHHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCCC-cccccccchhhhhhhccccccccccccchhhHHHHHHhhhccccccccccccccchhhhhhhhhhhhhhhhhc
Confidence            98 899 9999999999888877655555666777877777766654321     222    334444444455555443


Q ss_pred             HhhCCCceeeEEEeeeEEEEEEecC----------CChhhHHHHHHHHHH-CCceeccC-----------CCCEEEEeCC
Q 021893          201 QQQFPNYVKEVRGRGLFNAVEFDKT----------ALPVSAYDICLKMKE-RGILAKPT-----------HDTIVRLTPP  258 (306)
Q Consensus       201 ~~~~~~~~~~~~~~g~~~~i~~~~~----------~~~~~~~~~~~~l~~-~Gi~~~~~-----------~~~~lRi~~~  258 (306)
                           ++....+..|.++|+.+++.          .......++++.|++ +||.+.|+           ..++||++  
T Consensus       325 -----g~~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~~~~~iRis--  397 (418)
T d1w7la_         325 -----GLKPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFC--  397 (418)
T ss_dssp             -----TCEEEECSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEE--
T ss_pred             -----CCcccCCCceeEEEEECcccccccchhccccccccHHHHHHHHHHHCCEEEEcchhhcCCCccCCCCCEEEEE--
Confidence                 24445667888899987631          012335678888765 59999764           35799999  


Q ss_pred             CCCCHHHHHHHHHHHHHHHh
Q 021893          259 LSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       259 ~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +..+++++++++++|+++..
T Consensus       398 ~~~~~~~l~~a~~rl~~~~~  417 (418)
T d1w7la_         398 FVKDEATLQAMDEKLRKWKV  417 (418)
T ss_dssp             CCCCHHHHHHHHHHHHHHHC
T ss_pred             EcCCHHHHHHHHHHHHHHhc
Confidence            56789999999999998764

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=99.88  E-value=5.3e-22  Score=179.47  Aligned_cols=223  Identities=14%  Similarity=0.160  Sum_probs=145.4

Q ss_pred             CHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc-cc----cc
Q 021893           46 DITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML-AS----DW  117 (306)
Q Consensus        46 d~~~le~~i~~---~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~-~~----~~  117 (306)
                      |++.++++++.   ..++++++++++++|++|. +.+.+.+++|.++|++||++||+||+|.++.+.+..+ ++    +.
T Consensus       171 d~~~~~~~~~~~~~~~~~~~~~~l~nP~NPtG~-~~s~~~~~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~  249 (428)
T d1iaya_         171 TSKAVKEAYENAQKSNIKVKGLILTNPSNPLGT-TLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDE  249 (428)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTS
T ss_pred             ccccccchhhhhhccCCCceEEEEccCCCcccc-cccccccchhheeeccCcEEEEecccccccccCcccccccccccch
Confidence            67777665542   3467888888888999985 4689999999999999999999999999765554322 11    00


Q ss_pred             -------CCCCCcEEEeccccc-CCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHH---HHhh--ccHH
Q 021893          118 -------EEVRPDMVILGKALG-GGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLD---VIRD--EKLA  183 (306)
Q Consensus       118 -------~~~~~d~~s~sK~~~-~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~---~~~~--~~~~  183 (306)
                             ......+.|+||.++ +|+ |+||+++ ++.+.+.+.......  ..+...+.++.+.+.   .+..  ++..
T Consensus       250 ~~~~~~~~~~vi~~~s~SK~~~~~Gl-RiG~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~a~l~~~~~~~~~~~~~~  326 (428)
T d1iaya_         250 QEMTYCNKDLVHIVYSLSKDMGLPGF-RVGIIYSFNDDVVNCARKMSSFG--LVSTQTQYFLAAMLSDEKFVDNFLRESA  326 (428)
T ss_dssp             GGGTTSCTTSEEEEEESTTTSSCGGG-CEEEEEESCHHHHHHHHHHHTTS--CCCHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             hhccccccceEEEEecCCCcccCCCc-ccccccccccchhhhhhhhhccc--ccccccccchhhhhhhhccccccccccc
Confidence                   011122449999998 899 9999988 455665554321111  223333333222221   1111  2234


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC---ChhhHHHHHHHHHHC-CceeccC------CCCEE
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA---LPVSAYDICLKMKER-GILAKPT------HDTIV  253 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~---~~~~~~~~~~~l~~~-Gi~~~~~------~~~~l  253 (306)
                      ++++++.+.+.+.|+..     ++....+..|.++|+.++...   ......++++.|+++ ||.+.|+      +++++
T Consensus       327 ~~l~~r~~~~~~~L~~~-----gi~~~~p~gg~f~w~~l~~~~~~~~~~~~~~l~~~Ll~~~gV~v~PG~~F~~~~~g~~  401 (428)
T d1iaya_         327 MRLGKRHKHFTNGLEVV-----GIKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWF  401 (428)
T ss_dssp             HHHHHHHHHHHHHHHHT-----TCCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEE
T ss_pred             cccchhHHHHHHHHHhC-----CCEEecCCcceEEEEECccccccCCCCCHHHHHHHHHHhCCEEEEcchhcCCCCCCEE
Confidence            45555566666666543     233344667889999987421   122455788888765 9999874      47899


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          254 RLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       254 Ri~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      |++.. ..++++++++++||++++.
T Consensus       402 Ris~a-~~~~~~l~~al~Rl~~~l~  425 (428)
T d1iaya_         402 RVCFA-NMDDGTVDIALARIRRFVG  425 (428)
T ss_dssp             EEECS-SSCHHHHHHHHHHHHHHHH
T ss_pred             EEEeC-CCCHHHHHHHHHHHHHHHh
Confidence            99942 3567789999999999987

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=99.88  E-value=8.6e-23  Score=182.83  Aligned_cols=221  Identities=14%  Similarity=0.123  Sum_probs=149.1

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc---ccCCCCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS---DWEEVRP  122 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~---~~~~~~~  122 (306)
                      |++.+++.+.   +++++++++.++|+||.+ .+.+.+++|.++|++|++++|.||+|.++.+.+...+.   .......
T Consensus       155 d~~~~~~~~~---~~~~~v~l~~P~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~vi  230 (395)
T d1xi9a_         155 DIDDIRKKIT---DRTKAIAVINPNNPTGAL-YDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVI  230 (395)
T ss_dssp             CHHHHHHHCC---TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEE
T ss_pred             hHHHHHHhhc---ccccEEEecCCCCCccch-hhHHHHHHHHhhhhhcCeeEEeccccccccccccccchhhcCCCCCEE
Confidence            7888888776   578888888889999964 68999999999999999999999999976444432221   1122223


Q ss_pred             cEEEeccccc-CCcccceeeEeC--HHHHhhcCC---CCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 021893          123 DMVILGKALG-GGVIPVSAVLAD--KEVMLCIQP---GEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELR  194 (306)
Q Consensus       123 d~~s~sK~~~-~G~~~~g~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~  194 (306)
                      .+.|+||.++ +|+ |+||+++.  +..+..+..   .......+.+.+++.++..+++...+  ++..+.++++++.+.
T Consensus       231 ~~~S~SK~~~~~Gl-RvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~  309 (395)
T d1xi9a_         231 VMNGLSKVYFATGW-RLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIY  309 (395)
T ss_dssp             EEEESTTTTCCGGG-CCEEEEEECTTCTTHHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCcchhcccchh-hcEeeEecCHHHHHHHHHHHHHHhhcCCCCcCHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence            3449999999 899 99997653  222222211   11123344566777776666642211  223445555556666


Q ss_pred             HHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccC------CCCEEEEeCCCCCCHHHHH
Q 021893          195 QHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPT------HDTIVRLTPPLSISSNELQ  267 (306)
Q Consensus       195 ~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~  267 (306)
                      +.|++.    +......+..|+++|+.++... ..+..+++..|+ ++||.+.|+      +++++||+  +..+.++++
T Consensus       310 ~~L~~~----~~~~~~~p~gg~~~~~~l~~~~-~~~~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~Ris--~~~~~e~l~  382 (395)
T d1xi9a_         310 KRLNEI----PGISTTKPQGAFYIFPKIEVGP-WKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAV--FLPPIEILE  382 (395)
T ss_dssp             HHHHTS----TTEECCCCCBSSEECCEECSCS-CSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEE--CCSCHHHHH
T ss_pred             HHHHhC----CCceecCCCeeEEEeEECCCCC-CCCHHHHHHHHHHhCCEEEEcChhhCCCCCCEEEEE--ecCCHHHHH
Confidence            655543    2233444566888898887422 234667777766 559999875      37899999  567899999


Q ss_pred             HHHHHHHHHHh
Q 021893          268 EGSKALHDVLE  278 (306)
Q Consensus       268 ~~~~~l~~~l~  278 (306)
                      +++++|+++++
T Consensus       383 eal~rl~~~l~  393 (395)
T d1xi9a_         383 EAMDRFEKFMK  393 (395)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999999987

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=99.87  E-value=9.2e-23  Score=182.19  Aligned_cols=262  Identities=12%  Similarity=0.115  Sum_probs=173.0

Q ss_pred             ceEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccCC------CHHHHHHHHHhcCCcEEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDFG------DITALEKIFKESGDQIAGFL   65 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~------d~~~le~~i~~~~~~~~~v~   65 (306)
                      ..|++..|+.++-......+..+........|.++.           ...++.+      +.+.+++   ...+++++++
T Consensus        88 ~~I~it~G~~~~l~~~~~~l~~~gd~V~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  164 (389)
T d2gb3a1          88 ENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAIPQNLES---FINERTKGIV  164 (389)
T ss_dssp             GGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCCCTTGGG---GCCTTEEEEE
T ss_pred             ceEEecccccccccccccccccCCCeEEEeCCCCccccccccccCccccccccccccccchhhhhhh---hcccCccEEE
Confidence            468888888888777776776655444444555544           1111111      1222222   2236788999


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC--CCCcEEEeccccc-CCcccceeeE
Q 021893           66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE--VRPDMVILGKALG-GGVIPVSAVL  142 (306)
Q Consensus        66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~--~~~d~~s~sK~~~-~G~~~~g~~~  142 (306)
                      ++.++|++|.. .+.+.+++|.++|++|++++|.||+|.++...+...+.....  ...-+.++||.++ +|+ |+||++
T Consensus       165 l~nP~NPtG~~-~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~v~~s~sK~~~~~Gl-RiG~~~  242 (389)
T d2gb3a1         165 LSNPCNPTGVV-YGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGA-RVGCLI  242 (389)
T ss_dssp             EESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGG-CCEEEE
T ss_pred             eCCCCcccccc-chHHHHHHHHhhcccCCEEEEEeccccccccccccccccccccccccccccccccccCccc-ceeeee
Confidence            88899999965 589999999999999999999999999876665533222211  1122348889988 899 999999


Q ss_pred             eCHH-HHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEE
Q 021893          143 ADKE-VMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNA  219 (306)
Q Consensus       143 ~~~~-~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~  219 (306)
                      ++.+ +.+.... .....++.+.+.+.++...+.....  +...++++++++.+.+.|++.+    ......+..|.++|
T Consensus       243 ~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~----~~~~~~p~~g~~~~  317 (389)
T d2gb3a1         243 TRNEELISHAMK-LAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHG----LKRFTKPSGAFYIT  317 (389)
T ss_dssp             CSCHHHHHHHHH-HHHHSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTT----CCCBCCCSBSSEEE
T ss_pred             ccchhHHHHHhh-hhhccccccccccccccccccccchhcccccccccccchhhhhhhhhhc----cccccCCCceEEEE
Confidence            8655 4333322 2233444556666665554432111  2345566666666666666653    12234567788899


Q ss_pred             EEEecCCChhhHHHHHHHHHHC------CceeccC---------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          220 VEFDKTALPVSAYDICLKMKER------GILAKPT---------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       220 i~~~~~~~~~~~~~~~~~l~~~------Gi~~~~~---------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +.++.    .++.++++.|+++      ||.+.|+         +.+++|++  +..+++++++++++|+++++ ++
T Consensus       318 ~~lp~----~~~~~~~~~ll~e~~l~~~~v~v~pg~~f~~~~~~~~~~iRis--~~~~~~~l~~a~~~L~~~lk-~f  387 (389)
T d2gb3a1         318 AELPV----EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIA--CVLEKDLLSRAIDVLMEGLK-MF  387 (389)
T ss_dssp             EECSS----SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEE--CCSCHHHHHHHHHHHHHHHH-HH
T ss_pred             EeCCC----CCHHHHHHHHHHhhhhhhCCEEEEeCcccccCCCCCCCEEEEE--EcCCHHHHHHHHHHHHHHHH-Hh
Confidence            98874    4677899998865      5666553         25799999  56789999999999999998 54

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.87  E-value=5.6e-22  Score=178.44  Aligned_cols=266  Identities=14%  Similarity=0.094  Sum_probs=163.9

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCC-----------cccccC-------CCHHHHHHHHHhcCCcEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-----------HLKVDF-------GDITALEKIFKESGDQIAGFL   65 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-------~d~~~le~~i~~~~~~~~~v~   65 (306)
                      .|++..|+.++-...+.++..+.+..-...|.|+.           ++.+|.       .+++.+++.++   +++++++
T Consensus       103 ~I~it~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~l~~~~~---~~~~~~~  179 (412)
T d1bw0a_         103 NVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKD---DKTKLLI  179 (412)
T ss_dssp             GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCC---TTEEEEE
T ss_pred             eEEEecccccchhhhhhhhhccccceeeeeccchhhhhhhhccCccccccccccccccchhhHHHHhhhh---ccccccc
Confidence            57777777777766666665554433333345543           122221       36788877665   5789999


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc--cc---CCCCCc---EEEeccccc-CCcc
Q 021893           66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS--DW---EEVRPD---MVILGKALG-GGVI  136 (306)
Q Consensus        66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~--~~---~~~~~d---~~s~sK~~~-~G~~  136 (306)
                      +++++|++|.+ .+++.+++|.++|++|+++||+||+|.++.+.+.....  ..   ......   +.++||.++ +|+ 
T Consensus       180 l~np~NPtG~~-~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~G~-  257 (412)
T d1bw0a_         180 VTNPSNPCGSN-FSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGW-  257 (412)
T ss_dssp             EESSCTTTCCC-CCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGG-
T ss_pred             ccccccccccc-chhhhccccccccccCCeeeechhhHHHhccCCCCCccccccccccccccccccccccCccCccCCC-
Confidence            99999999965 58999999999999999999999999987666542211  11   111111   237899998 899 


Q ss_pred             cceeeEeCHHHH------hhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceee
Q 021893          137 PVSAVLADKEVM------LCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKE  210 (306)
Q Consensus       137 ~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~  210 (306)
                      |+||++++++..      ...... .......+...++++...+... .++....+++..+..++.+.+.....+++...
T Consensus       258 RvG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~l~~~~g~~~~  335 (412)
T d1bw0a_         258 RLGWLLYVDPHGNGPSFLEGLKRV-GMLVCGPCTVVQAALGEALLNT-PQEHLDQIVAKIEESAMYLYNHIGECIGLAPT  335 (412)
T ss_dssp             CCEEEEEECTTCSCHHHHHHHHHH-HHHHTCSCHHHHHHHHHHHHSS-CHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEC
T ss_pred             Ccccccccchhhcchhhhhhhccc-cccccCCchhhhhhcccccccc-cccccccccchhHHHHHHHHHHHHHhcCceec
Confidence            999998864322      111110 1111222334333333222111 11122222222222223333322222234445


Q ss_pred             EEEeeeEEEEEEecCC--ChhhHHHHHHHHHHC-CceeccC----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          211 VRGRGLFNAVEFDKTA--LPVSAYDICLKMKER-GILAKPT----HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       211 ~~~~g~~~~i~~~~~~--~~~~~~~~~~~l~~~-Gi~~~~~----~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .+..|.++|+.++...  ...+..+|++.|+++ ||.+.|+    .++++|++  +..++++++++++||+++++
T Consensus       336 ~p~gg~~l~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~iRis--~~~~~e~l~eal~Rl~~~l~  408 (412)
T d1bw0a_         336 MPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLT--TTRPVEVYREAVERIKAFCQ  408 (412)
T ss_dssp             CCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEE--CCSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCceEEEEeCChhhcCCCCCHHHHHHHHHHhCCEEEEeccccCCCCeEEEE--EcCCHHHHHHHHHHHHHHHH
Confidence            5667888888776321  123577899988765 9999985    47899999  56789999999999999998

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=4.9e-22  Score=177.10  Aligned_cols=261  Identities=15%  Similarity=0.152  Sum_probs=180.6

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCCCCc-----------cccc------CCCHHHHHHHHHhcCCcEEEEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGH-----------LKVD------FGDITALEKIFKESGDQIAGFLF   66 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~------~~d~~~le~~i~~~~~~~~~v~v   66 (306)
                      .|++..|+.+|-..+..++..+....-...|.++..           ...+      ..|++++++.+.   ++++++++
T Consensus        89 ~I~vt~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i~l  165 (382)
T d1u08a_          89 DITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPPHFRVDWQEFAALLS---ERTRLVIL  165 (382)
T ss_dssp             TEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCC---TTEEEEEE
T ss_pred             eEEeccchHHHHHHHHhhcccccceEEEecccccchhhhhhhccccceecccccccccCCHHHHhhhhc---cCccEEEE
Confidence            588899999998888888877665544444555541           1111      136888887776   57888888


Q ss_pred             ccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc--c---cCCCCCcEEEeccccc-CCccccee
Q 021893           67 EPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS--D---WEEVRPDMVILGKALG-GGVIPVSA  140 (306)
Q Consensus        67 ~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~--~---~~~~~~d~~s~sK~~~-~G~~~~g~  140 (306)
                      ++++|++|.+ .+.+.+++|.++|++++++++.|+.|..+...+.....  .   ..+....+.++||.++ +|+ |+||
T Consensus       166 ~~P~NPtG~v-~~~~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~-RiG~  243 (382)
T d1u08a_         166 NTPHNPSATV-WQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGW-KVGY  243 (382)
T ss_dssp             ESSCTTTCCC-CCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGG-CCEE
T ss_pred             CCCCcccccc-cccccchhhhhhhccccceeeeecchhhccccccccccccccccccCcEEEEeeccccccCCcc-cchh
Confidence            8889999965 57999999999999999999999999854333321111  0   0112234558999998 999 9999


Q ss_pred             eEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEE
Q 021893          141 VLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV  220 (306)
Q Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i  220 (306)
                      +++++++++.+........++.+.+.+.++..+++..  ++..+.+++..+..++.+.+..... ++....+..|.++|+
T Consensus       244 ~v~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~~p~gg~~~~~  320 (382)
T d1u08a_         244 CVAPAPISAEIRKVHQYLTFSVNTPAQLALADMLRAE--PEHYLALPDFYRQKRDILVNALNES-RLEILPCEGTYFLLV  320 (382)
T ss_dssp             EECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHC--THHHHTHHHHHHHHHHHHHHHTTSS-SCEECCCCBSSEEEE
T ss_pred             hhccchhHHHHHhhhcccccccccccccccccccccc--hHHHHHHHHHHHhhhhhhhhhhccC-CcEEecCCceEEEEE
Confidence            9999999888766555556777888888888777643  2233333333333333333332222 244455677888898


Q ss_pred             EEecCCChhhHHHHHHHHH-HCCceeccC--------CCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          221 EFDKTALPVSAYDICLKMK-ERGILAKPT--------HDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       221 ~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~--------~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      .++... ..+..+|++.|+ ++||.+.|+        +.+++|++  +..++++++++++||++
T Consensus       321 ~~~~~~-~~d~~e~~~~ll~e~gV~v~PG~~F~~~~~~~~~~Ris--~~~~~e~l~~al~RL~~  381 (382)
T d1u08a_         321 DYSAVS-TLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLC--FAKKESTLLAAAERLRQ  381 (382)
T ss_dssp             ECTTTC-CSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEE--CCSCHHHHHHHHHHHTT
T ss_pred             ecCCCC-CCCHHHHHHHHHHHCCEEEEcchhhCCCCCCCCEEEEE--EeCCHHHHHHHHHHHhC
Confidence            887432 346778998876 569999874        34689999  55688999999999875

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=99.86  E-value=1.3e-21  Score=172.60  Aligned_cols=202  Identities=17%  Similarity=0.203  Sum_probs=141.0

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc--ccCCCCCcEEEeccccc-CCc
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS--DWEEVRPDMVILGKALG-GGV  135 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~--~~~~~~~d~~s~sK~~~-~G~  135 (306)
                      ++++++++++++|++|.. .+.+.+++|.++|++|++++|+||+|.+|...+.....  ...+....+.|+||.++ +|+
T Consensus       143 ~~~~~v~l~nP~NPtG~~-~~~e~l~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~Gl  221 (355)
T d1lc5a_         143 PDLDCLFLCTPNNPTGLL-PERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGL  221 (355)
T ss_dssp             TTCCEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTT
T ss_pred             cccceeeeecccCccccc-chhhhhhhhhhhccccccccccccceeeeeeecccccccccccccceeecccccccccccc
Confidence            578888888889999965 58999999999999999999999999977555443211  11122234459999999 999


Q ss_pred             ccceeeEeCHH-HHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE
Q 021893          136 IPVSAVLADKE-VMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG  213 (306)
Q Consensus       136 ~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~  213 (306)
                       |+||++++++ +.+.++.  ...++..+.+++.++.++++.-.. .+..+++++..+++.+.|.++    + .....+.
T Consensus       222 -R~G~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~----~-~~~~~p~  293 (355)
T d1lc5a_         222 -RLGYLVNSDDAAMARMRR--QQMPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQL----P-LLTVYPG  293 (355)
T ss_dssp             -CCEEEECCCHHHHHHHHH--HSCTTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTS----T-TEEECCC
T ss_pred             -cccceeccchhhhHHHHh--hcCCccccccccccccccccccchhHHHHHHHHHHHHHHHHHHhhc----C-CcEECCC
Confidence             9999998755 4444432  334566778888887776653211 122334444444444444433    1 3333456


Q ss_pred             eeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          214 RGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------HDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       214 ~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      .|+++|+.++.     +..++++.|.++||.++++      .++++||+++   +++++++++++|++++
T Consensus       294 ~~~f~~~~~~~-----~~~~~~~~L~~~gv~vr~~~~f~~~~~~~iRis~~---~~~e~~~li~aL~~il  355 (355)
T d1lc5a_         294 RANYLLLRCER-----EDIDLQRRLLTQRILIRSCANYPGLDSRYYRVAIR---SAAQNERLLAALRNVL  355 (355)
T ss_dssp             SSSEEEEEESC-----TTCCHHHHHHTTTEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHHHHHHC
T ss_pred             CCEEEEEECCC-----CHHHHHHHHHHCCcEEEeCccCCCCCCCEEEEEeC---CHHHHHHHHHHHHHhC
Confidence            77888887764     3457899999999999864      3589999943   7899999999998864

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=7.1e-20  Score=161.26  Aligned_cols=250  Identities=15%  Similarity=0.101  Sum_probs=160.9

Q ss_pred             ceEEEEecCCCCcccchhcccCCccc-cccCCCCCCC-----------cccccC-----CCHHHHHHHHHhcCCcEEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEA-IRGFGPLLPG-----------HLKVDF-----GDITALEKIFKESGDQIAGFL   65 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~-~~~~~~~~~~-----------~~~~~~-----~d~~~le~~i~~~~~~~~~v~   65 (306)
                      ..|++.+|+.++-.....+...+... .-...|.++.           +..++.     .|++.+++.+    +++++++
T Consensus        74 e~I~it~Gs~eai~~~~~~~~~pgd~~Vl~~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~d~~~l~~~~----~~~~~v~  149 (354)
T d1fg7a_          74 EQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKL----DGVKVVY  149 (354)
T ss_dssp             GGEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHHHHHTSC----TTEEEEE
T ss_pred             HHeeeccCchHHHHHHHHHhhccccccccccccccccchhhhhccCceeeccccccccccchhhhhhcc----cccceee
Confidence            46888888888888777777765432 2223355544           122222     2577776544    3689999


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc-ccCCCCCcEEEeccccc-CCcccceeeEe
Q 021893           66 FEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS-DWEEVRPDMVILGKALG-GGVIPVSAVLA  143 (306)
Q Consensus        66 v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~-~~~~~~~d~~s~sK~~~-~G~~~~g~~~~  143 (306)
                      +++++|++|... +++.++.+.+.++ ++.++|+||+|.+|......... ........+-||||.++ +|+ |+||+++
T Consensus       150 ~~~pnNPtG~~~-~~~~~~~~~~~~~-~~~~~iidd~~~~f~~~~~~~~~~~~~~~~iv~~S~SK~~~laGl-RiGy~i~  226 (354)
T d1fg7a_         150 VCSPNNPTGQLI-NPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGL-RCGFTLA  226 (354)
T ss_dssp             EESSCTTTCCCC-CHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGG-CCEEEEE
T ss_pred             ccCCCccceeEe-eeccccccccccc-ccccccccccchhhccccccchhhcccccceEEeCCccccCCCcc-ccccccc
Confidence            999999999664 7888888887775 67778888888766433332211 11111112349999999 999 9999999


Q ss_pred             CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEE
Q 021893          144 DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEK---LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAV  220 (306)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i  220 (306)
                      ++++++.+...  ...+..+.+.+.++.+++..-....   ..+++.+.++.+.+.+.++.    ......+..++++|+
T Consensus       227 ~~~~i~~l~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~----~~~~~~p~~~~f~~~  300 (354)
T d1fg7a_         227 NEEVINLLMKV--IAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIP----CVEQVFDSETNYILA  300 (354)
T ss_dssp             CHHHHHHHHHH--SCSSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHST----TEEEECCCSSSEEEE
T ss_pred             cchhhhhhhhh--cCccchhhHHHHHHHHHHhhhccccccccchhhhhHHHHHHHHHHhCC----CcceeCCCCceEEEE
Confidence            99999887642  2344455555555444432221111   22334444444544444432    222334567788888


Q ss_pred             EEecCCChhhHHHHHHHHHHCCceeccC-----CCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893          221 EFDKTALPVSAYDICLKMKERGILAKPT-----HDTIVRLTPPLSISSNELQEGSKALH  274 (306)
Q Consensus       221 ~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~~lRi~~~~~~t~~~i~~~~~~l~  274 (306)
                      .++      ++.++++.|+++||+++++     .++++|++.   -++++++.++++|+
T Consensus       301 ~~~------~~~~~~~~L~~~gIlvr~~~~~~~~~~~lRisi---gt~ee~~~~l~aLk  350 (354)
T d1fg7a_         301 RFK------ASSAVFKSLWDQGIILRDQNKQPSLSGCLRITV---GTREESQRVIDALR  350 (354)
T ss_dssp             EET------THHHHHHHHHHTTEECEECTTSTTCTTEEEEEC---CCHHHHHHHHHHHH
T ss_pred             eCC------CHHHHHHHHHHCCcEEecCCCCCCCCCEEEEEe---CCHHHHHHHHHHHh
Confidence            775      3567999999999999864     368999984   37888888888775

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=4.6e-19  Score=158.84  Aligned_cols=251  Identities=15%  Similarity=0.111  Sum_probs=167.5

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+||+....||+.......+.......-.+.|..+. .   .-|++.++++++   ++|++|.++.+++.+|.+.|   
T Consensus       112 g~~il~~~~e~~s~~~~~~~~a~~~g~~v~~~~~~~~-g---~~~~~~~~~~i~---~~t~lv~~~~v~~~tG~~~p---  181 (405)
T d1jf9a_         112 GDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPD-G---TLQLETLPTLFD---EKTRLLAITHVSNVLGTENP---  181 (405)
T ss_dssp             TCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTT-S---CBCGGGHHHHCC---TTEEEEEEESBCTTTCCBCC---
T ss_pred             CCEEEEEeCcccchHHHHHHHHHHcCcEEEEECCCCC-C---cCCHHHHHHhcc---CCcEEEEEecCCCcccccCc---
Confidence            3567777888877666555443211111111111110 0   125777777776   68999999999999999999   


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhccccccc-ccccccCCCCCcEE--EecccccCCcccceeeEeCHHHHhhcCCCCcc-
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHG-  157 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~~~~~~~d~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~-  157 (306)
                       +++|.++|+++|+++++|.+|+    .|. .+..+.  ..+|++  +..|.+ |+. ++|+++.+++.++.+.+.... 
T Consensus       182 -i~~i~~~~~~~g~~~~vD~~q~----~g~~~id~~~--~~~D~~~~s~hK~~-Gp~-G~g~l~v~~~~~~~~~~~~~~~  252 (405)
T d1jf9a_         182 -LAEMITLAHQHGAKVLVDGAQA----VMHHPVDVQA--LDCDFYVFSGHKLY-GPT-GIGILYVKEALLQEMPPWEGGG  252 (405)
T ss_dssp             -HHHHHHHHHHTTCEEEEECTTT----TTTSCCCHHH--HTCSEEEEEGGGTT-SCS-SCEEEEECHHHHTTCCCSSCSS
T ss_pred             -hHHhhhHHHHcCCeeeccccee----ccccccchhh--cCCceeeccccccc-cCC-CceeeeechhhhcccCcccccc
Confidence             9999999999999999999997    222 222333  345665  455986 455 789999999988766543111 


Q ss_pred             ---------------------CCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE
Q 021893          158 ---------------------STFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRG  213 (306)
Q Consensus       158 ---------------------~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~  213 (306)
                                           ...+.+..+..++.++++.+.+   +.+.++.+.+.+++.+.++.....   .......
T Consensus       253 ~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~L~~~~~~~l~~~~~~---~~~~~~~  329 (405)
T d1jf9a_         253 SMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDL---TLYGPQN  329 (405)
T ss_dssp             SSEEECCTTTCCEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTE---EEESCTT
T ss_pred             cccCccccccccccccchhhhcCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHhhhhcCCcc---cccCCcC
Confidence                                 1124567788888888887765   334445555555444444433211   1112223


Q ss_pred             eeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          214 RGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       214 ~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .+..+.+.++.    .++.++...|.++||.++.+            .++++|++++.++|++||+.+++.|+++++
T Consensus       330 r~~ivsf~~~~----~~~~~~~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~iRiS~~~ynt~eDid~l~~~l~~i~r  402 (405)
T d1jf9a_         330 RLGVIAFNLGK----HHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHR  402 (405)
T ss_dssp             CCSEEEEEETT----CCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             cCcEEEEEcCC----CCHHHHHHHHHHCCcEEEccchhhhhHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence            44566676653    55778888998999998642            367899999999999999999999998876

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.80  E-value=1.6e-18  Score=155.32  Aligned_cols=211  Identities=15%  Similarity=0.168  Sum_probs=152.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      +.+.++++++   ++|++|.+.++++.+|.+.+    +++|.++|+++|+++++|.+|+    .|.. .++...+.+|++
T Consensus       152 ~~~~l~~~~~---~~t~lv~i~~~~~~tG~~~p----~~~i~~~~~~~g~~~ivDa~q~----~g~~-~id~~~~~~D~~  219 (408)
T d1t3ia_         152 DLEHFKTLLS---EKTKLVTVVHISNTLGCVNP----AEEIAQLAHQAGAKVLVDACQS----APHY-PLDVQLIDCDWL  219 (408)
T ss_dssp             CHHHHHHHCC---TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHTTCEEEEECTTT----TTTS-CCCHHHHTCSEE
T ss_pred             cHHHhhhccC---CCceEEEEecccccccccCc----HHHHhhhhhccCceeeecccee----cccc-cccccccCCceE
Confidence            6788888776   68999999999999999999    9999999999999999999997    2221 123223346766


Q ss_pred             Eec--ccccCCcccceeeEeCHHHHhhcCCCCcc---------------------CCCCCCHHHHHHHHHHHHHHhh---
Q 021893          126 ILG--KALGGGVIPVSAVLADKEVMLCIQPGEHG---------------------STFGGNPLASAVAIASLDVIRD---  179 (306)
Q Consensus       126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~aa~~al~~~~~---  179 (306)
                      ++|  |.+ |+. ++|+++.+++......+...+                     ...+.+..+++++.++++.+.+   
T Consensus       220 ~~s~hK~~-gp~-G~g~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~~l~~al~~~~~~g~  297 (408)
T d1t3ia_         220 VASGHKMC-APT-GIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGM  297 (408)
T ss_dssp             EEEGGGTT-SCT-TCEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCH
T ss_pred             Eecccccc-CCC-CccccccchhhhhcCCceecCCcccccccccccccCCchhhhcCCcHHHHHHHHHHHHHHHHHHcCH
Confidence            555  974 555 789999999987766543211                     1224567777777888888765   


Q ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhCCCceee-----EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC------
Q 021893          180 EKLAERSAHLGEELRQHLFKIQQQFPNYVKE-----VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT------  248 (306)
Q Consensus       180 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-----~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------  248 (306)
                      +++.++..++.+++.+.++...    .....     ....+..+.+.++    +.+..++...|.++||.++.+      
T Consensus       298 ~~i~~~~~~l~~~l~~~~~~~~----~~~~~~~~~~~~~~~~iv~f~~~----~~~~~~v~~~L~~~gI~v~~G~~c~~~  369 (408)
T d1t3ia_         298 ENIHNYEVELTHYLWQGLGQIP----QLRLYGPNPKHGDRAALASFNVA----GLHASDVATMVDQDGIAIRSGHHCTQP  369 (408)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCT----TEEEESCCGGGSCBCSEEEEEET----TBCHHHHHHHHHTTTEECBCSCTTCHH
T ss_pred             HHHHHHHHHHHhHHhhhhccCc----cccccCCCccccCcceEEEEEeC----CCCHHHHHHHHhhCCcEEecCcccccH
Confidence            3455566666666665555432    12111     1123455566665    356788999999999998743      


Q ss_pred             ------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 ------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 ------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                            ..+++|++++.++|++||+.+++.|+++++
T Consensus       370 ~~~~~~~~g~vRiS~~~ynt~~did~li~~L~~~~~  405 (408)
T d1t3ia_         370 LHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIR  405 (408)
T ss_dssp             HHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             HHHhhcCCccEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence                  357899999999999999999999999987

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.80  E-value=5.8e-19  Score=156.71  Aligned_cols=204  Identities=16%  Similarity=0.208  Sum_probs=145.1

Q ss_pred             CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc----CCEEEEehhhhcccccccccccccCCCCCcEE--Eecccc
Q 021893           58 GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY----NILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKAL  131 (306)
Q Consensus        58 ~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~----gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~  131 (306)
                      .+++++++++++++++|.+.+    +++|.++|+++    ++++++|.+|+ +   |.. ..+.....+|++  ++.|.+
T Consensus       143 ~~~t~~v~i~~~~n~tG~~~~----~~~I~~l~~~~~~~~~~~~~vD~~~~-~---g~~-~~~~~~~~~D~~~~s~~K~~  213 (381)
T d1elua_         143 GPKTRLVILSHLLWNTGQVLP----LAEIMAVCRRHQGNYPVRVLVDGAQS-A---GSL-PLDFSRLEVDYYAFTGHKWF  213 (381)
T ss_dssp             CTTEEEEEEESBCTTTCCBCC----HHHHHHHHHHCCSSSCCEEEEECTTT-B---TTB-CCCTTTSCCSEEEEESSSTT
T ss_pred             cccccccccccccccccccch----hhHHHHHHhhcccccccccccccccc-c---ccc-cccccccccccccccccccc
Confidence            478999999999999999999    99999999985    69999999997 2   221 123334456766  455999


Q ss_pred             cCCcccceeeEeCHHHHhhcCCCCcc----------------------CCCCCCHHHHHHHHHHHHHHhhc----cHHHH
Q 021893          132 GGGVIPVSAVLADKEVMLCIQPGEHG----------------------STFGGNPLASAVAIASLDVIRDE----KLAER  185 (306)
Q Consensus       132 ~~G~~~~g~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~aa~~al~~~~~~----~~~~~  185 (306)
                      ++.. ++|+++.+++..+.+.+....                      ...+.+.....++.++++.+...    ...++
T Consensus       214 ~~p~-G~g~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~~  292 (381)
T d1elua_         214 AGPA-GVGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQA  292 (381)
T ss_dssp             CCCT-TCEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred             cccc-hhhHHHhhHHHHHhcCcccccccccccccccccccccccccccccccccchhhhhhhhhhhhHHHhcccccchhh
Confidence            9877 889999999888777643111                      11134556666677777776552    23466


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-CCCEEEEeCCCCCCHH
Q 021893          186 SAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-HDTIVRLTPPLSISSN  264 (306)
Q Consensus       186 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-~~~~lRi~~~~~~t~~  264 (306)
                      ..++.+++.+.|+++....  ........+.++++.+..   ....+++.+.|.++||.++.. .++++|++++.++|++
T Consensus       293 ~~~~~~~l~~~L~~~~~~~--~~~~~~~~~~~vsf~~~~---~~~~~~i~~~L~~~gi~v~~~~~~~~lRis~~~~nt~e  367 (381)
T d1elua_         293 ICQRSEFLWRGLNQLPHVH--CLATSAPQAGLVSFTVDS---PLGHRAIVQKLEEQRIYLRTIADPDCIRACCHYITDEE  367 (381)
T ss_dssp             HHHHHHHHHHHHHHSTTEE--ESCSSCCSSSEEEEEECS---SSCHHHHHHHHHHTTEECEEETTTTEEEEECCTTCCHH
T ss_pred             hhhHHHHHHHHHhcCCCeE--ecCCCCccccEEEEEcCC---CCCHHHHHHHHHhCCcEEEecCCCCEEEEecCCCCCHH
Confidence            6677777777777753110  111112345566776654   345678899999999998753 4789999999999999


Q ss_pred             HHHHHHHHHHHH
Q 021893          265 ELQEGSKALHDV  276 (306)
Q Consensus       265 ~i~~~~~~l~~~  276 (306)
                      ||++++++|+++
T Consensus       368 did~ll~~l~e~  379 (381)
T d1elua_         368 EINHLLARLADF  379 (381)
T ss_dssp             HHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhh
Confidence            999999988753

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=99.79  E-value=1.3e-19  Score=162.29  Aligned_cols=217  Identities=16%  Similarity=0.075  Sum_probs=141.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc------ccC-
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS------DWE-  118 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~------~~~-  118 (306)
                      |++.+++.+....++++++++++++|+||. +.+++.+++|.++|++|++++|+||+|.++.+.+.....      ... 
T Consensus       161 ~~~~~~~~~~~~~~~~~~iii~~p~NPTG~-~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~  239 (401)
T d7aata_         161 DFTGAMEDISKIPEKSIILLHACAHNPTGV-DPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQG  239 (401)
T ss_dssp             CHHHHHHHHTTSCTTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTT
T ss_pred             cHHHHHHHHhcCCCceEEEEecCCCCCccc-cCCHHHHHHHHHHHhcceEEEEEeccchhhhcCCcccchhhhhhhhhhh
Confidence            688888888766678999999999999995 568999999999999999999999999987655432111      111 


Q ss_pred             CCCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCC-------CccCCCCCCHHHHHHHHHHHHHH------hh--ccH
Q 021893          119 EVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPG-------EHGSTFGGNPLASAVAIASLDVI------RD--EKL  182 (306)
Q Consensus       119 ~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~aa~~al~~~------~~--~~~  182 (306)
                      .....+.++||.++ .|+ |+||++++.++.+.....       ......+.+.+.+.++...++.-      ..  +..
T Consensus       240 ~~~~~~~s~sk~~~~~G~-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~  318 (401)
T d7aata_         240 IDVVLSQSYAKNMGLYGE-RAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGM  318 (401)
T ss_dssp             CCCEEEEECTTTSCCGGG-CEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             cccceeEeccccceeecc-ccceeecchHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence            11223458899998 899 999999887655443221       11112234445544444333211      00  223


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccCCCCEEEEeCCCCC
Q 021893          183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTHDTIVRLTPPLSI  261 (306)
Q Consensus       183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~~~lRi~~~~~~  261 (306)
                      .++++++++.+.+.|++.+... .+....+..|+++|+.++        .+++++|+ ++||++.|+    +||++. ..
T Consensus       319 ~~~~~~~r~~l~~~L~~~~~~~-~~~~~~~~~G~F~~~~ls--------~e~~~~L~~e~gV~~~pg----~Ris~a-~~  384 (401)
T d7aata_         319 ADRIISMRTQLVSNLKKEGSSH-NWQHITDQIGMFCFTGLK--------PEQVERLTKEFSIYMTKD----GRISVA-GV  384 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCS-CCHHHHHCCSSEEECCCC--------HHHHHHHHHHHCEECCTT----CEEEGG-GC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCC-CcceECCCCeEEEecCCC--------HHHHHHHHHhCCEEECCC----cEEEec-cC
Confidence            4455555566666666554221 122234567777776443        24566664 569999886    599853 35


Q ss_pred             CHHHHHHHHHHHHHHHh
Q 021893          262 SSNELQEGSKALHDVLE  278 (306)
Q Consensus       262 t~~~i~~~~~~l~~~l~  278 (306)
                      ++++|+.+.++|.++++
T Consensus       385 ~~~~i~~la~ai~~v~k  401 (401)
T d7aata_         385 ASSNVGYLAHAIHQVTK  401 (401)
T ss_dssp             CTTTHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHHhC
Confidence            77889999999888753

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.78  E-value=7e-19  Score=155.49  Aligned_cols=246  Identities=12%  Similarity=0.025  Sum_probs=150.5

Q ss_pred             ceEEEEecCCCCcccchhcccCCcccc-ccCCCCCCC---------cccccCCCHHHHHHHHHhcCCcEEEEEEccccCC
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAI-RGFGPLLPG---------HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGE   72 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~-~~~~~~~~~---------~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~   72 (306)
                      ..|++++|+++|.....+++..+.... -...|.++.         ..+++++|+++|+++|+   ++|++|+++.++|+
T Consensus        69 e~~~~~~~~~~a~~~~l~al~~~~~vi~~~~~~~~~~~~~~~~l~g~~~v~~~d~e~l~~~i~---~~tk~i~~~~p~n~  145 (366)
T d2aeua1          69 DKCVGFNRTSSAILATILALKPKKVIHYLPELPGHPSIERSCKIVNAKYFESDKVGEILNKID---KDTLVIITGSTMDL  145 (366)
T ss_dssp             EEEEEESSHHHHHHHHHHHHCCSEEEEECSSSSCCTHHHHHHHHTTCEEEEESCHHHHHTTCC---TTEEEEEECBCTTS
T ss_pred             cEEEEeCCHHHHHHHHHHHhCCCCEEEEecCCCcchhHHHHHHhcCCeEECCCCHHHHHHhcC---CCceEEEEEecCCC
Confidence            468899999999877777766544321 111222222         45667789999998887   68999999887665


Q ss_pred             CCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccc--cccccccccCCCCCcEE--EecccccCCcccceeeEeCHHHH
Q 021893           73 AGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR--SGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAVLADKEVM  148 (306)
Q Consensus        73 ~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~--~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~g~~~~~~~~~  148 (306)
                      ++   .+.+.|++|.++|++||+++++||+|+...+  .+... ....+  .|++  |+||.+ +|+ ++||++++++++
T Consensus       146 ~~---~~~~~l~~i~~ia~~~~~~~i~De~y~~~~~~~~~~~~-~~~~~--~di~~~S~sK~~-~g~-~~G~i~~~~~~i  217 (366)
T d2aeua1         146 KV---IELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPP-ALKLG--ADLVVTSTDKLM-EGP-RGGLLAGKKELV  217 (366)
T ss_dssp             CB---CCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCC-HHHHT--CSEEEEETTSSS-SSC-SCEEEEEEHHHH
T ss_pred             Cc---CCHHHHHHHHHHhccCcEEEEEecCccccccccccCCC-HhhcC--ceEEEecccccc-ccc-ceeEEEecHHHH
Confidence            42   2445599999999999999999999973211  12211 11223  4555  555655 578 999999999999


Q ss_pred             hhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHH---HHHHHHHHHHHHHHHHHHhhCCCceeeE-EE-eeeEEEEEEe
Q 021893          149 LCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLA---ERSAHLGEELRQHLFKIQQQFPNYVKEV-RG-RGLFNAVEFD  223 (306)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~---~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~-~g~~~~i~~~  223 (306)
                      +.++......+++.+++.+.++..+++.+...++.   ++.++....+.+.+.......+...... .. ...+++....
T Consensus       218 ~~~~~~~~~~g~~~~~~~~~a~~~aL~tl~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (366)
T d2aeua1         218 DKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVY  297 (366)
T ss_dssp             HHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEE
T ss_pred             HHHHHHHhcccccCCHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhhhccccccccccCcccccCccchhccCCC
Confidence            98876555555667778788877777654322222   2222222334444444433322122111 11 2223333333


Q ss_pred             cCC--ChhhHHHHHHHHHHC-CceeccC-----CCCEEEEeCCC
Q 021893          224 KTA--LPVSAYDICLKMKER-GILAKPT-----HDTIVRLTPPL  259 (306)
Q Consensus       224 ~~~--~~~~~~~~~~~l~~~-Gi~~~~~-----~~~~lRi~~~~  259 (306)
                      ...  ......+++..|+++ ||.+.|+     +.+++||+...
T Consensus       298 ~~~~~~~~~~~~~a~~Ll~~~gV~~ip~~~~p~~~~~lRis~~~  341 (366)
T d2aeua1         298 KDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTS  341 (366)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTS
T ss_pred             cceeecccCHHHHHHHHHHhCCEEEEECCCCCCCCCEEEEeccc
Confidence            211  012355788888766 9988763     46799999643

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=99.78  E-value=1.1e-18  Score=156.76  Aligned_cols=217  Identities=13%  Similarity=0.130  Sum_probs=145.1

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc-------cccC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA-------SDWE  118 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~-------~~~~  118 (306)
                      +.+.+++.+...+++++++++++++|+||. +.+++.+++|.++|+++++++|+||+|.++.+.+....       ....
T Consensus       162 ~~~~~~~~~~~~~~~~~~i~i~~P~NPTG~-~~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~  240 (412)
T d1yaaa_         162 DLNGFLNAIQKAPEGSIFVLHSCAHNPTGL-DPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKL  240 (412)
T ss_dssp             CHHHHHHHHHHSCTTCEEEEECSSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHT
T ss_pred             cchhhhcccccCCCceEEEEecCCCCCccc-cCCHHHHHHHHhhhccCCEEEeecceeeecccCCcccchhhhhhhhhcc
Confidence            678888888877778899999999999995 46899999999999999999999999998765543110       0111


Q ss_pred             CCC---CcEEEeccccc-CCcccceeeEeCHHHHhhcCC-----------CCccCCCCCCHHHHHHHHHHHHHHh-----
Q 021893          119 EVR---PDMVILGKALG-GGVIPVSAVLADKEVMLCIQP-----------GEHGSTFGGNPLASAVAIASLDVIR-----  178 (306)
Q Consensus       119 ~~~---~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~aa~~al~~~~-----  178 (306)
                      ...   .-+.|+||.++ .|+ |+||++++.++++.+..           .......+.+.+++.++...++.-.     
T Consensus       241 ~~~~~~i~~~s~SK~~~~~G~-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~  319 (412)
T d1yaaa_         241 STVSPVFVCQSFAKNAGMYGE-RVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQW  319 (412)
T ss_dssp             TTTCCEEEEEECTTTSCCGGG-CEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHH
T ss_pred             ccCCCeEEEEecCCccccCcC-ceEEEEEchhhhhhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHhcChHHHHHH
Confidence            222   23448999999 899 99999987654332211           1123334556666666655544221     


Q ss_pred             -h--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccCCCCEEE
Q 021893          179 -D--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTHDTIVR  254 (306)
Q Consensus       179 -~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~~~lR  254 (306)
                       .  +...+.++++++.+.+.|++.+... .+....+..|++.|+.++        .++++.|+ ++||++.|+    .|
T Consensus       320 ~~~~~~~~~~~~~~r~~l~~~L~~~g~~~-~~~~~~~~gG~F~~~~ls--------~e~~~~L~~e~~V~~~~g----~R  386 (412)
T d1yaaa_         320 HKDMVTMSSRITKMRHALRDHLVKLGTPG-NWDHIVNQCGMFSFTGLT--------PQMVKRLEETHAVYLVAS----GR  386 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTCSS-CCTHHHHCCSSEEECCCC--------HHHHHHHHHHHCEECCTT----SE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCC-CCceeCCCceEEEecCcC--------HHHHHHHHHhCCEEECCC----CE
Confidence             1  2345566666666666776654321 122233456666665332        24566665 559999886    38


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          255 LTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       255 i~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      |++. ..++++|+.+.++|.++++
T Consensus       387 is~~-g~~~~~i~~l~~ai~~v~k  409 (412)
T d1yaaa_         387 ASIA-GLNQGNVEYVAKAIDEVVR  409 (412)
T ss_dssp             EEGG-GCCTTTHHHHHHHHHHHHH
T ss_pred             EEec-cCCHHHHHHHHHHHHHHHH
Confidence            8853 3567889999999999887

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=99.78  E-value=4.5e-19  Score=159.20  Aligned_cols=220  Identities=12%  Similarity=0.100  Sum_probs=140.9

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccc---ccc----ccC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRM---LAS----DWE  118 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~---~~~----~~~  118 (306)
                      |++.+++.+.+..++++++++++++|+||. +++++.+++|.++|++||+++|+||+|.++.+.+..   ++.    ...
T Consensus       169 d~~~~~~~~~~~~~~~~~il~~~P~NPTG~-v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~  247 (412)
T d1ajsa_         169 DLQGFLSDLENAPEFSIFVLHACAHNPTGT-DPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEG  247 (412)
T ss_dssp             CHHHHHHHHHHSCTTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTT
T ss_pred             cHHHHHHHHHhccCCcEEEEecCCCCCcCC-CCCHHHHHHHHHHHhhCCEEEEecHhhhhhhcCCcccchhhhhhhhhhc
Confidence            678888888776678999999999999995 568999999999999999999999999987655431   111    111


Q ss_pred             CCCCcEEEeccccc-CCcccceeeEeCHHHHhhcCC-------CCccCCCCCCHHHHHHHHHHHHHH------hh--ccH
Q 021893          119 EVRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVI------RD--EKL  182 (306)
Q Consensus       119 ~~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~------~~--~~~  182 (306)
                      .....+.++||.++ .|+ |+||+++.....+.+..       .......+.+..++.++...+...      ..  +..
T Consensus       248 ~~~~~~~s~sk~~~~~G~-R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (412)
T d1ajsa_         248 FELFCAQSFSKNFGLYNE-RVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTM  326 (412)
T ss_dssp             CCEEEEEECTTTSCCGGG-CEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccCCCC-CccccccchhHHHHHHHHHHHHHHHhhccccccchHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            11223448899998 899 99999887543332221       112222334445554444333211      11  223


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHH-HHCCceeccCCCCEEEEeCCCCC
Q 021893          183 AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKM-KERGILAKPTHDTIVRLTPPLSI  261 (306)
Q Consensus       183 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~~~~~lRi~~~~~~  261 (306)
                      .++++++++.+.+.|++..... .+.......|++.|+.+.       . ++++.| .++||++.|++    ||++. ..
T Consensus       327 ~~~l~~~r~~l~~~L~~~~~~~-~~~~i~~~~G~F~~~~ls-------~-~~v~~L~~e~gV~~vpg~----Ri~~a-g~  392 (412)
T d1ajsa_         327 ADRILSMRSELRARLEALKTPG-TWNHITDQIGMFSFTGLN-------P-KQVEYLINQKHIYLLPSG----RINMC-GL  392 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCSS-CCHHHHHCCSSEEECCCC-------H-HHHHHHHHTTCEECCTTS----EEEGG-GC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCC-CeeeecCCCeEEEecCCC-------H-HHHHHHHHhCCEEEeCCC----eEEec-cC
Confidence            4455555666666666553221 111223456666554332       2 344555 56699998864    88843 35


Q ss_pred             CHHHHHHHHHHHHHHHhhhcC
Q 021893          262 SSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       262 t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      ++++|+.++++|+++++ +++
T Consensus       393 ~~~~i~~~a~aI~~av~-~~~  412 (412)
T d1ajsa_         393 TTKNLDYVATSIHEAVT-KIQ  412 (412)
T ss_dssp             CTTTHHHHHHHHHHHHH-HCC
T ss_pred             CHHHHHHHHHHHHHHHH-hcC
Confidence            77889999999999998 653

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=99.77  E-value=7.1e-18  Score=147.13  Aligned_cols=195  Identities=14%  Similarity=0.079  Sum_probs=135.6

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCccc
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIP  137 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~  137 (306)
                      +++++++++.++|++|.+.. ++   +|.+ +.++++++|+||+|.++............+....+.|+||.++ +|+ |
T Consensus       137 ~~~~~l~l~nP~NPtG~~~s-~~---~l~~-~~~~~~~ii~Dd~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-R  210 (334)
T d2f8ja1         137 GEGDVVFIPNPNNPTGHVFE-RE---EIER-ILKTGAFVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQ-R  210 (334)
T ss_dssp             CTTEEEEEESSCTTTCCCCC-HH---HHHH-HHTTTCEEEEECTTGGGTCCCCGGGGGTCSSEEEEEESTTTSSCTTT-C
T ss_pred             ccceEEEecccccccceeec-HH---Hhhc-cccceeEEeecccchhhcccccccccccCceEEEEecCccccchhhh-h
Confidence            46788888888999997765 44   4443 3568999999999976533333222222222233559999999 999 9


Q ss_pred             ceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeee
Q 021893          138 VSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD-EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGL  216 (306)
Q Consensus       138 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~  216 (306)
                      +||+++++++++.+....  ..+..+..++.++.+.++.... ++..+.+++.++.+.+.|++++     .. ..+..|.
T Consensus       211 ~G~~~~~~~~i~~l~~~~--~~~~~s~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-----~~-~~~~~g~  282 (334)
T d2f8ja1         211 VGYVVASEKFIDAYNRVR--LPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMG-----YR-ITDSRGN  282 (334)
T ss_dssp             EEEEEECHHHHHHHHHHS--CTTCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHT-----CE-ECCCCSS
T ss_pred             hhhcccchHHHHHHHHhh--cccccchhhhhhcccccccccchhhHHHHHHHHHHHHHHHHHHCC-----Ce-ECCCCce
Confidence            999999999998876532  2344567777766666654322 3345667777777777777763     21 2244566


Q ss_pred             EEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          217 FNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       217 ~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      ++|+.++.    .+..++++.|+++||.+++. .+++|++.   -+.+|++.++++|++
T Consensus       283 f~~~~~~~----~~~~~~~~~L~~~GI~vr~~-~~~vRis~---g~~ee~~~l~~~l~~  333 (334)
T d2f8ja1         283 FVFVFMEK----EEKERLLEHLRTKNVAVRSF-REGVRITI---GKREENDMILRELEV  333 (334)
T ss_dssp             EEEEECCH----HHHHHHHHHHHHTTEECEEE-TTEEEEEC---CCHHHHHHHHHHHHH
T ss_pred             EEEEECCC----CCHHHHHHHHHHCCCEECCC-CCeEEEEc---CCHHHHHHHHHHHhc
Confidence            77877663    57789999999999999875 78999994   367888888888875

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.76  E-value=2.9e-18  Score=148.64  Aligned_cols=228  Identities=14%  Similarity=0.110  Sum_probs=150.6

Q ss_pred             CHHHHHHHHHhc---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCC
Q 021893           46 DITALEKIFKES---GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRP  122 (306)
Q Consensus        46 d~~~le~~i~~~---~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~  122 (306)
                      |++.+++.+...   ..++..++++...++.|..+.+.+.+++|+++|++||+++++|++++++................
T Consensus       111 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~g~~~~~D~a~~~~~~~~~~~~~~~~~~~~  190 (343)
T d1m6sa_         111 DPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYA  190 (343)
T ss_dssp             CHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTC
T ss_pred             CHHHHHHhhhhhhcccccccccccccccccCCceecCHHHHHHHHHHHHhcCeEEEeccccccccccccccchhhhcccc
Confidence            788888888753   24577777777777766677889999999999999999999999998643222222111112234


Q ss_pred             cEEEeccccc-CCcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Q 021893          123 DMVILGKALG-GGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQ  201 (306)
Q Consensus       123 d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~  201 (306)
                      +..+++|..+ +|. ..+++....+.+...........+........++.............+...++...+.+.+..+.
T Consensus       191 ~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (343)
T d1m6sa_         191 DSVMFCLSKGLCAP-VGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEIG  269 (343)
T ss_dssp             SEEEEESSSTTCCS-SCEEEEECHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSSTTHHHHHHHHHHHHHHHHHHT
T ss_pred             cccccccccccccc-ccccccccHHHHhhhHhhCcccccccchhHHHHHhhhhhhhhhHHHHHHHHHHHHHhhhHHHHhc
Confidence            5556666555 454 67778887776654433211122222222222222222222223345556666677777777664


Q ss_pred             hhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          202 QQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       202 ~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      ...    ...+....++++.++..  ...+.+|++.|+++||++++.+++++|++++..+|++||++++++|+++++ ++
T Consensus       270 ~~~----~~~~~~~~~v~~~~~~~--~~~a~~l~~~L~~~Gi~v~~~~~~~iRi~~~~~~t~edid~~v~~l~~v~~-~~  342 (343)
T d1m6sa_         270 YSV----NPEDVKTNMVILRTDNL--KVNAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEKLFR-KF  342 (343)
T ss_dssp             CBC----CGGGCCSSEEEEECTTS--SSCHHHHHHHHHHHTEECEEEETTEEEEECCTTSCHHHHHHHHHHHHHHHH-HH
T ss_pred             cCc----cCCCCCceEEEEEeCCC--cccHHHHHHHHHHCCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH-Hh
Confidence            322    12223345667766542  356789999999999999998899999999999999999999999999998 65

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=3.1e-17  Score=145.69  Aligned_cols=222  Identities=17%  Similarity=0.196  Sum_probs=159.3

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |.+.+++.+.++  +++++.+.++++.+|.+.+    +++|.++|++||+++++|.+|+    .|. ...+......|++
T Consensus       132 ~~~~~~~~~~~~--~~~~v~~~~~~n~tG~i~p----i~~i~~~~~~~g~~~~vD~~qs----~g~-~~~d~~~~~~D~~  200 (388)
T d1h0ca_         132 TLQEVEEGLAQH--KPVLLFLTHGESSTGVLQP----LDGFGELCHRYKCLLLVDSVAS----LGG-TPLYMDRQGIDIL  200 (388)
T ss_dssp             CHHHHHHHHHHH--CCSEEEEESEETTTTEECC----CTTHHHHHHTTTCEEEEECTTT----TTT-SCCCTTTTTCSEE
T ss_pred             chHHHHHHhccC--CcceEEEeeeeeccccccC----HHHHHHHhhcccccceeccccc----ccc-cccccccccccee
Confidence            677777777763  6789999999999999999    9999999999999999999998    222 1233334456766


Q ss_pred             Eec--ccccCCcccceeeEeCHHHHhhcCCCC-----------------------ccCCCCCCHHHHHHHHHHHHHHhh-
Q 021893          126 ILG--KALGGGVIPVSAVLADKEVMLCIQPGE-----------------------HGSTFGGNPLASAVAIASLDVIRD-  179 (306)
Q Consensus       126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~aa~~al~~~~~-  179 (306)
                      ++|  |+++|.. .+|+++.+++.++.+....                       .....+.+...+.+..++++.+.+ 
T Consensus       201 ~~s~~K~~~gp~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~al~~~~~~  279 (388)
T d1h0ca_         201 YSGSQKALNAPP-GTSLISFSDKAKKKMYSRKTKPFSFYLDIKWLANFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQ  279 (388)
T ss_dssp             EEESSSTTCCCT-TCEEEEECHHHHHHHTTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccCCC-ceEEEeecHHHHHhhhhccccccccccccchhhhhhhhccccccccccccHHHHHHHHHHHHHHHHh
Confidence            554  9888665 7788888888776654321                       011123456677777788877765 


Q ss_pred             --ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC----CCC
Q 021893          180 --EKLAERSAHLGEELRQHLFKIQQQFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT----HDT  251 (306)
Q Consensus       180 --~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~~~  251 (306)
                        +....+..++.+++++.++......  ...... ....++.+.+++   +.+..++.+.|+++ ||.++.+    .++
T Consensus       280 g~~~~~~~~~~l~~~l~~~~~~~g~~~--~~~~~~~rs~~i~~~~~p~---~~~~~~~~~~L~~~~gI~v~~G~~~~~~~  354 (388)
T d1h0ca_         280 GLENSWRQHREAAAYLHGRLQALGLQL--FVKDPALRLPTVTTVAVPA---GYDWRDIVSYVIDHFDIEIMGGLGPSTGK  354 (388)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTCCB--SSCSGGGBCTTEEEEECCT---TCCHHHHHHHHHHHHCEECEECCGGGTTT
T ss_pred             ccccccccccchhHHHHHHHhhcCccc--ccCCHHHcCCeEEEEECCC---CCCHHHHHHHHHhcCCEEEeCCchhhcCC
Confidence              3356677777888888887775321  111111 233456676764   46788999999876 9988764    457


Q ss_pred             EEEEe-CCCCCCHHHHHHHHHHHHHHHhhhcCCCC
Q 021893          252 IVRLT-PPLSISSNELQEGSKALHDVLELDLPKMR  285 (306)
Q Consensus       252 ~lRi~-~~~~~t~~~i~~~~~~l~~~l~~~~~~~~  285 (306)
                      .||++ ++.+++.+||+.++++|+++++ ++.+++
T Consensus       355 ~iRis~~g~~~t~edid~li~aL~~~L~-~l~k~~  388 (388)
T d1h0ca_         355 VLRIGLLGCNATRENVDRVTEALRAALQ-HCPKKK  388 (388)
T ss_dssp             EEEEECCGGGCSHHHHHHHHHHHHHHHH-HSCCC-
T ss_pred             EEEEeCCCCCCCHHHHHHHHHHHHHHHH-HhcccC
Confidence            89999 5677899999999999999999 998753

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.74  E-value=3.6e-16  Score=137.22  Aligned_cols=207  Identities=14%  Similarity=0.168  Sum_probs=146.0

Q ss_pred             CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEec--ccccCCc
Q 021893           58 GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILG--KALGGGV  135 (306)
Q Consensus        58 ~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~s--K~~~~G~  135 (306)
                      .++++++.+.++++.+|.+.+    +++|.++|++||+++++|.+|+    .|.. .++......|++++|  |+++|..
T Consensus       125 ~~~~~~v~~~~~~~~tG~~~~----i~~i~~~~~~~g~~~~vDa~qs----~G~~-~~d~~~~~~D~~~~s~~K~l~gp~  195 (361)
T d1m32a_         125 DPTISHIAMVHSETTTGMLNP----IDEVGALAHRYGKTYIVDAMSS----FGGI-PMDIAALHIDYLISSANKCIQGVP  195 (361)
T ss_dssp             CTTCCEEEEESEETTTTEECC----HHHHHHHHHHHTCEEEEECTTT----TTTS-CCCTTTTTCSEEEEESSSTTCCCS
T ss_pred             ccCccceEEEeeecccccchh----hhhhhhhhcccceeeEeecccc----cCcc-cccccccccceEEeeecccccCCC
Confidence            378999999999999999999    9999999999999999999998    2221 234445567877665  9998776


Q ss_pred             ccceeeEeCHHHHhhcCCCCcc------------------CCCCCCHHHHHHHHHHHHHHhhccH----HHHHHHHHHHH
Q 021893          136 IPVSAVLADKEVMLCIQPGEHG------------------STFGGNPLASAVAIASLDVIRDEKL----AERSAHLGEEL  193 (306)
Q Consensus       136 ~~~g~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~aa~~al~~~~~~~~----~~~~~~~~~~l  193 (306)
                       ++|+++.+++.++...+....                  ...+.+.....+...+++....+..    ..+.+...+.+
T Consensus       196 -G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l  274 (361)
T d1m32a_         196 -GFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSL  274 (361)
T ss_dssp             -SEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             -CceEEEechhhhhhhccccccccccchhhhccccccccccCCCCCchhhhHHHHHHHHHHHhcchhhhHHHHHHHHHHH
Confidence             889999999988877654221                  1224566677777777766655433    34444555555


Q ss_pred             HHHHHHHHhhCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC---CCCEEEEeCCCCCCHHHHHHH
Q 021893          194 RQHLFKIQQQFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT---HDTIVRLTPPLSISSNELQEG  269 (306)
Q Consensus       194 ~~~L~~~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---~~~~lRi~~~~~~t~~~i~~~  269 (306)
                      ++.++..+...   ..... ....++.+.+++.. ..+..++.+.|.++|+.+.++   ..+.+|+++..+++++||+++
T Consensus       275 ~~~~~~~g~~~---~~~~~~rs~~v~~~~~p~~~-~~~~~~~~~~l~~~gi~i~~G~~~~~~~~Ris~~g~~~~~di~~l  350 (361)
T d1m32a_         275 VAGMRALGFNT---LLDDELHSPIITAFYSPEDP-QYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITAL  350 (361)
T ss_dssp             HHHHHHTTCCB---SSCGGGBCSSEEEEECCCCT-TCCHHHHHHHHHHTTEECEECCCSSSCEEEEECCSSCCHHHHHHH
T ss_pred             HHHHhhcCCcc---cCChhhcCCcEEEEECCCCC-CCCHHHHHHHHHHCCcEEECCCcCCCCEEEEeCCCCCCHHHHHHH
Confidence            55555543221   11111 12334566555422 345788999999999998764   467899997657899999999


Q ss_pred             HHHHHHHHh
Q 021893          270 SKALHDVLE  278 (306)
Q Consensus       270 ~~~l~~~l~  278 (306)
                      +++|+++|-
T Consensus       351 v~al~~~L~  359 (361)
T d1m32a_         351 LTAIRTAMY  359 (361)
T ss_dssp             HHHHHHHCT
T ss_pred             HHHHHHHcC
Confidence            999998874

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=9.2e-19  Score=156.43  Aligned_cols=217  Identities=13%  Similarity=0.101  Sum_probs=136.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccc--cc-ccCCC--
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRML--AS-DWEEV--  120 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~--~~-~~~~~--  120 (306)
                      |.+.+.+.+...+++++++++++++|+||. +.+++.+++|.++|++|++++|+||+|.++.+.+...  .. ...+.  
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~p~NPTG~-~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~  237 (397)
T d3tata_         159 RFNDLLATLKTLPARSIVLLHPCCHNPTGA-DLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGL  237 (397)
T ss_dssp             CHHHHHHHHTTCCSSCCCEECSSSCSSSCC-CCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTTTC
T ss_pred             chHHHHHHhhhcccccEEEEecCCCCCCCe-eCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCCcccchhhhhhhhcCC
Confidence            677777777766677889999999999995 5689999999999999999999999999875543211  11 11112  


Q ss_pred             -CCcEEEeccccc-CCcccceeeEeCHHHHhhcCC-------CCccCCCCCCHHHHHHHHHHHHHHh-hccHHHHHHHHH
Q 021893          121 -RPDMVILGKALG-GGVIPVSAVLADKEVMLCIQP-------GEHGSTFGGNPLASAVAIASLDVIR-DEKLAERSAHLG  190 (306)
Q Consensus       121 -~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~~al~~~~-~~~~~~~~~~~~  190 (306)
                       ...+.++||.++ +|+ |+||++++...++....       .......+.+...+.++...+..-. ..++.++++...
T Consensus       238 ~~i~~~s~SK~~~~~G~-RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~  316 (397)
T d3tata_         238 PALVSNSFSKIFSLYGE-RVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMR  316 (397)
T ss_dssp             CCEECBCCHHHHTBTTT-CCBCCEEECSSTTHHHHHHHHHHHHTTTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred             ceEEEecCcccccccCc-cccccccchhHHHHHHHHHHHHHHHhhcccccccHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence             223348999998 799 99999886654433221       1222333344455544444332211 122333333344


Q ss_pred             HHHHHHHHHHHhhC----C--CceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccCCCCEEEEeCCCCCCH
Q 021893          191 EELRQHLFKIQQQF----P--NYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPTHDTIVRLTPPLSISS  263 (306)
Q Consensus       191 ~~l~~~L~~~~~~~----~--~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~~~~~lRi~~~~~~t~  263 (306)
                      +.++.+.+.+...+    +  .+....+..|++.|+.++        .++++.|+++ ||++.|++    ||+++ ..++
T Consensus       317 ~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls--------~e~~~~L~~e~~V~l~~g~----Ri~~a-~~~~  383 (397)
T d3tata_         317 TRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLS--------AAQVDRLREEFGVYLIASG----RMCVA-GLNT  383 (397)
T ss_dssp             HHHHHHHHHHHHTTTTTCTTSCTTHHHHCCSSBCCCCCC--------HHHHHHHTTTTCEECCSSS----CCBTT-SCCT
T ss_pred             HHHHHHHHHHHHHHHHhCCCCceEEEcCCCceEEecCcC--------HHHHHHHHHhCCEEeCCCC----EEEec-cCCH
Confidence            44433333333222    1  122335567777776543        2457777655 99998863    88854 4578


Q ss_pred             HHHHHHHHHHHHHH
Q 021893          264 NELQEGSKALHDVL  277 (306)
Q Consensus       264 ~~i~~~~~~l~~~l  277 (306)
                      ++|+.+.++|++++
T Consensus       384 ~~i~~~~~ai~~v~  397 (397)
T d3tata_         384 ANVQRVAKAFAAVM  397 (397)
T ss_dssp             TTHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhC
Confidence            88999999988753

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=99.73  E-value=1.6e-18  Score=154.71  Aligned_cols=216  Identities=14%  Similarity=0.129  Sum_probs=139.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccc--cc----cCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLA--SD----WEE  119 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~--~~----~~~  119 (306)
                      +...+++...+..++++++++++++|+||. +.+++.+++|.++|++|++++|+||+|.++.+.+....  ..    ...
T Consensus       158 ~~~~~~~~~~~~~~~~~~i~~~~P~NPTG~-~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~  236 (396)
T d2q7wa1         158 DFDALINSLNEAQAGDVVLFHGCCHNPTGI-DPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHK  236 (396)
T ss_dssp             CHHHHHHHHTTCCTTCEEEEECSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCS
T ss_pred             ccchHHHHHHHhccCcEEEEecCCcCCcCe-ecCHHHHHHHHHHHhcCCeEEEEeccccccccCCccCchHhhhhhhhcc
Confidence            567777777766678899999999999995 56899999999999999999999999998755443211  11    112


Q ss_pred             CCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCC-------CccCCCCCCHHHHHHHHHHHHH------Hhh--ccHH
Q 021893          120 VRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPG-------EHGSTFGGNPLASAVAIASLDV------IRD--EKLA  183 (306)
Q Consensus       120 ~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~aa~~al~~------~~~--~~~~  183 (306)
                      ....+.++||.++ .|+ |+||+.+++..++.....       ......+.+..++.++...+..      +.+  +...
T Consensus       237 ~~~~~~s~sk~~~~~G~-R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~  315 (396)
T d2q7wa1         237 ELIVASSYSKNFGLYNE-RVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMR  315 (396)
T ss_dssp             CEEEEEECTTTTTCGGG-CCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-
T ss_pred             cccccccccccccccCC-CccccccchhHHHHHHHhhhhhhhhhhccccCCCHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence            2233458899998 899 999999976655443221       1112223444555444433321      111  2234


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccCCCCEEEEeCCCCCC
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTHDTIVRLTPPLSIS  262 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~~~lRi~~~~~~t  262 (306)
                      ++++++++.+.+.|++.+... .+....+..|++.|+.+.        .++++.|+ ++||++.|++    ||++. ..+
T Consensus       316 ~~~~~~r~~l~~~L~~~~~~~-~~~~~~~~~G~F~~~~l~--------~e~~~~L~~e~gV~~~~g~----Ri~~a-~l~  381 (396)
T d2q7wa1         316 QRIQRMRQLFVNTLQEKGANR-DFSFIIKQNGMFSFSGLT--------KEQVLRLREEFGVYAVASG----RVNVA-GMT  381 (396)
T ss_dssp             CHHHHHHHHHHHHHHHTTCCS-CCTHHHHCCSSEEECCCC--------HHHHHHHHHHHCEECCTTC----EEEGG-GCC
T ss_pred             HHHHHHHHHHHHHHHHhCCCC-CcceecCCCeEEEeeCCC--------HHHHHHHHHhCCEEECCCC----EEEec-CCC
Confidence            556666667777776654221 122234456777776443        24566665 5699998864    88853 356


Q ss_pred             HHHHHHHHHHHHHHH
Q 021893          263 SNELQEGSKALHDVL  277 (306)
Q Consensus       263 ~~~i~~~~~~l~~~l  277 (306)
                      +++|+.++++|.+++
T Consensus       382 ~~~i~~~~~ai~~v~  396 (396)
T d2q7wa1         382 PDNMAPLCEAIVAVL  396 (396)
T ss_dssp             TTTHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhC
Confidence            788999999998764

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.71  E-value=9.3e-17  Score=141.11  Aligned_cols=262  Identities=11%  Similarity=0.118  Sum_probs=151.8

Q ss_pred             eEEEEecCCCCcccchhcccCCccccccCCCCC-----------CCcccccCC-------CHHHHHHHHHhcC--CcEEE
Q 021893            4 IIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLL-----------PGHLKVDFG-------DITALEKIFKESG--DQIAG   63 (306)
Q Consensus         4 ~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~-------d~~~le~~i~~~~--~~~~~   63 (306)
                      .+++++|++.|...+..++..+.+..-...+.+           -.+.++|++       |++++++.++++.  .++++
T Consensus        64 ~~~~t~g~t~a~~~~~~al~~~gd~Vi~~~~~h~s~~~~~~~~g~~v~~v~~~~~~~~~i~~~~l~~~i~~~~k~~~~~l  143 (364)
T d2e7ja1          64 VARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVL  143 (364)
T ss_dssp             EEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEE
T ss_pred             EEEEECcHHHHHHHHHHHHhCCCcEEEeecccccccchHHHhccceEEEeeeccccccccCHHHHHhhhhhhcccCCceE
Confidence            466677777666665555554322211011111           113444443       6899999998753  45789


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--EecccccCCcccceee
Q 021893           64 FLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGGGVIPVSAV  141 (306)
Q Consensus        64 v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~~~~g~~  141 (306)
                      |+++.+++++|.+.+    +++|.++|++||+++++|++|+ ++..+  .....+  ..|++  |++|.++++. ++|++
T Consensus       144 v~i~~~~n~tG~~~~----l~~I~~ia~~~~i~livD~a~~-~g~~~--~~~~~~--g~D~~~~S~~K~~~~~g-~~g~l  213 (364)
T d2e7ja1         144 ALITYPDGNYGNLPD----VKKIAKVCSEYDVPLLVNGAYA-IGRMP--VSLKEI--GADFIVGSGHKSMAASG-PIGVM  213 (364)
T ss_dssp             EEEESSCTTTCCCCC----HHHHHHHHHTTTCCEEEECTTT-BTTBC--CCHHHH--TCSEEEEEHHHHSSCCS-SCEEE
T ss_pred             EEeecCCCCCceeec----chhheeccccccchhhccccch-hhhhh--hccccc--ccceeeeccccccCCCC-CEEEE
Confidence            999999999999988    9999999999999999999997 22211  122223  35655  5559999766 88999


Q ss_pred             EeCHHHHhhcCCCCccC--------CCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE
Q 021893          142 LADKEVMLCIQPGEHGS--------TFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELRQHLFKIQQQFPNYVKEV  211 (306)
Q Consensus       142 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~  211 (306)
                      +.++++++.+.......        ..........++.++++...+  +.+.+. .++.+++.+.|++++..   .....
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~l~~~g~~---~~~~~  289 (364)
T d2e7ja1         214 GMKEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRERIKRWDEE-VEKARRFAAEMEKLGIK---QLGDN  289 (364)
T ss_dssp             EECTTTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHHHGGGHHHH-HHHHHHHHHHHHHTTCE---EESSS
T ss_pred             EECHHHHHHHHhhccccCcccccccccccchhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCe---ecCCC
Confidence            99988776654321110        111222333444455554433  223333 34555666666665311   00011


Q ss_pred             EEeeeEEEEEEecCC-----ChhhHHHHHHHHHHCCceec-cCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          212 RGRGLFNAVEFDKTA-----LPVSAYDICLKMKERGILAK-PTHDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       212 ~~~g~~~~i~~~~~~-----~~~~~~~~~~~l~~~Gi~~~-~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      +.......+..+...     .......+...+.++|+... ++....+|++ .+..+++||++++++|+++++ ++
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~-~~~~t~edid~~~~~l~ei~~-~y  363 (364)
T d2e7ja1         290 PHNHDLMFFHAEVLYEISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLS-TYGLSDEEVDYVLNAFKEIIE-KY  363 (364)
T ss_dssp             SCCSSEEEEECHHHHHHHHHSSSGGGHHHHHHHHTTEECSCTTCCSEEEEE-CTTCCHHHHHHHHHHHHHHHH-HC
T ss_pred             CCCcceEEEeccchHHHHHHhhccchHHHHHHHhcCCceecCCCcceEEEe-ccCCCHHHHHHHHHHHHHHHH-Hh
Confidence            111112222222100     00011234556677777644 4445677777 356799999999999999998 65

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=1.3e-16  Score=141.90  Aligned_cols=216  Identities=17%  Similarity=0.236  Sum_probs=134.4

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |++.++++++   ++|++|+++.++|++|.+.+    +++|.++|++||+++++|.+|+    .|. ...+.....+|+.
T Consensus       132 d~~~~~~~i~---~~T~lv~is~~~n~tG~~~~----~~~I~~~~~~~~~~~ivD~~~~----~g~-~~~d~~~~~~D~~  199 (391)
T d1p3wa_         132 DLKELEAAMR---DDTILVSIMHVNNEIGVVQD----IAAIGEMCRARGIIYHVDATQS----VGK-LPIDLSQLKVDLM  199 (391)
T ss_dssp             CHHHHHHHCC---TTEEEEECCSBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTT----BTT-BCCCTTTSCCSEE
T ss_pred             cHHHHHHhCC---CCcEEEEEECCCCCCeeECC----HHHHHHHhccCCcEEEEeeccc----cCC-ccccchhcccccc
Confidence            6889998887   68999999999999999999    9999999999999999999997    221 1123333445655


Q ss_pred             --EecccccCCcccceeeEeCHHHHhhcCCCCccCC-------CCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 021893          126 --ILGKALGGGVIPVSAVLADKEVMLCIQPGEHGST-------FGGNPLASAVAIASLDVIRD--EKLAERSAHLGEELR  194 (306)
Q Consensus       126 --s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~l~  194 (306)
                        +..|.+ |+. .+|+++.+++.+....+...+..       ...+.....+...+++...+  ....++++++..++.
T Consensus       200 ~~s~~k~~-g~~-g~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~  277 (391)
T d1p3wa_         200 SFSGHKIY-GPK-GIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLW  277 (391)
T ss_dssp             EEESTTTT-SCS-SCEEEEECBTTBCCCCCSSCSSCTTTTTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccc-CCC-ceEEEEEecchhcccCCcccCCccccCcccCcchhhhhhhhhhhhhHHHHHhhHHHHHHHHHHHHHH
Confidence              455775 444 67888888887666655422211       12233333333333433322  123445555555555


Q ss_pred             HHHHHHHhhCCCceee--EEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----cC-----------------CCC
Q 021893          195 QHLFKIQQQFPNYVKE--VRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----PT-----------------HDT  251 (306)
Q Consensus       195 ~~L~~~~~~~~~~~~~--~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~-----------------~~~  251 (306)
                      +.|..+....   +..  .........+..+    ......+...|.+.+|..+    +.                 ..+
T Consensus       278 ~~L~~~~~~~---~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~i~v~~G~~c~~~~~~~~~~l~~~g~~~~~~~g  350 (391)
T d1p3wa_         278 NGIKDIEEVY---LNGDLEHGAPNILNVSFN----YVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHS  350 (391)
T ss_dssp             HTTTTSTTEE---ECSCTTTSCTTEEEEEET----TSCHHHHHHHTTTEECBCCCC------CCCHHHHHHTCCHHHHHT
T ss_pred             HHHHhhcCee---ecccccccCceEEEEEeC----CCChHHHHHHhCCCEEEccccccCCccchhHHHHHcCCCccccCC
Confidence            5555442110   000  0112223334343    2455666666643332211    10                 125


Q ss_pred             EEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          252 IVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       252 ~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      .||++++.++|++||+.+++.|+++++ .+++
T Consensus       351 ~iRiS~~~~nt~edid~l~~~l~~~l~-~lr~  381 (391)
T d1p3wa_         351 SIRFSLGRFTTEEEIDYTIELVRKSIG-RLRD  381 (391)
T ss_dssp             EEEEECCTTCCHHHHHHHHHHHHHHHH-HHHH
T ss_pred             EEEEecCCCCCHHHHHHHHHHHHHHHH-HHHH
Confidence            799999999999999999999999998 7654

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.69  E-value=5.6e-16  Score=138.14  Aligned_cols=213  Identities=18%  Similarity=0.182  Sum_probs=148.2

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccc-ccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGR-MLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~-~~~~~~~~~~~d~  124 (306)
                      +++.++++++   ++|++|.+.++++.+|.+.+    +++|.++|+++|+++++|.+|+    .|. .+..+.  ..+|+
T Consensus       153 ~~~~~~~~i~---~~T~lV~i~~v~~~tG~~~p----v~~i~~~~~~~~~~~~vD~~q~----~g~~~~~~~~--~~~d~  219 (404)
T d1qz9a_         153 SPEELPQAID---QDTAVVMLTHVNYKTGYMHD----MQALTALSHECGALAIWDLAHS----AGAVPVDLHQ--AGADY  219 (404)
T ss_dssp             SGGGHHHHCS---TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHHTCEEEEECTTT----TTTSCCCHHH--HTCSE
T ss_pred             cchhHHHhcC---CCceEEEEecccccccceec----HHHHhccccccccceeEEeecc----cccccccccc--ccceE
Confidence            6778888877   68999999999999999999    9999999999999999999997    121 122233  34555


Q ss_pred             EEe--cccccCCcccceeeEeCHHHHhhcCCCCc-----------------------cCCCCCCHHHHHHHHHHHHHHhh
Q 021893          125 VIL--GKALGGGVIPVSAVLADKEVMLCIQPGEH-----------------------GSTFGGNPLASAVAIASLDVIRD  179 (306)
Q Consensus       125 ~s~--sK~~~~G~~~~g~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~aa~~al~~~~~  179 (306)
                      .++  .|.+.+|...+|+++.++...+.+.+...                       ......+..+......+++.+..
T Consensus       220 ~~~s~~K~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (404)
T d1qz9a_         220 AIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQ  299 (404)
T ss_dssp             EEECSSSTTCCCTTCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTT
T ss_pred             EEEechhhcccCCceEEEEEechhhhhhCCccccccCCccccccccccccccccchhhhhhhccchhHHHHHHHHHHHHH
Confidence            544  48887554146678888776655442200                       01113355666666677776655


Q ss_pred             ---ccHHHHHHHHHHHHHHHHHHHHhhCCCcee----eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCE
Q 021893          180 ---EKLAERSAHLGEELRQHLFKIQQQFPNYVK----EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTI  252 (306)
Q Consensus       180 ---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~  252 (306)
                         +.+.++.+.+...+.+.++.+.... +...    .....+.++.+..+      ++.++.+.|.++||++..+.++.
T Consensus       300 ~~~~~i~~~~~~~~~~~~~l~~~~~~~~-~~~i~~p~~~~~r~~~vsf~~~------~~~~v~~~L~~~gi~~~~r~~~~  372 (404)
T d1qz9a_         300 TDMASLRRKSLALTDLFIELVEQRCAAH-ELTLVTPREHAKRGSHVSFEHP------EGYAVIQALIDRGVIGDYREPRI  372 (404)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHTTS-CCEECSCSSGGGBCSEEEEECT------THHHHHHHHHTTTEECEEETTTE
T ss_pred             hhHHHHHHHHHHhHHHHHHHHHhhccCC-CEEEECCCCccceeeEEEEecC------CHHHHHHHHHHCCCEEeecCCCe
Confidence               3355666666666666666654332 1211    11123455555443      46789999999999887666789


Q ss_pred             EEEeC-CCCCCHHHHHHHHHHHHHHHh
Q 021893          253 VRLTP-PLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       253 lRi~~-~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ||+++ ++++|++||+.+++.|+++++
T Consensus       373 lRiS~~h~ynt~~did~~~~~L~~vl~  399 (404)
T d1qz9a_         373 MRFGFTPLYTTFTEVWDAVQILGEILD  399 (404)
T ss_dssp             EEEECCTTTCCHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCHHHHHHHHHHHHHHHH
Confidence            99998 578999999999999999998

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.69  E-value=1.6e-16  Score=144.61  Aligned_cols=234  Identities=18%  Similarity=0.121  Sum_probs=144.2

Q ss_pred             CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc------ccccccccccccC
Q 021893           46 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG------LARSGRMLASDWE  118 (306)
Q Consensus        46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g------~~~~g~~~~~~~~  118 (306)
                      |++.||++|+++. +.++++++++.++.+|..+++.++|++|+++|++||++||+|++|..      .++.+..+..+..
T Consensus       167 d~~~l~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~~~~~~g~~l~~D~~~~~~~~~~~~~~~~~~~~~~~~  246 (465)
T d1ax4a_         167 DIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIK  246 (465)
T ss_dssp             CHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHH
T ss_pred             CHHHHHHHHHhhccccccceeeccccccCceecCCHHHHHHHHHHHHHcCCEEEEECcchhhhhcccccccccccccchh
Confidence            8999999999754 45788999999999888889999999999999999999999999962      1222222211111


Q ss_pred             C------CCCcEEEeccccc-CCcccceeeEeCHH--HHhhcCC----CCccCCCCC-CHHHHHHHHHHHHHHhhccHHH
Q 021893          119 E------VRPDMVILGKALG-GGVIPVSAVLADKE--VMLCIQP----GEHGSTFGG-NPLASAVAIASLDVIRDEKLAE  184 (306)
Q Consensus       119 ~------~~~d~~s~sK~~~-~G~~~~g~~~~~~~--~~~~~~~----~~~~~~~~~-~~~~~~aa~~al~~~~~~~~~~  184 (306)
                      +      -..|++++||..+ +++ +.|+++.+++  +.+....    .....++.. ...+..++...++....+++.+
T Consensus       247 ~i~~~~~~~~d~~s~s~~k~~~~~-~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~~  325 (465)
T d1ax4a_         247 EVIFDMYKYADALTMSAKKDPLLN-IGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYLH  325 (465)
T ss_dssp             HHHHHHGGGCSEEEEETTSTTCCS-SCEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred             hhccccccccceeEeecccCcccc-cceeEeecchHHHHHhhhccccccccCCCcchhhHHHHHHHhhhhHHhhhHHHHH
Confidence            1      1247888888777 454 6677777643  2222111    112222222 3333333333343333344666


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec----CC-ChhhHHH-HHHHHHHCCceecc-----------
Q 021893          185 RSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK----TA-LPVSAYD-ICLKMKERGILAKP-----------  247 (306)
Q Consensus       185 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~----~~-~~~~~~~-~~~~l~~~Gi~~~~-----------  247 (306)
                      +..++.+++++.|++....   .+..  ..+..+.+....    .. ....... ..+.+.+.||....           
T Consensus       326 ~~~~~~~~l~~~L~~~g~~---~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~GI~~~~~~~~~~~~~~~  400 (465)
T d1ax4a_         326 YRIGQVKYLGDRLREAGIP---IQYP--TGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPA  400 (465)
T ss_dssp             HHHHHHHHHHHHHHHTTCC---BCSS--CCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTT
T ss_pred             HHHHHHHHHHHHHHhhcCc---cccC--CCcceeeeehhhhcCCCccccchhHHHHHHHHHhcCceeccccccccccccc
Confidence            7777788898888886422   2222  222222222211    00 1112233 45555677876542           


Q ss_pred             ------CCCCEEEEeC-CCCCCHHHHHHHHHHHHHHHhhhcCCCCC
Q 021893          248 ------THDTIVRLTP-PLSISSNELQEGSKALHDVLELDLPKMRK  286 (306)
Q Consensus       248 ------~~~~~lRi~~-~~~~t~~~i~~~~~~l~~~l~~~~~~~~~  286 (306)
                            ...+.+|+++ ....|++|+|+++++|+++++ +..+.++
T Consensus       401 ~g~~~~~~~~~vRlalP~~~~T~eeiD~vv~~l~~v~~-~~~~i~g  445 (465)
T d1ax4a_         401 TGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKE-KFATLKG  445 (465)
T ss_dssp             TCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHH-HHTTCCC
T ss_pred             cCCccCCCCCceEEeCCCCCCCHHHHHHHHHHHHHHHH-HHHhccC
Confidence                  1245899985 456799999999999999988 7666544

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.69  E-value=4.8e-17  Score=144.89  Aligned_cols=215  Identities=13%  Similarity=0.057  Sum_probs=138.3

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccc------ccCC
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLAS------DWEE  119 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~------~~~~  119 (306)
                      +.+.+++......+++.++++++++|+||. +++++.+++|.++|++|++++|+||+|.++.+.+.....      ....
T Consensus       155 ~~~~~~~~~~~~~~~~~i~~~~~p~NPTG~-~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~  233 (394)
T d2ay1a_         155 DFEGMKADLAAAKKGDMVLLHGCCHNPTGA-NLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIP  233 (394)
T ss_dssp             CHHHHHHHHHTCCTTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCS
T ss_pred             cchhHHHHHhhcccCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHhhcceEEEEEeccchhhcccccccchhhhhhhhhcc
Confidence            467777777776677889999999999995 568999999999999999999999999987655432111      0111


Q ss_pred             CCCcEEEeccccc-CCcccceeeEeCHHHHhhcCCC-------CccCCCCCCHHHHHHHHHHHHH------Hhh--ccHH
Q 021893          120 VRPDMVILGKALG-GGVIPVSAVLADKEVMLCIQPG-------EHGSTFGGNPLASAVAIASLDV------IRD--EKLA  183 (306)
Q Consensus       120 ~~~d~~s~sK~~~-~G~~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~aa~~al~~------~~~--~~~~  183 (306)
                      ....+.++||.++ .|+ |+||+.+.....+.....       ......+.+...+..+...+..      +.+  +.+.
T Consensus       234 ~~~~~~s~sk~~~~~G~-R~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  312 (394)
T d2ay1a_         234 EVLIAASCSKNFGIYRE-RTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVR  312 (394)
T ss_dssp             SEEEEEECTTTTTCGGG-CEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccCCcc-cccchhhchhHHHHHHHhhhhhHhhhcccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence            1223448899998 899 999998876554433211       1111122233333332222211      111  2245


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHH-HCCceeccCCCCEEEEeCCCCCC
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMK-ERGILAKPTHDTIVRLTPPLSIS  262 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~-~~Gi~~~~~~~~~lRi~~~~~~t  262 (306)
                      ++++++++.+.+.|++.+... .+....+..|+++|+.+.        .+++++|+ ++||++.|+    .||+.. ..+
T Consensus       313 ~~~~~~r~~l~~~L~~~~~~~-~~~~~~~~~G~F~~~~ls--------~~~~~~L~~~~~V~~~~g----~Ri~~a-~l~  378 (394)
T d2ay1a_         313 SGMLRLREQLAGELRDLSGSD-RFGFVAEHRGMFSRLGAT--------PEQVKRIKEEFGIYMVGD----SRINIA-GLN  378 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSS-TTTHHHHCCSSEEECCCC--------HHHHHHHHHHHCEECCTT----CEEEGG-GCC
T ss_pred             HHHHHHHHHHHHHHHHhCCCC-ceeeECCCceeEEecCcC--------HHHHHHHHHhCCEEecCC----CEEEec-CCC
Confidence            666677777777777765332 122334567777776443        24567776 569999886    388853 457


Q ss_pred             HHHHHHHHHHHHHH
Q 021893          263 SNELQEGSKALHDV  276 (306)
Q Consensus       263 ~~~i~~~~~~l~~~  276 (306)
                      +++|+.+.++|.++
T Consensus       379 ~~~i~~l~~ai~~v  392 (394)
T d2ay1a_         379 DNTIPILARAIIEV  392 (394)
T ss_dssp             TTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            78898888888754

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.68  E-value=9.8e-16  Score=139.35  Aligned_cols=277  Identities=17%  Similarity=0.062  Sum_probs=165.1

Q ss_pred             ceEEEEecCCCCcccchhcccCCcccc--cc-CCCCCCCcccccCCCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccC
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCDNEAI--RG-FGPLLPGHLKVDFGDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIP   78 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~   78 (306)
                      .+++..++.||+.+.+....++.....  .. ....+.........|++.||+.+++++ +.++++++++.++..|..++
T Consensus       122 ~~~i~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~i~~e~~~~~~gg~~~  201 (467)
T d2v1pa1         122 SKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPV  201 (467)
T ss_dssp             TTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCC
T ss_pred             CcEEEEecccccccHHHHHHcCCeeeecccccccccccccccccCCCHHHHHHHHhhcCccccceeeecceeeccccccC
Confidence            456788999999888888777732111  00 011112223445569999999999754 45899999999999888888


Q ss_pred             ChhHHHHHHHHHHHcCCEEEEehhhh-ccc--ccccccccccC---------CCCCcEEEecccccCCcccceeeEeCHH
Q 021893           79 PDGYLKAVRDLCSKYNILMIADEIQS-GLA--RSGRMLASDWE---------EVRPDMVILGKALGGGVIPVSAVLADKE  146 (306)
Q Consensus        79 ~~~~l~~i~~l~~~~gi~li~De~~~-g~~--~~g~~~~~~~~---------~~~~d~~s~sK~~~~G~~~~g~~~~~~~  146 (306)
                      +.++|++|+++|++||++|++|+++. +..  ..+....+...         .-..|++|+|+..+++....|+++.+++
T Consensus       202 ~~~~l~~i~~ia~~~g~~l~~D~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~K~~~~~~gg~i~~~~~  281 (467)
T d2v1pa1         202 SLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDD  281 (467)
T ss_dssp             CHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSCEEEEECSG
T ss_pred             CHHHHHHHHHHHHHcCCEEEEechhhhccccccccccccccCCcccccchhhcccCCEEEecCCCCCCCCCceeEEecch
Confidence            99999999999999999999999996 211  11111111111         1245788777544422203445666543


Q ss_pred             -HHhhcC-------CCCccCCCCCCHH-HHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeE
Q 021893          147 -VMLCIQ-------PGEHGSTFGGNPL-ASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLF  217 (306)
Q Consensus       147 -~~~~~~-------~~~~~~~~~~~~~-~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~  217 (306)
                       +.....       ......++.+... .+.++...+.....+++.++..++.++++++|.+...    .+  .+..+..
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~v--~~~~~~~  355 (467)
T d2v1pa1         282 SFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGV----VC--QQAGGHA  355 (467)
T ss_dssp             GGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTTC----CE--EEECSSC
T ss_pred             hhhhHHHhhcccccccccCcchhhhHHHHHHHHHHHhHHhhhHHHHHHHHHHHHHHHHHHHhcCC----cc--cCCCccc
Confidence             222211       1122333333333 3334444444444456777888889999999988631    12  1222222


Q ss_pred             EEEEEe----cCC-ChhhHHHH-HHHHHHCCceec-----------------cCCCCEEEEeCC-CCCCHHHHHHHHHHH
Q 021893          218 NAVEFD----KTA-LPVSAYDI-CLKMKERGILAK-----------------PTHDTIVRLTPP-LSISSNELQEGSKAL  273 (306)
Q Consensus       218 ~~i~~~----~~~-~~~~~~~~-~~~l~~~Gi~~~-----------------~~~~~~lRi~~~-~~~t~~~i~~~~~~l  273 (306)
                      ..++..    ... .......+ .+.+.+.||...                 +.....+|++++ ...|+++||+++++|
T Consensus       356 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gi~~~~~g~~~~~~~~~~~~~~~~~~~~vRlaip~~~~T~eeiD~vv~~l  435 (467)
T d2v1pa1         356 AFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAF  435 (467)
T ss_dssp             EEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTCCHHHHHHHHHHH
T ss_pred             eeecchhhcCCcchhhhhhHHHHHHHHHHcCCeeecccccccccccccCCccCCCcceEEEecCCCCCCHHHHHHHHHHH
Confidence            222211    100 01122333 444456676432                 223568999865 466999999999999


Q ss_pred             HHHHhhhcCCCCC
Q 021893          274 HDVLELDLPKMRK  286 (306)
Q Consensus       274 ~~~l~~~~~~~~~  286 (306)
                      +++++ ...+.++
T Consensus       436 ~~v~~-~~~~i~~  447 (467)
T d2v1pa1         436 KHVKE-NAANIKG  447 (467)
T ss_dssp             HHHHH-TGGGCCC
T ss_pred             HHHHH-HHHhccC
Confidence            99998 6655544

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.68  E-value=6.9e-16  Score=139.06  Aligned_cols=219  Identities=12%  Similarity=0.099  Sum_probs=144.1

Q ss_pred             CCHHHHHHHHHhc--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc-ccccccccccCCCC
Q 021893           45 GDITALEKIFKES--GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA-RSGRMLASDWEEVR  121 (306)
Q Consensus        45 ~d~~~le~~i~~~--~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~-~~g~~~~~~~~~~~  121 (306)
                      -|+++|+++|+++  ..++.+|+++.+++.+|...+    +++|.++|++||+++++|++|+++. ..+... .......
T Consensus       194 ~d~~~l~~~i~~~~~~~~~~~v~~~~~~~~~g~~~~----l~~i~~~~~~~~~~l~vD~a~g~~~~~~~~~~-~~~~~~~  268 (434)
T d2z67a1         194 VPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD----IVEIAKICENYDIPHIINGAYAIQNNYYLEKL-KKAFKYR  268 (434)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC----HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHH-HHHHTSC
T ss_pred             CCHHHHHHHHHhhhhcCCceEEEeccCcCCCccccC----HHHHHHHHHHhCCeEEEeccchhhhhhccccc-cccccCC
Confidence            4899999999874  246788888888888898877    9999999999999999999997431 111111 1122345


Q ss_pred             CcEEEec--ccccCCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Q 021893          122 PDMVILG--KALGGGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLF  198 (306)
Q Consensus       122 ~d~~s~s--K~~~~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~  198 (306)
                      .|+++++  |.++++. +.|++.. ++.+++.+.......+...+...+.++...+......+..++..++.++++++|+
T Consensus       269 ~D~~~~s~hK~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~g~~~~~~~~~~~a~~l~~~L~  347 (434)
T d2z67a1         269 VDAVVSSSDKNLLTPI-GGGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLN  347 (434)
T ss_dssp             CSEEEEEHHHHHCCCS-SCEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceEEEcCccccccCC-CccccccCcHHHHHHHHhhcccccccchHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHH
Confidence            6777555  9998776 6676665 4667777665433333322223333333222222224466777788899999999


Q ss_pred             HHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc---------------CCCCEEEEeCCCCCCH
Q 021893          199 KIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP---------------THDTIVRLTPPLSISS  263 (306)
Q Consensus       199 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~---------------~~~~~lRi~~~~~~t~  263 (306)
                      ++.......+...+ ......+.+     ..+..++...|.++||....               ...+++|++++..+|+
T Consensus       348 ~l~~~~g~~ll~~~-~~~~~~~~~-----~~~~~~l~~~L~~~gI~g~~v~~~l~~~g~~~~~~~~~~~l~~~~s~~~T~  421 (434)
T d2z67a1         348 DLSKKTGGKFLDVE-SPIASCISV-----NSDPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRT  421 (434)
T ss_dssp             HHHHHSSCCBCCCC-CSSEEEEEC-----SSCHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCH
T ss_pred             HhhhhcCceecCCC-CCceeeeec-----CCCHHHHHHHHHHcCCeeeehhhhccccCeeeecccCCCeEEEecCCCCCH
Confidence            88655321222221 122222222     24567888999999985431               1347899999999999


Q ss_pred             HHHHHHHHHHHH
Q 021893          264 NELQEGSKALHD  275 (306)
Q Consensus       264 ~~i~~~~~~l~~  275 (306)
                      +|||.++++|++
T Consensus       422 edID~~i~~L~k  433 (434)
T d2z67a1         422 EDIVNSVSKLEK  433 (434)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhc
Confidence            999999999976

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.67  E-value=1.3e-16  Score=142.78  Aligned_cols=252  Identities=13%  Similarity=0.072  Sum_probs=153.6

Q ss_pred             ceEEEEecCCCCcccchhcccCC--------ccccccCCCCCCCc---------ccccC-CCHHHHHHHHHhcCCcEEEE
Q 021893            3 AIIVSCCGCFHGRTLAAISMSCD--------NEAIRGFGPLLPGH---------LKVDF-GDITALEKIFKESGDQIAGF   64 (306)
Q Consensus         3 ~~ii~~~~~~hg~~~~~~~~~~~--------~~~~~~~~~~~~~~---------~~~~~-~d~~~le~~i~~~~~~~~~v   64 (306)
                      .+||+-+|+-..-..+..+++.+        ....-...|.|+..         ....+ .|.+.+++.++   ++++++
T Consensus       124 ~~IvvG~Gsteli~~~~~AL~~~~~~~~~~pg~~Vv~~~P~y~~Y~~~~~~~~~~~~~~~~D~~~~~~~~~---~~~~ii  200 (425)
T d2hoxa1         124 RYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYVWAGNAANYVNVSN---PEQYIE  200 (425)
T ss_dssp             CEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEEEEEEGGGGTTCSC---GGGEEE
T ss_pred             CEEEECCCHHHHHHHHHHHhccccccccCCCCCEEEEecCccccHHHHHHHcCCCCCccCCCHHHHHhhCC---CCceEE
Confidence            46888888887666666666532        12122223444321         00000 15666655554   578899


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEeccccc-CCcccceeeEe
Q 021893           65 LFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALG-GGVIPVSAVLA  143 (306)
Q Consensus        65 ~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~-~G~~~~g~~~~  143 (306)
                      +++.+|||+|.+..           +..+++.+|.||+|.+..+.  .+ ........-+.|+||.++ +|+ |+||+++
T Consensus       201 ~l~sPnNPtG~l~~-----------~v~~~~~~I~DEaY~~~~f~--~~-~~~~~~~Ivl~S~SK~fglaGl-RiGw~i~  265 (425)
T d2hoxa1         201 MVTSPNNPEGLLRH-----------AVIKGCKSIYDMVYYWPHYT--PI-KYKADEDILLFTMSKFTGHSGS-RFGWALI  265 (425)
T ss_dssp             EEESSCTTTCCCCC-----------CSSTTCEEEEECTTCSTTTS--CC-CSCBCCSEEEEEHHHHTSCGGG-CCEEEEE
T ss_pred             EEECCCCCCcchhh-----------hhhhCCEEEEeccccCcccc--ch-hhhcCCeEEEEeCHHhccCcch-heeeEEe
Confidence            99999999997532           23468999999999642111  11 111222334559999999 999 9999766


Q ss_pred             C-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---------ccH----HHHHHHHHHHHHHHHHHHHh----hCC
Q 021893          144 D-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---------EKL----AERSAHLGEELRQHLFKIQQ----QFP  205 (306)
Q Consensus       144 ~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---------~~~----~~~~~~~~~~l~~~L~~~~~----~~~  205 (306)
                      + +.+++.+.......+++.+.+++.++.++++....         .++    .+.++++.+.+++.|++...    .+|
T Consensus       266 ~~~~i~~~~~~~~~~~~~~vs~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~~~~~l~~~p  345 (425)
T d2hoxa1         266 KDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELP  345 (425)
T ss_dssp             CCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCC
T ss_pred             CCHHHHHHHHHhhccCcccCCHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeccC
Confidence            4 66777776554555667788888888888875421         122    23333334444444433221    000


Q ss_pred             C------ceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-----CCCEEEEeCCCCCCHHHHHHHHHHHH
Q 021893          206 N------YVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-----HDTIVRLTPPLSISSNELQEGSKALH  274 (306)
Q Consensus       206 ~------~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-----~~~~lRi~~~~~~t~~~i~~~~~~l~  274 (306)
                      .      ........+.+.|+.+..    .......+.|.++||.+.|+     +++++|++  +..+++++++++++|+
T Consensus       346 ~~~~~~f~~~~~~~~~~f~wl~~~~----~~~~~~~~lL~e~gI~v~pGs~FG~~~~yvRis--l~~~~e~ld~~l~rL~  419 (425)
T d2hoxa1         346 QSEYCNYFRRMRPPSPSYAWVKCEW----EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLS--LIKTQDDFDQLMYYLK  419 (425)
T ss_dssp             SCEEETTTTEEECCCCSEEEEEECS----GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEE--CSSCHHHHHHHHHHHH
T ss_pred             CccceeeeeeccCCCcceeeeeCCC----ChHHHHHHHHHhCCEEEEechhcCCCCCEEEEE--ecCCHHHHHHHHHHHH
Confidence            0      011233455566766543    22233556678899999974     46899999  6788999999999999


Q ss_pred             HHHh
Q 021893          275 DVLE  278 (306)
Q Consensus       275 ~~l~  278 (306)
                      ++++
T Consensus       420 ~~v~  423 (425)
T d2hoxa1         420 DMVK  423 (425)
T ss_dssp             HHHT
T ss_pred             HHHh
Confidence            9987

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.65  E-value=8.9e-16  Score=138.69  Aligned_cols=228  Identities=13%  Similarity=0.085  Sum_probs=149.5

Q ss_pred             CHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccc-ccccc--cccccCCCC
Q 021893           46 DITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLA-RSGRM--LASDWEEVR  121 (306)
Q Consensus        46 d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~-~~g~~--~~~~~~~~~  121 (306)
                      |+++||++|++.. +++.+|+++.+++++|.+.+    +++|.++|++||++|++|++|++.. .....  +....  -.
T Consensus       179 d~~~l~~~i~~~~~~~~~~v~~~~~~~~~G~~~~----~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~--~~  252 (445)
T d3bc8a1         179 DLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR----LEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARV--GR  252 (445)
T ss_dssp             CHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC----HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHH--SC
T ss_pred             CHHHHHHHHHhccccCeEEEEEeCCCCCCeeehh----HHHHHHHHHHhCCcEEEEccchhhhhhccccchhccCc--CC
Confidence            8999999998753 46899999999999998888    9999999999999999999998421 11111  11111  13


Q ss_pred             CcEEEec--ccccCCcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHH
Q 021893          122 PDMVILG--KALGGGVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQ  195 (306)
Q Consensus       122 ~d~~s~s--K~~~~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~  195 (306)
                      .|++++|  |.++++. ..|+++.+ +...+.+.......   .+......+..++..+..   ....+....+.+++++
T Consensus       253 vd~~~~s~hK~~~~p~-g~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  328 (445)
T d3bc8a1         253 IDAFVQSLDKNFMVPV-GGAIIAGFNEPFIQDISKMYPGR---ASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLST  328 (445)
T ss_dssp             CCEEEEEHHHHHSCCS-SCEEEEESCHHHHHHHHHHSCSC---BCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceEEecCccccccCC-CCceeeeCChHHHHHHHHHHhhc---ccCcchHHHHHHHHHHhhhcchhhHHHHHHHHHHHHH
Confidence            5666555  9888776 77777765 55555543211111   122222233333433333   3345666777888888


Q ss_pred             HHHHHHhhCCCceeeEEEeeeEEEEEEecCC--ChhhHHHHHHHHHHCCceecc----C--------------------C
Q 021893          196 HLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA--LPVSAYDICLKMKERGILAKP----T--------------------H  249 (306)
Q Consensus       196 ~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~~~~~~~~l~~~Gi~~~~----~--------------------~  249 (306)
                      .|.++.......+...+.......+.+....  ...+..++...|.+.||....    .                    .
T Consensus       329 ~L~~l~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~  408 (445)
T d3bc8a1         329 QLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYP  408 (445)
T ss_dssp             HHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCS
T ss_pred             HHHHHHhhcCceeecCCCCCcceEEEeeeccccCCCCHHHHHHHHHHcCCCcceeeccccccchhhhhhhhcCCCCccCC
Confidence            9988775543333344444444444443221  234566788889998874321    0                    1


Q ss_pred             CCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCCC
Q 021893          250 DTIVRLTPPLSISSNELQEGSKALHDVLELDLPKM  284 (306)
Q Consensus       250 ~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~~  284 (306)
                      ...+|++++..+|++|||.++++|+++++ ++++.
T Consensus       409 ~~~i~i~~~~~~T~eDID~~v~~L~kilk-~~rk~  442 (445)
T d3bc8a1         409 CAYLNAAAAIGMKMQDVDLFIKRLDKCLN-IVRKE  442 (445)
T ss_dssp             SCEEEEECCTTCCHHHHHHHHHHHHHHHH-HHHHH
T ss_pred             CCeEEEeCcCCCCHHHHHHHHHHHHHHHH-HHHhh
Confidence            35699999999999999999999999999 87653

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.64  E-value=2.4e-14  Score=125.03  Aligned_cols=208  Identities=17%  Similarity=0.095  Sum_probs=143.5

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcC--CEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcc
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN--ILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVI  136 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~g--i~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~  136 (306)
                      .+++.+++.+..+++|.+.+    +++|.++|++++  .++++|.+++ +  ....+..+.++++.-+.+..|+++|-. 
T Consensus       119 ~~~~~v~~~h~eTstG~~~~----i~~i~~~~~~~~~~~l~~vDavss-~--g~~~i~~d~~~iD~~~~~sqK~l~gpp-  190 (348)
T d1iuga_         119 EGYAGLLLVHSETSTGALAD----LPALARAFKEKNPEGLVGADMVTS-L--LVGEVALEAMGVDAAASGSQKGLMCPP-  190 (348)
T ss_dssp             SSCSEEEEESEETTTTEECC----HHHHHHHHHHHCTTCEEEEECTTT-B--TTBCCCSGGGTCSEEEEESSSTTCCCS-
T ss_pred             cCCCeeEEEecchhhhhhcc----HHHHHHHHHhhhccceeechhhhc-c--cccccccccccCCEEEeccccceecCC-
Confidence            46778899999999999999    999999999885  7899999987 2  112344555554333335559997666 


Q ss_pred             cceeeEeCHHHHhhcCCCC--------------ccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh
Q 021893          137 PVSAVLADKEVMLCIQPGE--------------HGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ  202 (306)
Q Consensus       137 ~~g~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~  202 (306)
                      ++|+++.+++.++++++..              ....++++...+.+..++++.+.++ ..++. +..+..+..+.....
T Consensus       191 G~~~v~~s~~~le~~~~~~~~~dl~~~~~~~~~~~~~~Tp~v~~i~~l~~aL~~~~~~-~~~~~-~~~~~~~~~~~~~~~  268 (348)
T d1iuga_         191 GLGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPR-LEEHL-ALKAWQNALLYGVGE  268 (348)
T ss_dssp             CEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHH-HHHHHHHHHHHHHHH
T ss_pred             ceeeeeechHHHhhhcccccccchhhhhhhhccCcccccccchHHHHHHHHHHHHHHH-HhHHH-HHHHHHHHHHhhhhh
Confidence            7789999999988876531              1223455666777777888887654 22332 233333334444333


Q ss_pred             hCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          203 QFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----DTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       203 ~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      .. +...... .+..+..+.+|+   +.+..++.+.|.++|+.+.++.    +..+||+.....+.+|++.++++|++++
T Consensus       269 ~~-gl~~~~~~~s~~v~~~~~P~---g~~~~~~~~~l~~~gi~i~~G~~~l~~~~~RIg~mG~~~~~d~~~~~~~l~~~l  344 (348)
T d1iuga_         269 EG-GLRPVPKRFSPAVAAFYLPE---GVPYARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVL  344 (348)
T ss_dssp             HT-TCEESCSSBCTTCEEEECCT---TCCHHHHHHHHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHH
T ss_pred             hh-hhccChhhcCCeEEEEECCC---CCCHHHHHHHHHHCCeEEEcCccccCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence            22 1211111 133456777765   5678899999999999988763    4689999888899999999999999999


Q ss_pred             hhhc
Q 021893          278 ELDL  281 (306)
Q Consensus       278 ~~~~  281 (306)
                      + ++
T Consensus       345 ~-~~  347 (348)
T d1iuga_         345 E-EI  347 (348)
T ss_dssp             H-HH
T ss_pred             H-Hh
Confidence            8 64

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.61  E-value=6.6e-15  Score=129.73  Aligned_cols=216  Identities=16%  Similarity=0.151  Sum_probs=142.7

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      +.+..+.....  ++++++.+...++.+|.+.+    +++|.++|+++|+++++|.+++    .|. ..++...+..|++
T Consensus       131 ~~~~~~~~~~~--~~~~~v~~~~~~~~tg~~~~----i~~i~~~~~~~g~~~~vDa~~~----~g~-~~~~~~~~~~d~~  199 (377)
T d1vjoa_         131 SLEELRTALET--HRPAILALVHAETSTGARQP----LEGVGELCREFGTLLLVDTVTS----LGG-VPIFLDAWGVDLA  199 (377)
T ss_dssp             CHHHHHHHHHH--HCCSEEEEESEETTTTEECC----CTTHHHHHHHHTCEEEEECTTT----TTT-SCCCTTTTTCSEE
T ss_pred             cchhhhhhhhc--Ccceeeeeeeeeccceeeec----hhhhhhhhhhccceEEEecchh----hhh-hhhccccccccee
Confidence            34444444443  46788888999999999999    9999999999999999999997    222 1133334556766


Q ss_pred             Eec--ccccCCcccceeeEeCHHHHhhcCCCCcc--------------------CCCCCCHHHHHHHHHHHHHHhh---c
Q 021893          126 ILG--KALGGGVIPVSAVLADKEVMLCIQPGEHG--------------------STFGGNPLASAVAIASLDVIRD---E  180 (306)
Q Consensus       126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~aa~~al~~~~~---~  180 (306)
                      ++|  |+++|+. .+|++..+++.++...+....                    .....+.....++..+.+....   +
T Consensus       200 ~~s~~K~~~gp~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~  278 (377)
T d1vjoa_         200 YSCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLA  278 (377)
T ss_dssp             ECCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHH
T ss_pred             eecccccccCCC-EEEEecchhhHHhhhhccCCCCcceeeccchhhhccCcccccccccceechhhhHHHHhhhhhcCch
Confidence            554  7888776 788888998887765432111                    1112333444445555555544   3


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC----CCCEEEE
Q 021893          181 KLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT----HDTIVRL  255 (306)
Q Consensus       181 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~~~~lRi  255 (306)
                      ...++.+++.+.+++.+.......  ..........++.+.+++   +.+..++++.|.++ ||.+..+    .++.||+
T Consensus       279 ~~~~~~~~~~~~l~~~l~~~~~~~--~~~~~~rs~~v~~~~~p~---~~~~~~l~~~L~~~~gI~v~~G~~~~~~~~~Ri  353 (377)
T d1vjoa_         279 NCWQRHQKNVEYLWERLEDIGLSL--HVEKEYRLPTLTTVCIPD---GVDGKAVARRLLNEHNIEVGGGLGELAGKVWRV  353 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCB--SSCGGGBCSSEEEEECCT---TCCHHHHHHHHHHHHCEECEECCGGGTTTEEEE
T ss_pred             HHHHHHHHHhhhhhhhhhccCcee--ecChHhcCCeEEEEECCC---CCCHHHHHHHHHhcCCEEEecCcccccCCEEEE
Confidence            345666666777777776654221  111111233445666654   46788999988755 9988754    3578999


Q ss_pred             eC-CCCCCHHHHHHHHHHHHHHHh
Q 021893          256 TP-PLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       256 ~~-~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      ++ +..++.+||++++++|+++++
T Consensus       354 s~~g~~~t~edi~~lv~al~~~l~  377 (377)
T d1vjoa_         354 GLMGFNSRKESVDQLIPALEQVLR  377 (377)
T ss_dssp             ECCGGGCSHHHHHHHHHHHHHHHC
T ss_pred             ecCcCCCCHHHHHHHHHHHHHHhC
Confidence            95 566789999999999999874

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.60  E-value=6e-15  Score=130.45  Aligned_cols=219  Identities=13%  Similarity=0.121  Sum_probs=147.4

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcC--CEEEEehhhhcccccccccccccCCCCCc
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYN--ILMIADEIQSGLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~g--i~li~De~~~g~~~~g~~~~~~~~~~~~d  123 (306)
                      +.+.+++.+.+  .+++++++.++++.+|...+    ++++.++|++++  +++++|.+++    .|. ..++.....+|
T Consensus       123 ~~~~~~~~~~~--~~~~~v~~~~~~~~tg~~~~----~~~~~~~~~~~~~~~~~~vDa~qs----~g~-~pid~~~~giD  191 (382)
T d2bkwa1         123 PLELITEKLSQ--NSYGAVTVTHVDTSTAVLSD----LKAISQAIKQTSPETFFVVDAVCS----IGC-EEFEFDEWGVD  191 (382)
T ss_dssp             CHHHHHHHHHH--SCCSEEEEESEETTTTEECC----HHHHHHHHHHHCTTSEEEEECTTT----TTT-SCCCTTTTTCS
T ss_pred             chhHHHHHhhh--ccchheeeeecccccccccc----chhhhhhccccccceeeeeecccc----ccc-ccccccccCee
Confidence            57888888876  46889999999999999999    999999988775  9999999998    222 12333344567


Q ss_pred             EEEec--ccccCCcccceeeEeCHHHHhhcCCCC--------------------------ccCCCCCCHHHHHHHHHHHH
Q 021893          124 MVILG--KALGGGVIPVSAVLADKEVMLCIQPGE--------------------------HGSTFGGNPLASAVAIASLD  175 (306)
Q Consensus       124 ~~s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~aa~~al~  175 (306)
                      ++++|  |+++|.. ++|+++.++++++.+.+..                          ....++++...+.+..++++
T Consensus       192 ~~~~s~~K~l~gP~-G~g~l~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~aL~  270 (382)
T d2bkwa1         192 FALTASQKAIGAPA-GLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALK  270 (382)
T ss_dssp             EEEEESSSTTCCCS-CEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHH
T ss_pred             EEeecccccCcCCC-chhhhhccHHHHhhhhhcccCCCcccchhhhhhhhhhhhcccccccccccCCcHHHHHHHHHHHH
Confidence            66555  9998777 8899999999877654320                          11223566678888889999


Q ss_pred             HHhhccH---HHHHHHHHHHHHHHHHHHHhhCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC---
Q 021893          176 VIRDEKL---AERSAHLGEELRQHLFKIQQQFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT---  248 (306)
Q Consensus       176 ~~~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---  248 (306)
                      ++.+++.   .++.+++.+++++.+........-...... ....++.+..+      +..++.+.|.++||.++.+   
T Consensus       271 ~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~s~~v~~~~~~------~~~~~~~~L~~~gi~i~~G~~~  344 (382)
T d2bkwa1         271 EILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTAVYVA------DPPDVIAFLKSHGVVIAGGIHK  344 (382)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEEEECS------CHHHHHHHHHHTTEECBCCCCT
T ss_pred             HHHHhhhhhhHHHHHHHHHHHHHHhhhcccccccccCchhccCCcEEEEcCC------CHHHHHHHHHHCCeEEECCCCh
Confidence            9877543   445556666666666543211000000001 12233444444      3567888999999999875   


Q ss_pred             --CCCEEEEeC-CCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          249 --HDTIVRLTP-PLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       249 --~~~~lRi~~-~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                        ..+.+|++. +...++++++.+++.|+.+.. .+++
T Consensus       345 ~~~~~~~Ri~~~G~~~~~e~i~~l~~~l~~i~~-~L~~  381 (382)
T d2bkwa1         345 DIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKL-ALQR  381 (382)
T ss_dssp             TTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHH-HTTC
T ss_pred             hhcCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-HHCc
Confidence              247899993 455667788888888876665 5554

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.59  E-value=2.2e-14  Score=123.56  Aligned_cols=221  Identities=11%  Similarity=0.021  Sum_probs=128.0

Q ss_pred             CCHHHHHHHHHhcC---CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCC--
Q 021893           45 GDITALEKIFKESG---DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEE--  119 (306)
Q Consensus        45 ~d~~~le~~i~~~~---~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~--  119 (306)
                      .+++.+++.+.+..   ..+..++++....+.+....+.+.++++.++|++||+++++|++|++....+.........  
T Consensus       116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~  195 (345)
T d1v72a1         116 LDIVRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWK  195 (345)
T ss_dssp             CCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGG
T ss_pred             ccHHHhhhhhcccccccccccceeeeeeccccccccccchhhhhHHHHHHhcCceeeecccccceeccccccCHHHhhcc
Confidence            47899999888532   2345555555554444456678889999999999999999999998643343333222222  


Q ss_pred             CCCcEEEecccccCCcccceeeEe-CHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Q 021893          120 VRPDMVILGKALGGGVIPVSAVLA-DKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLF  198 (306)
Q Consensus       120 ~~~d~~s~sK~~~~G~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~  198 (306)
                      ...+..+++|..+++. ..+.... ...................+ ....++.++....... ...........+...+.
T Consensus       196 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~aa~~~~~~~~~~-~~~~~~~~~~~~~~~~~  272 (345)
T d1v72a1         196 AGVDALSFGATKNGVL-AAEAIVLFNTSLATEMSYRRKRAGHLSS-KMRFLSAQIDAYLTDD-LWLRNARKANAAAQRLA  272 (345)
T ss_dssp             GTCCEEEECCGGGTCS-SCEEEEESSGGGHHHHHHHHHHTTCCCS-STHHHHHHHHHHTSTT-HHHHHHHHHHHHHHHHH
T ss_pred             ccccccccCccccccc-cccccccchhhhhhhccccccccccccc-hhhHHhhhhHHHHHHh-hhhhhccchhhHHHHHH
Confidence            2345667777766554 4443433 33322221111111111111 1222222233332222 22223333333334444


Q ss_pred             HHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceecc--CCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          199 KIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKP--THDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       199 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~--~~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      ......++.....+..++++++.++        .++++.|+++|+.+.+  .+.+.+||+++..+|++|||.+++.|+++
T Consensus       273 ~~l~~~~g~~~~~p~~~niv~~~~~--------~~~~~~L~~~gi~v~~~~~~~~~lR~~~~~~~T~edid~~le~lr~a  344 (345)
T d1v72a1         273 QGLEGLGGVEVLGGTEANILFCRLD--------SAMIDALLKAGFGFYHDRWGPNVVRFVTSFATTAEDVDHLLNQVRLA  344 (345)
T ss_dssp             HHHTTCTTEEEESCCCSSEEEEEEC--------HHHHHHHHHTTCBCBCSSSSTTEEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred             HHHHhcCCcEeccCCCccEEEEEcC--------HHHHHHHHHcCCCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence            4334433333322445666777664        2567889999988754  45789999999999999999999999875

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.58  E-value=3.7e-14  Score=125.43  Aligned_cols=219  Identities=16%  Similarity=0.187  Sum_probs=146.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      +.+..++.+..  .+++++.+.++++.+|.+.+    +++|.++|+++|+++++|.+++ +  .+..  ++...+..|++
T Consensus       130 ~~~~~~~~~~~--~~~~~v~~~~~~t~tG~~~~----~~~i~~~~~~~~~~~~vD~~ss-~--g~~p--id~~~~~~d~~  198 (388)
T d2ch1a1         130 SLETLARAIEL--HQPKCLFLTHGDSSSGLLQP----LEGVGQICHQHDCLLIVDAVAS-L--CGVP--FYMDKWEIDAV  198 (388)
T ss_dssp             CHHHHHHHHHH--HCCSEEEEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-B--TTBC--CCTTTTTCCEE
T ss_pred             chhhhhhhhcc--CCcceeeeeecccccccccc----hhhhcchhccccceeeeeeeec-c--cccc--cchhccCceEE
Confidence            56666666665  36889999999999999999    9999999999999999999998 1  1223  34445567877


Q ss_pred             Eec--ccccCCcccceeeEeCHHHHhhcCCCC-----------------------ccCCCCCCHHHHHHHHHHHHHHhhc
Q 021893          126 ILG--KALGGGVIPVSAVLADKEVMLCIQPGE-----------------------HGSTFGGNPLASAVAIASLDVIRDE  180 (306)
Q Consensus       126 s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~aa~~al~~~~~~  180 (306)
                      ++|  |+++|.. .+|++..+++..+......                       ....++.+...+.++..+++.+...
T Consensus       199 ~~s~~K~~~gp~-G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~~~~~l~~~~~~  277 (388)
T d2ch1a1         199 YTGAQKVLGAPP-GITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEE  277 (388)
T ss_dssp             ECCCC-CCCCCS-SCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             EEccccccCCCC-eEEEEeccHHHHHhhhcccCccccccccchhhhhhhcccccccccCccchHHHHHHHHHHHHHHHHh
Confidence            666  7787666 7888989988776543210                       1112244566777777777776554


Q ss_pred             cHHH---HHHHHHHHHHHHHHHHHhhCCCceeeEE-EeeeEEEEEEecCCChhhHHHHHHHHHHC-CceeccC----CCC
Q 021893          181 KLAE---RSAHLGEELRQHLFKIQQQFPNYVKEVR-GRGLFNAVEFDKTALPVSAYDICLKMKER-GILAKPT----HDT  251 (306)
Q Consensus       181 ~~~~---~~~~~~~~l~~~L~~~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~~~-Gi~~~~~----~~~  251 (306)
                      ....   +.+......+..++......  .+.... ....++.+.+++   +.++.++.+.|+++ ||.++++    ..+
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~rs~~v~~~~~p~---g~~~~~l~~~l~~~~gI~v~~G~~~~~~~  352 (388)
T d2ch1a1         278 GLENQIKRRIECAQILYEGLGKMGLDI--FVKDPRHRLPTVTGIMIPK---GVDWWKVSQYAMNNFSLEVQGGLGPTFGK  352 (388)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTCCB--SSCSGGGBCTTEEEEECCT---TCCHHHHHHHHHHHHCBCCBCCCGGGTTT
T ss_pred             hhHHHHHHHHHHHHHHHhhhhhccccc--ccCCHHHhCCeEEEEECCC---CCCHHHHHHHHhhcCCEEEeCCCccccCC
Confidence            3322   33333333333343332111  111111 234456777764   56788999999776 9998875    356


Q ss_pred             EEEEe-CCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          252 IVRLT-PPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       252 ~lRi~-~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      .||++ ++..++.+||+.++++|+++|+ ...
T Consensus       353 ~~RIs~~g~~~t~edI~~ll~alke~L~-~~~  383 (388)
T d2ch1a1         353 AWRVGIMGECSTVQKIQFYLYGFKESLK-ATH  383 (388)
T ss_dssp             EEEEECCGGGCSHHHHHHHHHHHHHHHH-HHC
T ss_pred             EEEEcCCcCCCCHHHHHHHHHHHHHHHH-hhC
Confidence            89999 4567789999999999999998 643

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.55  E-value=4.6e-14  Score=123.74  Aligned_cols=247  Identities=16%  Similarity=0.159  Sum_probs=156.4

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDG   81 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~   81 (306)
                      +.+||+....|+|....+...         +..+...+.+++..|+++++++++   ++|++|++|.+.|++..+++   
T Consensus        98 Gd~vl~~~~~Yg~t~~l~~~~---------~~~~Gi~~~~~d~~d~~~~~~ai~---~~t~lv~~Esp~NP~l~v~D---  162 (392)
T d1gc0a_          98 GDEVLLGNTLYGCTFAFLHHG---------IGEFGVKLRHVDMADLQALEAAMT---PATRVIYFESPANPNMHMAD---  162 (392)
T ss_dssp             TCEEEEESSCCSHHHHHHHHT---------GGGGTCEEEEECTTCHHHHHHHCC---TTEEEEEEESSCTTTCCCCC---
T ss_pred             CCeeecccccchhhhhhhhhh---------hccCCcccccCCccCHHHHHHhCC---CCCeEEEecccccceeeecc---
Confidence            457888888887655332211         111223456777889999999998   68999999999999999999   


Q ss_pred             HHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--EecccccC-CcccceeeEeCHHHHhhcC--CCCc
Q 021893           82 YLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLADKEVMLCIQ--PGEH  156 (306)
Q Consensus        82 ~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~g~~~~~~~~~~~~~--~~~~  156 (306)
                       |++|+++|+++|+++++|++.+.      ++.+..+.+.+|++  |.+|.++| +-.-.|.++++++.+...+  ....
T Consensus       163 -i~~i~~ia~~~g~~~vvDnT~at------P~~~~Pl~~GaDivihS~TKyi~Ghsd~~~G~v~~~~~~~~~~r~~~~~~  235 (392)
T d1gc0a_         163 -IAGVAKIARKHGATVVVDNTYCT------PYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKD  235 (392)
T ss_dssp             -HHHHHHHHGGGTCEEEEECTTTH------HHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHH
T ss_pred             -hHHHHHHHHhcCCEEEEecCccC------ccccChHHhCCCEEEEecceeecCCcccccccccchhHHHHHHHHHHHHH
Confidence             99999999999999999999862      12244444556665  78899984 3325667888887776543  2222


Q ss_pred             cCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----hCC---------CceeeEEEeeeEEEEEEe
Q 021893          157 GSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ----QFP---------NYVKEVRGRGLFNAVEFD  223 (306)
Q Consensus       157 ~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~---------~~~~~~~~~g~~~~i~~~  223 (306)
                      ......++..+..+...++.+...  .++..++...+.+.|+....    .+|         -......+.|.++.+.+.
T Consensus       236 ~~G~~~~p~da~ll~rgl~TL~lR--m~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~gg~~sf~l~  313 (392)
T d1gc0a_         236 MTGAVLSPHDAALLMRGIKTLNLR--MDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELK  313 (392)
T ss_dssp             HTCCCCCHHHHHHHHHHHTTHHHH--HHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEET
T ss_pred             ccCCcCChhhHHHHHhccccHHHH--HHHHHHHHHHHHHHHHhCCCccEEeeccccCCcccccccccccCCCcEEEEEEe
Confidence            234445677777777777666442  45566666777777765420    001         011233345778888885


Q ss_pred             cCCChhhHHHHHHHHH--HCCceec--------c-----------------CCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 021893          224 KTALPVSAYDICLKMK--ERGILAK--------P-----------------THDTIVRLTPPLSISSNELQEGSKALHDV  276 (306)
Q Consensus       224 ~~~~~~~~~~~~~~l~--~~Gi~~~--------~-----------------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~  276 (306)
                      ..  ......|++.|.  ..+.-.+        |                 ..++.||+++.+    |+.+.+++.|+++
T Consensus       314 ~~--~~~~~~f~~~L~l~~~a~SlGg~eSLi~~pa~~th~~~~~e~r~~~Gi~~~liRlSVGl----Ed~eDLi~Dl~~A  387 (392)
T d1gc0a_         314 GG--IGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGL----EDIDDLLADVQQA  387 (392)
T ss_dssp             TH--HHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHH
T ss_pred             CC--HHHHHHHHHhCCcceEeeccCCcChhhcCccccccccCCHHHHHHcCCCcCeEEEEeee----CCHHHHHHHHHHH
Confidence            31  123445666553  2222211        1                 035789999543    5666677777777


Q ss_pred             Hh
Q 021893          277 LE  278 (306)
Q Consensus       277 l~  278 (306)
                      |+
T Consensus       388 L~  389 (392)
T d1gc0a_         388 LK  389 (392)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.53  E-value=2.3e-13  Score=119.85  Aligned_cols=211  Identities=18%  Similarity=0.200  Sum_probs=132.1

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc--CCEEEEehhhhcccccccccccccCCCCCc
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--NILMIADEIQSGLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~--gi~li~De~~~g~~~~g~~~~~~~~~~~~d  123 (306)
                      |+++++++|+   ++|++|+++++++.+|.+.+    ++++.++++.+  ++++++|.+|.    .|.. ..+.....+|
T Consensus       128 d~~~l~~~i~---~~t~lv~is~v~~~tG~~~~----~~~i~~~~~~~~~~~~~~vD~~q~----~g~~-~~d~~~~~~D  195 (376)
T d1eg5a_         128 KLEELEKLVD---EDTFLVSIMAANNEVGTIQP----VEDVTRIVKKKNKETLVHVDAVQT----IGKI-PFSLEKLEVD  195 (376)
T ss_dssp             CHHHHHHHCC---TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHHCTTCEEEEECTTT----TTTS-CCCCTTTCCS
T ss_pred             CHHHHHHhcC---CCceEEEEECCccccceeee----ehhhhhhhhhcccCceeEEEeeec----cccc-cccccccCcc
Confidence            6889999887   68999999999999999999    99999988655  99999999997    2221 1233334456


Q ss_pred             EE--EecccccCCcccceeeEeCHHHHhhcCCCCcc-------CCCCCCHHHHHHHHHHHHHHhh--ccHHHHHHHHHHH
Q 021893          124 MV--ILGKALGGGVIPVSAVLADKEVMLCIQPGEHG-------STFGGNPLASAVAIASLDVIRD--EKLAERSAHLGEE  192 (306)
Q Consensus       124 ~~--s~sK~~~~G~~~~g~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~  192 (306)
                      ++  +..|++| +. +.|+++.+++.  .+++....       .....+..+...+..+.+....  ...........++
T Consensus       196 ~~~~s~~K~~g-p~-G~~~l~~~~~~--~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (376)
T d1eg5a_         196 YASFSAHKFHG-PK-GVGITYIRKGV--PIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSK  271 (376)
T ss_dssp             EEEEEGGGGTS-CT-TCEEEEECTTS--CCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             ceecccceeec-CC-CceeEEeccCc--ccCCcccCCCCcccccCCcccchhhhhHHHHhhccccchhhhhhhhhhhhhh
Confidence            55  6669864 44 56667776553  23332111       1122344555554444444332  2223344444444


Q ss_pred             HHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-----------------------
Q 021893          193 LRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-----------------------  249 (306)
Q Consensus       193 l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-----------------------  249 (306)
                      +.+.|+......  .............+.++    ..++..+...|.++||.++.+.                       
T Consensus       272 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~L~~~gI~vr~G~~c~~~~~~~~~~l~~~gi~~~~~  345 (376)
T d1eg5a_         272 LVSGLMNLGAHI--ITPLEISLPNTLSVSFP----NIRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIA  345 (376)
T ss_dssp             HHHHHHTTTCEE--CSCTTSBCTTEEEEECT----TCCHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHH
T ss_pred             hccccccccccc--cccccccccceeeeccC----CCCHHHHHHHHhhCCeEEeCcchhcCCccchhHHHHHcCCCcccC
Confidence            544444432110  00000111222233333    3567888899999999886431                       


Q ss_pred             CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          250 DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       250 ~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .+.+|++++.++|++||+.+++.|+++++
T Consensus       346 ~~~iRiS~~~ynt~edid~l~~~L~~iv~  374 (376)
T d1eg5a_         346 QGAIRISLCKYNTEEEVDYFLKKIEEILS  374 (376)
T ss_dssp             HHEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCCCCHHHHHHHHHHHHHHHh
Confidence            24699999999999999999999999875

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.50  E-value=1.1e-13  Score=121.05  Aligned_cols=220  Identities=11%  Similarity=0.139  Sum_probs=142.4

Q ss_pred             cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893           39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE  118 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~  118 (306)
                      +.+++..|+++++++++   +++++|++|.+.|++..+++    +++|+++|+++|+++|+|++....      +.+...
T Consensus       115 ~~~~d~~~~~~~~~ai~---~~t~li~~EtpsNP~l~v~D----i~~i~~iA~~~g~~~vVDnT~atP------~~~~Pl  181 (380)
T d1ibja_         115 VKRVNTTKLDEVAAAIG---PQTKLVWLESPTNPRQQISD----IRKISEMAHAQGALVLVDNSIMSP------VLSRPL  181 (380)
T ss_dssp             EEEECTTSHHHHHHHCC---SSEEEEEECSSCTTTCCCCC----HHHHHHHHHTTTCEEEEECTTTCT------TTCCGG
T ss_pred             ccccCcchHHHHHHHhc---cCccEEEecccccccccccc----HHHHHHHHHHcCCeEEeecccccc------cccccc
Confidence            46677788999998887   68999999999999999999    999999999999999999998631      223333


Q ss_pred             CCCCcEE--EecccccC-CcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 021893          119 EVRPDMV--ILGKALGG-GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELR  194 (306)
Q Consensus       119 ~~~~d~~--s~sK~~~~-G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~  194 (306)
                      .+..|++  |.+|.++| +-.-.|.++.+ +++.+.++.......-..++..+......++.+...  .++..++...+.
T Consensus       182 ~~GaDiVvhS~TKyi~GhsDv~~G~v~~~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~Tl~lR--m~~~~~nA~~lA  259 (380)
T d1ibja_         182 ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMALR--IEKQQENARKIA  259 (380)
T ss_dssp             GTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTTHHHH--HHHHHHHHHHHH
T ss_pred             ccCCCEEEecccceeccccCccccccccchhhHHHHHHhhccccCCcCCHHHHHHHHhcchhhhhh--HHHHHHHHHHHH
Confidence            4456655  78899984 22145555555 566666554333334445677777777777655432  455666677777


Q ss_pred             HHHHHHHh----hCCCc---------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHH--HCCceec--------cC---
Q 021893          195 QHLFKIQQ----QFPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMK--ERGILAK--------PT---  248 (306)
Q Consensus       195 ~~L~~~~~----~~~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~--~~Gi~~~--------~~---  248 (306)
                      +.|++...    .+|+.         .....+.|.++.+.+..   ......|.+.|.  ..++-++        |.   
T Consensus       260 ~~L~~hp~V~~V~yPgl~s~p~~~~a~~~~~~~g~~~s~~~~~---~~~a~~f~d~l~l~~~a~SlG~~~SLi~~p~~~t  336 (380)
T d1ibja_         260 MYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS---VALSKHLVETTKYFSIAVSFGSVKSLISMPCFMS  336 (380)
T ss_dssp             HHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSC---HHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTT
T ss_pred             HHHHhCCCeeEEeccccccCccccccccccccccccccccccH---HHHHHHHHHhCCcCeEeeccCCccccccCchhhh
Confidence            77765321    11100         01223456666665543   344555666553  2122111        10   


Q ss_pred             --------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          249 --------------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       249 --------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                                    .++.||++..  .  |+.+.+++.|+++|+ .+
T Consensus       337 h~~~~~e~r~~~Gi~~~lvRlSvG--l--E~~eDLi~Dl~qAl~-~l  378 (380)
T d1ibja_         337 HASIPAEVREARGLTEDLVRISAG--I--EDVDDLISDLDIAFK-TF  378 (380)
T ss_dssp             TCSCCSSSSSSSSCCTTCEEEECC--S--SCHHHHHHHHHHHHH-SC
T ss_pred             hhcCCHHHHHHcCCCcCeEEEEec--c--CCHHHHHHHHHHHHH-hc
Confidence                          2578999954  2  677788899988888 54

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.49  E-value=2.3e-13  Score=119.37  Aligned_cols=220  Identities=12%  Similarity=0.138  Sum_probs=140.2

Q ss_pred             CcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccccc
Q 021893           38 GHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW  117 (306)
Q Consensus        38 ~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~  117 (306)
                      .+.+++..|++.++++|+   ++|++|++|.+.|++..+.+    +++|+++|+++|+++++|++...      ++.+..
T Consensus       129 ~~~~vd~~d~~~~~~~i~---~~Tklv~~Esp~NP~l~v~D----i~~i~~iA~~~gi~~vvDnT~at------P~~~~P  195 (397)
T d1y4ia1         129 NVRFVDAGKPEEIRAAMR---PETKVVYIETPANPTLSLVD----IETVAGIAHQQGALLVVDNTFMS------PYCQQP  195 (397)
T ss_dssp             EEEEECTTSHHHHHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTTC------TTTCCG
T ss_pred             EeeccCCCCHHHHHHhcC---CCCcEEEecCCcccceeecc----cHHHHHHhhcCCceEEecCcccC------cccCcc
Confidence            356777889999999997   68999999999999999999    99999999999999999999762      222344


Q ss_pred             CCCCCcEE--EecccccC-CcccceeeEeCHHHHhhc--CCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Q 021893          118 EEVRPDMV--ILGKALGG-GVIPVSAVLADKEVMLCI--QPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEE  192 (306)
Q Consensus       118 ~~~~~d~~--s~sK~~~~-G~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~  192 (306)
                      ..+..|++  |.+|.++| +-.-.|.++++++.+.+.  ...........++..+..+...++.+...  .++..++...
T Consensus       196 l~~GaDivihS~TKyi~Ghsdvl~G~v~~~~~~~~~~r~~~~~~~~G~~l~p~~a~l~~rgl~TL~lR--m~~~~~nA~~  273 (397)
T d1y4ia1         196 LQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDITGGCMSPFNAWLTLRGVKTLGIR--MERHCENALK  273 (397)
T ss_dssp             GGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHTTHHHH--HHHHHHHHHH
T ss_pred             hhcCCCEEEEehhhhcCCCcceeeeccCCCHHHHHHHHHHHHHhCcCCcCCHHHHHHHHcCcCcHHHH--HHHHHHHHHH
Confidence            44455655  78899984 321556788888766543  22222234445677777777777665432  4555566666


Q ss_pred             HHHHHHHHHh----hCCCc---------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHH--HCCceec--------cC-
Q 021893          193 LRQHLFKIQQ----QFPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMK--ERGILAK--------PT-  248 (306)
Q Consensus       193 l~~~L~~~~~----~~~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~--~~Gi~~~--------~~-  248 (306)
                      +.+.|++...    .+|+.         .....+.|.++.|.+...  ......|++.|.  ..+.-.+        |. 
T Consensus       274 lA~~L~~hp~V~~V~yPgl~s~p~h~~~~~~~~g~gg~~sf~~~~~--~~~~~~f~~~L~l~~~a~SlGg~eSLi~~p~~  351 (397)
T d1y4ia1         274 IARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGG--LEAGRRMINSVELCLLAVSLGDTETLIQHPAS  351 (397)
T ss_dssp             HHHHHHTCTTEEEEECTTSTTCTTHHHHHHHCSSCCSEEEEEETTH--HHHHHHHHHTCSSSEECSCCSCSSCEEECTTT
T ss_pred             HHHHHHhCCCcCeEeCCCCCCCccccccccccCCCCeEEEEEecCC--HHHHHHHHHcCCccceeeccCcccceeeCccc
Confidence            7777765321    11100         012234577888877531  122344554442  1111111        21 


Q ss_pred             ----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          249 ----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       249 ----------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                      .++.||++..+    ||.+.+++.|+++|+
T Consensus       352 ~th~~~~~e~r~~~Gi~~~liRlsvGl----Ed~~DLi~Dl~~AL~  393 (397)
T d1y4ia1         352 MTHSPVAPEERLKAGITDGLIRLSVGL----EDPEDIINDLEHAIR  393 (397)
T ss_dssp             TTTSSSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHHH
T ss_pred             cccccCCHHHHHHcCCCcCEEEEEecc----CCHHHHHHHHHHHHH
Confidence                            35799999543    556667777777776

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.48  E-value=1.8e-13  Score=119.68  Aligned_cols=223  Identities=14%  Similarity=0.128  Sum_probs=140.9

Q ss_pred             CcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhccccccccccccc
Q 021893           38 GHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDW  117 (306)
Q Consensus        38 ~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~  117 (306)
                      .+.+++..|.+.+++.++   +++++|++|.+.|++..+++    |++|+++|+++|+++|+|++...      ++.+..
T Consensus       116 ~~~~~d~~d~~~~~~~~~---~~t~~v~~EspsNP~l~v~D----i~~i~~ia~~~g~~~vVDNT~at------P~~~~P  182 (384)
T d1cs1a_         116 RVLFVDQGDEQALRAALA---EKPKLVLVESPSNPLLRVVD----IAKICHLAREVGAVSVVDNTFLS------PALQNP  182 (384)
T ss_dssp             EEEEECTTCHHHHHHHHH---TCCSEEEEECSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTTC------TTTCCG
T ss_pred             ccccccCCCHHHHHhhcc---ccccEEEEeccccccceecc----HHHHhhhhhhcCcEEEEeccccC------cccccc
Confidence            346677789999999998   68999999999999999999    99999999999999999999852      122344


Q ss_pred             CCCCCcEE--EecccccC-CcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 021893          118 EEVRPDMV--ILGKALGG-GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEEL  193 (306)
Q Consensus       118 ~~~~~d~~--s~sK~~~~-G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l  193 (306)
                      ..+..|++  |.+|.++| |-.-.|.++.+ +++.+.++..........++..+..+...++.+...  .++..++...+
T Consensus       183 l~~GaDiVvhS~TKyi~Ghsdv~~G~vv~~~~~~~~~~~~~~~~~G~~~~p~~a~ll~rgL~TL~lR--m~~~~~nA~~l  260 (384)
T d1cs1a_         183 LALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRTLVPR--MELAQRNAQAI  260 (384)
T ss_dssp             GGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTTHHHH--HHHHHHHHHHH
T ss_pred             cccCCCEEEEccccccccCCCcccccccCCchhhhhhhhhhhhhhhhccccccHHHHhhccchhHHH--HHHHHHHHHHH
Confidence            44456655  88899984 32255566664 555555443222333445677766666666655432  45556666666


Q ss_pred             HHHHHHHHh----hCCCc---------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHC--Cceec--------c---
Q 021893          194 RQHLFKIQQ----QFPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMKER--GILAK--------P---  247 (306)
Q Consensus       194 ~~~L~~~~~----~~~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~--Gi~~~--------~---  247 (306)
                      .+.|+....    .+|+.         .....+.|.++.+.+...  ......|++.|.=-  +.-.+        |   
T Consensus       261 A~~L~~hp~V~~V~yPgL~s~p~h~l~~r~~~g~gg~~sf~l~~~--~~~a~~f~~~L~l~~~a~SlGg~eSLi~~p~~~  338 (384)
T d1cs1a_         261 VKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD--EQTLRRFLGGLSLFTLAESLGGVESLISHAATM  338 (384)
T ss_dssp             HHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSC--HHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGT
T ss_pred             HHhcccCCceeeeeeccccchhHHHHHHhhcCCCcceeEEeecch--HHHHHHHHHhCCcceeccccCCccceecccccc
Confidence            666665321    11100         012334577888877641  22344555554311  11111        1   


Q ss_pred             --------------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          248 --------------THDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       248 --------------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                                    ..++.||++..    -|+++.+++.|+++|+ ...
T Consensus       339 th~~~~~e~r~~~Gi~~~lvRlSvG----lEd~eDLi~Dl~~AL~-aa~  382 (384)
T d1cs1a_         339 THAGMAPEARAAAGISETLLRISTG----IEDGEDLIADLENGFR-AAN  382 (384)
T ss_dssp             TTTTSCHHHHHHHTCCTTEEEEECC----SSCHHHHHHHHHHHHH-HHT
T ss_pred             ccccCCHHHHHhcCCCcCeEEEEec----cCCHHHHHHHHHHHHH-Hhc
Confidence                          13578999954    3667778888888877 544

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.46  E-value=5.1e-13  Score=117.24  Aligned_cols=219  Identities=18%  Similarity=0.189  Sum_probs=141.8

Q ss_pred             cccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccC
Q 021893           39 HLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWE  118 (306)
Q Consensus        39 ~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~  118 (306)
                      +.+++..+.+..++.+..  +++++|++|.+.|++..+++    |++|+++|+++|+++|+|++.+      .++.+..+
T Consensus       134 ~~~~~~~~~~~~~~~~~~--~~t~~v~~EspsNP~l~v~D----i~~ia~ia~~~g~~~vVDnT~a------tP~~~~Pl  201 (398)
T d1qgna_         134 ATVIDPADVGALELALNQ--KKVNLFFTESPTNPFLRCVD----IELVSKLCHEKGALVCIDGTFA------TPLNQKAL  201 (398)
T ss_dssp             EEEECSSCHHHHHHHHHH--SCEEEEEEESSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTT------CTTTCCTT
T ss_pred             cccccccchhhhhhhhcc--ccceEEEccCccccccccch----HHHHHHHHhhcCCEEEecceee------ccccCCch
Confidence            345555566655554443  68999999999999999999    9999999999999999999976      22334555


Q ss_pred             CCCCcEE--EecccccC--CcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 021893          119 EVRPDMV--ILGKALGG--GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELR  194 (306)
Q Consensus       119 ~~~~d~~--s~sK~~~~--G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~  194 (306)
                      .+..|++  |.+|.++|  .. -.|.+..+++.++.++..........++..+..+...++.+...  .++..++...+.
T Consensus       202 ~~GaDiVihS~TKy~~Ghsdv-~~G~v~~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~TL~lR--m~~~~~nA~~lA  278 (398)
T d1qgna_         202 ALGADLVLHSATKFLGGHNDV-LAGCISGPLKLVSEIRNLHHILGGALNPNAAYLIIRGMKTLHLR--VQQQNSTALRMA  278 (398)
T ss_dssp             TTTCSEEEECTTTTTTCSSSC-CCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGGHHHH--HHHHHHHHHHHH
T ss_pred             hhCCCEEEEechhhcCcccce-eehhhcchhhhhhhhhhhcccCCCcCCHHHHHHHHhcchHHHHH--HHHHHHHHHHHH
Confidence            6667766  77799984  33 45667788888776654333334455677777777666655432  456666777777


Q ss_pred             HHHHHHHh----hCCCce---------eeEEEeeeEEEEEEecCCChhhHHHHHHHHH--HCCceec--------c----
Q 021893          195 QHLFKIQQ----QFPNYV---------KEVRGRGLFNAVEFDKTALPVSAYDICLKMK--ERGILAK--------P----  247 (306)
Q Consensus       195 ~~L~~~~~----~~~~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~--~~Gi~~~--------~----  247 (306)
                      +.|++...    .+|+..         ....+.|.++.|.+...  ......|++.|.  ..+.-.+        |    
T Consensus       279 ~~L~~hp~V~~V~yPgL~s~p~~~~~~~~~~g~g~~~sf~~~g~--~~~a~~f~~~L~l~~~a~SlGg~~SLi~~p~~~t  356 (398)
T d1qgna_         279 EILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGD--LLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMS  356 (398)
T ss_dssp             HHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSC--HHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHH
T ss_pred             HHHHhCCCeeecCCCCCCCCcchhhhhhhcCCCCceeeeeecCC--HHHHHHHHHcCCcceeeeCCCCCcceeeCcchhc
Confidence            77766321    111100         12234577777776531  334556776663  2232222        1    


Q ss_pred             -------------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          248 -------------THDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       248 -------------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                   ..++.||++..    -|+.+.+++.|+++|+
T Consensus       357 h~~~~~~~~~~~Gi~~~liRlSvG----lEd~eDLi~Dl~~AL~  396 (398)
T d1qgna_         357 YWDLSQSDRAKYGIMDNLVRFSFG----VEDFDDLKADILQALD  396 (398)
T ss_dssp             STTSCHHHHHTTTCCSSEEEEECC----SSCHHHHHHHHHHHHH
T ss_pred             cccCCHHHHHhcCCCcCEEEEEec----cCCHHHHHHHHHHHHh
Confidence                         03579999954    3667777888888876

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.46  E-value=8.7e-13  Score=118.95  Aligned_cols=235  Identities=14%  Similarity=0.071  Sum_probs=142.9

Q ss_pred             CCHHHHHHHHHhcC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc-c-cccc---cccc-ccc
Q 021893           45 GDITALEKIFKESG-DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG-L-ARSG---RMLA-SDW  117 (306)
Q Consensus        45 ~d~~~le~~i~~~~-~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g-~-~~~g---~~~~-~~~  117 (306)
                      .|++.|++.|+.+. +++.+++++..+|+.|..+.+.+.+++|.++|++||+.++.|+++.. . ...+   ..+. ...
T Consensus       158 ~d~~~le~~I~~~~~~~~~~i~~e~~~n~~gG~~~~~~~l~~i~~~a~~~~~~~~~D~a~~~~~a~~~~~~~~~~~~~~i  237 (456)
T d1c7ga_         158 IDLNKLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSI  237 (456)
T ss_dssp             BCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHSTTCTTSCH
T ss_pred             CCHHHHHHHhhhcCCccceeEEeeecccccccceecHHHHHHHHHHHHHcCCEEEEEcchhhcchhhhcccccccCCCCh
Confidence            48999999999764 56789999999998888888999999999999999999999999861 0 0000   0000 000


Q ss_pred             ------CCCCCcEEEe--cccccCCcccceeeEeC-HHHHhhcCCC----CccCCCC-CCHHHHHHHHHHHHHHhhccHH
Q 021893          118 ------EEVRPDMVIL--GKALGGGVIPVSAVLAD-KEVMLCIQPG----EHGSTFG-GNPLASAVAIASLDVIRDEKLA  183 (306)
Q Consensus       118 ------~~~~~d~~s~--sK~~~~G~~~~g~~~~~-~~~~~~~~~~----~~~~~~~-~~~~~~~aa~~al~~~~~~~~~  183 (306)
                            ..-..|++++  +|.++++.  .|+++.+ +++.++++..    ....++. .+...+.++...+.....++..
T Consensus       238 ~~i~~~~~~~ad~~s~s~~K~~~~~~--GG~i~~~~~~l~~~~r~~~~~~~g~~~~g~~~~~~~~a~a~~l~e~~~~~~l  315 (456)
T d1c7ga_         238 KDIVHEMFSYADGCTMSGKKDCLVNI--GGFLCMNDEEMFSAAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYI  315 (456)
T ss_dssp             HHHHHHHHTTCSEEEEETTTTTCCSS--CEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTCHHHH
T ss_pred             hhhccccccccccEEEeccccccccc--eeEEEcCCHHHHHHHHHhccccCCCcccchhhHHHHHHHHHHHHHhcCHHHH
Confidence                  0012466654  47776332  2456655 5566655432    1111222 2333444444445544444556


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEec----CC-ChhhHHHHHHHH-HHCCceeccC---------
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDK----TA-LPVSAYDICLKM-KERGILAKPT---------  248 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~----~~-~~~~~~~~~~~l-~~~Gi~~~~~---------  248 (306)
                      ++..++.++|.++|++.+..     ...+..+..+.++...    .+ ......++...+ .+.||...+.         
T Consensus       316 ~~r~~~~~~L~e~L~~~g~~-----vv~p~g~~~v~vda~~~~~~i~~~~~~~~~~~~~l~~~~GIr~~~~g~~~~~~~~  390 (456)
T d1c7ga_         316 EHRVKQVRYLGDKLREAGVP-----IVEPTGGHAVFLDARRFCPHLTQDQFPAQSLAASIYMETGVRSMERGIVSAGRSK  390 (456)
T ss_dssp             HHHHHHHHHHHHHHHHTTCC-----BCSSCCSSEEEEEHHHHCTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCS
T ss_pred             HHHHHHHHHHHHHHHhccCC-----cccCCCCcceeEechhhccCCCcccccHHHHHHHHHHHhCeeecccCccccccCC
Confidence            66677778999999887422     1223344444443221    11 112244554444 4668765421         


Q ss_pred             --------CCCEEEEeCCC-CCCHHHHHHHHHHHHHHHhhhcCCCCCC
Q 021893          249 --------HDTIVRLTPPL-SISSNELQEGSKALHDVLELDLPKMRKP  287 (306)
Q Consensus       249 --------~~~~lRi~~~~-~~t~~~i~~~~~~l~~~l~~~~~~~~~~  287 (306)
                              ....+|++++. ..|+++||.+++.|+++.+ .....++.
T Consensus       391 ~~g~~~~~~~e~vRLaip~~~~T~e~iD~Vae~i~~v~~-~~~~i~gl  437 (456)
T d1c7ga_         391 ETGENHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQ-HKEDIRGL  437 (456)
T ss_dssp             SSCCBCCCSCCEEEEECCTTSCCHHHHHHHHHHHHHHHT-TGGGCCCE
T ss_pred             cccCccCCccceEEEecCcccCCHHHHHHHHHHHHHHHh-hhhhcCCc
Confidence                    13469999763 4599999999999999998 65555443

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.42  E-value=1.6e-12  Score=117.64  Aligned_cols=218  Identities=12%  Similarity=-0.029  Sum_probs=132.7

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhc-cccccc-ccccccC------CCCCcEEEe--c
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSG-LARSGR-MLASDWE------EVRPDMVIL--G  128 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g-~~~~g~-~~~~~~~------~~~~d~~s~--s  128 (306)
                      .++..+++...++..|.+.+    +++|.++|++||++|++|++|+. +...+. .......      ....|++++  .
T Consensus       172 ~~~~~v~v~~~~~~~G~~~d----l~~I~~ia~~~g~~l~vD~A~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~~S~H  247 (462)
T d1c4ka2         172 KRPFRLAVIQLGTYDGTIYN----AHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVH  247 (462)
T ss_dssp             SCCBSEEEEESBCTTSEEEC----HHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHH
T ss_pred             cCCceeEEEEeeeeccchhh----HHHHHHHHHHcCCEEEEechhhccccccCcCCcchhhccccccccCCccEEEEecC
Confidence            45667777788888999999    99999999999999999999973 211111 1111111      112366655  4


Q ss_pred             ccccCCcccceeeEeCHHHHhhcCCC----------CccCCCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHH
Q 021893          129 KALGGGVIPVSAVLADKEVMLCIQPG----------EHGSTFGGNPLASAVAIASLDVIRD---EKLAERSAHLGEELRQ  195 (306)
Q Consensus       129 K~~~~G~~~~g~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~  195 (306)
                      |.+++.- ..+++..+...+......          ....+.+++...+++..++...+..   +++.++..++.+++++
T Consensus       248 K~lg~~~-~g~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~t~sp~~~~~asl~~a~~~~~~~~g~~l~~~~~~~a~~~r~  326 (462)
T d1c4ka2         248 KQQAGFS-QTSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARK  326 (462)
T ss_dssp             HHSSCCT-TCEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccc-ceEEEEeccccccccchhhhHHHHHHhhhhcccCCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence            9888433 333455554433221111          1122334455555555566665543   3456677788888888


Q ss_pred             HHHHHHhhCCCcee-eEE----------------------------------Eee-----eEEEEEEecC--------CC
Q 021893          196 HLFKIQQQFPNYVK-EVR----------------------------------GRG-----LFNAVEFDKT--------AL  227 (306)
Q Consensus       196 ~L~~~~~~~~~~~~-~~~----------------------------------~~g-----~~~~i~~~~~--------~~  227 (306)
                      +++++...+..... .+.                                  ...     .-+.+..+..        ..
T Consensus       327 ~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~k~~l~~~gi~~~~g~~~~~  406 (462)
T d1c4ka2         327 KLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDF  406 (462)
T ss_dssp             HHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSS
T ss_pred             HHHHhhhhhhcccccccccccccccchHhhhcccchhccCCcchhccccccCccceecccceeEEecCCccccccchhhc
Confidence            88876422100000 000                                  000     0011211100        01


Q ss_pred             hhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcC
Q 021893          228 PVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHDVLELDLP  282 (306)
Q Consensus       228 ~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~  282 (306)
                      +..+..+.+.|.++||.+...+.+.+|++++..+|++|++.++++|+++.+ .+.
T Consensus       407 G~~~~~~~~~L~~~gI~~e~~~~~~i~~~~s~~~T~edid~li~aL~ei~r-~~~  460 (462)
T d1c4ka2         407 GVPATIVANYLRDHGIIPEKSDLNSILFLMTPAETPAKMNNLITQLLQLQR-LIE  460 (462)
T ss_dssp             CCCHHHHHHHHHHTTCCCSEECSSEEEEECCTTCCHHHHHHHHHHHHHHHH-HHH
T ss_pred             CCcHHHHHHHHHHcCCeeeccCCCeEEEEecCCCCHHHHHHHHHHHHHHHH-HHh
Confidence            234678899999999988877788999999999999999999999999877 654

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.37  E-value=6.4e-11  Score=106.95  Aligned_cols=224  Identities=12%  Similarity=0.062  Sum_probs=139.0

Q ss_pred             CHHHHHHHHHh---cCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCC-C
Q 021893           46 DITALEKIFKE---SGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEV-R  121 (306)
Q Consensus        46 d~~~le~~i~~---~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~-~  121 (306)
                      |+++|++.|++   .+..+.+|+.+...+.+|.+-|    +++|.++|++|++++++|.+++|+...-........++ .
T Consensus       218 d~~~L~~~i~~~~~~g~~p~~VvataGtt~~G~iDp----l~~I~~i~~~~~~wlHVDAA~Gg~~~~~~~~~~~~~gi~~  293 (476)
T d1js3a_         218 RASALQEALERDKAAGLIPFFVVATLGTTSCCSFDN----LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEF  293 (476)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGG
T ss_pred             CHHHHHHHHHHHHhcCCCcEEEeecCCCccceeecc----HHHHHHHHHhcCcEEEEecccchhhhhhcchhhhhcCCcc
Confidence            79999999986   2345778888888888999888    99999999999999999999997532222111111233 3


Q ss_pred             CcEEEec--ccccCCcccceeeEeCH-HHH-hhcCCC-------C-c------cC--CC-CCCHHHHHHHHHHHHHHhhc
Q 021893          122 PDMVILG--KALGGGVIPVSAVLADK-EVM-LCIQPG-------E-H------GS--TF-GGNPLASAVAIASLDVIRDE  180 (306)
Q Consensus       122 ~d~~s~s--K~~~~G~~~~g~~~~~~-~~~-~~~~~~-------~-~------~~--~~-~~~~~~~~aa~~al~~~~~~  180 (306)
                      .|.++++  |.+...+ ..|+++.++ ... ..+...       . .      ..  +. .+-......+..+++.+..+
T Consensus       294 aDSit~d~HK~l~~P~-~~g~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~G~~  372 (476)
T d1js3a_         294 ADSFNFNPHKWLLVNF-DCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVK  372 (476)
T ss_dssp             CSEEEECHHHHSSCCS-SCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHH
T ss_pred             cceeeecCccccccCC-cceeecccchHHHHHHHhcChhhhccccccccccccccccccccchhhHHHHHHHHHHHHhHh
Confidence            5777665  9988777 888887764 322 222110       0 0      00  00 11112223345566666655


Q ss_pred             cH---HHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCC-ceecc---CCCCEE
Q 021893          181 KL---AERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERG-ILAKP---THDTIV  253 (306)
Q Consensus       181 ~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~G-i~~~~---~~~~~l  253 (306)
                      ++   .++..++.+++.+.|++.    ++.....+..-..+.|.+.+.  +.....+.+.+.+.| +++.+   .+..++
T Consensus       373 g~~~~i~~~~~lA~~l~~~l~~~----~~fel~~~p~l~iV~Fr~~~~--d~~n~~l~~~l~~~G~~~~s~t~~~g~~~l  446 (476)
T d1js3a_         373 GLQAYIRKHVQLSHEFEAFVLQD----PRFEVCAEVTLGLVCFRLKGS--DGLNEALLERINSARKIHLVPCRLRGQFVL  446 (476)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHC----TTEEECSCCCSSEEEEEESSC--HHHHHHHHHHHHHHTSCBCEEEEETTEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcC----CCeEEECCCceEEEEEEccCC--hHHHHHHHHHHHhcCCEEEeeeeECCEEEE
Confidence            44   444455556666655554    222222223333445555431  233467888888887 44544   245589


Q ss_pred             EEeCC-CCCCHHHHHHHHHHHHHHHhhhc
Q 021893          254 RLTPP-LSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       254 Ri~~~-~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                      |+++. ..++++||+.+++.|++..+ ++
T Consensus       447 R~~i~n~~Tt~~did~~~~~i~~~a~-~l  474 (476)
T d1js3a_         447 RFAICSRKVESGHVRLAWEHIRGLAA-EL  474 (476)
T ss_dssp             EEECCCTTCCHHHHHHHHHHHHHHHH-HH
T ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHH-HH
Confidence            99875 56789999999999999887 64

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.34  E-value=6.5e-12  Score=107.95  Aligned_cols=219  Identities=16%  Similarity=0.158  Sum_probs=142.4

Q ss_pred             CcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHH-HHcCCEEEEehhhhcccccccccccc
Q 021893           38 GHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLC-SKYNILMIADEIQSGLARSGRMLASD  116 (306)
Q Consensus        38 ~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~-~~~gi~li~De~~~g~~~~g~~~~~~  116 (306)
                      .+.+++..|++.++++++   +++++|++|.+.|++..+.+    ++++.+++ +++|+++|+|++.+..      +.++
T Consensus        64 ~~~~~d~~d~~~~~~~i~---~~t~~i~~Es~~np~~~v~d----~~~~~~~~a~~~~~~~vVDnT~atp------~~~~  130 (331)
T d1pffa_          64 EVDFIDMAVPGNIEKHLK---PNTRIVYFETPANPTLKVID----IEDAVKQARKQKDILVIVDNTFASP------ILTN  130 (331)
T ss_dssp             EEEEECTTSTTHHHHTCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHTTSSSCEEEEECTTTHH------HHCC
T ss_pred             EEEEecccchhhHhhhcc---cccceeeeeccccccccccc----chhhhhhhhcccCceEEeecccccc------cccc
Confidence            457777789999998887   68999999999999988888    99888885 6799999999998632      2234


Q ss_pred             cCCCCCcEE--EecccccC-CcccceeeEeCHHHHhhc--CCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q 021893          117 WEEVRPDMV--ILGKALGG-GVIPVSAVLADKEVMLCI--QPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGE  191 (306)
Q Consensus       117 ~~~~~~d~~--s~sK~~~~-G~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~  191 (306)
                      .....+|++  |.+|.++| +-.-.|.++.+++.+...  ...........++..+......++.+...  .++..++..
T Consensus       131 pl~~GaDiVv~S~TKy~~Gh~d~~~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rgl~Tl~~R--m~~~~~nA~  208 (331)
T d1pffa_         131 PLDLGVDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDITGAIISPHDAWLITRGTLTLDMR--VKRAAENAQ  208 (331)
T ss_dssp             GGGGTCSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHHHHH--HHHHHHHHH
T ss_pred             ccccCCCEEEecchhhcCCCCccccccccccccchhhhhhhhhhhccCCCCCHHHHHHHHHHHHHHHHH--HHHHHHHHH
Confidence            444456665  77899985 332556778887665543  22222233445677777777777776543  556667777


Q ss_pred             HHHHHHHHHHhh----CCCc---------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHH--HCCceec--------c-
Q 021893          192 ELRQHLFKIQQQ----FPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMK--ERGILAK--------P-  247 (306)
Q Consensus       192 ~l~~~L~~~~~~----~~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~--~~Gi~~~--------~-  247 (306)
                      .+.+.|++...-    +|+.         .....+.|.++.+.+..   ......|++.|.  ..+.-.+        | 
T Consensus       209 ~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~g~l~sf~l~~---~~~~~~f~d~l~lf~~~~SlG~~~SLi~~p~  285 (331)
T d1pffa_         209 KVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDG---LEKAKKVLDNCHVVSLAVSLGGPESLIQHPA  285 (331)
T ss_dssp             HHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS---HHHHHHHHHTCSSSEECSSCCSSSCEEECHH
T ss_pred             HHHHhhhhCCcEEeeccccccCccHHHHHhhcccccCcccceeecc---HHHHHHHHHhCCcceecccCCCCceeEeCcc
Confidence            777777764311    1100         01233467778887763   344555555553  1122111        1 


Q ss_pred             ----------------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          248 ----------------THDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       248 ----------------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                      ..++.||++..+    |+.+.+++.|+++++
T Consensus       286 ~~~h~~~~~e~~~~~Gi~~~liRlsvGl----E~~~DLi~Dl~~AL~  328 (331)
T d1pffa_         286 SMTHAGVPKEEREAAGLTDNLIRLSVGC----ENVQDIIDDLKQALD  328 (331)
T ss_dssp             HHTSTTSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHHH
T ss_pred             ccccccCCHHHHHhcCCCcCeEEEEeee----CCHHHHHHHHHHHHH
Confidence                            135789999543    666777777777776

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.34  E-value=2e-12  Score=113.52  Aligned_cols=222  Identities=9%  Similarity=-0.005  Sum_probs=136.2

Q ss_pred             CcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHc--CCEEEEehhhhccccccccccc
Q 021893           38 GHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKY--NILMIADEIQSGLARSGRMLAS  115 (306)
Q Consensus        38 ~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~--gi~li~De~~~g~~~~g~~~~~  115 (306)
                      .+.+++..|.+++++.++   +++++|++|.+.|++..+++    +++++++|+++  |+++++|++.+.      ++.+
T Consensus       124 ~~~~~d~~d~~~~~~~i~---~~t~~i~~EtpsNP~l~v~D----i~~i~~~a~~~~~g~~~vVDnT~at------P~~~  190 (391)
T d1cl1a_         124 TTSWFDPLIGADIVKHLQ---PNTKIVFLESPGSITMEVHD----VPAIVAAVRSVVPDAIIMIDNTWAA------GVLF  190 (391)
T ss_dssp             EEEEECTTCGGGGGGTCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHCTTCEEEEECTTTT------TTSS
T ss_pred             ccccccCccccccccccc---cccceeeecccCcccccccc----cHHHHHHHHhccCCcEEEEeccccc------hhhh
Confidence            346666678888888777   68999999999999998998    99999999775  999999999862      2223


Q ss_pred             ccCCCCCcEE--EecccccC-CcccceeeEeCHHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Q 021893          116 DWEEVRPDMV--ILGKALGG-GVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEE  192 (306)
Q Consensus       116 ~~~~~~~d~~--s~sK~~~~-G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~  192 (306)
                      ..+.+..|++  |.+|.++| +-.-.|.++.+++.++.+...........++..+..+...++.+...  .++..++...
T Consensus       191 ~Pl~~GaDivvhS~TKy~~GhsdvlgG~vv~~~~~~~~~~~~~~~~G~~~~p~~a~ll~rgl~TL~lR--~~~~~~nA~~  268 (391)
T d1cl1a_         191 KALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRTLGVR--LRQHHESSLK  268 (391)
T ss_dssp             CGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHHTTCCCCHHHHHHHHHHHTTHHHH--HHHHHHHHHH
T ss_pred             cccccccceEEeecchhccccccccccceeccccccccchhhhhcccccCCchhhhhhhccchhHHHH--HHHHHHHHHH
Confidence            4444555655  77899984 32145567778777666543322233344666666666666554332  4555566666


Q ss_pred             HHHHHHHHHh----hCCCc---------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHH--HCCceec--------c--
Q 021893          193 LRQHLFKIQQ----QFPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMK--ERGILAK--------P--  247 (306)
Q Consensus       193 l~~~L~~~~~----~~~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~--~~Gi~~~--------~--  247 (306)
                      +.+.|++...    .+|+.         .....+.|.++.+.+...........|++.|.  ..+.-++        |  
T Consensus       269 vA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~e~~~~f~d~L~l~~~a~SlG~~~SLi~~~~~  348 (391)
T d1cl1a_         269 VAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGYESLILANQP  348 (391)
T ss_dssp             HHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCBCCSCCCSSSCEEEEECH
T ss_pred             HHHHHHhcccccccccccccchhhHHHHhhccCCCCcceeeeecCCCCHHHHHHHHHcCCcceEeeCCCCCccceeCCcc
Confidence            6666665320    01100         01223445666777764211122333443332  2222211        0  


Q ss_pred             -------------CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          248 -------------THDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       248 -------------~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                   ..++.||++..+    |+++.+++.|+++|+
T Consensus       349 ~~~~~~~~~~~~gi~~~liRlSVGl----Ed~eDLi~Dl~~AL~  388 (391)
T d1cl1a_         349 EHIAAIRPQGEIDFSGTLIRLHIGL----EDVDDLIADLDAGFA  388 (391)
T ss_dssp             HHHHHTSTTCCCCCCSCEEEEECCS----SCHHHHHHHHHHHHH
T ss_pred             cccccCCchHhcCCCcCEEEEEecc----CCHHHHHHHHHHHHH
Confidence                         035789999542    677788888888887

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=99.31  E-value=6.6e-11  Score=106.19  Aligned_cols=223  Identities=12%  Similarity=0.038  Sum_probs=143.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHH------HHHcCCEEEEehhhhccccccccccccc--
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDL------CSKYNILMIADEIQSGLARSGRMLASDW--  117 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l------~~~~gi~li~De~~~g~~~~g~~~~~~~--  117 (306)
                      |+++|+++++   +++++|++....+.+|.+-+    +++|.++      |+++|+++++|.+++|+...   |..+.  
T Consensus       188 d~~~L~~~i~---~~t~~Vv~t~gtt~tG~~dp----v~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~p---~~~~~~~  257 (450)
T d1pmma_         188 DPKRMIEACD---ENTIGVVPTFGVTYTGNYEF----PQPLHDALDKFQADTGIDIDMHIDAASGGFLAP---FVAPDIV  257 (450)
T ss_dssp             CHHHHHHHCC---TTEEEEECBBSCTTTCBBCC----HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHH---HHCTTCC
T ss_pred             cHHHHHHHhh---hCceEEEeeeeeccCCCccc----cchhhHHHHHHHHHhccCcEEEeehhhccceee---eechhhh
Confidence            7999999998   57999999999999998876    6666665      46789999999999864211   11111  


Q ss_pred             --CCC-CCcEEEec--ccccCCcccceeeEeCHHH-Hhh-cCC-----C----CccCCCCCCHHHHHHHHHHHHHHhhcc
Q 021893          118 --EEV-RPDMVILG--KALGGGVIPVSAVLADKEV-MLC-IQP-----G----EHGSTFGGNPLASAVAIASLDVIRDEK  181 (306)
Q Consensus       118 --~~~-~~d~~s~s--K~~~~G~~~~g~~~~~~~~-~~~-~~~-----~----~~~~~~~~~~~~~~aa~~al~~~~~~~  181 (306)
                        +++ ..|.++++  |.+.+.+ ++|+++.+.+. ... +..     .    .....++.+...+......++.+..++
T Consensus       258 ~~~~~~~aDSi~~s~HK~~~~p~-g~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~~~~~~l~~~G~~G  336 (450)
T d1pmma_         258 WDFRLPRVKSISASGHKFGLAPL-GCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREG  336 (450)
T ss_dssp             CSTTSTTEEEEEEETTTTTCCCS-SCEEEEESSGGGSCGGGCEEEEETTEEEEECCSCCSCBSHHHHHHHHHHHHHHHHH
T ss_pred             hhhcccceeEeecChhhccCCCC-CeeEEEecChhhhhhhcccccCcCCCCcCCCcccCccchHHHHHHHHHHhhhhHHH
Confidence              111 35666666  9888777 88999886442 211 110     0    011111223344445566666665543


Q ss_pred             ---HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEE----eeeEEEEEEecCC-ChhhHHHHHHHHHHCCceec----cC-
Q 021893          182 ---LAERSAHLGEELRQHLFKIQQQFPNYVKEVRG----RGLFNAVEFDKTA-LPVSAYDICLKMKERGILAK----PT-  248 (306)
Q Consensus       182 ---~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~----~g~~~~i~~~~~~-~~~~~~~~~~~l~~~Gi~~~----~~-  248 (306)
                         ..++..++.+++.++|++..    +.....++    .-..+.|.+.+.. ...+..++.+.|+++|..+.    |. 
T Consensus       337 ~~~~~~~~~~la~~l~~~L~~~~----~~el~~~~~p~~~l~~V~Fr~~~~~~~~~~~~~l~~~L~~~Gw~v~~~~~p~~  412 (450)
T d1pmma_         337 YTKVQNASYQVAAYLADEIAKLG----PYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGE  412 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTS----CEEEEEECCTTTBSSEEEEEECTTCCCSSCHHHHHHHHHTTTCBCCEEECCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCC----CeEEEeCCCCCCceEEEEEecCCcccCCCCHHHHHHHHHHcCCeeeccCcCCC
Confidence               45566666777777776652    12112111    1223555554322 23456789999999996653    21 


Q ss_pred             --CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCCC
Q 021893          249 --HDTIVRLTPPLSISSNELQEGSKALHDVLELDLPKM  284 (306)
Q Consensus       249 --~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~~  284 (306)
                        ....+|+.+.-.+|+++++.+++.|+++++ ++.++
T Consensus       413 ~~~~~~lRvvv~~~~t~e~~d~lv~dl~~~v~-~l~~~  449 (450)
T d1pmma_         413 ATDIVVMRIMCRRGFEMDFAELLLEDYKASLK-YLSDH  449 (450)
T ss_dssp             CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHH-HHHHC
T ss_pred             cCCcEEEEEEccCCCCHHHHHHHHHHHHHHHH-HHHhC
Confidence              345799999889999999999999999999 87654

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.31  E-value=3.1e-11  Score=105.91  Aligned_cols=222  Identities=14%  Similarity=0.120  Sum_probs=139.2

Q ss_pred             CcccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH-HcCCEEEEehhhhcccccccccccc
Q 021893           38 GHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCS-KYNILMIADEIQSGLARSGRMLASD  116 (306)
Q Consensus        38 ~~~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~-~~gi~li~De~~~g~~~~g~~~~~~  116 (306)
                      .+.+++..|.+++++.++   +++++|++|.+.|++..+++    ++++.+.++ ++|+++|+|++.+.      ++.++
T Consensus       125 ~~~~~d~~d~~~~~~~i~---~~t~lv~~Etp~NP~l~v~D----i~~~~~~~~~~~g~~vvvDnT~at------P~~~~  191 (394)
T d1e5ea_         125 QVDFINTAIPGEVKKHMK---PNTKIVYFETPANPTLKIID----MERVCKDAHSQEGVLVIADNTFCS------PMITN  191 (394)
T ss_dssp             EEEEECTTSTTHHHHHCC---TTEEEEEEESSCTTTCCCCC----HHHHHHHHHTSTTCEEEEECTTTC------TTTCC
T ss_pred             eeeccCCCCHHHHHHhhc---ccccEEEEeccCCcceeeeh----hhhhhhccccccCeEEEecCcccC------cccCC
Confidence            357777889999999998   68999999999999998988    999988665 57899999999862      12244


Q ss_pred             cCCCCCcEE--EecccccC-CcccceeeEeCHHHHhhc--CCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q 021893          117 WEEVRPDMV--ILGKALGG-GVIPVSAVLADKEVMLCI--QPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGE  191 (306)
Q Consensus       117 ~~~~~~d~~--s~sK~~~~-G~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~  191 (306)
                      .+.+..|++  |.+|.++| +-.-.|.++++++.+...  ...........++..+..+...++.+...  .++..++..
T Consensus       192 Pl~~GaDiVvhS~TKy~~GhsDv~~G~v~~~~~~~~~~~~~~~~~~~G~~lsp~~a~ll~rgl~TL~lR--m~r~~~nA~  269 (394)
T d1e5ea_         192 PVDFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDITGSVISPHDAWLITRGLSTLNIR--MKAESENAM  269 (394)
T ss_dssp             GGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTTHHHH--HHHHHHHHH
T ss_pred             chhcCCCEEEechhhhcCCCcccccccccchhhHHHHHHHHHHHHhhCCCCChHHHHHHHhhchhHHHH--HHHHHHHHH
Confidence            444556655  78899984 332566788887766543  22223334445677777777777665442  456666777


Q ss_pred             HHHHHHHHHHh----hCCCc---------eeeEEEeeeEEEEEEecCCChhhHHHHHHHHH--HCCceec--------cC
Q 021893          192 ELRQHLFKIQQ----QFPNY---------VKEVRGRGLFNAVEFDKTALPVSAYDICLKMK--ERGILAK--------PT  248 (306)
Q Consensus       192 ~l~~~L~~~~~----~~~~~---------~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~--~~Gi~~~--------~~  248 (306)
                      .+.+.|++...    .+|+.         .....+.|.++.+.+...  ...+..|++.|.  ..+.-.+        |.
T Consensus       270 ~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~G~~~sf~~~~~--~~~a~~f~~~l~l~~~a~SlGg~eSLi~~p~  347 (394)
T d1e5ea_         270 KVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSG--FEGAKKLLDNLKLITLAVSLGGCESLIQHPA  347 (394)
T ss_dssp             HHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTH--HHHHHHHHHTCSSSEESSCCCSSSCEEECGG
T ss_pred             HHHHHHhhcCCccEEeCCCcccccchhhhhcccccCCCeeeeeccCC--HHHHHHHHHhCCccceeeccCCccceeECcc
Confidence            77777776421    11100         001224477777776531  122334444442  1121111        10


Q ss_pred             -----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHhhhc
Q 021893          249 -----------------HDTIVRLTPPLSISSNELQEGSKALHDVLELDL  281 (306)
Q Consensus       249 -----------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~  281 (306)
                                       .++.||++..+    |+++.+++.|+++++ .+
T Consensus       348 ~~th~~~~~~~r~~~Gi~~~liRlSVGl----Ed~eDLi~Dl~qAl~-~l  392 (394)
T d1e5ea_         348 SMTHAVVPKEEREAAGITDGMIRLSVGI----EDADELIADFKQGLD-AL  392 (394)
T ss_dssp             GTTTTTSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHHH-HH
T ss_pred             ccccccCCHHHHHhcCCCcCEEEEEecc----CCHHHHHHHHHHHHH-Hh
Confidence                             25789999543    566667777777776 44

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.29  E-value=2.7e-12  Score=109.13  Aligned_cols=206  Identities=12%  Similarity=0.055  Sum_probs=113.2

Q ss_pred             cEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccc--cccccccccCCCCCcEEEecccccCCccc
Q 021893           60 QIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLAR--SGRMLASDWEEVRPDMVILGKALGGGVIP  137 (306)
Q Consensus        60 ~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~--~g~~~~~~~~~~~~d~~s~sK~~~~G~~~  137 (306)
                      .+..+++....+++|.+. ..+.+..+.+.|+++|.++++|+++.+...  .+............++.+.++..+.+...
T Consensus       130 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~d~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (340)
T d1svva_         130 VIPKLVYISNTTEVGTQY-TKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFG  208 (340)
T ss_dssp             CEEEEEEEESSCTTSCCC-CHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTCSSC
T ss_pred             Ccceeeeecccccccccc-cHHHhhhhhcccccccceeeeeccceeeeecccccccccccccccceeeecCCcccccccc
Confidence            345555555555555444 577789999999999999999999974211  11111111111123455555555533313


Q ss_pred             ceeeEeCHHHHhhcCCC--CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEee
Q 021893          138 VSAVLADKEVMLCIQPG--EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRG  215 (306)
Q Consensus       138 ~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g  215 (306)
                      .++..............  ....+........+++...++........++..++.+++++.|+..+     .....+..+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-----~~~~~p~~~  283 (340)
T d1svva_         209 EALIILNDALKPNARHLIKQRGALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGLEACG-----IRLAWPSAS  283 (340)
T ss_dssp             EEEEECSGGGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTT-----CCBSSCCSS
T ss_pred             ccccccchhhhhhhhhhcccccCccchhhHHHHHHHHHhhhhHHHHHHHHHHHHHhhhHHHHhcCC-----CeeecCCCc
Confidence            33333333332222111  11122222233333333333222223355666667777777776653     222334445


Q ss_pred             eEEEEEEecCCChhhHHHHHHHHHHCCceeccCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Q 021893          216 LFNAVEFDKTALPVSAYDICLKMKERGILAKPTHDTIVRLTPPLSISSNELQEGSKALHD  275 (306)
Q Consensus       216 ~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~  275 (306)
                      .++++.++.    ....++.+.+...++.+.+.+.+.+|++++..+|++|||+++++|++
T Consensus       284 ~~v~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~vR~s~~~~~t~edid~~l~~l~~  339 (340)
T d1svva_         284 NQLFPILEN----TMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKECHRFVEVLKR  339 (340)
T ss_dssp             SEECBEEEH----HHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             eEEEEeCCH----HHHHHHHHhhhhhcccccCCCCcEEEEECCCCCCHHHHHHHHHHHhc
Confidence            666666652    33333333333335666677788999999999999999999999986

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.27  E-value=3.6e-11  Score=105.36  Aligned_cols=216  Identities=13%  Similarity=0.155  Sum_probs=135.5

Q ss_pred             ccccCCCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH----HcCCEEEEehhhhccccccccccc
Q 021893           40 LKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCS----KYNILMIADEIQSGLARSGRMLAS  115 (306)
Q Consensus        40 ~~~~~~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~----~~gi~li~De~~~g~~~~g~~~~~  115 (306)
                      .+++ ++.++++++++   +++++|++|.+.|++..+++    +++|+++|+    ++|+++|+|++....      +.+
T Consensus       122 ~~~~-~~~~~~~~~i~---~~t~lv~~EspsNP~l~v~D----i~~ia~~a~~~~~~~g~~lvVDnT~atP------~~~  187 (393)
T d1n8pa_         122 SFTN-DLLNDLPQLIK---ENTKLVWIETPTNPTLKVTD----IQKVADLIKKHAAGQDVILVVDNTFLSP------YIS  187 (393)
T ss_dssp             EEES-SHHHHHHHHSC---SSEEEEEECSSCTTTCCCCC----HHHHHHHHHHHTTTTTCEEEEECTTTHH------HHC
T ss_pred             EEee-cchHHHHHHhh---hhcceeEecCcchhhhhccc----hhhhhhhhhhhcccCCceEEEecCccCc------ccC
Confidence            4444 45678888887   68999999999999999998    999999999    789999999998621      223


Q ss_pred             ccCCCCCcEE--EecccccC--CcccceeeEeC-HHHHhhcCCCCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHH
Q 021893          116 DWEEVRPDMV--ILGKALGG--GVIPVSAVLAD-KEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLG  190 (306)
Q Consensus       116 ~~~~~~~d~~--s~sK~~~~--G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~  190 (306)
                      +...+..|++  |.+|.++|  -. -.|.++.+ +++.+.++..........++..+..++..++.+...  .++..++.
T Consensus       188 ~Pl~~GADiVvhS~TKyi~GhsDv-~~G~v~~~~~~~~~~l~~~~~~~G~~~~p~~a~ll~rgl~Tl~lR--~~~~~~nA  264 (393)
T d1n8pa_         188 NPLNFGADIVVHSATKYINGHSDV-VLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKTLHLR--VRQAALSA  264 (393)
T ss_dssp             CGGGGTCSEEEEETTTTTTCSSCC-CCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTTHHHH--HHHHHHHH
T ss_pred             CchhhCCCEEEEccccccCCCCcc-ccceeeecchhHHHHHHHHHhhcCCCCChHHHHHHHhCCcchhhH--HHHHHHHH
Confidence            4444455655  77899984  33 55666654 566666654333333455677777777777655432  45555666


Q ss_pred             HHHHHHHHHHHh-----hCCCce---------eeE--EEeeeEEEEEEecCCChhhHHHHHHHHH--HCCceec------
Q 021893          191 EELRQHLFKIQQ-----QFPNYV---------KEV--RGRGLFNAVEFDKTALPVSAYDICLKMK--ERGILAK------  246 (306)
Q Consensus       191 ~~l~~~L~~~~~-----~~~~~~---------~~~--~~~g~~~~i~~~~~~~~~~~~~~~~~l~--~~Gi~~~------  246 (306)
                      ..+.+.|+.-..     .+|...         ...  .+.|.++.|.+...  ......|.+.|.  ..+.-.+      
T Consensus       265 ~~lA~~L~~~~~~V~~V~yP~l~~~~~~~~a~~~~~~~~~G~~~sf~l~~~--~~~~~~f~~~l~l~~~~~SlGg~~SLi  342 (393)
T d1n8pa_         265 NKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGG--AEAASKFASSTRLFTLAESLGGIESLL  342 (393)
T ss_dssp             HHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSC--HHHHHHHHHHCSSSEECSCCCCSSCEE
T ss_pred             HHHHHHHHhccCcEEEEecccccccccchhhhhccccCCCCceEEEEEeCC--HHHHHHHHHhCCcceecccCCCcCceE
Confidence            666666654210     111000         011  13477888888641  233555666653  2221111      


Q ss_pred             --cC-----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          247 --PT-----------------HDTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       247 --~~-----------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                        |.                 .++.||++..+    |+++.+++.|+++|+
T Consensus       343 ~~p~~~~h~~~~~~~r~~~gi~~~liRlSvGl----E~~~DLi~Dl~~AL~  389 (393)
T d1n8pa_         343 EVPAVMTHGGIPKEAREASGVFDDLVRISVGI----EDTDDLLEDIKQALK  389 (393)
T ss_dssp             ECTTTTTSCSSCTTTTTTTSCCTTEEEEECCS----SCHHHHHHHHHHHHH
T ss_pred             eCchhhccccCCHHHHHhcCCCcCEEEEEecc----CCHHHHHHHHHHHHH
Confidence              10                 24789999543    567777777777776

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.19  E-value=9.6e-11  Score=102.62  Aligned_cols=215  Identities=17%  Similarity=0.188  Sum_probs=125.6

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCc
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d  123 (306)
                      .|++.|+++++   ++|++|++.+..   |...+    +++|.++|++||++||.|++|+ |.-..+..  ...++  ..
T Consensus       107 ~d~~~l~~~i~---~~tkaIi~~h~~---G~~~~----~~~i~~i~~~~~i~vIeD~a~a~g~~~~~~~--~g~~g--~~  172 (376)
T d1mdoa_         107 VTPEHIEAAIT---PQTKAIIPVHYA---GAPAD----LDAIYALGERYGIPVIEDAAHATGTSYKGRH--IGARG--TA  172 (376)
T ss_dssp             BCHHHHHHHCC---TTEEEECCBCGG---GCCCC----HHHHHHHHHHHTCCBCEECTTCTTCEETTEE--TTSSS--EE
T ss_pred             CCHHHHHHhcC---CCCeEEEEeCCC---CCccc----hhHHHHHHHhcCceEEeccchhccCeeCCee--ccccc--Cc
Confidence            38999999998   579999887654   55667    9999999999999999999998 21111111  12222  23


Q ss_pred             EEEec--ccccCCcccceeeEe-CHHHHhhcCCCC------------------------ccCCCCCCHHHHHHHHHHHHH
Q 021893          124 MVILG--KALGGGVIPVSAVLA-DKEVMLCIQPGE------------------------HGSTFGGNPLASAVAIASLDV  176 (306)
Q Consensus       124 ~~s~s--K~~~~G~~~~g~~~~-~~~~~~~~~~~~------------------------~~~~~~~~~~~~~aa~~al~~  176 (306)
                      +.||.  |.+++|-  .|.++. ++++.+.++...                        ....+..+.+..+.+...++.
T Consensus       173 ~~Sf~~~K~l~~g~--GG~i~t~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aai~~~qL~~  250 (376)
T d1mdoa_         173 IFSFHAIKNITCAE--GGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQK  250 (376)
T ss_dssp             EEECCTTSSSCSSS--CEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHT
T ss_pred             cccCCCcCCCCCCC--CCEEEEechhHHHHHHhhcccCCcccccccccccccccccchhcccccccchhhhhhhhhhhhh
Confidence            44554  8887543  344555 465655443211                        011223344555555554443


Q ss_pred             HhhccHHHHHHHHHHHHHHHHHHHHhh-CCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccC-------
Q 021893          177 IRDEKLAERSAHLGEELRQHLFKIQQQ-FPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPT-------  248 (306)
Q Consensus       177 ~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------  248 (306)
                      +  +++.++.+++.+++.+.|...... .+............+.+.++.........++.+.|.++||.+++.       
T Consensus       251 ~--~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Rd~l~~~L~~~gI~~~~~y~~~~~~  328 (376)
T d1mdoa_         251 L--DALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQ  328 (376)
T ss_dssp             H--HHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGGGS
T ss_pred             h--hHHHHHHhhhhhhhhhhcccccccccccccccccccccccccccccccchhhHHHHHHHHHHCCCCeeeECcchhcC
Confidence            3  345666677777777777664311 000001111111222222221000112457999999999987631       


Q ss_pred             ------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          249 ------------------HDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       249 ------------------~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                                        ....+.+=.+...+++|+++.++.|++++
T Consensus       329 ~~~~~~~~~~~~p~a~~~~~~~i~LP~~~~lt~~ei~~I~~~i~~i~  375 (376)
T d1mdoa_         329 KYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIA  375 (376)
T ss_dssp             HHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhhCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHh
Confidence                              12456665556779999999999999875

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=99.17  E-value=8.1e-11  Score=102.61  Aligned_cols=193  Identities=7%  Similarity=-0.045  Sum_probs=111.6

Q ss_pred             CCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHHhh
Q 021893           71 GEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLC  150 (306)
Q Consensus        71 ~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~~~  150 (306)
                      +.+|...+    +++|.++|+++|+++++|.+++ +  .+..  ++...++.|+.+.+|.++++- ..+++...+.+.+.
T Consensus       147 ~~tg~~~~----~~~i~~~~~~~~al~~vDavss-~--g~~~--id~~~~di~~~s~~k~~~~~~-~~~~~~~~~~~~~~  216 (361)
T d2c0ra1         147 LTSNETIE----GAQFKAFPDTGSVPLIGDMSSD-I--LSRP--FDLNQFGLVYAGAQKNLGPSG-VTVVIVREDLVAES  216 (361)
T ss_dssp             EESEETTT----TEECSSCCCCTTSCEEEECTTT-T--TSSC--CCGGGCSEEEEETTTTTCCSS-CEEEEEEGGGSSSC
T ss_pred             Eeccccee----cceEEEeeccCCceEEEEeecc-c--cccc--cccccceeEEEeccccccccc-CcEEEEEhHHhhhC
Confidence            34566666    7788899999999999999997 1  1223  344456778889999988432 33444444443322


Q ss_pred             cCCC-----------CccCCCCCCHHHHHHHHHHHHHHhhccHH----HHHHHHHHHHHHHHHHHHhhCCCceeeEEE--
Q 021893          151 IQPG-----------EHGSTFGGNPLASAVAIASLDVIRDEKLA----ERSAHLGEELRQHLFKIQQQFPNYVKEVRG--  213 (306)
Q Consensus       151 ~~~~-----------~~~~~~~~~~~~~~aa~~al~~~~~~~~~----~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~--  213 (306)
                      ....           ........++.....+..+.......+..    .+.+.....+.+.........  .....+.  
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~r  294 (361)
T d2c0ra1         217 PKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFY--RGCVDVDSR  294 (361)
T ss_dssp             CTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSS--EESSCGGGB
T ss_pred             ccccccccccccccccccccccccceeeehhhhHHHhhhhccchHHHHHHHHHHHHHhhhhhhhccccc--ccCCChhhc
Confidence            2111           11111123334333434333333332222    222222233322222221111  1111111  


Q ss_pred             eeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          214 RGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       214 ~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      +...+.+.+++   +.+..++.+.|.++||.+..+.  -+.||++...+++.||++.+++.|++..+
T Consensus       295 S~~~~~~~~~~---~~~~~~~~~~L~~~GI~~~~G~~~~g~~RIs~~~~~~~edv~~Lv~~l~~~~~  358 (361)
T d2c0ra1         295 SDMNITFRLAS---EELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKR  358 (361)
T ss_dssp             CSSEEEEECSC---HHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             cceEEEEECCC---cccHHHHHHHHHHCCCEEecCCCcCCeEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence            22345555554   5678899999999999998763  23499999999999999999999998765

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=99.16  E-value=7.6e-11  Score=103.90  Aligned_cols=247  Identities=16%  Similarity=0.112  Sum_probs=138.8

Q ss_pred             cceEEEEecCCCCcccchhcccCCccccccCCCCCCCcccccCCC-HHHHHHHHHhcCCcEEEEEEccccCCCCcccCCh
Q 021893            2 QAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGD-ITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPD   80 (306)
Q Consensus         2 ~~~ii~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~   80 (306)
                      +.+||+....|+|....+.....         .+...+.+++.+| .+..++.++   ++|++|++|.+.|++..+++  
T Consensus        97 gd~il~~~~~Yg~t~~l~~~~~~---------~~gi~~~~~d~~~~~~~~~~~~~---~~t~li~~EtpsNP~l~v~D--  162 (421)
T d2ctza1          97 GDNIVSTPNLYGGTFNQFKVTLK---------RLGIEVRFTSREERPEEFLALTD---EKTRAWWVESIGNPALNIPD--  162 (421)
T ss_dssp             TCEEEECSCCCHHHHHHHHTHHH---------HTTCEEEECCTTCCHHHHHHHCC---TTEEEEEEESSCTTTCCCCC--
T ss_pred             ccceeecCCcCCchhHHHHHHHh---------hccccceecccccCcchhccccC---CCceEEEEcCCCcceeEecc--
Confidence            35677777777664422211111         1112234444434 445555555   68999999999999999999  


Q ss_pred             hHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE--EecccccC-CcccceeeEeCHHHH-hhcCC---
Q 021893           81 GYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV--ILGKALGG-GVIPVSAVLADKEVM-LCIQP---  153 (306)
Q Consensus        81 ~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~--s~sK~~~~-G~~~~g~~~~~~~~~-~~~~~---  153 (306)
                        +++|+++|+++|+++|+|++.+.     .++.+....+.+|++  |.+|.++| +-.-.|.++.+++.+ +..+.   
T Consensus       163 --i~~i~~iA~~~g~~~vvDnT~a~-----tP~~~~Pl~~GaDiVvhS~TKyl~GHsD~l~G~vv~~~~~~~~~~r~~~~  235 (421)
T d2ctza1         163 --LEALAQAAREKGVALIVDNTFGM-----GGYLLRPLAWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLL  235 (421)
T ss_dssp             --HHHHHHHHHHHTCEEEEECGGGG-----GGTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHH
T ss_pred             --hHHHHHHHHhcCCceEecccccc-----cceeccccccCCcEEEEechhhccCCCCeEEEEEEcCCcchhhhcccccc
Confidence              99999999999999999999751     112234444556655  78899995 331455566544321 11110   


Q ss_pred             ----------------------------CCccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh---
Q 021893          154 ----------------------------GEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQ---  202 (306)
Q Consensus       154 ----------------------------~~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~---  202 (306)
                                                  .........++..+..+...++.+...  .++..++...+.+.|++...   
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~sP~~a~l~~rgl~TL~lR--m~~~~~nA~~vA~~L~~hp~V~~  313 (421)
T d2ctza1         236 TEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLSLR--AERHVENTLHLAHWLLEQPQVAW  313 (421)
T ss_dssp             HSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHTTHHHH--HHHHHHHHHHHHHHHHTCTTEEE
T ss_pred             cCCchhhhhhHHHHHhccHHHHHHHHHHHHHhccCCCCHHHHHHHhcCCcchhhH--HHHHHHHHHHHHhhhccCCCeeE
Confidence                                        000012234566666666666555332  45556666667777766421   


Q ss_pred             -hCCCc---------eeeEE-EeeeEEEEEEecCCChhhHHHHHHHHH--HCCceec--------c--------------
Q 021893          203 -QFPNY---------VKEVR-GRGLFNAVEFDKTALPVSAYDICLKMK--ERGILAK--------P--------------  247 (306)
Q Consensus       203 -~~~~~---------~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~l~--~~Gi~~~--------~--------------  247 (306)
                       .+|+.         ..... +.|.++.|.+...  ......|++.|.  ..+...+        |              
T Consensus       314 V~yPgL~s~p~~~~a~~~~~g~~G~~~sf~l~~~--~~~a~~f~~~L~l~~~a~SlGg~eSLi~~pa~~th~~~~~e~r~  391 (421)
T d2ctza1         314 VNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGG--YEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQA  391 (421)
T ss_dssp             EECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTH--HHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHH
T ss_pred             EecCCcCCCccHHHHHHhcCCCCceEEEEEecCC--HHHHHHHHHcCCcCeeccccccccceeeCcccccchhCCHHHHH
Confidence             11110         01112 3577888887531  122444555543  1121111        1              


Q ss_pred             ---CCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 021893          248 ---THDTIVRLTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       248 ---~~~~~lRi~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                         ..++.||+++.    -||.+.+++.|+++|
T Consensus       392 ~~GI~~~liRlSvG----lEd~eDLi~DL~qAL  420 (421)
T d2ctza1         392 QAGVSPEMVRLSVG----LEHVEDLKAELKEAL  420 (421)
T ss_dssp             HHTCCTTEEEEECC----SSCHHHHHHHHHHHT
T ss_pred             hcCCCcCeEEEEec----cCCHHHHHHHHHHhc
Confidence               13578999954    356667778777765

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.04  E-value=4.1e-09  Score=91.55  Aligned_cols=215  Identities=16%  Similarity=0.152  Sum_probs=138.9

Q ss_pred             CCHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCc
Q 021893           45 GDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPD  123 (306)
Q Consensus        45 ~d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d  123 (306)
                      -|.+.+++..++.  ++++|++-.  +......+    +++++++|++.|.+|++|.+|. |+...|. +. +.+.. .|
T Consensus       152 IDyd~l~~~a~~~--kPklIi~G~--S~y~r~~d----~~~~reiad~vga~l~~D~aH~~GLIa~g~-~~-sP~~~-aD  220 (416)
T d1dfoa_         152 IDYADLEKQAKEH--KPKMIIGGF--SAYSGVVD----WAKMREIADSIGAYLFVDMAHVAGLVAAGV-YP-NPVPH-AH  220 (416)
T ss_dssp             BCHHHHHHHHHHH--CCSEEEEEC--SSCCSCCC----HHHHHHHHHHTTCEEEEECTTTHHHHHHTS-SC-CCTTT-SS
T ss_pred             ccHHHHHHHHHHh--ccceEEecc--cccccccC----HHHHHHHHHhcCceEEcchhhhhcceeccc-cC-Ccccc-cc
Confidence            3899999999985  667777653  33445566    9999999999999999999997 6643332 32 22333 47


Q ss_pred             EEEe--cccccCCcccceeeEeC---HHHHhhcCCCCccCCCCC-CHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHH
Q 021893          124 MVIL--GKALGGGVIPVSAVLAD---KEVMLCIQPGEHGSTFGG-NPLASAVAIASLDVIRD---EKLAERSAHLGEELR  194 (306)
Q Consensus       124 ~~s~--sK~~~~G~~~~g~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~  194 (306)
                      +++.  .|.|.|.  |-|++..+   +++.+++......+...+ ..-.+++...++..+.+   .++.+++.++.+.|.
T Consensus       221 vvt~tThKtlrGP--rggiI~~~~~~~~~~~~i~~avfPg~qggp~~~~iaa~Aval~Ea~~~~fk~Y~~qvv~NA~~La  298 (416)
T d1dfoa_         221 VVTTTTHKTLAGP--RGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMV  298 (416)
T ss_dssp             EEEEESSSTTCCC--SCEEEEESSCCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHH
T ss_pred             eeeeehhhcccCC--CceEEEeccchHhHHHHHHhhhCcccccCccHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence            7744  4999744  56668775   566555543211122222 22233333455555433   347788888999999


Q ss_pred             HHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----cC------CCCEEEEeCC----CC
Q 021893          195 QHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----PT------HDTIVRLTPP----LS  260 (306)
Q Consensus       195 ~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~------~~~~lRi~~~----~~  260 (306)
                      +.|.+.+..    +..-.-...++.+++.+.  +....+..+.|.+-||.+-    |+      .+..||+..+    ..
T Consensus       299 ~~L~~~G~~----iv~ggTdnHlvlvdl~~~--~~~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG  372 (416)
T d1dfoa_         299 EVFLERGYK----VVSGGTDNHLFLVDLVDK--NLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRG  372 (416)
T ss_dssp             HHHHHTTCE----EGGGSCSSSEEEEECGGG--TCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTT
T ss_pred             HHHHhCCcc----cccCCCCCceeEEEeccc--CCCHHHHHHHHHHcCeEEeCCcCCCCCCCCCCCCceEeCCHHHHhCC
Confidence            888887522    111112445667777542  3456677777777799864    22      2457999865    34


Q ss_pred             CCHHHHHHHHHHHHHHHh
Q 021893          261 ISSNELQEGSKALHDVLE  278 (306)
Q Consensus       261 ~t~~~i~~~~~~l~~~l~  278 (306)
                      ..++|+.++.+.|.++++
T Consensus       373 ~~e~d~~~iA~~I~~~l~  390 (416)
T d1dfoa_         373 FKEAEAKELAGWMCDVLD  390 (416)
T ss_dssp             CCHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHH
Confidence            678999999999998887

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.04  E-value=5.2e-09  Score=90.47  Aligned_cols=214  Identities=14%  Similarity=0.129  Sum_probs=139.7

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |.++++++++++  ++++|++-....+  ...+    +++++++|++.|.+|+.|-+|. |+...|. ++.+ ++. .|+
T Consensus       151 D~d~l~~~a~~~--kPklIi~G~S~y~--r~~d----~~~~reIad~vga~l~~D~aH~~GLIa~g~-~~~P-~~~-aDv  219 (405)
T d1kl1a_         151 DYDDVREKARLH--RPKLIVAAASAYP--RIID----FAKFREIADEVGAYLMVDMAHIAGLVAAGL-HPNP-VPY-AHF  219 (405)
T ss_dssp             CHHHHHHHHHHH--CCSEEEECCSSCC--SCCC----HHHHHHHHHHHTCEEEEECTTTHHHHHTTS-SCCS-TTT-CSE
T ss_pred             cHHHHHHHHHhh--CcceEEecccccc--cccC----hHHHHHHHhhhCCEEecchhhHhhhhhhhh-cCCh-hhh-hhh
Confidence            789999999985  6777777554332  2445    9999999999999999999997 6633333 3222 333 587


Q ss_pred             EEec--ccccCCcccceeeEeCHHHHhhcCCCCccCCCCCC-HHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHH
Q 021893          125 VILG--KALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGN-PLASAVAIASLDVIRD---EKLAERSAHLGEELRQHLF  198 (306)
Q Consensus       125 ~s~s--K~~~~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~aa~~al~~~~~---~~~~~~~~~~~~~l~~~L~  198 (306)
                      ++.|  |.|.|.  |-|.+..++++.+++......+...++ .-.+++...++....+   .++.+++.++.+.|.+.|.
T Consensus       220 vt~tThKtlrGP--rgg~I~~~~~~~~~i~~avfPg~qggp~~~~iAa~Aval~Ea~~~~fk~Ya~qvv~NAkaLa~~L~  297 (405)
T d1kl1a_         220 VTTTTHKTLRGP--RGGMILCQEQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQ  297 (405)
T ss_dssp             EEEESSSTTCCC--SCEEEEECHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeccccccccCC--CCceEEecchhHHHHHhhhCcccccCcchhHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh
Confidence            7655  998754  667788998888776543222222222 2233333344444332   3477888888888888888


Q ss_pred             HHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----cC------CCCEEEEeCC----CCCCHH
Q 021893          199 KIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----PT------HDTIVRLTPP----LSISSN  264 (306)
Q Consensus       199 ~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~------~~~~lRi~~~----~~~t~~  264 (306)
                      +.+..    +..-.-...++++++.+.  +.......+.|.+.||.+-    |+      .+..||+..+    ....++
T Consensus       298 ~~G~~----vv~ggTd~H~vlvdl~~~--~~~g~~ae~~Le~agI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~  371 (405)
T d1kl1a_         298 NEGFT----LVSGGTDNHLLLVDLRPQ--QLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLE  371 (405)
T ss_dssp             HTTCE----EGGGSCSSSEEEEECGGG--TCCHHHHHHHHHHHTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHH
T ss_pred             cCCce----eecCCCccceeecccccc--CCcHHHHHHHHHHcCeEEcCCcCCCCCCCCCCCCceeecCHHHHhCCCCHH
Confidence            76422    111112456677777542  3345555566667798876    22      2357999865    356789


Q ss_pred             HHHHHHHHHHHHHh
Q 021893          265 ELQEGSKALHDVLE  278 (306)
Q Consensus       265 ~i~~~~~~l~~~l~  278 (306)
                      |+.++.+.|.++++
T Consensus       372 dm~~ia~~I~~~l~  385 (405)
T d1kl1a_         372 EMDEIAAIIGLVLK  385 (405)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999998887

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=99.03  E-value=7.6e-10  Score=96.07  Aligned_cols=196  Identities=14%  Similarity=0.044  Sum_probs=112.7

Q ss_pred             ccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccceeeEeCHHHH
Q 021893           69 IQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVM  148 (306)
Q Consensus        69 ~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~g~~~~~~~~~  148 (306)
                      ..+.+|.+.+    +++|.++|+++|+++|+|.+++ +  .+..+..+  .++.|+.+++|.++++- ..|++..++...
T Consensus       145 ~~~~tg~~~~----~~~i~~~~~~~g~l~ivDavqs-~--g~~~id~~--~~~vd~~~~~~~k~~~~-~~~~~~~~~~~~  214 (360)
T d1w23a_         145 LHITSNNTIY----GTQYQNFPEINHAPLIADMSSD-I--LSRPLKVN--QFGMIYAGAQKNLGPSG-VTVVIVKKDLLN  214 (360)
T ss_dssp             EEEESEETTT----TEECSSCCCCCSSCEEEECTTT-T--TSSCCCGG--GCSEEEEETTTTTSCTT-CEEEEEEHHHHC
T ss_pred             eEecCCcccc----ceeeeeccccceeeEEeecccc-c--cccccccc--cccceEEeeccccccCC-cceeeEechhhh
Confidence            3445677777    8899999999999999999998 2  22233333  45678999998887543 445555554443


Q ss_pred             hhcCCC-----------CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCc-ee----eEE
Q 021893          149 LCIQPG-----------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNY-VK----EVR  212 (306)
Q Consensus       149 ~~~~~~-----------~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~----~~~  212 (306)
                      +.....           ..............+....+.............+........+.......... ..    ..+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  294 (360)
T d1w23a_         215 TKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSR  294 (360)
T ss_dssp             SCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGB
T ss_pred             cccccCCcchhhhhhhhhhhhcccccceeeechhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhcccccccCCChhhc
Confidence            222221           11111223333333333333333332222222222222222222222111000 00    111


Q ss_pred             EeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          213 GRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       213 ~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      . ...+.|.+++   +....++...|.++||.+..+.  -+.+|++...++|.||++.+++.+++..+
T Consensus       295 S-~~vvsf~i~~---~~~~~~~~~~l~~~GI~~~~G~~~~ggiRiS~~~~~t~e~V~~Li~~~~~~~~  358 (360)
T d1w23a_         295 S-LMNVTFNLRN---EELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIALRELMIQFKE  358 (360)
T ss_dssp             C-SSEEEEECSS---HHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             c-eeEEEEEcCC---CccHHHHHHHHHHCCCeeeeCCCccCcEEEEeeCCCCHHHHHHHHHHHHHHHh
Confidence            1 2345666654   5667899999999999987652  23599997677799999999999988765

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=98.99  E-value=1.7e-09  Score=93.52  Aligned_cols=204  Identities=7%  Similarity=-0.095  Sum_probs=118.4

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEEecccccCCcccc
Q 021893           59 DQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPV  138 (306)
Q Consensus        59 ~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s~sK~~~~G~~~~  138 (306)
                      .+++++.+...++.+|...+    ++.+  .++.+++++++|.+++ +  .+  ..++.++++.++++.+|.++++. ..
T Consensus       137 ~~~~~v~v~~~~~~t~~~~~----~~~i--~~~~~~~~v~vDa~~~-~--~~--~~vd~~~~dv~~~ss~k~~~~~~-~~  204 (360)
T d1bjna_         137 LSDNAAYMHYCPNETIDGIA----IDET--PDFGADVVVAADFSST-I--LS--RPIDVSRYGVIYAGAQKNIGPAG-LT  204 (360)
T ss_dssp             CCSSCSCEEECSEETTTTEE----CCCC--CCCCTTCCEEEECTTT-T--TS--SCCCGGGCSEEEEETTTTTSSTT-CE
T ss_pred             cCCceeEEEecccccccCcc----ccce--ecccccceeeeeeecc-c--cc--eeeeeccceeEEEEcccccccCC-Cc
Confidence            45666666667777777766    3333  4677999999998876 2  11  23455667778888999999665 66


Q ss_pred             eeeEeCHHHHhhcCCC-----------CccCCCCCCHHHHHHHHHHHHHHhhcc----HHHHHHHHHHHHHHHHHHHHhh
Q 021893          139 SAVLADKEVMLCIQPG-----------EHGSTFGGNPLASAVAIASLDVIRDEK----LAERSAHLGEELRQHLFKIQQQ  203 (306)
Q Consensus       139 g~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~aa~~al~~~~~~~----~~~~~~~~~~~l~~~L~~~~~~  203 (306)
                      +++..++...+.....           ...............+...........    ..++..+....+...+......
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (360)
T d1bjna_         205 IVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFY  284 (360)
T ss_dssp             EEEEEGGGCSCCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSE
T ss_pred             eeEeeehhhhhccccCCcchhhHHHHhhhhhccccccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhccccc
Confidence            6666665543322211           111112233333333333222222222    2223333333333222222111


Q ss_pred             CCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          204 FPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH--DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       204 ~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                      .. .......+-..+.+.+++   +....++.+.|.++||.+..+.  -+.+|++...++|.+||+.+++.|++..+
T Consensus       285 ~~-~~~~~~rs~~v~~f~~~~---~~~~~~~~~~l~~~Gi~~~~G~~~~g~~Ris~~~~~t~edV~~li~~l~e~~~  357 (360)
T d1bjna_         285 RN-DVAKRNRSRMNVPFQLAD---SALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFER  357 (360)
T ss_dssp             EC-CBCGGGBCSSEEEEEESS---GGGHHHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             cc-cCCcccccceEEEEEcCC---cccHHHHHHHHHHCCCEeecCCCccCeEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence            00 000111123456677764   5678889999999999988763  23599999889999999999999998765

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=98.90  E-value=8.4e-08  Score=84.61  Aligned_cols=201  Identities=16%  Similarity=0.228  Sum_probs=126.3

Q ss_pred             CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEEE-eccccc----
Q 021893           58 GDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVI-LGKALG----  132 (306)
Q Consensus        58 ~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~s-~sK~~~----  132 (306)
                      ++++++|++..++.. |..-+    +++|.+++++.|.++++|.-...+   +...+...  +..|++. -+|.|+    
T Consensus       194 ~~~~Aavmi~~Pnt~-G~~ed----~~~i~~~~h~~G~l~~~~ad~~al---~~l~~Pg~--~GaDi~~g~~q~fg~p~g  263 (437)
T d1wyua1         194 GEEVGAVVVQNPNFL-GALED----LGPFAEAAHGAGALFVAVADPLSL---GVLKPPGA--YGADIAVGDGQSLGLPMG  263 (437)
T ss_dssp             CTTEEEEEEESSCTT-SBCCC----HHHHHHHHHHTTCEEEEECCTTGG---GTBCCHHH--HTCSEEEEECTTTTCCCG
T ss_pred             ccceeEEEEcccccc-ccccc----hHHHHHHhhhccceEEeeechhhh---hccccccc--cccceEeeccceeccccC
Confidence            368999988888654 55544    899999999999998877443211   11111122  2456552 257665    


Q ss_pred             -CCcccceeeEeCHHHHhhcCCCC-----------------------------ccCCCCCCHHHHHHHHHHHHHHhhcc-
Q 021893          133 -GGVIPVSAVLADKEVMLCIQPGE-----------------------------HGSTFGGNPLASAVAIASLDVIRDEK-  181 (306)
Q Consensus       133 -~G~~~~g~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~aa~~al~~~~~~~-  181 (306)
                       ||. ..|++.+++++...+-...                             .++..+.+.+.+..+...+..+..++ 
T Consensus       264 ~GGP-~~G~~a~~~~l~r~lPgrivg~s~d~~G~~~~~l~lqtreqhIrRekatsnict~q~l~a~~a~~Y~~~lG~~GL  342 (437)
T d1wyua1         264 FGGP-HFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGL  342 (437)
T ss_dssp             GGCS-CCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcC-ccccccccchhhccccccccccccccCCcccceeecccccccccccccccchhhHHHHHHHHHHHHhhhcCcccH
Confidence             677 7899999988876554320                             11122345555555555566655543 


Q ss_pred             --HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----c-CCCCEEE
Q 021893          182 --LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----P-THDTIVR  254 (306)
Q Consensus       182 --~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----~-~~~~~lR  254 (306)
                        +.++...+..+++++|.+..     .+........+-.+.+.-   +.+..++.+.|+++|+...    + ...+.+.
T Consensus       343 ~~ia~~a~~~A~yl~~~L~~~~-----g~~~~~~~~~f~ef~v~~---~~~~~~i~k~L~d~G~~~~~~~~~~~~~~~ll  414 (437)
T d1wyua1         343 REVALKSVEMAHKLHALLLEVP-----GVRPFTPKPFFNEFALAL---PKDPEAVRRALAERGFHGATPVPREYGENLAL  414 (437)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTST-----TCEECSCSSBCSEEEEEC---SSCHHHHHHHHHHTTCCCCEECCTTSCSSEEE
T ss_pred             HHHHHHHHHHHHHHHHHhhhcC-----CeeccCCCCeeeEEEEEC---CCCHHHHHHHHHhCCCCCCcccccCCCCCeEE
Confidence              45566677777777776642     111111222222333331   3467899999999998743    2 2467899


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHH
Q 021893          255 LTPPLSISSNELQEGSKALHDVL  277 (306)
Q Consensus       255 i~~~~~~t~~~i~~~~~~l~~~l  277 (306)
                      ++|.=..|++|||.++++|++++
T Consensus       415 i~~TE~~tkeeiD~~v~al~eil  437 (437)
T d1wyua1         415 FAATELHEEEDLLALREALKEVL  437 (437)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHC
T ss_pred             EecCCCCCHHHHHHHHHHHHHhC
Confidence            99988899999999999998864

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=98.85  E-value=8.2e-08  Score=83.54  Aligned_cols=211  Identities=13%  Similarity=0.195  Sum_probs=119.3

Q ss_pred             HHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcEEEec-
Q 021893           51 EKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDMVILG-  128 (306)
Q Consensus        51 e~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~~s~s-  128 (306)
                      ++......++++++++.+..+   ..++    +++|.++|+++|++||.|.+|+ |.-..|..     .|-.-|+.+|| 
T Consensus       102 ~~~~~~~~~~~~aii~~~~~G---~~~d----~~~i~~~~~~~~i~vIED~a~a~g~~~~~~~-----~G~~gd~~~fSf  169 (374)
T d1o69a_         102 KLAIKECEKKPKALILTHLYG---NAAK----MDEIVEICKENDIVLIEDAAEALGSFYKNKA-----LGTFGEFGVYSY  169 (374)
T ss_dssp             HHHHHHCSSCCCEEEEECGGG---CCCC----HHHHHHHHHHTTCEEEEECTTCTTCEETTEE-----TTSSSSEEEEEC
T ss_pred             cccchhccccccccccccccc---chhh----hHHHHHHhhccCcchhhhhhhhhcceECCee-----cCCCCceEEEec
Confidence            333333336788888877763   4456    9999999999999999999998 22122221     22233666554 


Q ss_pred             ---ccccCCcccceeeEe-CHHHHhhcCCC--------------CccCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHH
Q 021893          129 ---KALGGGVIPVSAVLA-DKEVMLCIQPG--------------EHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLG  190 (306)
Q Consensus       129 ---K~~~~G~~~~g~~~~-~~~~~~~~~~~--------------~~~~~~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~  190 (306)
                         |.+++|- + |.++. ++++++.++..              ..+..+..+.+.++.+...++.+.  +..++-+++.
T Consensus       170 ~~~K~l~tge-G-G~i~tnn~~~~~~~~~~~~~g~~~~~~~~~~~~G~N~rm~ei~Aaig~~qL~~l~--~~i~~r~~i~  245 (374)
T d1o69a_         170 NGNKIITTSG-G-GMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLE--QRVLKKREIY  245 (374)
T ss_dssp             CTTSSSCCSS-C-EEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHH--HHHHHHHHHH
T ss_pred             cCcccccccc-c-eeehhhhHHHHHhhccccccccccccccccccCCccccccchhhhhhHHHHhhhh--hhcchhHHHH
Confidence               8887442 3 44554 57777655321              011223456666666666665443  3455555566


Q ss_pred             HHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCC------------------ChhhHHHHHHHHHHCCceeccCC---
Q 021893          191 EELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTA------------------LPVSAYDICLKMKERGILAKPTH---  249 (306)
Q Consensus       191 ~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~------------------~~~~~~~~~~~l~~~Gi~~~~~~---  249 (306)
                      +.+.+.|.......+ ..........+..+.+..+.                  .......+.+.|.++||.+++..   
T Consensus       246 ~~y~~~L~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~gI~~r~~y~pl  324 (374)
T d1o69a_         246 EWYKEFLGEYFSFLD-ELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAM  324 (374)
T ss_dssp             HHHHHHHTTTEECCC-CCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCG
T ss_pred             HHHHhhccccccccc-cccCCCCChhheeeeeccccccccccccccccchhhccchhhHHHHHHHHHHCCCCEEEeCcch
Confidence            666666654321111 11111111111122121100                  12345679999999999876421   


Q ss_pred             ---------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          250 ---------------------DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       250 ---------------------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                           ...|.+=.+...|++|++..++.|.++++
T Consensus       325 ~~~~~~~~~~~~~~pna~~~~~~~i~LP~~~~lt~~di~~I~~~I~~~lk  374 (374)
T d1o69a_         325 HTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIK  374 (374)
T ss_dssp             GGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred             hhChhhhcCCCCCCHHHHHHHhCEEECcCCCCCCHHHHHHHHHHHHHHHC
Confidence                                 12343333445699999999999998764

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=98.85  E-value=1.6e-08  Score=88.68  Aligned_cols=215  Identities=15%  Similarity=0.146  Sum_probs=123.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |++.+++.+.   +++++|++.+..+   ...+    +++|.++|+++++++|.|.+|+ |--..|..  ...++ ...+
T Consensus       111 d~~~~~~~i~---~~tk~i~~~~~~g---~~~d----~~~i~~~~~~~~i~lieD~a~a~ga~~~g~~--~g~~g-~~~~  177 (384)
T d1b9ha_         111 DPEAVAAAVT---PRTKVIMPVHMAG---LMAD----MDALAKISADTGVPLLQDAAHAHGARWQGKR--VGELD-SIAT  177 (384)
T ss_dssp             CHHHHHHHCC---TTEEEECCBCGGG---CCCC----HHHHHHHHHHHTCCBCEECTTCTTCEETTEE--GGGSS-SCEE
T ss_pred             chhhhccccc---ccccccccccccc---cccc----cccchhhhhhhhhhhhhhhceecccccCCEe--cCccc-ccce
Confidence            7899998887   6899988776654   3455    9999999999999999999997 22122322  12222 2344


Q ss_pred             EEe--cccccCCcccceeeEe-CHHHHhhcCCC-----------------CccCCCCCCHHHHHHHHHHHHHHhhccHHH
Q 021893          125 VIL--GKALGGGVIPVSAVLA-DKEVMLCIQPG-----------------EHGSTFGGNPLASAVAIASLDVIRDEKLAE  184 (306)
Q Consensus       125 ~s~--sK~~~~G~~~~g~~~~-~~~~~~~~~~~-----------------~~~~~~~~~~~~~~aa~~al~~~~~~~~~~  184 (306)
                      +||  +|.++.|-  -|+++. ++++.+.++..                 ..+..+..+.+.++.+...|+.+  ++..+
T Consensus       178 ~Sf~~~K~i~~g~--GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~n~rms~l~Aaig~~qL~~l--d~~~~  253 (384)
T d1b9ha_         178 FSFQNGKLMTAGE--GGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARL--DEQIA  253 (384)
T ss_dssp             EECCTTSSSCSSS--CEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTH--HHHHH
T ss_pred             ecccccccccccc--cchhhhhhHHHHHHHHHHHhcCCCCccccccccccccccccccccchhhhhhhhhhhc--ccchh
Confidence            555  38887543  344555 46555443211                 01122334566655566655544  33455


Q ss_pred             HHHHHHHHHHHHHHHHHhhCC-CceeeE-EEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC-------------
Q 021893          185 RSAHLGEELRQHLFKIQQQFP-NYVKEV-RGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH-------------  249 (306)
Q Consensus       185 ~~~~~~~~l~~~L~~~~~~~~-~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-------------  249 (306)
                      +.+++.+++.+.|.......+ ...... .....+..+.++.. ....-.+|.+.|.++||.+++..             
T Consensus       254 ~R~~~~~~y~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Rd~l~~~L~~~GI~~~~~y~plh~~~~~~~~~  332 (384)
T d1b9ha_         254 VRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGL-TEERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELG  332 (384)
T ss_dssp             HHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTC-CHHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSS
T ss_pred             hhhhhhhhhhhhhhcccccccccccccccccccccccceeccc-ccccHHHHHHHHHHCCCCeeeeCcchhcCHHHHhcC
Confidence            555666666666655321100 000011 11122233333321 12334579999999999875321             


Q ss_pred             --------------------CCEEEEeCCCCCC-HHHHHHHHHHHHHHHh
Q 021893          250 --------------------DTIVRLTPPLSIS-SNELQEGSKALHDVLE  278 (306)
Q Consensus       250 --------------------~~~lRi~~~~~~t-~~~i~~~~~~l~~~l~  278 (306)
                                          ...|.+=.+...| ++|++..++.|++++.
T Consensus       333 ~~~~~~~~~~~~~Pna~~l~~~~l~LP~~~~Lt~e~ei~~I~~~i~~~l~  382 (384)
T d1b9ha_         333 APDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVA  382 (384)
T ss_dssp             CCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHH
T ss_pred             CCcccccccccCCHHHHHHHhCEEEccCCCCCCCHHHHHHHHHHHHHHHh
Confidence                                1345554444455 6799999999999887

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=98.84  E-value=1.1e-08  Score=89.24  Aligned_cols=210  Identities=16%  Similarity=0.199  Sum_probs=121.5

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      +.+++++.+.   +++++|++.+..   |...+    +++|.++|+++|++||.|.+|+-    |..+.-...|..-|+.
T Consensus       109 ~~~~~~~~~~---~~t~avi~vh~~---G~~~~----~~~i~~~~~~~~i~lIEDaaqa~----Ga~~~~~~~G~~g~~~  174 (371)
T d2fnua1         109 DELALEKLIN---ERTKAIVSVDYA---GKSVE----VESVQKLCKKHSLSFLSDSSHAL----GSEYQNKKVGGFALAS  174 (371)
T ss_dssp             CGGGSGGGCC---TTEEEEEEECGG---GCCCC----HHHHHHHHHHHTCEEEEECTTCT----TCEETTEETTSSSSEE
T ss_pred             cchhhhhhcc---chhhcccccccc---ccccc----cccccccccccchhhccchhhcc----CceeccccCCcccccc
Confidence            3455555555   689999887765   45566    99999999999999999999981    1211112223333555


Q ss_pred             Eec----ccccCCcccceeeEe-CHHHHhhcCCCC----------------ccCCCCCCHHHHHHHHHHHHHHhhccHHH
Q 021893          126 ILG----KALGGGVIPVSAVLA-DKEVMLCIQPGE----------------HGSTFGGNPLASAVAIASLDVIRDEKLAE  184 (306)
Q Consensus       126 s~s----K~~~~G~~~~g~~~~-~~~~~~~~~~~~----------------~~~~~~~~~~~~~aa~~al~~~~~~~~~~  184 (306)
                      ++|    |.+++|-  -|.++. ++++.+.++...                .+..+..+.+.++.+...++.+  ++..+
T Consensus       175 ~~Sf~~~K~l~~g~--GG~i~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~G~n~r~sel~Aaigl~qL~~l--~~~~~  250 (371)
T d2fnua1         175 VFSFHAIKPITTAE--GGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKA--PFLMQ  250 (371)
T ss_dssp             EEECCTTSSSCCSS--CEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTH--HHHHH
T ss_pred             cccccccccccccc--ceEEEeechhhhhhcccccccccccccccccccccccccccccchhhhhhhhhhhhc--cchhh
Confidence            444    8887442  244555 466666554221                1122334556666666555443  22344


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCcee-----eEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceeccCC----------
Q 021893          185 RSAHLGEELRQHLFKIQQQFPNYVK-----EVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAKPTH----------  249 (306)
Q Consensus       185 ~~~~~~~~l~~~L~~~~~~~~~~~~-----~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~----------  249 (306)
                      +-+++.+++.+.|..    .+....     ........+++.+... ....-.++.+.|.++||.+++..          
T Consensus       251 ~R~~~~~~y~~~l~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~r~~~~~~L~~~gI~~~~~y~pl~~~~~~~  325 (371)
T d2fnua1         251 KREEAALTYDRIFKD----NPYFTPLHPLLKDKSSNHLYPILMHQK-FFTCKKLILESLHKRGILAQVHYKPIYQYQLYQ  325 (371)
T ss_dssp             HHHHHHHHHHHHHTT----CSSEEESGGGCSSCCCCSCEEEEECGG-GGGGHHHHHHHHHHTTEECBCCCCCGGGSHHHH
T ss_pred             hhhhhhhhhcccccc----ccccccccccccccccccccccccccc-chhHHHHHHHHHHHCCCCcceeCcccccCHHHH
Confidence            444455555444443    221111     1112223334444431 12235679999999999876420          


Q ss_pred             ---------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 021893          250 ---------------DTIVRLTPPLSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       250 ---------------~~~lRi~~~~~~t~~~i~~~~~~l~~~l~  278 (306)
                                     ...+.+=.+...+++|+++.++.|.+.++
T Consensus       326 ~~~~~~~~pnae~~~~~~l~LP~~~~lt~~di~~I~~~i~~~~~  369 (371)
T d2fnua1         326 QLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFE  369 (371)
T ss_dssp             HHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred             hccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHHHHHHHHHH
Confidence                           14555543456799999999999999887

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=98.83  E-value=6.5e-08  Score=84.94  Aligned_cols=214  Identities=14%  Similarity=0.125  Sum_probs=133.9

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |.++++++.++.  ++++|++-....+  ...+    +++++++|++.|.+|++|-+|. |+...|. +..+ +.. .|+
T Consensus       164 Dyd~~~~~a~~~--kPklIi~G~S~y~--r~~d----~~~~reIad~vga~l~~D~aH~aGLIA~g~-~~sP-~~~-aDv  232 (463)
T d2a7va1         164 DYNQLALTARLF--RPRLIIAGTSAYA--RLID----YARMREVCDEVKAHLLADMAHISGLVAAKV-IPSP-FKH-ADI  232 (463)
T ss_dssp             CHHHHHHHHHHH--CCSEEEECCSSCC--SCCC----HHHHHHHHHHTTCEEEEECGGGHHHHHTTS-SCCG-GGT-CSE
T ss_pred             cHHHHHHHHhhc--CCceEEecccccc--cccC----HHHHHHHhhcccceEEechhhhhHHhhhhh-hcCh-hhh-hhh
Confidence            899999999985  6777777554332  3456    9999999999999999999997 6643333 3222 232 477


Q ss_pred             EEec--ccccCCcccceeeEeCH---------------HHHhhcCCCCccCCCCC-CHHHHHHHHHHHHHHhh---ccHH
Q 021893          125 VILG--KALGGGVIPVSAVLADK---------------EVMLCIQPGEHGSTFGG-NPLASAVAIASLDVIRD---EKLA  183 (306)
Q Consensus       125 ~s~s--K~~~~G~~~~g~~~~~~---------------~~~~~~~~~~~~~~~~~-~~~~~~aa~~al~~~~~---~~~~  183 (306)
                      ++.|  |.|.|.  |-|.+..++               ++.+++......+...+ ..-.+++...++..+.+   .++.
T Consensus       233 vt~tTHKTlrGP--rgGiIl~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~h~iAa~Ava~~ea~~~~fk~Ya  310 (463)
T d2a7va1         233 VTTTTHKTLRGA--RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYS  310 (463)
T ss_dssp             EEEESSGGGCSC--SCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred             hhchhhhhhcCC--CceEEEEcccccccccccCccchhHHHHHhhhhcCcccchhhhhhhHHHHHHHHHHhcCchHHHHH
Confidence            7555  999743  566677765               22333322111111112 22233333344444433   3467


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----c-----CCCCEEE
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----P-----THDTIVR  254 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----~-----~~~~~lR  254 (306)
                      +++.++.+.|.+.|.+.+..    +..-.-...++.+++.+  .+.+.....+.|-+.||.+-    |     ..+..||
T Consensus       311 ~qVv~NAk~La~~L~~~G~~----vv~ggTdnHlvlvdl~~--~~~~G~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiR  384 (463)
T d2a7va1         311 LQVLKNARAMADALLERGYS----LVSGGTDNHLVLVDLRP--KGLDGARAERVLELVSITANKNTCPGDRSAITPGGLR  384 (463)
T ss_dssp             HHHHHHHHHHHHHHHHTTCE----EGGGSCSSSEEEEECTT--TTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEE
T ss_pred             HHHHHHHHHHHHHHHhCCCe----eecCCCCCceeeeeccc--cCCCHHHHHHHHHhccCccCCccCCCCCCCCCCCceE
Confidence            78888888888888876422    11112244555666643  23567777888888898876    2     2345699


Q ss_pred             EeCC----CCCCHHHHHHHHHHHHHHHh
Q 021893          255 LTPP----LSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       255 i~~~----~~~t~~~i~~~~~~l~~~l~  278 (306)
                      |..+    ....++|+.++.+.|.+++.
T Consensus       385 iGT~a~TtrG~~e~dm~~iA~~I~~~l~  412 (463)
T d2a7va1         385 LGAPALTSRQFREDDFRRVVDFIDEGVN  412 (463)
T ss_dssp             EESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             eCCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            9865    34677899998888888775

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=98.76  E-value=2e-07  Score=83.08  Aligned_cols=218  Identities=16%  Similarity=0.133  Sum_probs=138.2

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhhcccccccccccccCCCCCcEE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMV  125 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~g~~~~g~~~~~~~~~~~~d~~  125 (306)
                      |.+.+++...   ++++++++..+++.+.....    .+++.+++++.+..+++|-+.-.. -.+ ..  ...+...|++
T Consensus       191 ~~~~~~~~~~---~~~a~v~v~~p~~~g~~e~~----~~~~~~~~h~~g~~~~~~~~~~~~-~~~-l~--~p~~~g~div  259 (471)
T d1wyub1         191 DLEALKRELG---PHVAALMLTNPNTLGLFERR----ILEISRLCKEAGVQLYYDGANLNA-IMG-WA--RPGDMGFDVV  259 (471)
T ss_dssp             CHHHHHHHCS---TTEEEEEECSSCTTSCCCTT----HHHHHHHHHHHTCEEEEEGGGGGG-TTT-TC--CHHHHTCSEE
T ss_pred             cchhhhhhhh---ccccceeeccCCCcccccch----hhhhHHHHHhccccccccccchhh-hhh-cc--ccCccccccc
Confidence            5666665554   67888888888777654434    889999999999988888654311 000 01  1111122433


Q ss_pred             --Eeccccc-----CCcccceeeEeCHHHHhhcCCC----------------C---ccCCCCCCHHHHHHHHHHHHHHhh
Q 021893          126 --ILGKALG-----GGVIPVSAVLADKEVMLCIQPG----------------E---HGSTFGGNPLASAVAIASLDVIRD  179 (306)
Q Consensus       126 --s~sK~~~-----~G~~~~g~~~~~~~~~~~~~~~----------------~---~~~~~~~~~~~~~aa~~al~~~~~  179 (306)
                        ..++.+|     ||. .+|++..+++++..+-..                +   .....+++.+...++...+..+..
T Consensus       260 ~vg~~q~~G~P~~~GGP-~~G~~a~~~~~~R~~PGRiV~~~~~~~~~~~~REqhIrRe~actnqaL~al~A~vYlsllG~  338 (471)
T d1wyub1         260 HLNLHKTFTVPHGGGGP-GSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGL  338 (471)
T ss_dssp             ECCTTTTTCCCCTTSCC-CCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccc-cccceeehhhhhccCCCceecCCCccccccCCCcccccchhhhhhhHHHHHHHHHHHHHhCc
Confidence              2345554     676 789999999987766422                1   111123456666666667777766


Q ss_pred             cc---HHHHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----cC-CCC
Q 021893          180 EK---LAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----PT-HDT  251 (306)
Q Consensus       180 ~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~-~~~  251 (306)
                      ++   +.+....+..+++++|+..+..     . ......+--+.+.. +.+....++.+.|+++|++-.    |. ..+
T Consensus       339 ~GL~elA~~~~~~A~Yla~~L~~~G~~-----~-~~~~~ff~EFvv~~-~~~~~~~~i~k~L~~~G~~~~~~~~p~~~~~  411 (471)
T d1wyub1         339 EGLKKAAALAVLNARYLKELLKEKGYR-----V-PYDGPSMHEFVAQP-PEGFRALDLAKGLLELGFHPPTVYFPLIVKE  411 (471)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCB-----C-SSCSSCCSCEEEBC-STTCCHHHHHHHHHHTTCCCCEESCSTTSTT
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcCce-----e-ccCcceeeEEeecC-CCCCCHHHHHHHHHHcCCCCCcccCcCCCCC
Confidence            44   5667778888999888653211     1 11111222232221 124567789999999998643    22 356


Q ss_pred             EEEEeCCCCCCHHHHHHHHHHHHHHHhhhcCC
Q 021893          252 IVRLTPPLSISSNELQEGSKALHDVLELDLPK  283 (306)
Q Consensus       252 ~lRi~~~~~~t~~~i~~~~~~l~~~l~~~~~~  283 (306)
                      .+.+++.=.+|++|||.++++|+++++ +.++
T Consensus       412 ~llv~vTE~~tkedID~lv~aL~~i~~-e~~~  442 (471)
T d1wyub1         412 ALMVEPTETEAKETLEAFAEAMGALLK-KPKE  442 (471)
T ss_dssp             CEEECCCTTSCHHHHHHHHHHHHHHHT-SCHH
T ss_pred             eEEEecCCCCCHHHHHHHHHHHHHHHH-hhHH
Confidence            788998778999999999999999999 7643

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.75  E-value=1.3e-07  Score=83.32  Aligned_cols=214  Identities=15%  Similarity=0.130  Sum_probs=133.3

Q ss_pred             CHHHHHHHHHhcCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHHcCCEEEEehhhh-cccccccccccccCCCCCcE
Q 021893           46 DITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQS-GLARSGRMLASDWEEVRPDM  124 (306)
Q Consensus        46 d~~~le~~i~~~~~~~~~v~v~~~~~~~G~~~~~~~~l~~i~~l~~~~gi~li~De~~~-g~~~~g~~~~~~~~~~~~d~  124 (306)
                      |.++++++.++.  ++++|++-.-..+  ...+    .++++++|++.|.+|++|-+|. |+...|. +..+ +.. .|+
T Consensus       168 Dyd~l~~~a~~~--kPklIi~G~S~y~--r~~d----~~~~reIad~vga~l~~D~aH~aGLIA~g~-~~sP-l~~-aDv  236 (470)
T d1rv3a_         168 DYDRLEENARLF--HPKLIIAGTSCYS--RNLD----YGRLRKIADENGAYLMADMAHISGLVVAGV-VPSP-FEH-CHV  236 (470)
T ss_dssp             CHHHHHHHHHHH--CCSEEEECCSSCC--SCCC----HHHHHHHHHHTTCEEEEECTTTHHHHHHTS-SCCG-GGT-CSE
T ss_pred             cHHHHHHHHHhh--CcceEeechhhcc--ccCC----HHHHHHHHhccCCeEEecchhhhhhccccc-cCCh-hhe-eee
Confidence            789999999875  6777877554332  3456    9999999999999999999997 6643333 2222 222 377


Q ss_pred             EEec--ccccCCcccceeeEeCHH---------------HHhhcCCCCccCCCCC-CHHHHHHHHHHHHHHhh---ccHH
Q 021893          125 VILG--KALGGGVIPVSAVLADKE---------------VMLCIQPGEHGSTFGG-NPLASAVAIASLDVIRD---EKLA  183 (306)
Q Consensus       125 ~s~s--K~~~~G~~~~g~~~~~~~---------------~~~~~~~~~~~~~~~~-~~~~~~aa~~al~~~~~---~~~~  183 (306)
                      ++.|  |.|.|.  |-|.+..+++               +.+++.....-+...+ ..-.+++...++..+.+   .++.
T Consensus       237 vt~tTHKtlrGP--rgGiI~~~~~~~~~~~~~~~~~~~~~~~~i~~avFPg~qggph~~~IAa~Ava~~ea~~~~fk~Ya  314 (470)
T d1rv3a_         237 VTTTTHKTLRGC--RAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQ  314 (470)
T ss_dssp             EEEESSGGGCCC--SCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred             eeeehhhhccCC--cceEEEEccccccccccccchhHHHHHHHHhhhcCccccccchhhHHHHHHHHHHHhcChHHHHHH
Confidence            7555  999743  5566777543               3333332111111122 22233333355555543   3366


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeEEEeeeEEEEEEecCCChhhHHHHHHHHHHCCceec----cC-----CCCEEE
Q 021893          184 ERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILAK----PT-----HDTIVR  254 (306)
Q Consensus       184 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~~~----~~-----~~~~lR  254 (306)
                      +++.++.+.|.+.|.+.+..    +..-.-...++.+++.+.  +.+..+..+.|.+.||.+-    |+     .+..||
T Consensus       315 ~qvv~NAk~La~~L~~~G~~----v~~ggTdnHlvlvdl~~~--g~~g~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiR  388 (470)
T d1rv3a_         315 RQVVANCRALSAALVELGYK----IVTGGSDNHLILVDLRSK--GTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLR  388 (470)
T ss_dssp             HHHHHHHHHHHHHHHHTTCE----EGGGSCSSSEEEEEGGGG--TCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEE
T ss_pred             HHHHHHHHHHHHHHHhCCce----eccCCCCCceEEEeeccc--CCcHHHHHHHHHHcCcEECCCcCCCCCCCCCCCeeE
Confidence            77777788888777776422    111122455667766542  3456667777777898875    22     245799


Q ss_pred             EeCC----CCCCHHHHHHHHHHHHHHHh
Q 021893          255 LTPP----LSISSNELQEGSKALHDVLE  278 (306)
Q Consensus       255 i~~~----~~~t~~~i~~~~~~l~~~l~  278 (306)
                      |..+    ....++|+.++.+.|.++++
T Consensus       389 iGT~alTtrG~~e~dm~~iA~~I~~~l~  416 (470)
T d1rv3a_         389 LGTPALTSRGLLEKDFQKVAHFIHRGIE  416 (470)
T ss_dssp             EECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             ecCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            9865    35678999999999988875