Citrus Sinensis ID: 022002
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 304 | ||||||
| 118489441 | 332 | unknown [Populus trichocarpa x Populus d | 1.0 | 0.915 | 0.626 | 1e-117 | |
| 296089209 | 433 | unnamed protein product [Vitis vinifera] | 1.0 | 0.702 | 0.638 | 1e-117 | |
| 359489458 | 332 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 0.915 | 0.638 | 1e-116 | |
| 356496330 | 343 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 0.886 | 0.590 | 1e-101 | |
| 255541184 | 342 | conserved hypothetical protein [Ricinus | 0.986 | 0.877 | 0.603 | 1e-100 | |
| 449469343 | 344 | PREDICTED: uncharacterized protein LOC10 | 0.845 | 0.747 | 0.569 | 6e-94 | |
| 357469915 | 344 | hypothetical protein MTR_4g027070 [Medic | 0.865 | 0.764 | 0.599 | 7e-93 | |
| 42572745 | 404 | uncharacterized protein [Arabidopsis tha | 0.822 | 0.618 | 0.541 | 2e-84 | |
| 42570499 | 329 | uncharacterized protein [Arabidopsis tha | 0.819 | 0.756 | 0.543 | 8e-84 | |
| 30695235 | 236 | uncharacterized protein [Arabidopsis tha | 0.634 | 0.817 | 0.602 | 2e-72 |
| >gi|118489441|gb|ABK96523.1| unknown [Populus trichocarpa x Populus deltoides] | Back alignment and taxonomy information |
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Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/332 (62%), Positives = 249/332 (75%), Gaps = 28/332 (8%)
Query: 1 MASLAQAPSAMSTVGVLWTLPRSMRLVNFKSVIPVVTSPCTHVKHSPLCCTKLTPWEPSP 60
MASL +AP MST+ R ++L++ ++ + P HV H+ +CC KLTPWEPSP
Sbjct: 1 MASLVKAPPTMSTINAHQVHLRKLKLLSNLNMHHGLRFPRIHVNHTTVCCAKLTPWEPSP 60
Query: 61 ASHAPTDDADYKILNKNSNIFETLSSDNTAEAPATKTEEVTDANNQPLVQLQFLKWPMWL 120
++APT DA +L K SNIFETL S++TAEAPAT +EE+TD N+ LVQ QFLKWPMWL
Sbjct: 61 VTYAPTIDASGNLLKKTSNIFETLKSEDTAEAPATNSEELTDTKNRSLVQFQFLKWPMWL 120
Query: 121 LGPCILL----------------------------GTDCIFNIGATLFLLMADSCARSKN 152
LGP +LL G DCIFN+GATLFLLMADSC+RSKN
Sbjct: 121 LGPSLLLTTGMVPTLWLPLSSVFLGPNIASLLSLIGLDCIFNLGATLFLLMADSCSRSKN 180
Query: 153 TTRACNSKPPFSYKFWNMVANTTGFIIPLLMLFGSQKGFLQPQLPFIPFAVLLGPYLLLL 212
+ CNSKPP SYKFWN+VA +GF+IPL+ L GSQKG L PQLPFIPFAVLLGPY+LLL
Sbjct: 181 QAQTCNSKPPLSYKFWNVVATVSGFVIPLMALLGSQKGTLLPQLPFIPFAVLLGPYMLLL 240
Query: 213 SIQILTEMLTWHWQSPVWLVTPVVYESYRVLQLMRGLKLGAELSAPAWIVHTVRGLVCWW 272
S+QILTE+LTWHWQSPVWLVTPVVYESYR+LQLMRGLKLGAELSAP W++H +RGLV WW
Sbjct: 241 SVQILTELLTWHWQSPVWLVTPVVYESYRLLQLMRGLKLGAELSAPTWMLHMIRGLVSWW 300
Query: 273 ILILGVQLMRVAWFAGFTSQARRQQSPASADG 304
ILILGVQLM VAWFAGF +++++Q SPA++ G
Sbjct: 301 ILILGVQLMSVAWFAGFAARSQQQHSPAASGG 332
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Source: Populus trichocarpa x Populus deltoides Species: Populus trichocarpa x Populus deltoides Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296089209|emb|CBI38912.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359489458|ref|XP_003633924.1| PREDICTED: uncharacterized protein LOC100854105 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356496330|ref|XP_003517021.1| PREDICTED: uncharacterized protein LOC100779126 [Glycine max] | Back alignment and taxonomy information |
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| >gi|255541184|ref|XP_002511656.1| conserved hypothetical protein [Ricinus communis] gi|223548836|gb|EEF50325.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|449469343|ref|XP_004152380.1| PREDICTED: uncharacterized protein LOC101219687 [Cucumis sativus] gi|449528182|ref|XP_004171085.1| PREDICTED: uncharacterized LOC101219687 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|357469915|ref|XP_003605242.1| hypothetical protein MTR_4g027070 [Medicago truncatula] gi|355506297|gb|AES87439.1| hypothetical protein MTR_4g027070 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|42572745|ref|NP_974468.1| uncharacterized protein [Arabidopsis thaliana] gi|332646561|gb|AEE80082.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|42570499|ref|NP_850729.2| uncharacterized protein [Arabidopsis thaliana] gi|7288007|emb|CAB81845.1| putative protein [Arabidopsis thaliana] gi|332646563|gb|AEE80084.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|30695235|ref|NP_191618.2| uncharacterized protein [Arabidopsis thaliana] gi|186511244|ref|NP_001118866.1| uncharacterized protein [Arabidopsis thaliana] gi|332646562|gb|AEE80083.1| uncharacterized protein [Arabidopsis thaliana] gi|332646564|gb|AEE80085.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 304 | ||||||
| TAIR|locus:2103326 | 404 | AT3G60590 [Arabidopsis thalian | 0.578 | 0.435 | 0.687 | 8.2e-85 |
| TAIR|locus:2103326 AT3G60590 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 695 (249.7 bits), Expect = 8.2e-85, Sum P(2) = 8.2e-85
Identities = 123/179 (68%), Positives = 150/179 (83%)
Query: 126 LLGTDCIFNIGATLFLLMADSCARSKNTTRACNSKPPFSYKFWNMVANTTGFIIPLLMLF 185
L+G DCIFN+GATLFLLMADSCAR K+ +++CNSKPPFSYKFWNM + GF++P+L+LF
Sbjct: 222 LIGLDCIFNLGATLFLLMADSCARPKDPSQSCNSKPPFSYKFWNMFSLIIGFLVPMLLLF 281
Query: 186 GSQKGFL---QPQLPFIPFAVLLGPYLLLLSIQILTEMLTWHWQSPVWLVTPVVYESYRV 242
GSQ G L QPQ+PF+ AV+L PY +LL++Q LTE+LTWHWQSPVWLVTPVVYE+YR+
Sbjct: 282 GSQSGLLASLQPQIPFLSSAVILFPYFILLAVQTLTEILTWHWQSPVWLVTPVVYEAYRI 341
Query: 243 LQLMRGLKLGAELSAPAWIVHTVRGLVCWWILILGVQLMRVAWFAGFTSQARRQQSPAS 301
LQLMRGL L AE++AP W+VH +RGLV WW+LILG+QLMRVAWFAGF S+ Q P S
Sbjct: 342 LQLMRGLTLSAEVNAPVWVVHMLRGLVSWWVLILGMQLMRVAWFAGFASRTTTGQQPQS 400
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00