Citrus Sinensis ID: 022015

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300----
Protein Sequence
MLPASSSLSSLSNSLTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEVKLTDLLTCCDSMELIVQRFLLIF
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHccccccccccEEEEEccccccEEEcccEEcEEEEEEEEEcccccccccEEEEEEEcccccccccEEEEEEccEEEEEEEEEEcccEEEEEEcccccHHHHHHHHccEEEEEcccHHHHHHHHHHHHccccccccccccccHHHHHHHHcccEEEccccccccccccccccccEEEEEEcccccccHHHHHHHHcccccccEEEEEEcccccEEEEEcccccccEEEccccccccHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHHHHHHHHHHccccccccccccHHccHccccHHHHHHHHHHHHcHHHHcHHHHEEcccccccEEEEccEEcccEEEEEEEcccccccccEEEEEEEcccccccHccEEEEEcccEEEEEEEEEccccEEEEcccccHHHHHHHHHccEEEEEccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccccccccccEEEccHHHcccccEEEEEEEcccccccHHHHHHHcccccccEEEEEEcccccEEEEEcccccccEEHccHHHcccHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
mlpassslsslsNSLTLLLLICTLLltspsnalkypfhprdilpvlprqvswpiLNALNGAadllpafvgsasdqtgtvewkgacfyqnqawmefhnksgsefgggtlhikvsdahswtcMDLYvfatpyrvtwDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVfplftntgwgensnigflkkhmgasfeqrpepwftnvtveeihsgdflAVSKirgrwggfetLEKWVTGAYAGHTAVCLrdsegklwvgesghendevkltdlltccDSMELIVQRFLLIF
Flexible Loop (DISEMBL)
mlpassslsSLSNSLTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGesghendevKLTDLLTCCDSMELIVQRFLLIF
Low Complexity Region (SEG)
MLPAssslsslsnsltllllictllltspsNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEVKLTDLLTCCDSMELIVQRFLLIF
Disordered region (IsUnstruct)
*************SLTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEVKLTDLLTCCDSMELIVQRFLLI*
Disordered Region (DISOPRED)
************NSLTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHN***SEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEVKLTDLLTCCDSMELIVQRFLLIF
Disordered Region (DISEMBL)
***********SNSLTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEVKLTDLLTCCDSMELIVQRFLLIF
Disordered Region (DISPRO)
******SLSSLSNSLTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEVKLTDLLTCCDSMELIVQRFLLIF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLPASSSLSSLSNSLTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEVKLTDLLTCCDSMELIVQRFLLIF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	304
255563941	524	conserved hypothetical protein [Ricinus	0.878	0.509	0.794	1e-129
224115304	526	predicted protein [Populus trichocarpa]	0.888	0.513	0.800	1e-128
225461019	531	PREDICTED: uncharacterized protein LOC10	0.917	0.525	0.768	1e-127
224124332	526	predicted protein [Populus trichocarpa]	0.871	0.503	0.782	1e-125
357494401	525	hypothetical protein MTR_5g092140 [Medic	0.898	0.52	0.725	1e-122
356501509	519	PREDICTED: uncharacterized protein LOC10	0.819	0.479	0.803	1e-122
297799288	522	hypothetical protein ARALYDRAFT_913846 [	0.822	0.478	0.8	1e-122
356553265	525	PREDICTED: uncharacterized protein LOC10	0.819	0.474	0.803	1e-121
388506450	354	unknown [Medicago truncatula]	0.901	0.774	0.706	1e-121
15236947	523	uncharacterized protein [Arabidopsis tha	0.812	0.472	0.801	1e-120

>gi|255563941|ref|XP_002522970.1| conserved hypothetical protein [Ricinus communis] gi|223537782|gb|EEF39400.1| conserved hypothetical protein [Ricinus communis]

 Score =  465 bits (1197), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 213/268 (79%), Positives = 245/268 (91%), Gaps = 1/268 (0%)

Query: 14  SLTLLLLIC-TLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSA 72
           SLT++L+I  +  + +  +A++ PFHP+D+LP+LPRQVSWPILN LN A DLLP FVG+A
Sbjct: 6   SLTIILIISFSFSIFAAISAVEVPFHPQDLLPLLPRQVSWPILNRLNSAVDLLPTFVGAA 65

Query: 73  SDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRV 132
           +    T EWKGACFY+N AWMEFHNK+GS+FGGGTLHIK+S+AHSWTCMDLYVFATPYRV
Sbjct: 66  NSLNNTAEWKGACFYKNTAWMEFHNKTGSQFGGGTLHIKISNAHSWTCMDLYVFATPYRV 125

Query: 133 TWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGW 192
           TWDYYFLS EHTLEF EWEGK EYEYVKN+GVSIFLMQAGMLGTL+ALWDVFPLFTNTGW
Sbjct: 126 TWDYYFLSWEHTLEFKEWEGKAEYEYVKNRGVSIFLMQAGMLGTLQALWDVFPLFTNTGW 185

Query: 193 GENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTG 252
           GENSNIGFL+KHMGA+FE+RP+PW TN+T ++IHSGDFLA+SKIRGRWGGFETLEKWV+G
Sbjct: 186 GENSNIGFLEKHMGATFEERPQPWVTNITTDDIHSGDFLAISKIRGRWGGFETLEKWVSG 245

Query: 253 AYAGHTAVCLRDSEGKLWVGESGHENDE 280
           AYAGHTAVCLRDSEGKLWVGESGHEN++
Sbjct: 246 AYAGHTAVCLRDSEGKLWVGESGHENEQ 273

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115304|ref|XP_002316997.1| predicted protein [Populus trichocarpa] gi|222860062|gb|EEE97609.1| predicted protein [Populus trichocarpa]

 Score =  463 bits (1192), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 217/271 (80%), Positives = 243/271 (89%), Gaps = 1/271 (0%)

Query: 10  SLSNSLTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFV 69
           SL   LT+ L +  L   S S A+K PFHP+D+LP+LPRQVSWPILN LNGAADLLP FV
Sbjct: 6   SLKTILTISLFLFFLTPQS-SLAIKVPFHPQDLLPLLPRQVSWPILNYLNGAADLLPTFV 64

Query: 70  GSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATP 129
           G+AS    T EWKGACFY+N+AWMEFHNK+GSEFGGGTLH+KVS AHSWTCMD+YVFATP
Sbjct: 65  GAASALNDTGEWKGACFYENRAWMEFHNKTGSEFGGGTLHLKVSKAHSWTCMDIYVFATP 124

Query: 130 YRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTN 189
           YRVTWDYYFLSREHTLEF EW+ K EYEYVK +GVSIFLMQAGMLGTL ALWDVFPLFTN
Sbjct: 125 YRVTWDYYFLSREHTLEFKEWDSKAEYEYVKRQGVSIFLMQAGMLGTLSALWDVFPLFTN 184

Query: 190 TGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKW 249
           TGWGENSNIGFLKKHMGA+FEQRP+PW  N++V++IHSGDFLA+SKIRGRWGGFETLEKW
Sbjct: 185 TGWGENSNIGFLKKHMGATFEQRPQPWVNNISVDDIHSGDFLAISKIRGRWGGFETLEKW 244

Query: 250 VTGAYAGHTAVCLRDSEGKLWVGESGHENDE 280
           V+GAYAGH+AVCL+DSEGKLWVGESGHEN++
Sbjct: 245 VSGAYAGHSAVCLKDSEGKLWVGESGHENEQ 275

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461019|ref|XP_002280959.1| PREDICTED: uncharacterized protein LOC100267545 [Vitis vinifera] gi|297737413|emb|CBI26614.3| unnamed protein product [Vitis vinifera]

 Score =  459 bits (1182), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 216/281 (76%), Positives = 245/281 (87%), Gaps = 2/281 (0%)

Query: 1   MLPASSSLSSLSNS-LTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALN 59
           M P+S S   L  + L   LLI  L+   P +ALK P  PRDILP+LPRQ+SWPILN+L+
Sbjct: 1   MAPSSPSACLLQTTHLRTFLLISLLVFVPPIHALKPPIRPRDILPLLPRQLSWPILNSLH 60

Query: 60  GAADLLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWT 119
            A DLLP FVGSAS    TVEWKG CFY+ +AWMEF+NKSGSEFGGGTLHIKVS AHSWT
Sbjct: 61  SAVDLLPTFVGSAS-SNDTVEWKGTCFYETRAWMEFNNKSGSEFGGGTLHIKVSSAHSWT 119

Query: 120 CMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEA 179
           CMDLYVFATPY+VTWDYYFLSREHT+EFN WE K E+EYVKNKGVS+FLMQAGMLGTLEA
Sbjct: 120 CMDLYVFATPYQVTWDYYFLSREHTIEFNAWEEKAEFEYVKNKGVSVFLMQAGMLGTLEA 179

Query: 180 LWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGR 239
           LWDVFPLFTNTGWGEN+N+GFLKKHMGASF+ RP+PW TN++V+++HSGDFLA+SKIRGR
Sbjct: 180 LWDVFPLFTNTGWGENANLGFLKKHMGASFQTRPQPWVTNISVDDLHSGDFLAISKIRGR 239

Query: 240 WGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDE 280
           WGGFETLEKWVTG+YAGH+AVCLRDSEGKLWVGESGH N++
Sbjct: 240 WGGFETLEKWVTGSYAGHSAVCLRDSEGKLWVGESGHRNEK 280

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124332|ref|XP_002319305.1| predicted protein [Populus trichocarpa] gi|222857681|gb|EEE95228.1| predicted protein [Populus trichocarpa]

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 209/267 (78%), Positives = 240/267 (89%), Gaps = 2/267 (0%)

Query: 16  TLLLLICTLLLTSPSNAL--KYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSAS 73
           TLL +   L   +P ++L  K PFHP+D+LP+LPRQVSWPILN L+GA DLLP FVG+AS
Sbjct: 9   TLLTISLFLFFVTPQSSLAAKLPFHPQDLLPLLPRQVSWPILNRLHGAVDLLPTFVGAAS 68

Query: 74  DQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVT 133
               T +WKGACFY+N+AWMEFHNK+GSEFGGGTLH+KVS+AHSWTCMD+YVFATPYRVT
Sbjct: 69  ALNETGDWKGACFYENRAWMEFHNKTGSEFGGGTLHLKVSNAHSWTCMDIYVFATPYRVT 128

Query: 134 WDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWG 193
           WDYY LSREHTLEF EWE K EYEYVKN+GVSIFLM AGMLGTL+ALWDVFPLFTNTGWG
Sbjct: 129 WDYYLLSREHTLEFKEWESKAEYEYVKNRGVSIFLMHAGMLGTLQALWDVFPLFTNTGWG 188

Query: 194 ENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGA 253
           ENSNIGFL+KHMGA+FEQRP+PW TN++V++IHSGDFL +SKIRGRWGGFETLEKWV+GA
Sbjct: 189 ENSNIGFLEKHMGATFEQRPQPWATNISVDDIHSGDFLVISKIRGRWGGFETLEKWVSGA 248

Query: 254 YAGHTAVCLRDSEGKLWVGESGHENDE 280
           YAGH+AV LRDSEGKLWVGESG+EN++
Sbjct: 249 YAGHSAVFLRDSEGKLWVGESGNENEQ 275

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357494401|ref|XP_003617489.1| hypothetical protein MTR_5g092140 [Medicago truncatula] gi|355518824|gb|AET00448.1| hypothetical protein MTR_5g092140 [Medicago truncatula]

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 201/277 (72%), Positives = 241/277 (87%), Gaps = 4/277 (1%)

Query: 4   ASSSLSSLSNSLTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGAAD 63
           ASSS  +     TLL+ +  L  ++     K PFHPRD+LP++P+Q+SWPI+N+L+ A D
Sbjct: 2   ASSSKVAACAITTLLIFLTCLQFST----FKSPFHPRDLLPLMPKQISWPIINSLHSAVD 57

Query: 64  LLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDL 123
           +LP FV +AS    T EWKGACFY+NQAWMEFHNK+GS+FGGGTLH+KVS+AHS+TCMD+
Sbjct: 58  ILPVFVAAASSPNNTPEWKGACFYKNQAWMEFHNKTGSQFGGGTLHLKVSNAHSYTCMDI 117

Query: 124 YVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDV 183
           Y+FATPYRVTWDYYFLSREHTLE  EW+G+ EYEYVKN G+SIFLM+AGMLGTL+ALW+V
Sbjct: 118 YIFATPYRVTWDYYFLSREHTLEIKEWDGRAEYEYVKNHGLSIFLMKAGMLGTLQALWEV 177

Query: 184 FPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGF 243
           FPLFTNTGWGE SNIGF++KHMGASFE R +PW TN++V++IHSGDFLAVSKIRGRWG F
Sbjct: 178 FPLFTNTGWGEKSNIGFMEKHMGASFETRSQPWVTNISVDDIHSGDFLAVSKIRGRWGAF 237

Query: 244 ETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDE 280
           ETLEKWV+GAYAGHTAVCLRDS+GKLWVGESGHEN++
Sbjct: 238 ETLEKWVSGAYAGHTAVCLRDSDGKLWVGESGHENEK 274

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501509|ref|XP_003519567.1| PREDICTED: uncharacterized protein LOC100789468 [Glycine max]

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 200/249 (80%), Positives = 228/249 (91%)

Query: 32  ALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQA 91
           ALK PFHPRD+LP+LP+Q+SWPILN L+ A DLLP FVG+AS     ++WKGACFY+N+A
Sbjct: 20  ALKSPFHPRDVLPLLPKQLSWPILNRLHSAVDLLPVFVGAASSPDDNLKWKGACFYENKA 79

Query: 92  WMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWE 151
           WM FHNKSG++FGGGTLH+KVS+AHSWTCMDLY+FATPYRVTWDYYFL+REHTLE  EWE
Sbjct: 80  WMVFHNKSGTQFGGGTLHLKVSNAHSWTCMDLYIFATPYRVTWDYYFLAREHTLEIKEWE 139

Query: 152 GKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQ 211
           GK EYEYVKN G+SIFL+QAGMLGTL+ALW+VFPLFTNTGWGENSNI FL+KHMGASFE 
Sbjct: 140 GKAEYEYVKNHGLSIFLLQAGMLGTLQALWEVFPLFTNTGWGENSNIKFLEKHMGASFEV 199

Query: 212 RPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWV 271
           RP+PW TNV+ ++IHSGDFLAVSKIRGRWG FETLEKWV+GAYAGHTAVCLRDS GKLWV
Sbjct: 200 RPQPWVTNVSADDIHSGDFLAVSKIRGRWGAFETLEKWVSGAYAGHTAVCLRDSSGKLWV 259

Query: 272 GESGHENDE 280
           GESGHEN++
Sbjct: 260 GESGHENEK 268

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297799288|ref|XP_002867528.1| hypothetical protein ARALYDRAFT_913846 [Arabidopsis lyrata subsp. lyrata] gi|297313364|gb|EFH43787.1| hypothetical protein ARALYDRAFT_913846 [Arabidopsis lyrata subsp. lyrata]

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 200/250 (80%), Positives = 227/250 (90%)

Query: 31  NALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQ 90
           +++K PFHPRD+LP+LPRQVSWP+LN+LN A DLLP F+GSAS +   VEWKGACFY+N+
Sbjct: 22  SSVKLPFHPRDLLPLLPRQVSWPVLNSLNTAVDLLPTFIGSASVKNDAVEWKGACFYENK 81

Query: 91  AWMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEW 150
           AW+E +NKSGSEFGGGTLHIKV  AHSWTCMD+YVF TPYRVTWD+YF+SREHT+EF EW
Sbjct: 82  AWLELNNKSGSEFGGGTLHIKVDKAHSWTCMDIYVFVTPYRVTWDWYFVSREHTMEFKEW 141

Query: 151 EGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFE 210
           EGK EYEYVK KGVSIFLM+AGMLGTL ALWDVFPLFTNTGWGENSNI FLK HMGA+F 
Sbjct: 142 EGKAEYEYVKQKGVSIFLMEAGMLGTLRALWDVFPLFTNTGWGENSNIAFLKNHMGANFY 201

Query: 211 QRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLW 270
            RP+PW TN+T +EIHSGD LA+SKIRGRWGGFETLEKWV+GAYAGHTAVCLRDSEGKLW
Sbjct: 202 ARPKPWVTNITTDEIHSGDLLAISKIRGRWGGFETLEKWVSGAYAGHTAVCLRDSEGKLW 261

Query: 271 VGESGHENDE 280
           VGESG+EN++
Sbjct: 262 VGESGNENEK 271

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356553265|ref|XP_003544978.1| PREDICTED: uncharacterized protein LOC100796964 [Glycine max]

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 200/249 (80%), Positives = 228/249 (91%)

Query: 32  ALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQA 91
           ALK PFHPRD+LP+LPRQ+SWPILN L+ A DLLP FVG+A      ++WKGACFY+N+A
Sbjct: 26  ALKSPFHPRDVLPLLPRQLSWPILNRLHSAVDLLPVFVGAAFSPVDNLKWKGACFYENKA 85

Query: 92  WMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWE 151
           WM FHNKSG+++GGGTLHIKVS+AHSWTCMDLY+FA+PYRVTWDYYFL+REHTLE  EWE
Sbjct: 86  WMVFHNKSGTQYGGGTLHIKVSNAHSWTCMDLYIFASPYRVTWDYYFLAREHTLEIKEWE 145

Query: 152 GKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQ 211
           GK EYEYVKN G+SIFL+QAGMLGTLEALW+VFPLFTNTGWGENSNI FL+KHMGASFE 
Sbjct: 146 GKAEYEYVKNHGLSIFLLQAGMLGTLEALWEVFPLFTNTGWGENSNIKFLEKHMGASFEV 205

Query: 212 RPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWV 271
           RP+P+ TNV+V++IHSGDFLAVSKIRGRWG FETLEKWV+GAYAGHTAVCLRDS GKLWV
Sbjct: 206 RPQPFVTNVSVDDIHSGDFLAVSKIRGRWGAFETLEKWVSGAYAGHTAVCLRDSSGKLWV 265

Query: 272 GESGHENDE 280
           GESGHEN++
Sbjct: 266 GESGHENEK 274

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388506450|gb|AFK41291.1| unknown [Medicago truncatula]

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 197/279 (70%), Positives = 241/279 (86%), Gaps = 5/279 (1%)

Query: 2   LPASSSLSSLSNSLTLLLLICTLLLTSPSNALKYPFHPRDILPVLPRQVSWPILNALNGA 61
           + +SS +++ + +  L+ L C    T      K PFHPRD+LP++P+Q+SWPI+N+L+ A
Sbjct: 1   MASSSKVAACAITTLLIFLTCLQFST-----FKSPFHPRDLLPLMPKQISWPIINSLHSA 55

Query: 62  ADLLPAFVGSASDQTGTVEWKGACFYQNQAWMEFHNKSGSEFGGGTLHIKVSDAHSWTCM 121
            D+LP FV +AS    T EWKGACFY+NQAWMEFHNK+GS+FGGGTLH+KVS+AHS+TCM
Sbjct: 56  VDILPVFVAAASSPNNTPEWKGACFYKNQAWMEFHNKTGSQFGGGTLHLKVSNAHSYTCM 115

Query: 122 DLYVFATPYRVTWDYYFLSREHTLEFNEWEGKLEYEYVKNKGVSIFLMQAGMLGTLEALW 181
           D+Y+FATPYRVTWDYYFLSREHTLE  EW+G+ E+EYVKN G+SIFLM+AGMLGTL+ALW
Sbjct: 116 DIYIFATPYRVTWDYYFLSREHTLEIKEWDGRAEHEYVKNHGLSIFLMKAGMLGTLQALW 175

Query: 182 DVFPLFTNTGWGENSNIGFLKKHMGASFEQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWG 241
           +VFPLFTNTGWGE SNIGF++KHMGASFE R +PW TN++V++IHSGDFLAVSKIRGRWG
Sbjct: 176 EVFPLFTNTGWGEKSNIGFMEKHMGASFETRSQPWVTNISVDDIHSGDFLAVSKIRGRWG 235

Query: 242 GFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDE 280
            FETLEKWV+GAYAGHTAVCLRDS+GKLW GESGHEN++
Sbjct: 236 AFETLEKWVSGAYAGHTAVCLRDSDGKLWFGESGHENEK 274

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15236947|ref|NP_194432.1| uncharacterized protein [Arabidopsis thaliana] gi|4455225|emb|CAB36548.1| putative protein [Arabidopsis thaliana] gi|7269555|emb|CAB79557.1| putative protein [Arabidopsis thaliana] gi|18650639|gb|AAL75889.1| AT4g27020/F10M23_360 [Arabidopsis thaliana] gi|23505979|gb|AAN28849.1| At4g27020/F10M23_360 [Arabidopsis thaliana] gi|332659885|gb|AEE85285.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 198/247 (80%), Positives = 222/247 (89%)

Query: 34  KYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQAWM 93
           K PFHPRD+LP+ PRQVSWP++N+LN A DLLP F+GSAS +   VEWKGACFY+N+AW+
Sbjct: 26  KLPFHPRDLLPLFPRQVSWPVVNSLNTAVDLLPTFIGSASVRNDAVEWKGACFYENKAWL 85

Query: 94  EFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGK 153
           E +NKSGSEFGGGTLHIKV  AHSWTCMD+YVF TPYRVTWD+YF SREHT+EF EWEGK
Sbjct: 86  ELNNKSGSEFGGGTLHIKVDKAHSWTCMDIYVFVTPYRVTWDWYFASREHTMEFKEWEGK 145

Query: 154 LEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRP 213
            EYEYVK KGVSIFLM+AGMLGTL ALWDVFPLFTNTGWGENSNI FLK HMGA+F  RP
Sbjct: 146 AEYEYVKQKGVSIFLMEAGMLGTLRALWDVFPLFTNTGWGENSNIAFLKNHMGANFYPRP 205

Query: 214 EPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGE 273
           +PW TN+T +EIHSGD LA+SKIRGRWGGFETLEKWV+GAYAGHTAVCLRDSEGKLWVGE
Sbjct: 206 KPWVTNITTDEIHSGDLLAISKIRGRWGGFETLEKWVSGAYAGHTAVCLRDSEGKLWVGE 265

Query: 274 SGHENDE 280
           SG+EN++
Sbjct: 266 SGNENEK 272

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	304
TAIR|locus:2116347	523	AT4G27020 "AT4G27020" [Arabido	0.812	0.472	0.801	7.9e-117
TAIR|locus:2160165	531	AT5G54870 "AT5G54870" [Arabido	0.819	0.468	0.791	1.5e-115
TAIR|locus:2020553	523	AT1G70160 "AT1G70160" [Arabido	0.819	0.476	0.641	1.9e-92

TAIR|locus:2116347 AT4G27020 "AT4G27020" [Arabidopsis thaliana (taxid:3702)]

 Score = 1151 (410.2 bits), Expect = 7.9e-117, P = 7.9e-117
 Identities = 198/247 (80%), Positives = 222/247 (89%)

Query:    34 KYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQAWM 93
             K PFHPRD+LP+ PRQVSWP++N+LN A DLLP F+GSAS +   VEWKGACFY+N+AW+
Sbjct:    26 KLPFHPRDLLPLFPRQVSWPVVNSLNTAVDLLPTFIGSASVRNDAVEWKGACFYENKAWL 85

Query:    94 EFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWEGK 153
             E +NKSGSEFGGGTLHIKV  AHSWTCMD+YVF TPYRVTWD+YF SREHT+EF EWEGK
Sbjct:    86 ELNNKSGSEFGGGTLHIKVDKAHSWTCMDIYVFVTPYRVTWDWYFASREHTMEFKEWEGK 145

Query:   154 LEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQRP 213
              EYEYVK KGVSIFLM+AGMLGTL ALWDVFPLFTNTGWGENSNI FLK HMGA+F  RP
Sbjct:   146 AEYEYVKQKGVSIFLMEAGMLGTLRALWDVFPLFTNTGWGENSNIAFLKNHMGANFYPRP 205

Query:   214 EPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGE 273
             +PW TN+T +EIHSGD LA+SKIRGRWGGFETLEKWV+GAYAGHTAVCLRDSEGKLWVGE
Sbjct:   206 KPWVTNITTDEIHSGDLLAISKIRGRWGGFETLEKWVSGAYAGHTAVCLRDSEGKLWVGE 265

Query:   274 SGHENDE 280
             SG+EN++
Sbjct:   266 SGNENEK 272

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2160165 AT5G54870 "AT5G54870" [Arabidopsis thaliana (taxid:3702)]

 Score = 1139 (406.0 bits), Expect = 1.5e-115, P = 1.5e-115
 Identities = 197/249 (79%), Positives = 226/249 (90%)

Query:    32 ALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQA 91
             ++K PFHPRD+LP LPRQVSWPILN+L GAADLLP F+G+AS    +V+WKGACF++N A
Sbjct:    32 SVKSPFHPRDLLPHLPRQVSWPILNSLYGAADLLPTFIGTASSGNDSVDWKGACFFENTA 91

Query:    92 WMEFHNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNEWE 151
             W+EFHNKSGSEFGGGTLHIK   AHSWTCMDLYVFATPYRVTW +YF+SR+HT+EF EW+
Sbjct:    92 WLEFHNKSGSEFGGGTLHIKADKAHSWTCMDLYVFATPYRVTWTWYFISRQHTVEFPEWD 151

Query:   152 GKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASFEQ 211
             GK EYEYVKNKGVSIFLM AGMLGTL+ALWDVFPLF+NTGWGE+SN+ FL+KHMGA+FE 
Sbjct:   152 GKAEYEYVKNKGVSIFLMHAGMLGTLQALWDVFPLFSNTGWGESSNLAFLEKHMGANFEP 211

Query:   212 RPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWV 271
             RPEPW TNVT ++I SGD LA+SKIRGRWGGFETLEKWV+GAYAGH+AV LRDSEGKLWV
Sbjct:   212 RPEPWVTNVTTDQIQSGDLLAISKIRGRWGGFETLEKWVSGAYAGHSAVALRDSEGKLWV 271

Query:   272 GESGHENDE 280
             GESG+END+
Sbjct:   272 GESGNENDK 280

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

GO:0010260 "organ senescence" evidence=RCA

TAIR|locus:2020553 AT1G70160 "AT1G70160" [Arabidopsis thaliana (taxid:3702)]

 Score = 921 (329.3 bits), Expect = 1.9e-92, P = 1.9e-92
 Identities = 161/251 (64%), Positives = 199/251 (79%)

Query:    32 ALKYPFHPRDILPVLPRQVSWPILNALNGAADLLPAFVGSASDQTGTVEWKGACFYQNQA 91
             +LK PF   D+LP+LPRQVSWP+LN+ + A DLLP F+GS +    ++EWKGACF  N+A
Sbjct:    24 SLKVPFSVNDVLPMLPRQVSWPVLNSFHNAVDLLPVFIGSVTPNNVSIEWKGACFNGNEA 83

Query:    92 WMEF--HNKSGSEFGGGTLHIKVSDAHSWTCMDLYVFATPYRVTWDYYFLSREHTLEFNE 149
              ++    ++     GGG LH+K S AHS TCMDLYVFATPYR+TWDYYF +R+HTL F+ 
Sbjct:    84 RLDITGSDRDVPGLGGGVLHLKTSKAHSLTCMDLYVFATPYRITWDYYFSARDHTLNFDS 143

Query:   150 WEGKLEYEYVKNKGVSIFLMQAGMLGTLEALWDVFPLFTNTGWGENSNIGFLKKHMGASF 209
             WE K E EYVK  GVS+FLM +GMLGTL +L DV PLF+NT WG+N+N+ FL KHMGA+F
Sbjct:   144 WEEKAELEYVKEHGVSVFLMPSGMLGTLLSLIDVLPLFSNTAWGQNANLAFLTKHMGATF 203

Query:   210 EQRPEPWFTNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKL 269
             E+R +PW + +  E++HSGDFLAVSKIRGRWGGFETLEKWVTGA+AGHTAVCL+D  G L
Sbjct:   204 EKRSQPWRSMINPEDVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDDLGNL 263

Query:   270 WVGESGHENDE 280
             WVGESGHEN++
Sbjct:   264 WVGESGHENEK 274


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.137   0.454    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      304       278   0.00081  115 3  11 22  0.49    33
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  625 (66 KB)
  Total size of DFA:  253 KB (2133 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.73u 0.11s 22.84t   Elapsed:  00:00:01
  Total cpu time:  22.73u 0.11s 22.84t   Elapsed:  00:00:01
  Start:  Sat May 11 01:27:02 2013   End:  Sat May 11 01:27:03 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	304
PF05708	158	DUF830: Orthopoxvirus protein of unknown function	95.82
PRK10030	197	hypothetical protein; Provisional	93.82
PRK11470	200	hypothetical protein; Provisional	92.42
PRK11479	274	hypothetical protein; Provisional	86.49

>PF05708 DUF830: Orthopoxvirus protein of unknown function (DUF830); PDB: 2IF6_B 3KW0_C

Probab=95.82  E-value=0.018  Score=47.75  Aligned_cols=46  Identities=17%  Similarity=0.266  Sum_probs=35.5

Q ss_pred             CCCCCEEEEEeecccCCchhhHHHhhcCcCcceeEEEEecCCCcEEEEec
Q 022015          225 IHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGES  274 (304)
Q Consensus       225 IhSGDFLaVsrirgrwdGfdtlikW~TGA~aGHTav~Lrd~dGeLwV~ES  274 (304)
                      .|+||.|...--    +.+...++=+|++..||.+|.+++.+++.||+|+
T Consensus         2 l~~GDIil~~~~----~~~s~~i~~~t~~~~~HvgI~~~~~~~~~~viea   47 (158)
T PF05708_consen    2 LQTGDIILTRGK----SSLSKAIRPVTSSPYSHVGIVIGDEGQEPYVIEA   47 (158)
T ss_dssp             --TT-EEEEEE-----SCCHHHHHHHHTSS--EEEEEEEETTE-EEEEEE
T ss_pred             CCCeeEEEEECC----chHHHHHHHHhCCCCCEEEEEEecCCCceEEEEe
Confidence            589999988644    7789999999999999999999987778999999

>PRK10030 hypothetical protein; Provisional

Probab=93.82  E-value=0.13  Score=46.25  Aligned_cols=48  Identities=17%  Similarity=0.113  Sum_probs=41.6

Q ss_pred             CcCCCCCEEEEEeecccCCchhhHHHhhcCcCcceeEEEEecCCCcEEEEecc
Q 022015          223 EEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESG  275 (304)
Q Consensus       223 ~DIhSGDFLaVsrirgrwdGfdtlikW~TGA~aGHTav~Lrd~dGeLwV~ES~  275 (304)
                      .++|+||.|-.+--    +.....|+.+|++.-.|.++..+. +|+.+|+|+-
T Consensus        19 ~~l~~GDlif~~g~----~~~s~aI~~~T~s~~SHVGIi~~~-~~~~~ViEAv   66 (197)
T PRK10030         19 WQPQTGDIIFQISR----SSQSKAIQLATHSDYSHTGMIVKR-NKKPYVFEAV   66 (197)
T ss_pred             cCCCCCCEEEEeCC----CcHhHHHhHhhCCCCceEEEEEEE-CCcEEEEEec
Confidence            38899999988743    556899999999999999999985 8999999995

>PRK11470 hypothetical protein; Provisional

Probab=92.42  E-value=0.31  Score=44.71  Aligned_cols=58  Identities=17%  Similarity=0.210  Sum_probs=43.4

Q ss_pred             CCcCCCCCEEEEEeecccCCchhhHHHhhcCcCcceeEEEEecCCCcEEEEeccCccccc-ccccc
Q 022015          222 VEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENDEV-KLTDL  286 (304)
Q Consensus       222 ~~DIhSGDFLaVsrirgrwdGfdtlikW~TGA~aGHTav~Lrd~dGeLwV~ES~~en~~~-~~~~~  286 (304)
                      +.++|+||.|-++--.+.   + -.|+.+||+...|..|..+-..++-+|+||-   +++ ++|.|
T Consensus         6 ~~~l~~GDLvF~~~~~~~---~-~aI~~aT~s~~sHvGII~~~~~~~~~VlEA~---~~~vr~TpL   64 (200)
T PRK11470          6 PAEYEIGDIVFTCIGAAL---F-GQISAASNCWSNHVGIIIGHNGEDFLVAESR---VPLSTVTTL   64 (200)
T ss_pred             cCCCCCCCEEEEeCCcch---h-HHHHhccCCccceEEEEEEEcCCceEEEEec---CCceEEeEH
Confidence            469999999998853222   3 3588899999999999995435689999994   344 55554

>PRK11479 hypothetical protein; Provisional

Probab=86.49  E-value=0.7  Score=44.37  Aligned_cols=50  Identities=24%  Similarity=0.337  Sum_probs=40.7

Q ss_pred             ccCCCCcCCCCCEEEEEeecccCCchhhHHHhhcCcCcceeEEEEecCCCcEEEEecc
Q 022015          218 TNVTVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESG  275 (304)
Q Consensus       218 v~i~~~DIhSGDFLaVsrirgrwdGfdtlikW~TGA~aGHTav~Lrd~dGeLwV~ES~  275 (304)
                      ..|+.+++|+||.|....-    +.+.-.|++.|++...|.+|.+-  ||+  ++|+-
T Consensus        58 ~~Vs~~~LqpGDLVFfst~----t~~S~~Ik~~T~s~~SHVgIylG--dg~--vIEA~  107 (274)
T PRK11479         58 KEITAPDLKPGDLLFSSSL----GVTSFGIRVFSTSSVSHVAIYLG--ENN--VAEAT  107 (274)
T ss_pred             cccChhhCCCCCEEEEecC----CccccceecccCCCCcEEEEEec--CCe--EEEcC
Confidence            3678899999999997643    45677899999999999999994  454  78884

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	304
3kw0_A	214	Cysteine peptidase; structural genomics, joint cen	96.63
2if6_A	186	Hypothetical protein YIIX; structural genomics, me	96.49

>3kw0_A Cysteine peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: LYS; 2.50A {Bacillus cereus}

Probab=96.63  E-value=0.0032  Score=55.48  Aligned_cols=50  Identities=22%  Similarity=0.236  Sum_probs=44.4

Q ss_pred             CCcCCCCCEEEEEeecccCCchhhHHHhhcCcCcceeEEEEecCCCcEEEEeccC
Q 022015          222 VEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGH  276 (304)
Q Consensus       222 ~~DIhSGDFLaVsrirgrwdGfdtlikW~TGA~aGHTav~Lrd~dGeLwV~ES~~  276 (304)
                      .+++++||.|.+.   |+ +.++.+|+++|++..+|.+|.+++ +++.||+|+..
T Consensus        37 ~~~l~~GDlif~~---~~-~~~s~~I~~~T~s~~sHvgI~~~~-~~~~~vieA~~   86 (214)
T 3kw0_A           37 INVLKTGDIFLCS---GN-YLVSKLIKKVSESMFSHTGIIVKW-GEHTLIMESVE   86 (214)
T ss_dssp             TTTCCTTCEEEEE---EC-SHHHHHHHHHTTSSCCEEEEEEEE-TTEEEEEEEET
T ss_pred             HhhCCCCCEEEEe---CC-CcHHHHHHHhcCCCCcEEEEEEec-CCceEEEEecC
Confidence            4799999999985   44 889999999999999999999986 78999999953

>2if6_A Hypothetical protein YIIX; structural genomics, metalloprotein, PSI-2, PR structure initiative, NEW YORK SGX research center for STRU genomics; 1.80A {Escherichia coli} SCOP: d.3.1.21

Probab=96.49  E-value=0.0036  Score=52.97  Aligned_cols=50  Identities=18%  Similarity=0.148  Sum_probs=41.9

Q ss_pred             CCCcCCCCCEEEEEeecccCCchhhHHHhhcCcCcceeEEEEecCCCcEEEEecc
Q 022015          221 TVEEIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESG  275 (304)
Q Consensus       221 ~~~DIhSGDFLaVsrirgrwdGfdtlikW~TGA~aGHTav~Lrd~dGeLwV~ES~  275 (304)
                      +++++|+||.|...   |+ ..+..+|+.+|++..+|.++.+.+ +|+.+|+|+.
T Consensus         1 ~~~~l~~GDlvf~~---~~-~~~s~~I~~~t~~~~sHvgI~~~~-~~~~~viea~   50 (186)
T 2if6_A            1 SLWQPQTGDIIFQI---SR-SSQSKAIQLATHSDYSHTGMLVMR-NKKPYVFEAV   50 (186)
T ss_dssp             --CCCCTTCEEEEC---CC-STTHHHHHHHHTSSCCEEEEEEEE-TTEEEEEEES
T ss_pred             CcccCCCCCEEEEE---cC-CchHHHHHHHcCCCCceEEEEEEe-CCcEEEEEeC
Confidence            46789999998763   44 678999999999999999999975 7889999996

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	304
d2if6a1	182	Hypothetical protein YiiX {Escherichia coli [TaxId	96.41

>d2if6a1 d.3.1.21 (A:19-200) Hypothetical protein YiiX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: YiiX-like
domain: Hypothetical protein YiiX
species: Escherichia coli [TaxId: 562]

Probab=96.41  E-value=0.0022  Score=51.47  Aligned_cols=49  Identities=18%  Similarity=0.144  Sum_probs=42.2

Q ss_pred             cCCCCCEEEEEeecccCCchhhHHHhhcCcCcceeEEEEecCCCcEEEEeccCc
Q 022015          224 EIHSGDFLAVSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHE  277 (304)
Q Consensus       224 DIhSGDFLaVsrirgrwdGfdtlikW~TGA~aGHTav~Lrd~dGeLwV~ES~~e  277 (304)
                      +.|+||.|.++   |+ +.+..+|+++|+|.-+|.+|++.. +|+.+|.|+...
T Consensus         2 q~q~GDIlf~~---~~-s~~s~aI~~~T~s~~sHvgIv~~~-~~~~~v~~a~~~   50 (182)
T d2if6a1           2 QPQTGDIIFQI---SR-SSQSKAIQLATHSDYSHTGMLVMR-NKKPYVFEAVGP   50 (182)
T ss_dssp             CCCTTCEEEEC---CC-STTHHHHHHHHTSSCCEEEEEEEE-TTEEEEEEESSS
T ss_pred             CCCCccEEEEe---CC-CcHHHHHHHHhCCCCceEEEEEEe-CCeEEEEeeccc
Confidence            46899988873   55 789999999999999999999974 899999998643