Citrus Sinensis ID: 022101
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 302 | ||||||
| 359474017 | 585 | PREDICTED: O-glucosyltransferase rumi ho | 0.854 | 0.441 | 0.653 | 2e-97 | |
| 297742541 | 497 | unnamed protein product [Vitis vinifera] | 0.854 | 0.519 | 0.653 | 6e-97 | |
| 147800396 | 439 | hypothetical protein VITISV_020976 [Viti | 0.711 | 0.489 | 0.729 | 1e-93 | |
| 255539447 | 528 | KDEL motif-containing protein 1 precurso | 0.877 | 0.501 | 0.577 | 1e-90 | |
| 297808383 | 543 | hypothetical protein ARALYDRAFT_910396 [ | 0.794 | 0.441 | 0.617 | 6e-89 | |
| 15237842 | 542 | uncharacterized protein [Arabidopsis tha | 0.791 | 0.440 | 0.621 | 9e-89 | |
| 332071136 | 546 | glycosyltransferase [Panax notoginseng] | 0.774 | 0.428 | 0.634 | 4e-87 | |
| 359489773 | 519 | PREDICTED: O-glucosyltransferase rumi-li | 0.761 | 0.443 | 0.649 | 9e-87 | |
| 255541542 | 522 | KDEL motif-containing protein 1 precurso | 0.778 | 0.450 | 0.609 | 5e-86 | |
| 255539445 | 506 | KDEL motif-containing protein 1 precurso | 0.781 | 0.466 | 0.623 | 6e-86 |
| >gi|359474017|ref|XP_002269577.2| PREDICTED: O-glucosyltransferase rumi homolog [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 177/271 (65%), Positives = 205/271 (75%), Gaps = 13/271 (4%)
Query: 1 MIELFAFSIILQSNFSVHNISRNKTVIIVSRKPQNRPPKRITTPLNC-VKNQTQTCPTNY 59
I F FS + F V+N R I + + RP I PLNC +N TQTCP NY
Sbjct: 115 FISFFCFSS--RFIFLVNNSERKAVPISENHRKTPRP---IVVPLNCSARNLTQTCPGNY 169
Query: 60 PKTSQTQESISDYSIPPTSTCPDYFRWIHEDLSPWKVTGITRDMLERANQTAHFRLILVN 119
P T T D + P CPDYFRWIHEDL PWK TGI+RDM+ERA ++AHFRL++V
Sbjct: 170 PTTFDT-----DLAWKPV--CPDYFRWIHEDLKPWKTTGISRDMVERAKRSAHFRLVIVK 222
Query: 120 NKVYIHKYKQSIQTRDVFTIWGILQLLRKYPGRLPDLELMFDCDDRPVIRSRDYSGPNNK 179
KVYI KYK+SIQTRDVFTIWGILQLLR+YPG+L DLEL FDC+DRPVIRS D+ GPN+
Sbjct: 223 GKVYIEKYKKSIQTRDVFTIWGILQLLRRYPGKLLDLELTFDCNDRPVIRSGDHRGPNST 282
Query: 180 GPPPLFRYSGDRWTMDIVFPDWSFWGWAEINIKPWESLLRELKEGNNGRNWIDREPYAYW 239
PPPLFRY GDRWT+D+VFPDWSFWGW EIN+KPW +LL++LKEGNN W++REPYAYW
Sbjct: 283 SPPPLFRYCGDRWTLDVVFPDWSFWGWPEINMKPWGNLLKDLKEGNNRTKWMEREPYAYW 342
Query: 240 KGNPFVAETRRDLLTCNLSDKHDWNARLYVQ 270
KGNP VAETRRDLLTCN+SD DWNARL+VQ
Sbjct: 343 KGNPLVAETRRDLLTCNVSDVQDWNARLFVQ 373
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297742541|emb|CBI34690.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147800396|emb|CAN66409.1| hypothetical protein VITISV_020976 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255539447|ref|XP_002510788.1| KDEL motif-containing protein 1 precursor, putative [Ricinus communis] gi|223549903|gb|EEF51390.1| KDEL motif-containing protein 1 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|297808383|ref|XP_002872075.1| hypothetical protein ARALYDRAFT_910396 [Arabidopsis lyrata subsp. lyrata] gi|297317912|gb|EFH48334.1| hypothetical protein ARALYDRAFT_910396 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|15237842|ref|NP_197774.1| uncharacterized protein [Arabidopsis thaliana] gi|10176852|dbj|BAB10058.1| unnamed protein product [Arabidopsis thaliana] gi|48310551|gb|AAT41837.1| At5g23850 [Arabidopsis thaliana] gi|62320258|dbj|BAD94534.1| putative protein [Arabidopsis thaliana] gi|332005839|gb|AED93222.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|332071136|gb|AED99886.1| glycosyltransferase [Panax notoginseng] | Back alignment and taxonomy information |
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| >gi|359489773|ref|XP_002273091.2| PREDICTED: O-glucosyltransferase rumi-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255541542|ref|XP_002511835.1| KDEL motif-containing protein 1 precursor, putative [Ricinus communis] gi|223549015|gb|EEF50504.1| KDEL motif-containing protein 1 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|255539445|ref|XP_002510787.1| KDEL motif-containing protein 1 precursor, putative [Ricinus communis] gi|223549902|gb|EEF51389.1| KDEL motif-containing protein 1 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 302 | ||||||
| TAIR|locus:2172818 | 542 | AT5G23850 "AT5G23850" [Arabido | 0.857 | 0.477 | 0.583 | 2.5e-88 | |
| TAIR|locus:2101358 | 539 | AT3G48980 "AT3G48980" [Arabido | 0.784 | 0.439 | 0.615 | 9.1e-84 | |
| TAIR|locus:2050674 | 523 | DTA2 "AT2G45830" [Arabidopsis | 0.741 | 0.428 | 0.611 | 2.3e-78 | |
| TAIR|locus:2031274 | 578 | AT1G63420 "AT1G63420" [Arabido | 0.827 | 0.432 | 0.535 | 3.8e-78 | |
| TAIR|locus:2098936 | 498 | AT3G61270 "AT3G61270" [Arabido | 0.735 | 0.445 | 0.589 | 1.2e-74 | |
| TAIR|locus:2098946 | 536 | AT3G61280 "AT3G61280" [Arabido | 0.857 | 0.483 | 0.52 | 1.6e-72 | |
| TAIR|locus:2050664 | 523 | AT2G45840 "AT2G45840" [Arabido | 0.784 | 0.453 | 0.536 | 5.8e-66 | |
| TAIR|locus:2098956 | 455 | AT3G61290 "AT3G61290" [Arabido | 0.731 | 0.485 | 0.532 | 2.3e-64 | |
| TAIR|locus:2007362 | 507 | AT1G07220 "AT1G07220" [Arabido | 0.692 | 0.412 | 0.438 | 1.3e-52 | |
| FB|FBgn0086253 | 411 | rumi "rumi" [Drosophila melano | 0.559 | 0.411 | 0.243 | 2e-08 |
| TAIR|locus:2172818 AT5G23850 "AT5G23850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 882 (315.5 bits), Expect = 2.5e-88, P = 2.5e-88
Identities = 158/271 (58%), Positives = 204/271 (75%)
Query: 8 SIILQSNFSVHNISRNKTVIIVSRKPQNRPPKRIT-TP-----LNCVKNQTQ-TCPTN-Y 59
+++L+ + ++ +T I + P RP IT +P L+C N+T +CP+N Y
Sbjct: 63 TVLLEKKAATTTTTKTQTQTITPKYP--RPTTVITQSPKPEFTLHCSANETTASCPSNKY 120
Query: 60 PKTSQTQESISDYSIPPTSTCPDYFRWIHEDLSPWKVTGITRDMLERANQTAHFRLILVN 119
P T+ ++ D + PPT+TCPDYFRWIHEDL PW TGITR+ LERA +TA FRL +V
Sbjct: 121 PTTTSFEDD--DTNHPPTATCPDYFRWIHEDLRPWSRTGITREALERAKKTATFRLAIVG 178
Query: 120 NKVYIHKYKQSIQTRDVFTIWGILQLLRKYPGRLPDLELMFDCDDRPVIRSRDYSGPNNK 179
K+Y+ K++ + QTRDVFTIWG LQLLRKYPG++PDLELMFDC D PV+R+ +++G N
Sbjct: 179 GKIYVEKFQDAFQTRDVFTIWGFLQLLRKYPGKIPDLELMFDCVDWPVVRATEFAGANAP 238
Query: 180 GPPPLFRYSGDRWTMDIVFPDWSFWGWAEINIKPWESLLRELKEGNNGRNWIDREPYAYW 239
PPPLFRY G+ T+DIVFPDWSFWGWAE+NIKPWESLL+EL+EGN WI+REPYAYW
Sbjct: 239 SPPPLFRYCGNEETLDIVFPDWSFWGWAEVNIKPWESLLKELREGNERTKWINREPYAYW 298
Query: 240 KGNPFVAETRRDLLTCNLSDKHDWNARLYVQ 270
KGNP VAETR+DL+ CN+S++H+WNARLY Q
Sbjct: 299 KGNPMVAETRQDLMKCNVSEEHEWNARLYAQ 329
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| TAIR|locus:2101358 AT3G48980 "AT3G48980" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2050674 DTA2 "AT2G45830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2031274 AT1G63420 "AT1G63420" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2098936 AT3G61270 "AT3G61270" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2098946 AT3G61280 "AT3G61280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2050664 AT2G45840 "AT2G45840" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2098956 AT3G61290 "AT3G61290" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2007362 AT1G07220 "AT1G07220" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| FB|FBgn0086253 rumi "rumi" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00000391001 | SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (373 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 302 | |||
| pfam05686 | 281 | pfam05686, Glyco_transf_90, Glycosyl transferase f | 1e-107 | |
| smart00672 | 256 | smart00672, CAP10, Putative lipopolysaccharide-mod | 2e-53 |
| >gnl|CDD|218692 pfam05686, Glyco_transf_90, Glycosyl transferase family 90 | Back alignment and domain information |
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Score = 313 bits (803), Expect = e-107
Identities = 118/175 (67%), Positives = 140/175 (80%), Gaps = 1/175 (0%)
Query: 76 PTSTCPDYFRWIHEDLSPWKVTGITRDMLERANQTAHFRLILVNNKVYIHKYKQSIQTRD 135
+ TCPDYFRWIHEDL PW+ TGITR+M+ERA + AHFR +++N +VY+ Y +S QTRD
Sbjct: 2 SSPTCPDYFRWIHEDLEPWRETGITREMVERAKRKAHFRYVIINGRVYVETYGESFQTRD 61
Query: 136 VFTIWGILQLLRKYPGRLPDLELMFDCDDRPVIRSRDYSGPNNKGPPPLFRYSGDRWTMD 195
VFTIWGILQLLRKYPGRLPDLELMF+C D PV++ RDY GP N PPPLF Y GD T+D
Sbjct: 62 VFTIWGILQLLRKYPGRLPDLELMFNCGDWPVVKKRDYRGP-NANPPPLFSYCGDDDTLD 120
Query: 196 IVFPDWSFWGWAEINIKPWESLLRELKEGNNGRNWIDREPYAYWKGNPFVAETRR 250
IVFPDWSFWGW E+NI W+ L ++LKEGN W DREPYAYW+GNP VAE ++
Sbjct: 121 IVFPDWSFWGWPEVNIGRWDLLRKDLKEGNTRVKWEDREPYAYWRGNPSVAEAQK 175
|
This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. Length = 281 |
| >gnl|CDD|214773 smart00672, CAP10, Putative lipopolysaccharide-modifying enzyme | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 302 | |||
| KOG2458 | 528 | consensus Endoplasmic reticulum protein EP58, cont | 100.0 | |
| PF05686 | 395 | Glyco_transf_90: Glycosyl transferase family 90; I | 100.0 | |
| smart00672 | 256 | CAP10 Putative lipopolysaccharide-modifying enzyme | 99.97 |
| >KOG2458 consensus Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif [General function prediction only] | Back alignment and domain information |
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Probab=100.00 E-value=1.2e-64 Score=494.88 Aligned_cols=242 Identities=54% Similarity=1.048 Sum_probs=221.0
Q ss_pred cccccC---C-CCCCcCCCCCCCCCCCcCCCCCCCCCCCCCCCcchhhHhhccCccccCCCCHHHHHHhhccCeeEEEEE
Q 022101 43 TPLNCV---K-NQTQTCPTNYPKTSQTQESISDYSIPPTSTCPDYFRWIHEDLSPWKVTGITRDMLERANQTAHFRLILV 118 (302)
Q Consensus 43 ~~~~~~---~-~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~C~~~F~qI~~DL~Pw~~~GItre~lera~~~g~~Rv~I~ 118 (302)
+.|.|+ + +.+++||++...... .+..++..++..+|||||+|||+||.||+++||||+++++|++.+++|++|+
T Consensus 94 ~~l~cs~~s~~~~~~~~p~~~~~~s~--~~~~~~~~~~~~tCPDyfrWIheDL~Pw~etgItre~~erak~~a~fr~vI~ 171 (528)
T KOG2458|consen 94 YRLYCSLFSGLKREVLCPSSHVSKSP--YILKNPVYHESCTCPDYFRWIHEDLCPWRETGITREMAERAKRKAHFRLVIK 171 (528)
T ss_pred hhhhhhhhhcccccccccccccccCc--cccCCCCCCCCCCCCcHHHHHHHhcCccccccchHHHhhhhhcccceeeeee
Confidence 457883 2 567889998655532 2234477889999999999999999999999999999999999999999999
Q ss_pred CCEEEEEeccCCCCchhHHHHHHHHHHHHHcCCCCCCcEEEeeCCCCccccccCCCCCCCCCCCCeEEecCCCCCceeee
Q 022101 119 NNKVYIHKYKQSIQTRDVFTIWGILQLLRKYPGRLPDLELMFDCDDRPVIRSRDYSGPNNKGPPPLFRYSGDRWTMDIVF 198 (302)
Q Consensus 119 nGklYv~~~~~~~~sR~~ftl~~il~lL~~~~~~LPDmEFvfN~~D~P~v~~~~~~g~~~~~~~Pvfsyck~~~~~DIl~ 198 (302)
+|++||+.|++++++|++||+||++|||+++|++|||+||+|||+|||.|.+.+|+| + .+|+|||+||++.+++||||
T Consensus 172 ~g~~yv~~Y~ks~qtrd~ft~wgilqLlr~ypgklPDlElmf~~~D~P~v~~~~~~~-~-~~ppPlF~yCg~~~s~DIVf 249 (528)
T KOG2458|consen 172 EGRLYVENYRKSIQTRDVFTIWGILQLLRTYPGKLPDLELMFNCGDWPLVRKKDFQG-T-PPPPPLFSYCGSSESLDIVF 249 (528)
T ss_pred cCceehhhhhhhhcccchHHHHHHHHHHHhcCCCCCCceeeeecCCccccchhhccC-C-CCCCCeEeecCCcccccccc
Confidence 999999999999999999999999999999999999999999999999999999988 3 48999999999999999999
Q ss_pred cCCCccccccccccchHHHHHHHHcccCCCCCCCCcCcEEEeeCCCCh-HhHHHHHhccccCCCCcccceEEeccccccc
Q 022101 199 PDWSFWGWAEINIKPWESLLRELKEGNNGRNWIDREPYAYWKGNPFVA-ETRRDLLTCNLSDKHDWNARLYVQVISFIYI 277 (302)
Q Consensus 199 PDwsFWgWpe~~I~pw~~~~~~i~e~~~~~pW~~K~pkafWRG~~~~~-~~R~~Ll~~~~s~~~~w~a~v~~~dW~~~~~ 277 (302)
|||+||||+|++|++|+.++++|.|||++++|.+|.|+||||||++++ ++|++||+||.+.-.||+++++.|||.+|.
T Consensus 250 Pdwsfwgw~e~nik~w~~~~~~~~egn~~~~W~~r~~yAywrGnp~v~e~~rl~ll~cn~s~~~d~~~~~y~qdw~~E~- 328 (528)
T KOG2458|consen 250 PDWSFWGWAEVNIKPWEKLLEDIVEGNKRPKWKNKNPYAYWRGNPSVAERLRLDLLSCNNSELVDANATLYFQDWSKES- 328 (528)
T ss_pred cCccccCChhhcccccchHHHHHHhhccCCCcccCCceeEecCCCCccccchhhhhhcCCchhhchhhhhHHHhhhhhh-
Confidence 999999999999999999999999999999999999999999999999 999999999999999999999999998765
Q ss_pred eeccCCCCCcchHHH
Q 022101 278 THLCSKIPGFNFFLI 292 (302)
Q Consensus 278 ~~~~~~~~~~~~~~~ 292 (302)
.+| .++++||..
T Consensus 329 -~~G--~k~s~l~dq 340 (528)
T KOG2458|consen 329 -KLG--FKQSNLFDQ 340 (528)
T ss_pred -hcc--ccccchhhh
Confidence 455 777777654
|
|
| >PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS | Back alignment and domain information |
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| >smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00