Citrus Sinensis ID: 022146

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300--
Protein Sequence
MSGVGSEWYQWRFSAAAFIGLLLVASVSVSAQSTLKPEATSANKIDHVEPKNVIKVPTHKIRSGYKHVWPDIKFGWKIVVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKSSVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAFLKGVETWKKETITKVEAAKRLELDRNGDQAEEFKCEPENLSNTTPKETKEPVKSEVSILKNIYWKELGLLVAVWVIVLALQIAKVIICFVFTPPTLQLMHSFEVN
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHccccHHHHHHHHHHHHHHHHHHHHHccEEEEccccHHHHEEEEEcc
Coil and Loop (DISEMBL)
MSGVGSEWYQWRFSAAAFIGLLLVASVSVSaqstlkpeatsankidhvepknvikvpthkirsgykhvwpdikfGWKIVVSSIIGFFGAacgsvggvggggifVPMLNliigfdpkssvalskcmITGTAVATVVYNLrqrhptldmpviDYDLALLFQPMLVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAFLKGVETWKKETITKVEAAKRLeldrngdqaeefkcepenlsnttpketkepvkSEVSILKNIYWKELGLLVAVWVIVLALQIAKVIICfvftpptlqlmhsfevn
Flexible Loop (DISEMBL)
MSGVGSEWYQWRFSAAAFIGLLLVASVSVSAQSTLKpeatsankidhvepknvikvpthkirsgykhvwPDIKFGWKIVVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKSSVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAFLKGVETWKKETITKVEaakrleldrngdqaeefkcepenlsnttpketkepvkSEVSILKNIYWKELGLLVAVWVIVLALQIAKVIICFVFTPPTLQLMHSFEVN
Low Complexity Region (SEG)
MSGVGSEWYQWRFSAAAFIGlllvasvsvsaQSTLKPEATSANKIDHVEPKNVIKVPTHKIRSGYKHVWPDIKFGWKIVVSSIIgffgaacgsvggvggggIFVPMLNLIIGFDPKSSVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAFLKGVETWKKETITKVEAAKRLELDRNGDQAEEFKCEPENLSNTTPKETKEPVKSEVSILKNIYWKELGllvavwvivlalqiaKVIICFVFTPPTLQLMHSFEVN
Disordered region (IsUnstruct)
*****SEWYQWRFSAAAFIGLLLVASVSVS*****************VEPKNVIKVPTHKIRSGYKHVWPDIKFGWKIVVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKSSVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAFLKGVETWKKETITKVE***************************************VSILKNIYWKELGLLVAVWVIVLALQIAKVIICFVFTPPTLQLM******
Disordered Region (DISOPRED)
*****SEWYQWRFSAAAFIGLLLVASVSVSAQS*********************KVPTHKIRSGYKHVWPDIKFGWKIVVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKSSVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAFLKGVET****************************************************LKNIYWKELGLLVAVWVIVLALQIAKVIICFVFTPPTLQLMHSF***
Disordered Region (DISEMBL)
MSGVGSEWYQWRFSAAAFIGLLLVASVSVSAQSTLKPEATSANKIDHVEPKNVIKVPTHKIRSGYKHVWPDIKFGWKIVVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKSSVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAFLKGVETWKKETITKVEAAKRLELDRNG***************************EVSILKNIYWKELGLLVAVWVIVLALQIAKVIICFVFTPPTLQLMHSFEVN
Disordered Region (DISPRO)
****GSEWYQWRFSAAAFIGLLLVASVSVSAQSTLKPE*********VEPKNVIKVPTHKIRSGYKHVWPDIKFGWKIVVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKSSVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAFLKGVETWKKETITKVEAA***********************************SEVSILKNIYWKELGLLVAVWVIVLALQIAKVIICFVFTPPTLQLMHSFEVN
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSGVGSEWYQWRFSAAAFIGLLLVASVSVSAQSTLKPEATSANKIDHVEPKNVIKVPTHKIRSGYKHVWPDIKFGWKIVVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKSSVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAFLKGVETWKKETITKVEAAKRLELDRNGDQAEEFKCEPENLSNTTPKETKEPVKSEVSILKNIYWKELGLLVAVWVIVLALQIAKVIICFVFTPPTLQLMHSFEVN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	302
225442593	481	PREDICTED: uncharacterized protein LOC10	0.930	0.584	0.644	2e-90
255549968	483	conserved hypothetical protein [Ricinus	0.930	0.581	0.618	1e-85
337733644	353	hypothetical protein [Citrus trifoliata]	0.519	0.444	0.993	9e-84
225430021	478	PREDICTED: uncharacterized protein LOC10	0.913	0.577	0.601	2e-83
224092328	479	predicted protein [Populus trichocarpa]	0.907	0.572	0.629	2e-82
224070901	426	predicted protein [Populus trichocarpa]	0.721	0.511	0.752	1e-80
255551046	476	conserved hypothetical protein [Ricinus	0.831	0.527	0.629	7e-77
356518316	477	PREDICTED: uncharacterized protein LOC10	0.837	0.530	0.598	5e-74
224143011	474	predicted protein [Populus trichocarpa]	0.903	0.575	0.570	5e-74
30682879	476	Sulfite exporter TauE/SafE family protei	0.913	0.579	0.577	2e-73

>gi|225442593|ref|XP_002284423.1| PREDICTED: uncharacterized protein LOC100266912 [Vitis vinifera] gi|297743252|emb|CBI36119.3| unnamed protein product [Vitis vinifera]

 Score =  338 bits (866), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 183/284 (64%), Positives = 217/284 (76%), Gaps = 3/284 (1%)

Query: 1   MSGVGSEWYQWRFSAAAFIGLLLVASVSVSAQSTLKPEATSANKIDHVEPKNVIKVPT-- 58
           M+G+GS+W+  R  A   +  L VASV VSA+ TLK E++S +    VEP  + K+    
Sbjct: 1   MAGIGSKWWGLRRVALILVTFLGVASVLVSAERTLKQESSSHDGSREVEPGLMTKIVNFL 60

Query: 59  -HKIRSGYKHVWPDIKFGWKIVVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKS 117
                S Y+HVWPD+KFGW+I+V +IIGFFGAA GSVGGVGGGGIFVPML L+IGFD KS
Sbjct: 61  WDPNLSAYEHVWPDMKFGWQIIVGTIIGFFGAAFGSVGGVGGGGIFVPMLTLVIGFDAKS 120

Query: 118 SVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFA 177
           S A+SKCMI G A +TV YNL+ RHPTLDMP+IDYDLALLFQPMLVLGISIGVAFNVIFA
Sbjct: 121 STAISKCMIMGAAASTVYYNLKLRHPTLDMPIIDYDLALLFQPMLVLGISIGVAFNVIFA 180

Query: 178 DWMITVLLIILFIGMSAKAFLKGVETWKKETITKVEAAKRLELDRNGDQAEEFKCEPENL 237
           DWM+TVLLI+LFIG S KAF KGVETWKKETI K EAAKRLE + NG +  E+K  P   
Sbjct: 181 DWMVTVLLIVLFIGTSTKAFFKGVETWKKETIIKKEAAKRLESNGNGSEDGEYKALPAGP 240

Query: 238 SNTTPKETKEPVKSEVSILKNIYWKELGLLVAVWVIVLALQIAK 281
           ++ T ++T  P   EVSI++N+ WKELGLL AVWVI+L LQI K
Sbjct: 241 NDGTQRDTNAPKDKEVSIIENVCWKELGLLFAVWVIILGLQIGK 284

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549968|ref|XP_002516035.1| conserved hypothetical protein [Ricinus communis] gi|223544940|gb|EEF46455.1| conserved hypothetical protein [Ricinus communis]

 Score =  322 bits (826), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 177/286 (61%), Positives = 216/286 (75%), Gaps = 5/286 (1%)

Query: 1   MSGVGSEW--YQWRFSAAAFIGLLLVASVSVSAQSTLKPEATSANKIDHVEPKNVIKVPT 58
           M+ +GSEW     R+  A+ I  + V S+++ +++  + E +S    + VE   +++V  
Sbjct: 1   MAMIGSEWKSLSLRYVKASLICFIGVVSMTIVSEARQQQEGSSDRNSEDVESAFLMRVVN 60

Query: 59  ---HKIRSGYKHVWPDIKFGWKIVVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDP 115
               K + GY HVWPD+KFGW+IVV SIIGFFGAA GSVGGVGGGGIFVPML LIIGFD 
Sbjct: 61  FLWQKGQLGYTHVWPDMKFGWQIVVGSIIGFFGAAFGSVGGVGGGGIFVPMLTLIIGFDA 120

Query: 116 KSSVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVI 175
           KSS A+SKCMITG A +TV YNL+ RHPTLDMP+IDYDLALLFQP+LVLGISIGVAFNVI
Sbjct: 121 KSSTAISKCMITGAAASTVYYNLKLRHPTLDMPIIDYDLALLFQPVLVLGISIGVAFNVI 180

Query: 176 FADWMITVLLIILFIGMSAKAFLKGVETWKKETITKVEAAKRLELDRNGDQAEEFKCEPE 235
           FADWMITVLLIILFIG S KAFLKGVETWKKETI K EAA+RL  +    +  E+K  P 
Sbjct: 181 FADWMITVLLIILFIGTSTKAFLKGVETWKKETIIKKEAARRLASNGGASEEVEYKPLPG 240

Query: 236 NLSNTTPKETKEPVKSEVSILKNIYWKELGLLVAVWVIVLALQIAK 281
             +N T  E+ EP + EVSI++N+ WKELG+L AVW+I+LAL+I K
Sbjct: 241 GPTNGTGPESNEPKREEVSIIENVRWKELGILFAVWLIILALEITK 286

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|337733644|gb|AEI72271.1| hypothetical protein [Citrus trifoliata]

 Score =  316 bits (809), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 156/157 (99%), Positives = 156/157 (99%)

Query: 125 MITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITVL 184
           MITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITVL
Sbjct: 1   MITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITVL 60

Query: 185 LIILFIGMSAKAFLKGVETWKKETITKVEAAKRLELDRNGDQAEEFKCEPENLSNTTPKE 244
           LIILFIGMSAKAFLKGVETWKKETITKVEAAKRLELDRNGDQAEEFKCEPENLSNTTPKE
Sbjct: 61  LIILFIGMSAKAFLKGVETWKKETITKVEAAKRLELDRNGDQAEEFKCEPENLSNTTPKE 120

Query: 245 TKEPVKSEVSILKNIYWKELGLLVAVWVIVLALQIAK 281
           TKEPVKSE SILKNIYWKELGLLVAVWVIVLALQIAK
Sbjct: 121 TKEPVKSEGSILKNIYWKELGLLVAVWVIVLALQIAK 157

Source: Citrus trifoliata

Species: Citrus trifoliata

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430021|ref|XP_002284175.1| PREDICTED: uncharacterized protein LOC100267889 [Vitis vinifera] gi|296081886|emb|CBI20891.3| unnamed protein product [Vitis vinifera]

 Score =  315 bits (807), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 172/286 (60%), Positives = 211/286 (73%), Gaps = 10/286 (3%)

Query: 1   MSGVGSEWYQWRFSAAAFIGLLLVASVSVSAQSTLKPEATSAN-----KIDHVEPKNVIK 55
           M+G  ++W       +      ++AS  VS + ++K EA++ N       +      V+ 
Sbjct: 1   MAGFATKWLMLMILCS-----FMLASAFVSGERSIKHEASTFNVTKEAGFNSNYLSKVVN 55

Query: 56  VPTHKIRSGYKHVWPDIKFGWKIVVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDP 115
                 RSGY+HVWP+++FGW+IVV S+IGFFGAA GSVGGVGGGGIFVPML+L+IGFDP
Sbjct: 56  FLWQSDRSGYQHVWPEMEFGWQIVVGSVIGFFGAAFGSVGGVGGGGIFVPMLSLVIGFDP 115

Query: 116 KSSVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVI 175
           KS+ ALSKCMI G A +TV YNL+ RHPTLDMP+IDYDLALLFQPML++GISIGVAFNV+
Sbjct: 116 KSATALSKCMIMGAAGSTVYYNLKLRHPTLDMPIIDYDLALLFQPMLMMGISIGVAFNVL 175

Query: 176 FADWMITVLLIILFIGMSAKAFLKGVETWKKETITKVEAAKRLELDRNGDQAEEFKCEPE 235
           FADWM+TVLLI+LF+G S KAFLKGVETWKKETI K EAAKRL  + NG +  E+K  P 
Sbjct: 176 FADWMVTVLLIVLFLGTSTKAFLKGVETWKKETIMKREAAKRLGTNGNGTEEVEYKPLPS 235

Query: 236 NLSNTTPKETKEPVKSEVSILKNIYWKELGLLVAVWVIVLALQIAK 281
             SN T   T +  + EVSI++N+YWKELGLLV VWV  LALQIAK
Sbjct: 236 GPSNGTQNATNKSKEPEVSIIENVYWKELGLLVFVWVAFLALQIAK 281

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092328|ref|XP_002309560.1| predicted protein [Populus trichocarpa] gi|222855536|gb|EEE93083.1| predicted protein [Populus trichocarpa]

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 182/289 (62%), Positives = 209/289 (72%), Gaps = 15/289 (5%)

Query: 1   MSGVGSEWYQWRFSAAAFIGLLLVASVSVSAQSTLKPEATSA--NKIDHVEPKNVIKV-- 56
           M+  G +W   R      +  LL A V VSA+  LK EATS   N+        V+K   
Sbjct: 1   MAEFGGKWRGLRSVLMVLLNFLL-AFVFVSAERGLKHEATSTRMNETGDSVSSYVLKAVN 59

Query: 57  ----PTHKIRSGYKHVWPDIKFGWKIVVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIG 112
               P HK   GY+HVWP++KFGW+IV+ SIIGFFGAA GSVGGVGGGGIFVPML+L+IG
Sbjct: 60  FLWQPDHK---GYQHVWPEMKFGWQIVLGSIIGFFGAAFGSVGGVGGGGIFVPMLSLVIG 116

Query: 113 FDPKSSVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAF 172
           FDPKS+ A+SKCMI G A++TV YNL+ RHPTLDMP+IDYDLALL QPML+LGISIGVAF
Sbjct: 117 FDPKSATAISKCMIMGAAISTVYYNLKLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAF 176

Query: 173 NVIFADWMITVLLIILFIGMSAKAFLKGVETWKKETITKVEAAKRLELDRNGDQAEEFKC 232
           NV+FADWM+TVLLIILF+G S KAFLKGVETWKKETI K EAAKRLE D       E+K 
Sbjct: 177 NVVFADWMVTVLLIILFLGTSTKAFLKGVETWKKETIMKREAAKRLESDGASAGEVEYKP 236

Query: 233 EPENLSNTTPKETKEPVKSEVSILKNIYWKELGLLVAVWVIVLALQIAK 281
            P   SN+  K  KE    EVSIL+N+YWKELGLLV VWV  L LQI K
Sbjct: 237 LPGGPSNSPQKADKE---EEVSILENVYWKELGLLVFVWVAFLVLQITK 282

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224070901|ref|XP_002303288.1| predicted protein [Populus trichocarpa] gi|222840720|gb|EEE78267.1| predicted protein [Populus trichocarpa]

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 164/218 (75%), Positives = 181/218 (83%)

Query: 64  GYKHVWPDIKFGWKIVVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKSSVALSK 123
           GY HVWPD+KFGWKIVV +IIGFFGAA GSVGGVGGGGIFVPML LIIGFD KSS A+SK
Sbjct: 14  GYTHVWPDMKFGWKIVVGTIIGFFGAALGSVGGVGGGGIFVPMLTLIIGFDAKSSTAISK 73

Query: 124 CMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITV 183
           CMITG A +TV YNL+ RHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITV
Sbjct: 74  CMITGAAASTVYYNLKLRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITV 133

Query: 184 LLIILFIGMSAKAFLKGVETWKKETITKVEAAKRLELDRNGDQAEEFKCEPENLSNTTPK 243
           LLIILFIG S KAFLKGVETWKKETI K EAA+RLE + + ++  E++  P   S     
Sbjct: 134 LLIILFIGTSTKAFLKGVETWKKETILKQEAARRLESNDDDNEEVEYQPLPGGPSGGGEA 193

Query: 244 ETKEPVKSEVSILKNIYWKELGLLVAVWVIVLALQIAK 281
           E KEP K  VSI++N+YWKELGLL AVW  +LAL+I K
Sbjct: 194 ENKEPKKEAVSIIENVYWKELGLLFAVWGAILALEIGK 231

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255551046|ref|XP_002516571.1| conserved hypothetical protein [Ricinus communis] gi|223544391|gb|EEF45912.1| conserved hypothetical protein [Ricinus communis]

 Score =  293 bits (750), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 168/267 (62%), Positives = 200/267 (74%), Gaps = 16/267 (5%)

Query: 22  LLVASVSVSAQSTLKPEATSANKID-------HVEPKNVIKVPTHKIRSGYKHVWPDIKF 74
            L+A V VSA+  ++ E T   + +        V+  + +  P    ++GY+HVWP+++F
Sbjct: 22  FLLAFVLVSAERGMRREFTGTPQTEGEGLSTYFVKAVDFLWQPD---QTGYRHVWPEMRF 78

Query: 75  GWKIVVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKSSVALSKCMITGTAVATV 134
           GW+IV+ +IIGFFGAA GSVGGVGGGGIFVPML+LIIGFDPKS+ A+SKCMI G A +TV
Sbjct: 79  GWQIVLGTIIGFFGAAFGSVGGVGGGGIFVPMLSLIIGFDPKSATAISKCMIMGAAASTV 138

Query: 135 VYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITVLLIILFIGMSA 194
            YNL+ RHPTLDMP+IDYDL LL QPML+LGISIGVAFNVIFADWM+TVLLIILFIG S 
Sbjct: 139 YYNLKLRHPTLDMPIIDYDLTLLIQPMLMLGISIGVAFNVIFADWMVTVLLIILFIGTST 198

Query: 195 KAFLKGVETWKKETITKVEAAKRLELDRNGDQAEEFKCEPENLSNTTPKETKEPVKSEVS 254
           KAF KGVETWKKETI K EAAKRLE   NG +  E+K  P   S    KE KEP   EV+
Sbjct: 199 KAFFKGVETWKKETIMKKEAAKRLE--ANGAEV-EYKPLPSGPSTGPEKEAKEP---EVT 252

Query: 255 ILKNIYWKELGLLVAVWVIVLALQIAK 281
           +L+N+YWKELGLLV VWV  L L IAK
Sbjct: 253 LLENVYWKELGLLVFVWVAFLILHIAK 279

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518316|ref|XP_003527825.1| PREDICTED: uncharacterized protein LOC100810784 [Glycine max]

 Score =  283 bits (725), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 158/264 (59%), Positives = 191/264 (72%), Gaps = 11/264 (4%)

Query: 24  VASVSVSAQSTLKPEATSANKIDHVEPKNVIKVPTHKI-----RSGYKHVWPDIKFGWKI 78
           V ++  S +S +K E    N     EP+                SGY+HVWPD++FGW+I
Sbjct: 21  VVAIVASERSIMKMEVARFNVTTSREPQQSFLTKALNFLWQSGESGYQHVWPDMEFGWQI 80

Query: 79  VVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKSSVALSKCMITGTAVATVVYNL 138
           VV + +GF GAA GSVGGVGGGGIFVPML+LI+GFD KSS A+SKCMI G AV+TV YNL
Sbjct: 81  VVGTFVGFCGAAFGSVGGVGGGGIFVPMLSLIVGFDQKSSTAISKCMIMGAAVSTVYYNL 140

Query: 139 RQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAFL 198
           + RHPTL+MP+IDYDLALL QPML+LGISIGV FNV+F DW++T+LLI+LF+G S KAF 
Sbjct: 141 KLRHPTLNMPIIDYDLALLIQPMLMLGISIGVVFNVVFPDWIVTILLIVLFLGTSTKAFF 200

Query: 199 KGVETWKKETITKVEAAKRLELDRNGDQAE-EFKCEPENLSNTTPKETKEPVKSEVSILK 257
           KG+ETWKKETI K EAAKR E   NG  AE E+K  P   +    K+TKE    EV+I++
Sbjct: 201 KGIETWKKETIMKKEAAKRQE--SNGSGAEVEYKPLPSGPNGANEKDTKE---QEVTIIE 255

Query: 258 NIYWKELGLLVAVWVIVLALQIAK 281
           N+YWKE GLLV VWV  LALQIAK
Sbjct: 256 NVYWKEFGLLVFVWVSFLALQIAK 279

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143011|ref|XP_002324817.1| predicted protein [Populus trichocarpa] gi|222866251|gb|EEF03382.1| predicted protein [Populus trichocarpa]

 Score =  283 bits (725), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 162/284 (57%), Positives = 204/284 (71%), Gaps = 11/284 (3%)

Query: 1   MSGVGSEWYQWRFSAAAFIGLLLVASVSVSAQSTLKPEATSANKIDHVEPKNVIKVPT-- 58
           M+ +G+++   R +A  F   +L AS  +SA+ ++K   +  ++ + +EP  ++K+ +  
Sbjct: 1   MAFLGAKFLSLRPAAILFFTFML-ASAFISAERSIKHGVSRLSEAEELEPNYLVKIISFL 59

Query: 59  -HKIRSGYKHVWPDIKFGWKIVVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKS 117
                SGY+HVWP++ F W+ V+ +IIGFFGAA GSVGGVGGGGIFVPML LIIGFDPKS
Sbjct: 60  WQSDESGYQHVWPELSFNWQAVIGTIIGFFGAAFGSVGGVGGGGIFVPMLTLIIGFDPKS 119

Query: 118 SVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFA 177
           + A+SKCMI G AV+TV +NLR RHPTLD+PVIDYDL LL QPML+LGISIGV FNVIF 
Sbjct: 120 ATAISKCMIMGAAVSTVYHNLRLRHPTLDLPVIDYDLVLLIQPMLMLGISIGVTFNVIFP 179

Query: 178 DWMITVLLIILFIGMSAKAFLKGVETWKKETITKVEAAKRLELDRNGDQAEEFKCEPENL 237
           DW+ITV LIIL IG S KAF KG++TWK ETI K  AAKR E    G +  E+K  P+  
Sbjct: 180 DWVITVTLIILCIGTSVKAFFKGLDTWKIETILKEVAAKRFE-STGGSEEVEYKPLPDGQ 238

Query: 238 SNTTPKETKEPVKSEVSILKNIYWKELGLLVAVWVIVLALQIAK 281
            N  PK +K      V+IL+NIYWKELGLLV VWV  LA+QIAK
Sbjct: 239 GNDPPKASK------VTILQNIYWKELGLLVFVWVSYLAVQIAK 276

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30682879|ref|NP_850068.1| Sulfite exporter TauE/SafE family protein [Arabidopsis thaliana] gi|22531098|gb|AAM97053.1| unknown protein [Arabidopsis thaliana] gi|25083770|gb|AAN72117.1| unknown protein [Arabidopsis thaliana] gi|26450521|dbj|BAC42374.1| unknown protein [Arabidopsis thaliana] gi|28951043|gb|AAO63445.1| At2g25737 [Arabidopsis thaliana] gi|330252652|gb|AEC07746.1| Sulfite exporter TauE/SafE family protein [Arabidopsis thaliana]

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 164/284 (57%), Positives = 202/284 (71%), Gaps = 8/284 (2%)

Query: 1   MSGVGSEWYQWRFSAAAFIGLLLVASVSVSAQSTLKPEATSANKIDHVEPKNVIKVPTHK 60
           M+ + S+W   R S   F+    +A   VSA+   K    S ++    E    +K     
Sbjct: 1   MTKLRSKWLGLR-SVTIFLINFSLAFAFVSAERRGKSLRLSTDETRENESSFFLKAINFL 59

Query: 61  IRS---GYKHVWPDIKFGWKIVVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKS 117
             S   GY+HVWP+ +F W+IV+ +++GFFGAA GSVGGVGGGGIFVPML+LIIGFDPKS
Sbjct: 60  WESDQIGYRHVWPEFEFNWQIVLGTLVGFFGAAFGSVGGVGGGGIFVPMLSLIIGFDPKS 119

Query: 118 SVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFA 177
           + A+SKCMI G +V+TV YNLR RHPTLDMP+IDYDLALL QPML+LGISIGVAFNVIF 
Sbjct: 120 ATAISKCMIMGASVSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFP 179

Query: 178 DWMITVLLIILFIGMSAKAFLKGVETWKKETITKVEAAKRLELDRNGDQAEEFKCEPENL 237
           DW++TVLLI+LF+G S KAFLKG ETW KETI K EAAKRLE   NG    E +  P   
Sbjct: 180 DWLVTVLLIVLFLGTSTKAFLKGSETWNKETIEKKEAAKRLE--SNGVSGTEVEYVPLPA 237

Query: 238 SNTTPKETKEPVKSEVSILKNIYWKELGLLVAVWVIVLALQIAK 281
           + +T    K+  K EVSI++N+YWKELGLLV VW++ LALQI+K
Sbjct: 238 APSTNPGNKK--KEEVSIIENVYWKELGLLVFVWIVFLALQISK 279

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	302
TAIR|locus:504956017	476	AT2G25737 [Arabidopsis thalian	0.655	0.415	0.603	7.1e-61
TAIR|locus:2040605	459	AT2G36630 [Arabidopsis thalian	0.639	0.420	0.453	1.6e-47
TAIR|locus:2195773	458	AT1G61740 [Arabidopsis thalian	0.536	0.353	0.298	1.4e-19
TAIR|locus:2127343	449	AT4G21250 "AT4G21250" [Arabido	0.592	0.398	0.295	5.7e-17
DICTYBASE|DDB_G0269644	549	DDB_G0269644 [Dictyostelium di	0.519	0.285	0.303	4.2e-16
TAIR|locus:2200061	367	AT1G11540 "AT1G11540" [Arabido	0.337	0.277	0.378	7.4e-13
TAIR|locus:2127348	393	AT4G21260 "AT4G21260" [Arabido	0.314	0.241	0.35	7.7e-10

TAIR|locus:504956017 AT2G25737 [Arabidopsis thaliana (taxid:3702)]

 Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
 Identities = 122/202 (60%), Positives = 148/202 (73%)

Query:    64 GYKHVWPDIKFGWKIVVSSIIXXXXXXXXXXXXXXXXXIFVPMLNLIIGFDPKSSVALSK 123
             GY+HVWP+ +F W+IV+ +++                 IFVPML+LIIGFDPKS+ A+SK
Sbjct:    66 GYRHVWPEFEFNWQIVLGTLVGFFGAAFGSVGGVGGGGIFVPMLSLIIGFDPKSATAISK 125

Query:   124 CMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITV 183
             CMI G +V+TV YNLR RHPTLDMP+IDYDLALL QPML+LGISIGVAFNVIF DW++TV
Sbjct:   126 CMIMGASVSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFPDWLVTV 185

Query:   184 LLIILFIGMSAKAFLKGVETWKKETITKVEAAKRLELDRNGDQAEEFKCEPENLSNTTPK 243
             LLI+LF+G S KAFLKG ETW KETI K EAAKRLE   NG    E +  P   + +T  
Sbjct:   186 LLIVLFLGTSTKAFLKGSETWNKETIEKKEAAKRLE--SNGVSGTEVEYVPLPAAPSTNP 243

Query:   244 ETKEPVKSEVSILKNIYWKELG 265
               K+  K EVSI++N+YWKELG
Sbjct:   244 GNKK--KEEVSIIENVYWKELG 263

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2040605 AT2G36630 [Arabidopsis thaliana (taxid:3702)]

 Score = 472 (171.2 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
 Identities = 93/205 (45%), Positives = 139/205 (67%)

Query:    63 SGYKHVWPDIKFGWKIVVSSIIXXXXXXXXXXXXXXXXXIFVPMLNLIIGFDPKSSVALS 122
             S  + +WPD+KF WK+V++++I                 IFVPML LI+GFD KS+ A+S
Sbjct:    45 SATEKIWPDLKFSWKLVLATVIAFLGSACGTVGGVGGGGIFVPMLTLILGFDTKSAAAIS 104

Query:   123 KCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMIT 182
             KCMI G + ++V YN+R RHPT ++P++DYDLALLFQPML+LGI++GV+ +V+F  W+IT
Sbjct:   105 KCMIMGASASSVWYNVRVRHPTKEVPILDYDLALLFQPMLLLGITVGVSLSVVFPYWLIT 164

Query:   183 VLLIILFIGMSAKAFLKGVETWKKETITKVEAAKRLE--LDRNGDQAEEFKCEPENLSNT 240
             VL+IILF+G S+++F KG+E WK+ET+ K E A++    ++  G+   + + EP      
Sbjct:   165 VLIIILFVGTSSRSFFKGIEMWKEETLLKNEMAQQRANMVNSRGELLIDTEYEP-----L 219

Query:   241 TPKETKEPVKSEVSILK-NIYWKEL 264
              P+E K    SE+ I++ N+ WK L
Sbjct:   220 YPREEK----SELEIIRSNLKWKGL 240

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2195773 AT1G61740 [Arabidopsis thaliana (taxid:3702)]

 Score = 239 (89.2 bits), Expect = 1.4e-19, P = 1.4e-19
 Identities = 49/164 (29%), Positives = 88/164 (53%)

Query:    70 PDIKFGWKIVVSSIIXXXXXXXXXXXXXXXXXIFVPMLNLIIGFDPKSSVALSKCMITGT 129
             P I+     +++ ++                 ++VP++ ++ G D K++ + S  M+TG 
Sbjct:    51 PRIELTTSTIIAGLLSFLASSISSAGGIGGGGLYVPIMTIVAGLDLKTASSFSAFMVTGG 110

Query:   130 AVATVVYNLRQRHPTLD-MPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITVLLIIL 188
             ++A V  NL  R+P      +ID+DLALL +P ++LG+SIGV  N++F +W+IT L  + 
Sbjct:   111 SIANVGCNLFVRNPKSGGKTLIDFDLALLLEPCMLLGVSIGVICNLVFPNWLITSLFAVF 170

Query:   189 FIGMSAKAFLKGVETWKKET-ITKVEAAKRLELDRNGDQAEEFK 231
                 + K F  G+  W+ E+ + K+  + R+E D   D+ E  K
Sbjct:   171 LAWSTLKTFGNGLYYWRLESEMVKIRESNRIEEDDEEDKIESLK 214

GO:0009507 "chloroplast" evidence=ISM

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2127343 AT4G21250 "AT4G21250" [Arabidopsis thaliana (taxid:3702)]

 Score = 215 (80.7 bits), Expect = 5.7e-17, P = 5.7e-17
 Identities = 58/196 (29%), Positives = 96/196 (48%)

Query:    71 DIKFGWKIVVSSIIXXXXXXXXXXXXXXXXXIFVPMLNLIIGFDPKSSVALSKCMITGTA 130
             ++K    I+++ ++                 +F+P++ ++ G D K++ + S  M+TG +
Sbjct:    51 ELKLSSAIIMAGVLCFLAALISSAGGIGGGGLFIPIMTIVAGVDLKTASSFSAFMVTGGS 110

Query:   131 VATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITVLLIILFI 190
             +A V+ NL          ++DYDLALL +P ++LG+SIGV  N +  +W+ITVL  +   
Sbjct:   111 IANVISNLFG-----GKALLDYDLALLLEPCMLLGVSIGVICNRVLPEWLITVLFAVFLA 165

Query:   191 GMSAKAFLKGVETWKKET-ITKVEAAKRLELDRNGDQAEEFKCEPENLSNTTPKETKEPV 249
               S K    GV+ WK E+ I +     R E  R   Q EE   E +NL    P    +  
Sbjct:   166 WSSLKTCRSGVKFWKLESEIARESGHGRPE--RGQGQIEE---ETKNLK--APLLEAQAT 218

Query:   250 KSEVSILKNIYWKELG 265
             K++      I W +LG
Sbjct:   219 KNK----SKIPWTKLG 230

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

DICTYBASE|DDB_G0269644 DDB_G0269644 [Dictyostelium discoideum (taxid:44689)]

 Score = 209 (78.6 bits), Expect = 4.2e-16, P = 4.2e-16
 Identities = 48/158 (30%), Positives = 77/158 (48%)

Query:   102 IFVPMLNLIIGFDPKSSVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPM 161
             I++P+L L+  +DPK+++ LS C++ G A+A  + N  +RHP  +  +IDY +ALL +P+
Sbjct:   160 IYIPILILVSKWDPKTAIPLSNCLVAGCALANFIQNFPRRHPFSNKHLIDYSVALLIEPL 219

Query:   162 LVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAFLKGVETWKKETITKVEAAKRLELD 221
              + G   GV  +  F   +I +LL+I     S K   KG++ WK E   K       + D
Sbjct:   220 TLAGTIFGVYLHTYFPPLVILLLLVITLGFTSYKTISKGIDIWKSEKKKKNSLLSNTD-D 278

Query:   222 RNGDQAEEFKCEPENLSNTTPKETKEPVKSEVSILKNI 259
              N +         +N +N              S  KNI
Sbjct:   279 NNNNNNNNNNNNNKNNNNDNENNNNNNSTGGNSNNKNI 316

GO:0016021 "integral to membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

TAIR|locus:2200061 AT1G11540 "AT1G11540" [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 7.4e-13, P = 7.4e-13
 Identities = 39/103 (37%), Positives = 60/103 (58%)

Query:   107 LNLIIGFDPKSSVALSKCMITGTAVATVVYNLRQRHP-TLDMPVIDYDLALLFQPMLVLG 165
             + +I G + K++ + S  M+TG + A V  NL  R+P + D  +ID+DLAL  QP L+LG
Sbjct:     1 MTIIAGLEMKTASSFSAFMVTGVSFANVGCNLFLRNPKSRDKTLIDFDLALTIQPCLLLG 60

Query:   166 ISIGVAFNVIFADWMITVLLIILFIGMSAKAFLKGVETWKKET 208
             +SIGV  N +F +W++  L  +     + K   KGV  W  E+
Sbjct:    61 VSIGVICNRMFPNWLVLFLFAVFLAWSTMKTCKKGVSYWNLES 103

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2127348 AT4G21260 "AT4G21260" [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 7.7e-10, P = 7.7e-10
 Identities = 35/100 (35%), Positives = 58/100 (58%)

Query:   112 GFDPKSSVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVA 171
             G D K++ + S  M+TG ++A ++ N    H      +IDYDLALL +P ++LG+S+GV 
Sbjct:    80 GIDLKAASSFSAFMVTGGSIANLINN----HFGCKK-LIDYDLALLLEPCMLLGVSVGVI 134

Query:   172 FNVIFADWMITVLLIILFIGMSAKAFLKGVETWKKETITK 211
              N +F +W+IT L ++  +  S +    G  +WK   I +
Sbjct:   135 CNKVFPEWLITGLFVVFLMWSSMETCENGHTSWKLSLILR 174


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.137   0.415    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      302       259   0.00088  114 3  11 22  0.43    33
                                                     32  0.49    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  620 (66 KB)
  Total size of DFA:  208 KB (2115 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.95u 0.14s 20.09t   Elapsed:  00:00:01
  Total cpu time:  19.95u 0.14s 20.09t   Elapsed:  00:00:01
  Start:  Sat May 11 07:54:08 2013   End:  Sat May 11 07:54:09 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00034374001 SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (481 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	302
pfam01925	236	pfam01925, TauE, Sulfite exporter TauE/SafE	1e-09
COG0730	258	COG0730, COG0730, Predicted permeases [General fun	1e-07
pfam01925	236	pfam01925, TauE, Sulfite exporter TauE/SafE	4e-07
COG0730	258	COG0730, COG0730, Predicted permeases [General fun	2e-06

>gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE

 Score = 57.2 bits (139), Expect = 1e-09
 Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 8/117 (6%)

Query: 83  IIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKSSVALSKCMITGTAVATVVYNLRQRH 142
           + G        + G GGG I VP+L L++   P  +V  S   +  T+++  + + R+ +
Sbjct: 3   LAGLLAGFLAGLAGFGGGLIAVPLL-LLLLGPPHVAVGTSLLAVIATSLSGALAHRRRGN 61

Query: 143 PTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAFLK 199
                  +D+ L L      +LG  +G    ++    ++ +L  +L +  +    L+
Sbjct: 62  -------VDWRLLLRLLLGGLLGALLGALLLLLLPGAVLKLLFGVLLLLAALLMLLR 111

This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81. Length = 236

>gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only]

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 23/140 (16%), Positives = 63/140 (45%), Gaps = 8/140 (5%)

Query: 78  IVVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKSSVALSKCMITGTAVATVVYN 137
           +++  ++G        + G GGG + VP L L++G  P +++  S   +  T++++ +  
Sbjct: 7   LLLLFLVGLLAGFISGLAGGGGGLLTVPAL-LLLGLPPAAALGTSLLAVLFTSLSSALAY 65

Query: 138 LRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAF 197
           L++ +       +D+ LAL+     ++G  +G    ++    ++ +L  +L + ++    
Sbjct: 66  LKRGN-------VDWKLALILLLGALIGAFLGALLALLLPAELLKLLFGLLLLLLALYML 118

Query: 198 LKGVETWKKETITKVEAAKR 217
           L       ++   ++     
Sbjct: 119 LGPRLAKAEDRAARLRPLLF 138

Length = 258

>gnl|CDD|216790 pfam01925, TauE, Sulfite exporter TauE/SafE

 Score = 49.5 bits (119), Expect = 4e-07
 Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 7/130 (5%)

Query: 66  KHVWPDIKFGWKIVVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKSSVALSKCM 125
           K      +     +   + G        + G+GGG + VP L  ++G   K +VA S  +
Sbjct: 113 KLGAEASRRPPGPLGLLLAGGLVGFLSGLFGIGGGFLLVPALLYLLGLPLKKAVATSLAV 172

Query: 126 ITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFADWMITVLL 185
              +++A ++              +D+ L LL  P  +LG  +G          ++  L 
Sbjct: 173 FLVSSLAALLGYALAGL-------VDWPLLLLLLPGALLGALLGARLARRLPPRLLRRLF 225

Query: 186 IILFIGMSAK 195
            +L + +  K
Sbjct: 226 AVLLLLVGLK 235

This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81. Length = 236

>gnl|CDD|223802 COG0730, COG0730, Predicted permeases [General function prediction only]

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 33/142 (23%), Positives = 55/142 (38%), Gaps = 6/142 (4%)

Query: 59  HKIRSGYKHVWPDIKFGWKIVVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKSS 118
              R                 ++ +IGF       + GVGGG   VP L L++    K +
Sbjct: 119 LGPRLAKAEDRAARLRPLLFALALLIGFLAGFLSGLFGVGGGFGIVPALLLLLLLPLKLA 178

Query: 119 VALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIGVAFNVIFAD 178
           VA S  +I  TA       L        +  +D+ LALL     +LG  +G       + 
Sbjct: 179 VATSLAIILNTASNGAALYL------FALGAVDWPLALLLAVGSILGAYLGARLARRLSP 232

Query: 179 WMITVLLIILFIGMSAKAFLKG 200
            ++  L  ++ + ++ K  L+G
Sbjct: 233 KVLRRLFALVLLAVAIKLLLRG 254

Length = 258

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	302
COG0730	258	Predicted permeases [General function prediction o	99.59
PRK10621	266	hypothetical protein; Provisional	99.58
PRK10621	266	hypothetical protein; Provisional	99.55
COG0730	258	Predicted permeases [General function prediction o	99.49
PF01925	240	TauE: Sulfite exporter TauE/SafE; InterPro: IPR002	99.43
PF01925	240	TauE: Sulfite exporter TauE/SafE; InterPro: IPR002	99.36
KOG2881	294	consensus Predicted membrane protein [Function unk	88.96
PF11833	194	DUF3353: Protein of unknown function (DUF3353); In	88.75
COG2119	190	Predicted membrane protein [Function unknown]	86.25
TIGR02840	206	spore_YtaF putative sporulation protein YtaF. This	82.2

>COG0730 Predicted permeases [General function prediction only]

Probab=99.59  E-value=3.1e-14  Score=131.14  Aligned_cols=118  Identities=19%  Similarity=0.389  Sum_probs=109.8

Q ss_pred             HHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHhCCChhhHHhhhHHHHHHHHHHHHHHHHHhcCCCCCCCcccHHHHH
Q 022146           77 KIVVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKSSVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLAL  156 (302)
Q Consensus        77 ~~ll~~liGflaG~isgl~GIGGG~I~VPiL~l~~glp~k~AvatS~~~i~~~s~s~~~~~~~~~~p~~~~p~Id~~lal  156 (302)
                      ..++.+++|+++|+++|++|+|||.+.+|.|.. +++|+++|.+++++....+++++.+.|.++++       +||+.+.
T Consensus         6 ~~~~~~~~g~l~g~i~g~~G~Ggg~i~~P~L~~-~~~~~~~a~~t~l~~~~~~~~~~~~~~~k~~~-------v~~~~~~   77 (258)
T COG0730           6 TLLLLFLVGLLAGFISGLAGGGGGLLTVPALLL-LGLPPAAALGTSLLAVLFTSLSSALAYLKRGN-------VDWKLAL   77 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC-------ccHHHHH
Confidence            356677899999999999999999999999998 45999999999999999999999998888886       9999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhhhh
Q 022146          157 LFQPMLVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAFLKGVE  202 (302)
Q Consensus       157 ~l~~g~llGa~IGa~l~~~lp~~~L~~lf~ilLl~~~i~~l~kg~~  202 (302)
                      .+.+++++|+.+|+.+...+|++.++.++.+++++.+.+++++...
T Consensus        78 ~l~~~~~~G~~lG~~l~~~~~~~~l~~~~~~~ll~~~~~~~~~~~~  123 (258)
T COG0730          78 ILLLGALIGAFLGALLALLLPAELLKLLFGLLLLLLALYMLLGPRL  123 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            9999999999999999999999999999999999999999987643

>PRK10621 hypothetical protein; Provisional

Probab=99.58  E-value=4.6e-14  Score=131.22  Aligned_cols=113  Identities=22%  Similarity=0.343  Sum_probs=104.0

Q ss_pred             HHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHhCCChhhHHhhhHHHHHHHHHHHHHHHHHhcCCCCCCCcccHHHHHH
Q 022146           78 IVVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKSSVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALL  157 (302)
Q Consensus        78 ~ll~~liGflaG~isgl~GIGGG~I~VPiL~l~~glp~k~AvatS~~~i~~~s~s~~~~~~~~~~p~~~~p~Id~~lal~  157 (302)
                      ..+.+++|+++|+++|+.| |||.+.+|+|.. +|+|+++|++||.+.++.+++++.+.|.+++|       +||+.+..
T Consensus        12 ~~~l~~~g~~aG~l~gl~G-GGg~i~vP~L~~-~g~~~~~Av~tsl~~~~~~~~~~~~~~~~~~~-------v~~~~~~~   82 (266)
T PRK10621         12 LGVLFFVAMLAGFIDSIAG-GGGLLTIPALLA-AGMSPAQALATNKLQACGGSFSASLYFIRRKV-------VNLADQKL   82 (266)
T ss_pred             HHHHHHHHHHHHHHhhhcc-ccHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC-------CCHHHHHH
Confidence            3456668999999999999 999999999974 79999999999999999999999998888886       99999999


Q ss_pred             HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHh
Q 022146          158 FQPMLVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAFLK  199 (302)
Q Consensus       158 l~~g~llGa~IGa~l~~~lp~~~L~~lf~ilLl~~~i~~l~k  199 (302)
                      +.+++++|+.+|+.+...+|++.++.+++++++.++.+++++
T Consensus        83 l~~~~l~Ga~~G~~l~~~l~~~~l~~~~~~~ll~~~~~~l~~  124 (266)
T PRK10621         83 NIAMTFVGSMSGALLVQYVQADILRQILPILVIGIGLYFLLM  124 (266)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999999999999999999999999888765

>PRK10621 hypothetical protein; Provisional

Probab=99.55  E-value=9.9e-14  Score=128.99  Aligned_cols=115  Identities=16%  Similarity=0.212  Sum_probs=105.8

Q ss_pred             HHHHHHHHHHHHhhcccchHHHHHHHHHHHhCCChhhHHhhhHHHHHHHHHHHHHHHHHhcCCCCCCCcccHHHHHHHHH
Q 022146           81 SSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKSSVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQP  160 (302)
Q Consensus        81 ~~liGflaG~isgl~GIGGG~I~VPiL~l~~glp~k~AvatS~~~i~~~s~s~~~~~~~~~~p~~~~p~Id~~lal~l~~  160 (302)
                      ..++|+++|+++|++|+|||.+++|.+..++++|+++|++++.++.+.++++++..+...++       +||..++.+.+
T Consensus       142 ~~~~G~~~G~lsG~~G~GgG~~~v~~l~~~~~~~~~~a~~ts~~~~~~~~~~~~~~~~~~G~-------v~~~~~l~l~~  214 (266)
T PRK10621        142 ALIAGGCVGFYDGFFGPGAGSFYALAFVTLCGFNLAKATAHAKVLNATSNIGGLLLFILGGK-------VIWATGFVMLV  214 (266)
T ss_pred             HHHHHHHHHHHhcccchhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCe-------ehHHHHHHHHH
Confidence            34679999999999999999999999988899999999999999888888888877766664       89999999999


Q ss_pred             HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhhhh
Q 022146          161 MLVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAFLKGVE  202 (302)
Q Consensus       161 g~llGa~IGa~l~~~lp~~~L~~lf~ilLl~~~i~~l~kg~~  202 (302)
                      ++++|+.+|++++++++++.+|.++..+++.++++++++.+.
T Consensus       215 g~~~G~~lG~~l~~~~~~~~lr~~~~~ll~~~~i~~~~~~~~  256 (266)
T PRK10621        215 GQFLGARLGARLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHG  256 (266)
T ss_pred             HHHHHHHHHHHHHHHcCchHhHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999988766

>COG0730 Predicted permeases [General function prediction only]

Probab=99.49  E-value=9.4e-13  Score=121.34  Aligned_cols=116  Identities=28%  Similarity=0.405  Sum_probs=105.6

Q ss_pred             HHHHHHHHHHHHHHhhcccchHHHHHHHHHHHhCCChhhHHhhhHHHHHHHHHHHHHHHHH-hcCCCCCCCcccHHHHHH
Q 022146           79 VVSSIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKSSVALSKCMITGTAVATVVYNLR-QRHPTLDMPVIDYDLALL  157 (302)
Q Consensus        79 ll~~liGflaG~isgl~GIGGG~I~VPiL~l~~glp~k~AvatS~~~i~~~s~s~~~~~~~-~~~p~~~~p~Id~~lal~  157 (302)
                      .....+|+++|+++|++|+|||...+|.+....+.|.+.+++||.+.++.++..+...+.. .++       +||..+..
T Consensus       139 ~~~~~~g~~~G~~sG~~G~GgG~~~vp~l~~~~~~~~~~~~~ts~~~~~~~~~~~~~~~~~~~g~-------~~~~~~~~  211 (258)
T COG0730         139 ALALLIGFLAGFLSGLFGVGGGFGIVPALLLLLLLPLKLAVATSLAIILNTASNGAALYLFALGA-------VDWPLALL  211 (258)
T ss_pred             HHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHhcCc-------ccHHHHHH
Confidence            3455788999999999999999999999999999999999999999999888887777666 564       99999988


Q ss_pred             HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhhh
Q 022146          158 FQPMLVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAFLKGV  201 (302)
Q Consensus       158 l~~g~llGa~IGa~l~~~lp~~~L~~lf~ilLl~~~i~~l~kg~  201 (302)
                      +.+++++|+++|+++.++++++.+|.++.++++.++.+++++..
T Consensus       212 l~~g~~~G~~lG~~l~~~~~~~~lr~~~~~~~~~~~~~~~~~~~  255 (258)
T COG0730         212 LAVGSILGAYLGARLARRLSPKVLRRLFALVLLAVAIKLLLRGL  255 (258)
T ss_pred             HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999987754

>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised

Probab=99.43  E-value=1.5e-12  Score=117.52  Aligned_cols=110  Identities=25%  Similarity=0.422  Sum_probs=102.6

Q ss_pred             HHHHHHHHHHHhhcccchHHHHHHHHHHHhCCChhhHHhhhHHHHHHHHHHHHHHHHHhcCCCCCCCcccHHHHHHHHHH
Q 022146           82 SIIGFFGAACGSVGGVGGGGIFVPMLNLIIGFDPKSSVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLALLFQPM  161 (302)
Q Consensus        82 ~liGflaG~isgl~GIGGG~I~VPiL~l~~glp~k~AvatS~~~i~~~s~s~~~~~~~~~~p~~~~p~Id~~lal~l~~g  161 (302)
                      +++++++|++.|+.|.|||.+.+|+|.. + +|+++|++++.+..+.++..+.+.+.++++       +||+....+.++
T Consensus         2 ~~~~~~ag~v~g~~G~g~g~i~~p~l~~-~-l~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-------i~~~~~~~~~~~   72 (240)
T PF01925_consen    2 LLIGFLAGFVSGITGFGGGLIAVPILIL-F-LPPKQAVATSLFINLFTSLIAALRHRKHGN-------IDWKIVLPLIIG   72 (240)
T ss_pred             HHHHHHHHHHHHHHcccHHHHHHHHHHH-H-cCHHHHHHHHHHHHHHHHHHHHHHHHHccc-------cchhhhhhhhhH
Confidence            4679999999999999999999999998 4 899999999999999999999888877764       999999999999


Q ss_pred             HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhh
Q 022146          162 LVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAFLKG  200 (302)
Q Consensus       162 ~llGa~IGa~l~~~lp~~~L~~lf~ilLl~~~i~~l~kg  200 (302)
                      +++|+.+|+.+...+|++.++.++.++++..+.+++++.
T Consensus        73 ~~~g~~iG~~l~~~l~~~~l~~~~~~~ll~~~~~~~~~~  111 (240)
T PF01925_consen   73 ALIGVVIGAWLLSLLPDDILKLIFGLFLLLLAIYMLLKK  111 (240)
T ss_pred             hHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999998754

; GO: 0016021 integral to membrane

>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised

Probab=99.36  E-value=1e-11  Score=112.20  Aligned_cols=112  Identities=24%  Similarity=0.359  Sum_probs=99.1

Q ss_pred             HHHHHHHHHH-HHHHHhhcccchHHHHHHHHHHHhCCChhhHHhhhHHHHHHHHHHHHHHHHHhcCCCCCCCcccHHHHH
Q 022146           78 IVVSSIIGFF-GAACGSVGGVGGGGIFVPMLNLIIGFDPKSSVALSKCMITGTAVATVVYNLRQRHPTLDMPVIDYDLAL  156 (302)
Q Consensus        78 ~ll~~liGfl-aG~isgl~GIGGG~I~VPiL~l~~glp~k~AvatS~~~i~~~s~s~~~~~~~~~~p~~~~p~Id~~lal  156 (302)
                      .+....+|++ +|+++|++|+|||.+.+|++....++|++++.+|+.++.+.++.++...|...+       .+||+...
T Consensus       125 ~~~~~~~g~~~~G~~~G~~g~ggg~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~~~~~~~~~g-------~~~~~~~~  197 (240)
T PF01925_consen  125 RWLLFLLGGLFIGFLSGLFGIGGGPLLVPLLLYLFGLDPKKARATSAFFFFFSSVAALISFLILG-------DVDWPMLL  197 (240)
T ss_pred             hhhhhhhhHHHhhHHHhhhhccccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------cccHHHHH
Confidence            3334455555 999999999999999999999878999999999999999999998888777766       48898776


Q ss_pred             H---HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Q 022146          157 L---FQPMLVLGISIGVAFNVIFADWMITVLLIILFIGMSAKA  196 (302)
Q Consensus       157 ~---l~~g~llGa~IGa~l~~~lp~~~L~~lf~ilLl~~~i~~  196 (302)
                      .   +.+++++|+.+|.++.+++|++.+|.++.++++.++++|
T Consensus       198 ~~~~~~~~~~~G~~lG~~~~~~i~~~~~~~~~~~ll~~~~~~l  240 (240)
T PF01925_consen  198 LSLILLPGAFLGAFLGAKLARKIPQKVFRRIFLILLLLSGLKL  240 (240)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHC
Confidence            6   999999999999999999999999999999999988764

; GO: 0016021 integral to membrane

>KOG2881 consensus Predicted membrane protein [Function unknown]

Probab=88.96  E-value=2.3  Score=40.49  Aligned_cols=51  Identities=22%  Similarity=0.211  Sum_probs=40.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Q 022146          157 LFQPMLVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAFLKGVETWKKE  207 (302)
Q Consensus       157 ~l~~g~llGa~IGa~l~~~lp~~~L~~lf~ilLl~~~i~~l~kg~~~~k~E  207 (302)
                      .+.++.++.+.+|-..-..+|.++-..+-.+++++.|+||++.+.+.-..|
T Consensus       108 AL~lMTiLS~~lG~aap~lipr~~T~~~~t~LF~iFGlkmL~eg~~~~~~~  158 (294)
T KOG2881|consen  108 ALALMTILSVLLGWAAPNLIPRKYTYYLATALFLIFGLKMLKEGWEMSPSE  158 (294)
T ss_pred             HHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Confidence            366788888999977767888777777778888899999999986654443

>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised

Probab=88.75  E-value=8.3  Score=34.88  Aligned_cols=43  Identities=14%  Similarity=0.091  Sum_probs=25.8

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhchH---------HHHHHHHHHHHHHHH
Q 022146          151 DYDLALLFQPMLVLGISIGVAFNVIFAD---------WMITVLLIILFIGMS  193 (302)
Q Consensus       151 d~~lal~l~~g~llGa~IGa~l~~~lp~---------~~L~~lf~ilLl~~~  193 (302)
                      -++..++-..+.++|..+|..+...++.         ..+..++.+++++++
T Consensus       139 ~~rA~~~~~~~L~~G~~lGs~l~~~l~~~~~p~~~s~~~~~sl~~~i~lwl~  190 (194)
T PF11833_consen  139 LGRAFLWTLGGLVVGLILGSLLASWLPVDIVPGPWSPEQLVSLFTYILLWLV  190 (194)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCCHHHHHHHHHHHHHHHH
Confidence            3556666666677777777777766643         344555555554444

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.

>COG2119 Predicted membrane protein [Function unknown]

Probab=86.25  E-value=4.7  Score=36.43  Aligned_cols=53  Identities=11%  Similarity=0.133  Sum_probs=46.3

Q ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhhh
Q 022146          149 VIDYDLALLFQPMLVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAFLKGV  201 (302)
Q Consensus       149 ~Id~~lal~l~~g~llGa~IGa~l~~~lp~~~L~~lf~ilLl~~~i~~l~kg~  201 (302)
                      .|-....+-+.+++++++..|-+++.++|.+.++.+-++++++.+...++...
T Consensus       134 ~V~~Gt~lg~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal~~~~~~~  186 (190)
T COG2119         134 AVFAGTTLGMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFALVLLWQVF  186 (190)
T ss_pred             eeehhhHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35556777899999999999999999999999999999999999988887653

>TIGR02840 spore_YtaF putative sporulation protein YtaF

Probab=82.20  E-value=4.3  Score=36.80  Aligned_cols=50  Identities=8%  Similarity=0.177  Sum_probs=40.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhhhh
Q 022146          153 DLALLFQPMLVLGISIGVAFNVIFADWMITVLLIILFIGMSAKAFLKGVE  202 (302)
Q Consensus       153 ~lal~l~~g~llGa~IGa~l~~~lp~~~L~~lf~ilLl~~~i~~l~kg~~  202 (302)
                      ..++.-..+..+|-.+|..+..+++.++-.++=.++|++++.+|++++++
T Consensus        35 ~ig~~~~~~~~lg~~~G~~~~~~i~~~~~~~ig~~iLi~iG~~mi~~~~~   84 (206)
T TIGR02840        35 IIAVISGLFIFISMLLGKFLAKFLPPKVTEILGAFILIAIGIWIIYNAFR   84 (206)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHHh
Confidence            34444556778888888888999988877888888999999999998865

This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	302
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 7e-04
 Identities = 25/168 (14%), Positives = 49/168 (29%), Gaps = 46/168 (27%)

Query: 113 FDPKSSVALSKCMITGT---AVATVVYNLRQRHPTLDMPVIDYDLALLFQPMLVLGISIG 169
           F+        K ++T T    V   +      H +LD        ++   P  V  +   
Sbjct: 262 FNLSC-----KILLT-TRFKQVTDFLSAATTTHISLD------HHSMTLTPDEVKSL--- 306

Query: 170 VAFNVIFADWM-------------ITVLLIILFIGMSAKAFLKGVETWKKETITKVEAAK 216
                    ++                  + + I  S +  L   + WK     K+    
Sbjct: 307 ------LLKYLDCRPQDLPREVLTTNPRRLSI-IAESIRDGLATWDNWKHVNCDKLTTI- 358

Query: 217 RLELDRNGDQAEEFKCEPENLSNTTPKETKEPVKSEVSILKNIYWKEL 264
            +E   N  +  E++   + LS   P     P      +L  + W ++
Sbjct: 359 -IESSLNVLEPAEYRKMFDRLS-VFPPSAHIPTI----LLS-LIWFDV 399

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00