Citrus Sinensis ID: 022152


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300--
MSMGSDTGSTWVGKKPLRRIGGMSDALSIAADLGFSVAPPPSQEELQNLCANGEKGDDLIRVLRELTAVQRKIADLQVELQGRKDDKNVAHLTHVSEMQKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTASVADFQWSQSFKEPPSIWGEMLRPIPVALASCTRFFEAMSAMRESFATLQHLRVGDSASSLPITPDNNSSQRVPGGSDCVTPPPWTNESSLDDLVIRNLRRQELGRQEAEDAISEVSDLSQSDGTNNRRLSWPLQVKKSGT
cccccccccccccccHHHHcccHHHHHHHHHHHcccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccc
ccccccccccccccccHHHcccHHHHHHHHHHccccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcEEEEcccccccccHcHccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHcccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccHHHHHccccccccccccccccccEcccccccccccc
msmgsdtgstwvgkkplrriggmSDALSIAAdlgfsvapppsqEELQNLCANGEKGDDLIRVLRELTAVQRKIADLQVELqgrkddknvaHLTHVSEMQKKIETLSRITTILKDVIQNKDRIIARLqqpysldcipVEAEYQKQFSELLMKAASDYGAltasvadfqwsqsfkeppsiwgemlrpiPVALASCTRFFEAMSAMRESFATLQHlrvgdsasslpitpdnnssqrvpggsdcvtpppwtnessldDLVIRNLRRQELGRQEAEDAISEvsdlsqsdgtnnrrlswplqvkksgt
msmgsdtgstwvgkkplrRIGGMSDALSIAADLGFSVAPPPSQEELQNLCANGEKGDDLIRVLRELTAVQRKIADLqvelqgrkddknvahlthvsemqkkietLSRITTILKDVIQNKDRIIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTASVADFQWSQSFKEPPSIWGEMLRPIPVALASCTRFFEAMSAMRESFATLQHLRVGDSASslpitpdnnssqrvpggsDCVTpppwtnesslddlVIRNLRRQELGRQEAEDaisevsdlsqsdgtnnrrlswplqvkksgt
MSMGSDTGSTWVGKKPLRRIGGMSDALSIAADLGFSVAPPPSQEELQNLCANGEKGDDLIRVLRELTAVQRKIADLQVELQGRKDDKNVAHLTHVSEMQKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTASVADFQWSQSFKEPPSIWGEMLRPIPVALASCTRFFEAMSAMRESFATLQHLRVGDSASSLPITPDNNSSQRVPGGSDCVTPPPWTNESSLDDLVIRNLRRQELGRQEAEDAISEVSDLSQSDGTNNRRLSWPLQVKKSGT
*************************ALSIAADLGF*************LCANGEKGDDLIRVLRELTAVQRKIADLQVELQGR***KNVAHLTHVSEMQKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTASVADFQWSQSFKEPPSIWGEMLRPIPVALASCTRFFEAMSAMRESFATLQHL*****************************************************************************************
**************KPLRRIGGMSDALSIAADLGF***********************LIRVLRELTAVQRKIADLQVELQGRKDDKNVAHLTHVSEMQKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTASVADFQWSQSFKEPPSIWGEMLRPIPVALASCTRFFEAMSAMRESFAT****************************SDCVTPPPWTNESSLDDLVI*********************************************
***********VGKKPLRRIGGMSDALSIAADLGFSVAPPPSQEELQNLCANGEKGDDLIRVLRELTAVQRKIADLQVELQGRKDDKNVAHLTHVSEMQKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTASVADFQWSQSFKEPPSIWGEMLRPIPVALASCTRFFEAMSAMRESFATLQHLRVGDSASSLPITP************DCVTPPPWTNESSLDDLVIRNLRRQELG*******************TNNRRLSWPLQVKKSGT
**************K********SDALSIAADLGFSVAPPPSQEELQNLCANGEKGDDLIRVLRELTAVQRKIADLQVELQGRKDDKNVAHLTHVSEMQKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTASVADFQWSQSFKEPPSIWGEMLRPIPVALASCTRFFEAMSAMRESFATL*HL*************************DCVTPPPWTNESSLDDLVIRNLRRQEL*************************************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSMGSDTGSTWVGKKPLRRIGGMSDALSIAADLGFSVAPPPSQEELQNLCANGEKGDDxxxxxxxxxxxxxxxxxxxxxLQGRKDDKNVAHLTHVSEMQKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTASVADFQWSQSFKEPPSIWGEMLRPIPVALASCTRFFEAMSAMRESFATLQHLRVGDSASSLPITPDNNSSQRVPGGSDCVTPPPWTNESSLDDLVIRNLRRQELGRQEAEDAISEVSDLSQSDGTNNRRLSWPLQVKKSGT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query302
225447131300 PREDICTED: uncharacterized protein LOC10 0.990 0.996 0.837 1e-145
449466073301 PREDICTED: uncharacterized protein LOC10 0.990 0.993 0.834 1e-140
224068945292 predicted protein [Populus trichocarpa] 0.960 0.993 0.811 1e-133
255568721280 conserved hypothetical protein [Ricinus 0.920 0.992 0.846 1e-133
297739208274 unnamed protein product [Vitis vinifera] 0.903 0.996 0.787 1e-133
224129026292 predicted protein [Populus trichocarpa] 0.960 0.993 0.781 1e-128
297789866292 hypothetical protein ARALYDRAFT_497273 [ 0.956 0.989 0.787 1e-126
297826747291 hypothetical protein ARALYDRAFT_345055 [ 0.953 0.989 0.780 1e-126
356575889273 PREDICTED: uncharacterized protein LOC10 0.880 0.974 0.828 1e-125
297801306 1370 hypothetical protein ARALYDRAFT_355725 [ 0.827 0.182 0.862 1e-125
>gi|225447131|ref|XP_002274696.1| PREDICTED: uncharacterized protein LOC100244748 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  520 bits (1338), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 252/301 (83%), Positives = 274/301 (91%), Gaps = 2/301 (0%)

Query: 1   MSMGSDTGSTWVGKKPLRRIGGMSDALSIAADLGFSVAPPPSQEELQNLCANGEKGDDLI 60
           MSMGSDT  +WVGKKPLRR+GGMSDALSIAADLGFSV PPPSQEELQNL + GEKGDDLI
Sbjct: 1   MSMGSDT--SWVGKKPLRRLGGMSDALSIAADLGFSVNPPPSQEELQNLSSTGEKGDDLI 58

Query: 61  RVLRELTAVQRKIADLQVELQGRKDDKNVAHLTHVSEMQKKIETLSRITTILKDVIQNKD 120
           RVLRELT VQRKIADLQVELQGRK+DKNVAHLTHVSEM+KK ETL+RIT ILKDVIQNKD
Sbjct: 59  RVLRELTTVQRKIADLQVELQGRKEDKNVAHLTHVSEMEKKCETLARITAILKDVIQNKD 118

Query: 121 RIIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTASVADFQWSQSFKEPPSIWG 180
           RIIARLQQPYSLDCIPVEAE+QKQFSELLMKAASDYGALTASVADFQW+Q+FKEPPS+WG
Sbjct: 119 RIIARLQQPYSLDCIPVEAEFQKQFSELLMKAASDYGALTASVADFQWTQNFKEPPSVWG 178

Query: 181 EMLRPIPVALASCTRFFEAMSAMRESFATLQHLRVGDSASSLPITPDNNSSQRVPGGSDC 240
           EMLRPIPVALASCTRFFEAMSAMRESFATLQ+LRVG+SASSLP TP  +  QR+PG S+C
Sbjct: 179 EMLRPIPVALASCTRFFEAMSAMRESFATLQNLRVGNSASSLPTTPAKDPYQRIPGDSEC 238

Query: 241 VTPPPWTNESSLDDLVIRNLRRQELGRQEAEDAISEVSDLSQSDGTNNRRLSWPLQVKKS 300
           VTPPPW NE S DDL +R++RRQE  RQE ED  SEV +L+Q DGT++RRLSWP  VKKS
Sbjct: 239 VTPPPWRNEPSFDDLAVRSVRRQENERQEVEDENSEVGELNQVDGTSHRRLSWPPSVKKS 298

Query: 301 G 301
           G
Sbjct: 299 G 299




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449466073|ref|XP_004150751.1| PREDICTED: uncharacterized protein LOC101204893 [Cucumis sativus] Back     alignment and taxonomy information
>gi|224068945|ref|XP_002302863.1| predicted protein [Populus trichocarpa] gi|222844589|gb|EEE82136.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255568721|ref|XP_002525332.1| conserved hypothetical protein [Ricinus communis] gi|223535391|gb|EEF37065.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|297739208|emb|CBI28859.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224129026|ref|XP_002320482.1| predicted protein [Populus trichocarpa] gi|222861255|gb|EEE98797.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297789866|ref|XP_002862858.1| hypothetical protein ARALYDRAFT_497273 [Arabidopsis lyrata subsp. lyrata] gi|297308610|gb|EFH39116.1| hypothetical protein ARALYDRAFT_497273 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297826747|ref|XP_002881256.1| hypothetical protein ARALYDRAFT_345055 [Arabidopsis lyrata subsp. lyrata] gi|297327095|gb|EFH57515.1| hypothetical protein ARALYDRAFT_345055 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356575889|ref|XP_003556069.1| PREDICTED: uncharacterized protein LOC100816472 [Glycine max] Back     alignment and taxonomy information
>gi|297801306|ref|XP_002868537.1| hypothetical protein ARALYDRAFT_355725 [Arabidopsis lyrata subsp. lyrata] gi|297314373|gb|EFH44796.1| hypothetical protein ARALYDRAFT_355725 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query302
TAIR|locus:2059390296 AUG2 "augmin subunit 2" [Arabi 0.970 0.989 0.780 3e-117
TAIR|locus:2059390 AUG2 "augmin subunit 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1155 (411.6 bits), Expect = 3.0e-117, P = 3.0e-117
 Identities = 235/301 (78%), Positives = 252/301 (83%)

Query:     1 MSMGSDTGSTWVGKKPLRRIGGMSDALSIAADLGFSVAPPPSQEELQNLCA-NGEKGDDL 59
             MSMG DT  TWVGKKP+RRIGG+SDALSIA+DLGF+VAPPPSQEELQ+  + NGE+GDDL
Sbjct:     1 MSMGGDT--TWVGKKPIRRIGGLSDALSIASDLGFAVAPPPSQEELQSFASSNGERGDDL 58

Query:    60 IRVLRELTAVQRKIADLQVELQGRKDDKNVAHLTHVSEMQKKIETLSRITTILKDVIQNK 119
             IRVLREL+ VQRKIADLQVELQGRKDDKNVAHLTHV EMQKKIETLSRIT ILKDVIQNK
Sbjct:    59 IRVLRELSVVQRKIADLQVELQGRKDDKNVAHLTHVGEMQKKIETLSRITQILKDVIQNK 118

Query:   120 DRIIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTASVADFQWSQSFKEPPSIW 179
             DRIIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTASV+DFQWSQ+FKEPPS+W
Sbjct:   119 DRIIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTASVSDFQWSQNFKEPPSVW 178

Query:   180 GEMLRPIPVALASCTRFFEAMSAMRESFATLQHLRVGDSASSLPITPDNNSSQRVPGGSD 239
             GEMLRPIPVALASCTRFFEAMSAMRESFATLQ LRVG+SA SLP TP  N  +     SD
Sbjct:   179 GEMLRPIPVALASCTRFFEAMSAMRESFATLQELRVGNSAVSLPTTPGGN--EMTHRDSD 236

Query:   240 CVTPPPWTNESSLDDLVIRNLRRQELGRQEAEDAISEVSDLSQSDGTNNRRLSWPLQVKK 299
             CVTPP    ESS DDL +   RRQ   + E E+   E  D    +   NRRLSWP  VKK
Sbjct:   237 CVTPPQGRIESSFDDLAVHKTRRQNNDQNEEEEEEEEEED---GNNNGNRRLSWPPSVKK 293

Query:   300 S 300
             S
Sbjct:   294 S 294


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.129   0.372    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      302       302   0.00097  115 3  11 23  0.44    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  204 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.22u 0.12s 29.34t   Elapsed:  00:00:01
  Total cpu time:  29.22u 0.12s 29.34t   Elapsed:  00:00:01
  Start:  Sat May 11 08:04:46 2013   End:  Sat May 11 08:04:47 2013


GO:0005634 "nucleus" evidence=ISM
GO:0000910 "cytokinesis" evidence=IMP
GO:0005515 "protein binding" evidence=IPI
GO:0007020 "microtubule nucleation" evidence=IMP
GO:0007067 "mitosis" evidence=IMP

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 302
PF15003277 HAUS2: HAUS augmin-like complex subunit 2 100.0
PF15003277 HAUS2: HAUS augmin-like complex subunit 2 81.74
>PF15003 HAUS2: HAUS augmin-like complex subunit 2 Back     alignment and domain information
Probab=100.00  E-value=5.1e-92  Score=651.29  Aligned_cols=270  Identities=36%  Similarity=0.546  Sum_probs=259.2

Q ss_pred             CCCCCCcchhhccchHHHHHHHHhhCCCCCCCCCHHHHHHHhhCCCCchH-----HHHHHHHHHHHHHHHhhcccceeee
Q 022152            9 STWVGKKPLRRIGGMSDALSIAADLGFSVAPPPSQEELQNLCANGEKGDD-----LIRVLRELTAVQRKIADLQVELQGR   83 (302)
Q Consensus         9 ~~w~~~~~~~~lG~~~~~Lsia~~Lgh~vas~~sqE~lq~~~~~~a~s~~-----l~s~LrQIT~lQ~eLdq~nLEIelL   83 (302)
                      |||+|++|++++|||.++++||+++||..       |+ +.+++.++||+     +|++|+|||++|++|||+|+|||++
T Consensus         2 npW~p~~~~~~~agl~l~~~vAsg~~~~~-------~l-~~s~~~~~~f~~~s~~l~s~L~QIt~iQaeI~q~nlEielL   73 (277)
T PF15003_consen    2 NPWDPASPAPRAAGLLLALCVASGLGTQE-------ML-DISQKEAPCFSEKSSDLFSRLRQITNIQAEIDQLNLEIELL   73 (277)
T ss_pred             CCCCCCCcCCchHHHHHHHHHHhccCccc-------cc-CcccccchhhhhhhhHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence            69999999999999999999999988765       45 55667777887     9999999999999999999999999


Q ss_pred             ccccccccccChhHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhccccCCCcchhhhhhHHHHHHHHHHHhHHHHHHHhH
Q 022152           84 KDDKNVAHLTHVSEMQKKIETLSRITTILKDVIQNKDRIIARLQQPYSLDCIPVEAEYQKQFSELLMKAASDYGALTASV  163 (302)
Q Consensus        84 KlDKeTADltH~~~L~kK~e~LQ~mnsHLeaVLkeK~~LrqRLqkP~~~enLPVEA~yHR~vVeLL~lavsfIe~Lee~L  163 (302)
                      ++||+||||+|++||++||++||+||+||++||+||++||+|||||||++||||||+|||||||||++||+||++|+++|
T Consensus        74 kleKeTADltH~~~L~~K~~~Lq~m~shLe~VLk~K~~Lr~RLqkP~~qe~LPVEA~yHr~vVeLL~laa~fi~~Le~~L  153 (277)
T PF15003_consen   74 KLEKETADLTHPDYLAEKCEALQSMNSHLEAVLKEKDRLRQRLQKPYCQENLPVEAQYHRYVVELLELAASFIEKLEEHL  153 (277)
T ss_pred             HhhcchHhhhCHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhhhcCccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhcccccCCCCcccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCCCCCCCCCCCCCCccCC
Q 022152          164 ADFQWSQSFKEPPSIWGEMLRPIPVALASCTRFFEAMSAMRESFATLQHLRVGDSASSLPITPDNNSSQRVPGGSDCVTP  243 (302)
Q Consensus       164 e~I~W~snF~~~~~~~~~~Lr~Ip~alasc~~~~ea~s~~r~~~a~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (302)
                      ++|+|+++|++++++|+++|++||+.+|+|++|||++.+||++++.+|.+|+|.++...|.+|        ++|+||+| 
T Consensus       154 etIrwip~~~~~~~~m~~aL~ki~~lvae~E~l~e~ilkwRe~~ke~~~~~~~~~~~~~~~~~--------~~d~~~~t-  224 (277)
T PF15003_consen  154 ETIRWIPNFDENPSNMDKALAKIDALVAECEELAEQILKWREQQKEVSSYIPKMLAEENPLHK--------PHDSDCIT-  224 (277)
T ss_pred             HHHhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCc--------CCCCCccC-
Confidence            999999999999999999999999999999999999999999999999999999999888888        59999999 


Q ss_pred             CCCCCCCCchhHHHHHHHHhhhhhhhhhhhhhhhccccCCCCCCCccccCCCccccC
Q 022152          244 PPWTNESSLDDLVIRNLRRQELGRQEAEDAISEVSDLSQSDGTNNRRLSWPLQVKKS  300 (302)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (302)
                      |||++|++||||+||++|||+++++++++++|++|     ||++|||||||||||++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~  276 (277)
T PF15003_consen  225 PPWRAESSFDDLAIRSRRRQNNDQQEEDDEESEDG-----DDNSQRRLSWPPSVKTS  276 (277)
T ss_pred             CccccCCchhHHHHhhhHHHHHHhhccccCcCCCC-----cccccccccCCCccCCC
Confidence            89999999999999999999999998888888887     49999999999999986



>PF15003 HAUS2: HAUS augmin-like complex subunit 2 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00