Citrus Sinensis ID: 022192


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-
MDALTIKPTSNSLRFGKTKPLPPTRLSFFKFTHFNKLRASSVIAFCVKGTPSNPQNRQPEYNNNNDTDNHNHKRNFPVNPFCVLFPILQSIKGLASSQTKKWASRLQAHSSQLENINVIDQNSNDYLQTGAFGAALLSVTSTAKVKISPFVATLAANPTFVSGLFAWMIAQSTKVFLNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEVLNMIVEDLFQGHPISQRKLKELLGHTPSQVFAGAMLGILVACFCCQSCSVAT
cccccccccccccccccccccccccEEEEEEccccccccccEEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHccccHHcccHHHHHHHcccHHHHcccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccc
cccccEcccHHHHcccccccccccEEEEEEEccccccccccEEEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHccHHHHHcccHHHHccHHHHcccHHHHHHHHHHHHHHcccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcc
mdaltikptsnslrfgktkplpptrlsffkfthfnklrASSVIAFCvkgtpsnpqnrqpeynnnndtdnhnhkrnfpvnpfcvLFPILQSIKGLASSQTKKWASRLQAHSsqleninvidqnsndylqtgAFGAALLSVTStakvkispfvatlaanptfVSGLFAWMIAQSTKVFLNFFVERKWDLRLLFasggmpsshsALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEVLNMIVEDlfqghpisqRKLKEllghtpsqvFAGAMLGILVACFccqscsvat
mdaltikptsnslrfgktkplppTRLSFFKFTHFNKLRASSVIAFCVKGTpsnpqnrqpeynNNNDTDNHNHKRNFPVNPFCVLFPILQSIKGLASSQTKKWASRLQAHSSQLENINVIDQNSNDYLQTGAFGAALLSVTSTAKVKISPFVATLAANPTFVSGLFAWMIAQSTKVFLNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEVLNMIVEDLFQGHPISQRKLKELLGHTPSQVFAGAMLGILVACFCCQSCSVAT
MDALTIKPTSNSLRFGKTKPLPPTRLSFFKFTHFNKLRASSVIAFCVKGTPSNPQNRQPEYnnnndtdnhnhKRNFPVNPFCVLFPILQSIKGLASSQTKKWASRLQAHSSQLENINVIDQNSNDYLQTGAFGAALLSVTSTAKVKISPFVATLAANPTFVSGLFAWMIAQSTKVFLNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEVLNMIVEDLFQGHPISQRKLKELLGHTPSQVFAGAMLGILVACFCCQSCSVAT
***********************TRLSFFKFTHFNKLRASSVIAFCVK**************************NFPVNPFCVLFPILQSIKGLASS***KWA*********LENINVIDQNSNDYLQTGAFGAALLSVTSTAKVKISPFVATLAANPTFVSGLFAWMIAQSTKVFLNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEVLNMIVEDLFQGHPISQRKLKELLGHTPSQVFAGAMLGILVACFCCQSCS***
********TSNSLRFGKTKPLPPTRLSFFKFTHFNKLRASSVIAF************************HNHKRNFPVNPFCVLFPILQSIKGLASSQTKKWASRLQAHSS*LEN*NVIDQNSNDYLQTGAFGAALLSVTSTAKVKISPFVATLAANPTFVSGLFAWMIAQSTKVFLNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEVLNMIVEDLFQ******RKLKELLGHTPSQVFAGAMLGILVACFCCQSCSVAT
MDALTIKPTSNSLRFGKTKPLPPTRLSFFKFTHFNKLRASSVIAFCVKGTPSNPQNRQPEYNNNNDTDNHNHKRNFPVNPFCVLFPILQSIK****************HSSQLENINVIDQNSNDYLQTGAFGAALLSVTSTAKVKISPFVATLAANPTFVSGLFAWMIAQSTKVFLNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEVLNMIVEDLFQGHPISQRKLKELLGHTPSQVFAGAMLGILVACFCCQSCSVAT
**ALTIKPTSNSLRFGKTKPLPPTRLSFFKFTHFNKLRASSVIAFCVKGTPSNPQNRQP***NNND***HNHKRNFPVNPFCVLFPILQSIKGLASSQTKKWASRLQAHSSQLENINVIDQNSNDYLQTGAFGAALLSVTSTAKVKISPFVATLAANPTFVSGLFAWMIAQSTKVFLNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEVLNMIVEDLFQGHPISQRKLKELLGHTPSQVFAGAMLGILVACFCCQSCSVAT
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDALTIKPTSNSLRFGKTKPLPPTRLSFFKFTHFNKLRASSVIAFCVKGTPSNPQNRQPEYNNNNDTDNHNHKRNFPVNPFCVLFPILQSIKGLASSQTKKWASRLQAHSSQLENINVIDQNSNDYLQTGAFGAALLSVTSTAKVKISPFVATLAANPTFVSGLFAWMIAQSTKVFLNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEVLNMIVEDLFQGHPISQRKLKELLGHTPSQVFAGAMLGILVACFCCQSCSVAT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query301 2.2.26 [Sep-21-2011]
O32107158 Uncharacterized membrane yes no 0.445 0.848 0.469 1e-21
>sp|O32107|YUID_BACSU Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) GN=yuiD PE=4 SV=1 Back     alignment and function desciption
 Score =  104 bits (259), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/149 (46%), Positives = 89/149 (59%), Gaps = 15/149 (10%)

Query: 154 LAANPTFVSGLFAWMIAQSTKVFLNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVAL 213
           L  N   +S L A + AQ  KV + F V RK D  L+ ++GGMPSSHSA  TAL+T VAL
Sbjct: 3   LLTNFPLLSSLAAIIFAQVIKVPIQFIVSRKLDWSLVTSTGGMPSSHSAAVTALSTGVAL 62

Query: 214 CHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEVLNMIVEDLFQGHPISQRK------ 267
            HG+  SLF V   F++I M+DA GVRRHAG QA V+N +V D      +++ K      
Sbjct: 63  EHGLDSSLFAVSAIFAVITMFDATGVRRHAGEQATVINKLVIDF--NRFVNEAKDFPKAA 120

Query: 268 -------LKELLGHTPSQVFAGAMLGILV 289
                  LKELLGH P +VF G + GIL+
Sbjct: 121 EKEKQKKLKELLGHQPIEVFFGGLTGILL 149





Bacillus subtilis (strain 168) (taxid: 224308)

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query301
255564703288 conserved hypothetical protein [Ricinus 0.936 0.979 0.688 1e-108
297817510285 hypothetical protein ARALYDRAFT_907735 [ 0.920 0.971 0.616 2e-97
18412127284 Acid phosphatase/vanadium-dependent halo 0.916 0.971 0.612 6e-96
225470904252 PREDICTED: uncharacterized membrane prot 0.724 0.865 0.654 5e-87
449432050284 PREDICTED: uncharacterized protein LOC10 0.747 0.792 0.687 1e-86
224064252175 predicted protein [Populus trichocarpa] 0.571 0.982 0.918 1e-86
449477929284 PREDICTED: LOW QUALITY PROTEIN: uncharac 0.747 0.792 0.683 4e-86
147805384185 hypothetical protein VITISV_024312 [Viti 0.594 0.967 0.826 3e-84
356573233214 PREDICTED: uncharacterized membrane prot 0.568 0.799 0.865 5e-82
6850868197 putative protein [Arabidopsis thaliana] 0.631 0.964 0.734 5e-79
>gi|255564703|ref|XP_002523346.1| conserved hypothetical protein [Ricinus communis] gi|223537434|gb|EEF39062.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 206/299 (68%), Positives = 226/299 (75%), Gaps = 17/299 (5%)

Query: 1   MDALTIKPTSNSLRFGKTKPLPP----TRLSFFKFTHFNKLRASSVIAFCVKGTPSNPQN 56
           MD+LT+KPT N   F  T  +        LSFFK T   K R +S I F  +  PSN QN
Sbjct: 1   MDSLTLKPTLNFFYFNPTTTIKSLYSHKHLSFFKLTPSTKFRTASPICFSGRN-PSNAQN 59

Query: 57  RQPEYNNNNDTDNHNHKRNFPVNPFCVLFPILQSIKGLASSQTKKWASRLQAHSSQLENI 116
             P     ND         F  NP  VL P+LQ +K +A SQTK+W SRLQA+S + E  
Sbjct: 60  --PRLTRKNDA--------FSFNPLWVLVPVLQRVKFIAFSQTKRWVSRLQAYSEESEK- 108

Query: 117 NVIDQNSNDYLQTGAFGAALLSVTSTAKVKISPFVATLAANPTFVSGLFAWMIAQSTKVF 176
             ++    +YLQ GAFG ALLS+TS AKVKISPFV+TLAANPTF+SGL AW +AQSTKV 
Sbjct: 109 -AMNDYDGNYLQNGAFGVALLSITSNAKVKISPFVSTLAANPTFISGLLAWFVAQSTKVI 167

Query: 177 LNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDA 236
           LNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDA
Sbjct: 168 LNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDA 227

Query: 237 IGVRRHAGMQAEVLNMIVEDLFQGHPISQRKLKELLGHTPSQVFAGAMLGILVACFCCQ 295
           IGVRRHAGMQAEVLNMIVEDLFQGHPISQRKLKELLGHTPSQV AGA+LGIL  C+CCQ
Sbjct: 228 IGVRRHAGMQAEVLNMIVEDLFQGHPISQRKLKELLGHTPSQVLAGAVLGILAGCYCCQ 286




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817510|ref|XP_002876638.1| hypothetical protein ARALYDRAFT_907735 [Arabidopsis lyrata subsp. lyrata] gi|297322476|gb|EFH52897.1| hypothetical protein ARALYDRAFT_907735 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18412127|ref|NP_567117.1| Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana] gi|19347771|gb|AAL86337.1| unknown protein [Arabidopsis thaliana] gi|21555852|gb|AAM63948.1| unknown [Arabidopsis thaliana] gi|21689857|gb|AAM67572.1| unknown protein [Arabidopsis thaliana] gi|332646734|gb|AEE80255.1| Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225470904|ref|XP_002263519.1| PREDICTED: uncharacterized membrane protein yuiD [Vitis vinifera] gi|297745470|emb|CBI40550.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449432050|ref|XP_004133813.1| PREDICTED: uncharacterized protein LOC101209825 [Cucumis sativus] Back     alignment and taxonomy information
>gi|224064252|ref|XP_002301410.1| predicted protein [Populus trichocarpa] gi|222843136|gb|EEE80683.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449477929|ref|XP_004155165.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101209825 [Cucumis sativus] Back     alignment and taxonomy information
>gi|147805384|emb|CAN71954.1| hypothetical protein VITISV_024312 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356573233|ref|XP_003554767.1| PREDICTED: uncharacterized membrane protein yuiD-like [Glycine max] Back     alignment and taxonomy information
>gi|6850868|emb|CAB71107.1| putative protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query301
TAIR|locus:2076790284 AT3G61770 "AT3G61770" [Arabido 0.897 0.950 0.609 2e-86
TAIR|locus:2008575163 AT1G67600 "AT1G67600" [Arabido 0.491 0.907 0.519 9.8e-32
TAIR|locus:2089950174 AT3G21610 "AT3G21610" [Arabido 0.438 0.758 0.492 3.9e-28
UNIPROTKB|Q81YD7141 BAS3352 "Uncharacterized prote 0.458 0.978 0.422 1.8e-25
TIGR_CMR|BA_3613141 BA_3613 "conserved hypothetica 0.458 0.978 0.422 1.8e-25
UNIPROTKB|Q71X40157 LMOf2365_2359 "Putative unchar 0.455 0.872 0.439 1.6e-24
TAIR|locus:505006336213 AT3G12685 "AT3G12685" [Arabido 0.342 0.483 0.355 2e-17
TAIR|locus:2076790 AT3G61770 "AT3G61770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
 Identities = 175/287 (60%), Positives = 212/287 (73%)

Query:    15 FGKTKPLPPTRLSFFKFTHFNKLRASS-VIAFCVKGTPSNPQNRQPEYXXXXXXXXXXXK 73
             F KT    P+R SF K T   KL AS+  ++     + SNP+   P+             
Sbjct:    13 FSKTISHYPSRFSFVKLTSIQKLEASNNTLSLFCCKSSSNPK---PDC-----------N 58

Query:    74 RNFPVNPFCVLFPILQSIKGLASSQTKKWASRLQAHSSQLENINVIDQNSNDYLQTGAFG 133
             R   +NP CVL PI+++IKGL SSQ+++W SR +A+       +  +  + D    G  G
Sbjct:    59 RRIKLNPLCVLRPIIRTIKGLVSSQSRQWMSRFRAYRDDTAAFS--EDFAGDLKHNGGLG 116

Query:   134 AALLSVTSTAKVKISPFVATLAANPTFVSGLFAWMIAQSTKVFLNFFVERKWDLRLLFAS 193
              ALLSVT++AK+KISPFVATL+ANPTFVS + AW  AQS+K+ +NFF+ERKWD RLL+AS
Sbjct:   117 IALLSVTASAKIKISPFVATLSANPTFVSAVVAWFFAQSSKMVINFFIERKWDFRLLYAS 176

Query:   194 GGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEVLNMI 253
             GGMPSSHSALC ALTTSVALCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEVLN+I
Sbjct:   177 GGMPSSHSALCMALTTSVALCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEVLNLI 236

Query:   254 VEDLFQGHPISQRKLKELLGHTPSQVFAGAMLGILVACFCCQSCSVA 300
             + DLF+GHPISQRKLKELLGHTPSQV AGA++GI++ACFCCQ   V+
Sbjct:   237 IRDLFEGHPISQRKLKELLGHTPSQVLAGALVGIVIACFCCQGYLVS 283




GO:0003674 "molecular_function" evidence=ND
GO:0005886 "plasma membrane" evidence=ISM
GO:0008150 "biological_process" evidence=ND
TAIR|locus:2008575 AT1G67600 "AT1G67600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089950 AT3G21610 "AT3G21610" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q81YD7 BAS3352 "Uncharacterized protein" [Bacillus anthracis (taxid:1392)] Back     alignment and assigned GO terms
TIGR_CMR|BA_3613 BA_3613 "conserved hypothetical protein" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|Q71X40 LMOf2365_2359 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)] Back     alignment and assigned GO terms
TAIR|locus:505006336 AT3G12685 "AT3G12685" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query301
pfam02681141 pfam02681, DUF212, Divergent PAP2 family 2e-74
COG1963153 COG1963, COG1963, Uncharacterized protein conserve 2e-52
cd03383109 cd03383, PAP2_diacylglycerolkinase, PAP2_like prot 0.002
smart00014116 smart00014, acidPPc, Acid phosphatase homologues 0.004
>gnl|CDD|145700 pfam02681, DUF212, Divergent PAP2 family Back     alignment and domain information
 Score =  224 bits (573), Expect = 2e-74
 Identities = 79/141 (56%), Positives = 98/141 (69%), Gaps = 4/141 (2%)

Query: 154 LAANPTFVSGLFAWMIAQSTKVFLNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVAL 213
           L +N   ++ L AW +AQ  KV +  F ER+WD R+LF +GGMPSSHSAL TAL T V L
Sbjct: 1   LLSNKVLLAALLAWFLAQFIKVIIELFKERRWDFRVLFETGGMPSSHSALVTALATGVGL 60

Query: 214 CHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAEVLNMIVEDLFQGHPI----SQRKLK 269
             G   SLF +   F+LIVMYDA GVRR AG QAEVLN ++E+LF+        SQ+ LK
Sbjct: 61  QEGFDSSLFAIAAVFALIVMYDAAGVRRAAGKQAEVLNQLIEELFEEVEEHELLSQKPLK 120

Query: 270 ELLGHTPSQVFAGAMLGILVA 290
           ELLGHTP +VF GA+LGI++A
Sbjct: 121 ELLGHTPLEVFVGALLGIVIA 141


This family is related to the pfam01569 family (personal obs: C Yeats). Length = 141

>gnl|CDD|224874 COG1963, COG1963, Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>gnl|CDD|239478 cd03383, PAP2_diacylglycerolkinase, PAP2_like proteins, diacylglycerol_kinase like sub-family Back     alignment and domain information
>gnl|CDD|214471 smart00014, acidPPc, Acid phosphatase homologues Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 301
PF02681141 DUF212: Divergent PAP2 family; InterPro: IPR003832 100.0
COG1963153 Uncharacterized protein conserved in bacteria [Fun 100.0
cd03383109 PAP2_diacylglycerolkinase PAP2_like proteins, diac 99.64
cd03395177 PAP2_like_4 PAP2_like_4 proteins. PAP2 is a super- 99.54
cd03394106 PAP2_like_5 PAP2_like_5 proteins. PAP2 is a super- 99.53
cd03388151 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-pho 99.46
cd03391159 PAP2_containing_2_like PAP2, subfamily similar to 99.45
cd03385144 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfa 99.44
cd03382159 PAP2_dolichyldiphosphatase PAP2_like proteins, dol 99.42
cd03392182 PAP2_like_2 PAP2_like_2 proteins. PAP2 is a super- 99.42
PRK09597190 lipid A 1-phosphatase; Reviewed 99.42
cd03389186 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lip 99.41
cd03390193 PAP2_containing_1_like PAP2, subfamily similar to 99.41
cd03393125 PAP2_like_3 PAP2_like_3 proteins. PAP2 is a super- 99.4
PRK10699244 phosphatidylglycerophosphatase B; Provisional 99.36
cd03384150 PAP2_wunen PAP2, wunen subfamily. Most likely a fa 99.33
cd03396197 PAP2_like_6 PAP2_like_6 proteins. PAP2 is a super- 99.29
PRK11837202 undecaprenyl pyrophosphate phosphatase; Provisiona 99.26
PLN02525 352 phosphatidic acid phosphatase family protein 99.25
PF01569129 PAP2: PAP2 superfamily This family includes the fo 99.21
PLN02250314 lipid phosphate phosphatase 99.21
smart00014116 acidPPc Acid phosphatase homologues. 99.17
PLN02715327 lipid phosphate phosphatase 99.16
cd01610122 PAP2_like PAP2_like proteins, a super-family of hi 99.16
PLN02731333 Putative lipid phosphate phosphatase 99.16
COG0671232 PgpB Membrane-associated phospholipid phosphatase 99.14
cd03381235 PAP2_glucose_6_phosphatase PAP2_like proteins, glu 99.14
KOG3146228 consensus Dolichyl pyrophosphate phosphatase and r 98.99
cd03380209 PAP2_like_1 PAP2_like_1 proteins, a sub-family of 98.93
cd03397232 PAP2_acid_phosphatase PAP2, bacterial acid phospha 98.78
cd03398232 PAP2_haloperoxidase PAP2, haloperoxidase_like subf 98.71
KOG2822 407 consensus Sphingoid base-phosphate phosphatase [Li 98.51
KOG3030317 consensus Lipid phosphate phosphatase and related 98.48
cd03386186 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfa 98.43
KOG4268189 consensus Uncharacterized conserved protein contai 98.36
PF14378191 PAP2_3: PAP2 superfamily 96.94
PF1436074 PAP2_C: PAP2 superfamily C-terminal 89.72
COG4129 332 Predicted membrane protein [Function unknown] 84.96
>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised Back     alignment and domain information
Probab=100.00  E-value=3.5e-55  Score=374.58  Aligned_cols=137  Identities=58%  Similarity=0.966  Sum_probs=131.5

Q ss_pred             HhhhhHHHHHHHHHHHHHHhhhhhhhhccCccchhhhhccCCcCChhHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHh
Q 022192          154 LAANPTFVSGLFAWMIAQSTKVFLNFFVERKWDLRLLFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVM  233 (301)
Q Consensus       154 L~~N~~LlaAliA~~iAQllK~lI~~lr~rk~d~~~~~~sGGMPSSHSA~V~ALATaIgL~~G~~S~iFalA~vfA~IVm  233 (301)
                      |+.|++|++++++|++||++|++++++++|+|||++++++|||||||||+|+||||++|+.+|++|++|++++++|+|||
T Consensus         1 l~~N~~l~~a~~a~~~AQ~iK~~~~~~~~r~~d~~~~~~sGGMPSSHSA~V~aLat~ig~~~G~~S~~FAia~v~a~IVm   80 (141)
T PF02681_consen    1 LLSNKVLIAALIAWFIAQFIKVFINYLKERKWDWRRFFSSGGMPSSHSATVSALATAIGLQEGFDSPLFAIAAVFALIVM   80 (141)
T ss_pred             CcCChHHHHHHHHHHHHHHHHHHHHHHHhCcccHHHHhhcCCCCchHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHhhe
Confidence            47899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcccchhhhhhhhHHHHHHHHHhhhcCC----CCcccchhhhCCCChhHHHHHHHHHHHHH
Q 022192          234 YDAIGVRRHAGMQAEVLNMIVEDLFQGH----PISQRKLKELLGHTPSQVFAGAMLGILVA  290 (301)
Q Consensus       234 YDA~GVRR~aGkQA~vLN~L~~~~~~~~----~~~~~~LKE~LGHTP~EVlaGALLGIlVA  290 (301)
                      |||+||||++||||++||+|++++.+++    +..+++|||++||||.||++|+++|+++|
T Consensus        81 yDA~GVRr~aG~qA~~lN~l~~~~~~~~~~~~~~~~~~LKE~lGHtp~EV~~G~llGi~vA  141 (141)
T PF02681_consen   81 YDAMGVRRAAGKQAKVLNQLIEELEEEHQSEPPIQEKKLKELLGHTPLEVFAGALLGIVVA  141 (141)
T ss_pred             eehHHHHHHHHHHHHHHHHHHHHHHhhhccccchhhhcccccCCCCHHHHHHHHHHHHhhC
Confidence            9999999999999999999999998665    35668999999999999999999999985



>COG1963 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd03383 PAP2_diacylglycerolkinase PAP2_like proteins, diacylglycerol_kinase like sub-family Back     alignment and domain information
>cd03395 PAP2_like_4 PAP2_like_4 proteins Back     alignment and domain information
>cd03394 PAP2_like_5 PAP2_like_5 proteins Back     alignment and domain information
>cd03388 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-phosphatase subfamily Back     alignment and domain information
>cd03391 PAP2_containing_2_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2 Back     alignment and domain information
>cd03385 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfamily Back     alignment and domain information
>cd03382 PAP2_dolichyldiphosphatase PAP2_like proteins, dolichyldiphosphatase subfamily Back     alignment and domain information
>cd03392 PAP2_like_2 PAP2_like_2 proteins Back     alignment and domain information
>PRK09597 lipid A 1-phosphatase; Reviewed Back     alignment and domain information
>cd03389 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lipid A 1-phosphatase subfamily Back     alignment and domain information
>cd03390 PAP2_containing_1_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1 Back     alignment and domain information
>cd03393 PAP2_like_3 PAP2_like_3 proteins Back     alignment and domain information
>PRK10699 phosphatidylglycerophosphatase B; Provisional Back     alignment and domain information
>cd03384 PAP2_wunen PAP2, wunen subfamily Back     alignment and domain information
>cd03396 PAP2_like_6 PAP2_like_6 proteins Back     alignment and domain information
>PRK11837 undecaprenyl pyrophosphate phosphatase; Provisional Back     alignment and domain information
>PLN02525 phosphatidic acid phosphatase family protein Back     alignment and domain information
>PF01569 PAP2: PAP2 superfamily This family includes the following Prosite family; InterPro: IPR000326 This entry represents type 2 phosphatidic acid phosphatase (PAP2; 3 Back     alignment and domain information
>PLN02250 lipid phosphate phosphatase Back     alignment and domain information
>smart00014 acidPPc Acid phosphatase homologues Back     alignment and domain information
>PLN02715 lipid phosphate phosphatase Back     alignment and domain information
>cd01610 PAP2_like PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies Back     alignment and domain information
>PLN02731 Putative lipid phosphate phosphatase Back     alignment and domain information
>COG0671 PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism] Back     alignment and domain information
>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily Back     alignment and domain information
>KOG3146 consensus Dolichyl pyrophosphate phosphatase and related acid phosphatases [Lipid transport and metabolism] Back     alignment and domain information
>cd03380 PAP2_like_1 PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases Back     alignment and domain information
>cd03397 PAP2_acid_phosphatase PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases Back     alignment and domain information
>cd03398 PAP2_haloperoxidase PAP2, haloperoxidase_like subfamily Back     alignment and domain information
>KOG2822 consensus Sphingoid base-phosphate phosphatase [Lipid transport and metabolism] Back     alignment and domain information
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism] Back     alignment and domain information
>cd03386 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfamily Back     alignment and domain information
>KOG4268 consensus Uncharacterized conserved protein containing PAP2 domain [Function unknown] Back     alignment and domain information
>PF14378 PAP2_3: PAP2 superfamily Back     alignment and domain information
>PF14360 PAP2_C: PAP2 superfamily C-terminal Back     alignment and domain information
>COG4129 Predicted membrane protein [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query301
2ipb_A230 PHON protein, class A nonspecific acid phosphatase 99.16
1d2t_A231 Acid phosphatase; all alpha, hydrolase; 1.90A {Esc 99.13
1qi9_A556 Protein (vanadium bromoperoxidase); haloperoxidase 98.69
1up8_A598 Vanadium-dependent bromoperoxidase 1; haloperoxida 97.97
3bb0_A 609 Vanadium chloroperoxidase; protein phosphate-inter 97.62
>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A Back     alignment and structure
Probab=99.16  E-value=5.7e-11  Score=104.57  Aligned_cols=91  Identities=20%  Similarity=0.073  Sum_probs=68.8

Q ss_pred             HHHHHhhhhhhhhccCccc----hhh-----hhccCCcCChhHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhcccc
Q 022192          168 MIAQSTKVFLNFFVERKWD----LRL-----LFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDAIG  238 (301)
Q Consensus       168 ~iAQllK~lI~~lr~rk~d----~~~-----~~~sGGMPSSHSA~V~ALATaIgL~~G~~S~iFalA~vfA~IVmYDA~G  238 (301)
                      ++.+++|..++|-|+...+    +..     .-...+|||+|+++.+++++.+.+..+..   ....++++.+|+++   
T Consensus        97 ~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~~---~~~~~~~a~~v~~S---  170 (230)
T 2ipb_A           97 YATASAKKYYMRTRPFVLFNHSTCRPEDENTLRKDGSYPSGHDAYSTLLALVLSQARPER---AQELARRGWEFGQS---  170 (230)
T ss_dssp             TTTHHHHHHHCCCCHHHHTTCCCSCGGGHHHHHTSCCSSCHHHHHHHHHHHHHHHHCGGG---HHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHhCCCCcCccCCCCeeccCcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH---
Confidence            6789999999988763211    111     12345999999999999999888775432   22345677888775   


Q ss_pred             hhhhhhhhHHHHHHHHHhhhcCCCCcccchhhhCC-CChhHHHHHHHHHHHHHHHHH
Q 022192          239 VRRHAGMQAEVLNMIVEDLFQGHPISQRKLKELLG-HTPSQVFAGAMLGILVACFCC  294 (301)
Q Consensus       239 VRR~aGkQA~vLN~L~~~~~~~~~~~~~~LKE~LG-HTP~EVlaGALLGIlVAli~~  294 (301)
                                                    |.++| |+|.||++|+++|++++..++
T Consensus       171 ------------------------------Rv~~G~H~~sDVlaG~~lG~~~~~~~~  197 (230)
T 2ipb_A          171 ------------------------------RVICGAHWQSDVDAGRYVGAVEFARLQ  197 (230)
T ss_dssp             ------------------------------HHHHTSSCHHHHHHHHHHHHHHHHHHT
T ss_pred             ------------------------------HHhcCcccHHHHHHHHHHHHHHHHHHH
Confidence                                          88999 999999999999999987664



>1d2t_A Acid phosphatase; all alpha, hydrolase; 1.90A {Escherichia blattae} SCOP: a.111.1.1 PDB: 1eoi_A 1iw8_A Back     alignment and structure
>1qi9_A Protein (vanadium bromoperoxidase); haloperoxidase, oxidoreductase; 2.05A {Ascophyllum nodosum} SCOP: a.111.1.2 Back     alignment and structure
>1up8_A Vanadium-dependent bromoperoxidase 1; haloperoxidase, vanadate; 2.20A {Corallina pilulifera} SCOP: a.111.1.2 PDB: 1qhb_A Back     alignment and structure
>3bb0_A Vanadium chloroperoxidase; protein phosphate-intermediate complex, phospatase activity, chloride, metal-binding, oxidoreductase, secreted; 1.50A {Curvularia inaequalis} PDB: 1vns_A 1vnc_A 1vni_A 1idq_A 1vne_A 1vnf_A 1idu_A 1vng_A 1vnh_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query301
d1d2ta_224 Bacterial acid phosphatase {Escherichia blattae [T 98.69
>d1d2ta_ a.111.1.1 (A:) Bacterial acid phosphatase {Escherichia blattae [TaxId: 563]} Back     information, alignment and structure
class: All alpha proteins
fold: Acid phosphatase/Vanadium-dependent haloperoxidase
superfamily: Acid phosphatase/Vanadium-dependent haloperoxidase
family: Type 2 phosphatidic acid phosphatase, PAP2
domain: Bacterial acid phosphatase
species: Escherichia blattae [TaxId: 563]
Probab=98.69  E-value=1.7e-08  Score=88.17  Aligned_cols=87  Identities=20%  Similarity=0.108  Sum_probs=60.6

Q ss_pred             HHhhhhhhhhccCc------cchh---hhhccCCcCChhHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhcccchhh
Q 022192          171 QSTKVFLNFFVERK------WDLR---LLFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDAIGVRR  241 (301)
Q Consensus       171 QllK~lI~~lr~rk------~d~~---~~~~sGGMPSSHSA~V~ALATaIgL~~G~~S~iFalA~vfA~IVmYDA~GVRR  241 (301)
                      ...|..++|-|+-.      ..+.   ..-.+++|||+|++..+++|+.++.......   ...+.+|..|.++      
T Consensus       106 ~~~K~~~~R~RP~~~~~~~~~~~~~~~~~~~~~SfPSGHa~~a~~~a~~la~~~p~~~---~~~~~~a~~~~~S------  176 (224)
T d1d2ta_         106 RSAKDHYMRIRPFAFYGVSTCNTTEQDKLSKNGSYPSGHTSIGWATALVLAEINPQRQ---NEILKRGYELGQS------  176 (224)
T ss_dssp             HHHHHHHCCCCHHHHHTCCCSCC--CCCCCSSCCSSCHHHHHHHHHHHHHHHHCGGGH---HHHHHHHHHHHHH------
T ss_pred             HHHHHHHcCCChhhhcCcCCCCccccccCCCCCCcCchhHHHHHHHHHHHHHHhHHHH---HHHHHHHHHhhhH------
Confidence            45688888776521      1111   1223679999999999999998887765422   2234566666553      


Q ss_pred             hhhhhHHHHHHHHHhhhcCCCCcccchhhhCC-CChhHHHHHHHHHHHHHHHH
Q 022192          242 HAGMQAEVLNMIVEDLFQGHPISQRKLKELLG-HTPSQVFAGAMLGILVACFC  293 (301)
Q Consensus       242 ~aGkQA~vLN~L~~~~~~~~~~~~~~LKE~LG-HTP~EVlaGALLGIlVAli~  293 (301)
                                                 |.+.| |+|+||++|.++|..++..+
T Consensus       177 ---------------------------Rv~~g~H~~sDv~aG~~lG~ai~a~l  202 (224)
T d1d2ta_         177 ---------------------------RVICGYHWQSDVDAARVVGSAVVATL  202 (224)
T ss_dssp             ---------------------------HHHHTSSCHHHHHHHHHHHHHHHHHH
T ss_pred             ---------------------------HHHcccccHHHHHHHHHHHHHHHHHH
Confidence                                       88999 99999999999998765433