Citrus Sinensis ID: 022196

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-
Protein Sequence
MASLQASLPSISAIWSSFPDSSSINSASIVTLTSSPANDRRIRRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPIRDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIPEVLTRLDPPSSPIEEPITEYES
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEEccccccHHHHHHHHccccccccccccEEEEEEcccccEEEEEEEEcccEEEEEEEEEEEEEcccEEEEEEEEEEEEcccccccccHHHHHHHHHHHHHHHHcccccHHHHcccccccccccccccEEEEEEEcccEEEEEcccccEEEEEEccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHccccccccEEcccccccccccccccEEEEccccccccccEEEEEEHEHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHEcccccHHHHHHHHHHHHHHHHcccccccccccHHccEEEEEEEccccHHHHHHHHHHHHccccHEEccccEEEEEccccEEEEEEEEEccccEEEEEEEEEEEcccccHEEEEEEEEEccccccHccccHHHHHHHHHHHHHHHccccHHHHHHHccccccccccHHHHEEHEEccHHEEEEEccccccEEEEEccccccccccccccccc
Coil and Loop (DISEMBL)
maslqaslpsisaiwssfpdsssinsasivtltsspandrRIRRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVagkttnmqqidvneritglerlnptprpttspflegrwnfewfgsgspgfFVARFIferfpptlanlsnmdVVIKDGKANITANFKLLNSIESKFSFSTKllvegplrlKEEYIEGIlesptvieeTIPEQLKGAFNQAVTTVqqlpapirdaisgglriplsgtfQRLFMISYLDEEILIIrdasgipevltrldppsspieepiteyes
Flexible Loop (DISEMBL)
maslqaslPSISAIWSSFPDSSSINSASivtltsspandrRIRRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVagkttnmqqidvneritglerlnptprpttspFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPIRDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASgipevltrldppsspieepiteyes
Low Complexity Region (SEG)
MASLQASLPSISAIWSSFPDSSSINSASIVTLTSSPANDRRIRRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPIRDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIPEVLTRLDppsspieepiTEYES
Disordered region (IsUnstruct)
*********************************************LRCKAMVQQAVQ*****Y*********KESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGL************PFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPIRDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIPEVL*******************
Disordered Region (DISOPRED)
***************************************************************************LLLAFKDAGGFEA***********IDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPIRDAISGGL****SGTFQRLFMISYLDEEILIIRDASGIPEVLTRL****************
Disordered Region (DISEMBL)
********PSISAIWSSFPDSSSINSASIVTLTSSPANDRRIRRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPIRDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIPEVLTRLDPPSSP**********
Disordered Region (DISPRO)
******************PDSSSINSASIVTLTSSPANDRRIRRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPIRDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIPEVLTRLDP**************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASLQASLPSISAIWSSFPDSSSINSASIVTLTSSPANDRRIRRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPIRDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIPEVLTRLDPPSSPIEEPITEYES
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	301	2.2.26 [Sep-21-2011]
Q8S9M1	299	Probable plastid-lipid-as	yes	no	0.993	1.0	0.667	1e-111
Q9M2P7	308	Probable plastid-lipid-as	no	no	0.807	0.788	0.695	1e-103
O82291	376	Probable plastid-lipid-as	no	no	0.548	0.438	0.285	7e-05
Q6K439	319	Probable plastid-lipid-as	no	no	0.564	0.532	0.258	0.0005

>sp|Q8S9M1|PAP13_ARATH Probable plastid-lipid-associated protein 13, chloroplastic OS=Arabidopsis thaliana GN=PAP13 PE=1 SV=2

 Score =  402 bits (1034), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 201/301 (66%), Positives = 233/301 (77%), Gaps = 2/301 (0%)

Query: 1   MASLQASLPSISAIWSSFPDSSSINSASIVTLTSSPANDRRIRRRLRCKAMVQQAVQGAP 60
           MA +  S+P  SA+   F  S+S +   +             RRR+  +AMVQ+ VQG+P
Sbjct: 1   MALIHGSVPGTSAVRLVFSTSASPSRFCLNVPVVKQGWKNSCRRRV-LRAMVQETVQGSP 59

Query: 61  AAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTT 120
             YA+EMERLSAKESLLLA KDAGGFEALV GKTTNMQ+IDVNERIT LERLNPTPRPTT
Sbjct: 60  LVYAREMERLSAKESLLLALKDAGGFEALVTGKTTNMQRIDVNERITSLERLNPTPRPTT 119

Query: 121 SPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNS 180
           SP  EGRWNFEWFGSGSPG   AR IFERFP TLANLS M+++IKD  A  TAN KLLNS
Sbjct: 120 SPCFEGRWNFEWFGSGSPGLLAARVIFERFPSTLANLSRMEILIKDANAKATANIKLLNS 179

Query: 181 IESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPI 240
           IESK   S+KL VEGPLRLKEEY+EG+LE+PTVIEE +PEQLK A  QA TT+QQLPA I
Sbjct: 180 IESKIILSSKLTVEGPLRLKEEYVEGMLETPTVIEEAVPEQLKSALGQAATTLQQLPALI 239

Query: 241 RDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIPEVLTRLDPPSSPIEEPITEYE 300
           +D ++ GLRIPLSG+F+R FMISYLDEEILI+RD  G+PEVLTR++ PSS + E I EY+
Sbjct: 240 KDTLASGLRIPLSGSFERFFMISYLDEEILIVRDTEGVPEVLTRIETPSSTVVETI-EYD 298

Query: 301 S 301
           S
Sbjct: 299 S 299

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M2P7|PAP9_ARATH Probable plastid-lipid-associated protein 9, chloroplastic OS=Arabidopsis thaliana GN=PAP9 PE=1 SV=1

 Score =  374 bits (960), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 169/243 (69%), Positives = 205/243 (84%)

Query: 44  RRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVN 103
           RR+ C+AMVQ +VQG P+ YA+EMERLSAKESL+LAF DAGGFEALV GK T+MQ+IDVN
Sbjct: 48  RRMICRAMVQDSVQGIPSVYAREMERLSAKESLILAFNDAGGFEALVTGKITDMQKIDVN 107

Query: 104 ERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVV 163
           ERIT LERLNPTPRPTTSP+LEGRW+FEWFG  +PG    R +FERFP TL +LSNM++ 
Sbjct: 108 ERITNLERLNPTPRPTTSPYLEGRWSFEWFGVNTPGSLAVRVMFERFPSTLVSLSNMEIF 167

Query: 164 IKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLK 223
           IKD     TAN KLLNSIE+K + S+KL +EGPLR+KEEY+EG+LESPTVIEE +P+QL+
Sbjct: 168 IKDNNTKATANIKLLNSIENKITLSSKLTIEGPLRMKEEYLEGLLESPTVIEEAVPDQLR 227

Query: 224 GAFNQAVTTVQQLPAPIRDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIPEVLT 283
           G   QA TT+QQLP PI+D ++ GLRIPL GT+QR FMISYLD+EILI+RD +G+PEVLT
Sbjct: 228 GLLGQATTTLQQLPEPIKDTLANGLRIPLGGTYQRFFMISYLDDEILIVRDTAGVPEVLT 287

Query: 284 RLD 286
           R++
Sbjct: 288 RVE 290

Arabidopsis thaliana (taxid: 3702)

>sp|O82291|PAP3_ARATH Probable plastid-lipid-associated protein 3, chloroplastic OS=Arabidopsis thaliana GN=PAP3 PE=1 SV=1

 Score = 48.1 bits (113), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 35/200 (17%)

Query: 101 DVNERITGLERLNPTPRPTTSP-FLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSN 159
           +V E +  LE LNPTP P  +P  L+G W            + A   F    P LA  S 
Sbjct: 177 EVLELVNQLEALNPTPAPLENPELLDGNWVL---------LYTA---FSELIPLLAAGST 224

Query: 160 MDVVIK------DGKANITANFKLLNSIESKFSFS--TKLLVEGPLRLKEEYIEGILESP 211
             + +K      D    I  N   L+S  + FSFS      V  P R++  + EG L+ P
Sbjct: 225 PLLKVKSISQSIDTNNLIIDNSTTLSSPFADFSFSATASFEVRSPSRIEVSFKEGTLKPP 284

Query: 212 TVIEET-IPEQLKGAFNQAVTT---------VQQLPAPIRDAISGG--LRIPLSGTFQRL 259
            +     +PE + G F Q ++          +Q + A I  A+SG   L++P  G     
Sbjct: 285 VIKSSVDLPESV-GVFGQQISLSLLKQSLNPLQDVAANISRALSGQPPLKLPFPGNRGSS 343

Query: 260 FMI-SYLDEEILIIRDASGI 278
           +++ +YLD+++ I R   G+
Sbjct: 344 WLLTTYLDKDLRISRGDGGL 363

Arabidopsis thaliana (taxid: 3702)

>sp|Q6K439|PAP2_ORYSJ Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PAP2 PE=2 SV=1

 Score = 45.4 bits (106), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 43/213 (20%)

Query: 93  KTTNMQQIDVNERITGLERLNPTPRPTTS-PFLEGRWNFEWFGSGSPGFFVARFIFERFP 151
           + ++  + +V E IT LE  NPTP PT +   L G+W             +A   F +  
Sbjct: 111 RASSETRAEVVELITQLEARNPTPAPTEALTLLNGKW------------ILAYTSFSQLF 158

Query: 152 PTL--ANLSNMDVVIKDGKANITANFKLLNSIE-------SKFSFSTKLLVEGPLRLKEE 202
           P L   +L  +  V +  +   + NF + N I+       +  S + K  V  P R++ +
Sbjct: 159 PLLGSGSLPQLVKVEEISQTIDSENFTVQNCIKFSGPLATTSVSTNAKFEVRSPKRVQIK 218

Query: 203 YIEGILESPTVIEETI-PEQ------------LKGAFNQAVTTVQQLPAPIRDAISGG-- 247
           + EGI+ +P + +  + PE+            LKG F    ++++   + +   ISG   
Sbjct: 219 FDEGIIGTPQLTDSIVLPEKFELFGQNIDLTPLKGIF----SSIENAASSVARTISGQPP 274

Query: 248 LRIPL-SGTFQRLFMISYLDEEILIIR-DASGI 278
           L+IP+ +   +   + +YLD+E+ I R D S I
Sbjct: 275 LKIPIRTDNAESWLLTTYLDDELRISRGDGSSI 307

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	301
118488681	311	unknown [Populus trichocarpa]	0.970	0.938	0.729	1e-121
255579735	297	conserved hypothetical protein [Ricinus	0.980	0.993	0.712	1e-118
224137846	257	predicted protein [Populus trichocarpa]	0.850	0.996	0.785	1e-115
224088198	251	predicted protein [Populus trichocarpa]	0.833	1.0	0.792	1e-115
363807353	310	uncharacterized protein LOC100779837 [Gl	0.857	0.832	0.775	1e-113
373431037	314	plastid lipid-associated protein [Vitis	0.996	0.955	0.657	1e-112
356500445	299	PREDICTED: probable plastid-lipid-associ	0.870	0.876	0.763	1e-112
225441447	314	PREDICTED: probable plastid-lipid-associ	0.996	0.955	0.653	1e-112
255644645	299	unknown [Glycine max]	0.870	0.876	0.759	1e-111
449437579	303	PREDICTED: probable plastid-lipid-associ	0.833	0.828	0.785	1e-111

>gi|118488681|gb|ABK96151.1| unknown [Populus trichocarpa]

 Score =  439 bits (1129), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/303 (72%), Positives = 249/303 (82%), Gaps = 11/303 (3%)

Query: 6   ASLPSISAIWSSFPDSSSINSASIVTLTSSPANDRR------IRRRLRCKAMVQQAVQG- 58
            SLP ISA+ S      S +  S  +LT  P N RR      IRRR+ C AMVQQAVQG 
Sbjct: 13  CSLPPISALRSRL----SPSLCSFQSLTKLPENCRRSSDYRGIRRRMTCTAMVQQAVQGG 68

Query: 59  APAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRP 118
           +PA YAKEMERL+AKESLLLAFKD+GGFEALV GKTT+MQ+IDVNERITGLERLNPTPRP
Sbjct: 69  SPATYAKEMERLAAKESLLLAFKDSGGFEALVTGKTTDMQRIDVNERITGLERLNPTPRP 128

Query: 119 TTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLL 178
           TTSPFLEGRWNFEWFG+GSPG   ARFIFERFP  LANLS MDVVIKDG A +TA+ KLL
Sbjct: 129 TTSPFLEGRWNFEWFGAGSPGLSAARFIFERFPSNLANLSKMDVVIKDGNAKVTAHMKLL 188

Query: 179 NSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPA 238
            SIESKF  S+KL VEGPLR+KEEY+EGILE+PTVIEET+PEQLKGAF QA++TVQQ+P 
Sbjct: 189 YSIESKFILSSKLTVEGPLRMKEEYVEGILETPTVIEETVPEQLKGAFGQALSTVQQIPV 248

Query: 239 PIRDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIPEVLTRLDPPSSPIEEPITE 298
             RDA S GL+IPLS TFQRLFMISYLD+EILI+RD+ G+PEV+TRLD P+S + EPI E
Sbjct: 249 SFRDAFSSGLKIPLSSTFQRLFMISYLDDEILILRDSIGVPEVVTRLDAPASLMAEPIAE 308

Query: 299 YES 301
           YES
Sbjct: 309 YES 311

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579735|ref|XP_002530706.1| conserved hypothetical protein [Ricinus communis] gi|223529720|gb|EEF31660.1| conserved hypothetical protein [Ricinus communis]

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 216/303 (71%), Positives = 249/303 (82%), Gaps = 8/303 (2%)

Query: 1   MASLQASLPSISAIWSSFPDSSSINSASIVTLTSSPANDRRIRRRLRCKAMVQQA--VQG 58
           MAS+Q SL +I+  W S P  +S N+ +  +L S P   R   R++ CKAMVQ+A  VQG
Sbjct: 1   MASVQTSLSAIT--WRSSPSFTSANATT--SLVSFPRFTRE-NRKMTCKAMVQEAAAVQG 55

Query: 59  APAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRP 118
           APA YAK MERLSAKESLLLAFKD+GGFEALV GK T MQ+IDVNERI GLERLNPTPRP
Sbjct: 56  APATYAKAMERLSAKESLLLAFKDSGGFEALVTGKVTEMQRIDVNERIIGLERLNPTPRP 115

Query: 119 TTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLL 178
           TTSPFLEGRWNFEWFGSGSPG   ARF+FERFP +LANLS MDVVIKDG A +TA  KLL
Sbjct: 116 TTSPFLEGRWNFEWFGSGSPGLLAARFLFERFPSSLANLSKMDVVIKDGNAKVTAIMKLL 175

Query: 179 NSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPA 238
           +SIESKF  S KL VEGPLR+KEEY+EG+LE+PT+IEE++PEQLKG   QAV+TVQQLP 
Sbjct: 176 SSIESKFVLSAKLSVEGPLRMKEEYVEGMLETPTIIEESVPEQLKGVLGQAVSTVQQLPV 235

Query: 239 PIRDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIPEVLTRLDPPSSPIEEPITE 298
           PIRDA+S GL++PLSG+FQR+FMISYLDEEILIIRD +GIPEVLTRL+ P+SP+     E
Sbjct: 236 PIRDAVSSGLKVPLSGSFQRIFMISYLDEEILIIRDTAGIPEVLTRLEAPTSPLVAN-GE 294

Query: 299 YES 301
           YES
Sbjct: 295 YES 297

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137846|ref|XP_002322666.1| predicted protein [Populus trichocarpa] gi|222867296|gb|EEF04427.1| predicted protein [Populus trichocarpa]

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 202/257 (78%), Positives = 227/257 (88%), Gaps = 1/257 (0%)

Query: 46  LRCKAMVQQAVQG-APAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNE 104
           + C AMVQQAVQG +PA YAKEMERL+AKESLLLAFKD+GGFEALV GKTT+MQ+IDVNE
Sbjct: 1   MTCTAMVQQAVQGGSPATYAKEMERLAAKESLLLAFKDSGGFEALVTGKTTDMQRIDVNE 60

Query: 105 RITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVI 164
           RITGLERLNPTPRPTTSPFLEGRWNFEWFG+GSPG   ARFIFERFP  LANLS MDVVI
Sbjct: 61  RITGLERLNPTPRPTTSPFLEGRWNFEWFGAGSPGLSAARFIFERFPSNLANLSKMDVVI 120

Query: 165 KDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKG 224
           KDG A +TA+ KLL SIESKF  S+KL VEGPLR+KEEY+EGILE+PTVIEET+PEQLKG
Sbjct: 121 KDGNAKVTAHMKLLYSIESKFILSSKLTVEGPLRMKEEYVEGILETPTVIEETVPEQLKG 180

Query: 225 AFNQAVTTVQQLPAPIRDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIPEVLTR 284
           AF QA++TVQQ+P   RDA S GL+IPLS TFQRLFMISYLD+EILI+RD+ G+PEV+TR
Sbjct: 181 AFGQALSTVQQIPVSFRDAFSSGLKIPLSSTFQRLFMISYLDDEILILRDSIGVPEVVTR 240

Query: 285 LDPPSSPIEEPITEYES 301
           LD P+S + EPI EYES
Sbjct: 241 LDAPASLMAEPIAEYES 257

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088198|ref|XP_002308366.1| predicted protein [Populus trichocarpa] gi|222854342|gb|EEE91889.1| predicted protein [Populus trichocarpa]

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 199/251 (79%), Positives = 222/251 (88%)

Query: 51  MVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLE 110
           MVQQAV G+PA YAKEMERLSAKESLLLAFKD+G FEALV G+TT+MQ+IDVNERI GLE
Sbjct: 1   MVQQAVHGSPAIYAKEMERLSAKESLLLAFKDSGSFEALVTGQTTDMQRIDVNERINGLE 60

Query: 111 RLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKAN 170
           RLNPTPRPTTSPFLEGRWNFEWFG+GSPG F ARFIFERFP   ANLS MD+VIKDG A 
Sbjct: 61  RLNPTPRPTTSPFLEGRWNFEWFGAGSPGLFAARFIFERFPKNFANLSKMDMVIKDGNAK 120

Query: 171 ITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAV 230
           +TAN KLL SIESKF   +KL VEGPLR+KEEY+EGILE+PT+IEET+PEQLKGAF QAV
Sbjct: 121 VTANMKLLYSIESKFILLSKLTVEGPLRMKEEYVEGILETPTIIEETVPEQLKGAFGQAV 180

Query: 231 TTVQQLPAPIRDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIPEVLTRLDPPSS 290
            TVQQLP PIRD+ S GL+IPL+ TFQRLFMISYLD+EILI+RDA+G+PEVLTRLD P+S
Sbjct: 181 HTVQQLPVPIRDSFSSGLKIPLTSTFQRLFMISYLDDEILIVRDAAGVPEVLTRLDAPAS 240

Query: 291 PIEEPITEYES 301
           P+ EP  EYES
Sbjct: 241 PMAEPTAEYES 251

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807353|ref|NP_001242119.1| uncharacterized protein LOC100779837 [Glycine max] gi|255641773|gb|ACU21156.1| unknown [Glycine max]

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 200/258 (77%), Positives = 222/258 (86%)

Query: 44  RRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVN 103
           +R  C+AMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALV+GKTT  Q+IDVN
Sbjct: 53  KRWGCRAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVSGKTTEWQKIDVN 112

Query: 104 ERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVV 163
           ERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPG F ARFIFE FP TLANLS MD V
Sbjct: 113 ERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGLFAARFIFETFPSTLANLSKMDFV 172

Query: 164 IKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLK 223
           IKDG A ITAN +LLNSIE+K   STKL VEGPLR+KEEY+EG+  +PT+IEE +PEQLK
Sbjct: 173 IKDGNAKITANMRLLNSIENKVILSTKLSVEGPLRMKEEYVEGVFVTPTIIEERVPEQLK 232

Query: 224 GAFNQAVTTVQQLPAPIRDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIPEVLT 283
           GA  QA   +QQLPAPIRD ++ GL++PLSG+FQRLFMISYLDEEILIIR+ +GIPEVLT
Sbjct: 233 GALGQAANALQQLPAPIRDPVASGLKVPLSGSFQRLFMISYLDEEILIIRNTAGIPEVLT 292

Query: 284 RLDPPSSPIEEPITEYES 301
           RLD   S + +   EYES
Sbjct: 293 RLDAAPSILGDSSPEYES 310

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|373431037|gb|AEY70471.1| plastid lipid-associated protein [Vitis pseudoreticulata]

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/315 (65%), Positives = 245/315 (77%), Gaps = 15/315 (4%)

Query: 1   MASLQASLPSISAIWS-----SFPDSSSINSASIVTLTSSPANDRRI---RRRLR----- 47
           MA +Q   P+ SAI +       P S+S+  AS+V++++   N RR+   RR  R     
Sbjct: 1   MALVQGIAPATSAIRTPRSLLYSPHSASL-IASLVSVSAPLENGRRVLVGRRFGRISEAR 59

Query: 48  -CKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERI 106
            C+AMVQQA QGAPA YAKEMERLSAKESLLLAFKD+GGFEALV GKTT MQ IDVNERI
Sbjct: 60  VCRAMVQQAAQGAPATYAKEMERLSAKESLLLAFKDSGGFEALVTGKTTEMQSIDVNERI 119

Query: 107 TGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKD 166
           TGLERLNPTPRPTTSP+LEG+WN EWFG+G PG   ARF+F+ FP  LANLS +DVVIKD
Sbjct: 120 TGLERLNPTPRPTTSPYLEGQWNLEWFGTGKPGSLAARFLFQIFPSALANLSKVDVVIKD 179

Query: 167 GKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAF 226
                T N KLLNS+ESK   +++L VEGPLRLKEEY+E +LESP V+EE++PEQLKGAF
Sbjct: 180 SYGKTTVNLKLLNSVESKIVLNSRLSVEGPLRLKEEYVEAVLESPKVVEESVPEQLKGAF 239

Query: 227 NQAVTTVQQLPAPIRDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIPEVLTRLD 286
            QAV+T QQLP P++DAIS GL+IPL+G FQR+ MISYLDEEILI+RD +GIPEVL+RLD
Sbjct: 240 GQAVSTAQQLPVPVKDAISSGLKIPLNGRFQRMLMISYLDEEILILRDTTGIPEVLSRLD 299

Query: 287 PPSSPIEEPITEYES 301
            P S + EP TEYES
Sbjct: 300 VPPSTMAEPATEYES 314

Source: Vitis pseudoreticulata

Species: Vitis pseudoreticulata

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356500445|ref|XP_003519042.1| PREDICTED: probable plastid-lipid-associated protein 13, chloroplastic-like [Glycine max]

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 200/262 (76%), Positives = 223/262 (85%)

Query: 40  RRIRRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQ 99
           R   +R  C+AMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALV+GKTT  Q+
Sbjct: 38  RGSNKRSGCRAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVSGKTTEWQK 97

Query: 100 IDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSN 159
           IDVNERITGLERLNPTPRPTTSPFLEG+WNFEWFGSGSPG F ARFIFE FP TLANLS 
Sbjct: 98  IDVNERITGLERLNPTPRPTTSPFLEGQWNFEWFGSGSPGLFAARFIFEIFPSTLANLSK 157

Query: 160 MDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIP 219
           MDVVIKDG A ITAN +LLNSIE+K   STKL VEGPLR+KEEY+EG+L +PT+IEE +P
Sbjct: 158 MDVVIKDGNAKITANMRLLNSIENKVILSTKLSVEGPLRMKEEYVEGVLVTPTIIEERVP 217

Query: 220 EQLKGAFNQAVTTVQQLPAPIRDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIP 279
           EQLKGA  QA   +QQLP PI D ++ GL++PLSG+FQRLFMISYLDEEILIIR+ +GIP
Sbjct: 218 EQLKGALGQAANALQQLPTPIWDPVASGLKVPLSGSFQRLFMISYLDEEILIIRNTAGIP 277

Query: 280 EVLTRLDPPSSPIEEPITEYES 301
           EVLTRLD   S + +   EYES
Sbjct: 278 EVLTRLDAAPSSLGDSSPEYES 299

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225441447|ref|XP_002279430.1| PREDICTED: probable plastid-lipid-associated protein 13, chloroplastic isoform 1 [Vitis vinifera] gi|147776499|emb|CAN71890.1| hypothetical protein VITISV_040863 [Vitis vinifera]

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 206/315 (65%), Positives = 245/315 (77%), Gaps = 15/315 (4%)

Query: 1   MASLQASLPSISAIWS-----SFPDSSSINSASIVTLTSSPANDRRI---RRRLR----- 47
           MA +Q   P+ SAI +       P S+S+  AS+V++++   N RR+   RR  R     
Sbjct: 1   MALVQGIAPATSAIRTPRSLLYSPHSASL-IASLVSVSAPLENGRRVLVGRRFGRISEAR 59

Query: 48  -CKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERI 106
            C+AMVQQA QGAPA YAKEMERLSAKESLLLAFKD+GGFEALV GKTT MQ IDVNERI
Sbjct: 60  VCRAMVQQAAQGAPATYAKEMERLSAKESLLLAFKDSGGFEALVTGKTTEMQSIDVNERI 119

Query: 107 TGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKD 166
           TGLERLNPTPRPTTSP+LEG+WN EWFG+G PG   ARF+F+ FP  LA+LS +DVVIKD
Sbjct: 120 TGLERLNPTPRPTTSPYLEGQWNLEWFGTGKPGSLAARFLFQIFPSALAHLSKVDVVIKD 179

Query: 167 GKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAF 226
                T N KLLNS+ESK   +++L VEGPLRLKEEY+E +LESP V+EE++PEQLKGAF
Sbjct: 180 SYGKTTVNLKLLNSVESKIVLNSRLSVEGPLRLKEEYVEAVLESPKVVEESVPEQLKGAF 239

Query: 227 NQAVTTVQQLPAPIRDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIPEVLTRLD 286
            QAV+T QQLP P++DAIS GL+IPL+G FQR+ MISYLDEEILI+RD +GIPEVL+RLD
Sbjct: 240 GQAVSTAQQLPVPVKDAISSGLKIPLNGRFQRMLMISYLDEEILILRDTTGIPEVLSRLD 299

Query: 287 PPSSPIEEPITEYES 301
            P S + EP TEYES
Sbjct: 300 VPPSTMAEPATEYES 314

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255644645|gb|ACU22825.1| unknown [Glycine max]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/262 (75%), Positives = 222/262 (84%)

Query: 40  RRIRRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQ 99
           R   +R  C+AMVQQAVQGAPAAYAKEMERLSAKESL LAFKDAGGFEALV+GKTT  Q+
Sbjct: 38  RGSNKRSGCRAMVQQAVQGAPAAYAKEMERLSAKESLFLAFKDAGGFEALVSGKTTEWQK 97

Query: 100 IDVNERITGLERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSN 159
           IDVNERITGLERLNPTPRPTTSPFLEG+WNFEWFGSGSPG F ARFIFE FP TLANLS 
Sbjct: 98  IDVNERITGLERLNPTPRPTTSPFLEGQWNFEWFGSGSPGLFAARFIFEIFPSTLANLSK 157

Query: 160 MDVVIKDGKANITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIP 219
           MDVVIKDG A ITAN +LLNSIE+K   STKL VEGPLR+KEEY+EG+L +PT+IEE +P
Sbjct: 158 MDVVIKDGNAKITANMRLLNSIENKVILSTKLSVEGPLRMKEEYVEGVLVTPTIIEERVP 217

Query: 220 EQLKGAFNQAVTTVQQLPAPIRDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIP 279
           EQLKGA  QA   +QQLP PI D ++ GL++PLSG+FQRLFMISYLDEEILIIR+ +GIP
Sbjct: 218 EQLKGALGQAANALQQLPTPIWDPVASGLKVPLSGSFQRLFMISYLDEEILIIRNTAGIP 277

Query: 280 EVLTRLDPPSSPIEEPITEYES 301
           EVLTRLD   S + +   EYES
Sbjct: 278 EVLTRLDAAPSSLGDSSPEYES 299

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437579|ref|XP_004136569.1| PREDICTED: probable plastid-lipid-associated protein 13, chloroplastic-like [Cucumis sativus] gi|449525291|ref|XP_004169651.1| PREDICTED: probable plastid-lipid-associated protein 13, chloroplastic-like [Cucumis sativus]

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 198/252 (78%), Positives = 218/252 (86%), Gaps = 1/252 (0%)

Query: 50  AMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGL 109
           AMVQQA QGAPA YAKEMERLSAKESLLLAFKD+GGFEALV GKTT+MQ+IDVNERITGL
Sbjct: 53  AMVQQAAQGAPAIYAKEMERLSAKESLLLAFKDSGGFEALVTGKTTDMQRIDVNERITGL 112

Query: 110 ERLNPTPRPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKA 169
           ERLNPTPRPTTSPFLEGRWNFEWFGSGSPG   A  +F+RFP TLA LS +D  IKDG A
Sbjct: 113 ERLNPTPRPTTSPFLEGRWNFEWFGSGSPGL-AATILFQRFPSTLATLSKLDAFIKDGTA 171

Query: 170 NITANFKLLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQA 229
            ITAN KLLNSIESK   STKL VEGPLRLKEEYIEGI+E+P+V E+ +PEQLK AF Q 
Sbjct: 172 RITANVKLLNSIESKVILSTKLSVEGPLRLKEEYIEGIIETPSVSEQAVPEQLKSAFGQV 231

Query: 230 VTTVQQLPAPIRDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIPEVLTRLDPPS 289
           V TVQQLP PI+D I+GGLR+PL+G++QRL MISYLDEEILIIRDASG+PEVLTRLD P 
Sbjct: 232 VNTVQQLPVPIKDVIAGGLRVPLAGSYQRLMMISYLDEEILIIRDASGVPEVLTRLDSPP 291

Query: 290 SPIEEPITEYES 301
           SP+E   T+YES
Sbjct: 292 SPLEPNTTDYES 303

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	301
TAIR|locus:2060020	299	AT2G42130 [Arabidopsis thalian	0.993	1.0	0.651	4.5e-98
TAIR|locus:2095803	308	PGL34 "plastoglobulin 34kD" [A	0.990	0.967	0.602	7.8e-94
UNIPROTKB|P80471	326	P80471 "Light-induced protein,	0.744	0.687	0.250	1.8e-05
TAIR|locus:2136627	318	FIB "fibrillin" [Arabidopsis t	0.704	0.666	0.233	2.2e-05
TAIR|locus:2062497	376	AT2G35490 [Arabidopsis thalian	0.584	0.468	0.28	2.4e-05
UNIPROTKB|O99019	326	O99019 "Light-induced protein,	0.744	0.687	0.250	4e-05
TAIR|locus:2132006	310	AT4G22240 [Arabidopsis thalian	0.774	0.751	0.227	0.00023

TAIR|locus:2060020 AT2G42130 [Arabidopsis thaliana (taxid:3702)]

 Score = 974 (347.9 bits), Expect = 4.5e-98, P = 4.5e-98
 Identities = 196/301 (65%), Positives = 227/301 (75%)

Query:     1 MASLQASLPSISAIWSSFPDSSSINSASIVTLTSSPANDRRIRRRLRCKAMVQQAVQGAP 60
             MA +  S+P  SA+   F  S+S +   +             RRR+  +AMVQ+ VQG+P
Sbjct:     1 MALIHGSVPGTSAVRLVFSTSASPSRFCLNVPVVKQGWKNSCRRRV-LRAMVQETVQGSP 59

Query:    61 AAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTT 120
               YA+EMERLSAKESLLLA KDAGGFEALV GKTTNMQ+IDVNERIT LERLNPTPRPTT
Sbjct:    60 LVYAREMERLSAKESLLLALKDAGGFEALVTGKTTNMQRIDVNERITSLERLNPTPRPTT 119

Query:   121 SPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNS 180
             SP  EGRWNFEWFGSGSPG   AR IFERFP TLANLS M+++IKD  A  TAN KLLNS
Sbjct:   120 SPCFEGRWNFEWFGSGSPGLLAARVIFERFPSTLANLSRMEILIKDANAKATANIKLLNS 179

Query:   181 IESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQLPAPI 240
             IESK   S+KL VEGPLRLKEEY+EG+LE+PTVIEE +PEQLK A  QA TT+QQLPA I
Sbjct:   180 IESKIILSSKLTVEGPLRLKEEYVEGMLETPTVIEEAVPEQLKSALGQAATTLQQLPALI 239

Query:   241 RDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIPEVLTRLDXXXXXXXXXXTEYE 300
             +D ++ GLRIPLSG+F+R FMISYLDEEILI+RD  G+PEVLTR++           EY+
Sbjct:   240 KDTLASGLRIPLSGSFERFFMISYLDEEILIVRDTEGVPEVLTRIETPSSTVVETI-EYD 298

Query:   301 S 301
             S
Sbjct:   299 S 299

GO:0005198 "structural molecule activity" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0010027 "thylakoid membrane organization" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

TAIR|locus:2095803 PGL34 "plastoglobulin 34kD" [Arabidopsis thaliana (taxid:3702)]

 Score = 934 (333.8 bits), Expect = 7.8e-94, P = 7.8e-94
 Identities = 182/302 (60%), Positives = 230/302 (76%)

Query:     1 MASLQ-ASLPSISAIWSSFPDSSSINSAS--IVTLTSSPANDRR-IRRRLRCKAMVQQAV 56
             MA +Q  S+   SA+  SF  S S  S+S  +  ++ +  ++++   RR+ C+AMVQ +V
Sbjct:     1 MALIQHGSVSGTSAVRLSFSSSVSPPSSSPPLSRVSLNFQSEKKSCYRRMICRAMVQDSV 60

Query:    57 QGAPAAYAKEMERLSAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTP 116
             QG P+ YA+EMERLSAKESL+LAF DAGGFEALV GK T+MQ+IDVNERIT LERLNPTP
Sbjct:    61 QGIPSVYAREMERLSAKESLILAFNDAGGFEALVTGKITDMQKIDVNERITNLERLNPTP 120

Query:   117 RPTTSPFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFK 176
             RPTTSP+LEGRW+FEWFG  +PG    R +FERFP TL +LSNM++ IKD     TAN K
Sbjct:   121 RPTTSPYLEGRWSFEWFGVNTPGSLAVRVMFERFPSTLVSLSNMEIFIKDNNTKATANIK 180

Query:   177 LLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAFNQAVTTVQQL 236
             LLNSIE+K + S+KL +EGPLR+KEEY+EG+LESPTVIEE +P+QL+G   QA TT+QQL
Sbjct:   181 LLNSIENKITLSSKLTIEGPLRMKEEYLEGLLESPTVIEEAVPDQLRGLLGQATTTLQQL 240

Query:   237 PAPIRDAISGGLRIPLSGTFQRLFMISYLDEEILIIRDASGIPEVLTRLDXXXXXXXXXX 296
             P PI+D ++ GLRIPL GT+QR FMISYLD+EILI+RD +G+PEVLTR++          
Sbjct:   241 PEPIKDTLANGLRIPLGGTYQRFFMISYLDDEILIVRDTAGVPEVLTRVETSSPMSSSSV 300

Query:   297 TE 298
              E
Sbjct:   301 VE 302

GO:0005198 "structural molecule activity" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

UNIPROTKB|P80471 P80471 "Light-induced protein, chloroplastic" [Solanum tuberosum (taxid:4113)]

 Score = 126 (49.4 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 63/251 (25%), Positives = 108/251 (43%)

Query:    52 VQQAVQGAPAAYAKEMERLSAKESLL---LAFKDAGGFEALVAGKTTNMQQIDVNERITG 108
             V+Q   G  A   +E  +  ++  LL   LA    G    L A   T   + ++ E IT 
Sbjct:    77 VEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSASSET---RAEIVELITQ 133

Query:   109 LERLNPTPRPTTS-PFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDG 167
             LE  NP P PT +   L G+W   +  +   G F    +  R    L  +  +   I D 
Sbjct:   134 LESKNPNPAPTEALTLLNGKWILAY--TSFSGLFP---LLSRGNLPLVRVEEISQTI-DS 187

Query:   168 KANITANFKLLNSIESKFSFST--KLLVEGPLRLKEEYIEGILESPTVIEETI-PEQLK- 223
             ++    N  +     +  S ST  K  V  P R++ ++ EGI+ +P + +  + PE ++ 
Sbjct:   188 ESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIVLPENVEF 247

Query:   224 -------GAFNQAVTTVQQLPAPIRDAISGG--LRIPLSGT-FQRLFMISYLDEEILIIR 273
                      F   +T+VQ   + +  +IS    ++ P++    Q   + +YLD+E+ I R
Sbjct:   248 LGQKIDLSPFKGLITSVQDTASSVAKSISSQPPIKFPITNNNAQSWLLTTYLDDELRISR 307

Query:   274 DASGIPEVLTR 284
               +G   VL +
Sbjct:   308 GDAGSVFVLIK 318

GO:0003674 "molecular_function" evidence=ND

GO:0006950 "response to stress" evidence=IEP

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

TAIR|locus:2136627 FIB "fibrillin" [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 2.2e-05, P = 2.2e-05
 Identities = 55/236 (23%), Positives = 99/236 (41%)

Query:    65 KEMERLSAKESLLLAFKDA--GGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTTSP 122
             K +E +   E L  +  D+  G    L     T   + +++E IT LE  NPTP P  + 
Sbjct:    83 KAIESVEETERLKRSLADSLYGTDRGLSVSSDT---RAEISELITQLESKNPTPAPNEAL 139

Query:   123 FL-EGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDGKANITANFKLLNSI 181
             FL  G+W   +  +   G F    +  R  P L  +  +   I      +  + +     
Sbjct:   140 FLLNGKWILAY--TSFVGLFP--LLSRRIEP-LVKVDEISQTIDSDSFTVQNSVRFAGPF 194

Query:   182 ES-KFSFSTKLLVEGPLRLKEEYIEGILESPTVIEET-IPEQLK--------GAFNQAVT 231
              +  FS + K  +  P R++ ++ +G++ +P + +   IPE ++              +T
Sbjct:   195 STTSFSTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPESVEVLGQKIDLNPIKGLLT 254

Query:   232 TVQQLPAPIRDAISGG--LRIPL-SGTFQRLFMISYLDEEILIIRDASGIPEVLTR 284
             +VQ   + +   IS    L+  L S   Q   + +YLD+++ I R   G   VL +
Sbjct:   255 SVQDTASSVARTISNQPPLKFSLPSDNTQSWLLTTYLDKDLRISRGDGGSVYVLIK 310

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0010205 "photoinhibition" evidence=IMP

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

TAIR|locus:2062497 AT2G35490 [Arabidopsis thaliana (taxid:3702)]

 Score = 126 (49.4 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 56/200 (28%), Positives = 91/200 (45%)

Query:   101 DVNERITGLERLNPTPRPTTSP-FLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSN 159
             +V E +  LE LNPTP P  +P  L+G W   +         +        P  L  + +
Sbjct:   177 EVLELVNQLEALNPTPAPLENPELLDGNWVLLYTAFSE---LIPLLAAGSTP--LLKVKS 231

Query:   160 MDVVIKDGKANITANFKLLNSIESKFSFST--KLLVEGPLRLKEEYIEGILESPTVIEET 217
             +   I D    I  N   L+S  + FSFS      V  P R++  + EG L+ P +    
Sbjct:   232 ISQSI-DTNNLIIDNSTTLSSPFADFSFSATASFEVRSPSRIEVSFKEGTLKPPVIKSSV 290

Query:   218 -IPEQLKGAFNQAVTT--VQQLPAPIRD-------AISGG--LRIPLSGTFQRLFMIS-Y 264
              +PE + G F Q ++   ++Q   P++D       A+SG   L++P  G     ++++ Y
Sbjct:   291 DLPESV-GVFGQQISLSLLKQSLNPLQDVAANISRALSGQPPLKLPFPGNRGSSWLLTTY 349

Query:   265 LDEEILIIRDASGIPEVLTR 284
             LD+++ I R   G+  VL R
Sbjct:   350 LDKDLRISRGDGGL-FVLAR 368

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0009536 "plastid" evidence=IDA

UNIPROTKB|O99019 O99019 "Light-induced protein, chloroplastic" [Solanum demissum (taxid:50514)]

 Score = 123 (48.4 bits), Expect = 4.0e-05, P = 4.0e-05
 Identities = 63/251 (25%), Positives = 108/251 (43%)

Query:    52 VQQAVQGAPAAYAKEMERLSAKESLL---LAFKDAGGFEALVAGKTTNMQQIDVNERITG 108
             V+Q   G  A   +E  +  ++  LL   LA    G    L A   T   + ++ E IT 
Sbjct:    77 VEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSASSET---RAEIVELITQ 133

Query:   109 LERLNPTPRPTTS-PFLEGRWNFEWFGSGSPGFFVARFIFERFPPTLANLSNMDVVIKDG 167
             LE  NP P PT +   L G+W   +  +   G F    +  R    L  +  +   I D 
Sbjct:   134 LESKNPNPAPTEALTLLNGKWILAY--TSFSGLFP---LLSRGNLPLVRVEEISQTI-DS 187

Query:   168 KANITANFKLLNSIESKFSFST--KLLVEGPLRLKEEYIEGILESPTVIEETI-PEQLK- 223
             ++    N  +     +  S ST  K  V  P R++ ++ EGI+ +P + +  + PE ++ 
Sbjct:   188 ESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIVLPENVEF 247

Query:   224 -------GAFNQAVTTVQQLPAPIRDAISGG--LRIPLSGT-FQRLFMISYLDEEILIIR 273
                      F   +T+VQ   + +  +IS    ++ P++    Q   + +YLD+E+ I R
Sbjct:   248 LGQKIDVSPFKGLITSVQDTASSVVKSISSQPPIKFPITNNNAQSWLLTTYLDDELRIPR 307

Query:   274 DASGIPEVLTR 284
               +G   VL +
Sbjct:   308 GDAGSVFVLIK 318

GO:0003674 "molecular_function" evidence=ND

GO:0006950 "response to stress" evidence=IEP

GO:0009535 "chloroplast thylakoid membrane" evidence=ISS

TAIR|locus:2132006 AT4G22240 [Arabidopsis thaliana (taxid:3702)]

 Score = 116 (45.9 bits), Expect = 0.00023, P = 0.00023
 Identities = 59/259 (22%), Positives = 107/259 (41%)

Query:    43 RRRLRCKAMVQQAVQGAPAAYAKEMERLSAKESLLLAFKDA--GGFEALVAGKTTNMQQI 100
             RR  + +A     +  A  A  + +E +   E L  +  D+  G    L A   T   + 
Sbjct:    53 RRVFKVRATDTGEIGSALLAAEEAIEDVEETERLKRSLVDSLYGTDRGLSASSET---RA 109

Query:   101 DVNERITGLERLNPTPRPTTSPFL-EGRWNFEWFGSGSPGFFVARF-IFERFPPTLANLS 158
             ++ + IT LE  NPTP PT + FL  G+W   +        FV  F +  R    L  + 
Sbjct:   110 EIGDLITQLESKNPTPAPTEALFLLNGKWILAYTS------FVNLFPLLSRGIVPLIKVD 163

Query:   159 NMDVVIKDGKANITANFKLLNSI-ESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEET 217
              +   I      +  + +    +  +  S + K  +  P R++ ++ +G++ +P + +  
Sbjct:   164 EISQTIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSI 223

Query:   218 -IPEQLK--------GAFNQAVTTVQQLPAPIRDAISGG--LRIPL-SGTFQRLFMISYL 265
              IPE ++              +T+VQ   + +   IS    L+  L +   Q   + +YL
Sbjct:   224 EIPEYVEVLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPLKFSLPADNAQSWLLTTYL 283

Query:   266 DEEILIIRDASGIPEVLTR 284
             D++I I R   G   VL +
Sbjct:   284 DKDIRISRGDGGSVFVLIK 302


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.133   0.375    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      301       291   0.00089  115 3  11 22  0.39    34
                                                     33  0.43    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  589 (63 KB)
  Total size of DFA:  176 KB (2103 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.74u 0.36s 23.10t   Elapsed:  00:00:01
  Total cpu time:  22.74u 0.36s 23.10t   Elapsed:  00:00:01
  Start:  Sat May 11 09:59:24 2013   End:  Sat May 11 09:59:25 2013

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8S9M1	PAP13_ARATH	No assigned EC number	0.6677	0.9933	1.0	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	301
pfam04755	196	pfam04755, PAP_fibrillin, PAP_fibrillin	4e-07

>gnl|CDD|218245 pfam04755, PAP_fibrillin, PAP_fibrillin

 Score = 49.0 bits (117), Expect = 4e-07
 Identities = 44/190 (23%), Positives = 71/190 (37%), Gaps = 33/190 (17%)

Query: 98  QQIDVNERITGLERLNPTPRPTTSPF-LEGRWNFEWFGSGSPGFFVARFIFERFPPTLAN 156
            + ++   +T LE LNPTP PT S   L G+W   +  + S        +     P L  
Sbjct: 24  DRAEIESAVTQLEALNPTPAPTESLDLLNGKWRLLY--TTSKELL--PLLARGRLPLLKV 79

Query: 157 LSNMDVVIKDGKANITANFKLLNSIE-----SKFSFST--KLLVEGPLRLKEEYIEGILE 209
                 +          N  + NS+      ++ SFS   K  +  P R++  +  G+L 
Sbjct: 80  GQIYQTI-------DVNNLTVYNSVTFSGPLAEGSFSVRAKFEIRSPKRVQIRFERGVLG 132

Query: 210 SPTVIEETIPEQLKGAFNQAVTTVQQLPAPIR-DAISGGLRIPLSGTFQR-LFMISYLDE 267
                              ++T +Q   + IR  +    L  PLSG   +     +YLDE
Sbjct: 133 ------------TPQLLKGSLTPLQDTASNIRGISSQLPLPFPLSGDRAKGWLETTYLDE 180

Query: 268 EILIIRDASG 277
           ++ I R   G
Sbjct: 181 DLRISRGDGG 190

This family identifies a conserved region found in a number of plastid lipid-associated proteins (PAPs), and in a number of putative fibrillin proteins. Length = 196

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	301
PF04755	198	PAP_fibrillin: PAP_fibrillin; InterPro: IPR006843	100.0

>PF04755 PAP_fibrillin: PAP_fibrillin; InterPro: IPR006843 This family identifies a conserved domain found in a number of plastid lipid-associated proteins (PAPs) that are thought to form together with other plastoglobulins a coat on the surface of the lipoprotein particle

Probab=100.00  E-value=5.5e-34  Score=252.33  Aligned_cols=192  Identities=24%  Similarity=0.410  Sum_probs=130.4

Q ss_pred             HHHHHHHHHHHhcCCCcccccCCCChHHHHHHHHHHHHHHHhCCCCCCCCC-CCCcceeEEEEeCCCCCCchhhhhhhhc
Q 022196           71 SAKESLLLAFKDAGGFEALVAGKTTNMQQIDVNERITGLERLNPTPRPTTS-PFLEGRWNFEWFGSGSPGFFVARFIFER  149 (301)
Q Consensus        71 ~aK~~Ll~al~d~~G~~gl~~g~at~~~r~~I~elI~~LEalNPt~~Pt~s-~~L~G~W~LlYTSs~SPgll~~r~L~~r  149 (301)
                      .+|++|++++.++.  +|+   .+++++|++|+++|.+||++||+++|+++ ++|+|+|+|+|||+.  +...  .+...
T Consensus         2 ~~K~~Ll~~~~~~~--rG~---~~~~~~~~~i~~~v~~LE~~np~~~p~~s~~~L~G~W~Lvytt~~--~~~~--~l~~~   72 (198)
T PF04755_consen    2 DLKQELLQAVAGTN--RGL---RASPEDREEIEELVEELEALNPTPDPADSLPLLDGRWELVYTTSP--EIRS--LLQRG   72 (198)
T ss_pred             hHHHHHHHHHhccC--CCc---cCCHHHHHHHHHHHHHHHHhCCCCCCcCCchhcCcEEEEEeecCC--Cccc--ccccc
Confidence            47899999999554  265   67999999999999999999999999998 889999999999974  3331  01111


Q ss_pred             CCccccCCCceeEEEecCc-cceeeceE--EeeeeeeEEEEEEEEEEeCCceEEEEEEEEEEeCCccccccchhHHHhhh
Q 022196          150 FPPTLANLSNMDVVIKDGK-ANITANFK--LLNSIESKFSFSTKLLVEGPLRLKEEYIEGILESPTVIEETIPEQLKGAF  226 (301)
Q Consensus       150 ~p~~l~~l~~l~v~iid~~-~k~~~~~~--~~N~v~~~~~v~A~fev~s~~Rv~v~F~~~~l~~p~i~~~~~P~~l~~~~  226 (301)
                      .+. ......+. +++|.. .+..|.+.  .++.+++.+.+.|+|++.+++|++++|+++.+..+.+..        .++
T Consensus        73 ~~~-~~~~~~v~-Q~id~~~~~~~N~v~~~~~~~~~~~~~v~a~~~~~~~~rv~v~f~~~~l~~~~~l~--------~~l  142 (198)
T PF04755_consen   73 RLP-GVRVGRVF-QTIDADNGRVENVVELSGFPLLEGSVSVRASLEVRSPRRVEVTFERASLKPPSLLK--------GVL  142 (198)
T ss_pred             ccc-cccccceE-EEEECCCceEEEEEEEeccCceEEEEEEEEEEEEccccEEEEEEEeeEEcccceee--------ccc
Confidence            111 11222232 244544 22222222  244457889999999999999999999999998766521        222


Q ss_pred             hccccccccCCchhhhhccCCcccCCCC-CceeeEEEEEecCceeEEecCCCcEEEEE
Q 022196          227 NQAVTTVQQLPAPIRDAISGGLRIPLSG-TFQRLFMISYLDEEILIIRDASGIPEVLT  283 (301)
Q Consensus       227 gq~i~~l~~l~~~l~~~~~~~lkiPl~~-~~~gwldiTYLDedLRIsRG~~GsvFVl~  283 (301)
                      ++.......++.....  ..++++|+++ ..+|||+||||||||||+||++|++|||.
T Consensus       143 ~~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~g~l~~tYLDedlRI~Rg~~G~~fVl~  198 (198)
T PF04755_consen  143 GPLKDALNNVPRGISD--ELPVPLPLPGGSPKGWLDTTYLDEDLRISRGNKGSLFVLK  198 (198)
T ss_pred             hhhhhhhhhccccccc--ccccccccCCCCCceEEEEEEECCCeEEEEcCCCCEEEeC
Confidence            2211122222211111  1244555554 34899999999999999999999999984

The coat may contain receptors for attachment to the thylakoid membrane as well as regulatory proteins that may function in the transfer of lipids to and from the thylakoid membranes.). This entry also represents a number of putative fibrillin proteins.; GO: 0005198 structural molecule activity, 0009507 chloroplast

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00