Citrus Sinensis ID: 022378

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------30
Protein Sequence
MLNTYPVVCGYYVKRPSTNSHANTTINDHESSAIHFRSPCCSETEVLSRFTTPSRYSSSRGSNNNNSFLHDELPAGEAPQNRLIIVDPHDDDGDGWYYGSSHKCLLICFRIIWKLLLSLGIVLLVYYMASKPPPPKISIKMAGVHQFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRKLYAASHGSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLIIRMSFRSNYRVVGDLIKSNFLHRSECFLFLHRNYDKRHATQVYNSTCAVTS
Secondary Structure (PSIPRED)
ccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccEEHHHHHHHHHHHHHHHHHHHEEEEEEcccccEEEEEEEEEEEEEEccccccccccccEEEEEEEEEEEEEccccEEEEEEEccEEEEEEccEEEEEccccccEEEccccEEEEEEEEEEEEEcccccccHHHHHcccccEEEEEEEEEEEEEEEEccEEEEEEEEEEEEEEEEEcccccccccEEccccEEEcc
Secondary Structure Prediction (SSPRO)
cccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEEEcccccccccccEEEEEEEEEEEEEccccEEEEEEccccEEEEEccEEEEccccccccccccccEEEEEEEEEcEEEcccccccHHcccccccccEEEEEEEEEEEEEEEEEEEcccEEEEEEEEEEEcccHccccEEEEcccEEEEcc
Coil and Loop (DISEMBL)
mlntypvvcgyyvkrpstnshanttindhessaihfrspccsetevlsrfttpsrysssrgsnnnnsflhdelpageapqnrliivdphdddgdgwyygsshkCLLICFRIIWKLLLSLGIVLLVYYmaskppppkisikMAGVhqfgigegvdgtgvatktltcncsidliidnksklfglhihppiiemsfgrfpfasshgrklyaashgsslfqlsfgtrnrpmygagrNMQDLLASRKGLPLIIRMSFRSNYRVVGDLIKSNFLHRSECFLFLhrnydkrhatqvynstcavts
Flexible Loop (DISEMBL)
MLNTYPVVCGYYVKRPSTNSHANTTINDHESSAIHFRSPCCSETEVLSRFTTpsrysssrgsnnnNSFLHDELPAGEAPQNRLIIVDPHDDDGDGWYYGSSHKCLLICFRIIWKLLLSLGIVLLVYYMASKPPPPKISIKMAGVHQFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRKLYAASHGSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLIIRMSFRSNYRVVGDLIKSNFLHRSECFLFLHRNYDKRHATQVYNSTCAVTS
Low Complexity Region (SEG)
MLNTYPVVCGYYVKRPSTNSHANTTINDHESSAIHFRSPCCSETEVLSRFTTPsrysssrgsnnnnsFLHDELPAGEAPQNRLIIVDPHdddgdgWYYGSSHKCLLICFRIIWKlllslgivllVYYMAskppppkisikMAGVHQFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRKLYAASHGSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLIIRMSFRSNYRVVGDLIKSNFLHRSECFLFLHRNYDKRHATQVYNSTCAVTS
Disordered region (IsUnstruct)
***TYPVVCGYYVK*********************F***CC****************************************RLIIVDPHDDDGDGWYYGSSHKCLLICFRIIWKLLLSLGIVLLVYYMASKPPPPKISIKMAGVHQFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRKLYAASHGSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLIIRMSFRSNYRVVGDLIKSNFLHRSECFLFLHRNYDKRHATQVYNSTC****
Disordered Region (DISOPRED)
****YPV*CGYYVKR*************************************************************************************SHKCLLICFRIIWKLLLSLGIVLLVYYMASKPPPPKISIKMAGVHQFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRKLYAASHGSSLFQLSFGTRNRPM******************LIIRMSFRSNYRVVGDLIKSNFLHRSECFLFLH*************STCAV**
Disordered Region (DISEMBL)
MLNTYPVVCGYYVKRPSTNSHANTTINDHESSAIHFRSPCCSETE*****************NNNNSFLHDELPAGEAPQNRLIIVDPHDDDGDGWYYGSSHKCLLICFRIIWKLLLSLGIVLLVYYMASKPPPPKISIKMAGVHQFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRKLYAASHGSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLIIRMSFRSNYRVVGDLIKSNFLHRSECFLFLHRNYDKRHATQVYNSTCAVTS
Disordered Region (DISPRO)
***TYPVVCGYYV*******************************************************************************GDGWYYGSSHKCLLICFRIIWKLLLSLGIVLLVYYMASKPPPPKISIKMAGVHQFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRKLYAASHGSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLIIRMSFRSNYRVVGDLIKSNFLHRSECFLFLHRNYDKRHATQVYNSTCAVT*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLNTYPVVCGYYVKRPSTNSHANTTINDHESSAIHFRSPCCSETEVLSRFTTPSRYSSSRGSNNNNSFLHDELPAGEAPQNRLIIVDPHDDDGDGWYYGSSHKCLLICFRIIWKLLLSLGIVLLVYYMASKPPPPKISIKMAGVHQFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRKLYAASHGSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLIIRMSFRSNYRVVGDLIKSNFLHRSECFLFLHRNYDKRHATQVYNSTCAVTS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	298
118481171	342	unknown [Populus trichocarpa]	0.979	0.853	0.527	9e-83
224059632	294	predicted protein [Populus trichocarpa]	0.922	0.935	0.538	1e-81
357458341	350	hypothetical protein MTR_3g033530 [Medic	0.959	0.817	0.446	2e-66
356555315	358	PREDICTED: uncharacterized protein LOC10	0.969	0.807	0.428	2e-65
449463787	347	PREDICTED: uncharacterized protein LOC10	0.939	0.806	0.423	6e-56
224104067	141	predicted protein [Populus trichocarpa]	0.473	1.0	0.687	5e-52
15231920	271	uncharacterized protein [Arabidopsis tha	0.845	0.929	0.425	1e-50
326498117	346	predicted protein [Hordeum vulgare subsp	0.929	0.800	0.372	3e-48
125542911	350	hypothetical protein OsI_10534 [Oryza sa	0.973	0.828	0.345	2e-46
115451567	350	Os03g0216500 [Oryza sativa Japonica Grou	0.973	0.828	0.345	2e-46

>gi|118481171|gb|ABK92537.1| unknown [Populus trichocarpa]

 Score =  312 bits (800), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 175/332 (52%), Positives = 216/332 (65%), Gaps = 40/332 (12%)

Query: 1   MLNTYPVVCGYYVKRPSTNSHANTTINDHESSAIH--FRSPCCSETEVL------SRFTT 52
           +  +YP  C YYV+ PST SHAN+      ++ I   F SP  S+T ++      SRFT 
Sbjct: 16  LFQSYP--CAYYVQSPSTISHANSADIKTNNNIIESTFHSPTRSDTILINKNPEVSRFTL 73

Query: 53  PSRYSSSRGSNNNNSFL-HDELPAGEAPQ-NRLIIVDPHDDD------------------ 92
            SRYSSSRGSNN  SFL   ++   E  + NRLIIVD H  +                  
Sbjct: 74  -SRYSSSRGSNN--SFLIEKKVSEPENNEVNRLIIVDGHGFNGDGGYEEEGMEEDEDFYY 130

Query: 93  ----GDGWYYGS---SHKCLLICFRIIWKLLLSLGIVLLVYYMASKPPPPKISIKMAGVH 145
               G  W Y S   S  C  +  +I W+L+LSL + LLV+Y A+KPPPPK SIK+AG+ 
Sbjct: 131 EERGGWWWRYCSFRRSSSCAWVSLQIFWRLVLSLCVALLVFYAATKPPPPKTSIKIAGIR 190

Query: 146 QFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRK 205
            FG+ EGVDG+GV TK L CNCSIDL+I+NKSKLFGLHI PP++EMSFG   FA+S G K
Sbjct: 191 LFGLAEGVDGSGVTTKILNCNCSIDLLIENKSKLFGLHIQPPVLEMSFGHLTFATSRGSK 250

Query: 206 LYAASHGSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLIIRMSFRSNYRVVGDLIKS 265
           LYA SH S+LFQL  GTRN+PMYGAG NMQD+L S  GLP++IR+S RSN+RVV +LIK 
Sbjct: 251 LYAQSHSSTLFQLFVGTRNKPMYGAGTNMQDMLESENGLPIVIRVSLRSNFRVVWNLIKP 310

Query: 266 NFLHRSECFLFLHRNYDKRHATQVYNSTCAVT 297
            F HR+ C L L   YDK+H TQVYNSTC ++
Sbjct: 311 AFHHRAVCLLVLDGAYDKKHRTQVYNSTCTMS 342

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224059632|ref|XP_002299943.1| predicted protein [Populus trichocarpa] gi|222847201|gb|EEE84748.1| predicted protein [Populus trichocarpa]

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 166/308 (53%), Positives = 206/308 (66%), Gaps = 33/308 (10%)

Query: 1   MLNTYPVVCGYYVKRPSTNSHANTTINDHESSAIH--FRSPCCSETEVL------SRFTT 52
           +  +YP  C YYV+ PST SHAN+      ++ I   F SP  S+T ++      SRFT 
Sbjct: 9   LFQSYP--CAYYVQSPSTISHANSADIKTNNNIIESTFHSPTRSDTILINKNPEVSRFTL 66

Query: 53  PSRYSSSRGSNNNNSFLHDELPAGEAPQNRLIIVDPHDDDGDGWYYGS---SHKCLLICF 109
            SRYSSSRGSNN  SFL ++  +G                   W Y S   S  C  +  
Sbjct: 67  -SRYSSSRGSNN--SFLIEKKVSGW-----------------WWRYCSFRRSSSCAWVSL 106

Query: 110 RIIWKLLLSLGIVLLVYYMASKPPPPKISIKMAGVHQFGIGEGVDGTGVATKTLTCNCSI 169
           +I W+L+LSL + LLV+Y A+KPPPPK SIK+AG+  FG+ EGVDG+GV TK L CNCSI
Sbjct: 107 QIFWRLVLSLCVALLVFYAATKPPPPKTSIKIAGIRLFGLAEGVDGSGVTTKILNCNCSI 166

Query: 170 DLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRKLYAASHGSSLFQLSFGTRNRPMYG 229
           DL+I+NKSKLFGLHI PP++EMSFG   FA+S G KLYA SH S+LFQL  GTRN+PMYG
Sbjct: 167 DLLIENKSKLFGLHIQPPVLEMSFGHLTFATSRGSKLYAQSHSSTLFQLFVGTRNKPMYG 226

Query: 230 AGRNMQDLLASRKGLPLIIRMSFRSNYRVVGDLIKSNFLHRSECFLFLHRNYDKRHATQV 289
           AG NMQD+L S  GLP++IR+S RSN+RVV +LIK  F HR+ C L L   YDK+H TQV
Sbjct: 227 AGTNMQDMLESENGLPIVIRVSLRSNFRVVWNLIKPAFHHRAVCLLVLDGAYDKKHRTQV 286

Query: 290 YNSTCAVT 297
           YNSTC ++
Sbjct: 287 YNSTCTMS 294

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357458341|ref|XP_003599451.1| hypothetical protein MTR_3g033530 [Medicago truncatula] gi|355488499|gb|AES69702.1| hypothetical protein MTR_3g033530 [Medicago truncatula]

 Score =  258 bits (659), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 150/336 (44%), Positives = 209/336 (62%), Gaps = 50/336 (14%)

Query: 4   TYPVVCGYYVKRPSTNSHANTT------INDHESSAIHFRSPCCSET--------EVLSR 49
           TYP  CGYYV+ PST SHAN+        ND ES+   F SP  SET        +  +R
Sbjct: 24  TYP--CGYYVQSPSTVSHANSIDKHSNIQNDTEST---FHSPNRSETLPINPVHEQEPNR 78

Query: 50  FTTPSRYSSSRGSNNNNSFLHDELPA--GEAPQN----RLIIVDPH-----DDDGDGWY- 97
           F    RYSSSRGSNN  SFLH +  +  G A +N     L+IV+       D++  G + 
Sbjct: 79  FAL-CRYSSSRGSNN--SFLHHKKVSYDGTATENGDDHHLMIVNDSGSVVSDEEEKGLFD 135

Query: 98  ---------------YGSSHKCLLICFRIIWKLLLSLGIVLLVYYMASKPPPPKISIKMA 142
                          Y +S  C  I  ++ W++++S G  LLV+Y+A+KPP PKIS ++A
Sbjct: 136 EYYYEKNGGWKRYFSYHNSDSCAWIWLQVTWRVMVSFGFALLVFYIATKPPTPKISFEIA 195

Query: 143 GVHQFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSH 202
            + +F +GEGVD TGV TK LTCNCS++LI++NKS+ FGLHI PP ++M F   PFA S+
Sbjct: 196 RIPEFKLGEGVDRTGVTTKILTCNCSMNLIVENKSRFFGLHIRPPKMDMKFSILPFAFSN 255

Query: 203 GRKLYAASHGSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLIIRMSFRSNYRVVGDL 262
           G +LYA S G ++F L    +N+PMYGAGR+M+D+L S +GLP++I+++  S++ VV  L
Sbjct: 256 GPELYAES-GLTVFPLQLEVKNKPMYGAGRSMEDMLDSGRGLPILIQVTLSSSFEVVPAL 314

Query: 263 IKSNFLHRSECFLFLHRNYDKRHATQVYNSTCAVTS 298
           +K  F HR EC + L + Y+K+H +Q +NSTC VTS
Sbjct: 315 VKPKFHHRVECIVVLKKTYNKKHHSQAFNSTCKVTS 350

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555315|ref|XP_003545979.1| PREDICTED: uncharacterized protein LOC100792233 [Glycine max]

 Score =  255 bits (651), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 149/348 (42%), Positives = 207/348 (59%), Gaps = 59/348 (16%)

Query: 1   MLNTYPVVCGYYVKRPSTNSHANTT------INDHESSAIHFRSPCCSET---------- 44
           M   YP  C YYV+ PST SHAN+        ND ES+   F SP  SET          
Sbjct: 20  MYQNYP--CAYYVQSPSTLSHANSADIRSNIQNDAEST---FHSPNRSETTHPLNPTHEE 74

Query: 45  EVLSRFTTPSRYSSSRGSNNNNSFLHDELPAGEAPQ---------NRLIIV--------- 86
           +  SRF    RY+SSRGS++  SFLH +  + +            NRL+I+         
Sbjct: 75  DEASRFAL-CRYTSSRGSSH--SFLHHKKISYDGSHATATENGDVNRLVIIDGGGDDKGD 131

Query: 87  -DPHDDDGD-----------GWY----YGSSHKCLLICFRIIWKLLLSLGIVLLVYYMAS 130
            + + ++G            GW     Y +S  C  I  ++ W++L+S GI LLV+Y+A+
Sbjct: 132 ENENVEEGSFYEYYYGKRKGGWKRFFSYRNSDSCAWIWLQMGWRILVSFGIALLVFYIAT 191

Query: 131 KPPPPKISIKMAGVHQFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIE 190
           KPPPP +S+++A   +F + EG+D +GV TK LTCNCS++LII+NKS+ FGLHI PP ++
Sbjct: 192 KPPPPNVSVEIARFPEFKLAEGIDRSGVTTKILTCNCSLNLIIENKSRFFGLHIRPPTMD 251

Query: 191 MSFGRFPFASSHGRKLYAASHGSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLIIRM 250
           M F   PFA S+  +LYA S G ++F L  G +N+PMYGAGR+MQD+L S  GLPL+IR+
Sbjct: 252 MKFSNLPFAFSNAPELYAES-GITIFALQLGAKNKPMYGAGRSMQDMLDSGTGLPLVIRV 310

Query: 251 SFRSNYRVVGDLIKSNFLHRSECFLFLHRNYDKRHATQVYNSTCAVTS 298
              S+++VV  LIK  F H +EC +FL + YDK+H T  ++STC VTS
Sbjct: 311 ILSSSFKVVPSLIKPRFHHHAECLVFLKKAYDKKHRTLAFDSTCKVTS 358

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463787|ref|XP_004149613.1| PREDICTED: uncharacterized protein LOC101209149 [Cucumis sativus] gi|449518423|ref|XP_004166241.1| PREDICTED: uncharacterized LOC101209149 [Cucumis sativus]

 Score =  223 bits (569), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 141/333 (42%), Positives = 186/333 (55%), Gaps = 53/333 (15%)

Query: 1   MLNTYPVVCGYYVKRPSTNSHANTTI--NDHESSAIHFRSPCCSET-------------E 45
           + ++YP  C YYV+ PST SHAN++   N  E S  H  SP  S+T             +
Sbjct: 26  LFHSYP--CAYYVQSPSTLSHANSSDIRNPAEVSTCH--SPLPSDTFPNAHHHHHRNPTQ 81

Query: 46  VLSRFTTPSRYSSSRGSNNNNSFLHDELPAGEAPQNRLII-------------------- 85
             SRFT  S YSSSRGSN+           GEA   RLI+                    
Sbjct: 82  EASRFTL-SHYSSSRGSNHGAG-----TDNGEA---RLIVGRGNGGDCEEEEEEGEGNEE 132

Query: 86  VDPHDDDGDGW----YYGSSHKCLLICFRIIWKLLLSLGIVLLVYYMASKPPPPKISIKM 141
                     W     Y +S     IC ++ W+ + S+GI LLV+Y+ + PP P I++K+
Sbjct: 133 GYYGKRKRGCWKRYFTYRNSDSNAWICLQLSWRAIFSMGIALLVFYIVTNPPSPIITVKV 192

Query: 142 AGVHQFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASS 201
             + +F +GEGVD TGV TK LTCNC++D+I+DN SKLFGLHI PP + MSFG  P A+S
Sbjct: 193 GEIEEFMLGEGVDKTGVGTKILTCNCTMDVIVDNHSKLFGLHILPPSLHMSFGPLPIAAS 252

Query: 202 HGRKLYAASHGSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLIIRMSFRSNYRVVGD 261
            G +LYA S G + F+LS GT N+ MYGAGR+M+D L S  GL L IR++F SNYRVV  
Sbjct: 253 QGPRLYAES-GRTRFRLSVGTSNKAMYGAGRDMEDKLDSGIGLELTIRLNFISNYRVVWK 311

Query: 262 LIKSNFLHRSECFLFLHRNYDKRHATQVYNSTC 294
            I  +F    +C L L + YD+   T+ +NSTC
Sbjct: 312 FISPHFHRHVQCLLLLRKPYDRNPHTRSFNSTC 344

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224104067|ref|XP_002313304.1| predicted protein [Populus trichocarpa] gi|222849712|gb|EEE87259.1| predicted protein [Populus trichocarpa]

 Score =  210 bits (535), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 97/141 (68%), Positives = 117/141 (82%)

Query: 137 ISIKMAGVHQFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRF 196
           +SIKMAG+ QFG+GEGVDG+GV TK LTCNCSIDL+I+NKSK+FGLH+ PPI+EMSFG  
Sbjct: 1   MSIKMAGIRQFGLGEGVDGSGVTTKILTCNCSIDLLIENKSKIFGLHVQPPILEMSFGHL 60

Query: 197 PFASSHGRKLYAASHGSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLIIRMSFRSNY 256
            FA S G KLYA SH S+LFQLS GTRN+PMYGAGRNMQD+L S  GLP++I++S RSN+
Sbjct: 61  RFAMSRGSKLYAQSHTSTLFQLSVGTRNKPMYGAGRNMQDMLESGNGLPIVIQLSLRSNF 120

Query: 257 RVVGDLIKSNFLHRSECFLFL 277
           RVV +LIK  F H++ C L L
Sbjct: 121 RVVWNLIKPKFHHQALCLLVL 141

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15231920|ref|NP_187462.1| uncharacterized protein [Arabidopsis thaliana] gi|12321556|gb|AAG50832.1|AC074395_6 hypothetical protein [Arabidopsis thaliana] gi|49660145|gb|AAT68363.1| hypothetical protein At3g08490 [Arabidopsis thaliana] gi|50058945|gb|AAT69217.1| hypothetical protein At3g08490 [Arabidopsis thaliana] gi|332641115|gb|AEE74636.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  206 bits (523), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/282 (42%), Positives = 158/282 (56%), Gaps = 30/282 (10%)

Query: 10  GYYVKRPSTNSHANTTINDHESSAIHFRSPCCSETE--VLSRFTTPSRYSSSRGSNNNNS 67
            Y+V+ PST  H      D ES    F+SP  S++   VLS      RYS    ++ NN 
Sbjct: 10  NYFVQSPSTVFH------DPESE---FQSPIRSDSAPLVLSSVNEFPRYSDFLRNSENNF 60

Query: 68  FLHDELPAGEAPQNRLIIVDPHDDDGDGWYYGSSHKCLLICFRIIWKLLLSLGIVLLVYY 127
              D+       + RL+ +            G+S+    I  ++ W+ L SLG+ LLV+Y
Sbjct: 61  LYEDD-------EKRLVPL------------GTSNSSWWIVLQVGWRFLFSLGVALLVFY 101

Query: 128 MASKPPPPKISIKMAGVHQFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPP 187
           +A++PP P IS ++   +QF + EGVD  GV+TK LT NCS  LIIDNKS +FGLHIHPP
Sbjct: 102 IATQPPHPNISFRIGRFNQFMLEEGVDSHGVSTKFLTFNCSTKLIIDNKSNVFGLHIHPP 161

Query: 188 IIEMSFGRFPFASSHGRKLYAASHGSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLI 247
            I+  FG   FA + G KLY  SH S+ FQL   T NR MYGAG  M D+L SR GLPLI
Sbjct: 162 SIKFFFGPLNFAKAQGPKLYGLSHESTTFQLYIATTNRAMYGAGTEMNDMLLSRAGLPLI 221

Query: 248 IRMSFRSNYRVVGDLIKSNFLHRSECFLFLHRNYDKRHATQV 289
           +R S  S+YRVV ++I   + H+ EC L L       H T +
Sbjct: 222 LRTSIISDYRVVWNIINPKYHHKVECLLLLADKERHSHVTMI 263

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326498117|dbj|BAJ94921.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/317 (37%), Positives = 173/317 (54%), Gaps = 40/317 (12%)

Query: 5   YPVVCGYYVKRPSTNSHANTTINDHESSAI-------HFRSPCCSET---------EVLS 48
           +P  C YYV+ PS  SH  +      ++ I        + +P  S+          +  S
Sbjct: 16  HPSPCAYYVQSPSAASHTLSHPASESTALILSPFPEAAYATPRRSDDAGAGRHEHDQEAS 75

Query: 49  RFTTPSRYSSSRGSNNNNSFLHDELPAGE-----APQNRLIIVDPHDDDGDG-------- 95
           R    SRYSSSRGSNN  SFL D+ P+G      A Q   ++     DDGDG        
Sbjct: 76  RLAL-SRYSSSRGSNN--SFLTDKKPSGGGGGRGARQVLRVVSGRSSDDGDGDGAEKRSG 132

Query: 96  -WYY---GSSHKCLLICFRIIWKLLLSLGIVLLVYYMASKPPPPKISIKMAGVHQFGIGE 151
            W Y        C  I  ++ W++ +S+ I LLV+ +A++P  P +S ++  V +F +GE
Sbjct: 133 AWRYVKLDPEAPCCCIALQVAWRVAVSVAIALLVFVVATRPARPGVSFRVGKVERFSLGE 192

Query: 152 GVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSH---GRK-LY 207
           G+DG+GV T  L CNCS+++ ++N SK+F LH+ PP ++MSFG F FA+S    GR  + 
Sbjct: 193 GLDGSGVITSFLNCNCSVEMAVENHSKVFSLHLLPPRLDMSFGHFTFATSQQGEGRPYVV 252

Query: 208 AASHGSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLIIRMSFRSNYRVVGDLIKSNF 267
               G++  +L    + +PMY AGR MQDLL S KG+P+ I +  RS YRVVG L++  +
Sbjct: 253 VRPRGATTVRLFVAAQEKPMYAAGRGMQDLLESGKGVPVAITVRSRSRYRVVGSLVRLTY 312

Query: 268 LHRSECFLFLHRNYDKR 284
            H S+C L+L R   +R
Sbjct: 313 RHDSQCVLYLRRRTPRR 329

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125542911|gb|EAY89050.1| hypothetical protein OsI_10534 [Oryza sativa Indica Group]

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/333 (34%), Positives = 172/333 (51%), Gaps = 43/333 (12%)

Query: 5   YPVVCGYYVKRPSTNSHANTTINDHESSAI--------HFRSPCCSET------------ 44
           +P  C YYV+ PS  SH   +    ES+AI         F +P  S              
Sbjct: 18  HPSPCAYYVQSPSAASH-TLSHPASESTAIILSPFPDAAFAAPRHSRVVDDATAHDHDVD 76

Query: 45  EVLSRFTTPSRYSSSRGSNNNNSFLHDELPAGEAPQNRLII-------------VDPHDD 91
           +  SR T  SRYSSSRGSNN+      +LPAG   + R ++              D    
Sbjct: 77  QEASRLTL-SRYSSSRGSNNSFLAADKKLPAGGGHRGRQVLSGRSGGGVDDEEEDDSEGA 135

Query: 92  DGDGWYY---GSSHKCLLICFRIIWKLLLSLGIVLLVYYMASKPPPPKISIKMAGVHQFG 148
               W Y        C  I F++ W++ +S+   LLV+++A+KP  P ++ K+  + QF 
Sbjct: 136 RSGAWRYVKLDPDAPCCCIVFQVAWRVAVSVAFALLVFFVATKPRDPGVTFKVGKIQQFS 195

Query: 149 IGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRKLYA 208
           +GEG+DG+GV T  L+CN ++ + +DN S++F LH+ PP ++MSFGRF FA+S G +   
Sbjct: 196 LGEGLDGSGVITSFLSCNLTVAMAVDNHSRVFTLHVRPPRLDMSFGRFTFATSQGVEEEG 255

Query: 209 ASH-----GSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLIIRMSFRSNYRVVGDLI 263
           +S+     G    +L      +PMY AGR MQDLL S  GLPL + +  RS YR+VG L+
Sbjct: 256 SSYDVGARGKRTVRLFVAAEGKPMYAAGRGMQDLLESGGGLPLAVTVRARSRYRMVGSLV 315

Query: 264 KSNFLHRSECFLFLHRNYDKRHATQVYNSTCAV 296
           + ++ H ++C + L R   + +A      TC+ 
Sbjct: 316 RLSYRHDAQCVVRLRRTPRRNNAIDASGYTCSA 348

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115451567|ref|NP_001049384.1| Os03g0216500 [Oryza sativa Japonica Group] gi|108706852|gb|ABF94647.1| expressed protein [Oryza sativa Japonica Group] gi|113547855|dbj|BAF11298.1| Os03g0216500 [Oryza sativa Japonica Group] gi|125585404|gb|EAZ26068.1| hypothetical protein OsJ_09921 [Oryza sativa Japonica Group]

 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/333 (34%), Positives = 172/333 (51%), Gaps = 43/333 (12%)

Query: 5   YPVVCGYYVKRPSTNSHANTTINDHESSAI--------HFRSPCCSET------------ 44
           +P  C YYV+ PS  SH   +    ES+AI         F +P  S              
Sbjct: 18  HPSPCAYYVQSPSAASH-TLSHPASESTAIILSPFPDAAFAAPRHSRVVDDATAHDNDVD 76

Query: 45  EVLSRFTTPSRYSSSRGSNNNNSFLHDELPAGEAPQNRLII-------------VDPHDD 91
           +  SR T  SRYSSSRGSNN+      +LPAG   + R ++              D    
Sbjct: 77  QEASRLTL-SRYSSSRGSNNSFLAADKKLPAGGGHRGRQVLSGRSGGGVDEEEEDDSEGA 135

Query: 92  DGDGWYY---GSSHKCLLICFRIIWKLLLSLGIVLLVYYMASKPPPPKISIKMAGVHQFG 148
               W Y        C  I F++ W++ +S+   LLV+++A+KP  P ++ K+  + QF 
Sbjct: 136 RSGAWRYVKLDPDAPCCCIVFQVAWRVAVSVAFALLVFFVATKPRDPGVTFKVGKIQQFS 195

Query: 149 IGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRKLYA 208
           +GEG+DG+GV T  L+CN ++ + +DN S++F LH+ PP ++MSFGRF FA+S G +   
Sbjct: 196 LGEGLDGSGVITSFLSCNLTVAMAVDNHSRVFTLHVRPPRLDMSFGRFTFATSQGVEEEG 255

Query: 209 ASH-----GSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLIIRMSFRSNYRVVGDLI 263
           +S+     G    +L      +PMY AGR MQDLL S  GLPL + +  RS YR+VG L+
Sbjct: 256 SSYDVGARGKRTVRLFVAAEGKPMYAAGRGMQDLLESGGGLPLAVTVRARSRYRMVGSLV 315

Query: 264 KSNFLHRSECFLFLHRNYDKRHATQVYNSTCAV 296
           + ++ H ++C + L R   + +A      TC+ 
Sbjct: 316 RLSYRHDAQCVVRLRRTPRRNNAIDASGYTCSA 348

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	298
TAIR|locus:2103454	271	AT3G08490 "AT3G08490" [Arabido	0.667	0.734	0.435	5.8e-40
TAIR|locus:2825837	342	AT1G45688 "AT1G45688" [Arabido	0.288	0.251	0.255	1.3e-07
TAIR|locus:2160026	320	AT5G42860 "AT5G42860" [Arabido	0.298	0.278	0.235	1.7e-06

TAIR|locus:2103454 AT3G08490 "AT3G08490" [Arabidopsis thaliana (taxid:3702)]

 Score = 406 (148.0 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
 Identities = 87/200 (43%), Positives = 111/200 (55%)

Query:    99 GSSHKCLLICFRIIWKXXXXXXXXXXVYYMAXXXXXXXXXXXMAGVHQFGIGEGVDGTGV 158
             G+S+    I  ++ W+          V+Y+A           +   +QF + EGVD  GV
Sbjct:    73 GTSNSSWWIVLQVGWRFLFSLGVALLVFYIATQPPHPNISFRIGRFNQFMLEEGVDSHGV 132

Query:   159 ATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRKLYAASHGSSLFQL 218
             +TK LT NCS  LIIDNKS +FGLHIHPP I+  FG   FA + G KLY  SH S+ FQL
Sbjct:   133 STKFLTFNCSTKLIIDNKSNVFGLHIHPPSIKFFFGPLNFAKAQGPKLYGLSHESTTFQL 192

Query:   219 SFGTRNRPMYGAGRNMQDLLASRKGLPLIIRMSFRSNYRVVGDLIKSNFLHRSECFLFLH 278
                T NR MYGAG  M D+L SR GLPLI+R S  S+YRVV ++I   + H+ EC L L 
Sbjct:   193 YIATTNRAMYGAGTEMNDMLLSRAGLPLILRTSIISDYRVVWNIINPKYHHKVECLLLLA 252

Query:   279 RNYDKRHATQVYNSTCAVTS 298
                   H T +    C + S
Sbjct:   253 DKERHSHVTMI-REKCRLVS 271

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2825837 AT1G45688 "AT1G45688" [Arabidopsis thaliana (taxid:3702)]

 Score = 101 (40.6 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
 Identities = 22/86 (25%), Positives = 37/86 (43%)

Query:   149 IGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRKLYA 208
             I  G D  GV T  +T N ++ ++  N    FG+H+    I++SF +    S   +K Y 
Sbjct:   172 IQAGQDAGGVGTDMITMNATLRMLYRNTGTFFGVHVTSTPIDLSFSQIKIGSGSVKKFYQ 231

Query:   209 ASHGSSLFQLSFGTRNRPMYGAGRNM 234
                      +       P+YG+G  +
Sbjct:   232 GRKSERTVLVHVIGEKIPLYGSGSTL 257

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2160026 AT5G42860 "AT5G42860" [Arabidopsis thaliana (taxid:3702)]

 Score = 102 (41.0 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
 Identities = 21/89 (23%), Positives = 40/89 (44%)

Query:   146 QFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRK 205
             Q  +  G D  G+ T  +T N ++ ++  N    FG+H+    I++SF +    S   +K
Sbjct:   148 QLKVQAGQDAGGIGTDMITMNATLRMLYRNTGTFFGVHVTSSPIDLSFSQITIGSGSIKK 207

Query:   206 LYAASHGSSLFQLSFGTRNRPMYGAGRNM 234
              Y +        ++      P+YG+G  +
Sbjct:   208 FYQSRKSQRTVVVNVLGDKIPLYGSGSTL 236

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.I.1816.1 hypothetical protein (270 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	298
PLN03160	219	uncharacterized protein; Provisional	99.98
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.39
smart00769	100	WHy Water Stress and Hypersensitive response.	97.74
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	96.66
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	95.48
COG5608	161	LEA14-like dessication related protein [Defense me	91.82
PLN03160	219	uncharacterized protein; Provisional	90.21
TIGR02588	122	conserved hypothetical protein TIGR02588. The func	83.17

>PLN03160 uncharacterized protein; Provisional

Probab=99.98  E-value=2.3e-30  Score=235.14  Aligned_cols=170  Identities=9%  Similarity=0.124  Sum_probs=137.3

Q ss_pred             HHHHHHHHheeeEEeecCCCceEEEEEeEEEEEeecCCCCCCccccceeEEEeEEEEEEecCCCeEEEEEeCCEEEEEEC
Q 022378          115 LLLSLGIVLLVYYMASKPPPPKISIKMAGVHQFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFG  194 (298)
Q Consensus       115 lll~~gi~~LV~wLv~RP~~P~fsV~sa~v~~Fnl~~g~d~sGvpt~~Lt~n~tv~l~a~NPNk~~GI~Y~~~~~~v~Y~  194 (298)
                      +++++++++.++|+++|||.|+|+|++++|++|++..+.    .+...++++++++++++|||+ +||+|++.++.++|+
T Consensus        47 ~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~----~~~~~~n~tl~~~v~v~NPN~-~~~~Y~~~~~~v~Y~  121 (219)
T PLN03160         47 LLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNT----TLRPGTNITLIADVSVKNPNV-ASFKYSNTTTTIYYG  121 (219)
T ss_pred             HHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCC----CCceeEEEEEEEEEEEECCCc-eeEEEcCeEEEEEEC
Confidence            333477788889999999999999999999999996521    123356666778899999999 899999999999999


Q ss_pred             ceeeccCCCCCceecCCCeeEEEEEEEeeeeecccccchhhhhhhcCccEeEEEEEEEEEEEEEEeeEEeeeeeEEEEEE
Q 022378          195 RFPFASSHGRKLYAASHGSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLIIRMSFRSNYRVVGDLIKSNFLHRSECF  274 (298)
Q Consensus       195 ~~~la~~~lp~FyQ~~kntt~v~~~l~g~~vpL~gag~~L~~~~~~~g~VpL~l~v~~rvR~kVvG~l~~~k~~~~V~C~  274 (298)
                      |+.+|.+.+|+|||++|+|+.+.+.+.....-+.. +..|..+.. +|.+||++++++++|+++ |++++++++.+|+|+
T Consensus       122 g~~vG~a~~p~g~~~ar~T~~l~~tv~~~~~~~~~-~~~L~~D~~-~G~v~l~~~~~v~gkVkv-~~i~k~~v~~~v~C~  198 (219)
T PLN03160        122 GTVVGEARTPPGKAKARRTMRMNVTVDIIPDKILS-VPGLLTDIS-SGLLNMNSYTRIGGKVKI-LKIIKKHVVVKMNCT  198 (219)
T ss_pred             CEEEEEEEcCCcccCCCCeEEEEEEEEEEeceecc-chhHHHHhh-CCeEEEEEEEEEEEEEEE-EEEEEEEEEEEEEeE
Confidence            99999999999999999999888876533221211 345655555 789999999999999995 678899999999999


Q ss_pred             EEEecCCCccccccccCCCeeec
Q 022378          275 LFLHRNYDKRHATQVYNSTCAVT  297 (298)
Q Consensus       275 l~v~~~~~~~~~~~~~~~sC~~~  297 (298)
                      +.|+....     .+++..|+++
T Consensus       199 v~V~~~~~-----~i~~~~C~~~  216 (219)
T PLN03160        199 MTVNITSQ-----AIQGQKCKRH  216 (219)
T ss_pred             EEEECCCC-----EEeccEeccc
Confidence            99986432     3567789875

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.39  E-value=9.6e-13  Score=103.02  Aligned_cols=99  Identities=15%  Similarity=0.265  Sum_probs=74.1

Q ss_pred             EEEEecCCCeEEEEEeCCEEEEEECceeec-cCCCCCceecCCCeeEEEEEEEeeeeecccccchhhhhhhcCccEeEEE
Q 022378          170 DLIIDNKSKLFGLHIHPPIIEMSFGRFPFA-SSHGRKLYAASHGSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLII  248 (298)
Q Consensus       170 ~l~a~NPNk~~GI~Y~~~~~~v~Y~~~~la-~~~lp~FyQ~~kntt~v~~~l~g~~vpL~gag~~L~~~~~~~g~VpL~l  248 (298)
                      +|.++|||. ++|+|++.++.++|+|..+| ....++|+|++++++++.+.+..+...+   ...+.++.  .+..++++
T Consensus         1 ~l~v~NPN~-~~i~~~~~~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~~~~~~l---~~~l~~~~--~~~~~~~v   74 (101)
T PF03168_consen    1 TLSVRNPNS-FGIRYDSIEYDVYYNGQRVGTGGSLPPFTIPARSSTTVPVPVSVDYSDL---PRLLKDLL--AGRVPFDV   74 (101)
T ss_dssp             EEEEEESSS-S-EEEEEEEEEEEESSSEEEEEEECE-EEESSSCEEEEEEEEEEEHHHH---HHHHHHHH--HTTSCEEE
T ss_pred             CEEEECCCc-eeEEEeCEEEEEEECCEEEECccccCCeEECCCCcEEEEEEEEEcHHHH---HHHHHhhh--ccccceEE
Confidence            478899999 99999999999999999999 7789999999999999999887776555   44444444  34677888


Q ss_pred             EEEEEEEEEEEeeEEeeeeeEEEEEE
Q 022378          249 RMSFRSNYRVVGDLIKSNFLHRSECF  274 (298)
Q Consensus       249 ~v~~rvR~kVvG~l~~~k~~~~V~C~  274 (298)
                      .++++++++|++.....+++..++|.
T Consensus        75 ~~~~~g~~~v~~~~~~~~~~v~~~~~  100 (101)
T PF03168_consen   75 TYRIRGTFKVLGTPIFGSVRVPVSCE  100 (101)
T ss_dssp             EEEEEEEEE-EE-TTTSCEEEEEEEE
T ss_pred             EEEEEEEEEEcccceeeeEEEeEEeE
Confidence            88888888865444444555555553

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=97.74  E-value=0.0003  Score=56.15  Aligned_cols=86  Identities=9%  Similarity=0.147  Sum_probs=64.1

Q ss_pred             eeEEEeEEEEEEecCCCeEEEEEeCCEEEEEECceeeccCCCC-CceecCCCeeEEEEEEEeeeeecccccchhhhhhhc
Q 022378          162 TLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGR-KLYAASHGSSLFQLSFGTRNRPMYGAGRNMQDLLAS  240 (298)
Q Consensus       162 ~Lt~n~tv~l~a~NPNk~~GI~Y~~~~~~v~Y~~~~la~~~lp-~FyQ~~kntt~v~~~l~g~~vpL~gag~~L~~~~~~  240 (298)
                      .+...+.+++.+.|||. +.+.|+..+..++|+|..+|.+..+ ....++++++.+.+.+.-..   ......+. ++.+
T Consensus        12 ~~~~~~~l~l~v~NPN~-~~l~~~~~~y~l~~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~~~~---~~~~~~~~-~l~~   86 (100)
T smart00769       12 GLEIEIVLKVKVQNPNP-FPIPVNGLSYDLYLNGVELGSGEIPDSGTLPGNGRTVLDVPVTVNL---FLAEALIW-HIAN   86 (100)
T ss_pred             ceEEEEEEEEEEECCCC-CccccccEEEEEEECCEEEEEEEcCCCcEECCCCcEEEEEEEEeeh---hHhHHHHH-hhcc
Confidence            35567778899999997 6999999999999999999999986 68899999998888876632   11223333 2333


Q ss_pred             CccEeEEEEEEE
Q 022378          241 RKGLPLIIRMSF  252 (298)
Q Consensus       241 ~g~VpL~l~v~~  252 (298)
                      +..++.++++++
T Consensus        87 ~~~~~y~l~g~l   98 (100)
T smart00769       87 GEEIPYRLDGKL   98 (100)
T ss_pred             CCCccEEEEEEE
Confidence            456777766654

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=96.66  E-value=0.026  Score=52.42  Aligned_cols=113  Identities=14%  Similarity=0.269  Sum_probs=69.8

Q ss_pred             ccccCccchhhHHHHHHHHHHHHHHHheeeEEeecCCCceEEEEEeEEEEEeecCCCCCCccccceeEEEeEEEEEEecC
Q 022378           97 YYGSSHKCLLICFRIIWKLLLSLGIVLLVYYMASKPPPPKISIKMAGVHQFGIGEGVDGTGVATKTLTCNCSIDLIIDNK  176 (298)
Q Consensus        97 ~~~~~~rc~~~~~~v~~~lll~~gi~~LV~wLv~RP~~P~fsV~sa~v~~Fnl~~g~d~sGvpt~~Lt~n~tv~l~a~NP  176 (298)
                      |..+.|-+++..+.+ ++.|++.|+  +||+|+  ||.  +.|..+.+....+.-..+     .+.+.+|++-.+.+.||
T Consensus        68 RLKPrRTklyV~~sV-~~CLl~~~L--~iFFLf--PRs--V~v~~~gv~s~~V~f~~~-----~~~v~l~itn~lNIsN~  135 (238)
T PF07092_consen   68 RLKPRRTKLYVFLSV-LLCLLLSGL--VIFFLF--PRS--VTVSPVGVKSVTVSFNPD-----KSTVQLNITNTLNISNP  135 (238)
T ss_pred             ccCCceeEEEeeHHH-HHHHHHHHh--eEEEEe--CcE--EEEecCcEEEEEEEEeCC-----CCEEEEEEEEEEEccCC
Confidence            666676676654444 233322333  344444  443  444444444444322111     12577888888999999


Q ss_pred             CCeEEEEEeCCEEEEEECceeeccCCCCCc-eecCCCeeEEEEEEEe
Q 022378          177 SKLFGLHIHPPIIEMSFGRFPFASSHGRKL-YAASHGSSLFQLSFGT  222 (298)
Q Consensus       177 Nk~~GI~Y~~~~~~v~Y~~~~la~~~lp~F-yQ~~kntt~v~~~l~g  222 (298)
                      | ++-|......+++.|....+|.+..... .-++++.+.+...+..
T Consensus       136 N-Fy~V~Vt~~s~qv~~~~~VVG~~~~~~~~~I~Prs~~q~~~tV~t  181 (238)
T PF07092_consen  136 N-FYPVTVTNLSIQVLYMKTVVGKGKNSNITVIGPRSSKQVNYTVKT  181 (238)
T ss_pred             C-EEEEEEEeEEEEEEEEEeEEeeeEecceEEecccCCceEEEEeeE
Confidence            9 5789999999999999999998876544 4466666655555443

The function of this family is unknown.

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=95.48  E-value=0.099  Score=51.64  Aligned_cols=31  Identities=13%  Similarity=0.046  Sum_probs=24.3

Q ss_pred             eeEEEeEEEEEEecCCCeEEEEEeCCEEEEEECc
Q 022378          162 TLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGR  195 (298)
Q Consensus       162 ~Lt~n~tv~l~a~NPNk~~GI~Y~~~~~~v~Y~~  195 (298)
                      -|-+++  ++.+.|||- |.|..+..++.+|=.-
T Consensus       347 ELmfdl--~V~A~NPn~-~~V~I~d~dldIFAKS  377 (387)
T PF12751_consen  347 ELMFDL--TVEAFNPNW-FTVTIDDMDLDIFAKS  377 (387)
T ss_pred             eEEEee--EEEEECCCe-EEEEeccceeeeEecC
Confidence            455555  788999995 7999999999987543

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=91.82  E-value=8.5  Score=33.82  Aligned_cols=59  Identities=8%  Similarity=0.056  Sum_probs=49.0

Q ss_pred             EEeEEEEEEecCCCeEEEEEeCCEEEEEECceeeccCCC-CCceecCCCeeEEEEEEEeee
Q 022378          165 CNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHG-RKLYAASHGSSLFQLSFGTRN  224 (298)
Q Consensus       165 ~n~tv~l~a~NPNk~~GI~Y~~~~~~v~Y~~~~la~~~l-p~FyQ~~kntt~v~~~l~g~~  224 (298)
                      ..+-.++.++|||. |-|-.......++-+|..+|.|.. ..+..++++..++.+.+.-+.
T Consensus        50 ~EiV~t~KiyNPN~-fPipVtgl~y~vymN~Iki~eG~~~k~~~v~p~S~~tvdv~l~~d~  109 (161)
T COG5608          50 TEIVGTLKIYNPNP-FPIPVTGLQYAVYMNDIKIGEGEILKGTTVPPNSRETVDVPLRLDN  109 (161)
T ss_pred             eEEEEEEEecCCCC-cceeeeceEEEEEEcceEeeccccccceEECCCCeEEEEEEEEEeh
Confidence            35566788899997 688888888899999999999975 458889999999998877654

>PLN03160 uncharacterized protein; Provisional

Probab=90.21  E-value=15  Score=33.67  Aligned_cols=85  Identities=9%  Similarity=0.142  Sum_probs=50.4

Q ss_pred             HHHHHHHHHHheeeEEeecC--CCceEEEEEeEEEE-------EeecCCCCCCccccceeEEEeE------EEEEEecCC
Q 022378          113 WKLLLSLGIVLLVYYMASKP--PPPKISIKMAGVHQ-------FGIGEGVDGTGVATKTLTCNCS------IDLIIDNKS  177 (298)
Q Consensus       113 ~~lll~~gi~~LV~wLv~RP--~~P~fsV~sa~v~~-------Fnl~~g~d~sGvpt~~Lt~n~t------v~l~a~NPN  177 (298)
                      ++++++++++++.++=.=+|  +--.++|+.+.+..       +|+            +|+++++      +.+.++|  
T Consensus        48 l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~------------tl~~~v~v~NPN~~~~~Y~~--  113 (219)
T PLN03160         48 LILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNI------------TLIADVSVKNPNVASFKYSN--  113 (219)
T ss_pred             HHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEE------------EEEEEEEEECCCceeEEEcC--
Confidence            45555566666655555677  45667777776642       222            2222222      2355543  


Q ss_pred             CeEEEEEeCCEEEEEECceeeccCCCCCceecCCCeeE
Q 022378          178 KLFGLHIHPPIIEMSFGRFPFASSHGRKLYAASHGSSL  215 (298)
Q Consensus       178 k~~GI~Y~~~~~~v~Y~~~~la~~~lp~FyQ~~kntt~  215 (298)
                      -...++|+...+    +...+..+..+++.+.+.+.+.
T Consensus       114 ~~~~v~Y~g~~v----G~a~~p~g~~~ar~T~~l~~tv  147 (219)
T PLN03160        114 TTTTIYYGGTVV----GEARTPPGKAKARRTMRMNVTV  147 (219)
T ss_pred             eEEEEEECCEEE----EEEEcCCcccCCCCeEEEEEEE
Confidence            346789988544    4566777788888888888774

>TIGR02588 conserved hypothetical protein TIGR02588

Probab=83.17  E-value=2.4  Score=35.77  Aligned_cols=28  Identities=18%  Similarity=0.222  Sum_probs=20.5

Q ss_pred             HHHHheeeE--EeecCCCceEEEEEeEEEE
Q 022378          119 LGIVLLVYY--MASKPPPPKISIKMAGVHQ  146 (298)
Q Consensus       119 ~gi~~LV~w--Lv~RP~~P~fsV~sa~v~~  146 (298)
                      ++++.+|+|  +.-++++|.+.+.......
T Consensus        16 l~viglv~y~~l~~~~~pp~l~v~~~~~~r   45 (122)
T TIGR02588        16 AAMFGLVAYDWLRYSNKAAVLEVAPAEVER   45 (122)
T ss_pred             HHHHHHHHHHhhccCCCCCeEEEeehheeE
Confidence            566666665  7778899999887766554

The function of this protein is unknown. It is always found as part of a two-gene operon with TIGR02587, a protein that appears to span the membrane seven times. It is found in Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Sinorhizobium meliloti, and Gloeobacter violaceus, so far, all of which are bacterial.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	298
1yyc_A	174	LEA protein, putative late embryogenesis abundant	97.67
1xo8_A	151	AT1G01470; structural genomics, protein structure	97.25
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	96.63

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=97.67  E-value=8.2e-05  Score=64.66  Aligned_cols=105  Identities=8%  Similarity=0.060  Sum_probs=78.2

Q ss_pred             CCceEEEEEeEEEEEeecCCCCCCccccceeEEEeEEEEEEecCCCeEEEEEeCCEEEEEECceeeccCCCCC-ceecCC
Q 022378          133 PPPKISIKMAGVHQFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRK-LYAASH  211 (298)
Q Consensus       133 ~~P~fsV~sa~v~~Fnl~~g~d~sGvpt~~Lt~n~tv~l~a~NPNk~~GI~Y~~~~~~v~Y~~~~la~~~lp~-FyQ~~k  211 (298)
                      ++|++++.++.+..+++..             ..+.+.+.++|||. +.|-+..++..+.-+|..||+|..+. +-.+++
T Consensus        43 ~~PeV~v~~v~~~~~~l~~-------------~~~~l~LrV~NPN~-~pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~  108 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRDG-------------VDYHAKVSVKNPYS-QSIPICQISYILKSATRTIASGTIPDPGSLVGS  108 (174)
T ss_dssp             CCCEEEEEEEEEEEECSSS-------------EEEEEEEEEEECSS-SCCBCCSEEEEEEESSSCEEEEEESCCCBCCSS
T ss_pred             CCCEEEEEEeEEeccccce-------------EEEEEEEEEECCCC-CCccccceEEEEEECCEEEEEEecCCCceECCC
Confidence            7899999999999877642             34556788899998 58999999999999999999998876 667899


Q ss_pred             CeeEEEEEEEeeeeecccccchhhhhhhcCccEeEEEEEEEEEE
Q 022378          212 GSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLIIRMSFRSN  255 (298)
Q Consensus       212 ntt~v~~~l~g~~vpL~gag~~L~~~~~~~g~VpL~l~v~~rvR  255 (298)
                      +++++.+.+...-..+   ...+. ++.....++-++++.+.+.
T Consensus       109 g~~~v~Vpv~v~~~~l---~~~~~-~l~~~~~i~Y~L~g~L~id  148 (174)
T 1yyc_A          109 GTTVLDVPVKVAYSIA---VSLMK-DMCTDWDIDYQLDIGLTFD  148 (174)
T ss_dssp             EEEEEEEEEEESHHHH---HHTCC-CCCSSEEECEEEEEEEEEE
T ss_pred             CcEEEEEEEEEEHHHH---HHHHH-hcCCCCccceEEEEEEEec
Confidence            9999988876642111   11222 2233457888887766544

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=97.25  E-value=7.9e-05  Score=63.09  Aligned_cols=105  Identities=5%  Similarity=0.005  Sum_probs=75.9

Q ss_pred             CCceEEEEEeEEEEEeecCCCCCCccccceeEEEeEEEEEEecCCCeEEEEEeCCEEEEEECceeeccCCCCC-ceecCC
Q 022378          133 PPPKISIKMAGVHQFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRK-LYAASH  211 (298)
Q Consensus       133 ~~P~fsV~sa~v~~Fnl~~g~d~sGvpt~~Lt~n~tv~l~a~NPNk~~GI~Y~~~~~~v~Y~~~~la~~~lp~-FyQ~~k  211 (298)
                      ++|++++.++.+..+++.             ...+.+.+.++|||. +.|.+...+..+.=+|..+|+|..+. .-.+++
T Consensus        20 ~~P~v~v~~v~~~~~~~~-------------~~~~~~~l~V~NPN~-~~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~   85 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNRD-------------SVEYLAKVSVTNPYS-HSIPICEISFTFHSAGREIGKGKIPDPGSLKAK   85 (151)
T ss_dssp             CSCCCBCSEEEECCCTTT-------------EECEEEEEEEECSSS-SCCCCEEEEEEEESSSSCEEEEEEEECCCCSSS
T ss_pred             CCCEEEEEEeEEeccCcc-------------eeEEEEEEEEECCCC-CCcccccEEEEEEECCEEEEEEecCCCcEECCC
Confidence            789999999988866543             234666888999998 58888888888888999999998875 667899


Q ss_pred             CeeEEEEEEEeeeeecccccchhhhhhhcCccEeEEEEEEEEEE
Q 022378          212 GSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLIIRMSFRSN  255 (298)
Q Consensus       212 ntt~v~~~l~g~~vpL~gag~~L~~~~~~~g~VpL~l~v~~rvR  255 (298)
                      +++++.+.+...-..+   -..+. ++.....++-++++++.+.
T Consensus        86 g~~~v~vpv~v~~~~l---~~~~~-~l~~~~~i~Y~l~g~l~i~  125 (151)
T 1xo8_A           86 DMTALDIPVVVPYSIL---FNLAR-DVGVDWDIDYELQIGLTID  125 (151)
T ss_dssp             SEEEEEECCCEEHHHH---HHHHH-HHHHHSEEEEEEEEEEEEC
T ss_pred             CcEEEEEEEEEEHHHH---HHHHH-hcccCCcccEEEEEEEEEc
Confidence            9998888865542111   11222 2333467888887777544

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=96.63  E-value=0.012  Score=48.94  Aligned_cols=87  Identities=6%  Similarity=0.003  Sum_probs=62.2

Q ss_pred             EEEeEEEEEEecCCCeEEEEEeCCEEEEEECceeeccCC-CCCceecCCCeeEEEEEEEeeeeecccccchhhhhhhcCc
Q 022378          164 TCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSH-GRKLYAASHGSSLFQLSFGTRNRPMYGAGRNMQDLLASRK  242 (298)
Q Consensus       164 t~n~tv~l~a~NPNk~~GI~Y~~~~~~v~Y~~~~la~~~-lp~FyQ~~kntt~v~~~l~g~~vpL~gag~~L~~~~~~~g  242 (298)
                      ...+.+.+.+.|||. +.+.++..+..+..+|+.+|+|. ...+--++.+++++.+.+..+.-.+.   ..+.+.++++.
T Consensus        17 ~t~~~~~l~V~NPN~-~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~---~~~~~hi~nge   92 (136)
T 3but_A           17 QTEIVALAKVRNEDV-VPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLR---EWWVTHIANGE   92 (136)
T ss_dssp             EEEEEEEEEEECCSS-SCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHT---THHHHHHHTTS
T ss_pred             EEEEEEEEEEeCCCC-cceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhH---HHHHHHhhcCC
Confidence            356777899999997 59999999999999999999986 55688899999999998877653332   22333344332


Q ss_pred             cEeEEEEEEEEE
Q 022378          243 GLPLIIRMSFRS  254 (298)
Q Consensus       243 ~VpL~l~v~~rv  254 (298)
                      .-.|++++++.+
T Consensus        93 ~s~l~i~~~~~l  104 (136)
T 3but_A           93 KTKIRVAIKPTI  104 (136)
T ss_dssp             EEEEEEEEEEEE
T ss_pred             ceEEEEEEEEEE
Confidence            444555555443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	298
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	97.74

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.74  E-value=1.8e-06  Score=71.36  Aligned_cols=113  Identities=8%  Similarity=0.052  Sum_probs=81.2

Q ss_pred             ecCCCceEEEEEeEEEEEeecCCCCCCccccceeEEEeEEEEEEecCCCeEEEEEeCCEEEEEECceeeccCCCCC-cee
Q 022378          130 SKPPPPKISIKMAGVHQFGIGEGVDGTGVATKTLTCNCSIDLIIDNKSKLFGLHIHPPIIEMSFGRFPFASSHGRK-LYA  208 (298)
Q Consensus       130 ~RP~~P~fsV~sa~v~~Fnl~~g~d~sGvpt~~Lt~n~tv~l~a~NPNk~~GI~Y~~~~~~v~Y~~~~la~~~lp~-FyQ  208 (298)
                      -+=++|++++.++.+.++.+.             ...+.+.+.++|||. ++|.++..+..++.+|..+++|..+. +-.
T Consensus        17 ~~~~kPev~l~~v~i~~v~~~-------------~~~l~~~l~V~NPN~-~~l~i~~l~y~l~~~g~~ia~G~~~~~~~i   82 (151)
T d1xo8a_          17 TAIPKPEGSVTDVDLKDVNRD-------------SVEYLAKVSVTNPYS-HSIPICEISFTFHSAGREIGKGKIPDPGSL   82 (151)
T ss_dssp             CCCCSCCCBCSEEEECCCTTT-------------EECEEEEEEEECSSS-SCCCCEEEEEEEESSSSCEEEEEEEECCCC
T ss_pred             cCCCCCeEEEEEEEeeecccc-------------eEEEEEEEEEECCCC-CceeeeeEEEEEEECCEEEEeEecCCCcEE
Confidence            355789999999999876553             245666888999998 58999999999999999999998775 666


Q ss_pred             cCCCeeEEEEEEEeeeeecccccchhhhhhhcCccEeEEEEEEEEEEEEEEe
Q 022378          209 ASHGSSLFQLSFGTRNRPMYGAGRNMQDLLASRKGLPLIIRMSFRSNYRVVG  260 (298)
Q Consensus       209 ~~kntt~v~~~l~g~~vpL~gag~~L~~~~~~~g~VpL~l~v~~rvR~kVvG  260 (298)
                      ++++++.+.+.+...-..+   .+.+.+..+ .+.++.++++.+.+..-++|
T Consensus        83 pa~~~~~v~vpv~v~~~~l---~~~~~~i~~-~~~i~Y~l~g~l~~d~pv~G  130 (151)
T d1xo8a_          83 KAKDMTALDIPVVVPYSIL---FNLARDVGV-DWDIDYELQIGLTIDLPVVG  130 (151)
T ss_dssp             SSSSEEEEEECCCEEHHHH---HHHHHHHHH-HSEEEEEEEEEEEECCTTTS
T ss_pred             cCCCcEEEEEEEEEEHHHH---HHHHHhhcc-CCCccEEEEEEEEEecCccC
Confidence            8899999988876532222   333333222 45688777777665533345