Citrus Sinensis ID: 022539

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-----
Protein Sequence
MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGTPSYHHPHDTKPCATRNNNNNNHRAGGAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGGVYV
Secondary Structure (PSIPRED)
cccccHHHccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcHHHHccccEEEEEEEEEEEcccccEEEEEEEEEEEEccccccccEEEcccccccccccccccEEEEEEEccccccEEEcccEEEEEEccHHHHccccEEEEEcccccEEEEccccccccccEEEEccccccccccccccccEEEEEEEEccccccHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHcHHcccccccccccccccccccccccccccccccccccccccccccccEEcEEEEHHHHHcccEEEEEEEEEccccccccEEEEEEEEEEcccccccccEEEEccccccccccccccEEEEEEEcccccEEEccccEEEEEEEcHHHHHcccEEEEEcccccEEEEEccccccccEEEEEccccccccccccccccEEEEEEEEccccccHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
MGVDYYNILkvsrgateDDLKKSYKRLAMkwhpdknpatnQQAEAKFKLISEAYDvlsdprkrqiydlygpeglkasdfgtpsyhhphdtkpcatrnnnnnnhraggagpkptptpieTQLLCTLEELYKGARKKMKisrvlpdhfgkpitvQEILKIdikpgwkkgtkitfpekgnqepglppadlifvveekphavfqrdgndlVVNHKISLLEALTGlslnltaldgrnltlpvtdiiqpgsevvipnegmpiskdpskkgnliikfdimfpsrltAEQKSDLKRALGGVYV
Flexible Loop (DISEMBL)
MGVDYYNIlkvsrgateddLKKSYKRLAMkwhpdknpatnQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGTPSYHHPHDTKPCATRNNNNNNHraggagpkptptPIETQLLCTLEELYKGARKKMKisrvlpdhfgkpitvqeilkidikpgwkKGTKITfpekgnqepglPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIiqpgsevvipnegmpiskdpskkGNLIIKFDIMfpsrltaeqksdlkralggvyv
Low Complexity Region (SEG)
MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGTPSYHHPHDTKPCATRnnnnnnHRaggagpkptptpIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGGVYV
Disordered region (IsUnstruct)
****YYNILKV***********************************FKLISEAYDVLSDPRKRQIYDLYG************************************************TQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITF***********PADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVI***************NLIIKFDIMFPS*******************
Disordered Region (DISOPRED)
MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGT***HHP**********************************LCTLEELYKGARKKMK****************EILKIDIKPGWKKGTKITF**********PPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGGVYV
Disordered Region (DISEMBL)
MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGTPSYHHPHDTKPCATRNNNNNNHRAGGAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGGVYV
Disordered Region (DISPRO)
**VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGTPSYHHPHDTKPCATRNNNNNNHRA*******TPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGGVYV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGTPSYHHPHDTKPCATRNNNNNNHRAGGAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGGVYV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	295	2.2.26 [Sep-21-2011]
Q9D832	337	DnaJ homolog subfamily B	yes	no	0.972	0.851	0.409	6e-61
Q3MI00	340	DnaJ homolog subfamily B	yes	no	0.969	0.841	0.400	1e-60
Q9QYJ3	340	DnaJ homolog subfamily B	no	no	0.955	0.829	0.390	1e-59
Q5R8J8	337	DnaJ homolog subfamily B	yes	no	0.972	0.851	0.388	5e-59
Q9UDY4	337	DnaJ homolog subfamily B	yes	no	0.972	0.851	0.388	6e-59
O89114	348	DnaJ homolog subfamily B	no	no	0.976	0.827	0.389	1e-58
O75953	348	DnaJ homolog subfamily B	no	no	0.976	0.827	0.389	1e-58
P25685	340	DnaJ homolog subfamily B	no	no	0.959	0.832	0.385	4e-58
Q2KIT4	337	DnaJ homolog subfamily B	no	no	0.972	0.851	0.376	3e-57
P59910	316	DnaJ homolog subfamily B	no	no	0.972	0.908	0.403	3e-56

>sp|Q9D832|DNJB4_MOUSE DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1

 Score =  234 bits (596), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 138/337 (40%), Positives = 198/337 (58%), Gaps = 50/337 (14%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           MG DYY+IL + +GAT++D+KK+Y++ A+K+HPDKN +   QAE KFK ++EAY+VLSDP
Sbjct: 1   MGKDYYHILGIDKGATDEDVKKAYRKQALKFHPDKNKSP--QAEEKFKEVAEAYEVLSDP 58

Query: 61  RKRQIYDLYGPEGLKASD---------FGTPSYHHPHDTKPCATRNNN----NNNHRAGG 107
           +KR+IYD +G EGLK            F    +  PH T       +N        R GG
Sbjct: 59  KKREIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHATFAAFFGGSNPFEIFFGRRMGG 118

Query: 108 A------------------------------GP---KPTPTPIETQLLCTLEELYKGARK 134
                                          GP   K  P PI  +L  +LEE+Y G  K
Sbjct: 119 GRDSEEMEIDGDPFSAFGFSMNGYPRDRNSVGPSRLKQDP-PIIHELKVSLEEIYSGCTK 177

Query: 135 KMKISRVLPDHFGKPITVQE-ILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEE 193
           +MKISR   +  G+    ++ IL I+IK GWK+GTKITFP +G++ P   PAD++FV+++
Sbjct: 178 RMKISRKRLNPDGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADIVFVIKD 237

Query: 194 KPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEG 253
           K H  F+RDG+++V   KISL EAL G SLN+  +DGRNL + VTDI++PG    +   G
Sbjct: 238 KEHPKFKRDGSNIVYTAKISLREALCGCSLNVPTMDGRNLPMSVTDIVKPGMRRRVIGYG 297

Query: 254 MPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRAL 290
           +P  K+P ++G+L+I+FD+ FP  ++A  K  L++ L
Sbjct: 298 LPFPKNPDQRGDLLIEFDVSFPDVISAASKEILRKHL 334

Probable chaperone.
Mus musculus (taxid: 10090)

>sp|Q3MI00|DNJB1_BOVIN DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3

 Score =  233 bits (594), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/342 (40%), Positives = 201/342 (58%), Gaps = 56/342 (16%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           MG DYY  L ++RGA+++++K++Y+R A+++HPDKN      AE KFK I+EAYDVLSDP
Sbjct: 1   MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPG--AEEKFKEIAEAYDVLSDP 58

Query: 61  RKRQIYDLYGPEGLKASD-------------FGTPSYHHPHD--TKPCATRNNNNN---- 101
           RKR+I+D YG EGLK S              F    +  PH    +    RN  +N    
Sbjct: 59  RKREIFDRYGEEGLKGSGPSGGSSGGTNGTSFSYTFHGDPHAMFAEFFGGRNPFDNFFGQ 118

Query: 102 ------------------------NHRAGGAGPKPTPT------PIETQLLCTLEELYKG 131
                                   N   G + P   PT      P+   L  +LEE+Y G
Sbjct: 119 RNGEEGMDIDDPFSGFPMGMGGFTNMNFGRSRPAQEPTRKKQDPPVTHDLRVSLEEIYSG 178

Query: 132 ARKKMKIS--RVLPDHFGKPITVQE-ILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLI 188
             KKMKIS  R+ PD  GK I  ++ IL I++K GWK+GTKITFP++G+Q     PAD++
Sbjct: 179 CTKKMKISHKRLNPD--GKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIPADIV 236

Query: 189 FVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVV 248
           FV+++KPH +F+RDG+D++   +ISL EAL G ++N+  LDGR + +   D+I+PG    
Sbjct: 237 FVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRK 296

Query: 249 IPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRAL 290
           +P EG+P+ K P K+G+LII+F+++FP R+    ++ L++ L
Sbjct: 297 VPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 338

Interacts with HSP70 and can stimulate its ATPase activity. Stimulates the association between HSC70 and HIP.

Bos taurus (taxid: 9913)

>sp|Q9QYJ3|DNJB1_MOUSE DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2 SV=3

 Score =  230 bits (586), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/346 (39%), Positives = 198/346 (57%), Gaps = 64/346 (18%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           MG DYY  L ++RGA++D++K++Y+R A+++HPDKN      AE KFK I+EAYDVLSDP
Sbjct: 1   MGKDYYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPG--AEEKFKEIAEAYDVLSDP 58

Query: 61  RKRQIYDLYG-----------------------------PEGLKASDFGTPSYHHPHDTK 91
           RKR+I+D YG                             P  + A  FG     +P DT 
Sbjct: 59  RKREIFDRYGEEGLKGGSPSGGSSGGANGTSFSYTFHGDPHAMFAEFFGG---RNPFDTF 115

Query: 92  PCATRNNNN------------------NNHRAGGAGPKPTPT------PIETQLLCTLEE 127
               RN                      N   G + P   PT      P+   L  +LEE
Sbjct: 116 -FGQRNGEEGMDIDDTFSSFPMGMGGFTNMNFGRSRPSQEPTRKKQDPPVTHDLRVSLEE 174

Query: 128 LYKGARKKMKIS--RVLPDHFGKPITVQE-ILKIDIKPGWKKGTKITFPEKGNQEPGLPP 184
           +Y G  KKMKIS  R+ PD  GK I  ++ IL I++K GWK+GTKITFP++G+Q     P
Sbjct: 175 IYSGCTKKMKISHKRLNPD--GKSIRNEDKILTIEVKRGWKEGTKITFPKEGDQTSNNIP 232

Query: 185 ADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPG 244
           AD++FV+++KPH +F+RDG+D++   +ISL EAL G ++N+  LDGR + +   D+I+PG
Sbjct: 233 ADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPG 292

Query: 245 SEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRAL 290
               +P EG+P+ K P K+G+L+I+F+++FP R+    ++ L++ L
Sbjct: 293 MRRKVPGEGLPLPKTPEKRGDLVIEFEVIFPERIPVSSRTILEQVL 338

Interacts with HSP70 and can stimulate its ATPase activity. Stimulates the association between HSC70 and HIP.

Mus musculus (taxid: 10090)

>sp|Q5R8J8|DNJB4_PONAB DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1

 Score =  228 bits (580), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 131/337 (38%), Positives = 196/337 (58%), Gaps = 50/337 (14%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           MG DYY IL + +GA+++D+KK+Y++ A+K+HPDKN +   QAE KFK ++EAY+VLSDP
Sbjct: 1   MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSP--QAEEKFKEVAEAYEVLSDP 58

Query: 61  RKRQIYDLYGPEGLKASD---------FGTPSYHHPHDTKPCATRNNN----NNNHRAGG 107
           +KR+IYD +G EGLK            F    +  PH T       +N        R GG
Sbjct: 59  KKREIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHATFAAFFGGSNPFEIFFGRRMGG 118

Query: 108 A------------------------------GP---KPTPTPIETQLLCTLEELYKGARK 134
                                          GP   K  P P+  +L  +LEE+Y G  K
Sbjct: 119 GRDSEEMEMDGDPFSAFGFSMNGYPRDRNSVGPSRLKQDP-PVIHELRVSLEEIYSGCTK 177

Query: 135 KMKISRVLPDHFGKPITVQE-ILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEE 193
           +MKISR   +  G+    ++ IL I+IK GWK+GTKITFP +G++ P   PAD++F++++
Sbjct: 178 RMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADIVFIIKD 237

Query: 194 KPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEG 253
           K H  F+RDG++++   KISL EAL G S+N+  LDGRN+ + V DI++PG    I   G
Sbjct: 238 KDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRRRIIGYG 297

Query: 254 MPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRAL 290
           +P  K+P ++G+L+I+F++ FP  +++  K  L++ L
Sbjct: 298 LPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHL 334

Probable chaperone.

Pongo abelii (taxid: 9601)

>sp|Q9UDY4|DNJB4_HUMAN DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1

 Score =  227 bits (579), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 131/337 (38%), Positives = 196/337 (58%), Gaps = 50/337 (14%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           MG DYY IL + +GA+++D+KK+Y++ A+K+HPDKN +   QAE KFK ++EAY+VLSDP
Sbjct: 1   MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKSP--QAEEKFKEVAEAYEVLSDP 58

Query: 61  RKRQIYDLYGPEGLKASD---------FGTPSYHHPHDTKPCATRNNN----NNNHRAGG 107
           +KR+IYD +G EGLK            F    +  PH T       +N        R GG
Sbjct: 59  KKREIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHATFAAFFGGSNPFEIFFGRRMGG 118

Query: 108 A------------------------------GP---KPTPTPIETQLLCTLEELYKGARK 134
                                          GP   K  P P+  +L  +LEE+Y G  K
Sbjct: 119 GRDSEEMEIDGDPFSAFGFSMNGYPRDRNSVGPSRLKQDP-PVIHELRVSLEEIYSGCTK 177

Query: 135 KMKISRVLPDHFGKPITVQE-ILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEE 193
           +MKISR   +  G+    ++ IL I+IK GWK+GTKITFP +G++ P   PAD++F++++
Sbjct: 178 RMKISRKRLNADGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADIVFIIKD 237

Query: 194 KPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEG 253
           K H  F+RDG++++   KISL EAL G S+N+  LDGRN+ + V DI++PG    I   G
Sbjct: 238 KDHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRNIPMSVNDIVKPGMRRRIIGYG 297

Query: 254 MPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRAL 290
           +P  K+P ++G+L+I+F++ FP  +++  K  L++ L
Sbjct: 298 LPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHL 334

Probable chaperone.

Homo sapiens (taxid: 9606)

>sp|O89114|DNJB5_MOUSE DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1

 Score =  226 bits (577), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 135/347 (38%), Positives = 198/347 (57%), Gaps = 59/347 (17%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           MG DYY IL +  GA ED++KK+Y+++A+K+HPDKN   N  AE KFK I+EAYDVLSDP
Sbjct: 1   MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPN--AEEKFKEIAEAYDVLSDP 58

Query: 61  RKRQIYDLYGPEGLK-------------------------ASDFGTPS-----YHHPHDT 90
           +KR +YD YG EGLK                         AS FG  +     +     T
Sbjct: 59  KKRSLYDQYGEEGLKTGGGSSGGSGGSFHYTFHGDPHATFASFFGGSNPFDIFFASSRST 118

Query: 91  KPCAT-------------------RNNNNNNHRAGGAGPKP-------TPTPIETQLLCT 124
           +P +                    R   N   R     P+P          P+  +L  +
Sbjct: 119 RPFSGFDPDDMDVDEDEDPFGAFGRFGFNGLSRGPRRAPEPLYPRRKVQDPPVVHELRVS 178

Query: 125 LEELYKGARKKMKISRVLPDHFGKPITVQE-ILKIDIKPGWKKGTKITFPEKGNQEPGLP 183
           LEE+Y G+ K+MKI+R   +  G+ +  ++ IL I IK GWK+GTKITFP++G+  P   
Sbjct: 179 LEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPKEGDATPDNI 238

Query: 184 PADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQP 243
           PAD++FV+++KPHA F+RDG +++ +  ISL EAL G ++N+  +DGR + LP  D+I+P
Sbjct: 239 PADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCNDVIKP 298

Query: 244 GSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRAL 290
           G+   +  EG+P  K P+++G+LI++F + FP RLT + +  LK+ L
Sbjct: 299 GTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHL 345

Mus musculus (taxid: 10090)

>sp|O75953|DNJB5_HUMAN DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=1 SV=1

 Score =  226 bits (576), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 135/347 (38%), Positives = 198/347 (57%), Gaps = 59/347 (17%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           MG DYY IL +  GA ED++KK+Y+++A+K+HPDKN   N  AE KFK I+EAYDVLSDP
Sbjct: 1   MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPN--AEEKFKEIAEAYDVLSDP 58

Query: 61  RKRQIYDLYGPEGLK-------------------------ASDFGTPS-----YHHPHDT 90
           +KR +YD YG EGLK                         AS FG  +     +     T
Sbjct: 59  KKRGLYDQYGEEGLKTGGGTSGGSSGSFHYTFHGDPHATFASFFGGSNPFDIFFASSRST 118

Query: 91  KPCAT-------------------RNNNNNNHRAGGAGPKP-------TPTPIETQLLCT 124
           +P +                    R   N   R     P+P          P+  +L  +
Sbjct: 119 RPFSGFDPDDMDVDEDEDPFGAFGRFGFNGLSRGPRRAPEPLYPRRKVQDPPVVHELRVS 178

Query: 125 LEELYKGARKKMKISRVLPDHFGKPITVQE-ILKIDIKPGWKKGTKITFPEKGNQEPGLP 183
           LEE+Y G+ K+MKI+R   +  G+ +  ++ IL I IK GWK+GTKITFP++G+  P   
Sbjct: 179 LEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRGWKEGTKITFPKEGDATPDNI 238

Query: 184 PADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQP 243
           PAD++FV+++KPHA F+RDG +++ +  ISL EAL G ++N+  +DGR + LP  D+I+P
Sbjct: 239 PADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGCTVNIPTIDGRVIPLPCNDVIKP 298

Query: 244 GSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRAL 290
           G+   +  EG+P  K P+++G+LI++F + FP RLT + +  LK+ L
Sbjct: 299 GTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLTPQTRQILKQHL 345

Homo sapiens (taxid: 9606)

>sp|P25685|DNJB1_HUMAN DnaJ homolog subfamily B member 1 OS=Homo sapiens GN=DNAJB1 PE=1 SV=4

 Score =  224 bits (572), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 133/345 (38%), Positives = 197/345 (57%), Gaps = 62/345 (17%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           MG DYY  L ++RGA+++++K++Y+R A+++HPDKN      AE KFK I+EAYDVLSDP
Sbjct: 1   MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPG--AEEKFKEIAEAYDVLSDP 58

Query: 61  RKRQIYDLYG-----------------------------PEGLKASDFGTPSYHHPHDT- 90
           RKR+I+D YG                             P  + A  FG     +P DT 
Sbjct: 59  RKREIFDRYGEEGLKGSGPSGGSGGGANGTSFSYTFHGDPHAMFAEFFGG---RNPFDTF 115

Query: 91  -------------KPCA---------TRNNNNNNHRAGGAGPKPTPTPIETQLLCTLEEL 128
                         P +         T  N   +  A     K    P+   L  +LEE+
Sbjct: 116 FGQRNGEEGMDIDDPFSGFPMGMGGFTNVNFGRSRSAQEPARKKQDPPVTHDLRVSLEEI 175

Query: 129 YKGARKKMKIS--RVLPDHFGKPITVQE-ILKIDIKPGWKKGTKITFPEKGNQEPGLPPA 185
           Y G  KKMKIS  R+ PD  GK I  ++ IL I++K GWK+GTKITFP++G+Q     PA
Sbjct: 176 YSGCTKKMKISHKRLNPD--GKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPA 233

Query: 186 DLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGS 245
           D++FV+++KPH +F+RDG+D++   +ISL EAL G ++N+  LDGR + +   D+I+PG 
Sbjct: 234 DIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGM 293

Query: 246 EVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRAL 290
              +P EG+P+ K P K+G+LII+F+++FP R+    ++ L++ L
Sbjct: 294 RRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 338

Interacts with HSP70 and can stimulate its ATPase activity. Stimulates the association between HSC70 and HIP.

Homo sapiens (taxid: 9606)

>sp|Q2KIT4|DNJB4_BOVIN DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1

 Score =  222 bits (565), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 127/337 (37%), Positives = 195/337 (57%), Gaps = 50/337 (14%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           MG DYY IL + +GA+++D+KK+Y++ A+++HPDKN +   QAE +FK ++EAY+VLSDP
Sbjct: 1   MGKDYYCILGIEKGASDEDIKKAYRKQALRFHPDKNKSP--QAEERFKEVAEAYEVLSDP 58

Query: 61  RKRQIYDLYGPEGLKASD---------FGTPSYHHPHDTKPCATRNNN----NNNHRAGG 107
           +KR+IYD +G EGLK            F    +  PH T       +N        R GG
Sbjct: 59  KKREIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHATFAAFFGGSNPFEIFFGRRMGG 118

Query: 108 A------------------------------GP---KPTPTPIETQLLCTLEELYKGARK 134
                                          GP   K  P P+  +L  +LEE+Y G  K
Sbjct: 119 GRDSDEMEVDGDPFGAFGFSMNGYPRDRNSVGPSRLKQDP-PVIHELRVSLEEIYSGCTK 177

Query: 135 KMKISRVLPDHFGKPITVQE-ILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEE 193
           +MKISR   +  G+    ++ IL I+IK GWK+GTKITFP +G++ P   PAD++FV+++
Sbjct: 178 RMKISRKRLNPDGRSYRTEDKILTIEIKKGWKEGTKITFPREGDETPTSIPADIVFVIKD 237

Query: 194 KPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEG 253
           K H  F+RDG++++   KISL EAL G S+N+  +DGR + + + DI++PG    I   G
Sbjct: 238 KDHPKFKRDGSNIIYTAKISLREALCGCSINVPTMDGRTIPMTINDIVKPGMRRRIIGYG 297

Query: 254 MPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRAL 290
           +P  K+P ++G+L+I+F++ FP  +++  K  L++ L
Sbjct: 298 LPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHL 334

Probable chaperone.

Bos taurus (taxid: 9913)

>sp|P59910|DJB13_HUMAN DnaJ homolog subfamily B member 13 OS=Homo sapiens GN=DNAJB13 PE=2 SV=1

 Score =  219 bits (557), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 128/317 (40%), Positives = 193/317 (60%), Gaps = 30/317 (9%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAK-FKLISEAYDVLSD 59
           MG DYY++L ++R + +  +K++Y+RLA+K HP K   +N+ + A+ F+ I+EAYDVLSD
Sbjct: 1   MGQDYYSVLGITRNSEDAQIKQAYRRLALKHHPLK---SNEPSSAEIFRQIAEAYDVLSD 57

Query: 60  PRKRQIYDLYGPEGLKAS---DFGTPS-------YHHPHDTKPCATRNNNN--------- 100
           P KR IYD +G EGLK     +FG+ +       +H   +         NN         
Sbjct: 58  PMKRGIYDKFGEEGLKGGIPLEFGSQTPWTTGYVFHGKPEKVFHEFFGGNNPFSEFFDAE 117

Query: 101 ------NNHRAGGAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQE 154
                 N     G G K     +E  L  +LE+L+ G  KK+KISR + +  G   T+++
Sbjct: 118 GSEVDLNFGGLQGRGVKKQDPQVERDLYLSLEDLFFGCTKKIKISRRVLNEDGYSSTIKD 177

Query: 155 -ILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKIS 213
            IL ID+KPGW++GT+ITF ++G+Q P + PAD+IF+V+EK H  F+R+ ++L   + I 
Sbjct: 178 KILTIDVKPGWRQGTRITFEKEGDQGPNIIPADIIFIVKEKLHPRFRRENDNLFFVNPIP 237

Query: 214 LLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIM 273
           L +ALT  ++ +  LD R L +P+ DII P     +P EGMP+ +DP+KKG+L I FDI 
Sbjct: 238 LGKALTCCTVEVRTLDDRLLNIPINDIIHPKYFKKVPGEGMPLPEDPTKKGDLFIFFDIQ 297

Query: 274 FPSRLTAEQKSDLKRAL 290
           FP+RLT ++K  L++AL
Sbjct: 298 FPTRLTPQKKQMLRQAL 314

May be involved in inhibiting testis spermatogenesis apoptosis.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	295
224100435	317	predicted protein [Populus trichocarpa]	0.979	0.911	0.656	1e-114
118486073	317	unknown [Populus trichocarpa]	0.979	0.911	0.656	1e-114
224100239	314	predicted protein [Populus trichocarpa]	0.983	0.923	0.662	1e-113
255558264	321	Curved DNA-binding protein, putative [Ri	0.989	0.909	0.653	1e-112
297849360	342	hypothetical protein ARALYDRAFT_471147 [	0.986	0.850	0.587	1e-110
449434843	316	PREDICTED: dnaJ homolog subfamily B memb	0.983	0.917	0.657	1e-109
449478479	322	PREDICTED: dnaJ homolog subfamily B memb	0.983	0.900	0.644	1e-108
15218515	349	putative DNAJ heat-shock protein [Arabid	0.986	0.833	0.573	1e-108
297840613	334	predicted protein [Arabidopsis lyrata su	0.989	0.874	0.600	1e-105
15218901	331	putative DNAJ heat shock protein [Arabid	0.989	0.882	0.6	1e-105

>gi|224100435|ref|XP_002311874.1| predicted protein [Populus trichocarpa] gi|222851694|gb|EEE89241.1| predicted protein [Populus trichocarpa]

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 208/317 (65%), Positives = 245/317 (77%), Gaps = 28/317 (8%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           MGVDYYNILK++R ATE+D+KK+YKRLAMKWHPDKNP   ++AEAKFKLISEAYDVLSDP
Sbjct: 1   MGVDYYNILKLNRNATEEDMKKAYKRLAMKWHPDKNPVNKKEAEAKFKLISEAYDVLSDP 60

Query: 61  RKRQIYDLYGPEGLKASD--------FGTPSYHHPHDTKPCAT----------------- 95
            KRQIYDLYG EGLK+ D         G     +P D +                     
Sbjct: 61  NKRQIYDLYGEEGLKSFDQIPPPTTNVGASFRFNPRDAEDIFAEFFGGGGGSGGVGKGYF 120

Query: 96  RNNNNNNHRAGGAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEI 155
           RNNN NN+   GA       P+E++LLCTLEELYKG R+KM+ISR +PD FGKP TV+EI
Sbjct: 121 RNNNGNNY---GAELNRKAAPVESKLLCTLEELYKGTRRKMRISRSVPDDFGKPKTVEEI 177

Query: 156 LKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLL 215
           LKIDIKPGWKKGTKITFPEKGNQEPG+ PADLIFVV+EKPH+VF+RDGNDLV+N KISLL
Sbjct: 178 LKIDIKPGWKKGTKITFPEKGNQEPGITPADLIFVVDEKPHSVFKRDGNDLVINQKISLL 237

Query: 216 EALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFP 275
           EALTG ++ LT LDGR L +PVTDI++PG E+++ NEGMPISK+P+K+GNL IKFD+ FP
Sbjct: 238 EALTGKTIELTTLDGRYLPVPVTDIVKPGQELLVSNEGMPISKEPTKRGNLRIKFDVTFP 297

Query: 276 SRLTAEQKSDLKRALGG 292
           +RLT EQKSDLK+ALG 
Sbjct: 298 TRLTVEQKSDLKKALGA 314

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118486073|gb|ABK94880.1| unknown [Populus trichocarpa]

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 208/317 (65%), Positives = 245/317 (77%), Gaps = 28/317 (8%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           MGVDYYNILK++R ATE+D+KK+YKRLAMKWHPDKNP   ++AEAKFKLISEAYDVLSDP
Sbjct: 1   MGVDYYNILKLNRNATEEDMKKAYKRLAMKWHPDKNPVNKKEAEAKFKLISEAYDVLSDP 60

Query: 61  RKRQIYDLYGPEGLKASD--------FGTPSYHHPHDTKPCAT----------------- 95
            KRQIYDLYG EGLK+ D         G     +P D +                     
Sbjct: 61  NKRQIYDLYGEEGLKSFDQIPPPTTNVGASFRFNPRDAEDIFAEFFGVGGGSGGVGKGYF 120

Query: 96  RNNNNNNHRAGGAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEI 155
           RNNN NN+   GA       P+E++LLCTLEELYKG R+KM+ISR +PD FGKP TV+EI
Sbjct: 121 RNNNGNNY---GAELNRKAAPVESKLLCTLEELYKGTRRKMRISRSVPDDFGKPKTVEEI 177

Query: 156 LKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLL 215
           LKIDIKPGWKKGTKITFPEKGNQEPG+ PADLIFVV+EKPH+VF+RDGNDLV+N KISLL
Sbjct: 178 LKIDIKPGWKKGTKITFPEKGNQEPGITPADLIFVVDEKPHSVFKRDGNDLVINQKISLL 237

Query: 216 EALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFP 275
           EALTG ++ LT LDGR L +PVTDI++PG E+++ NEGMPISK+P+K+GNL IKFD+ FP
Sbjct: 238 EALTGKTIELTTLDGRYLPVPVTDIVKPGQELLVSNEGMPISKEPTKRGNLRIKFDVTFP 297

Query: 276 SRLTAEQKSDLKRALGG 292
           +RLT EQKSDLK+ALG 
Sbjct: 298 TRLTVEQKSDLKKALGA 314

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100239|ref|XP_002311798.1| predicted protein [Populus trichocarpa] gi|222851618|gb|EEE89165.1| predicted protein [Populus trichocarpa]

 Score =  413 bits (1061), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 206/311 (66%), Positives = 241/311 (77%), Gaps = 21/311 (6%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           MG DYYN+LK++R ATEDD+KK+YKRLAMKWHPDKNP   ++AEAKFKLISEAYDVLSDP
Sbjct: 1   MGFDYYNVLKLNRNATEDDMKKAYKRLAMKWHPDKNPVNKKEAEAKFKLISEAYDVLSDP 60

Query: 61  RKRQIYDLYGPEGLKASD--------FGTPSYHHPHDTKPCATR-------------NNN 99
            KRQIYDLYG EGLK+ D         G     +P D     +                 
Sbjct: 61  NKRQIYDLYGEEGLKSFDQAPPPNTNVGASFKFNPRDADDIFSEFFGSGGSDGVGKGYFR 120

Query: 100 NNNHRAGGAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKID 159
           NNNH + GA       P+E++LLCTLEELYKG R+KM+ISR +PD FGKP T++EILKID
Sbjct: 121 NNNHNSYGAEVNRKAAPVESKLLCTLEELYKGTRRKMRISRSVPDDFGKPKTIEEILKID 180

Query: 160 IKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALT 219
           IKPGWKKGTKITFPEKGNQEPG  PADLIFVV+EKPH VF+RDGNDLVVN K+SLLEALT
Sbjct: 181 IKPGWKKGTKITFPEKGNQEPGTIPADLIFVVDEKPHPVFKRDGNDLVVNQKMSLLEALT 240

Query: 220 GLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLT 279
           G ++ LT LDGR LT+PV+DI++PG EV+I +EGMP+SK+P+K+GNL IKFDI FPSRLT
Sbjct: 241 GKTIELTTLDGRYLTVPVSDIVKPGHEVLISDEGMPVSKEPNKRGNLRIKFDITFPSRLT 300

Query: 280 AEQKSDLKRAL 290
           AEQKSDLK+AL
Sbjct: 301 AEQKSDLKKAL 311

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558264|ref|XP_002520159.1| Curved DNA-binding protein, putative [Ricinus communis] gi|223540651|gb|EEF42214.1| Curved DNA-binding protein, putative [Ricinus communis]

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 209/320 (65%), Positives = 244/320 (76%), Gaps = 28/320 (8%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           MGVDYYNILKV+R A +DDLK++YKRLAMKWHPDKNP   ++AEAKFK ISEAYDVLSDP
Sbjct: 1   MGVDYYNILKVNRKAADDDLKRAYKRLAMKWHPDKNPLNKKEAEAKFKQISEAYDVLSDP 60

Query: 61  RKRQIYDLYGPEGLKASDFGTPS--------------YHHPHDTKPC------------- 93
           +KRQIYDLYG EGLK+ +FG                   +P D +               
Sbjct: 61  QKRQIYDLYGEEGLKSFEFGGGDAPPPPPQTAANGGFRFNPRDAEDIFNEFFGGSGGGGG 120

Query: 94  ATRNNNNNNHRAGGAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQ 153
           + +N  + N   G  G K     IE++LLC+LEELYKG R+KM+ISR +PD FGKP TV 
Sbjct: 121 SAKNGFHKNGEMGNQGTKKAAA-IESKLLCSLEELYKGTRRKMRISRSVPDGFGKPKTVD 179

Query: 154 EILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKIS 213
           EILKIDIKPGWKKGTKITFPEKGNQEPG+  ADLIFVV+EKPH+VF+RDGNDL+VN K+S
Sbjct: 180 EILKIDIKPGWKKGTKITFPEKGNQEPGVVAADLIFVVDEKPHSVFKRDGNDLIVNQKLS 239

Query: 214 LLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIM 273
           LLEALTG +++LT LDGR L++PVTDII+PG E+VIPNEGMPISK+P KKG L IKFD+ 
Sbjct: 240 LLEALTGKTVDLTTLDGRYLSIPVTDIIKPGHEIVIPNEGMPISKEPHKKGKLRIKFDVT 299

Query: 274 FPSRLTAEQKSDLKRALGGV 293
           FPSRLTAEQKSDLKR LGGV
Sbjct: 300 FPSRLTAEQKSDLKRVLGGV 319

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297849360|ref|XP_002892561.1| hypothetical protein ARALYDRAFT_471147 [Arabidopsis lyrata subsp. lyrata] gi|297338403|gb|EFH68820.1| hypothetical protein ARALYDRAFT_471147 [Arabidopsis lyrata subsp. lyrata]

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 201/342 (58%), Positives = 248/342 (72%), Gaps = 51/342 (14%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           MGVDYYN+LKV+R A EDDLKKSY+R+AMKWHPDKNP T ++AEAKFK ISEAYDVLSDP
Sbjct: 1   MGVDYYNVLKVNRNANEDDLKKSYRRMAMKWHPDKNPTTKKEAEAKFKQISEAYDVLSDP 60

Query: 61  RKRQIYDLYGPEGLKASDFGTPSYHHPHDTKPCATRNNNNNNH----------------- 103
           ++RQIYD YG EGLK++D  T +    H  +   + +N+   +                 
Sbjct: 61  QRRQIYDQYGEEGLKSTDLPTAAETAAHQQQRSYSSSNSEFRYYPRDAEDIFAEFFGESG 120

Query: 104 --------------------------RAGGAGPKPTPTP-------IETQLLCTLEELYK 130
                                      AG    + TP P       IE++L CTLEELYK
Sbjct: 121 DTFGGGSSGRTRGDGADGGGRRFKSAEAGSQANRKTPPPANRKAPAIESKLACTLEELYK 180

Query: 131 GARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFV 190
           GA+KKM+ISRV+PD FGKP TVQEILKIDIKPGWKKGTKITFPEKGNQEPG+ PADLIFV
Sbjct: 181 GAKKKMRISRVVPDDFGKPKTVQEILKIDIKPGWKKGTKITFPEKGNQEPGVTPADLIFV 240

Query: 191 VEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIP 250
           V+EKPH+VF+RDGNDL++  K+SL++ALTGL++++T LDGRNLT+PV DI++PG E+VIP
Sbjct: 241 VDEKPHSVFKRDGNDLILEKKVSLIDALTGLTISVTTLDGRNLTIPVLDIVKPGQEIVIP 300

Query: 251 NEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG 292
           NEGMP +KDP K+G+L + F+I+FPSRLT+EQK+DLKR LGG
Sbjct: 301 NEGMP-TKDPLKRGDLRVNFEILFPSRLTSEQKNDLKRVLGG 341

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434843|ref|XP_004135205.1| PREDICTED: dnaJ homolog subfamily B member 4-like [Cucumis sativus]

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 207/315 (65%), Positives = 241/315 (76%), Gaps = 25/315 (7%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           MGVDYYN+L V+R A EDDLK+SYKRLAMKWHPDKNP   ++AEAKFK ISEAYDVLSD 
Sbjct: 2   MGVDYYNVLMVNRNANEDDLKRSYKRLAMKWHPDKNPYNKKEAEAKFKQISEAYDVLSDA 61

Query: 61  RKRQIYDLYGPEGLKASDF-----GTPSYHH-PHDT--------------KPCATRNNN- 99
           +KRQIYDLYG E LK++DF       PS+ + P D               K    R    
Sbjct: 62  KKRQIYDLYGEEALKSADFVPPPNSNPSFSYIPRDADDIFAEFFGGAGSGKSRGFRGEGL 121

Query: 100 --NNNHRAGGAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILK 157
             N    A     +  P  IE++LLC+LEELYKG+R+KM+ISR +PD FGKP TV E+LK
Sbjct: 122 FKNGKAEAVKQTNRKAPA-IESKLLCSLEELYKGSRRKMRISRTVPDEFGKPKTVDEVLK 180

Query: 158 IDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEA 217
           IDIKPGWKKGTKITFPEKGNQEPG+ PADLIF+++EKPH VF+RDGNDLVVN KISLLEA
Sbjct: 181 IDIKPGWKKGTKITFPEKGNQEPGVAPADLIFIIDEKPHPVFERDGNDLVVNQKISLLEA 240

Query: 218 LTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSR 277
           LTG +LN+T LDGR+L   VTDI++PG EVVI NEGMPISK+P+KKGNL IKFDI+FPS+
Sbjct: 241 LTGKTLNITTLDGRDLPT-VTDIVKPGYEVVIQNEGMPISKEPNKKGNLRIKFDIIFPSK 299

Query: 278 LTAEQKSDLKRALGG 292
           LT EQKSDL+RALGG
Sbjct: 300 LTFEQKSDLRRALGG 314

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449478479|ref|XP_004155329.1| PREDICTED: dnaJ homolog subfamily B member 4-like [Cucumis sativus]

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 207/321 (64%), Positives = 245/321 (76%), Gaps = 31/321 (9%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           MGVDYYN+L V+R A EDDLK+SYKRLAMKWHPDKNP   ++AEAKFK ISEAYDVLSD 
Sbjct: 2   MGVDYYNVLMVNRNANEDDLKRSYKRLAMKWHPDKNPYNKKEAEAKFKQISEAYDVLSDA 61

Query: 61  RKRQIYDLYGPEGLKASDFGTPSYHHP--HDTKPCATRNNNNNNHRA---GGAGP----- 110
           +KRQIYDLYG E LK++DF  P   +P  +   P +    + ++  A   GGAG      
Sbjct: 62  KKRQIYDLYGEEALKSADFVPPPNSNPSIYLVTPTSYIPRDADDIFAEFFGGAGSGKSRG 121

Query: 111 -------------------KPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPIT 151
                              +  P  IE++LLC+LEELYKG+R+KM+ISR +PD FGKP T
Sbjct: 122 FRGEGLFKNGKAEAVKQTNRKAPA-IESKLLCSLEELYKGSRRKMRISRTVPDEFGKPKT 180

Query: 152 VQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHK 211
           V E+LKIDIKPGWKKGTKITFPEKGNQEPG+ PADLIF+++EKPH VF+RDGNDLVVN K
Sbjct: 181 VDEVLKIDIKPGWKKGTKITFPEKGNQEPGVAPADLIFIIDEKPHPVFERDGNDLVVNQK 240

Query: 212 ISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFD 271
           ISLLEALTG +LN+T LDGR+L   VTDI++PG EVVI NEGMPISK+P+KKGNL IKFD
Sbjct: 241 ISLLEALTGKTLNITTLDGRDLPT-VTDIVKPGYEVVIQNEGMPISKEPNKKGNLRIKFD 299

Query: 272 IMFPSRLTAEQKSDLKRALGG 292
           I+FPS+LT EQKSDL+RALGG
Sbjct: 300 IIFPSKLTFEQKSDLRRALGG 320

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15218515|ref|NP_172506.1| putative DNAJ heat-shock protein [Arabidopsis thaliana] gi|4914337|gb|AAD32885.1|AC005489_23 F14N23.23 [Arabidopsis thaliana] gi|13430680|gb|AAK25962.1|AF360252_1 putative heat-shock protein [Arabidopsis thaliana] gi|14532888|gb|AAK64126.1| putative heat-shock protein [Arabidopsis thaliana] gi|332190448|gb|AEE28569.1| putative DNAJ heat-shock protein [Arabidopsis thaliana]

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 200/349 (57%), Positives = 249/349 (71%), Gaps = 58/349 (16%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           MGVDYYN+LKV+R A EDDLKKSY+R+AMKWHPDKNP + ++AEAKFK ISEAYDVLSDP
Sbjct: 1   MGVDYYNVLKVNRNANEDDLKKSYRRMAMKWHPDKNPTSKKEAEAKFKQISEAYDVLSDP 60

Query: 61  RKRQIYDLYGPEGLKASDFGTPSYHHPHDTKPCATRNNNNNNH----------------- 103
           ++RQIYD YG EGLK++D  T +    H  +   + +N+   +                 
Sbjct: 61  QRRQIYDQYGEEGLKSTDLPTAAETAAHQQQRSYSSSNSEFRYYPRDAEDIFAEFFGESG 120

Query: 104 --------------------------RAGGAGPKPTP------TP--------IETQLLC 123
                                      AG    + TP      TP        IE++L C
Sbjct: 121 DAFGGGSSGRTRGDGGDGGGRRFKSAEAGSQANRKTPPTNKKTTPPANRKAPAIESKLAC 180

Query: 124 TLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLP 183
           TLEELYKGA+KKM+ISRV+PD FGKP TVQEILKIDIKPGWKKGTKITFPEKGNQEPG+ 
Sbjct: 181 TLEELYKGAKKKMRISRVVPDDFGKPKTVQEILKIDIKPGWKKGTKITFPEKGNQEPGVT 240

Query: 184 PADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQP 243
           PADLIFVV+EKPH+VF+RDGNDL++  K+SL++ALTGL++++T LDGR+LT+PV DI++P
Sbjct: 241 PADLIFVVDEKPHSVFKRDGNDLILEKKVSLIDALTGLTISVTTLDGRSLTIPVLDIVKP 300

Query: 244 GSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG 292
           G E+VIPNEGMP +KDP K+G+L + F+I+FPSRLT+EQK+DLKR LGG
Sbjct: 301 GQEIVIPNEGMP-TKDPLKRGDLRVTFEILFPSRLTSEQKNDLKRVLGG 348

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297840613|ref|XP_002888188.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297334029|gb|EFH64447.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/328 (60%), Positives = 239/328 (72%), Gaps = 36/328 (10%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQ-QAEAKFKLISEAYDVLSD 59
           MGVDYYN+L V+  ATEDDLKKSY+RLAMKWHPDKNPA+N+ +AEAKFK ISEAYDVLSD
Sbjct: 1   MGVDYYNVLNVNPTATEDDLKKSYRRLAMKWHPDKNPASNKKEAEAKFKQISEAYDVLSD 60

Query: 60  PRKRQIYDLYGPEGLKASDFGTPSY---------------HHPHDTKPCATR-------- 96
           P KRQIYD YG +GL A++  +                  ++P D +             
Sbjct: 61  PNKRQIYDQYGEDGLTATETASSQQQNHSSGNNNNNAGFRYYPRDAEDIFAEFFGASEKV 120

Query: 97  -------NNNNNNHRAGGAGPKPTPT-----PIETQLLCTLEELYKGARKKMKISRVLPD 144
                       +  AG    + TP       IE++L CTLEELYKG R+KMKISRV+PD
Sbjct: 121 FGGGGGGGGRFKSAEAGSQTNRKTPVNRKAPAIESKLACTLEELYKGGRRKMKISRVVPD 180

Query: 145 HFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGN 204
             GK   V+EILKIDI PGWKKGTKITFPEKGNQEPG+ PADLIFV++EKPH+V+ RDGN
Sbjct: 181 GLGKTKPVEEILKIDITPGWKKGTKITFPEKGNQEPGVTPADLIFVIDEKPHSVYNRDGN 240

Query: 205 DLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKG 264
           DL+V+ K+SLLEALTG++L+LT LDGRNLT+PV DI++PG E+VIPNEGMP+SK+ SK+G
Sbjct: 241 DLIVDKKVSLLEALTGITLSLTTLDGRNLTIPVLDIVKPGQEIVIPNEGMPVSKEVSKRG 300

Query: 265 NLIIKFDIMFPSRLTAEQKSDLKRALGG 292
           +L I F+I FPSRLT+EQK+DLKR LGG
Sbjct: 301 DLRINFEICFPSRLTSEQKTDLKRVLGG 328

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15218901|ref|NP_176181.1| putative DNAJ heat shock protein [Arabidopsis thaliana] gi|5080806|gb|AAD39315.1|AC007258_4 Putative heat shock protein [Arabidopsis thaliana] gi|332195488|gb|AEE33609.1| putative DNAJ heat shock protein [Arabidopsis thaliana]

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/330 (60%), Positives = 237/330 (71%), Gaps = 38/330 (11%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPAT-NQQAEAKFKLISEAYDVLSD 59
           MGVDYYN+L V+  ATEDDLKKSY+RLAMKWHPDKNP +  Q+AEAKFK ISEAYDVLSD
Sbjct: 1   MGVDYYNVLNVNPSATEDDLKKSYRRLAMKWHPDKNPTSIKQEAEAKFKQISEAYDVLSD 60

Query: 60  PRKRQIYDLYGPEGLKASDFGTPSYHH-----------------PHDTKPCATR------ 96
           P KRQIYD YG +GL A++    S  H                 P D +           
Sbjct: 61  PNKRQIYDQYGEDGLTATEATASSQQHNYSSGNNNNYNAGFRYYPRDAEDIFAEFFGASE 120

Query: 97  ---------NNNNNNHRAGGAGPKPTPT-----PIETQLLCTLEELYKGARKKMKISRVL 142
                         +  AG    + TP       IE++L CTLEELYKG R+KMKISRV+
Sbjct: 121 KVFDGGVGGGGRFKSAEAGSQTNRKTPVNRKAPAIESKLACTLEELYKGGRRKMKISRVV 180

Query: 143 PDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRD 202
           PD  GK   V+EILKIDI PGWKKGTKITFPEKGNQEPG+ PADLIFV++EKPH+V++RD
Sbjct: 181 PDGLGKSKPVEEILKIDITPGWKKGTKITFPEKGNQEPGVTPADLIFVIDEKPHSVYKRD 240

Query: 203 GNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSK 262
           GNDL+V+ K+SLLEALTG++L+LT LDGRNLT+PV DI++PG E+VIP+EGMPISK+ SK
Sbjct: 241 GNDLIVDKKVSLLEALTGITLSLTTLDGRNLTIPVLDIVKPGQEIVIPSEGMPISKEGSK 300

Query: 263 KGNLIIKFDIMFPSRLTAEQKSDLKRALGG 292
           +G+L I F+I FPSRLT+EQK+DLKR LGG
Sbjct: 301 RGDLRINFEICFPSRLTSEQKTDLKRVLGG 330

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	295
TAIR|locus:2012743	349	AT1G10350 [Arabidopsis thalian	0.593	0.501	0.744	7.3e-105
TAIR|locus:2825170	331	AT1G59725 [Arabidopsis thalian	0.596	0.531	0.738	1.1e-101
TAIR|locus:2097880	350	AT3G47940 [Arabidopsis thalian	0.6	0.505	0.615	2.1e-90
TAIR|locus:2054809	337	AT2G20560 [Arabidopsis thalian	0.593	0.519	0.634	1e-88
TAIR|locus:2097638	323	AT3G08910 [Arabidopsis thalian	0.583	0.532	0.651	7.2e-88
TAIR|locus:2121368	348	AT4G28480 [Arabidopsis thalian	0.593	0.502	0.617	7.2e-88
TAIR|locus:2179127	335	AT5G01390 [Arabidopsis thalian	0.589	0.519	0.643	1e-84
TAIR|locus:2179429	347	AT5G25530 [Arabidopsis thalian	0.596	0.507	0.562	3.2e-81
ZFIN|ZDB-GENE-040801-192	340	dnajb4 "DnaJ (Hsp40) homolog,	0.589	0.511	0.428	8.7e-65
MGI|MGI:1914285	337	Dnajb4 "DnaJ (Hsp40) homolog,	0.579	0.507	0.459	2e-63

TAIR|locus:2012743 AT1G10350 [Arabidopsis thaliana (taxid:3702)]

 Score = 718 (257.8 bits), Expect = 7.3e-105, Sum P(2) = 7.3e-105
 Identities = 131/176 (74%), Positives = 162/176 (92%)

Query:   117 IETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKG 176
             IE++L CTLEELYKGA+KKM+ISRV+PD FGKP TVQEILKIDIKPGWKKGTKITFPEKG
Sbjct:   174 IESKLACTLEELYKGAKKKMRISRVVPDDFGKPKTVQEILKIDIKPGWKKGTKITFPEKG 233

Query:   177 NQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLP 236
             NQEPG+ PADLIFVV+EKPH+VF+RDGNDL++  K+SL++ALTGL++++T LDGR+LT+P
Sbjct:   234 NQEPGVTPADLIFVVDEKPHSVFKRDGNDLILEKKVSLIDALTGLTISVTTLDGRSLTIP 293

Query:   237 VTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG 292
             V DI++PG E+VIPNEGMP +KDP K+G+L + F+I+FPSRLT+EQK+DLKR LGG
Sbjct:   294 VLDIVKPGQEIVIPNEGMP-TKDPLKRGDLRVTFEILFPSRLTSEQKNDLKRVLGG 348

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2825170 AT1G59725 [Arabidopsis thaliana (taxid:3702)]

 Score = 703 (252.5 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
 Identities = 130/176 (73%), Positives = 158/176 (89%)

Query:   117 IETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKG 176
             IE++L CTLEELYKG R+KMKISRV+PD  GK   V+EILKIDI PGWKKGTKITFPEKG
Sbjct:   155 IESKLACTLEELYKGGRRKMKISRVVPDGLGKSKPVEEILKIDITPGWKKGTKITFPEKG 214

Query:   177 NQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLP 236
             NQEPG+ PADLIFV++EKPH+V++RDGNDL+V+ K+SLLEALTG++L+LT LDGRNLT+P
Sbjct:   215 NQEPGVTPADLIFVIDEKPHSVYKRDGNDLIVDKKVSLLEALTGITLSLTTLDGRNLTIP 274

Query:   237 VTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG 292
             V DI++PG E+VIP+EGMPISK+ SK+G+L I F+I FPSRLT+EQK+DLKR LGG
Sbjct:   275 VLDIVKPGQEIVIPSEGMPISKEGSKRGDLRINFEICFPSRLTSEQKTDLKRVLGG 330

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2097880 AT3G47940 [Arabidopsis thaliana (taxid:3702)]

 Score = 592 (213.5 bits), Expect = 2.1e-90, Sum P(2) = 2.1e-90
 Identities = 109/177 (61%), Positives = 145/177 (81%)

Query:   117 IETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKG 176
             +E  L  +LE+LYKG  KKM+I+R + D  G+ +   EIL I+IKPGWKKGTK+TFP+KG
Sbjct:   173 MENPLPVSLEDLYKGVVKKMRITRNVYDASGRMMVEAEILPIEIKPGWKKGTKLTFPKKG 232

Query:   177 NQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLP 236
             N+EPG+ PAD++FVVEEKPH V++RDGNDL+V+ +I+LLEALTG ++NL  LDGR L +P
Sbjct:   233 NEEPGIIPADIVFVVEEKPHPVYKRDGNDLLVSQEITLLEALTGKTVNLITLDGRTLMIP 292

Query:   237 VTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGGV 293
             +T+II+P  E+V+PNEGMPISK+P KKGNL +K  + +PSRLT++QK +LKR LGGV
Sbjct:   293 LTEIIKPDHEIVVPNEGMPISKEPGKKGNLKLKLSVKYPSRLTSDQKFELKRVLGGV 349

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2054809 AT2G20560 [Arabidopsis thaliana (taxid:3702)]

 Score = 614 (221.2 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
 Identities = 111/175 (63%), Positives = 145/175 (82%)

Query:   117 IETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKG 176
             IE +L C+LE+LYKG  KKM+ISR + D  GK + V+EIL ID+KPGWKKGTKITFPEKG
Sbjct:   163 IENKLPCSLEDLYKGTTKKMRISREIADVSGKTMQVEEILTIDVKPGWKKGTKITFPEKG 222

Query:   177 NQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLP 236
             N++PG+ PADL+F+++EKPH VF R+GNDL+V  KISL+EALTG ++NLT LDGR LT+P
Sbjct:   223 NEQPGVIPADLVFIIDEKPHPVFTREGNDLIVTQKISLVEALTGYTVNLTTLDGRRLTIP 282

Query:   237 VTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291
             VT+++ P  E V+P EGMP+ KD +K+GNL IKF+I FP+RLT+EQK+ +K+ LG
Sbjct:   283 VTNVVHPEYEEVVPKEGMPLQKDQTKRGNLRIKFNIKFPTRLTSEQKTGVKKLLG 337

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS;RCA

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0009408 "response to heat" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

TAIR|locus:2097638 AT3G08910 [Arabidopsis thaliana (taxid:3702)]

 Score = 601 (216.6 bits), Expect = 7.2e-88, Sum P(2) = 7.2e-88
 Identities = 112/172 (65%), Positives = 140/172 (81%)

Query:   117 IETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKG 176
             IE QL C+LE+LYKG  KKMKISR + D  G+P TV+EIL I+IKPGWKKGTKITFPEKG
Sbjct:   147 IERQLPCSLEDLYKGVSKKMKISRDVLDSSGRPTTVEEILTIEIKPGWKKGTKITFPEKG 206

Query:   177 NQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLP 236
             N++ G+ P+DL+F+V+EKPHAVF+RDGNDLV+  KI L+EALTG +  ++ LDGR++T+P
Sbjct:   207 NEQRGIIPSDLVFIVDEKPHAVFKRDGNDLVMTQKIPLVEALTGYTAQVSTLDGRSVTVP 266

Query:   237 VTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKR 288
             + ++I P  E V+  EGMPI KDPSKKGNL IKF + FPSRLT EQKS +KR
Sbjct:   267 INNVISPSYEEVVKGEGMPIPKDPSKKGNLRIKFTVKFPSRLTTEQKSGIKR 318

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2121368 AT4G28480 [Arabidopsis thaliana (taxid:3702)]

 Score = 595 (214.5 bits), Expect = 7.2e-88, Sum P(2) = 7.2e-88
 Identities = 108/175 (61%), Positives = 139/175 (79%)

Query:   117 IETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKG 176
             IE +L C+LE+LYKG  KKMKISR + D  GK + V+EIL I +KPGWKKGTKITFPEKG
Sbjct:   174 IENKLPCSLEDLYKGTTKKMKISREIVDVSGKAMQVEEILTIGVKPGWKKGTKITFPEKG 233

Query:   177 NQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLP 236
             N+ PG+ PADL+F+++EKPH VF R+GNDL+V  K+SL +ALTG + N+  LDGR LT+P
Sbjct:   234 NEHPGVIPADLVFIIDEKPHPVFTREGNDLIVTQKVSLADALTGYTANIATLDGRTLTIP 293

Query:   237 VTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG 291
             +T++I P  E V+P EGMP+ KD +KKGNL IKF+I FP+RLTAEQK+  K+ +G
Sbjct:   294 ITNVIHPEYEEVVPKEGMPLQKDQTKKGNLRIKFNIKFPARLTAEQKAGFKKLIG 348

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2179127 AT5G01390 [Arabidopsis thaliana (taxid:3702)]

 Score = 580 (209.2 bits), Expect = 1.0e-84, Sum P(2) = 1.0e-84
 Identities = 112/174 (64%), Positives = 137/174 (78%)

Query:   117 IETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKG 176
             IE QL C+LE+LYKG  KKMKISR + D  G+P  V+EIL I+IKPGWKKGTKITF EKG
Sbjct:   160 IERQLPCSLEDLYKGVSKKMKISRDVLDSSGRPTPVEEILTIEIKPGWKKGTKITFLEKG 219

Query:   177 NQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLP 236
             N+  G+ P+DL+F+V+EKPH VF+RDGNDLVV  KISL++ALTG +  +T LDGR LT+P
Sbjct:   220 NEHRGVIPSDLVFIVDEKPHPVFKRDGNDLVVMQKISLVDALTGYTAQVTTLDGRTLTVP 279

Query:   237 VTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRAL 290
             V ++I P  E V+  EGMPI KDPS+KGNL I+F I FPS+LT EQKS +KR L
Sbjct:   280 VNNVISPSYEEVVKGEGMPIPKDPSRKGNLRIRFIIKFPSKLTTEQKSGIKRML 333

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

TAIR|locus:2179429 AT5G25530 [Arabidopsis thaliana (taxid:3702)]

 Score = 542 (195.9 bits), Expect = 3.2e-81, Sum P(2) = 3.2e-81
 Identities = 99/176 (56%), Positives = 133/176 (75%)

Query:   117 IETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKG 176
             +E++L C+LEELY G+ +KMKISR + D  G+     EIL I +KPGWKKGTKI FP+KG
Sbjct:   172 VESKLPCSLEELYSGSTRKMKISRSIVDANGRQAQETEILTIVVKPGWKKGTKIKFPDKG 231

Query:   177 NQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLP 236
             N++    PADL+FV++EKPH +F RDGNDL+ + +++L EA+ G ++N+  LDGRNL + 
Sbjct:   232 NEQVNQLPADLVFVIDEKPHDLFTRDGNDLITSRRVTLAEAIGGTTVNINTLDGRNLPVG 291

Query:   237 VTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG 292
             V +I+ PG E V+P EGMPI+K+P  KG+L IKFD+ FP+RLT EQKS LKR L G
Sbjct:   292 VAEIVSPGYEFVVPGEGMPIAKEPRNKGDLKIKFDVQFPARLTTEQKSALKRVLAG 347

GO:0005737 "cytoplasm" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

ZFIN|ZDB-GENE-040801-192 dnajb4 "DnaJ (Hsp40) homolog, subfamily B, member 4" [Danio rerio (taxid:7955)]

 Score = 407 (148.3 bits), Expect = 8.7e-65, Sum P(2) = 8.7e-65
 Identities = 75/175 (42%), Positives = 121/175 (69%)

Query:   117 IETQLLCTLEELYKGARKKMKISRVLPDHFGKPI-TVQEILKIDIKPGWKKGTKITFPEK 175
             I  +L  +LEE++ G+ K+MKISR   +  G+ + T  +IL I+IK GWK+GTKITFP +
Sbjct:   163 IHHELRVSLEEVFHGSTKRMKISRKRLNPDGRTLRTEDKILTIEIKRGWKEGTKITFPRE 222

Query:   176 GNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTL 235
             G++ P   PAD++FV+++KPH  F+R+G+D+V   ++SL ++L G S+ ++ +DG+   +
Sbjct:   223 GDETPNTIPADIVFVIKDKPHGHFRREGSDIVYPVRVSLRQSLCGCSVTVSTIDGKTCNM 282

Query:   236 PVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRAL 290
              +TD+I+PG   VI  +G+P  K+P ++G+LI++FD+ FP  L    K  LKR L
Sbjct:   283 KITDVIKPGMRKVIAGQGLPFPKNPEQRGDLIVEFDVNFPESLPTNAKDVLKRHL 337

GO:0006457 "protein folding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

MGI|MGI:1914285 Dnajb4 "DnaJ (Hsp40) homolog, subfamily B, member 4" [Mus musculus (taxid:10090)]

 Score = 410 (149.4 bits), Expect = 2.0e-63, Sum P(2) = 2.0e-63
 Identities = 79/172 (45%), Positives = 119/172 (69%)

Query:   120 QLLCTLEELYKGARKKMKISRVLPDHFGKPITVQE-ILKIDIKPGWKKGTKITFPEKGNQ 178
             +L  +LEE+Y G  K+MKISR   +  G+    ++ IL I+IK GWK+GTKITFP +G++
Sbjct:   163 ELKVSLEEIYSGCTKRMKISRKRLNPDGRSYRSEDKILTIEIKKGWKEGTKITFPREGDE 222

Query:   179 EPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVT 238
              P   PAD++FV+++K H  F+RDG+++V   KISL EAL G SLN+  +DGRNL + VT
Sbjct:   223 TPNSIPADIVFVIKDKEHPKFKRDGSNIVYTAKISLREALCGCSLNVPTMDGRNLPMSVT 282

Query:   239 DIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRAL 290
             DI++PG    +   G+P  K+P ++G+L+I+FD+ FP  ++A  K  L++ L
Sbjct:   283 DIVKPGMRRRVIGYGLPFPKNPDQRGDLLIEFDVSFPDVISAASKEILRKHL 334

GO:0006457 "protein folding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q3MI00	DNJB1_BOVIN	No assigned EC number	0.4005	0.9694	0.8411	yes	no
Q9UDY4	DNJB4_HUMAN	No assigned EC number	0.3887	0.9728	0.8516	yes	no
Q9D832	DNJB4_MOUSE	No assigned EC number	0.4094	0.9728	0.8516	yes	no
Q5R8J8	DNJB4_PONAB	No assigned EC number	0.3887	0.9728	0.8516	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_Genewise1_v1.C_LG_VIII2831	SubName- Full=Putative uncharacterized protein; (317 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.XIII.1526.1	annotation not avaliable (81 aa)			•						0.496
	grail3.0261001401	hypothetical protein (124 aa)			•						0.494
	eugene3.02610008	hypothetical protein (132 aa)			•						0.494
	eugene3.02080009	hypothetical protein (656 aa)			•						0.494
	eugene3.00130164	hypothetical protein (660 aa)			•						0.494
	eugene3.00120231	hypothetical protein (668 aa)			•						0.494
	estExt_fgenesh4_pg.C_1500058	hypothetical protein (706 aa)			•						0.494
	grail3.0261001101	hypothetical protein (648 aa)			•						0.493
	fgenesh4_pm.C_LG_III000644	hypothetical protein (651 aa)			•						0.493
	fgenesh4_pg.C_LG_VIII000455	hypothetical protein (651 aa)			•						0.493

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	295
cd10747	158	cd10747, DnaJ_C, C-terminal substrate binding doma	1e-48
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	2e-38
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	1e-34
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	3e-34
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	1e-32
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	5e-32
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	1e-29
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	1e-29
pfam00226	63	pfam00226, DnaJ, DnaJ domain	2e-29
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	1e-27
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	7e-26
smart00271	60	smart00271, DnaJ, DnaJ molecular chaperone homolog	1e-25
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	2e-25
PRK14281	397	PRK14281, PRK14281, chaperone protein DnaJ; Provis	1e-24
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	3e-24
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	4e-24
COG2214	237	COG2214, CbpA, DnaJ-class molecular chaperone [Pos	3e-23
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	3e-23
pfam01556	81	pfam01556, DnaJ_C, DnaJ C terminal domain	3e-23
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	4e-23
cd06257	55	cd06257, DnaJ, DnaJ domain or J-domain	2e-22
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	3e-22
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	6e-22
PRK14297	380	PRK14297, PRK14297, chaperone protein DnaJ; Provis	6e-22
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	4e-21
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	5e-21
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	1e-20
PRK14276	380	PRK14276, PRK14276, chaperone protein DnaJ; Provis	1e-20
PRK14286	372	PRK14286, PRK14286, chaperone protein DnaJ; Provis	7e-20
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	9e-20
PRK14288	369	PRK14288, PRK14288, chaperone protein DnaJ; Provis	9e-20
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	2e-19
PRK14283	378	PRK14283, PRK14283, chaperone protein DnaJ; Provis	2e-19
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	6e-19
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	8e-19
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	5e-18
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	6e-18
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	3e-17
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	8e-17
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	1e-16
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	4e-16
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	7e-16
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	1e-15
PRK14281	397	PRK14281, PRK14281, chaperone protein DnaJ; Provis	1e-14
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	2e-14
PRK14283	378	PRK14283, PRK14283, chaperone protein DnaJ; Provis	2e-14
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	3e-14
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	3e-14
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	9e-14
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	8e-13
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	5e-12
COG5407	610	COG5407, SEC63, Preprotein translocase subunit Sec	5e-12
PRK14286	372	PRK14286, PRK14286, chaperone protein DnaJ; Provis	6e-12
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	2e-11
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	5e-11
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	1e-10
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	7e-10
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	7e-10
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	8e-09
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	1e-08
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	3e-08
PTZ00341	1136	PTZ00341, PTZ00341, Ring-infected erythrocyte surf	3e-08
PRK14297	380	PRK14297, PRK14297, chaperone protein DnaJ; Provis	8e-08
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	3e-07
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	1e-06
COG5269	379	COG5269, ZUO1, Ribosome-associated chaperone zuoti	1e-06
PRK14288	369	PRK14288, PRK14288, chaperone protein DnaJ; Provis	5e-05
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	5e-05
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	6e-05

>gnl|CDD|199909 cd10747, DnaJ_C, C-terminal substrate binding domain of DnaJ and HSP40

 Score =  158 bits (403), Expect = 1e-48
 Identities = 58/165 (35%), Positives = 83/165 (50%), Gaps = 12/165 (7%)

Query: 117 IETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQE--ILKIDIKPGWKKGTKITFPE 174
           +   L  TLEE Y G  K++KI R       K   V+E   L + I  G   G ++    
Sbjct: 3   LRYDLELTLEEAYFGKEKEIKIPR-------KVTRVREKKTLTVKIPAGVDDGQRLRLRG 55

Query: 175 KGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNL 233
           +G+  P G PP DL  V+  KPH VF+RDGNDL     ISL EAL G  + +  L G  +
Sbjct: 56  EGDAGPNGGPPGDLYVVIRVKPHPVFRRDGNDLYCEVPISLTEALLGGEIEVPTLGG-KV 114

Query: 234 TLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRL 278
            L +    QPG+ + +  +GMP       +G+L ++  + FP +L
Sbjct: 115 KLKIPPGTQPGTVLRLKGKGMPR-LRGGGRGDLYVEVKVEFPKKL 158

The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70. Length = 158

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score =  138 bits (350), Expect = 2e-38
 Identities = 55/149 (36%), Positives = 79/149 (53%), Gaps = 18/149 (12%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
              DYY IL VS+ A+E+++KK+Y++LA K+HPD+NP  +++AE KFK I+EAY+VLSDP
Sbjct: 2   AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPG-DKEAEEKFKEINEAYEVLSDP 60

Query: 61  RKRQIYDLYGPEGLKASDFGTPSYHHPHD---------TKPCATRNNNNNNHRAGGAGPK 111
            KR  YD +G  G KA  FG   +                         N  R G     
Sbjct: 61  EKRAAYDQFGHAGFKAGGFGGFGFGGFGGDFGDIFEDFFGGGGGGRRRPNRPRRG----- 115

Query: 112 PTPTPIETQLLCTLEELYKGARKKMKISR 140
                +   L  TLEE   G +K+++++R
Sbjct: 116 ---ADLRYNLEITLEEAVFGVKKEIRVTR 141

Length = 371

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score =  128 bits (323), Expect = 1e-34
 Identities = 51/146 (34%), Positives = 75/146 (51%), Gaps = 13/146 (8%)

Query: 4   DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
           DYY IL VS+ A+E+++KK+Y++LA K+HPD+N   +++AE KFK I+EAY+VLSDP KR
Sbjct: 1   DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK--DKEAEEKFKEINEAYEVLSDPEKR 58

Query: 64  QIYDLYGPEGLKASDFGTPSYHHPHDTKPCATRNNNN------NNHRAGGAGPKPTPTP- 116
             YD +G  G      G     +  D       +  +            G   +  P   
Sbjct: 59  AQYDQFGHAGFNGGGGGGGGGFNGFDIGF--FGDFGDIFGDFFGGGGGSGRRRRSGPRRG 116

Query: 117 --IETQLLCTLEELYKGARKKMKISR 140
             +   L  T EE   G  K+++I R
Sbjct: 117 EDLRYDLELTFEEAVFGVEKEIEIPR 142

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score =  127 bits (322), Expect = 3e-34
 Identities = 43/77 (55%), Positives = 58/77 (75%), Gaps = 1/77 (1%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY +L VSR A+ED++KK+Y++LAMK+HPD+NP  +++AE KFK I EAY+VLSDP+KR
Sbjct: 5  DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPG-DKEAEEKFKEIKEAYEVLSDPQKR 63

Query: 64 QIYDLYGPEGLKASDFG 80
            YD YG    +    G
Sbjct: 64 AAYDQYGHAAFEQGGGG 80

Length = 371

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score =  124 bits (312), Expect = 1e-32
 Identities = 60/139 (43%), Positives = 89/139 (64%), Gaps = 4/139 (2%)

Query: 153 QEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKI 212
           ++IL+++I  G     KITF  + +++P   P +++F++ EKPH  F+R+G DL +  KI
Sbjct: 223 RKILEVNIDKGVPNQHKITFHGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKI 282

Query: 213 SLLEALTGLSLNLTALDGRNLTL--PVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKF 270
           SL EALTG    +T LDGR L +  P  ++++PG   VI NEGMP  K P KKGNL + F
Sbjct: 283 SLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTF 342

Query: 271 DIMFPS--RLTAEQKSDLK 287
           +++FP   + T E+K  LK
Sbjct: 343 EVIFPVDRKFTNEEKEILK 361

Length = 421

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score =  120 bits (301), Expect = 5e-32
 Identities = 93/297 (31%), Positives = 143/297 (48%), Gaps = 41/297 (13%)

Query: 4   DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
           DYY IL V + A++D++KK++K+LA K+HPD N   +  AE KFK I+EAY VLSDP KR
Sbjct: 5   DYYAILGVPKNASQDEIKKAFKKLARKYHPDVN--KSPGAEEKFKEINEAYTVLSDPEKR 62

Query: 64  QIYDLYGPEGLKASDFGTPSYHHPHDTKPCATRNNNNNNHRA--------GGAGPKPTPT 115
           +IYD YG     A   G P               + ++  +         GG G      
Sbjct: 63  RIYDTYGTTAASAGWQGPPPGPPGGGDFSGFNVGDFSDFFQQLFGGRGGFGGFGDLFGSV 122

Query: 116 --------PIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKG 167
                    +E +L  TLEE Y+G  K ++++       G+ ++V+      I PG ++G
Sbjct: 123 GRRARKGRDLEAELPLTLEEAYRGGEKVVEVA-------GERLSVR------IPPGVREG 169

Query: 168 TKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTA 227
             I    KG Q       DL  VV   PH VF+ +G+DL     +    A+ G  + +  
Sbjct: 170 QVIRLAGKGRQG-----GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMT 224

Query: 228 LDGR-NLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQK 283
           LDG   +T+P     Q G ++ +  +G P  + P+ +G+   +  I  P+R T E++
Sbjct: 225 LDGPVEVTIPPR--TQAGRKLRLKGKGWP--RGPAGRGDQYAEVRITIPTRPTPEEE 277

Length = 291

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score =  115 bits (289), Expect = 1e-29
 Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 3/139 (2%)

Query: 150 ITVQEILKIDIKPGWKKGTKITFPEKGNQ-EPGLPPADLIFVVEEKPHAVFQRDGNDLVV 208
           +  ++ + ++I  G   G +I    +G     G P  DL   V  KPH +F+RDG+DL  
Sbjct: 209 VKKKKSISVNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYC 268

Query: 209 NHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLII 268
              IS  EA  G  + +  LDGR + L +    Q G    +  +GMP  +    +G+L +
Sbjct: 269 EVPISFTEAALGGEIEVPTLDGR-VKLKIPAGTQTGEVFRLRGKGMPKLR-SGGRGDLYV 326

Query: 269 KFDIMFPSRLTAEQKSDLK 287
           +  +  P  L+ EQK  L+
Sbjct: 327 RVKVETPKNLSDEQKELLE 345

Length = 371

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score =  115 bits (289), Expect = 1e-29
 Identities = 45/77 (58%), Positives = 61/77 (79%), Gaps = 1/77 (1%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY IL V+R A+E+++KKSY++LAMK+HPD+NP  +++AE  FK  +EAY+VLSDP+KR
Sbjct: 5  DYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPG-DKEAEELFKEAAEAYEVLSDPKKR 63

Query: 64 QIYDLYGPEGLKASDFG 80
           IYD YG EGL  + F 
Sbjct: 64 GIYDQYGHEGLSGTGFS 80

Length = 366

>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain

 Score =  106 bits (267), Expect = 2e-29
 Identities = 39/64 (60%), Positives = 52/64 (81%), Gaps = 1/64 (1%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY IL V R A+++++KK+Y++LA+K+HPDKNP  +  AE KFK I+EAY+VLSDP KR
Sbjct: 1  DYYEILGVPRDASDEEIKKAYRKLALKYHPDKNPG-DPAAEEKFKEINEAYEVLSDPEKR 59

Query: 64 QIYD 67
           IYD
Sbjct: 60 AIYD 63

DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score =  109 bits (273), Expect = 1e-27
 Identities = 58/148 (39%), Positives = 82/148 (55%), Gaps = 8/148 (5%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           M  DYY IL V R A+++D+KK+++ LA KWHPD +P    +AE KFK ISEAY+VLSDP
Sbjct: 1   MAKDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDP 60

Query: 61  RKRQIYDLYGPE--GLKASDFGTPSYHHPHDTKPCATR--NNNNNNHRAGGAGPKPTPTP 116
           +KR+ YD  G    G   S+F   ++ H  D      +    N  +    G G + +   
Sbjct: 61  QKRRQYDQTGTVDFGAGGSNFNWDNFTHFSDINDIFNQIFGGNFGSDFFSGFGNQQSTRN 120

Query: 117 IE----TQLLCTLEELYKGARKKMKISR 140
           I+    T L  +LE+ Y G  K++K  R
Sbjct: 121 IDLDIYTNLDISLEDAYYGTEKRIKYRR 148

Length = 365

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score =  104 bits (262), Expect = 7e-26
 Identities = 42/74 (56%), Positives = 54/74 (72%), Gaps = 2/74 (2%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY IL VSR AT++++KK+Y+RLA K+HPD N   N +AE KFK I+EAY VLSDP KR
Sbjct: 4  DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNK--NPEAEEKFKEINEAYQVLSDPEKR 61

Query: 64 QIYDLYGPEGLKAS 77
          ++YD +G      S
Sbjct: 62 KLYDQFGHAAFSGS 75

Length = 382

>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain

 Score = 96.1 bits (240), Expect = 1e-25
 Identities = 36/60 (60%), Positives = 48/60 (80%)

Query: 3  VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRK 62
           DYY IL V R A+ D++KK+Y++LA+K+HPDKNP   ++AE KFK I+EAY+VLSDP K
Sbjct: 1  TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60

Length = 60

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score =  103 bits (259), Expect = 2e-25
 Identities = 40/73 (54%), Positives = 58/73 (79%), Gaps = 1/73 (1%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY IL VS+ A+ +++KK+Y++LA+K+HPDKNP  + +AE +FK +SEAY+VLSD +KR
Sbjct: 2  DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPG-DAEAEKRFKEVSEAYEVLSDAQKR 60

Query: 64 QIYDLYGPEGLKA 76
          + YD YG +G  A
Sbjct: 61 ESYDRYGKDGPFA 73

Length = 391

>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional

 Score =  101 bits (253), Expect = 1e-24
 Identities = 59/166 (35%), Positives = 86/166 (51%), Gaps = 24/166 (14%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           M  DYY +L VSR A +D++KK+Y++LA+K+HPDKNP  N++AE  FK ++EAY+VLS+ 
Sbjct: 1   MKRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNP-DNKEAEEHFKEVNEAYEVLSND 59

Query: 61  RKRQIYDLYGPEGL---KASDFGTPSYHHPHDTKPCATRNNNNNNHRAGGAGPKPTP--- 114
            KR+ YD +G  G+    AS  G        D     +  N+     A   G  P     
Sbjct: 60  DKRRRYDQFGHAGVGSSAASGGGPGYGGGGGDFNDIFSAFNDMFGGGARRGGGSPFGFED 119

Query: 115 -----------------TPIETQLLCTLEELYKGARKKMKISRVLP 143
                            T ++ +L  TLEE+ KG  K +KI + +P
Sbjct: 120 VFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVP 165

Length = 397

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score =  100 bits (251), Expect = 3e-24
 Identities = 37/70 (52%), Positives = 53/70 (75%), Gaps = 2/70 (2%)

Query: 1  MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
          M  DYY +L VSR A++ ++K++Y++LA + HPD NP  +++A+ KFK IS AY+VLSDP
Sbjct: 1  MARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNP--DEEAQEKFKEISVAYEVLSDP 58

Query: 61 RKRQIYDLYG 70
           KR+I DL G
Sbjct: 59 EKRRIVDLGG 68

Length = 378

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score = 99.9 bits (249), Expect = 4e-24
 Identities = 39/67 (58%), Positives = 54/67 (80%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY IL VSR AT++++K++YKRL  +WHPD++P   ++AE KFK I EAY+VLSDP+KR
Sbjct: 5  DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKR 64

Query: 64 QIYDLYG 70
           +YD +G
Sbjct: 65 AMYDRFG 71

Length = 369

>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score = 95.3 bits (236), Expect = 3e-23
 Identities = 49/225 (21%), Positives = 82/225 (36%), Gaps = 20/225 (8%)

Query: 4   DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
           DYY IL V   A+ +++KK+Y++LA+K+HPD+NP   + AE KFK I+EAY++LSDP +R
Sbjct: 7   DYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERR 66

Query: 64  QIYDLYGPE-GLKASDFGTPSYHHPHDTKPCA-------------TRNNNNNNHRAGGAG 109
             YD  G +       +   +      +                  R  +  +  + G  
Sbjct: 67  AEYDKIGADNYFPGKSYRESAAFPIEGSLQLTGLYEEWRGKRNKTERKASLADLLSRGLS 126

Query: 110 PKPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKP-----ITVQEILKIDIKPGW 164
                  +            +       ++    +            + + LK  IK G 
Sbjct: 127 GLAAALSLFADEAALRSGSLRRRDLAANLADNFEEALAGVKKAVARLLGKALKSTIKAGA 186

Query: 165 KKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVN 209
            +G  +          G            K H  F  +G+D    
Sbjct: 187 LEGKALRLKGLLKSARGA-LGKARLKELSKRHPPFALEGDDKYPV 230

Length = 237

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score = 97.9 bits (244), Expect = 3e-23
 Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 6/82 (7%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY IL V R ATE+++KK+Y+RLA K+HPD NP  +++AE KFK I+EAY++LSDP+KR
Sbjct: 6  DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPG-DKEAEQKFKEINEAYEILSDPQKR 64

Query: 64 QIYDLYG-----PEGLKASDFG 80
            YD +G     P G     FG
Sbjct: 65 AQYDQFGHAAFDPGGFGQGGFG 86

Length = 386

>gnl|CDD|216569 pfam01556, DnaJ_C, DnaJ C terminal domain

 Score = 90.3 bits (225), Expect = 3e-23
 Identities = 31/80 (38%), Positives = 50/80 (62%)

Query: 205 DLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKG 264
           DL V   ISL EAL G ++ +  LDGR + + +    QPG ++ I  +GMPI+K  + +G
Sbjct: 1   DLYVTLPISLKEALLGGTVEVPTLDGRKVKIKIPAGTQPGDKLRIKGKGMPINKGGNGRG 60

Query: 265 NLIIKFDIMFPSRLTAEQKS 284
           +LI+  ++  P +L++EQK 
Sbjct: 61  DLIVTLNVKIPKKLSSEQKE 80

This family consists of the C terminal region form the DnaJ protein. Although the function of this region is unknown, it is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. Length = 81

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score = 97.1 bits (242), Expect = 4e-23
 Identities = 38/77 (49%), Positives = 55/77 (71%), Gaps = 1/77 (1%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY +L VSR A+ED++KK+Y++LA+++HPD+NP  N +AE KFK  +EAY+VL D  KR
Sbjct: 5  DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNP-DNPEAEQKFKEAAEAYEVLRDAEKR 63

Query: 64 QIYDLYGPEGLKASDFG 80
            YD +G  G+  +   
Sbjct: 64 ARYDRFGHAGVNGNGGF 80

Length = 373

>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain

 Score = 87.6 bits (218), Expect = 2e-22
 Identities = 32/56 (57%), Positives = 47/56 (83%), Gaps = 1/56 (1%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSD 59
          DYY+IL V   A+++++KK+Y++LA+K+HPDKNP  + +AE KFK I+EAY+VLSD
Sbjct: 1  DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPD-DPEAEEKFKEINEAYEVLSD 55

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score = 95.3 bits (237), Expect = 3e-22
 Identities = 50/136 (36%), Positives = 71/136 (52%), Gaps = 16/136 (11%)

Query: 5   YYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQ 64
            Y +L +S+  T  ++KK+Y++LA+K HPDK          KFK IS AY+VLSDP KR+
Sbjct: 30  LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKG-----GDPEKFKEISRAYEVLSDPEKRK 84

Query: 65  IYDLYGPEGLKASDFGTPSYHHPHDTKPCATRNNNNNNHRAGGAGPKPTPTPIETQLLCT 124
           IYD YG EGL+  +          D              + GG   K     I + L  T
Sbjct: 85  IYDEYGEEGLEGGEQPA----DASDLFDLIF----GGGRKPGG---KKRGEDIVSHLKVT 133

Query: 125 LEELYKGARKKMKISR 140
           LE++Y GA +K+ I++
Sbjct: 134 LEQIYNGAMRKLAINK 149

Length = 421

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score = 93.8 bits (234), Expect = 6e-22
 Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 5/136 (3%)

Query: 150 ITVQEILKIDIKPGWKKGTKITFPEKGNQ-EPGLPPADLIFVVEEKPHAVFQRDGNDLVV 208
           +  ++ + + I  G   G ++    KGN  E G P  DL  V+  KPH +F+RDGNDL +
Sbjct: 212 VKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYI 271

Query: 209 NHKISLLEALTGLSLNLTALDGR-NLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLI 267
              IS  +A+ G  + +  LDG   L +P     Q G+   +  +G+P     + +G+L+
Sbjct: 272 EVPISFTQAILGGEIEVPTLDGDVKLKIPAG--TQSGTVFRLKGKGVP-RLRGNGRGDLL 328

Query: 268 IKFDIMFPSRLTAEQK 283
           +   +  P  L+ EQK
Sbjct: 329 VTVKVETPKNLSKEQK 344

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional

 Score = 94.1 bits (234), Expect = 6e-22
 Identities = 36/67 (53%), Positives = 55/67 (82%), Gaps = 1/67 (1%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY +L + +GA++D++KK++++LA+K+HPDKN   N++AE KFK I+EAY VLSDP+K+
Sbjct: 5  DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKG-NKEAEEKFKEINEAYQVLSDPQKK 63

Query: 64 QIYDLYG 70
            YD +G
Sbjct: 64 AQYDQFG 70

Length = 380

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score = 91.8 bits (228), Expect = 4e-21
 Identities = 39/74 (52%), Positives = 56/74 (75%), Gaps = 1/74 (1%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY +L VS+ AT D++KK+Y++ A+++HPDKNP  +++AE KFK  +EAYDVLSDP KR
Sbjct: 6  DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPG-DKEAEEKFKEAAEAYDVLSDPDKR 64

Query: 64 QIYDLYGPEGLKAS 77
            YD +G  G+  +
Sbjct: 65 SRYDQFGHAGVGGA 78

Length = 386

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score = 91.6 bits (228), Expect = 5e-21
 Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 10/86 (11%)

Query: 1  MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPD--KNPATNQQAEAKFKLISEAYDVLS 58
          M  DYY IL VSR A +D+LK++Y+RLA K+HPD  K P     AE +FK I+ AY+VLS
Sbjct: 1  MAADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPG----AEDRFKEINRAYEVLS 56

Query: 59 DPRKRQIYDLYGPEGLK----ASDFG 80
          DP  R  YD +G  G+       D G
Sbjct: 57 DPETRARYDQFGEAGVSGAAGFPDMG 82

Length = 374

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score = 90.3 bits (224), Expect = 1e-20
 Identities = 43/87 (49%), Positives = 57/87 (65%), Gaps = 12/87 (13%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY IL +S+ A+ +D+KK+Y++LAMK+HPDKN   +  AE KFK ISEAY VLSD  KR
Sbjct: 6  DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPD--AEEKFKEISEAYAVLSDAEKR 63

Query: 64 QIYDLYGPEGL----------KASDFG 80
            YD +G  G+          + +DFG
Sbjct: 64 AQYDRFGHAGIDNQYSAEDIFRGADFG 90

Length = 377

>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional

 Score = 90.1 bits (224), Expect = 1e-20
 Identities = 34/70 (48%), Positives = 50/70 (71%), Gaps = 2/70 (2%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          +YY+ L VS+ A++D++KK+Y++L+ K+HPD N      AE K+K + EAY+ LSDP+KR
Sbjct: 5  EYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPG--AEEKYKEVQEAYETLSDPQKR 62

Query: 64 QIYDLYGPEG 73
            YD YG  G
Sbjct: 63 AAYDQYGAAG 72

Length = 380

>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional

 Score = 88.1 bits (218), Expect = 7e-20
 Identities = 39/82 (47%), Positives = 60/82 (73%), Gaps = 3/82 (3%)

Query: 5  YYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQ 64
          YY+IL VS+ A ++++K +Y++LA+K+HPDKN   N+++E KFK  +EAY++L DP+KRQ
Sbjct: 6  YYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKG-NKESEEKFKEATEAYEILRDPKKRQ 64

Query: 65 IYDLYGPEGLK--ASDFGTPSY 84
           YD +G  G+   A  FG  +Y
Sbjct: 65 AYDQFGKAGVNAGAGGFGQGAY 86

Length = 372

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score = 87.9 bits (218), Expect = 9e-20
 Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 11/86 (12%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY +L VS+ A++D++KK+Y++L+ K+HPD N      A+ KFK ISEAY+VLSD +KR
Sbjct: 5  DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEG--ADEKFKEISEAYEVLSDDQKR 62

Query: 64 QIYDLYGPE---------GLKASDFG 80
            YD +G           G    DFG
Sbjct: 63 AQYDQFGHAGPNQGFGGGGFGGGDFG 88

Length = 376

>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional

 Score = 87.8 bits (217), Expect = 9e-20
 Identities = 40/74 (54%), Positives = 59/74 (79%), Gaps = 1/74 (1%)

Query: 1  MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
          M + YY IL+V + + ++ +KKSY++LA+K+HPD+N A +++AE KFKLI+EAY VLSD 
Sbjct: 1  MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRN-AGDKEAEEKFKLINEAYGVLSDE 59

Query: 61 RKRQIYDLYGPEGL 74
          +KR +YD YG +GL
Sbjct: 60 KKRALYDRYGKKGL 73

Length = 369

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score = 87.2 bits (216), Expect = 2e-19
 Identities = 38/76 (50%), Positives = 54/76 (71%), Gaps = 5/76 (6%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY +L V + ATE ++KK+Y++LA ++HPD N   + +AE +FK ISEAYDVLSD +KR
Sbjct: 10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDAN-KGDAKAEERFKEISEAYDVLSDEKKR 68

Query: 64 QIYD----LYGPEGLK 75
          + YD    L+G  G +
Sbjct: 69 KEYDEARSLFGNGGFR 84

Length = 389

>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional

 Score = 86.8 bits (215), Expect = 2e-19
 Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 2/71 (2%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY +L V R A + ++KK+Y++LA K+HPD +    + AE KFK ISEAY VLSD  KR
Sbjct: 6  DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVS--EEEGAEEKFKEISEAYAVLSDDEKR 63

Query: 64 QIYDLYGPEGL 74
          Q YD +G  G+
Sbjct: 64 QRYDQFGHAGM 74

Length = 378

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score = 85.6 bits (212), Expect = 6e-19
 Identities = 33/64 (51%), Positives = 47/64 (73%), Gaps = 1/64 (1%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          D+Y  L VS  A+ +++KK+Y++LA + HPD NP  +  AE +FK +SEA+DVLSDP KR
Sbjct: 10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPG-DPAAEERFKAVSEAHDVLSDPAKR 68

Query: 64 QIYD 67
          + YD
Sbjct: 69 KEYD 72

Length = 392

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score = 85.2 bits (211), Expect = 8e-19
 Identities = 42/128 (32%), Positives = 73/128 (57%), Gaps = 2/128 (1%)

Query: 150 ITVQEILKIDIKPGWKKGTKITFPEKGNQ-EPGLPPADLIFVVEEKPHAVFQRDGNDLVV 208
           +  +E +K+ I PG   G+K+  P KG+    G PP DL  +V+ KPH +F+R G++L +
Sbjct: 220 VIKKETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYL 279

Query: 209 NHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLII 268
           +  I++ EA+ G  L +  LDG+   + +    + G ++ +P +GMP  K  S  G+L++
Sbjct: 280 DVNITVAEAVLGTELEVPLLDGKKEKVKIPPGTKEGDKIRVPGKGMPRLKG-SGYGDLVV 338

Query: 269 KFDIMFPS 276
           +  I  P 
Sbjct: 339 RVHIDVPK 346

Length = 382

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score = 82.6 bits (204), Expect = 5e-18
 Identities = 34/68 (50%), Positives = 48/68 (70%), Gaps = 2/68 (2%)

Query: 3  VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRK 62
          +DYY +L VSR A+ D++K +Y++LA+K+HPD+N    + A  KF  I+EAY VLSD  K
Sbjct: 2  MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK--EKGAAEKFAQINEAYAVLSDAEK 59

Query: 63 RQIYDLYG 70
          R  YD +G
Sbjct: 60 RAHYDRFG 67

Length = 371

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score = 81.8 bits (202), Expect = 6e-18
 Identities = 82/290 (28%), Positives = 125/290 (43%), Gaps = 32/290 (11%)

Query: 4   DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
           DYY I+ V        +K +Y+RLA K+HPD   +    AEA+FK ++EA++VLSD ++R
Sbjct: 5   DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDV--SKEPDAEARFKEVAEAWEVLSDEQRR 62

Query: 64  QIYDLY-----GPEGLKASDFGTPSYHHPHDTKPCAT----RNNNNNNHRAGGAGPKPTP 114
             YD        P+  +    G     +  D     +    ++   +  R    G     
Sbjct: 63  AEYDQLWQHRNDPQFNRQFQHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPAARGHD--- 119

Query: 115 TPIETQLLCTLEELYKGARKKMKISRVLP--DHFGKPITVQEI---LKIDIKPGWKKGTK 169
             IE ++   LEE       K  IS  LP  + FG     QEI   L + I  G   G +
Sbjct: 120 --IEIEVAVFLEETL--TEHKRTISYNLPVYNAFGMI--EQEIPKTLNVKIPAGVGNGQR 173

Query: 170 ITFPEKGNQ-EPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTAL 228
           I    +G   E G P  DL  V+   PH +F   G DL +   ++  EA  G  + +  L
Sbjct: 174 IRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTL 233

Query: 229 DGR-NLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSR 277
                LT+P     Q G  + +  +G+ +SK   + G+L     I+ P +
Sbjct: 234 KESILLTIPPGS--QAGQRLRVKGKGL-VSK--KQTGDLYAVLKIVMPPK 278

Length = 306

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score = 80.5 bits (199), Expect = 3e-17
 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 2/134 (1%)

Query: 156 LKIDIKPGWKKGTKITFPEKGNQEPGL-PPADLIFVVEEKPHAVFQRDGNDLVVNHKISL 214
           + + I  G   G +I    +G   PG  P  DL   V E+PH VF RDG+DL     + +
Sbjct: 214 ITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPM 273

Query: 215 LEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMF 274
           ++A  G ++ + A+      + +    QPGS + +   GMP  +    +G+L    +++ 
Sbjct: 274 VDAALGTTVTVEAILDGPSEITIPPGTQPGSVITLRGRGMPHLRS-GGRGDLHAHVEVVV 332

Query: 275 PSRLTAEQKSDLKR 288
           P+RL  E    L+ 
Sbjct: 333 PTRLDHEDIELLRE 346

Length = 378

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score = 79.3 bits (195), Expect = 8e-17
 Identities = 36/70 (51%), Positives = 54/70 (77%), Gaps = 1/70 (1%)

Query: 1  MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
          M  DYY IL +S+GA++D++KK+Y+++A+K+HPDKN   N++AE+ FK  +EAY+VL D 
Sbjct: 1  MKRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKN-KGNKEAESIFKEATEAYEVLIDD 59

Query: 61 RKRQIYDLYG 70
           KR  YD +G
Sbjct: 60 NKRAQYDRFG 69

Length = 365

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score = 78.9 bits (195), Expect = 1e-16
 Identities = 43/139 (30%), Positives = 77/139 (55%), Gaps = 4/139 (2%)

Query: 152 VQEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNH 210
           V + LKI+I  G   GT++    +G+    G PP DL   +  K    F+RDG +++   
Sbjct: 214 VTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEI 273

Query: 211 KISLLEALTGLSLNLTALDGR-NLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIK 269
           KIS L+A+ G +L +  +DG   LT+P     QP + + + N+G+P   +P  +G+ +I 
Sbjct: 274 KISYLQAILGDTLEVDTVDGPVELTIPAG--TQPNTVLTLENKGVPRLGNPVARGDHLIT 331

Query: 270 FDIMFPSRLTAEQKSDLKR 288
             +  P+R++ E++  L++
Sbjct: 332 VKVKIPTRISDEERELLEK 350

Length = 374

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 78.3 bits (192), Expect = 4e-16
 Identities = 35/75 (46%), Positives = 52/75 (69%), Gaps = 2/75 (2%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY +L + R A E ++KK++++LA K+HPD+N A +  A + F  I+EA DVLS+P+KR
Sbjct: 3  DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPD--AASIFAEINEANDVLSNPKKR 60

Query: 64 QIYDLYGPEGLKASD 78
            YD YG +G+   D
Sbjct: 61 ANYDKYGHDGVDRED 75

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score = 76.6 bits (188), Expect = 7e-16
 Identities = 41/84 (48%), Positives = 54/84 (64%), Gaps = 9/84 (10%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY +L V R A+ D++KK+Y++LA K+HPD N A +  AE KFK + EAYD LSDP+K+
Sbjct: 5  DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPD--AEDKFKEVKEAYDTLSDPQKK 62

Query: 64 QIYDLYGPE-------GLKASDFG 80
            YD +G         G  A DFG
Sbjct: 63 AHYDQFGHTDPNQGFGGGGAGDFG 86

Length = 371

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score = 75.8 bits (186), Expect = 1e-15
 Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 16/149 (10%)

Query: 1   MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           M  DYY IL VS+ A++ DLKK+Y +LA ++HPD   A +  AE KFK I+ AYDVL D 
Sbjct: 1   MSQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKD--AEKKFKEINAAYDVLKDE 58

Query: 61  RKRQIYDLYGPEGL-----KASDFGTPSYHHPHDTKPCATRNNNNNNHRAGGAGPKPTPT 115
           +KR  YD +G +       +        +H   +        +  ++   G    +PT +
Sbjct: 59  QKRAAYDRFGHDAFQNQQSRGGGGNHGGFHPDIND----IFGDFFSDFMGGSRRSRPTSS 114

Query: 116 PI-----ETQLLCTLEELYKGARKKMKIS 139
            +     +  L   LEE + G  K +  S
Sbjct: 115 KVRGSDLKYNLTINLEEAFHGIEKNISFS 143

Length = 372

>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional

 Score = 73.3 bits (180), Expect = 1e-14
 Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 6/148 (4%)

Query: 143 PDHFGKPITVQEI-LKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQ 200
           P  +G+ I   E+ +K+ +  G + G  +T   +GN  P G  P DLI V+EEKPH +F 
Sbjct: 223 PACYGEGIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFV 282

Query: 201 RDGNDLVVNHKISLLEALTGLSLNLTALDGR-NLTLPVTDIIQPGSEVVIPNEGMPISKD 259
           R+G+D++ N  +S  + + G  + +  LDG   LT+P     QP + + IP +G+   + 
Sbjct: 283 RNGDDVIYNLAVSYPDLVLGTKVEVPTLDGAVKLTIPAG--TQPETMLRIPGKGIGHLRG 340

Query: 260 PSKKGNLIIKFDIMFPSRLTAEQKSDLK 287
              +G+  ++ ++  P  ++ + K  LK
Sbjct: 341 SG-RGDQYVRVNVFVPKEVSHQDKELLK 367

Length = 397

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score = 72.1 bits (177), Expect = 2e-14
 Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 7/135 (5%)

Query: 156 LKIDIKPGWKKGTKITFPEKGNQEPGL---PPADLIFVVEEKPHAVFQRDGNDLVVNHKI 212
           +K++I  G   G  IT   +G  EPG+   P  DL  V++ KPH +F+R+G ++ +   I
Sbjct: 230 IKVNIPAGIDDGQMITL--RGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPI 287

Query: 213 SLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDI 272
           +  +A  G  + +  LDG+ +   + +  Q G++  +  +G+P  +    +G+ I+K  I
Sbjct: 288 TFTDAALGGEIEIPTLDGK-VKFTIPEGTQTGTKFRLRGKGIPHLRG-RGRGDQIVKVYI 345

Query: 273 MFPSRLTAEQKSDLK 287
             P +LT +QK  L+
Sbjct: 346 EVPKKLTEKQKELLR 360

Length = 386

>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional

 Score = 72.2 bits (177), Expect = 2e-14
 Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 3/134 (2%)

Query: 156 LKIDIKPGWKKGTKITFPEKGNQ-EPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISL 214
           + + I  G + G+++    +G   + G  P DL  V++ KPH +F+R+G +L     IS 
Sbjct: 221 ISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISF 280

Query: 215 LEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMF 274
           ++A  G ++++  +DG  + L +    Q G+   +   GMP S   S KGNL +K  ++ 
Sbjct: 281 VQAALGDTVDVPTIDG-PVELKIPAGTQSGTTFRLKGHGMP-SLRWSGKGNLYVKVKVVV 338

Query: 275 PSRLTAEQKSDLKR 288
           P +L+ +QK  L+ 
Sbjct: 339 PKKLSPKQKELLRE 352

Length = 378

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score = 72.1 bits (177), Expect = 3e-14
 Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 2/131 (1%)

Query: 158 IDIKPGWKKGTKITFPEKGNQE-PGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLE 216
           + I  G + GT +     GN    G P  DL  +V  +P   F+R G+DL+ +  I  L+
Sbjct: 229 VKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQ 288

Query: 217 ALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPS 276
           A+ G ++ +   +G    L +    QP +   +  +G+P +    ++G+LI+   +  P 
Sbjct: 289 AILGTTVEVPLPEGGTTMLKIPPGTQPETVFRLKGKGLP-NMRYGRRGDLIVNVHVEIPK 347

Query: 277 RLTAEQKSDLK 287
           RL+ E++  LK
Sbjct: 348 RLSREERKLLK 358

Length = 369

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score = 72.1 bits (177), Expect = 3e-14
 Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 7/135 (5%)

Query: 156 LKIDIKPGWKKGTKITFPEKGNQEPGL---PPADLIFVVEEKPHAVFQRDGNDLVVNHKI 212
           LK+ I  G   G+++    +G  EPG+   PP DL  V+  +   +FQR G DLVV  +I
Sbjct: 215 LKVRIPAGVDTGSRLRL--RGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEI 272

Query: 213 SLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDI 272
           S ++A  G  + +  LD   +TL +    Q G    +  +G+P     S+KG+L+++  +
Sbjct: 273 SFVQAALGDRIEVPTLDD-PVTLDIPKGTQSGEVFRLRGKGLPYLGS-SQKGDLLVEVSV 330

Query: 273 MFPSRLTAEQKSDLK 287
           + P++LT  Q+  L+
Sbjct: 331 VTPTKLTKRQEELLR 345

Length = 373

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score = 70.6 bits (173), Expect = 9e-14
 Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 3/135 (2%)

Query: 153 QEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHK 211
           +E++ + I  G  +G +++   KGN    G    DL+ V+EE+PH    RD NDL+ N  
Sbjct: 226 EEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLL 285

Query: 212 ISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFD 271
           +S+  A  G ++ +  +DG+   + +    QPG  + + N+G+P S +    G+L++   
Sbjct: 286 LSVPTAALGGAVEVPTIDGK-AKVKIEAGTQPGKVLRLRNKGLP-SVNGYGTGDLLVNVS 343

Query: 272 IMFPSRLTAEQKSDL 286
           +  P  L+ E+K  L
Sbjct: 344 VYIPETLSKEEKQTL 358

Length = 386

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score = 67.7 bits (165), Expect = 8e-13
 Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 2/74 (2%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY +L VS+ A+E +++++Y++LA ++HPD N + +  A  K   I+EA DVL D  KR
Sbjct: 5  DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPD--AHDKMVEINEAADVLLDKDKR 62

Query: 64 QIYDLYGPEGLKAS 77
          + YD +G      S
Sbjct: 63 KQYDQFGHAAFDGS 76

Length = 372

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score = 65.2 bits (159), Expect = 5e-12
 Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 3/139 (2%)

Query: 150 ITVQEILKIDIKPGWKKGTKITFPEKGNQ-EPGLPPADLIFVVEEKPHAVFQRDGNDLVV 208
           + V + +++ I  G   G+++    +G     G PP DL   +  +PH  F+RDGND+  
Sbjct: 209 VRVSKTVQVKIPAGVDTGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHC 268

Query: 209 NHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLII 268
              IS ++A  G  + +  L+G    L +    QPG       +G+P S     +G+ II
Sbjct: 269 KVPISFVQAALGAQIEVPTLEGER-ELKIPKGTQPGDIFRFKGKGIP-SLRGGGRGDQII 326

Query: 269 KFDIMFPSRLTAEQKSDLK 287
           + ++  P+RLT +Q+  L 
Sbjct: 327 EVEVKVPTRLTKKQEELLT 345

Length = 366

>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

 Score = 65.8 bits (160), Expect = 5e-12
 Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 5/77 (6%)

Query: 2   GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDK----NPATNQQAEAKFKLISEAYDVL 57
           G D Y IL + +  +E D+KK Y+ L+MK+HPDK          + E K+K I++AY +L
Sbjct: 97  GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLL 156

Query: 58  SDPRKRQIYDLYG-PEG 73
           +D ++R+ Y  YG P+ 
Sbjct: 157 TDKKRRENYLNYGTPDS 173

Length = 610

>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional

 Score = 65.0 bits (158), Expect = 6e-12
 Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 4/130 (3%)

Query: 156 LKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISL 214
           + I I PG + G+++    +G   P G P  DL  V   K H +F+R GNDL++  KISL
Sbjct: 221 INIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISL 280

Query: 215 LEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSK-KGNLIIKFDIM 273
            +A+ G  + +  +DG+   + + +  + G    +   GMP      K   ++I+K +I 
Sbjct: 281 AQAILGAEIEVPTIDGKKAKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVIVKIEI- 339

Query: 274 FPSRLTAEQK 283
            P ++T  Q+
Sbjct: 340 -PKKITRRQR 348

Length = 372

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score = 63.2 bits (155), Expect = 2e-11
 Identities = 41/132 (31%), Positives = 57/132 (43%), Gaps = 9/132 (6%)

Query: 156 LKIDIKPGWKKGTKITFPEKGNQEPGL---PPADLIFVVEEKPHAVFQRDGNDLVVNHKI 212
           L + I  G   G +I    +G  E G    P  DL   +  K H +F+RDGNDL     I
Sbjct: 213 LSVKIPAGVDTGDRIRLSGEG--EAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPI 270

Query: 213 SLLEALTGLSLNLTALDGR-NLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFD 271
           S   A  G  + +  LDGR  L +P     Q G    +  +G+  S     +G+L  +  
Sbjct: 271 SFTTAALGGEIEVPTLDGRVKLKIPEG--TQTGKLFRLRGKGVK-SVRSGARGDLYCQVV 327

Query: 272 IMFPSRLTAEQK 283
           +  P  LT  QK
Sbjct: 328 VETPVNLTKRQK 339

Length = 371

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score = 62.2 bits (151), Expect = 5e-11
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 3/135 (2%)

Query: 156 LKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISL 214
           + + I  G   G ++     G+    G P  DL   ++ +PH VF+R G+DL++   I  
Sbjct: 229 VHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGF 288

Query: 215 LEALTGLSLNL-TALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIM 273
           ++A  G+   + T L      L + + IQ G+ + +  +G P +     +G+L+++  + 
Sbjct: 289 VDAALGMKKEIPTLLKEGTCRLTIPEGIQSGTILKVRGQGFP-NVHGKGRGDLLVRISVE 347

Query: 274 FPSRLTAEQKSDLKR 288
            P  L+ EQK  L++
Sbjct: 348 TPQNLSEEQKELLRQ 362

Length = 391

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score = 60.8 bits (147), Expect = 1e-10
 Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 2/131 (1%)

Query: 150 ITVQEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVV 208
           +  +E +++ I  G     +I    KG+  P      DL   +  KPH +F+R+G DL  
Sbjct: 211 LKKKETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYA 270

Query: 209 NHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLII 268
              IS  +A  G  + +  +  + + + +    +   +++I NEGMPI     K GNLI+
Sbjct: 271 TLPISFTQAALGKEIKIQTIASKKIKIKIPKGTENDEQIIIKNEGMPILHT-EKFGNLIL 329

Query: 269 KFDIMFPSRLT 279
              I  P  L 
Sbjct: 330 IIKIKTPKNLN 340

Length = 365

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score = 58.7 bits (142), Expect = 7e-10
 Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 6/143 (4%)

Query: 152 VQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHK 211
             E +K+ +  G  +G +I     GN+ PG    DL   +E +PH   +R+   L+   +
Sbjct: 211 KAETVKVKLPRGIDEGYRIRVAGMGNEGPG-GNGDLYVHIEMEPHPELRREQEHLIYEAR 269

Query: 212 ISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFD 271
           I   +A  G  + +  LDG    + V    Q G    +  +GMP     +  G+LI++++
Sbjct: 270 IGFAKAALGGQITVPTLDGPQ-VIEVKPGTQHGDLHRLRGQGMP-RLQGAGTGDLIVEYE 327

Query: 272 IMFPSRLTAEQKSDLK---RALG 291
           I  P +L+ E +  L+   RA+G
Sbjct: 328 IAVPKQLSPEAREALEAYARAVG 350

Length = 371

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score = 58.8 bits (142), Expect = 7e-10
 Identities = 37/139 (26%), Positives = 77/139 (55%), Gaps = 5/139 (3%)

Query: 153 QEILKIDIKPGWKKGTKITFPEKGNQ--EPGLPPADLIFVVEEKPHAVFQR-DGNDLVVN 209
           ++ ++++I  G +   +I   +KG+     G+   DLI  +  K   VF+  + ND+++ 
Sbjct: 221 RKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVN-GDLIIDIYLKESKVFEIINNNDILMT 279

Query: 210 HKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIK 269
           + IS L+A+ G  + +  LDG ++   +   I     ++I N+G+  S +  K+G+LIIK
Sbjct: 280 YNISYLDAILGNEIIIKTLDG-DIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIK 338

Query: 270 FDIMFPSRLTAEQKSDLKR 288
            +I+ P  L+ ++K  +++
Sbjct: 339 VNIVVPKNLSKKEKELIEQ 357

Length = 372

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score = 55.5 bits (134), Expect = 8e-09
 Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 14/144 (9%)

Query: 148 KPITVQEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDL 206
           + I V+      I PG + G +I    +G     G P  DL   V  +P  VF RDG+DL
Sbjct: 242 RTINVR------IPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDL 295

Query: 207 VVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSE--VVIPNEGMPISKDPSKKG 264
            V   +S  E   G +L++  LDG     PV   +  G+    ++   G  + K     G
Sbjct: 296 TVTVPVSFTELALGSTLSVPTLDG-----PVGVKVPAGTADGRILRVRGRGVPKRSGGAG 350

Query: 265 NLIIKFDIMFPSRLTAEQKSDLKR 288
           +L++   +  P  L       L+ 
Sbjct: 351 DLLVTVKVAVPPNLDGAAAEALEA 374

Length = 392

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score = 55.2 bits (133), Expect = 1e-08
 Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 3/133 (2%)

Query: 156 LKIDIKPGWKKGTKITFPEKGNQ-EPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISL 214
           + +++  G   G ++    +G    PG P  DL  V+  K H  F+R G+D++    IS 
Sbjct: 216 ITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISF 275

Query: 215 LEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMF 274
            +A  G  + +  L G  + + +    Q  S   + ++GMP       KG+ ++K  +  
Sbjct: 276 TQAALGADIMVPTLYG-KVKMNIPPGTQTHSVFRLKDKGMP-RLHGHGKGDQLVKVIVKT 333

Query: 275 PSRLTAEQKSDLK 287
           P++LT EQK  L+
Sbjct: 334 PTKLTQEQKELLR 346

Length = 377

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score = 53.7 bits (129), Expect = 3e-08
 Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 3/134 (2%)

Query: 156 LKIDIKPGWKKGTKITFPEKGNQ-EPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISL 214
           +++ I  G   G +I    KG   E G P  DL  VV   PH VF R G++L V   ++ 
Sbjct: 237 MQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTF 296

Query: 215 LEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMF 274
            EA  G  + +  L G  +T+ +      G  + +  +G    KD + +G+L++  ++  
Sbjct: 297 PEAALGAEVRVPTLGGPPVTVKLPPGTPNGRVLRVRGKGAV-RKDGT-RGDLLVTVEVAV 354

Query: 275 PSRLTAEQKSDLKR 288
           P  L+ + +  L+ 
Sbjct: 355 PKDLSGKAREALEA 368

Length = 389

>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional

 Score = 54.4 bits (130), Expect = 3e-08
 Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 2/82 (2%)

Query: 5   YYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQ 64
           +Y+IL V   A   ++ + Y +LA  ++P K   +  +   KFK I+EAY +L D  K++
Sbjct: 575 FYDILGVGVNADMKEISERYFKLAENYYPPKR--SGNEGFHKFKKINEAYQILGDIDKKK 632

Query: 65  IYDLYGPEGLKASDFGTPSYHH 86
           +Y+ +G +G+K  +F  PS  +
Sbjct: 633 MYNKFGYDGIKGVNFIHPSIFY 654

Length = 1136

>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional

 Score = 52.5 bits (126), Expect = 8e-08
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 7/135 (5%)

Query: 156 LKIDIKPGWKKGTKITFPEKGNQEPGL---PPADLIFVVEEKPHAVFQRDGNDLVVNHKI 212
           +K+++  G   G  I  P +G  E G    P  DL   +   PH  F+R G D+ ++  I
Sbjct: 223 IKVNVPAGVDTGNVI--PLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHI 280

Query: 213 SLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDI 272
           S  +A  G  + +  +DG  +   V    QPG+   +  +G+P   + + +GN  +   +
Sbjct: 281 SFAKAALGTEIKVPTVDG-EVKYEVPAGTQPGTVFRLKGKGVP-RVNSTGRGNQYVTVIV 338

Query: 273 MFPSRLTAEQKSDLK 287
             P +L ++QK  L 
Sbjct: 339 DIPKKLNSKQKEALT 353

Length = 380

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score = 50.9 bits (122), Expect = 3e-07
 Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 9/142 (6%)

Query: 151 TVQEILKIDIK--PGWKKGTKITFPEKGNQEPGL---PPADLIFVVEEKPHAVFQRDGND 205
            V++  KI++K   G   G +I    +G  EPG+   P  DL  V   +PH  F+RDG+D
Sbjct: 211 KVRKRKKINVKIPAGVDNGQQIRVSGEG--EPGVNGGPAGDLYVVFRVRPHEFFERDGDD 268

Query: 206 LVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGN 265
           +     ++  +A  G  + +  L G  + L +    Q G++  +  +G+P +     +G+
Sbjct: 269 IYCEMPLTFAQAALGDEIEVPTLHG-KVKLKIPAGTQTGTQFRLKGKGVP-NVRGYGQGD 326

Query: 266 LIIKFDIMFPSRLTAEQKSDLK 287
             +   ++ P++LT  QK  L+
Sbjct: 327 QYVVVRVVTPTKLTDRQKELLR 348

Length = 376

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score = 48.8 bits (116), Expect = 1e-06
 Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 5/135 (3%)

Query: 150 ITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVN 209
           + V E + + I  G     ++    KG    G    DL  V+        QR  +DL V+
Sbjct: 217 VVVNEDISVKIPKGATDNLRLRVKGKGQSYGGRT-GDLYVVLRVNNDPNIQRINDDLYVD 275

Query: 210 HKISLLEALTGLSLNLTALDGR-NLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLII 268
            KI+  +A  G  + +     + NL +P     QPG  + I   GMP   +    G+L++
Sbjct: 276 QKINFPQAALGGEIEIKLFREKYNLKIPEG--TQPGEVLKIKGAGMP-HLNGHGSGDLLV 332

Query: 269 KFDIMFPSRLTAEQK 283
           + ++  P RLT++QK
Sbjct: 333 RINVEVPKRLTSKQK 347

Length = 365

>gnl|CDD|227594 COG5269, ZUO1, Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

 Score = 48.9 bits (116), Expect = 1e-06
 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 3   VDYYNILKVSR---GATEDDLKKSYKRLAMKWHPDKNPAT-NQQAEAKFKLISEAYDVLS 58
           VD Y +L +S+    A    + K++K+   K+HPDK  A  N+  +  FKLI +A +VL 
Sbjct: 43  VDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLG 102

Query: 59  DPRKRQIYD 67
           D + R  YD
Sbjct: 103 DRKLRLQYD 111

Length = 379

>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional

 Score = 43.9 bits (103), Expect = 5e-05
 Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 1/129 (0%)

Query: 160 IKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALT 219
           I  G     ++    KGN+       DL      K    F+R+G DL +   +       
Sbjct: 214 IPEGIDDQNRMVLKNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIAL 273

Query: 220 GLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLT 279
           G ++ + +L G  L L +    +        NEG+    + S +G+LI++  +++P  L 
Sbjct: 274 GHTIKVPSLKGDELELKIPRNARDRQTFAFRNEGVK-HPESSYRGSLIVELQVIYPKSLN 332

Query: 280 AEQKSDLKR 288
            EQ+  L++
Sbjct: 333 KEQQELLEK 341

Length = 369

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score = 44.2 bits (104), Expect = 5e-05
 Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 3/113 (2%)

Query: 181 GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDI 240
           G PP DL  V   KPH  F+RDG+D+     ++  +   G  + +  L+G+ + L +   
Sbjct: 239 GGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGK-VKLKIPAG 297

Query: 241 IQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGGV 293
            Q G+   +  +G+P +     +G+  ++  ++ P  LT E++ +L R   G+
Sbjct: 298 TQTGTSFRLRGKGVP-NVHGRGQGDQHVQVRVVTPKNLT-EKEKELMREFAGM 348

Length = 371

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score = 43.8 bits (103), Expect = 6e-05
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 8/139 (5%)

Query: 153 QEILKIDIKPGWKKGTKITFPEKGNQEPGL---PPADLIFVVEEKPHAVFQRDGNDLVVN 209
           Q  L ++I  G + GT+I    +G  E G+      DL   +  KPH +++ DG +L   
Sbjct: 213 QRNLSVNIPAGVENGTRIRHTGEG--EAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCK 270

Query: 210 HKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSK-KGNLII 268
             IS + A  G  + +  ++G  + L +    Q G ++ + ++GM  SK  S  +G+++ 
Sbjct: 271 LPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGM--SKMRSTIRGDMLT 328

Query: 269 KFDIMFPSRLTAEQKSDLK 287
              +  P  L+  Q+  L+
Sbjct: 329 HIHVEVPKNLSKRQRELLE 347

Length = 372

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	295
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	100.0
PRK14288	369	chaperone protein DnaJ; Provisional	100.0
PRK14296	372	chaperone protein DnaJ; Provisional	100.0
PTZ00037	421	DnaJ_C chaperone protein; Provisional	100.0
PRK14286	372	chaperone protein DnaJ; Provisional	100.0
PRK14278	378	chaperone protein DnaJ; Provisional	100.0
PRK14279	392	chaperone protein DnaJ; Provisional	100.0
PRK14295	389	chaperone protein DnaJ; Provisional	100.0
PRK14298	377	chaperone protein DnaJ; Provisional	100.0
PRK14285	365	chaperone protein DnaJ; Provisional	100.0
PRK14282	369	chaperone protein DnaJ; Provisional	100.0
PRK14277	386	chaperone protein DnaJ; Provisional	100.0
PRK14287	371	chaperone protein DnaJ; Provisional	100.0
PRK14281	397	chaperone protein DnaJ; Provisional	100.0
PRK14276	380	chaperone protein DnaJ; Provisional	100.0
PRK14280	376	chaperone protein DnaJ; Provisional	100.0
PRK14297	380	chaperone protein DnaJ; Provisional	100.0
PRK14284	391	chaperone protein DnaJ; Provisional	100.0
PRK14301	373	chaperone protein DnaJ; Provisional	100.0
PRK14294	366	chaperone protein DnaJ; Provisional	100.0
PRK14300	372	chaperone protein DnaJ; Provisional	100.0
PRK14291	382	chaperone protein DnaJ; Provisional	100.0
PRK14299	291	chaperone protein DnaJ; Provisional	100.0
PRK14283	378	chaperone protein DnaJ; Provisional	100.0
PRK14290	365	chaperone protein DnaJ; Provisional	100.0
PRK10767	371	chaperone protein DnaJ; Provisional	100.0
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	100.0
PRK10266	306	curved DNA-binding protein CbpA; Provisional	100.0
PRK14293	374	chaperone protein DnaJ; Provisional	100.0
PRK14289	386	chaperone protein DnaJ; Provisional	100.0
PRK14292	371	chaperone protein DnaJ; Provisional	100.0
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	100.0
KOG0713	336	consensus Molecular chaperone (DnaJ superfamily) [	100.0
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	100.0
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	99.96
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	99.95
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	99.89
KOG0716	279	consensus Molecular chaperone (DnaJ superfamily) [	99.82
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	99.81
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	99.8
KOG0718	546	consensus Molecular chaperone (DnaJ superfamily) [	99.8
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	99.77
KOG0691	296	consensus Molecular chaperone (DnaJ superfamily) [	99.76
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	99.75
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	99.73
KOG0719	264	consensus Molecular chaperone (DnaJ superfamily) [	99.72
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	99.69
KOG0721	230	consensus Molecular chaperone (DnaJ superfamily) [	99.66
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	99.66
PHA03102	153	Small T antigen; Reviewed	99.66
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	99.66
PRK01356	166	hscB co-chaperone HscB; Provisional	99.54
PRK05014	171	hscB co-chaperone HscB; Provisional	99.54
PRK03578	176	hscB co-chaperone HscB; Provisional	99.46
KOG0722	329	consensus Molecular chaperone (DnaJ superfamily) [	99.46
PRK00294	173	hscB co-chaperone HscB; Provisional	99.45
KOG0550	486	consensus Molecular chaperone (DnaJ superfamily) [	99.44
PTZ00100	116	DnaJ chaperone protein; Provisional	99.38
KOG0720	490	consensus Molecular chaperone (DnaJ superfamily) [	99.36
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	99.29
PHA02624	647	large T antigen; Provisional	99.28
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	99.21
PRK01773	173	hscB co-chaperone HscB; Provisional	99.17
PRK14299	291	chaperone protein DnaJ; Provisional	99.08
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	99.04
PRK14282	369	chaperone protein DnaJ; Provisional	99.03
PF01556	81	CTDII: DnaJ C terminal domain; InterPro: IPR002939	98.99
KOG1150	250	consensus Predicted molecular chaperone (DnaJ supe	98.98
PRK14290	365	chaperone protein DnaJ; Provisional	98.92
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	98.9
PRK14294	366	chaperone protein DnaJ; Provisional	98.9
PRK10266	306	curved DNA-binding protein CbpA; Provisional	98.89
PRK14285	365	chaperone protein DnaJ; Provisional	98.88
PRK14289	386	chaperone protein DnaJ; Provisional	98.82
PRK10767	371	chaperone protein DnaJ; Provisional	98.82
PRK14284	391	chaperone protein DnaJ; Provisional	98.79
PRK14298	377	chaperone protein DnaJ; Provisional	98.78
PRK14300	372	chaperone protein DnaJ; Provisional	98.78
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	98.76
PRK14279	392	chaperone protein DnaJ; Provisional	98.75
PRK14287	371	chaperone protein DnaJ; Provisional	98.74
PRK14301	373	chaperone protein DnaJ; Provisional	98.73
PRK14295	389	chaperone protein DnaJ; Provisional	98.71
PRK14291	382	chaperone protein DnaJ; Provisional	98.7
PRK14288	369	chaperone protein DnaJ; Provisional	98.7
PRK14293	374	chaperone protein DnaJ; Provisional	98.68
PRK14276	380	chaperone protein DnaJ; Provisional	98.63
PRK14292	371	chaperone protein DnaJ; Provisional	98.6
PRK14280	376	chaperone protein DnaJ; Provisional	98.58
PRK14286	372	chaperone protein DnaJ; Provisional	98.57
PRK14281	397	chaperone protein DnaJ; Provisional	98.57
PRK14283	378	chaperone protein DnaJ; Provisional	98.57
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	98.54
PRK14297	380	chaperone protein DnaJ; Provisional	98.54
PRK14278	378	chaperone protein DnaJ; Provisional	98.51
PRK14277	386	chaperone protein DnaJ; Provisional	98.46
PTZ00037	421	DnaJ_C chaperone protein; Provisional	98.43
PRK14296	372	chaperone protein DnaJ; Provisional	98.42
KOG0568	342	consensus Molecular chaperone (DnaJ superfamily) [	98.4
KOG1789	2235	consensus Endocytosis protein RME-8, contains DnaJ	98.33
KOG0723	112	consensus Molecular chaperone (DnaJ superfamily) [	98.13
KOG3192	168	consensus Mitochondrial J-type chaperone [Posttran	97.12
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	96.89
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	96.49
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	95.75
KOG0431	453	consensus Auxilin-like protein and related protein	95.12
PF03656	127	Pam16: Pam16; InterPro: IPR005341 The Pam16 protei	93.51
PF13446	62	RPT: A repeated domain in UCH-protein	88.69
PF11833	194	DUF3353: Protein of unknown function (DUF3353); In	86.58
KOG0724	335	consensus Zuotin and related molecular chaperones	86.52

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.2e-75  Score=536.97  Aligned_cols=283  Identities=34%  Similarity=0.578  Sum_probs=244.6

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCC
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFG   80 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g   80 (295)
                      |.+|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||||||||+||++||+||+.+++.++++
T Consensus         2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~-~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~g   80 (371)
T COG0484           2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGD-KEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFG   80 (371)
T ss_pred             CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcC
Confidence            679999999999999999999999999999999999953 6899999999999999999999999999999999855544


Q ss_pred             CCCC--CCCCCCCccccCCCCCCCCCCC-----CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----CC---
Q 022539           81 TPSY--HHPHDTKPCATRNNNNNNHRAG-----GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----HF---  146 (295)
Q Consensus        81 ~~~~--~~~~~~~~f~~~~~~~~~f~~~-----~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g~---  146 (295)
                      +.+|  |.....+.|+.      .|+++     .++.++++.|+.+.|+|||+||++|++++|.+.+.+.|    |+   
T Consensus        81 g~g~~~fgg~~~DIF~~------~FgGg~~~~~~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~GsGak  154 (371)
T COG0484          81 GFGFGGFGGDFGDIFED------FFGGGGGGRRRPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAK  154 (371)
T ss_pred             CCCcCCCCCCHHHHHHH------hhcCCCcccCCCCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCCCCCC
Confidence            3221  11100012221      12211     12456789999999999999999999999999887542    11   


Q ss_pred             --------------C-------------------------------------cEEEEEEEEEEEeCCCCcCCCeEecCCC
Q 022539          147 --------------G-------------------------------------KPITVQEILKIDIKPGWKKGTKITFPEK  175 (295)
Q Consensus       147 --------------G-------------------------------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~  175 (295)
                                    |                                     ..+.+.++++|+||+|+.+|++|+++|+
T Consensus       155 ~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaGv~~g~~ir~~g~  234 (371)
T COG0484         155 PGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLSGE  234 (371)
T ss_pred             CCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeECCCCCCCCCCCCeEeeeeEEEEECCCCCccCCEEEEecC
Confidence                          1                                     0577888999999999999999999999


Q ss_pred             CCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCc
Q 022539          176 GNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGM  254 (295)
Q Consensus       176 G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~  254 (295)
                      |+++. ++++|||||+|.|++|+.|.|+|+||+++++|++.+|++|+++.|+|++|+ ++|+||+++++|+++||+|+||
T Consensus       235 G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g~-~~l~ip~Gtq~G~~~rl~gkG~  313 (371)
T COG0484         235 GEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDGR-VKLKIPAGTQTGEVFRLRGKGM  313 (371)
T ss_pred             cccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCCC-EEEecCCCCccCcEEEEcCCCc
Confidence            99986 777899999999999999999999999999999999999999999999998 9999999999999999999999


Q ss_pred             CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhCC
Q 022539          255 PISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG  292 (295)
Q Consensus       255 p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~~  292 (295)
                      |... +..+|||||+++|++|++||.+|+++|+++...
T Consensus       314 p~~~-~~~~GDl~v~v~v~~P~~ls~~q~~lL~~~~~~  350 (371)
T COG0484         314 PKLR-SGGRGDLYVRVKVETPKNLSDEQKELLEEFAKS  350 (371)
T ss_pred             cccC-CCCcCCEEEEEEEEcCCCCCHHHHHHHHHHHHh
Confidence            9765 356799999999999999999999999999863

>PRK14288 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6.8e-70  Score=510.32  Aligned_cols=282  Identities=28%  Similarity=0.460  Sum_probs=239.4

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCC
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFG   80 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g   80 (295)
                      |+.|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+|||||.+|++||+||+++++.++.+
T Consensus         1 ~~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~-~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~~~   79 (369)
T PRK14288          1 MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGD-KEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGAS   79 (369)
T ss_pred             CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-cHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCCCC
Confidence            889999999999999999999999999999999999854 4689999999999999999999999999999887632211


Q ss_pred             CCCCCCCC--CC-CccccCCCCCCCCCCC----CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----CC---
Q 022539           81 TPSYHHPH--DT-KPCATRNNNNNNHRAG----GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----HF---  146 (295)
Q Consensus        81 ~~~~~~~~--~~-~~f~~~~~~~~~f~~~----~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g~---  146 (295)
                      +.+ |++.  +. +.|+.      .|+++    ....+++++|+.+.|.|||+|+|+|+++++.+.|.+.|    |+   
T Consensus        80 ~~~-~~~~f~~~~~~F~~------~fg~g~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~  152 (369)
T PRK14288         80 QSD-FSDFFEDLGSFFED------AFGFGARGSKRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAK  152 (369)
T ss_pred             ccc-cccchhhHHHHHHh------hcCCCCcccCcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCcccC
Confidence            112 2110  00 11221      12211    11224578999999999999999999999999876321    11   


Q ss_pred             -----------------------------------C-------------cEEEEEEEEEEEeCCCCcCCCeEecCCCCCC
Q 022539          147 -----------------------------------G-------------KPITVQEILKIDIKPGWKKGTKITFPEKGNQ  178 (295)
Q Consensus       147 -----------------------------------G-------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~  178 (295)
                                                         |             .++.+.++++|.||||+++|++|+|+|+|++
T Consensus       153 ~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G~~  232 (369)
T PRK14288        153 DKALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNE  232 (369)
T ss_pred             CCCCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEccccCccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCccC
Confidence                                               1             1456778999999999999999999999999


Q ss_pred             CCCCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCC
Q 022539          179 EPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISK  258 (295)
Q Consensus       179 ~~~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~  258 (295)
                      .+++.+|||+|+|++++|+.|+|+|+||+++++|||.|||+|+++.|+||||+.++|+||+++++|++++|+|+|||..+
T Consensus       233 ~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~i~g~G~p~~~  312 (369)
T PRK14288        233 YEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFAFRNEGVKHPE  312 (369)
T ss_pred             CCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEEEcCCCCCCCC
Confidence            88888999999999999999999999999999999999999999999999998899999999999999999999999765


Q ss_pred             CCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          259 DPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       259 ~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                       +..+|||||+|+|.+|+.|+++|+++|+++++
T Consensus       313 -~~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~  344 (369)
T PRK14288        313 -SSYRGSLIVELQVIYPKSLNKEQQELLEKLHA  344 (369)
T ss_pred             -CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence             34689999999999999999999999999986

>PRK14296 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.6e-68  Score=501.19  Aligned_cols=289  Identities=26%  Similarity=0.421  Sum_probs=235.9

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc-CC
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS-DF   79 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~-~~   79 (295)
                      -.+|||+||||+++||.+|||+|||+||++||||+|++  +.|+++|++|++||+|||||.+|+.||+||+++++.+ ++
T Consensus         2 ~~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~--~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~~~   79 (372)
T PRK14296          2 KKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS--PDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGF   79 (372)
T ss_pred             CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--chHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCCCc
Confidence            03799999999999999999999999999999999975  4689999999999999999999999999999877632 11


Q ss_pred             CC--CCC---CCCCCCCccccCCCCC-CCCCCCC--CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC-------
Q 022539           80 GT--PSY---HHPHDTKPCATRNNNN-NNHRAGG--AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD-------  144 (295)
Q Consensus        80 g~--~~~---~~~~~~~~f~~~~~~~-~~f~~~~--~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~-------  144 (295)
                      ++  ++|   |+....+.|..+..-| +.|++++  ...+.+++|+++.|.|||+|+|+|+++++.+.+.+.|       
T Consensus        80 ~~~~~~~~~~~~~~~~~g~~~f~d~f~~~fggg~~~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G~G  159 (372)
T PRK14296         80 SSNFGDFEDLFSNMGSSGFSSFTNIFSDFFGSNKSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSG  159 (372)
T ss_pred             CcCCCccccccccccccccccchhhhhhhcCCCccCCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCCCc
Confidence            11  111   1100000011000001 1233221  1334578999999999999999999999999765321       


Q ss_pred             --------------CCCc---------------------------------------EEEEEEEEEEEeCCCCcCCCeEe
Q 022539          145 --------------HFGK---------------------------------------PITVQEILKIDIKPGWKKGTKIT  171 (295)
Q Consensus       145 --------------g~G~---------------------------------------~~~~~~~l~V~Ip~G~~~G~~i~  171 (295)
                                    |+|.                                       ++.+.++++|.||||+++|++|+
T Consensus       160 ~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~  239 (372)
T PRK14296        160 AESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIK  239 (372)
T ss_pred             cCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeecccccCCCCceEEEEEEEEEEEECCCCCCCCEEE
Confidence                          1111                                       24556799999999999999999


Q ss_pred             cCCCCCCC-CCCCCccEEEEEEEeCCcceeec-CCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEE
Q 022539          172 FPEKGNQE-PGLPPADLIFVVEEKPHAVFQRD-GNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVI  249 (295)
Q Consensus       172 ~~g~G~~~-~~~~~GDliv~i~v~~h~~f~r~-g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl  249 (295)
                      |+|+|++. +++.+|||+|+|+++||+.|+|+ |+||+++++|||++||+|+++.|+||||+ ++|+||+++++|++++|
T Consensus       240 ~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~t~~g~~~ri  318 (372)
T PRK14296        240 LSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDGD-IKYKLPKSINSNELIII  318 (372)
T ss_pred             EeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCCC-EEEEECCccCCCcEEEE
Confidence            99999987 47789999999999999999995 89999999999999999999999999998 99999999999999999


Q ss_pred             cCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhCC
Q 022539          250 PNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG  292 (295)
Q Consensus       250 ~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~~  292 (295)
                      +|+|||...+++.+|||||+|+|.||+.||++|+++|++++..
T Consensus       319 ~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~l~~~  361 (372)
T PRK14296        319 NNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQIYEQ  361 (372)
T ss_pred             cCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            9999996544567899999999999999999999999999853

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=100.00  E-value=2.7e-67  Score=497.75  Aligned_cols=274  Identities=40%  Similarity=0.673  Sum_probs=234.0

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCCC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGT   81 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g~   81 (295)
                      .+|||+||||+++||.+|||+|||+||++||||+|++     .++|++|++||+|||||.+|+.||+||++++.++.. +
T Consensus        27 ~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~-----~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~~~-~  100 (421)
T PTZ00037         27 NEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQ-P  100 (421)
T ss_pred             chhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch-----HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccCCC-C
Confidence            4799999999999999999999999999999999863     489999999999999999999999999987763211 1


Q ss_pred             CCCCCCCCCCccccCCCCCCCCCCCC-CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----------------
Q 022539           82 PSYHHPHDTKPCATRNNNNNNHRAGG-AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----------------  144 (295)
Q Consensus        82 ~~~~~~~~~~~f~~~~~~~~~f~~~~-~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----------------  144 (295)
                      .. |.    ..|..      .|++++ ...++++.|+.+.|.|||+|+|+|+++++.+.+.+.|                
T Consensus       101 ~d-~~----d~f~~------~Fggg~~~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C  169 (421)
T PTZ00037        101 AD-AS----DLFDL------IFGGGRKPGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDC  169 (421)
T ss_pred             cc-hh----hhHHH------hhccccccccccCCCCEEEEeeeeHHHHhCCCceEEEeeccccccccCCCCCCCCCCccC
Confidence            11 10    11211      122111 1234578999999999999999999999998764321                


Q ss_pred             ----CCC--------------------------c---------------EEEEEEEEEEEeCCCCcCCCeEecCCCCCCC
Q 022539          145 ----HFG--------------------------K---------------PITVQEILKIDIKPGWKKGTKITFPEKGNQE  179 (295)
Q Consensus       145 ----g~G--------------------------~---------------~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~  179 (295)
                          |.|                          +               ++.+.++++|.||||+++|++|+|+|+|++.
T Consensus       170 ~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~~G~Gd~~  249 (421)
T PTZ00037        170 KLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADEK  249 (421)
T ss_pred             CCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceeccccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEEecccCCC
Confidence                111                          1               2445678999999999999999999999998


Q ss_pred             CCCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCC--CCCCcEEEEcCCCcCCC
Q 022539          180 PGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDI--IQPGSEVVIPNEGMPIS  257 (295)
Q Consensus       180 ~~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~--~~~g~~~rl~g~G~p~~  257 (295)
                      +++.||||+|+|+++||+.|+|+|+||+++++|||++||+|+++.|+||||+.+.|+||++  +++|++++|+|+|||..
T Consensus       250 ~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~geGmP~~  329 (421)
T PTZ00037        250 PNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMPTY  329 (421)
T ss_pred             CCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeCCCCcccC
Confidence            8889999999999999999999999999999999999999999999999998899999976  99999999999999976


Q ss_pred             CCCCCCCCEEEEEEEECC--CCCCHHHHHHHHHHhCC
Q 022539          258 KDPSKKGNLIIKFDIMFP--SRLTAEQKSDLKRALGG  292 (295)
Q Consensus       258 ~~~~~~GDL~v~~~v~~P--~~l~~~~~~~l~~~l~~  292 (295)
                      ++++.+|||||+|+|.||  +.||++|+++|+++++.
T Consensus       330 ~~~~~rGDL~V~~~V~~P~~~~Ls~~qk~ll~~l~~~  366 (421)
T PTZ00037        330 KSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFPQ  366 (421)
T ss_pred             CCCCCCCCEEEEEEEEcCCCCCCCHHHHHHHHHhccC
Confidence            645578999999999999  99999999999999984

>PRK14286 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=7.1e-66  Score=483.63  Aligned_cols=289  Identities=30%  Similarity=0.533  Sum_probs=236.1

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccC--
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASD--   78 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~--   78 (295)
                      -.+|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.+|++||+||+++++.+.  
T Consensus         2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~   80 (372)
T PRK14286          2 SERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGN-KESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGG   80 (372)
T ss_pred             CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-hHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccCC
Confidence            048999999999999999999999999999999999854 56899999999999999999999999999998876321  


Q ss_pred             CCCCCC--CCC--CCC-CccccCCCC-CCCCC-CCCCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----CC-
Q 022539           79 FGTPSY--HHP--HDT-KPCATRNNN-NNNHR-AGGAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----HF-  146 (295)
Q Consensus        79 ~g~~~~--~~~--~~~-~~f~~~~~~-~~~f~-~~~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g~-  146 (295)
                      ++.++|  |+.  .+. +.|..++++ .+..+ ++....+.+++|+++.|.|||+|+|+|+++++.+.|.+.|    |+ 
T Consensus        81 ~~~~~~~~~~~~~~~~~d~f~~ffgg~~~~~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G  160 (372)
T PRK14286         81 FGQGAYTDFSDIFGDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSG  160 (372)
T ss_pred             CCCCCcccccccccchhhHHHHhhCCCccCCCcccccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeeccccCCCCcCCC
Confidence            111111  110  000 112111000 00000 0001234578999999999999999999999999875421    11 


Q ss_pred             --------------------------------------------------Cc-EEEEEEEEEEEeCCCCcCCCeEecCCC
Q 022539          147 --------------------------------------------------GK-PITVQEILKIDIKPGWKKGTKITFPEK  175 (295)
Q Consensus       147 --------------------------------------------------G~-~~~~~~~l~V~Ip~G~~~G~~i~~~g~  175 (295)
                                                                        |+ ++++.++++|.||||+++|++|+|+|+
T Consensus       161 ~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~  240 (372)
T PRK14286        161 ASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKVSGE  240 (372)
T ss_pred             cCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEecccCCCCCCCcEEecceEEEEEECCCCCCCCEEEECCc
Confidence                                                              11 345568999999999999999999999


Q ss_pred             CCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCc
Q 022539          176 GNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGM  254 (295)
Q Consensus       176 G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~  254 (295)
                      |++.+ +..+|||+|+|+++||+.|+|+|+||+++++|||++|++|+++.|+|+||++++|+||+++++|+++||+|+||
T Consensus       241 G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g~~~g~~~ri~G~G~  320 (372)
T PRK14286        241 GEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEGTESGQVFRLKGHGM  320 (372)
T ss_pred             cccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCCCEEEEEeCCccCCCcEEEECCCCC
Confidence            99876 45679999999999999999999999999999999999999999999999989999999999999999999999


Q ss_pred             CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          255 PISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       255 p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                      |..+ ...+|||||+|+|.||+.|+++|+++|++++.
T Consensus       321 P~~~-~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~  356 (372)
T PRK14286        321 PYLG-AYGKGDQHVIVKIEIPKKITRRQRELIEEFAR  356 (372)
T ss_pred             CCCC-CCCCCcEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence            9765 34689999999999999999999999999986

>PRK14278 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=5.5e-65  Score=478.55  Aligned_cols=280  Identities=30%  Similarity=0.496  Sum_probs=233.9

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCC
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFG   80 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g   80 (295)
                      |.+|||+||||+++||.+|||+|||+||++||||+|++  ++|+++|++|++||+||+||.+|++||+||+++..+++.+
T Consensus         1 m~~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~--~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~~~~   78 (378)
T PRK14278          1 MARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGGG   78 (378)
T ss_pred             CCCCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCc--HHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccccCCC
Confidence            88999999999999999999999999999999999984  5789999999999999999999999999998643321100


Q ss_pred             CCCC---CCCCCCCccccCCCCCCCCCCCC-----CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC--------
Q 022539           81 TPSY---HHPHDTKPCATRNNNNNNHRAGG-----AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD--------  144 (295)
Q Consensus        81 ~~~~---~~~~~~~~f~~~~~~~~~f~~~~-----~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~--------  144 (295)
                       ++|   |.+. .+.|..      .|++++     ...++++.|+++.|.|||+|+|+|+++++.+.+.+.|        
T Consensus        79 -~g~~~~f~~~-~d~f~~------ffgg~g~~~~~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~  150 (378)
T PRK14278         79 -GGFGGGFGGL-GDVFEA------FFGGGAASRGPRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGT  150 (378)
T ss_pred             -CCCCcCcCch-hHHHHH------HhCCCCCCCCCccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCccC
Confidence             111   1110 011211      122111     0134578999999999999999999999999875421        


Q ss_pred             -------------CCCc---------------------------------------EEEEEEEEEEEeCCCCcCCCeEec
Q 022539          145 -------------HFGK---------------------------------------PITVQEILKIDIKPGWKKGTKITF  172 (295)
Q Consensus       145 -------------g~G~---------------------------------------~~~~~~~l~V~Ip~G~~~G~~i~~  172 (295)
                                   |+|.                                       ++.+.++++|.||||+++|++|+|
T Consensus       151 ~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~  230 (378)
T PRK14278        151 AGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRL  230 (378)
T ss_pred             CCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEecceEEEEEECCCCCCCcEEEE
Confidence                         1111                                       235567999999999999999999


Q ss_pred             CCCCCCCCC-CCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcC
Q 022539          173 PEKGNQEPG-LPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPN  251 (295)
Q Consensus       173 ~g~G~~~~~-~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g  251 (295)
                      +|+|++.++ ..+|||+|+|+++||+.|+|+|+||+++++|||.+|++|+++.|+|+|+.++.|+||+++++|++++|+|
T Consensus       231 ~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g~~lrl~g  310 (378)
T PRK14278        231 AAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPGSVITLRG  310 (378)
T ss_pred             ccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCCcEEEECC
Confidence            999999864 5679999999999999999999999999999999999999999999977679999999999999999999


Q ss_pred             CCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          252 EGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       252 ~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                      +|||... ...+|||||+|+|.||+.||++|+++|+++++
T Consensus       311 ~G~p~~~-~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~~~~  349 (378)
T PRK14278        311 RGMPHLR-SGGRGDLHAHVEVVVPTRLDHEDIELLRELKA  349 (378)
T ss_pred             CCCCCCC-CCCCCCEEEEEEEEcCCCCCHHHHHHHHHHHh
Confidence            9999765 35689999999999999999999999999985

>PRK14279 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=6.1e-65  Score=480.01  Aligned_cols=287  Identities=28%  Similarity=0.457  Sum_probs=233.5

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc---
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS---   77 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~---   77 (295)
                      |.+|||+||||+++||.+|||+|||+||++||||+|+++ ++|+++|++|++||+|||||+||++||+||+++...+   
T Consensus         7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~   85 (392)
T PRK14279          7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGD-PAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGG   85 (392)
T ss_pred             cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhcccccccc
Confidence            468999999999999999999999999999999999854 5789999999999999999999999999997532211   


Q ss_pred             -CC---CC-CCC-CC----CCCC-Ccccc----CCCC----CCC-CCCCC----CCCCCCCCCeeeecccCHHHHhcCce
Q 022539           78 -DF---GT-PSY-HH----PHDT-KPCAT----RNNN----NNN-HRAGG----AGPKPTPTPIETQLLCTLEELYKGAR  133 (295)
Q Consensus        78 -~~---g~-~~~-~~----~~~~-~~f~~----~~~~----~~~-f~~~~----~~~~~~~~di~~~l~itl~e~~~G~~  133 (295)
                       .+   ++ ++| ++    ..+. ..|+.    .+++    |+. |++++    ...+++++|+++.|.|||+|+|+|++
T Consensus        86 ~~~~~~~~~~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~~~~g~di~~~l~ltLee~~~G~~  165 (392)
T PRK14279         86 RRFDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRGGGSARPSRPRRGNDLETETTLDFVEAAKGVT  165 (392)
T ss_pred             ccccCCCCCCCccccccccCcChhhhhcccccccccchhhhhhhhhcCCCcccccCCCCCCCCeEEEEEEEHHHHhCCeE
Confidence             00   00 111 00    0010 11210    0001    111 22111    12345789999999999999999999


Q ss_pred             eEEEEeEEeeC----C---------------------------------------------------CCc-EEEEEEEEE
Q 022539          134 KKMKISRVLPD----H---------------------------------------------------FGK-PITVQEILK  157 (295)
Q Consensus       134 k~i~~~r~~~~----g---------------------------------------------------~G~-~~~~~~~l~  157 (295)
                      +++.+.+.+.|    |                                                   .|+ ++.+.++++
T Consensus       166 ~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~C~G~g~v~~~~~~~  245 (392)
T PRK14279        166 MPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRTRTIN  245 (392)
T ss_pred             EEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEEeCCcCCCCCCCeEEEEeeeeE
Confidence            99999775321    1                                                   111 456678999


Q ss_pred             EEeCCCCcCCCeEecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEe
Q 022539          158 IDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLP  236 (295)
Q Consensus       158 V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~  236 (295)
                      |.||||+++|++|+|+|+|++.+ +..+|||+|+|+++||+.|+|+|+||+++++|||.+|++|+++.|+|+||+ +.|+
T Consensus       246 V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~-i~v~  324 (392)
T PRK14279        246 VRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVPTLDGP-VGVK  324 (392)
T ss_pred             EEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCceEEEEcCCce-EEEE
Confidence            99999999999999999999976 456799999999999999999999999999999999999999999999997 8999


Q ss_pred             eCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          237 VTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       237 i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                      ||+++++|+++||+|+|||...  +.+|||||+|+|.||+.|+++|+++|++++.
T Consensus       325 Ip~g~~~g~~iri~g~G~p~~~--~~~GDL~I~~~v~~P~~Ls~~q~~~l~~~~~  377 (392)
T PRK14279        325 VPAGTADGRILRVRGRGVPKRS--GGAGDLLVTVKVAVPPNLDGAAAEALEAYAE  377 (392)
T ss_pred             ECCCCCCCCEEEECCCCCCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            9999999999999999999643  5689999999999999999999999999986

>PRK14295 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.5e-64  Score=476.91  Aligned_cols=286  Identities=28%  Similarity=0.485  Sum_probs=237.0

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccC----CCCCCCCc
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDL----YGPEGLKA   76 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~----~g~~~~~~   76 (295)
                      |.+|||+||||+++||.+|||+|||+||++||||+|+.+ .+|+++|++|++||+||+||.+|++||+    ||++++..
T Consensus         7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~   85 (389)
T PRK14295          7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGD-AKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRP   85 (389)
T ss_pred             cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-hhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhccccccc
Confidence            578999999999999999999999999999999999754 4689999999999999999999999999    99988763


Q ss_pred             cCC-C-CCCC-CCCCCCCcccc---------CCC----CCCC-CCCCC-CCCCCCCCCeeeecccCHHHHhcCceeEEEE
Q 022539           77 SDF-G-TPSY-HHPHDTKPCAT---------RNN----NNNN-HRAGG-AGPKPTPTPIETQLLCTLEELYKGARKKMKI  138 (295)
Q Consensus        77 ~~~-g-~~~~-~~~~~~~~f~~---------~~~----~~~~-f~~~~-~~~~~~~~di~~~l~itl~e~~~G~~k~i~~  138 (295)
                      +.. + +++| |+..  +.|+.         .++    .|+. |++++ ...++++.|+++.|.|||+|+|+|++++|.+
T Consensus        86 ~~~~~~~~~~~~~~~--~~f~~~~~~~~~~~~~~~f~d~f~~~fg~~~~~~~~~~g~di~~~l~lsLee~~~G~~k~i~~  163 (389)
T PRK14295         86 GPGGGGGGGFNFDLG--DLFGGGAQGGGGAGGGGGLGDVFGGLFNRGGRRTQPRRGADVESEVTLSFTEAIDGATVPLRL  163 (389)
T ss_pred             CCCCCCCCCCCcccc--cccccccccccccccccchhhhhcccccCCCCCCCCCCCCCEEEEEEEEHHHHhCCceEEEEe
Confidence            211 1 1121 1110  11110         000    0111 22211 1334578999999999999999999999999


Q ss_pred             eEEeeC----C---------------------------------------------------CCc-EEEEEEEEEEEeCC
Q 022539          139 SRVLPD----H---------------------------------------------------FGK-PITVQEILKIDIKP  162 (295)
Q Consensus       139 ~r~~~~----g---------------------------------------------------~G~-~~~~~~~l~V~Ip~  162 (295)
                      .+.+.|    |                                                   .|+ ++.+.++++|.||+
T Consensus       164 ~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~  243 (389)
T PRK14295        164 TSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPA  243 (389)
T ss_pred             eccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEeccCCCCCCCCceEeeeeEEEEEeCC
Confidence            875321    1                                                   111 34567899999999


Q ss_pred             CCcCCCeEecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCC
Q 022539          163 GWKKGTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDII  241 (295)
Q Consensus       163 G~~~G~~i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~  241 (295)
                      |+++|++|+|+|+|++.+ +..+|||+|+|+++||+.|+|+|+||+++++|||++|++|++++|+|+||+++.|+||+++
T Consensus       244 G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tldG~~~~v~ip~g~  323 (389)
T PRK14295        244 GVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPGT  323 (389)
T ss_pred             CCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeEEEECCCCCEEEEEECCcc
Confidence            999999999999999864 5678999999999999999999999999999999999999999999999988999999999


Q ss_pred             CCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          242 QPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       242 ~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                      ++|++++|+|+|||...  +.+|||||+|+|.||+.||++|+++|++++.
T Consensus       324 ~~g~~iri~G~G~p~~~--~~~GDL~i~~~v~~P~~Ls~~qk~~l~~l~~  371 (389)
T PRK14295        324 PNGRVLRVRGKGAVRKD--GTRGDLLVTVEVAVPKDLSGKAREALEAFRE  371 (389)
T ss_pred             CCCcEEEECCCCcCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            99999999999999643  5689999999999999999999999999986

>PRK14298 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.1e-64  Score=475.92  Aligned_cols=279  Identities=32%  Similarity=0.492  Sum_probs=234.5

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCCC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGT   81 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g~   81 (295)
                      .+|||+||||+++||.+|||+|||+||++||||+|++  .+|+++|++|++||++|+||.+|+.||+||+++++.+..+.
T Consensus         4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~   81 (377)
T PRK14298          4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAE   81 (377)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCC--hhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCcc
Confidence            3799999999999999999999999999999999975  46889999999999999999999999999998876321110


Q ss_pred             CCCCCCCC----CCccccCCCCCCCCCCCC---CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----C-----
Q 022539           82 PSYHHPHD----TKPCATRNNNNNNHRAGG---AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----H-----  145 (295)
Q Consensus        82 ~~~~~~~~----~~~f~~~~~~~~~f~~~~---~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g-----  145 (295)
                      .+ |...+    .+.|..      .|++++   ...++++.|+++.|.|||+|+|+|+++++.+.+.+.|    |     
T Consensus        82 ~~-~~~~~~~~~~d~f~~------~Fgg~~~~~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~  154 (377)
T PRK14298         82 DI-FRGADFGGFGDIFEM------FFGGGGRRGRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKP  154 (377)
T ss_pred             cc-cccCCcCcchhhhHh------hhcCCCccCCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCCCCCCcccC
Confidence            00 11000    011211      122211   1234678999999999999999999999999876432    1     


Q ss_pred             ------------CCc---------------------------------------EEEEEEEEEEEeCCCCcCCCeEecCC
Q 022539          146 ------------FGK---------------------------------------PITVQEILKIDIKPGWKKGTKITFPE  174 (295)
Q Consensus       146 ------------~G~---------------------------------------~~~~~~~l~V~Ip~G~~~G~~i~~~g  174 (295)
                                  .|.                                       ++.+.++++|.||||+++|++|+|+|
T Consensus       155 ~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~~~g  234 (377)
T PRK14298        155 GTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKLSG  234 (377)
T ss_pred             CCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCCCCccEEEEEEEEEecCCCCCCCCCEEEEec
Confidence                        111                                       34566899999999999999999999


Q ss_pred             CCCCC-CCCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCC
Q 022539          175 KGNQE-PGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEG  253 (295)
Q Consensus       175 ~G~~~-~~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G  253 (295)
                      +|++. .++.+|||+|+|+++||+.|+|+|+||+++++|||.+|++|+++.|+|+||+ +.|+||+++++|++++|+|+|
T Consensus       235 ~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-i~v~ip~g~~~g~~lri~g~G  313 (377)
T PRK14298        235 EGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYGK-VKMNIPPGTQTHSVFRLKDKG  313 (377)
T ss_pred             ccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCCC-EEEEeCCCcccCCEEEECCCC
Confidence            99986 5678999999999999999999999999999999999999999999999997 899999999999999999999


Q ss_pred             cCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          254 MPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       254 ~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                      ||..+ ...+|||||+|+|.+|+.|+++++++|++++.
T Consensus       314 ~p~~~-~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l~~  350 (377)
T PRK14298        314 MPRLH-GHGKGDQLVKVIVKTPTKLTQEQKELLREFDE  350 (377)
T ss_pred             CCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            99765 34689999999999999999999999999984

>PRK14285 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.9e-64  Score=472.81  Aligned_cols=288  Identities=28%  Similarity=0.479  Sum_probs=238.1

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccC-C
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASD-F   79 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~-~   79 (295)
                      |.+|||++|||+++||.+|||+|||+||++||||+|+.+ ++|.++|++|++||++|+||.+|+.||+||++++++++ +
T Consensus         1 m~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~~~   79 (365)
T PRK14285          1 MKRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGN-KEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGGF   79 (365)
T ss_pred             CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC-HHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCCCc
Confidence            789999999999999999999999999999999999864 56889999999999999999999999999998876431 1


Q ss_pred             CC--CCCCCCCCCCccccCCCCC-CCCCCC--C--CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----C---
Q 022539           80 GT--PSYHHPHDTKPCATRNNNN-NNHRAG--G--AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----H---  145 (295)
Q Consensus        80 g~--~~~~~~~~~~~f~~~~~~~-~~f~~~--~--~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g---  145 (295)
                      ++  ++ |++.. ..|+.+..-| +.|+++  +  ...+.++.|+.+.|.|||+|+|+|+++++.+.|.+.|    |   
T Consensus        80 ~~~~~g-~~~~~-~~~~~~~d~f~~~fgg~~~~~~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~  157 (365)
T PRK14285         80 EGFSGG-FSGFS-DIFEDFGDIFDSFFTGNRGQDKNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKS  157 (365)
T ss_pred             cccCCC-ccccc-cccccHHHHHHHhhcCCcCCCCCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCCCCCCccc
Confidence            11  11 11000 0010000001 112221  1  1224578999999999999999999999999876431    1   


Q ss_pred             --------------CC-----------------------------------cEEEEEEEEEEEeCCCCcCCCeEecCCCC
Q 022539          146 --------------FG-----------------------------------KPITVQEILKIDIKPGWKKGTKITFPEKG  176 (295)
Q Consensus       146 --------------~G-----------------------------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G  176 (295)
                                    .|                                   .++.+.++++|.||||+++|++|+|+|+|
T Consensus       158 ~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G  237 (365)
T PRK14285        158 EKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMRGKG  237 (365)
T ss_pred             CCCCCCccCCCccCceeEEecCceeEEeeecCCCCCcccccCCCCCCCCCCCEEeccEEEEEEECCCCCCCCEEEEeecc
Confidence                          11                                   03556789999999999999999999999


Q ss_pred             CCCCC-CCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcC
Q 022539          177 NQEPG-LPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMP  255 (295)
Q Consensus       177 ~~~~~-~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p  255 (295)
                      ++.++ ..+|||+|+|++++|+.|+|+|+||+++++|||.+|++|+++.|+|+||++++|+||+++++|++++|+|+|||
T Consensus       238 ~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g~~~g~~irl~GkG~p  317 (365)
T PRK14285        238 SVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIASKKIKIKIPKGTENDEQIIIKNEGMP  317 (365)
T ss_pred             ccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCCCCEEEEEeCCCcCCCcEEEECCCCcc
Confidence            99864 56899999999999999999999999999999999999999999999998899999999999999999999999


Q ss_pred             CCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhCC
Q 022539          256 ISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG  292 (295)
Q Consensus       256 ~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~~  292 (295)
                      ..+. ..+|||||+|+|.+|+.|+++++++|++++..
T Consensus       318 ~~~~-~~~GDL~V~~~v~~P~~l~~~q~~~l~~l~~~  353 (365)
T PRK14285        318 ILHT-EKFGNLILIIKIKTPKNLNSNAIKLLENLSKE  353 (365)
T ss_pred             CCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH
Confidence            7652 45799999999999999999999999999863

>PRK14282 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.7e-64  Score=471.36  Aligned_cols=288  Identities=30%  Similarity=0.485  Sum_probs=236.6

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc--C-
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS--D-   78 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~--~-   78 (295)
                      .+|||+||||+++||.+|||+|||+||++||||+|+.+..+|+++|++|++||++|+||.+|+.||+||++++...  . 
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~~   82 (369)
T PRK14282          3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQET   82 (369)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccccccccccC
Confidence            4799999999999999999999999999999999986545689999999999999999999999999998876521  1 


Q ss_pred             CCCCCCCCCC--CC-CccccCCCCC-CCCCCC-C----CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC-----
Q 022539           79 FGTPSYHHPH--DT-KPCATRNNNN-NNHRAG-G----AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD-----  144 (295)
Q Consensus        79 ~g~~~~~~~~--~~-~~f~~~~~~~-~~f~~~-~----~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~-----  144 (295)
                      .++++||+..  +. .+|.+  .-| +.|+++ +    ...+++++|+.+.|.|||+|+|+|+++++.+.|.+.|     
T Consensus        83 ~~~g~~~~~~~~~~~~~~~~--d~f~~~fgg~~~~~~~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~~C~~C~G  160 (369)
T PRK14282         83 ESGGGFFEDIFKDFENIFNR--DIFDIFFGERRTQEEQREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGG  160 (369)
T ss_pred             CCCCcccccccccccccccc--hhhhHhhcccCCcccccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecccCCCCCc
Confidence            1111222110  00 00100  001 112211 1    1234578999999999999999999999999875321     


Q ss_pred             ----------------CCC--------------------------------------c-EEEEEEEEEEEeCCCCcCCCe
Q 022539          145 ----------------HFG--------------------------------------K-PITVQEILKIDIKPGWKKGTK  169 (295)
Q Consensus       145 ----------------g~G--------------------------------------~-~~~~~~~l~V~Ip~G~~~G~~  169 (295)
                                      |.|                                      + ++.+.++++|.||||+++|++
T Consensus       161 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~  240 (369)
T PRK14282        161 TGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPAGVEDGTV  240 (369)
T ss_pred             cCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCCCCceeEEEEEEEEEEeCCCCCCCCE
Confidence                            111                                      1 345568999999999999999


Q ss_pred             EecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEE
Q 022539          170 ITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVV  248 (295)
Q Consensus       170 i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~r  248 (295)
                      |+|+|+|++.+ +..+|||+|+|+++||+.|+|+|+||+++++|||.||++|+++.|+|+||++++|+||+++++|++++
T Consensus       241 i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g~~~g~~ir  320 (369)
T PRK14282        241 LRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPGTQPETVFR  320 (369)
T ss_pred             EEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCCcCCCCEEE
Confidence            99999999864 56789999999999999999999999999999999999999999999999889999999999999999


Q ss_pred             EcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhCC
Q 022539          249 IPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG  292 (295)
Q Consensus       249 l~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~~  292 (295)
                      |+|+|||... .+.+|||||+|+|.+|+.|+.+++++|++++..
T Consensus       321 i~GkG~p~~~-~~~~GDL~V~~~v~~P~~l~~~~~~ll~~l~~~  363 (369)
T PRK14282        321 LKGKGLPNMR-YGRRGDLIVNVHVEIPKRLSREERKLLKELAKK  363 (369)
T ss_pred             ECCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHh
Confidence            9999999654 246899999999999999999999999999864

>PRK14277 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.6e-64  Score=475.41  Aligned_cols=285  Identities=32%  Similarity=0.531  Sum_probs=235.2

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCCC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGT   81 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g~   81 (295)
                      .+|||+||||+++||.+|||+|||+||++||||+|+++ ++|+++|++|++||+||+||.+|+.||+||+++++.+++++
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~   82 (386)
T PRK14277          4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGD-KEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQ   82 (386)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-hHHHHHHHHHHHHHHHhCCHHHHHHHHhhcccccccccccc
Confidence            47999999999999999999999999999999999854 46889999999999999999999999999998876432111


Q ss_pred             -----CCC----CCC--CCC-CccccCCCCCCCCCCCC---CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC--
Q 022539           82 -----PSY----HHP--HDT-KPCATRNNNNNNHRAGG---AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD--  144 (295)
Q Consensus        82 -----~~~----~~~--~~~-~~f~~~~~~~~~f~~~~---~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~--  144 (295)
                           ++|    |+.  .+. +.|..+.+  +.|++++   ...+.++.|+++.|.|||+|+|+|+++++.+.|.+.|  
T Consensus        83 ~~~~~~g~~~~~~~~~~~~~~d~f~~~F~--~~fgg~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C~~  160 (386)
T PRK14277         83 GGFGQGGFGGGGFDFDFGGFGDIFEDIFG--DFFGTGRRRAETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDV  160 (386)
T ss_pred             CCcCCCCccccCccccccchhHHHHHhhc--ccccCCCcCCCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccCCC
Confidence                 111    100  000 11111100  0122211   1224578999999999999999999999999876532  


Q ss_pred             --CCC--------------------------------------------------------cEEEEEEEEEEEeCCCCcC
Q 022539          145 --HFG--------------------------------------------------------KPITVQEILKIDIKPGWKK  166 (295)
Q Consensus       145 --g~G--------------------------------------------------------~~~~~~~~l~V~Ip~G~~~  166 (295)
                        |+|                                                        .++.+.++++|.||||+++
T Consensus       161 C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~  240 (386)
T PRK14277        161 CKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGIDD  240 (386)
T ss_pred             CCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeeccCCCCCCCCCcEEeeeeEEEEecCCCccC
Confidence              111                                                        0345667899999999999


Q ss_pred             CCeEecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCc
Q 022539          167 GTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGS  245 (295)
Q Consensus       167 G~~i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~  245 (295)
                      |++|+|+|+|++.+ +..+|||+|+|+++||+.|+|+|+||+++++|||++|++|+++.|+|+||+ +.|+||+++++|+
T Consensus       241 G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~  319 (386)
T PRK14277        241 GQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIEIPTLDGK-VKFTIPEGTQTGT  319 (386)
T ss_pred             CcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEEECCCCCCCC
Confidence            99999999999864 567899999999999999999999999999999999999999999999998 8999999999999


Q ss_pred             EEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          246 EVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       246 ~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                      +++|+|+|||..+. ..+|||||+|+|.||+.||++|+++|++++.
T Consensus       320 ~~ri~g~G~p~~~~-~~~GDL~v~~~V~~P~~Ls~~qk~~l~~l~~  364 (386)
T PRK14277        320 KFRLRGKGIPHLRG-RGRGDQIVKVYIEVPKKLTEKQKELLREFEK  364 (386)
T ss_pred             EEEECCCCCCCCCC-CCCCCEEEEEEEEeCCCCCHHHHHHHHHHHh
Confidence            99999999997653 4689999999999999999999999999984

>PRK14287 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.1e-64  Score=471.58  Aligned_cols=279  Identities=27%  Similarity=0.482  Sum_probs=233.1

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCC
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFG   80 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g   80 (295)
                      -.+|||++|||+++||.+|||+|||+||++||||+|++  ++|+++|++|++||++|+||.+|++||+||+++++.+..+
T Consensus         2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~--~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~   79 (371)
T PRK14287          2 SKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA--PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGG   79 (371)
T ss_pred             CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCC
Confidence            03799999999999999999999999999999999974  4688999999999999999999999999999887632111


Q ss_pred             -C-CCCCCCCCCCccccCCCCCCCCCCCC----CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----CC----
Q 022539           81 -T-PSYHHPHDTKPCATRNNNNNNHRAGG----AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----HF----  146 (295)
Q Consensus        81 -~-~~~~~~~~~~~f~~~~~~~~~f~~~~----~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g~----  146 (295)
                       + ++ |++. .+.|..      .|++++    ...+.++.|+++.|.|||+|+|+|+++++.+.|.+.|    |+    
T Consensus        80 ~~~~~-f~~~-~d~f~~------~fgg~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~  151 (371)
T PRK14287         80 GGAGD-FGGF-SDIFDM------FFGGGGGRRNPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKP  151 (371)
T ss_pred             CCCcc-ccch-HHHHHh------hhccccCCCCCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcccCC
Confidence             1 11 2110 011211      122110    1224578999999999999999999999999875432    11    


Q ss_pred             -------------Cc---------------------------------------EEEEEEEEEEEeCCCCcCCCeEecCC
Q 022539          147 -------------GK---------------------------------------PITVQEILKIDIKPGWKKGTKITFPE  174 (295)
Q Consensus       147 -------------G~---------------------------------------~~~~~~~l~V~Ip~G~~~G~~i~~~g  174 (295)
                                   |.                                       ++.+.++++|.||||+++|++|+|+|
T Consensus       152 ~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~G  231 (371)
T PRK14287        152 GTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSG  231 (371)
T ss_pred             CCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEEcc
Confidence                         10                                       23455789999999999999999999


Q ss_pred             CCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCC
Q 022539          175 KGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEG  253 (295)
Q Consensus       175 ~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G  253 (295)
                      +|++.+ +..+|||+|+|+++||+.|+|+|+||++++.|||.+|++|+++.|+|+||+ +.|+||+++++|+++||+|+|
T Consensus       232 ~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~ri~g~G  310 (371)
T PRK14287        232 QGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGK-VKLKIPAGTQTGTSFRLRGKG  310 (371)
T ss_pred             CCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCCC-EEEEECCCccCCcEEEEcCCC
Confidence            999874 567899999999999999999999999999999999999999999999997 899999999999999999999


Q ss_pred             cCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          254 MPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       254 ~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                      ||.... +.+|||||+|+|.+|+.|+.+|+++|++++.
T Consensus       311 ~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~  347 (371)
T PRK14287        311 VPNVHG-RGQGDQHVQVRVVTPKNLTEKEKELMREFAG  347 (371)
T ss_pred             ccCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHh
Confidence            997653 4689999999999999999999999999984

>PRK14281 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.2e-64  Score=475.29  Aligned_cols=288  Identities=34%  Similarity=0.591  Sum_probs=235.7

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCC-
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDF-   79 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~-   79 (295)
                      |.+|||+||||+++|+.+|||+|||+||++||||+|+++ .+|+++|++|++||++|+||.+|+.||+||+++++.+.. 
T Consensus         1 ~~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~   79 (397)
T PRK14281          1 MKRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDN-KEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAAS   79 (397)
T ss_pred             CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-hHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhcccccc
Confidence            789999999999999999999999999999999999864 468899999999999999999999999999988763211 


Q ss_pred             -CCCCC----CCCCCC-----CccccCC---C----CC-CCCCCCCC----CCCCCCCCeeeecccCHHHHhcCceeEEE
Q 022539           80 -GTPSY----HHPHDT-----KPCATRN---N----NN-NNHRAGGA----GPKPTPTPIETQLLCTLEELYKGARKKMK  137 (295)
Q Consensus        80 -g~~~~----~~~~~~-----~~f~~~~---~----~~-~~f~~~~~----~~~~~~~di~~~l~itl~e~~~G~~k~i~  137 (295)
                       ++++|    ++..+.     +.|++.+   +    +| ..|+++..    ..+.++.|+++.|.|||+|+|+|+++++.
T Consensus        80 ~~~~~~~~~~~~~~d~f~~f~~~Fgg~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~  159 (397)
T PRK14281         80 GGGPGYGGGGGDFNDIFSAFNDMFGGGARRGGGSPFGFEDVFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLK  159 (397)
T ss_pred             CCCCCCCcCCCCHHHHHHHHHHHhCCCcccccccccccccccCCCcccccccCCCCCCCEEEEEEeEHHHHhCCeEEEEE
Confidence             11111    000000     1232110   0    00 00111100    12246889999999999999999999999


Q ss_pred             EeEEeeC----C----------------CCc---------------------------------------EEEEEEEEEE
Q 022539          138 ISRVLPD----H----------------FGK---------------------------------------PITVQEILKI  158 (295)
Q Consensus       138 ~~r~~~~----g----------------~G~---------------------------------------~~~~~~~l~V  158 (295)
                      +.|.+.|    |                .|.                                       ++.+.++++|
T Consensus       160 ~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V  239 (397)
T PRK14281        160 IKKQVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVKV  239 (397)
T ss_pred             EEeeecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeCCCCCCCCCCccEecceEEEE
Confidence            9876432    1                110                                       2345678999


Q ss_pred             EeCCCCcCCCeEecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEee
Q 022539          159 DIKPGWKKGTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPV  237 (295)
Q Consensus       159 ~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i  237 (295)
                      .||||+++|++|+|+|+|++.+ ++.+|||+|+|+++||+.|+|+|+||+++++|||.+||+|+++.|+|+||+ +.|+|
T Consensus       240 ~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~-i~v~i  318 (397)
T PRK14281        240 TVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTLDGA-VKLTI  318 (397)
T ss_pred             ecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEeecCCcc-EEEEe
Confidence            9999999999999999999976 567999999999999999999999999999999999999999999999997 89999


Q ss_pred             CCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          238 TDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       238 ~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                      |+++++|+++||+|+|||... .+.+|||||+|+|.||+.||++|+++|++++.
T Consensus       319 p~g~~~G~~~ri~g~G~P~~~-~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~  371 (397)
T PRK14281        319 PAGTQPETMLRIPGKGIGHLR-GSGRGDQYVRVNVFVPKEVSHQDKELLKELKK  371 (397)
T ss_pred             CCccCCCcEEEEcCCCCCCCC-CCCCCCEEEEEEEEcCCCCCHHHHHHHHHHHh
Confidence            999999999999999999765 34689999999999999999999999999985

>PRK14276 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=3.5e-64  Score=473.65  Aligned_cols=280  Identities=27%  Similarity=0.443  Sum_probs=233.5

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCC
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFG   80 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g   80 (295)
                      -.+|||+||||+++||.+|||+|||+||++||||+|++  +.|+++|++|++||++|+||.+|++||+||+++++++..+
T Consensus         2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~--~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~   79 (380)
T PRK14276          2 NNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE--PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGG   79 (380)
T ss_pred             CCCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--cCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCC
Confidence            04899999999999999999999999999999999985  4688999999999999999999999999999887642111


Q ss_pred             ---C-CCCCCC---C-CC-CccccCCCCCCCCCCCC----CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC---
Q 022539           81 ---T-PSYHHP---H-DT-KPCATRNNNNNNHRAGG----AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD---  144 (295)
Q Consensus        81 ---~-~~~~~~---~-~~-~~f~~~~~~~~~f~~~~----~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~---  144 (295)
                         + ++ |..   . +. +.|+.      .|++++    ...++++.|+.+.|.|||+|+|+|+++++.+.+.+.|   
T Consensus        80 ~~~~~~~-~~~~~~~~~~~d~f~~------~fgg~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~~C  152 (380)
T PRK14276         80 GAGGFGG-FDGSGGFGGFEDIFSS------FFGGGGARRNPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTC  152 (380)
T ss_pred             CCCCCCC-ccccccccchhhHHHH------HhCccccccCcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCCCC
Confidence               1 11 110   0 00 11111      122111    1224578899999999999999999999999775321   


Q ss_pred             -CC-----------------C--------------------------------------c-EEEEEEEEEEEeCCCCcCC
Q 022539          145 -HF-----------------G--------------------------------------K-PITVQEILKIDIKPGWKKG  167 (295)
Q Consensus       145 -g~-----------------G--------------------------------------~-~~~~~~~l~V~Ip~G~~~G  167 (295)
                       |+                 |                                      + ++.+.++++|.||||+++|
T Consensus       153 ~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G  232 (380)
T PRK14276        153 NGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETG  232 (380)
T ss_pred             cCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccccCCCCCCCCceEEEEEEEEEEEeCCCccCC
Confidence             11                 1                                      1 3456688999999999999


Q ss_pred             CeEecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcE
Q 022539          168 TKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSE  246 (295)
Q Consensus       168 ~~i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~  246 (295)
                      ++|+|+|+|++.+ +..+|||+|+|+++||+.|+|+|+||+++++|||.+|++|+++.|+|++|+ ++|+||+++++|++
T Consensus       233 ~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tldg~-i~v~ip~g~~~g~~  311 (380)
T PRK14276        233 QQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTVHGD-VELKIPAGTQTGKK  311 (380)
T ss_pred             cEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcCCCc-EEEEECCCCCCCCE
Confidence            9999999999875 456799999999999999999999999999999999999999999999997 89999999999999


Q ss_pred             EEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          247 VVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       247 ~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                      ++|+|+|||..+ ...+|||||+|+|.||+.|+++|+++|++++.
T Consensus       312 ~~i~g~G~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~~l~~~~~  355 (380)
T PRK14276        312 FRLRGKGAPKLR-GGGNGDQHVTVNIVTPTKLNDAQKEALKAFAK  355 (380)
T ss_pred             EEECCCCcCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            999999999765 24679999999999999999999999999984

>PRK14280 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.5e-64  Score=472.30  Aligned_cols=280  Identities=29%  Similarity=0.487  Sum_probs=234.5

Q ss_pred             CC-CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCC
Q 022539            1 MG-VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDF   79 (295)
Q Consensus         1 m~-~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~   79 (295)
                      |. +|||+||||+++||.+|||+|||+||++||||+|++  +.|+++|++|++||++||||.+|++||+||+++++.+..
T Consensus         1 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~--~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~   78 (376)
T PRK14280          1 MAKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE--EGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFG   78 (376)
T ss_pred             CCCCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcC
Confidence            53 799999999999999999999999999999999975  458899999999999999999999999999988764311


Q ss_pred             ----CCCCCCCC-CCC-CccccCCCCCCCCCCCC----CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----C
Q 022539           80 ----GTPSYHHP-HDT-KPCATRNNNNNNHRAGG----AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----H  145 (295)
Q Consensus        80 ----g~~~~~~~-~~~-~~f~~~~~~~~~f~~~~----~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g  145 (295)
                          ++.+ |.+ .+. +.|..      .|++++    ...++++.|+.+.|.|||+|+|+|+++++.+.|.+.|    |
T Consensus        79 ~~~~~~~~-~~~~~~~~d~f~~------~fgg~~~~~~~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G  151 (376)
T PRK14280         79 GGGFGGGD-FGGGFGFEDIFSS------FFGGGGRRRDPNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHG  151 (376)
T ss_pred             CCCCCCCC-ccccccchhhHHH------HhCCccccCcccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCCC
Confidence                1001 110 000 11221      122111    1224578999999999999999999999999876432    1


Q ss_pred             CC--------------------------------------------------------cEEEEEEEEEEEeCCCCcCCCe
Q 022539          146 FG--------------------------------------------------------KPITVQEILKIDIKPGWKKGTK  169 (295)
Q Consensus       146 ~G--------------------------------------------------------~~~~~~~~l~V~Ip~G~~~G~~  169 (295)
                      +|                                                        .++.+.++++|.||+|+++|++
T Consensus       152 ~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~  231 (376)
T PRK14280        152 SGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQ  231 (376)
T ss_pred             cccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCCCCceEEEEEEEEEEEeCCCCcCCcE
Confidence            11                                                        0245668999999999999999


Q ss_pred             EecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEE
Q 022539          170 ITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVV  248 (295)
Q Consensus       170 i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~r  248 (295)
                      |+|+|+|++.+ +..+|||+|+|+++||+.|+|+|+||+++++|||++|++|+++.|+|+||+ +.|+||+++++|++++
T Consensus       232 i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg~-i~v~ip~g~~~g~~~~  310 (376)
T PRK14280        232 IRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHGK-VKLKIPAGTQTGTQFR  310 (376)
T ss_pred             EEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCce-EEEEECCCCCCCcEEE
Confidence            99999999875 567899999999999999999999999999999999999999999999996 8999999999999999


Q ss_pred             EcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          249 IPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       249 l~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                      |+|+|||... ...+|||||+|+|.+|+.||++|+++|++++.
T Consensus       311 i~g~G~p~~~-~~~~GDL~v~~~v~~P~~Ls~~q~~~l~~l~~  352 (376)
T PRK14280        311 LKGKGVPNVR-GYGQGDQYVVVRVVTPTKLTDRQKELLREFAE  352 (376)
T ss_pred             EcCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            9999999765 34689999999999999999999999999984

>PRK14297 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=8.3e-64  Score=471.37  Aligned_cols=286  Identities=28%  Similarity=0.514  Sum_probs=235.6

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc-CCC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS-DFG   80 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~-~~g   80 (295)
                      .+|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||++|+||.+|++||+||+++++.+ +++
T Consensus         3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~~~~   81 (380)
T PRK14297          3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGN-KEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFG   81 (380)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccCCCC
Confidence            47999999999999999999999999999999999864 4689999999999999999999999999999887632 111


Q ss_pred             CCCC--CC--CC-CC-CccccCCCCCCCCCCC--CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----C---
Q 022539           81 TPSY--HH--PH-DT-KPCATRNNNNNNHRAG--GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----H---  145 (295)
Q Consensus        81 ~~~~--~~--~~-~~-~~f~~~~~~~~~f~~~--~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g---  145 (295)
                      .++|  |+  .. +. +.|..+.++  .+++.  +...+++++|+++.|.|||+|+|+|+++++.+.+.+.|    |   
T Consensus        82 ~~~~~~~~~~~~~~~~d~f~~~fgg--~~g~~~~~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~  159 (380)
T PRK14297         82 SGGFGGFDFSDMGGFGDIFDSFFGG--GFGSSSRRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGA  159 (380)
T ss_pred             CCCCCCcCcccccchhHHHHHHhcc--CccccccccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCCCcccccc
Confidence            1111  11  00 00 112111000  01111  11234578999999999999999999999999875432    1   


Q ss_pred             --------------CCc---------------------------------------EEEEEEEEEEEeCCCCcCCCeEec
Q 022539          146 --------------FGK---------------------------------------PITVQEILKIDIKPGWKKGTKITF  172 (295)
Q Consensus       146 --------------~G~---------------------------------------~~~~~~~l~V~Ip~G~~~G~~i~~  172 (295)
                                    .|.                                       ++.+.++++|.||||+++|++|++
T Consensus       160 ~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l  239 (380)
T PRK14297        160 KPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPL  239 (380)
T ss_pred             cCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEE
Confidence                          110                                       245678999999999999999999


Q ss_pred             CCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcC
Q 022539          173 PEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPN  251 (295)
Q Consensus       173 ~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g  251 (295)
                      +|+|++.+ +..+|||+|+|++++|+.|+|+|+||+++++|||++|++|+++.|+|++|+ ++|+||+++++|+++||+|
T Consensus       240 ~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg~-~~v~ip~g~~~g~~~ri~g  318 (380)
T PRK14297        240 RGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTVDGE-VKYEVPAGTQPGTVFRLKG  318 (380)
T ss_pred             ecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcCCCc-EEEEECCCcCCCCEEEEcC
Confidence            99999865 556899999999999999999999999999999999999999999999997 8999999999999999999


Q ss_pred             CCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhCC
Q 022539          252 EGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG  292 (295)
Q Consensus       252 ~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~~  292 (295)
                      +|||..+ .+.+|||||+|+|.||+.||++|+++|+++++.
T Consensus       319 ~G~p~~~-~~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~~  358 (380)
T PRK14297        319 KGVPRVN-STGRGNQYVTVIVDIPKKLNSKQKEALTMFMEA  358 (380)
T ss_pred             CCcCCCC-CCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHh
Confidence            9999765 356899999999999999999999999999863

>PRK14284 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=8.3e-64  Score=472.71  Aligned_cols=286  Identities=30%  Similarity=0.532  Sum_probs=234.1

Q ss_pred             CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccC--CC
Q 022539            3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASD--FG   80 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~--~g   80 (295)
                      .|||+||||+++||.+|||+|||+||++||||+|+++ +.|+++|++|++||++|+|+.+|+.||+||++++..+.  ++
T Consensus         1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~~   79 (391)
T PRK14284          1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGD-AEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFG   79 (391)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-hHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCcC
Confidence            4999999999999999999999999999999999864 56899999999999999999999999999998764321  11


Q ss_pred             CCCCCCC-CCC-----Ccccc----CCCCCC-CCCC-------CC-CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEE
Q 022539           81 TPSYHHP-HDT-----KPCAT----RNNNNN-NHRA-------GG-AGPKPTPTPIETQLLCTLEELYKGARKKMKISRV  141 (295)
Q Consensus        81 ~~~~~~~-~~~-----~~f~~----~~~~~~-~f~~-------~~-~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~  141 (295)
                      +++| .+ .++     ..|++    .+.-|+ .|++       .. ...++++.|+.+.|.|||+|+|+|+++++.+.+.
T Consensus        80 ~~g~-~~~~~~~~~~~~~f~~~~~~~~d~f~~~fgg~g~~~~~~~~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~  158 (391)
T PRK14284         80 GAGM-GNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGY  158 (391)
T ss_pred             CCCc-CcccchhhhccccccccccccccchhhhccCccccccccccCCCcCCCCCeEEEEEEEHHHHhCCeeEEEEEeee
Confidence            1121 10 000     00110    000011 1221       00 1224578899999999999999999999999875


Q ss_pred             eeC----CC---------------------------------------------------Cc-EEEEEEEEEEEeCCCCc
Q 022539          142 LPD----HF---------------------------------------------------GK-PITVQEILKIDIKPGWK  165 (295)
Q Consensus       142 ~~~----g~---------------------------------------------------G~-~~~~~~~l~V~Ip~G~~  165 (295)
                      +.|    |+                                                   |+ ++.+.++++|.||||++
T Consensus       159 ~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~  238 (391)
T PRK14284        159 KSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGVD  238 (391)
T ss_pred             ccCCCCcccccCCCCCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcccCCcCCCCCCcceecceEEEEEEECCCCC
Confidence            331    11                                                   11 34566899999999999


Q ss_pred             CCCeEecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccC-CcEEEEeeCCCCCC
Q 022539          166 KGTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALD-GRNLTLPVTDIIQP  243 (295)
Q Consensus       166 ~G~~i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~-g~~i~v~i~~~~~~  243 (295)
                      +|++|+|+|+|++.+ ++.+|||+|+|+++||+.|+|+|+||+++++|||++|++|++++|+|++ |+.++|+||+++++
T Consensus       239 ~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~~~  318 (391)
T PRK14284        239 SGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLLKEGTCRLTIPEGIQS  318 (391)
T ss_pred             CCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecCCCcEEEEEECCccCC
Confidence            999999999999986 5678999999999999999999999999999999999999999999999 66799999999999


Q ss_pred             CcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          244 GSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       244 g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                      |++++|+|+|||..+ ...+|||||+|+|.+|+.|+++|+++|++++.
T Consensus       319 g~~~~i~g~G~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~  365 (391)
T PRK14284        319 GTILKVRGQGFPNVH-GKGRGDLLVRISVETPQNLSEEQKELLRQFAA  365 (391)
T ss_pred             CeEEEECCCCCCCCC-CCCCCcEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            999999999999765 24689999999999999999999999999984

>PRK14301 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1e-63  Score=469.13  Aligned_cols=284  Identities=30%  Similarity=0.512  Sum_probs=235.4

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCCC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGT   81 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g~   81 (295)
                      .+|||++|||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.+|+.||+||++++++++. +
T Consensus         3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~~-~   80 (373)
T PRK14301          3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN-PEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGG-F   80 (373)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCC-hHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCCC-C
Confidence            58999999999999999999999999999999999864 568899999999999999999999999999988764211 1


Q ss_pred             CCCCCCCCCCccccCCCCC-CCCC--CC---CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----CCC----
Q 022539           82 PSYHHPHDTKPCATRNNNN-NNHR--AG---GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----HFG----  147 (295)
Q Consensus        82 ~~~~~~~~~~~f~~~~~~~-~~f~--~~---~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g~G----  147 (295)
                      ++ |++.. .+|..+..-| +.|+  ++   ....+.++.|+.+.|.|||+|+|+|+++++.+.+.+.|    |+|    
T Consensus        81 ~g-~~~~~-~~~~~f~d~f~~~fg~g~~~~~~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~  158 (373)
T PRK14301         81 GG-FSSAE-DIFSHFSDIFGDLFGFSGGGSRRGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPG  158 (373)
T ss_pred             CC-ccccc-ccccchHHHHHHHhhccCcccccCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccCCCCCCcccCCC
Confidence            12 21100 0111000000 0111  11   11234578999999999999999999999999775431    111    


Q ss_pred             -----------------------------------------------c-EEEEEEEEEEEeCCCCcCCCeEecCCCCCCC
Q 022539          148 -----------------------------------------------K-PITVQEILKIDIKPGWKKGTKITFPEKGNQE  179 (295)
Q Consensus       148 -----------------------------------------------~-~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~  179 (295)
                                                                     + ++.+.++++|.||||+++|++|+|+|+|++.
T Consensus       159 ~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~  238 (373)
T PRK14301        159 TSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEGEPG  238 (373)
T ss_pred             CCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeecCCCCCCCCCCceeccceEEEEEeCCCCcCCCEEEEeccccCC
Confidence                                                           1 3456689999999999999999999999987


Q ss_pred             C-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCC
Q 022539          180 P-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISK  258 (295)
Q Consensus       180 ~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~  258 (295)
                      + +..+|||+|+|++++|+.|+|+|+||+++++|||.+|++|+++.|+|+||+ ++|+||+++++|++++|+|+|||..+
T Consensus       239 ~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG~-i~v~ip~g~~~g~~~ri~g~G~p~~~  317 (373)
T PRK14301        239 VHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDP-VTLDIPKGTQSGEVFRLRGKGLPYLG  317 (373)
T ss_pred             CCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCcc-EEEEECCCcCCCcEEEEcCCCCCCCC
Confidence            5 567899999999999999999999999999999999999999999999997 99999999999999999999999765


Q ss_pred             CCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          259 DPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       259 ~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                       ...+|||||+|+|.+|+.|+++|+++|++++.
T Consensus       318 -~~~~GDL~I~~~V~~P~~l~~~q~~~l~~l~~  349 (373)
T PRK14301        318 -SSQKGDLLVEVSVVTPTKLTKRQEELLREFEA  349 (373)
T ss_pred             -CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence             34689999999999999999999999999874

>PRK14294 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.9e-63  Score=466.73  Aligned_cols=286  Identities=33%  Similarity=0.563  Sum_probs=235.9

Q ss_pred             CC-CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCC
Q 022539            1 MG-VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDF   79 (295)
Q Consensus         1 m~-~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~   79 (295)
                      |. +|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.+|+.||+||+++++.+++
T Consensus         1 ~~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~~   79 (366)
T PRK14294          1 MVKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGD-KEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGF   79 (366)
T ss_pred             CCCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-hHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCCC
Confidence            53 8999999999999999999999999999999999854 468899999999999999999999999999998864322


Q ss_pred             CC-CCC---CCCCCCCccccCCCCCCCCCCCC-CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----CC----
Q 022539           80 GT-PSY---HHPHDTKPCATRNNNNNNHRAGG-AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----HF----  146 (295)
Q Consensus        80 g~-~~~---~~~~~~~~f~~~~~~~~~f~~~~-~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g~----  146 (295)
                      ++ ++|   |+.. .+.|..+++ +++.+++. ...+.+++|+++.|.|||+|+|+|+++++.+.+.+.|    |+    
T Consensus        80 ~~~~~~~~~~~~~-~d~f~~~fg-~g~~~~~~~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~G~G~~~  157 (366)
T PRK14294         80 SGFSGFDDIFSSF-GDIFEDFFG-FGGGRRGRSRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEP  157 (366)
T ss_pred             CCcCccccchhhh-hhhHHHhhc-cCCCcCCcccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeecccCCCCCCccccC
Confidence            21 121   1100 011211100 00000000 1234578999999999999999999999999876421    11    


Q ss_pred             -----------------------------------------------Cc-EEEEEEEEEEEeCCCCcCCCeEecCCCCCC
Q 022539          147 -----------------------------------------------GK-PITVQEILKIDIKPGWKKGTKITFPEKGNQ  178 (295)
Q Consensus       147 -----------------------------------------------G~-~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~  178 (295)
                                                                     |+ ++.+.++++|.||||+++|++|+|+|+|++
T Consensus       158 ~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~  237 (366)
T PRK14294        158 GTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGEA  237 (366)
T ss_pred             CCCcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecCcCCCCCCCceEeecceeEEEecCCCCcCCcEEEEccCccC
Confidence                                                           11 345668999999999999999999999998


Q ss_pred             C-CCCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCC
Q 022539          179 E-PGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPIS  257 (295)
Q Consensus       179 ~-~~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~  257 (295)
                      . .++.+|||+|+|+++||+.|+|+|+||++++.|||.+|++|+++.|+|+||+ ++|+||+++++|++++|+|+|||..
T Consensus       238 ~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~iri~G~G~p~~  316 (366)
T PRK14294        238 GVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGE-RELKIPKGTQPGDIFRFKGKGIPSL  316 (366)
T ss_pred             CCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCCc-EEEEECCCcCCCCEEEECCCCCCCC
Confidence            6 4677899999999999999999999999999999999999999999999997 7999999999999999999999976


Q ss_pred             CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          258 KDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       258 ~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                      . ...+|||||+|+|.+|+.|+++++++|++++.
T Consensus       317 ~-~~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~  349 (366)
T PRK14294        317 R-GGGRGDQIIEVEVKVPTRLTKKQEELLTEFAR  349 (366)
T ss_pred             C-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence            5 24689999999999999999999999999985

>PRK14300 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4.4e-63  Score=465.01  Aligned_cols=285  Identities=28%  Similarity=0.467  Sum_probs=236.4

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccC--
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASD--   78 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~--   78 (295)
                      |.+|||+||||+++||.+|||+|||+||++||||+|++  ..++++|++|++||++|+|+.+|+.||+||++++..+.  
T Consensus         1 ~~~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~   78 (372)
T PRK14300          1 MSQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDA--KDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSR   78 (372)
T ss_pred             CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--cCHHHHHHHHHHHHHHhhhHhHhhHHHhcccccccccccc
Confidence            88999999999999999999999999999999999974  35788999999999999999999999999998876321  


Q ss_pred             --CCC-CCCCCCCCCCccccCCCCCCCCCCCCC----CCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----CCC
Q 022539           79 --FGT-PSYHHPHDTKPCATRNNNNNNHRAGGA----GPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----HFG  147 (295)
Q Consensus        79 --~g~-~~~~~~~~~~~f~~~~~~~~~f~~~~~----~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g~G  147 (295)
                        .++ ++ |+.....+|....++  .|++++.    ..+.++.|+++.|.|||+|+|+|+++++.+.|.+.|    |+|
T Consensus        79 ~~~g~~~~-~~~~~~~~f~~~f~~--~~gg~~~~~~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~g  155 (372)
T PRK14300         79 GGGGNHGG-FHPDINDIFGDFFSD--FMGGSRRSRPTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSG  155 (372)
T ss_pred             CCCCCCCc-cccchhhhHHHHHHh--hcCCCCCCCCCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCcc
Confidence              010 11 211000112111000  1221111    112478899999999999999999999999876432    111


Q ss_pred             ----------------------------------------------------cEEEEEEEEEEEeCCCCcCCCeEecCCC
Q 022539          148 ----------------------------------------------------KPITVQEILKIDIKPGWKKGTKITFPEK  175 (295)
Q Consensus       148 ----------------------------------------------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~  175 (295)
                                                                          .++.+.++++|.||||+++|++|+++|+
T Consensus       156 ~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~  235 (372)
T PRK14300        156 SEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGE  235 (372)
T ss_pred             cCCCCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccceEeCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEEEEecc
Confidence                                                                0355678999999999999999999999


Q ss_pred             CCCC-CCCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCc
Q 022539          176 GNQE-PGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGM  254 (295)
Q Consensus       176 G~~~-~~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~  254 (295)
                      |++. ++..+|||+|+|+++||+.|+|+|+||++++.|+|++|++|+++.|+|+||++++|+||+++++|++++|+|+||
T Consensus       236 G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri~g~G~  315 (372)
T PRK14300        236 GEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGM  315 (372)
T ss_pred             ccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEECCCCC
Confidence            9986 467899999999999999999999999999999999999999999999999889999999999999999999999


Q ss_pred             CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          255 PISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       255 p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                      |..+ ...+|||||+|+|.||+.||++|+++|++++.
T Consensus       316 p~~~-~~~~GDL~V~~~v~~P~~ls~~qk~~l~~l~~  351 (372)
T PRK14300        316 SKMR-STIRGDMLTHIHVEVPKNLSKRQRELLEEFKK  351 (372)
T ss_pred             CCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            9764 24689999999999999999999999999985

>PRK14291 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=4e-63  Score=466.80  Aligned_cols=288  Identities=34%  Similarity=0.558  Sum_probs=236.3

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCC-
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDF-   79 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~-   79 (295)
                      |.+|||++|||+++||.+|||+|||+||++||||+|++  ++|+++|++|++||++||||.+|+.||+||++++..+.. 
T Consensus         1 ~~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~   78 (382)
T PRK14291          1 AKKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQ   78 (382)
T ss_pred             CCCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--ccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCc
Confidence            78999999999999999999999999999999999985  468899999999999999999999999999987753211 


Q ss_pred             --CCCCC--CCCCCC-CccccCCC--CC-CCCCCC----CC----CCCCCCCCeeeecccCHHHHhcCceeEEEEeEEee
Q 022539           80 --GTPSY--HHPHDT-KPCATRNN--NN-NNHRAG----GA----GPKPTPTPIETQLLCTLEELYKGARKKMKISRVLP  143 (295)
Q Consensus        80 --g~~~~--~~~~~~-~~f~~~~~--~~-~~f~~~----~~----~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~  143 (295)
                        +..+|  |...+. ..|..+.+  ++ +.|++.    +.    ..+.+++|+.+.|.|||+|+|+|+++++.+.+.+.
T Consensus        79 ~~~~~~~~~~~~~~~~d~f~~~f~~fg~~~~fg~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~  158 (382)
T PRK14291         79 QQGQEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRATRERRKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVP  158 (382)
T ss_pred             cccccccccccCCCHHHHHHHHHHhccccccccccccccccccccccccCCCCEEEEEEEEHHHhhCCEEEEEEEeeecc
Confidence              11111  111111 11111000  00 012210    00    12347889999999999999999999999987643


Q ss_pred             C----CCC---------------------------------------------------cEEEEEEEEEEEeCCCCcCCC
Q 022539          144 D----HFG---------------------------------------------------KPITVQEILKIDIKPGWKKGT  168 (295)
Q Consensus       144 ~----g~G---------------------------------------------------~~~~~~~~l~V~Ip~G~~~G~  168 (295)
                      |    |+|                                                   .++.+.++++|.||||+++|+
T Consensus       159 C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~  238 (382)
T PRK14291        159 CEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGVLREPCSKCNGRGLVIKKETIKVRIPPGVDNGS  238 (382)
T ss_pred             CCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCceEEccCCCCCCCCceEEeeeEEEEEeCCCCCCCC
Confidence            2    111                                                   135667899999999999999


Q ss_pred             eEecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEE
Q 022539          169 KITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEV  247 (295)
Q Consensus       169 ~i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~  247 (295)
                      +|+|+|+|++.+ ++.+|||+|+|+++||+.|+|+|+||++++.|||.+|++|+++.|+|+||++++|+||+++++|+++
T Consensus       239 ~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g~~~G~~i  318 (382)
T PRK14291        239 KLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPGTKEGDKI  318 (382)
T ss_pred             EEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCccCCCCEE
Confidence            999999999875 7789999999999999999999999999999999999999999999999988999999999999999


Q ss_pred             EEcCCCcCCCCCCCCCCCEEEEEEEECCC--CCC------HHHHHHHHHHhC
Q 022539          248 VIPNEGMPISKDPSKKGNLIIKFDIMFPS--RLT------AEQKSDLKRALG  291 (295)
Q Consensus       248 rl~g~G~p~~~~~~~~GDL~v~~~v~~P~--~l~------~~~~~~l~~~l~  291 (295)
                      +|+|+|||..+ ...+|||||+|+|.||+  .||      ++|+++|+++..
T Consensus       319 ~i~G~G~p~~~-~~~~GDL~V~~~V~~P~~~~ls~~~~~~~~~~~~~~~l~~  369 (382)
T PRK14291        319 RVPGKGMPRLK-GSGYGDLVVRVHIDVPKISMLSKLMGDGKKAKKLLKELDK  369 (382)
T ss_pred             EECCCCCCCCC-CCCCCCEEEEEEEEeCCCcCcCccccCCHHHHHHHHHHHh
Confidence            99999999765 24689999999999998  599      999999999864

>PRK14299 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.1e-62  Score=448.56  Aligned_cols=270  Identities=34%  Similarity=0.515  Sum_probs=223.6

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCC--
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDF--   79 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~--   79 (295)
                      .+|||+||||+++||.+|||+|||+||++||||+|++  +.++++|++|++||++|+||.+|+.||+||++++..+..  
T Consensus         3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~   80 (291)
T PRK14299          3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGP   80 (291)
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCC
Confidence            5899999999999999999999999999999999974  468899999999999999999999999999986542110  


Q ss_pred             --CCCC--CCCCC---CC-CccccCCCCCCCCCCC------CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCC
Q 022539           80 --GTPS--YHHPH---DT-KPCATRNNNNNNHRAG------GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPDH  145 (295)
Q Consensus        80 --g~~~--~~~~~---~~-~~f~~~~~~~~~f~~~------~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g  145 (295)
                        ++++  .|++.   +. +.|..+.++.+.+++.      .+..++++.|+++.+.|||+|+|+||++++++.      
T Consensus        81 ~~~~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~g~~~~~~~~~~~~g~dl~~~l~isL~ea~~G~~~~i~l~------  154 (291)
T PRK14299         81 PPGPPGGGDFSGFNVGDFSDFFQQLFGGRGGFGGFGDLFGSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEVA------  154 (291)
T ss_pred             CCCCCCCCCccccCcCCHHHHHHHHhCCCCCCCCcccccccccCCCCCCCCEEEEEEecHHHHhCCCeEEEeeC------
Confidence              1011  12111   11 1111110000000000      012245788999999999999999999998773      


Q ss_pred             CCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEE
Q 022539          146 FGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNL  225 (295)
Q Consensus       146 ~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i  225 (295)
                       |      ++++|.||||+++|++|+++|+|++.     |||+|+|++++|+.|+|+|+||+++++||+.+|++|+++.|
T Consensus       155 -g------~~~~V~Ip~G~~~G~~ir~~g~G~~~-----GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v  222 (291)
T PRK14299        155 -G------ERLSVRIPPGVREGQVIRLAGKGRQG-----GDLYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRV  222 (291)
T ss_pred             -C------EEEEEecCCCcCCCcEEEECCCCCCC-----CCEEEEEEEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEE
Confidence             3      47999999999999999999999873     99999999999999999999999999999999999999999


Q ss_pred             eccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhCCCC
Q 022539          226 TALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGGVY  294 (295)
Q Consensus       226 ~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~~~~  294 (295)
                      +|+||+ ++|+||+++++|+++||+|+|||..  ++.+|||||+|+|.+|+.|+++++++|++++...+
T Consensus       223 ~tldG~-~~v~ip~~~~~g~~~rl~g~G~p~~--~~~~GDL~v~~~V~~P~~l~~~~~~~l~~l~~~~~  288 (291)
T PRK14299        223 MTLDGP-VEVTIPPRTQAGRKLRLKGKGWPRG--PAGRGDQYAEVRITIPTRPTPEEERLYKQLAELYK  288 (291)
T ss_pred             ECCCCC-EEEEeCCCcCCCCEEEECCCCCCCC--CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhhh
Confidence            999996 8999999999999999999999963  35789999999999999999999999999986544

>PRK14283 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.6e-62  Score=460.91  Aligned_cols=284  Identities=31%  Similarity=0.498  Sum_probs=233.6

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCCC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGT   81 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g~   81 (295)
                      .+|||++|||+++||.+|||+|||+||++||||+|++  ++|+++|++|++||++|+|+.+|++||+||++++.+.  +.
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~--~~   79 (378)
T PRK14283          4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGF--SQ   79 (378)
T ss_pred             cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccccc--cc
Confidence            4799999999999999999999999999999999985  4689999999999999999999999999999877521  11


Q ss_pred             CCCCCCCCC-Ccccc----CCCCCCC--CCCCCCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----C-----
Q 022539           82 PSYHHPHDT-KPCAT----RNNNNNN--HRAGGAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----H-----  145 (295)
Q Consensus        82 ~~~~~~~~~-~~f~~----~~~~~~~--f~~~~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g-----  145 (295)
                      .++|...+. ..|.+    ++.-|+.  |+++....++++.|+.+++.|||+|+|+|+++++.+.+.+.|    |     
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~fgg~~~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~~~  159 (378)
T PRK14283         80 EDIFNNINFEDIFQGFGFGIGNIFDMFGFGGGSRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEP  159 (378)
T ss_pred             cccccccCccccccccccchhhhccccccCCCCCCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCccccCC
Confidence            111111000 00111    0001111  222111224578899999999999999999999999776432    1     


Q ss_pred             ------------CCc---------------------------------------EEEEEEEEEEEeCCCCcCCCeEecCC
Q 022539          146 ------------FGK---------------------------------------PITVQEILKIDIKPGWKKGTKITFPE  174 (295)
Q Consensus       146 ------------~G~---------------------------------------~~~~~~~l~V~Ip~G~~~G~~i~~~g  174 (295)
                                  .|.                                       ++.+.++++|.||||+++|++|+|+|
T Consensus       160 ~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~g  239 (378)
T PRK14283        160 GSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSG  239 (378)
T ss_pred             CCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEEec
Confidence                        110                                       23455789999999999999999999


Q ss_pred             CCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCC
Q 022539          175 KGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEG  253 (295)
Q Consensus       175 ~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G  253 (295)
                      +|++.+ +..+|||+|+|++++|+.|+|+|+||++++.|||.+|++|+++.|+|+|| ++.|+||+++++|+++||+|+|
T Consensus       240 ~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tldG-~i~v~ip~g~~~g~~~ri~g~G  318 (378)
T PRK14283        240 EGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTIDG-PVELKIPAGTQSGTTFRLKGHG  318 (378)
T ss_pred             cccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCCc-eEEEEeCCCCCCCCEEEECCCC
Confidence            999864 56799999999999999999999999999999999999999999999999 5999999999999999999999


Q ss_pred             cCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          254 MPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       254 ~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                      ||... ...+|||||+|+|.||+.|+++|+++|++++.
T Consensus       319 ~p~~~-~~~~GdL~v~~~v~~P~~l~~~q~~ll~~~~~  355 (378)
T PRK14283        319 MPSLR-WSGKGNLYVKVKVVVPKKLSPKQKELLREFAS  355 (378)
T ss_pred             CCCCC-CCCCCCEEEEEEEEeCCCCCHHHHHHHHHHHh
Confidence            99765 34689999999999999999999999999985

>PRK14290 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.9e-62  Score=458.65  Aligned_cols=288  Identities=31%  Similarity=0.487  Sum_probs=236.1

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccC--
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASD--   78 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~--   78 (295)
                      |.+|||+||||+++||.+|||+|||+||++||||+|+++.++|+++|++|++||++|+|+.+|+.||+||+.++++++  
T Consensus         1 m~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~~~~   80 (365)
T PRK14290          1 MAKDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSN   80 (365)
T ss_pred             CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccCCCC
Confidence            789999999999999999999999999999999999865447899999999999999999999999999998875321  


Q ss_pred             CCCCCC--CCCCCCCccccCCCC-C--CCCCC-CCC-CCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----C--
Q 022539           79 FGTPSY--HHPHDTKPCATRNNN-N--NNHRA-GGA-GPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----H--  145 (295)
Q Consensus        79 ~g~~~~--~~~~~~~~f~~~~~~-~--~~f~~-~~~-~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g--  145 (295)
                      ++.++|  |.+. .+.|..+.++ +  +.|++ +.. ..++++.|+++.|.|||+|+|+|+++++.+.+.+.|    |  
T Consensus        81 ~~~~~~~~~~~~-~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G~g  159 (365)
T PRK14290         81 FNWDNFTHFSDI-NDIFNQIFGGNFGSDFFSGFGNQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTG  159 (365)
T ss_pred             ccccccccccch-hHHHHHHhcCccccccccccccccCCCCCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCcccc
Confidence            111111  1100 0112111000 0  00111 001 112347899999999999999999999999765432    1  


Q ss_pred             --------------CC---------------------------------------cEEEEEEEEEEEeCCCCcCCCeEec
Q 022539          146 --------------FG---------------------------------------KPITVQEILKIDIKPGWKKGTKITF  172 (295)
Q Consensus       146 --------------~G---------------------------------------~~~~~~~~l~V~Ip~G~~~G~~i~~  172 (295)
                                    .|                                       .++.+.++++|.||||+.+|++|+|
T Consensus       160 ~~~~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~  239 (365)
T PRK14290        160 AKNGKLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRV  239 (365)
T ss_pred             CCCCCCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeEccCCCCCCCCceeEEEeeEEEEEECCCCCCCcEEEE
Confidence                          11                                       1355678999999999999999999


Q ss_pred             CCCCCCCCCCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCC
Q 022539          173 PEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNE  252 (295)
Q Consensus       173 ~g~G~~~~~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~  252 (295)
                      +|+|++ +++.+|||+|+|++++|+.|+|+|+||+++++|||.+|++|+++.|+|++|+ ++|+||+++++|++++|+|+
T Consensus       240 ~g~G~~-~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~g~-i~V~Ip~g~~~g~~iri~g~  317 (365)
T PRK14290        240 KGKGQS-YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFREK-YNLKIPEGTQPGEVLKIKGA  317 (365)
T ss_pred             ccccCC-CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCCce-EEEEECCccCCCcEEEECCC
Confidence            999996 6788999999999999999999999999999999999999999999999995 99999999999999999999


Q ss_pred             CcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhCC
Q 022539          253 GMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG  292 (295)
Q Consensus       253 G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~~  292 (295)
                      |||.... ..+|||||+|+|.+|+.|+++++++|+++++.
T Consensus       318 G~p~~~~-~~~GDL~V~~~V~~P~~l~~~~~~ll~~~~~~  356 (365)
T PRK14290        318 GMPHLNG-HGSGDLLVRINVEVPKRLTSKQKELIREFFDI  356 (365)
T ss_pred             CCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHh
Confidence            9997652 46899999999999999999999999999873

>PRK10767 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.8e-62  Score=460.07  Aligned_cols=281  Identities=32%  Similarity=0.513  Sum_probs=234.9

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCC-C
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDF-G   80 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~-g   80 (295)
                      .+|||+||||+++||.+|||+|||+||++||||+|+.+ +.|+++|++|++||++|+|+.+|+.||+||++++..+.. +
T Consensus         3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~~~   81 (371)
T PRK10767          3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGD-KEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGGGG   81 (371)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCCCC
Confidence            47999999999999999999999999999999999754 468899999999999999999999999999988763211 1


Q ss_pred             C-CCC--CCCCCCCccccCCCCCCCCCCC---CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----CCC---
Q 022539           81 T-PSY--HHPHDTKPCATRNNNNNNHRAG---GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----HFG---  147 (295)
Q Consensus        81 ~-~~~--~~~~~~~~f~~~~~~~~~f~~~---~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g~G---  147 (295)
                      + +++  |.+...+.|+.      .|+++   +...++++.|+.+.|.|||+|+|+|+++++.+.+.+.|    |+|   
T Consensus        82 ~~~~~~~~~~~f~~~f~~------~fgg~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~C~G~G~~~  155 (371)
T PRK10767         82 GFGGGGGFGDIFGDIFGD------IFGGGRGGGRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKP  155 (371)
T ss_pred             CCCCccccccchhhhhhh------hccCCccccCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCCCCCcccCC
Confidence            1 010  11000011221      12211   11234578999999999999999999999999875431    111   


Q ss_pred             -------------------------------------------------cEEEEEEEEEEEeCCCCcCCCeEecCCCCCC
Q 022539          148 -------------------------------------------------KPITVQEILKIDIKPGWKKGTKITFPEKGNQ  178 (295)
Q Consensus       148 -------------------------------------------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~  178 (295)
                                                                       .++.+.++++|.||||+++|++|+|+|+|++
T Consensus       156 ~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~  235 (371)
T PRK10767        156 GTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEA  235 (371)
T ss_pred             CCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeECCCCCCCCCCCceEeeeeeEEEecCCCCCCCcEEEEecCccC
Confidence                                                             1345668899999999999999999999998


Q ss_pred             C-CCCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCC
Q 022539          179 E-PGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPIS  257 (295)
Q Consensus       179 ~-~~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~  257 (295)
                      . ++..+|||+|+|+++||+.|+|+|+||++++.|||++|++|+++.|+|+|| ++.|+||+++++|++++|+|+|||..
T Consensus       236 ~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG-~i~v~ip~g~~~g~~~~i~g~G~p~~  314 (371)
T PRK10767        236 GERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDG-RVKLKIPEGTQTGKLFRLRGKGVKSV  314 (371)
T ss_pred             CCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCC-cEEEEeCCCCCCCCEEEECCCCcCCC
Confidence            5 466799999999999999999999999999999999999999999999999 59999999999999999999999976


Q ss_pred             CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          258 KDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       258 ~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                      + .+.+|||||+|+|.+|+.|+++++++|++++.
T Consensus       315 ~-~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l~~  347 (371)
T PRK10767        315 R-SGARGDLYCQVVVETPVNLTKRQKELLEEFEE  347 (371)
T ss_pred             C-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            5 35689999999999999999999999999985

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=100.00  E-value=1.2e-61  Score=453.58  Aligned_cols=284  Identities=32%  Similarity=0.536  Sum_probs=233.3

Q ss_pred             CccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCC-CC
Q 022539            4 DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFG-TP   82 (295)
Q Consensus         4 d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g-~~   82 (295)
                      |||+||||+++||.+|||+|||+||++||||+|+.  ++++++|++|++||++|+|+.+|+.||+||+++++.+.++ ++
T Consensus         1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~   78 (354)
T TIGR02349         1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGG   78 (354)
T ss_pred             ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--ccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCC
Confidence            79999999999999999999999999999999973  4578999999999999999999999999999887643221 11


Q ss_pred             CCCCCCCCCccccCCCCC-CCCCCC----C--CCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----CCC----
Q 022539           83 SYHHPHDTKPCATRNNNN-NNHRAG----G--AGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----HFG----  147 (295)
Q Consensus        83 ~~~~~~~~~~f~~~~~~~-~~f~~~----~--~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g~G----  147 (295)
                      + |++.+.+.|+.+..-| ..|+++    .  ...+++++|+.+.|.|||+|+|+|+++++.+.|.+.|    |+|    
T Consensus        79 ~-~~~~~~~~~~~~~~~f~~~fg~~~g~~~~~~~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~  157 (354)
T TIGR02349        79 G-FNGFDIGFFGDFGDIFGDFFGGGGGSGRRRRSGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPG  157 (354)
T ss_pred             C-cCCccccCcCchhhhHHHHhccCcccCccccCCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCCCCCCCCCCCC
Confidence            1 1110000111000000 012211    0  1234578899999999999999999999999876432    111    


Q ss_pred             ----------------------------------------------------cEEEEEEEEEEEeCCCCcCCCeEecCCC
Q 022539          148 ----------------------------------------------------KPITVQEILKIDIKPGWKKGTKITFPEK  175 (295)
Q Consensus       148 ----------------------------------------------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~  175 (295)
                                                                          .++.+.+.++|.||||+++|++|+|+|+
T Consensus       158 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~  237 (354)
T TIGR02349       158 TDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSGK  237 (354)
T ss_pred             CCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCCCCCcEecccceEEEEECCCCCCCCEEEEecC
Confidence                                                                0345567899999999999999999999


Q ss_pred             CCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCc
Q 022539          176 GNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGM  254 (295)
Q Consensus       176 G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~  254 (295)
                      |++.+ +..+|||+|+|++++|+.|+|+|+||++++.|||++|++|+++.|+|+|| +++|.||+++++|++++|+|+||
T Consensus       238 G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ldG-~i~v~ip~g~~~g~~~~i~g~G~  316 (354)
T TIGR02349       238 GNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDG-DVKLKIPAGTQSGTVFRLKGKGV  316 (354)
T ss_pred             ccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCCc-eEEEEECCcccCCcEEEECCCCc
Confidence            99864 56789999999999999999999999999999999999999999999999 59999999999999999999999


Q ss_pred             CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhCC
Q 022539          255 PISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG  292 (295)
Q Consensus       255 p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~~  292 (295)
                      |.... ..+|||||+|+|.+|+.|+++|+++|+++|..
T Consensus       317 p~~~~-~~~GDL~i~~~v~~P~~l~~~~~~~l~~~~~~  353 (354)
T TIGR02349       317 PRLRG-NGRGDLLVTVKVETPKNLSKEQKELLEELAEA  353 (354)
T ss_pred             CCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence            97652 47899999999999999999999999999864

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=100.00  E-value=1.3e-60  Score=437.85  Aligned_cols=283  Identities=24%  Similarity=0.393  Sum_probs=232.7

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCC----CCc
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEG----LKA   76 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~----~~~   76 (295)
                      -.+|||++|||+++||.+|||+|||+||++||||+|++  +.++++|++|++||++|+||.+|+.||+||..+    +..
T Consensus         2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~--~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~~   79 (306)
T PRK10266          2 ELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE--PDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNR   79 (306)
T ss_pred             CcCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCccccc
Confidence            04899999999999999999999999999999999875  468999999999999999999999999998642    221


Q ss_pred             c-CCCCCCCCCCCCC-CccccCCCCCCCCCCC-CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEE-E
Q 022539           77 S-DFGTPSYHHPHDT-KPCATRNNNNNNHRAG-GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPIT-V  152 (295)
Q Consensus        77 ~-~~g~~~~~~~~~~-~~f~~~~~~~~~f~~~-~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~-~  152 (295)
                      + .+++++.|+..+. ..|+...+   .+++. ....++++.|+.+++.|||+|+|+||.+++.+.+.+|++.|.+.. .
T Consensus        80 ~~~~~~~~~~~~~~~~~~f~~~~g---~~~~~~~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~  156 (306)
T PRK10266         80 QFQHGDGQSFNAEDFDDIFSSIFG---QHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEI  156 (306)
T ss_pred             ccccCCCCCCCCCCHHHHHHHHhC---CCCCCCCCCCCCCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEee
Confidence            1 0111100111010 11111000   00100 112345688999999999999999999999999988887774322 2


Q ss_pred             EEEEEEEeCCCCcCCCeEecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCc
Q 022539          153 QEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGR  231 (295)
Q Consensus       153 ~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~  231 (295)
                      .++++|.||+|+++|++|+++|+|++.. +..+|||+|+|+++||+.|+|+|+||+++++||+.+|++|+++.|+|++|+
T Consensus       157 ~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~  236 (306)
T PRK10266        157 PKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKES  236 (306)
T ss_pred             eEEEEEEECCCCcCCcEEEEecCCcCCCCCCCCccEEEEEEEcCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCcc
Confidence            3579999999999999999999999864 567899999999999999999999999999999999999999999999997


Q ss_pred             EEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhCC
Q 022539          232 NLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGG  292 (295)
Q Consensus       232 ~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~~  292 (295)
                       +.|+||+++++|+++||+|+|||..+   .+|||||+|+|.+|+.|+++|+++|++++..
T Consensus       237 -v~v~ip~g~~~g~~~ri~g~G~p~~~---~~GdL~v~~~v~~P~~l~~~q~~l~~~l~~~  293 (306)
T PRK10266        237 -ILLTIPPGSQAGQRLRVKGKGLVSKK---QTGDLYAVLKIVMPPKPDEKTAALWQQLADA  293 (306)
T ss_pred             -EEEEeCCCcCCCCEEEECCCCCCCCC---CCCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence             89999999999999999999999643   5899999999999999999999999999864

>PRK14293 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=2.2e-60  Score=447.31  Aligned_cols=287  Identities=30%  Similarity=0.499  Sum_probs=233.8

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc-CC
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS-DF   79 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~-~~   79 (295)
                      |..|||+||||+++||.+|||+|||+||++||||+|++  +.|+++|++|++||++|+||.+|+.||+||+++++++ ++
T Consensus         1 ~~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~~~~   78 (374)
T PRK14293          1 MAADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE--PGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAGF   78 (374)
T ss_pred             CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--cCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccCCCc
Confidence            78999999999999999999999999999999999975  3588999999999999999999999999999877632 11


Q ss_pred             CC-CCC--CCCCCCCccccCCCCCCCCCCC-CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----C------
Q 022539           80 GT-PSY--HHPHDTKPCATRNNNNNNHRAG-GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----H------  145 (295)
Q Consensus        80 g~-~~~--~~~~~~~~f~~~~~~~~~f~~~-~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g------  145 (295)
                      ++ +++  |.+...+.|++++ +.+..+.+ ....+.++.|+++.|.|||+|+|+|+++++.+.|.+.|    |      
T Consensus        79 ~~~~~~~~~~d~f~~~fg~~~-~~~~~~~~~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~  157 (374)
T PRK14293         79 PDMGDMGGFADIFETFFSGFG-GAGGQGGRRRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPG  157 (374)
T ss_pred             CCcccccchHHHHHHHhcccC-CCCCCCccccccCccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCCCC
Confidence            11 111  1000001222100 00000000 01224568899999999999999999999999875422    1      


Q ss_pred             -----------CCc---------------------------------------EEEEEEEEEEEeCCCCcCCCeEecCCC
Q 022539          146 -----------FGK---------------------------------------PITVQEILKIDIKPGWKKGTKITFPEK  175 (295)
Q Consensus       146 -----------~G~---------------------------------------~~~~~~~l~V~Ip~G~~~G~~i~~~g~  175 (295)
                                 .|.                                       ++.+.++++|.||||+++|++|+|+|+
T Consensus       158 ~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~g~  237 (374)
T PRK14293        158 TGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGE  237 (374)
T ss_pred             CCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEccC
Confidence                       111                                       234456789999999999999999999


Q ss_pred             CCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCc
Q 022539          176 GNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGM  254 (295)
Q Consensus       176 G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~  254 (295)
                      |++.. +..+|||+|+|++++|+.|+|+|+||+++++|||.+|++|+++.|+|+||+ ++|+||+++++|+++||+|+||
T Consensus       238 G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG~-~~i~ip~~~~~g~~~ri~g~G~  316 (374)
T PRK14293        238 GDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGP-VELTIPAGTQPNTVLTLENKGV  316 (374)
T ss_pred             ccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCCC-EEEEeCCCCCCCCEEEECCCCC
Confidence            99864 567899999999999999999999999999999999999999999999997 8999999999999999999999


Q ss_pred             CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          255 PISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       255 p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                      |..+..+.+|||||+|+|.||+.|+++++++|++++.
T Consensus       317 p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l~~  353 (374)
T PRK14293        317 PRLGNPVARGDHLITVKVKIPTRISDEERELLEKLAK  353 (374)
T ss_pred             CCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            9765445689999999999999999999999999985

>PRK14289 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=8.4e-60  Score=445.22  Aligned_cols=286  Identities=31%  Similarity=0.540  Sum_probs=234.9

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccC---
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASD---   78 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~---   78 (295)
                      .+|||++|||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||++|+||.+|++||+||+++++.+.   
T Consensus         4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~~~~   82 (386)
T PRK14289          4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGD-KEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAGGG   82 (386)
T ss_pred             cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC-hHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCCCCC
Confidence            57999999999999999999999999999999999864 56899999999999999999999999999998775321   


Q ss_pred             -CCCCCCCCCCC-----CCccccCCCCCCC---CCCC-CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----
Q 022539           79 -FGTPSYHHPHD-----TKPCATRNNNNNN---HRAG-GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----  144 (295)
Q Consensus        79 -~g~~~~~~~~~-----~~~f~~~~~~~~~---f~~~-~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----  144 (295)
                       +++++ ++..+     ...|++..++++.   ++.+ ....+.++.|+++.|.|||+|+|+|+++++.+.+.+.|    
T Consensus        83 ~~~~~~-~~~~~~f~~f~~~fg~~~gg~~~~~~~~~~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~  161 (386)
T PRK14289         83 GFSGEG-MSMEDIFSMFGDIFGGHGGGFGGFGGFGGGGSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCH  161 (386)
T ss_pred             CCCCCC-cChhhhhHHhhhhhcccccCcccccccccccccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCC
Confidence             11111 11000     0112211001000   0100 01123468899999999999999999999999876432    


Q ss_pred             CCC--------------------------------------------------------cEEEEEEEEEEEeCCCCcCCC
Q 022539          145 HFG--------------------------------------------------------KPITVQEILKIDIKPGWKKGT  168 (295)
Q Consensus       145 g~G--------------------------------------------------------~~~~~~~~l~V~Ip~G~~~G~  168 (295)
                      |+|                                                        .++.+.++++|.||+|+++|+
T Consensus       162 G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~  241 (386)
T PRK14289        162 GTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGM  241 (386)
T ss_pred             CCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCCC
Confidence            111                                                        134566789999999999999


Q ss_pred             eEecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEE
Q 022539          169 KITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEV  247 (295)
Q Consensus       169 ~i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~  247 (295)
                      +|+++|+|++.. +..+|||+|+|++++|+.|+|+|+||++++.|||.+|++|+++.|+|++|+ ++|+||+++++|+++
T Consensus       242 ~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~  320 (386)
T PRK14289        242 QLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDGK-AKVKIEAGTQPGKVL  320 (386)
T ss_pred             EEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCce-EEEEECCccCCCcEE
Confidence            999999999874 677999999999999999999999999999999999999999999999996 899999999999999


Q ss_pred             EEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          248 VIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       248 rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                      ||+|+|||..+. +.+|||||+|+|.||+.|+++|+++|++++.
T Consensus       321 ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~q~~~l~~l~~  363 (386)
T PRK14289        321 RLRNKGLPSVNG-YGTGDLLVNVSVYIPETLSKEEKQTLEKMEN  363 (386)
T ss_pred             EECCCCcCCCCC-CCCCcEEEEEEEEeCCCCCHHHHHHHHHHHh
Confidence            999999997652 4689999999999999999999999999986

>PRK14292 chaperone protein DnaJ; Provisional

Probab=100.00  E-value=1.7e-59  Score=441.17  Aligned_cols=282  Identities=29%  Similarity=0.473  Sum_probs=230.6

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCCC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGT   81 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g~   81 (295)
                      +.|||++|||+++||.+|||+|||+||++||||+|++  .+|+++|++|++||++|+||.+|+.||+||+++..+...++
T Consensus         1 ~~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~--~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~~~~~   78 (371)
T PRK14292          1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGD   78 (371)
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--hhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccccCCc
Confidence            3699999999999999999999999999999999974  46889999999999999999999999999987642111000


Q ss_pred             --CCC-CCCCCCCccccCCCCCCCCCCC-CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----C--------
Q 022539           82 --PSY-HHPHDTKPCATRNNNNNNHRAG-GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----H--------  145 (295)
Q Consensus        82 --~~~-~~~~~~~~f~~~~~~~~~f~~~-~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g--------  145 (295)
                        +++ |+..  +.|..+.++. .++++ +...+.++.|+++.+.|||+|+|+|+++++.+.+.+.|    |        
T Consensus        79 ~~~~~~~d~~--d~f~~~fg~~-~~~~~~~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~  155 (371)
T PRK14292         79 PFGGMGFDPM--DIFEQLFGGA-GFGGGRGRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGK  155 (371)
T ss_pred             ccCccCCChH--HHHHHhhCCC-CcCCCCCcccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccCCCCC
Confidence              111 2110  1122110000 01100 01234578899999999999999999999999875421    1        


Q ss_pred             ----------CCc---------------------------------------EEEEEEEEEEEeCCCCcCCCeEecCCCC
Q 022539          146 ----------FGK---------------------------------------PITVQEILKIDIKPGWKKGTKITFPEKG  176 (295)
Q Consensus       146 ----------~G~---------------------------------------~~~~~~~l~V~Ip~G~~~G~~i~~~g~G  176 (295)
                                +|.                                       ++...++++|.||+|+++|++|+|+|+|
T Consensus       156 ~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~G~G  235 (371)
T PRK14292        156 PPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMG  235 (371)
T ss_pred             CCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEEecCc
Confidence                      110                                       2344578999999999999999999999


Q ss_pred             CCCCCCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCC
Q 022539          177 NQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPI  256 (295)
Q Consensus       177 ~~~~~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~  256 (295)
                      ++.+++. |||+|+|++++|+.|+|+|+||++++.|||.+|++|+++.|+|++|+ +.|+||+++++|++++|+|+|||.
T Consensus       236 ~~~~~~~-GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~~i~g~G~p~  313 (371)
T PRK14292        236 NEGPGGN-GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGP-QVIEVKPGTQHGDLHRLRGQGMPR  313 (371)
T ss_pred             CCCCCCC-CCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCCC-EEEecCCCcCCCcEEEECCCCCCC
Confidence            9977665 99999999999999999999999999999999999999999999997 589999999999999999999997


Q ss_pred             CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          257 SKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       257 ~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                      ... ..+|||||+|+|.+|+.|+++|+++|++++.
T Consensus       314 ~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~  347 (371)
T PRK14292        314 LQG-AGTGDLIVEYEIAVPKQLSPEAREALEAYAR  347 (371)
T ss_pred             CCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            652 4679999999999999999999999999985

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=6.6e-60  Score=427.49  Aligned_cols=270  Identities=42%  Similarity=0.693  Sum_probs=236.5

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCCC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGT   81 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g~   81 (295)
                      +..||+||||+++||.+|||+|||+||++||||+||+    +.++|++|++||||||||++|++||+||+++++.+++|+
T Consensus         3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~----~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~~   78 (337)
T KOG0712|consen    3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD----AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGGG   78 (337)
T ss_pred             ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc----HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCCC
Confidence            4689999999999999999999999999999999986    689999999999999999999999999999998766543


Q ss_pred             CCC-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCC----C----------
Q 022539           82 PSY-HHPHDTKPCATRNNNNNNHRAGGAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPDH----F----------  146 (295)
Q Consensus        82 ~~~-~~~~~~~~f~~~~~~~~~f~~~~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g----~----------  146 (295)
                      +.+ |+    .+|+        |++.+++...+++|+.+.+.|||+|+|.|.++++.++++++|.    .          
T Consensus        79 g~~~f~----~~F~--------~g~~~~~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGgksg~~~~C  146 (337)
T KOG0712|consen   79 GFGGFS----QFFG--------FGGNGGRGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGGKSGSAPKC  146 (337)
T ss_pred             CCccHH----Hhcc--------CCCcCccccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCCCCCCCCCC
Confidence            221 21    1222        2222223334499999999999999999999999998875520    0          


Q ss_pred             ------C------------------------------------------cEEEEEEEEEEEeCCCCcCCCeEecCCCCCC
Q 022539          147 ------G------------------------------------------KPITVQEILKIDIKPGWKKGTKITFPEKGNQ  178 (295)
Q Consensus       147 ------G------------------------------------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~  178 (295)
                            |                                          +++...+.++|.|++|++++++|.+.|++++
T Consensus       147 ~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~ki~f~geade  226 (337)
T KOG0712|consen  147 TTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQKITFKGEADE  226 (337)
T ss_pred             CCCCCCCceeEEEeccccccccceeEeccCCCccccccccccCcccccchhhhhhheeeccccCCCcccceeeeeeeeee
Confidence                  0                                          0456678899999999999999999999999


Q ss_pred             CCCCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCC--CCCCCcEEEEcCCCcCC
Q 022539          179 EPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTD--IIQPGSEVVIPNEGMPI  256 (295)
Q Consensus       179 ~~~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~--~~~~g~~~rl~g~G~p~  256 (295)
                      .++..+||+++.+..++|+.|.|.|+||++..+|++.||++|+.+.+.|+||+.+.+.+++  ++++|++++|+|+|||.
T Consensus       227 a~g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~~~v~~~gmp~  306 (337)
T KOG0712|consen  227 APGTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDTKRVEGEGMPI  306 (337)
T ss_pred             cCCCcCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCCceEEEecCCCceeChhHEEeecCCCccc
Confidence            9998999999999999999999999999999999999999999999999999999999876  79999999999999999


Q ss_pred             CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHh
Q 022539          257 SKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRAL  290 (295)
Q Consensus       257 ~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l  290 (295)
                      ..++  +|||||+|+|+||+ +++++...|+.+|
T Consensus       307 ~~~~--~g~lyi~~~v~fp~-~~~~~~~~l~~~l  337 (337)
T KOG0712|consen  307 FRNP--KGDLYIKFEVKFPK-LSPSQLKMLEDLL  337 (337)
T ss_pred             ccCC--CCcEEEEEEEEcCC-CChHHHHHHHhhC
Confidence            9865  99999999999999 9999999998875

>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.3e-43  Score=317.61  Aligned_cols=273  Identities=34%  Similarity=0.557  Sum_probs=221.3

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccC---
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASD---   78 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~---   78 (295)
                      ++|||+||||+++||..|||+||||||++||||+||++ +.|.+.|++|+.||||||||++|+.||+||++++...+   
T Consensus        15 ~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpdd-p~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~~~~   93 (336)
T KOG0713|consen   15 GRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDD-PNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDENKDG   93 (336)
T ss_pred             CCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhccccccc
Confidence            58999999999999999999999999999999999986 78999999999999999999999999999999998432   


Q ss_pred             CCCCCCCCCCCCCccccCCCCCC-CCCCCC-CCCCCCCCCeeeecccCHHHHhcCceeE----------EEEeEEeeC--
Q 022539           79 FGTPSYHHPHDTKPCATRNNNNN-NHRAGG-AGPKPTPTPIETQLLCTLEELYKGARKK----------MKISRVLPD--  144 (295)
Q Consensus        79 ~g~~~~~~~~~~~~f~~~~~~~~-~f~~~~-~~~~~~~~di~~~l~itl~e~~~G~~k~----------i~~~r~~~~--  144 (295)
                      .++.+.+     .+|+..++.|+ .+++.. ....+++.++...+..+++++|.|...+          +...+.++|  
T Consensus        94 ~~g~~~~-----~~f~~~f~dfg~~~~g~~~~e~~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~~~g~~~~~~~~  168 (336)
T KOG0713|consen   94 EGGGGGN-----DIFSAFFGDFGVTVGGNPLEEALPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKPAPGTRKCNCRL  168 (336)
T ss_pred             ccCCccc-----chHHHhhcccccccCCCcccCCCCCCceEEeehhhchhhhhcccHHHHHhccCceeecCcccccCChh
Confidence            1111101     12221111110 011111 1446778899999999999998886332          222222221  


Q ss_pred             -------CCC----------------cEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEEEEEeCCcceee
Q 022539          145 -------HFG----------------KPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQR  201 (295)
Q Consensus       145 -------g~G----------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i~v~~h~~f~r  201 (295)
                             +.|                +........++.+..|...|....+..+|.+..-+.+||+++.+..-+||.|.|
T Consensus       169 ~~~~~~~~~g~~~~~q~~~~~~~~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~gD~~f~~~~y~~~~~~~  248 (336)
T KOG0713|consen  169 EMFTQQEGPGRFQMLQEAVCDECPNVKLVLEEDPLEVEFERGDADGPEEIFELEGEPHIDGVPGDLFFKIVSYTHPRFER  248 (336)
T ss_pred             hheeeccCCChhhhhhhhhhccCCccceeecCCceeeeeeecccCCceeeeeccCCcceecccCCceeeeEEecccceec
Confidence                   112                145667789999999999999999999999888899999999999999999999


Q ss_pred             cCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCC-CCH
Q 022539          202 DGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSR-LTA  280 (295)
Q Consensus       202 ~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~-l~~  280 (295)
                      +++|+++++.+++.+++.|+...+.++|+..+.+....+..++..++.+++|||...+....|+++++|.+.+|.+ ++.
T Consensus       249 k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~~~~  328 (336)
T KOG0713|consen  249 KGDDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRKKITWPGARTRKKGEGMPLLKNRNEKGNLYVTFDVEFPKSSLSD  328 (336)
T ss_pred             CccchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhhccccchhhhhhhccchhhhccchhcceeEEecccCcccccch
Confidence            9999999999999999999999999999987888888899999999999999997666678899999999999965 555

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=100.00  E-value=5.2e-35  Score=284.81  Aligned_cols=157  Identities=17%  Similarity=0.167  Sum_probs=144.6

Q ss_pred             CeeeecccCHHHHhcCceeEEEEeEEeeCCCC-cEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEEEEEe
Q 022539          116 PIETQLLCTLEELYKGARKKMKISRVLPDHFG-KPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEK  194 (295)
Q Consensus       116 di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G-~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i~v~  194 (295)
                      ++...+.|||+++|+||+++|++.|.++|+.| +.+.+.++++|.||+|+++|++|+|+|+|++++++. |||+|+|+++
T Consensus       658 dI~y~l~vtLEeLY~G~tKkIKitR~V~~g~G~ktvkE~ktLeVkIPpGVkdGqkIRf~GeGDegpgg~-GDLyVvIkVK  736 (871)
T TIGR03835       658 NLVYEEEVPQILFFNNQIKEIKYTRHTVDGNTESTTNEAITLEIQLPITSQLNISAIFKGFGHDFGNGC-GDLKVVFKVI  736 (871)
T ss_pred             ceEEecccCHHHHhCCCeEEEEEEEeeccCCCcceeeeeEEEEEecCCCCCCCCEEEeccccCCCCCCC-CCEEEEEEEc
Confidence            57889999999999999999999999988776 456677899999999999999999999999876654 9999999999


Q ss_pred             CCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEE-
Q 022539          195 PHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIM-  273 (295)
Q Consensus       195 ~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~-  273 (295)
                      ||+.|+|+|+||++++.|+|.+||+|+++.|+|+||+ ++|+||+++++|+++||+|+|||..+  +.||||||+|+|. 
T Consensus       737 PHp~FrRdGdDL~~~v~ISL~EALLGgtIeIpTLDGr-VkLkIPpgTqpGqvLRIkGKGMP~~~--~~RGDLyV~f~V~~  813 (871)
T TIGR03835       737 PSNFFQIKNDGLHVAALVDPLVAYNGGIIDVFGPNKL-FNVRIPGGIKVNDQVIFKDLGLTKTK--YDKGSLIVHLYYSS  813 (871)
T ss_pred             CCCCeEEECCeEEEEEecCHHHHhcCCEEEeeCCCCC-EEEeeCCCCCCCcEEEECCCCCCCCC--CCCCCEEEEEEEee
Confidence            9999999999999999999999999999999999997 99999999999999999999999543  5689999999997 


Q ss_pred             CCC
Q 022539          274 FPS  276 (295)
Q Consensus       274 ~P~  276 (295)
                      +++
T Consensus       814 ~~k  816 (871)
T TIGR03835       814 VMK  816 (871)
T ss_pred             ccc
Confidence            454

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.96  E-value=2.2e-29  Score=228.07  Aligned_cols=188  Identities=30%  Similarity=0.491  Sum_probs=144.9

Q ss_pred             CccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCCCCCC
Q 022539            4 DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDFGTPS   83 (295)
Q Consensus         4 d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~g~~~   83 (295)
                      |||+||||+++|+..|||+||++||++||||.|.++  +|.++|++|.+|||+|+|+++|+.||++|..+..  .+++..
T Consensus        44 d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~--~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~~--~~~g~~  119 (288)
T KOG0715|consen   44 DYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDK--EASKKFKEISEAYEILSDEEKRQEYDVYGLEQHG--EFGGNP  119 (288)
T ss_pred             chhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCc--chhhHHHHHHHHHHHhcCHHHHHHHHHhhhhccc--cccCCc
Confidence            899999999999999999999999999999999874  7899999999999999999999999999987611  111100


Q ss_pred             CCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC-------------------
Q 022539           84 YHHPHDTKPCATRNNNNNNHRAGGAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD-------------------  144 (295)
Q Consensus        84 ~~~~~~~~~f~~~~~~~~~f~~~~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~-------------------  144 (295)
                       +     +.|..      .|++. ......+.+.++.+.++|++|..|+.+.+.+.....|                   
T Consensus       120 -~-----~~~~~------~~~~~-~~~~~~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~  186 (288)
T KOG0715|consen  120 -F-----DVFLE------FFGGK-MNKRVPDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFGSGAEEGAKRESCKT  186 (288)
T ss_pred             -c-----chHHH------hhccc-ccccccCcccccccccCHHHHhhccccceEEEeecccccccCcCcccccccccchh
Confidence             0     11110      01110 0112234566777888888888888777766543221                   


Q ss_pred             --------------------------------------CCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCcc
Q 022539          145 --------------------------------------HFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPAD  186 (295)
Q Consensus       145 --------------------------------------g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GD  186 (295)
                                                            |.| .+...+.+.|.+|+|+.++.+|++.+.|..       |
T Consensus       187 ~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~~~c~~~~g~~-~v~~~k~i~i~~~~g~~~~~~l~~~~~~~~-------~  258 (288)
T KOG0715|consen  187 CSGRGLVSNPKEDPFILYTCSYCLGRGLVLRDNCQACSGAG-QVRRAKDIMIVLPAGVRSADTLRFAGHGND-------D  258 (288)
T ss_pred             hhCcccccccccCCcceeecccccccceeccchHHHhhcch-hhhhheeEEeecCcccccccEEEEecCCcc-------e
Confidence                                                  111 345567899999999999999999998764       9


Q ss_pred             EEEEEEEeCCcceeecCCceEEEEEecHHH
Q 022539          187 LIFVVEEKPHAVFQRDGNDLVVNHKISLLE  216 (295)
Q Consensus       187 liv~i~v~~h~~f~r~g~DL~~~~~I~l~~  216 (295)
                      |.+++.|.+++.|+|+|.|+++++.|++.+
T Consensus       259 l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~  288 (288)
T KOG0715|consen  259 LFVRLIVAKSPSFRREGKDILYDAIISFTQ  288 (288)
T ss_pred             EEEEEEeccCcccccccCcccccccccccC
Confidence            999999999999999999999999998753

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.95  E-value=1.5e-26  Score=209.83  Aligned_cols=256  Identities=51%  Similarity=0.866  Sum_probs=200.4

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccCC-
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASDF-   79 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~-   79 (295)
                      |+.|||++|+|.++|+.++|++|||++|++||||+|+.+...+.++|++|.+||++|+|+.+|..||+||++++.+... 
T Consensus         1 ~~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~   80 (306)
T KOG0714|consen    1 MGKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSF   80 (306)
T ss_pred             CcccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCC
Confidence            7899999999999999999999999999999999998753356668999999999999999999999999977664211 


Q ss_pred             C---CCC--CCCCCC-----------CCccccC------------CCCCCCCC------CC-C---------CCCCCCCC
Q 022539           80 G---TPS--YHHPHD-----------TKPCATR------------NNNNNNHR------AG-G---------AGPKPTPT  115 (295)
Q Consensus        80 g---~~~--~~~~~~-----------~~~f~~~------------~~~~~~f~------~~-~---------~~~~~~~~  115 (295)
                      .   ..+  ++....           .++|...            ...+..++      .+ .         ........
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (306)
T KOG0714|consen   81 SSSFTSELFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRDKNAAPGEEAFKSEGKAFQSLYGPKRKQYDSSGSDRSARQSP  160 (306)
T ss_pred             CCCCCCCcceeccCchhhhHHHHhCCCCCCccccccCCccccccCccccccccccccccCCCcccccccccccccccCCC
Confidence            1   011  000000           0111100            00000000      00 0         01112233


Q ss_pred             CeeeecccCHHHHhcCceeEEEEeEEeeCCCCcE-EEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEEEEEe
Q 022539          116 PIETQLLCTLEELYKGARKKMKISRVLPDHFGKP-ITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEK  194 (295)
Q Consensus       116 di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~-~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i~v~  194 (295)
                      .+...+.+++++.+.|+.+...+.+......+.. ........+.+.++++.|+.+....+|+..++..|-++++.+..+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~f~~~~~  240 (306)
T KOG0714|consen  161 PVEHPLRVSLEDLYKGESKKMKISRQSFTSNGREGSSRSRYLSISIKPGWKEGTKITFPEEGDEEPGILPADIEFVVDEK  240 (306)
T ss_pred             CccCCcceeHHHhccccceeeecccccccCCcccccCccceeEEeccCCcccccceeccccccccCCcCcceeEEEEecC
Confidence            3666677799999999999999998877655543 455678899999999999999999999988888899999999999


Q ss_pred             CCcceeecCCceEEE--EEecHHHHhcCCEEEEeccCCcEEEEeeC-CCCCCCcEEEEcCCCcCC
Q 022539          195 PHAVFQRDGNDLVVN--HKISLLEALTGLSLNLTALDGRNLTLPVT-DIIQPGSEVVIPNEGMPI  256 (295)
Q Consensus       195 ~h~~f~r~g~DL~~~--~~I~l~~Al~G~~~~i~~l~g~~i~v~i~-~~~~~g~~~rl~g~G~p~  256 (295)
                      +|+.|.+.+.||...  ..|++.+|++|....++++++..+.+.+. ..+.++...+++++|+|.
T Consensus       241 ~~~~~~~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (306)
T KOG0714|consen  241 PHPLFSRDGNDLSYSSGYEISLKEALLGVTVFVPTLDGRSYSLSINKDLIEPGEEDVIPGEGLPC  305 (306)
T ss_pred             CcccccCCCccceecccceeehhhhhcCcceeeecccCccccCcccccccCCCceeeecCCCCCC
Confidence            999999999999999  99999999999999999999988888887 788999999999999985

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=99.89  E-value=2.6e-23  Score=154.29  Aligned_cols=81  Identities=40%  Similarity=0.680  Sum_probs=70.6

Q ss_pred             ceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHH
Q 022539          205 DLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKS  284 (295)
Q Consensus       205 DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~  284 (295)
                      ||+++++||+++|++|++++|+|++|++++|++|+++++|++++|+|+|||...+++.+|||||+|+|.+|++||++|++
T Consensus         1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~qk~   80 (81)
T PF01556_consen    1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSPEQKE   80 (81)
T ss_dssp             EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSHHHHH
T ss_pred             CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHhc
Confidence            89999999999999999999999999889999999999999999999999988765689999999999999999999998


Q ss_pred             H
Q 022539          285 D  285 (295)
Q Consensus       285 ~  285 (295)
                      +
T Consensus        81 l   81 (81)
T PF01556_consen   81 L   81 (81)
T ss_dssp             H
T ss_pred             C
Confidence            5

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.82  E-value=4.6e-21  Score=167.43  Aligned_cols=72  Identities=51%  Similarity=0.926  Sum_probs=68.6

Q ss_pred             CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCC
Q 022539            3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK   75 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   75 (295)
                      .|+|+||||+++|+.++||||||+||++||||+++++ +++.++|++||+||++|+||.+|..||.||+.++.
T Consensus        31 ~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~-P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~  102 (279)
T KOG0716|consen   31 LDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDN-PEATDKFKEINTAYAILSDPTKRNVYDEYGELGLK  102 (279)
T ss_pred             hHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCC-chhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHH
Confidence            5899999999999999999999999999999999986 68899999999999999999999999999988765

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.81  E-value=4.2e-19  Score=154.14  Aligned_cols=193  Identities=28%  Similarity=0.404  Sum_probs=135.4

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCC-CCCCCccCC
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYG-PEGLKASDF   79 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g-~~~~~~~~~   79 (295)
                      |..|||+||||+++|+..||++|||++|++||||+++.+...+.+.|+.|++||++|+|+.+|+.||+++ .........
T Consensus         4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~~~~~~~~~~~   83 (237)
T COG2214           4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIGADNYFPGKSY   83 (237)
T ss_pred             hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhcccccCccccc
Confidence            4579999999999999999999999999999999998753248899999999999999999999999973 322221110


Q ss_pred             CCCCCCCCCC---C-----CccccC------C--CCC--CCCCC----------CCC-CCCCCCC-CeeeecccCHHHHh
Q 022539           80 GTPSYHHPHD---T-----KPCATR------N--NNN--NNHRA----------GGA-GPKPTPT-PIETQLLCTLEELY  129 (295)
Q Consensus        80 g~~~~~~~~~---~-----~~f~~~------~--~~~--~~f~~----------~~~-~~~~~~~-di~~~l~itl~e~~  129 (295)
                      .....+....   .     ..+...      .  ...  ..+..          ... ....... +....+.+++.+++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (237)
T COG2214          84 RESAAFPIEGSLQLTGLYEEWRGKRNKTERKASLADLLSRGLSGLAAALSLFADEAALRSGSLRRRDLAANLADNFEEAL  163 (237)
T ss_pred             cccccccccccccHHHHHHhhcccccccccccchhhhcccccccccccccccccccccccccccccceeeeeeccHHHHh
Confidence            0000010000   0     000000      0  000  00000          000 0011111 57778889999999


Q ss_pred             cCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEEEEEeCCcceeecCCce
Q 022539          130 KGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDL  206 (295)
Q Consensus       130 ~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i~v~~h~~f~r~g~DL  206 (295)
                      .+....+....      .      ....+.+|.|+..+..+++.+.+.... ...++.+..+..++|+.|...++++
T Consensus       164 ~~~~~~~~~~~------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  227 (237)
T COG2214         164 AGVKKAVARLL------G------KALKSTIKAGALEGKALRLKGLLKSAR-GALGKARLKELSKRHPPFALEGDDK  227 (237)
T ss_pred             cCcceeeeccc------c------ccccccCCcccccCceeeecccCCcCC-CCcccceeeeeccCCCCccccCCcc
Confidence            99887776642      1      233489999999999999999988777 7789999999999999999999998

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.80  E-value=1.8e-20  Score=173.72  Aligned_cols=75  Identities=44%  Similarity=0.790  Sum_probs=70.4

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCC
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK   75 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   75 (295)
                      |++.||+||||.++|+..|||++||+||++||||+||+.-++|.++|+.|+.||+|||||..|+.||.+.++-+.
T Consensus         6 ~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~   80 (508)
T KOG0717|consen    6 KKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILR   80 (508)
T ss_pred             hhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhc
Confidence            578999999999999999999999999999999999988889999999999999999999999999997775554

>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.80  E-value=2.7e-20  Score=172.62  Aligned_cols=73  Identities=48%  Similarity=0.917  Sum_probs=68.6

Q ss_pred             CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--cHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCC
Q 022539            3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPAT--NQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK   75 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~--~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   75 (295)
                      .|||.+|+|+++||.+||++|||++++-||||+..++  ++.|++.|+.|.+||||||||.+|++||.||++|++
T Consensus         9 ~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~   83 (546)
T KOG0718|consen    9 IELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK   83 (546)
T ss_pred             hhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence            5899999999999999999999999999999997543  456999999999999999999999999999999998

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=99.77  E-value=3.3e-19  Score=178.41  Aligned_cols=75  Identities=32%  Similarity=0.600  Sum_probs=69.5

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASD   78 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~   78 (295)
                      .++||+||||+++||..+||+|||+||++||||+|+.+  .|.++|+.|++||+|||||.+|+.||+||..|+...+
T Consensus       572 d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~--~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~~~  646 (1136)
T PTZ00341        572 DTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKGVN  646 (1136)
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCCCC
Confidence            46999999999999999999999999999999999864  5788999999999999999999999999998877543

>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.76  E-value=2.4e-19  Score=161.63  Aligned_cols=74  Identities=46%  Similarity=0.806  Sum_probs=69.0

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCc
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKA   76 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~   76 (295)
                      ..|||+||||+.+|+..||++|||+.|++||||+||++ +.|.++|+.+.+||+||+|+.+|+.||++|..+...
T Consensus         4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~d-P~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~   77 (296)
T KOG0691|consen    4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGD-PQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSA   77 (296)
T ss_pred             cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCC-hHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccc
Confidence            46999999999999999999999999999999999987 459999999999999999999999999999876543

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=99.75  E-value=4e-19  Score=125.75  Aligned_cols=64  Identities=45%  Similarity=0.872  Sum_probs=59.9

Q ss_pred             CccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCcccccccc
Q 022539            4 DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYD   67 (295)
Q Consensus         4 d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd   67 (295)
                      |||+||||+++|+.++||+||+++++++|||+++.+...+.+.|..|++||++|+||.+|+.||
T Consensus         1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD   64 (64)
T PF00226_consen    1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD   64 (64)
T ss_dssp             HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence            6899999999999999999999999999999987653468899999999999999999999998

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=99.73  E-value=5.4e-18  Score=153.04  Aligned_cols=73  Identities=45%  Similarity=0.779  Sum_probs=65.8

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--cHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPAT--NQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK   75 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~--~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   75 (295)
                      .+|||+||||.++|+..||.||||++|.+||||...+.  +..|+++|-.|..|-|||+||++|+.||. |++.+.
T Consensus       393 kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDn-GeDPLD  467 (504)
T KOG0624|consen  393 KRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDN-GEDPLD  467 (504)
T ss_pred             cchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccC-CCCCCC
Confidence            37999999999999999999999999999999998653  23589999999999999999999999998 666655

>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.72  E-value=2.9e-18  Score=146.55  Aligned_cols=73  Identities=40%  Similarity=0.710  Sum_probs=66.3

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCC-CcHHHHHHHHHHHHHhhhcCCccccccccCCCCCC
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPA-TNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEG   73 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~-~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~   73 (295)
                      |-+|+|+||||.++|+..+|++|||+||++||||+++. +..+|.++|+.++.||.||+|.++|+.||+.|.-.
T Consensus        12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~id   85 (264)
T KOG0719|consen   12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSID   85 (264)
T ss_pred             cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCC
Confidence            34699999999999999999999999999999999963 23579999999999999999999999999988643

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=99.69  E-value=4.4e-17  Score=113.64  Aligned_cols=60  Identities=60%  Similarity=1.034  Sum_probs=54.7

Q ss_pred             CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccc
Q 022539            3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRK   62 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~   62 (295)
                      +|||+||||+++++.++||+||+++++++|||+++...+.+.+.|.+|++||++|+||.+
T Consensus         1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~~   60 (60)
T smart00271        1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK   60 (60)
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCCC
Confidence            489999999999999999999999999999999975335788999999999999999853

>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.66  E-value=5.8e-17  Score=137.49  Aligned_cols=69  Identities=41%  Similarity=0.798  Sum_probs=64.4

Q ss_pred             CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCC
Q 022539            3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPE   72 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~   72 (295)
                      .|+|+||||++.||.+|||+|||+|+++||||++|.. .+.++.|..|++||+.|+|+..|..|..||+.
T Consensus        99 fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~-~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~P  167 (230)
T KOG0721|consen   99 FDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPE-EGDEEFFEAIAKAYQALTDKKSRENWEKYGNP  167 (230)
T ss_pred             CCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCc-chhHHHHHHHHHHHHHhcchhhHHHHHHhCCC
Confidence            5999999999999999999999999999999999764 45788899999999999999999999999974

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=99.66  E-value=7.8e-17  Score=158.32  Aligned_cols=71  Identities=48%  Similarity=0.870  Sum_probs=66.2

Q ss_pred             CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCC
Q 022539            3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK   75 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   75 (295)
                      +|||+||||+++|+.++||+|||+||++||||+++.  ..+.++|++|++||++|+||.+|+.||.||..+..
T Consensus         2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~--~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~d   72 (871)
T TIGR03835         2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA--PDAASIFAEINEANDVLSNPKKRANYDKYGHDGVD   72 (871)
T ss_pred             CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccccc
Confidence            699999999999999999999999999999999976  46788999999999999999999999999986653

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>PHA03102 Small T antigen; Reviewed

Probab=99.66  E-value=6.5e-17  Score=132.70  Aligned_cols=68  Identities=22%  Similarity=0.307  Sum_probs=62.5

Q ss_pred             CCccceecCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCC
Q 022539            3 VDYYNILKVSRGA--TEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK   75 (295)
Q Consensus         3 ~d~Y~iLgv~~~a--~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   75 (295)
                      +.+|+||||+++|  |.++||+|||++|+++|||++++     .++|++|++||++|+|+.+|..||.+|.+...
T Consensus         5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~-----~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~   74 (153)
T PHA03102          5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD-----EEKMKELNTLYKKFRESVKSLRDLDGEEDSSS   74 (153)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch-----hHHHHHHHHHHHHHhhHHHhccccccCCcccc
Confidence            3579999999999  99999999999999999999864     47999999999999999999999999987654

>cd06257 DnaJ DnaJ domain or J-domain

Probab=99.66  E-value=2.1e-16  Score=108.19  Aligned_cols=55  Identities=58%  Similarity=1.034  Sum_probs=51.5

Q ss_pred             CccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCC
Q 022539            4 DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSD   59 (295)
Q Consensus         4 d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d   59 (295)
                      |||++|||+++++.++||++||+|++++|||+++.. +.+.+.|..|++||++|+|
T Consensus         1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~-~~~~~~~~~l~~Ay~~L~d   55 (55)
T cd06257           1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD   55 (55)
T ss_pred             ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHhcC
Confidence            799999999999999999999999999999999753 4688999999999999986

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=99.54  E-value=5.3e-15  Score=123.92  Aligned_cols=67  Identities=28%  Similarity=0.431  Sum_probs=58.2

Q ss_pred             CCCccceecCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHHHHHHHhhhcCCccccccccC
Q 022539            2 GVDYYNILKVSRG--ATEDDLKKSYKRLAMKWHPDKNPATN--QQAEAKFKLISEAYDVLSDPRKRQIYDL   68 (295)
Q Consensus         2 ~~d~Y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~~--~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (295)
                      +.|||++|||++.  ++..+|+++||+|++++|||++....  ..+.+.|..||+||++|+||.+|+.|+.
T Consensus         1 ~~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL   71 (166)
T PRK01356          1 MQNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYML   71 (166)
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            4799999999996  78999999999999999999986421  2244568999999999999999999985

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=99.54  E-value=7.6e-15  Score=123.69  Aligned_cols=66  Identities=29%  Similarity=0.504  Sum_probs=58.1

Q ss_pred             CCccceecCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHHHHHHHhhhcCCccccccccC
Q 022539            3 VDYYNILKVSRG--ATEDDLKKSYKRLAMKWHPDKNPATNQ----QAEAKFKLISEAYDVLSDPRKRQIYDL   68 (295)
Q Consensus         3 ~d~Y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~~~----~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (295)
                      +|||++|||++.  ++..+|+++||++++++|||+.+...+    .+.+.|..||+||++|+||.+|+.|+.
T Consensus         1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll   72 (171)
T PRK05014          1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL   72 (171)
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence            399999999995  788999999999999999999764322    367799999999999999999999984

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=99.46  E-value=6.4e-14  Score=118.44  Aligned_cols=67  Identities=28%  Similarity=0.404  Sum_probs=57.8

Q ss_pred             CCCccceecCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHHHHHHHhhhcCCccccccccC
Q 022539            2 GVDYYNILKVSRG--ATEDDLKKSYKRLAMKWHPDKNPATNQ----QAEAKFKLISEAYDVLSDPRKRQIYDL   68 (295)
Q Consensus         2 ~~d~Y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~~~----~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (295)
                      ..|||++|||++.  ++..+|+++||+|++++|||+++....    .+.+.+..||+||++|+||.+|+.|+.
T Consensus         5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll   77 (176)
T PRK03578          5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLL   77 (176)
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHH
Confidence            4699999999995  688999999999999999999864321    245567999999999999999999994

>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.46  E-value=1.8e-14  Score=124.80  Aligned_cols=65  Identities=34%  Similarity=0.654  Sum_probs=60.9

Q ss_pred             CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCC
Q 022539            3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLY   69 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~   69 (295)
                      .|.|+||||+++|+.+||.+|||+||++||||++++  +++.+.|+.|..||++|.|...|..||-+
T Consensus        33 enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~--~e~k~~F~~iAtayeilkd~e~rt~ydya   97 (329)
T KOG0722|consen   33 ENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD--PESKKLFVKIATAYEILKDNETRTQYDYA   97 (329)
T ss_pred             hhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC--chhhhhhhhhhcccccccchhhHHhHHHH
Confidence            589999999999999999999999999999999986  46779999999999999999999999964

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=99.45  E-value=9.6e-14  Score=116.90  Aligned_cols=67  Identities=25%  Similarity=0.396  Sum_probs=59.3

Q ss_pred             CCCccceecCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCc----HHHHHHHHHHHHHhhhcCCccccccccC
Q 022539            2 GVDYYNILKVSRG--ATEDDLKKSYKRLAMKWHPDKNPATN----QQAEAKFKLISEAYDVLSDPRKRQIYDL   68 (295)
Q Consensus         2 ~~d~Y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (295)
                      ..|||++|||++.  .+..+|+++||+|++++|||++....    ..+.+.|..||+||++|+||.+|+.|+.
T Consensus         3 ~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL   75 (173)
T PRK00294          3 TPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL   75 (173)
T ss_pred             CCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence            5799999999996  67899999999999999999986432    2367789999999999999999999994

>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.44  E-value=4.1e-14  Score=130.56  Aligned_cols=66  Identities=52%  Similarity=0.891  Sum_probs=63.7

Q ss_pred             CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccC
Q 022539            3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDL   68 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (295)
                      +|||.|||++++|+..|||+|||++|+.||||++..++.+++.+|+++-+||.+|+||.+|..||.
T Consensus       373 kd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~ds  438 (486)
T KOG0550|consen  373 KDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDS  438 (486)
T ss_pred             hhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhccc
Confidence            699999999999999999999999999999999987767899999999999999999999999997

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=99.38  E-value=4.2e-13  Score=104.73  Aligned_cols=51  Identities=27%  Similarity=0.457  Sum_probs=46.5

Q ss_pred             CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcC
Q 022539            3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLS   58 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~   58 (295)
                      .++|++|||+++||.+|||++||+|++++|||++.+     .+.|++|++||++|.
T Consensus        65 ~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgGs-----~~~~~kIneAyevL~  115 (116)
T PTZ00100         65 SEAYKILNISPTASKERIREAHKQLMLRNHPDNGGS-----TYIASKVNEAKDLLL  115 (116)
T ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHHh
Confidence            489999999999999999999999999999999642     468999999999985

>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.36  E-value=3.4e-13  Score=125.76  Aligned_cols=66  Identities=41%  Similarity=0.631  Sum_probs=62.2

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLY   69 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~   69 (295)
                      ..|.|.+|||++++|+++||+.||++|...|||||-.  +.|+|.|+.++.|||+|+|+.+|..||.-
T Consensus       234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~--~~A~Eafk~Lq~Afevig~~~kR~eYd~e  299 (490)
T KOG0720|consen  234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMI--PRAEEAFKKLQVAFEVIGDSVKRKEYDLE  299 (490)
T ss_pred             CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCC--hhHHHHHHHHHHHHHHhcchhhhhHHHHH
Confidence            3699999999999999999999999999999999974  57999999999999999999999999973

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=99.29  E-value=2e-12  Score=116.57  Aligned_cols=57  Identities=32%  Similarity=0.563  Sum_probs=50.8

Q ss_pred             CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------cHHHHHHHHHHHHHhhhcCC
Q 022539            3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPAT------NQQAEAKFKLISEAYDVLSD   59 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~------~~~~~~~f~~i~~Ay~~L~d   59 (295)
                      .|+|++|||+++||.+|||+|||+|+++||||++.+.      .+.+.++|++|++||++|+.
T Consensus       200 ~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~  262 (267)
T PRK09430        200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK  262 (267)
T ss_pred             HhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999996431      14588999999999999975

>PHA02624 large T antigen; Provisional

Probab=99.28  E-value=2.2e-12  Score=125.81  Aligned_cols=59  Identities=25%  Similarity=0.387  Sum_probs=55.4

Q ss_pred             CCccceecCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccc
Q 022539            3 VDYYNILKVSRGA--TEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIY   66 (295)
Q Consensus         3 ~d~Y~iLgv~~~a--~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~y   66 (295)
                      +++|++|||+++|  +.++||+|||++|++||||++.+     .++|++|++||++|+|+.+|..|
T Consensus        11 ~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd-----eekfk~Ln~AYevL~d~~k~~r~   71 (647)
T PHA02624         11 KELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD-----EEKMKRLNSLYKKLQEGVKSARQ   71 (647)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc-----HHHHHHHHHHHHHHhcHHHhhhc
Confidence            4799999999999  99999999999999999999743     57999999999999999999998

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=99.21  E-value=5.3e-12  Score=117.37  Aligned_cols=70  Identities=41%  Similarity=0.764  Sum_probs=64.6

Q ss_pred             CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCC----CcHHHHHHHHHHHHHhhhcCCccccccccCCCCC
Q 022539            3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPA----TNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPE   72 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~----~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~   72 (295)
                      -|+|+|||++.+++..+||++||+|+.|+|||+-+.    ..++.++.+++|++||+.|+|...|+.|-.||.-
T Consensus        98 fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtP  171 (610)
T COG5407          98 FDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTP  171 (610)
T ss_pred             CChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCC
Confidence            599999999999999999999999999999999764    2467899999999999999999999999999863

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=99.17  E-value=3.4e-11  Score=101.45  Aligned_cols=67  Identities=19%  Similarity=0.253  Sum_probs=58.6

Q ss_pred             CCCccceecCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCc----HHHHHHHHHHHHHhhhcCCccccccccC
Q 022539            2 GVDYYNILKVSRG--ATEDDLKKSYKRLAMKWHPDKNPATN----QQAEAKFKLISEAYDVLSDPRKRQIYDL   68 (295)
Q Consensus         2 ~~d~Y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (295)
                      ++|||++|||++.  .+..+++++||+|.+++|||+.....    ..+.+....||+||.+|+||.+|+.|=-
T Consensus         1 ~~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL   73 (173)
T PRK01773          1 MNNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAII   73 (173)
T ss_pred             CCChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHH
Confidence            4799999999995  89999999999999999999975432    2366678999999999999999999864

>PRK14299 chaperone protein DnaJ; Provisional

Probab=99.08  E-value=5.2e-10  Score=102.28  Aligned_cols=73  Identities=19%  Similarity=0.309  Sum_probs=65.7

Q ss_pred             eeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCC
Q 022539          199 FQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRL  278 (295)
Q Consensus       199 f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l  278 (295)
                      +.|+|.|+++++.|||.||++|+++.| +++|++++|+||+++++|++++++|+|++.       |||||+|+|.-++.+
T Consensus       125 ~~~~g~dl~~~l~isL~ea~~G~~~~i-~l~g~~~~V~Ip~G~~~G~~ir~~g~G~~~-------GDL~v~i~v~~h~~f  196 (291)
T PRK14299        125 RARKGRDLEAELPLTLEEAYRGGEKVV-EVAGERLSVRIPPGVREGQVIRLAGKGRQG-------GDLYLVVRLLPHPVF  196 (291)
T ss_pred             CCCCCCCEEEEEEecHHHHhCCCeEEE-eeCCEEEEEecCCCcCCCcEEEECCCCCCC-------CCEEEEEEEcCCCCe
Confidence            347799999999999999999999998 678888999999999999999999999862       999999999977765


Q ss_pred             C
Q 022539          279 T  279 (295)
Q Consensus       279 ~  279 (295)
                      .
T Consensus       197 ~  197 (291)
T PRK14299        197 R  197 (291)
T ss_pred             E
Confidence            4

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=99.04  E-value=2.8e-10  Score=94.63  Aligned_cols=55  Identities=29%  Similarity=0.438  Sum_probs=47.5

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCCCCC----cHHHHHHHHHHHHHhhhcCCccccccccC
Q 022539           14 GATEDDLKKSYKRLAMKWHPDKNPAT----NQQAEAKFKLISEAYDVLSDPRKRQIYDL   68 (295)
Q Consensus        14 ~a~~~eIk~ayr~la~~~hPd~~~~~----~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (295)
                      +.+..+|+++||+|++++|||+.+..    +..+.+.|..||+||++|+||.+|+.|+.
T Consensus         2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL   60 (157)
T TIGR00714         2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYML   60 (157)
T ss_pred             CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence            35789999999999999999996532    22377899999999999999999999996

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.03  E-value=3.7e-10  Score=106.58  Aligned_cols=85  Identities=16%  Similarity=0.155  Sum_probs=74.4

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC-CCCCccEEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFV  190 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~  190 (295)
                      +++.|+.+++.|||.||+.|+++.|...      +|      +.++|.||+|+++|++++++|+|.+.. +..+|||+|+
T Consensus       273 r~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG------~~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~  340 (369)
T PRK14282        273 RSGSDLIYDVTIDYLQAILGTTVEVPLP------EG------GTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVN  340 (369)
T ss_pred             EecCCEEEEEEeCHHHHhCCCEEEEeCC------CC------cEEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEE
Confidence            4678999999999999999999888764      55      368999999999999999999999864 4468999999


Q ss_pred             EEEeCCcceeecCCceEE
Q 022539          191 VEEKPHAVFQRDGNDLVV  208 (295)
Q Consensus       191 i~v~~h~~f~r~g~DL~~  208 (295)
                      |.+..|+.|++++.+|+.
T Consensus       341 ~~v~~P~~l~~~~~~ll~  358 (369)
T PRK14282        341 VHVEIPKRLSREERKLLK  358 (369)
T ss_pred             EEEECCCCCCHHHHHHHH
Confidence            999999999998887753

>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress

Probab=98.99  E-value=6.5e-10  Score=82.27  Aligned_cols=72  Identities=25%  Similarity=0.346  Sum_probs=56.2

Q ss_pred             CeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC-C-CCCccEEEEEEE
Q 022539          116 PIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP-G-LPPADLIFVVEE  193 (295)
Q Consensus       116 di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~-~~~GDliv~i~v  193 (295)
                      |+.+++.|||.||+.|+++++...      +|      +.++|.||+|+++|+.++++|+|.+.. + ...|||+|++++
T Consensus         1 DL~~~~~I~l~~al~G~~i~i~~l------~g------~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V   68 (81)
T PF01556_consen    1 DLYCTIPISLKEALLGGTISIPTL------DG------KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEV   68 (81)
T ss_dssp             EEEEEEEEEHHHHHH-EEEEEE-T------TS-------EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEE
T ss_pred             CeEEEEEeCHHHHhCCCEEEEECC------CC------CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEE
Confidence            578999999999999999888665      56      479999999999999999999999753 3 369999999999


Q ss_pred             eCCcce
Q 022539          194 KPHAVF  199 (295)
Q Consensus       194 ~~h~~f  199 (295)
                      .-+..+
T Consensus        69 ~~P~~l   74 (81)
T PF01556_consen   69 EFPKKL   74 (81)
T ss_dssp             E--SST
T ss_pred             ECCCCC
Confidence            855443

The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....

>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.98  E-value=3.6e-10  Score=95.00  Aligned_cols=66  Identities=29%  Similarity=0.643  Sum_probs=59.9

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCcccccccc
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYD   67 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd   67 (295)
                      +-|+|+||.|.+..+.++||+.||+|++..|||+|+++.+.|...|..+.+||..|-|+..|...+
T Consensus        52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~~  117 (250)
T KOG1150|consen   52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRCL  117 (250)
T ss_pred             ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            468999999999999999999999999999999999987789999999999999999987554433

>PRK14290 chaperone protein DnaJ; Provisional

Probab=98.92  E-value=1.5e-09  Score=102.25  Aligned_cols=85  Identities=11%  Similarity=0.135  Sum_probs=74.3

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIFV  190 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv~  190 (295)
                      +.+.|+.+.+.|||.||+.|+++.|...      .|       .++|.||+|+++|++++++|+|.+.++ ..+|||+|+
T Consensus       267 R~G~DL~~~~~Isl~eAl~G~~~~I~~~------~g-------~i~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~  333 (365)
T PRK14290        267 RINDDLYVDQKINFPQAALGGEIEIKLF------RE-------KYNLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLVR  333 (365)
T ss_pred             EecCCEEEEEEeCHHHHhCCCEEEEEcC------Cc-------eEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEE
Confidence            4578999999999999999999988763      33       589999999999999999999998654 358999999


Q ss_pred             EEEeCCcceeecCCceEEE
Q 022539          191 VEEKPHAVFQRDGNDLVVN  209 (295)
Q Consensus       191 i~v~~h~~f~r~g~DL~~~  209 (295)
                      |++..++.|++++.+|+.+
T Consensus       334 ~~V~~P~~l~~~~~~ll~~  352 (365)
T PRK14290        334 INVEVPKRLTSKQKELIRE  352 (365)
T ss_pred             EEEECCCCCCHHHHHHHHH
Confidence            9999999999988877654

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=98.90  E-value=6.7e-10  Score=97.42  Aligned_cols=67  Identities=39%  Similarity=0.574  Sum_probs=59.1

Q ss_pred             CCccceecCCC---CCCHHHHHHHHHHHHHHhCCCCCCCC-cHHHHHHHHHHHHHhhhcCCccccccccCC
Q 022539            3 VDYYNILKVSR---GATEDDLKKSYKRLAMKWHPDKNPAT-NQQAEAKFKLISEAYDVLSDPRKRQIYDLY   69 (295)
Q Consensus         3 ~d~Y~iLgv~~---~a~~~eIk~ayr~la~~~hPd~~~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~   69 (295)
                      .|+|.+|||+.   .|++.+|.+|+++...+||||+..+. .....+.|+.|+.||++|+|+.+|.+||..
T Consensus        43 ~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~  113 (379)
T COG5269          43 VDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSN  113 (379)
T ss_pred             hhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcccc
Confidence            58999999988   78999999999999999999997321 124678999999999999999999999974

>PRK14294 chaperone protein DnaJ; Provisional

Probab=98.90  E-value=2.4e-09  Score=100.95  Aligned_cols=85  Identities=18%  Similarity=0.191  Sum_probs=73.1

Q ss_pred             CCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEE
Q 022539          111 KPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIF  189 (295)
Q Consensus       111 ~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv  189 (295)
                      .+++.|+++++.|||.||+.|+++.|...      +|       .++|.||+|+++|++++++|+|.+.++ ..+|||+|
T Consensus       260 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~iri~G~G~p~~~~~~~GDL~V  326 (366)
T PRK14294        260 ERDGNDVHCKVPISFVQAALGAQIEVPTL------EG-------ERELKIPKGTQPGDIFRFKGKGIPSLRGGGRGDQII  326 (366)
T ss_pred             eecCCCEEEEEEeCHHHHhCCCeEEEECC------CC-------cEEEEECCCcCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence            35688999999999999999999888864      45       369999999999999999999998654 35899999


Q ss_pred             EEEEeCCcceeecCCceEE
Q 022539          190 VVEEKPHAVFQRDGNDLVV  208 (295)
Q Consensus       190 ~i~v~~h~~f~r~g~DL~~  208 (295)
                      +|++..|+.|.+...+|+.
T Consensus       327 ~~~v~~P~~l~~~q~~ll~  345 (366)
T PRK14294        327 EVEVKVPTRLTKKQEELLT  345 (366)
T ss_pred             EEEEECCCCCCHHHHHHHH
Confidence            9999999999887766643

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=98.89  E-value=8.2e-09  Score=95.09  Aligned_cols=77  Identities=18%  Similarity=0.331  Sum_probs=63.1

Q ss_pred             ecCCceEEEEEecHHHHhcCCEEEE----eccC--C-------cEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEE
Q 022539          201 RDGNDLVVNHKISLLEALTGLSLNL----TALD--G-------RNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLI  267 (295)
Q Consensus       201 r~g~DL~~~~~I~l~~Al~G~~~~i----~~l~--g-------~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~  267 (295)
                      +.|.|+++.+.|+|.||++|+...|    ++++  |       ++++|+||+++++|++++++|+|+|... ...+||||
T Consensus       115 ~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~~GDl~  193 (306)
T PRK10266        115 ARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGEN-GGPNGDLW  193 (306)
T ss_pred             CCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCC-CCCCccEE
Confidence            4689999999999999999996544    4444  3       4689999999999999999999999654 35689999


Q ss_pred             EEEEEECCCCC
Q 022539          268 IKFDIMFPSRL  278 (295)
Q Consensus       268 v~~~v~~P~~l  278 (295)
                      |+|+|.-.+.+
T Consensus       194 v~i~v~ph~~f  204 (306)
T PRK10266        194 LVIHIAPHPLF  204 (306)
T ss_pred             EEEEEcCCCCe
Confidence            99999943333

>PRK14285 chaperone protein DnaJ; Provisional

Probab=98.88  E-value=2.8e-09  Score=100.42  Aligned_cols=83  Identities=16%  Similarity=0.189  Sum_probs=71.9

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCC-CCccEEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGL-PPADLIFV  190 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~GDliv~  190 (295)
                      +.+.|+..++.|||.||+.|+++.|...      +|      +.++|.||+|+++|++++++|+|.+.++. ..|||+|+
T Consensus       263 R~G~dL~~~~~Isl~eAl~G~~~~i~tl------dG------~~v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~  330 (365)
T PRK14285        263 RNGKDLYATLPISFTQAALGKEIKIQTI------AS------KKIKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILI  330 (365)
T ss_pred             EeccceEEEEecCHHHHhCCCEEEEECC------CC------CEEEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEE
Confidence            4578999999999999999999888875      55      36899999999999999999999986544 46999999


Q ss_pred             EEEeCCcceeecCCce
Q 022539          191 VEEKPHAVFQRDGNDL  206 (295)
Q Consensus       191 i~v~~h~~f~r~g~DL  206 (295)
                      |++..|+.|.+++..+
T Consensus       331 ~~v~~P~~l~~~q~~~  346 (365)
T PRK14285        331 IKIKTPKNLNSNAIKL  346 (365)
T ss_pred             EEEECCCCCCHHHHHH
Confidence            9999999988876544

>PRK14289 chaperone protein DnaJ; Provisional

Probab=98.82  E-value=1.4e-08  Score=96.54  Aligned_cols=83  Identities=18%  Similarity=0.268  Sum_probs=69.6

Q ss_pred             cCCceEEEEEecHHHHhcCCEEEEecc-----------------------------------------------------
Q 022539          202 DGNDLVVNHKISLLEALTGLSLNLTAL-----------------------------------------------------  228 (295)
Q Consensus       202 ~g~DL~~~~~I~l~~Al~G~~~~i~~l-----------------------------------------------------  228 (295)
                      .|.|+.+.+.|||.|++.|++.+|...                                                     
T Consensus       126 ~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G  205 (386)
T PRK14289        126 RGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNG  205 (386)
T ss_pred             CCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCc
Confidence            488999999999999999998766431                                                     


Q ss_pred             -------------------CCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
Q 022539          229 -------------------DGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSD  285 (295)
Q Consensus       229 -------------------~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~  285 (295)
                                         +.++++|.||+++++|++++|+|+|+|... ...+|||||+|+|..|+.++.+..++
T Consensus       206 ~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~~GDL~v~v~v~~~~~f~r~g~DL  280 (386)
T PRK14289        206 EGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQLSMNGKGNAGKH-GGVNGDLLVVIEEEPHPELIRDENDL  280 (386)
T ss_pred             cccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCCCEEEEeccccCCCC-CCCCccEEEEEEEecCCcccccccce
Confidence                               113588999999999999999999998643 24689999999999999988777665

>PRK10767 chaperone protein DnaJ; Provisional

Probab=98.82  E-value=5.9e-09  Score=98.55  Aligned_cols=85  Identities=14%  Similarity=0.157  Sum_probs=73.2

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC-CCCCccEEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFV  190 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~  190 (295)
                      +.+.|+..++.|||.+|+.|+++.|...      +|       .++|.||+|+++|++++++|+|.+.. +...|||||+
T Consensus       259 R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~  325 (371)
T PRK10767        259 RDGNDLYCEVPISFTTAALGGEIEVPTL------DG-------RVKLKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQ  325 (371)
T ss_pred             EecCCEEEEEEeCHHHHhCCCeEEEecC------CC-------cEEEEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEE
Confidence            4578999999999999999999888654      45       58999999999999999999999864 3467999999


Q ss_pred             EEEeCCcceeecCCceEEE
Q 022539          191 VEEKPHAVFQRDGNDLVVN  209 (295)
Q Consensus       191 i~v~~h~~f~r~g~DL~~~  209 (295)
                      |+|..++.|++++.+|+.+
T Consensus       326 ~~v~~P~~l~~~~~~ll~~  344 (371)
T PRK10767        326 VVVETPVNLTKRQKELLEE  344 (371)
T ss_pred             EEEECCCCCCHHHHHHHHH
Confidence            9999999898888776543

>PRK14284 chaperone protein DnaJ; Provisional

Probab=98.79  E-value=8.6e-09  Score=98.04  Aligned_cols=84  Identities=13%  Similarity=0.191  Sum_probs=70.1

Q ss_pred             CCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCC-CcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEE
Q 022539          111 KPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHF-GKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLI  188 (295)
Q Consensus       111 ~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~-G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDli  188 (295)
                      .+++.|+++++.|||.||+.|++++|...      + |      ..++|.||+|+++|++++++|+|.+..+ ..+||||
T Consensus       274 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl------d~g------~~i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~  341 (391)
T PRK14284        274 ERRGDDLILELPIGFVDAALGMKKEIPTL------LKE------GTCRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLL  341 (391)
T ss_pred             eeecCCEEEEEEecHHHHhCCCeEEEeec------CCC------cEEEEEECCccCCCeEEEECCCCCCCCCCCCCCcEE
Confidence            35688999999999999999999888754      2 2      3689999999999999999999998653 4689999


Q ss_pred             EEEEEeCCcceeecCCce
Q 022539          189 FVVEEKPHAVFQRDGNDL  206 (295)
Q Consensus       189 v~i~v~~h~~f~r~g~DL  206 (295)
                      |+|++..++.++.....|
T Consensus       342 V~~~v~~P~~l~~~q~~l  359 (391)
T PRK14284        342 VRISVETPQNLSEEQKEL  359 (391)
T ss_pred             EEEEEECCCCCCHHHHHH
Confidence            999999887776655443

>PRK14298 chaperone protein DnaJ; Provisional

Probab=98.78  E-value=7.8e-09  Score=97.81  Aligned_cols=84  Identities=17%  Similarity=0.237  Sum_probs=72.3

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIFV  190 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv~  190 (295)
                      +++.|+++.+.|||.||+.|+++.|...      +|       .++|.||+|+++|++++++|+|.+..+ ...|||||+
T Consensus       262 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~i~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V~  328 (377)
T PRK14298        262 RVGDDIISEIPISFTQAALGADIMVPTL------YG-------KVKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVK  328 (377)
T ss_pred             EEcCcEEEEEEeCHHHHhCCCeEEEecC------CC-------CEEEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEEE
Confidence            4578999999999999999999888764      55       378999999999999999999998643 457999999


Q ss_pred             EEEeCCcceeecCCceEE
Q 022539          191 VEEKPHAVFQRDGNDLVV  208 (295)
Q Consensus       191 i~v~~h~~f~r~g~DL~~  208 (295)
                      |++..++.+++++.+|+.
T Consensus       329 ~~V~~P~~ls~~~~~ll~  346 (377)
T PRK14298        329 VIVKTPTKLTQEQKELLR  346 (377)
T ss_pred             EEEECCCCCCHHHHHHHH
Confidence            999999988888776643

>PRK14300 chaperone protein DnaJ; Provisional

Probab=98.78  E-value=2.2e-08  Score=94.60  Aligned_cols=78  Identities=12%  Similarity=0.191  Sum_probs=67.4

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC-CCCCccEEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFV  190 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~  190 (295)
                      +++.|+++++.|||.+|+.|+++.|...      +|      +.++|.||+|+++|++++++|+|.+.+ +..+|||+|+
T Consensus       262 R~G~Dl~~~~~Isl~~Al~G~~~~i~~l------dg------~~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~  329 (372)
T PRK14300        262 VDGANLHCKLPISFVNAALGGEIEVPVI------EG------GKVNLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLTH  329 (372)
T ss_pred             EecCCEEEEEecCHHHHhCCCEEEEecC------CC------CEEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEE
Confidence            4678999999999999999999888874      44      369999999999999999999999865 3568999999


Q ss_pred             EEEeCCcceee
Q 022539          191 VEEKPHAVFQR  201 (295)
Q Consensus       191 i~v~~h~~f~r  201 (295)
                      +++..+..+.-
T Consensus       330 ~~v~~P~~ls~  340 (372)
T PRK14300        330 IHVEVPKNLSK  340 (372)
T ss_pred             EEEECCCCCCH
Confidence            99998876543

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=98.76  E-value=1.3e-08  Score=95.59  Aligned_cols=81  Identities=15%  Similarity=0.200  Sum_probs=69.1

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIFV  190 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv~  190 (295)
                      +++.|+...+.|||.||+.|+++.|...      +|       .++|.||+|+++|++++++|+|.+..+ ..+|||||+
T Consensus       264 r~g~DL~~~~~isl~eAl~G~~~~i~~l------dG-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i~  330 (354)
T TIGR02349       264 RDGNDLYIEVPISFTQAILGGEIEVPTL------DG-------DVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVT  330 (354)
T ss_pred             EecCCEEEEEEeCHHHHhCCCeEEEecC------Cc-------eEEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEEE
Confidence            4578999999999999999998888764      44       589999999999999999999998654 368999999


Q ss_pred             EEEeCCcceeecCCc
Q 022539          191 VEEKPHAVFQRDGND  205 (295)
Q Consensus       191 i~v~~h~~f~r~g~D  205 (295)
                      |++..++.++++..+
T Consensus       331 ~~v~~P~~l~~~~~~  345 (354)
T TIGR02349       331 VKVETPKNLSKEQKE  345 (354)
T ss_pred             EEEECCCCCCHHHHH
Confidence            999988877765543

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14279 chaperone protein DnaJ; Provisional

Probab=98.75  E-value=3.1e-08  Score=94.17  Aligned_cols=75  Identities=13%  Similarity=0.171  Sum_probs=65.2

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVV  191 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i  191 (295)
                      +++.|+.+++.|||.||+.|.++.|...      +|       .++|.||+|+++|++++++|+|.+..+..+|||||+|
T Consensus       290 R~G~DL~~~~~Isl~eAl~G~~~~v~~l------dg-------~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~GDL~I~~  356 (392)
T PRK14279        290 RDGDDLTVTVPVSFTELALGSTLSVPTL------DG-------PVGVKVPAGTADGRILRVRGRGVPKRSGGAGDLLVTV  356 (392)
T ss_pred             eecCcEEEEEEccHHHHcCCceEEEEcC------Cc-------eEEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEE
Confidence            5688999999999999999998887754      44       4899999999999999999999987666789999999


Q ss_pred             EEeCCcce
Q 022539          192 EEKPHAVF  199 (295)
Q Consensus       192 ~v~~h~~f  199 (295)
                      ++.-+...
T Consensus       357 ~v~~P~~L  364 (392)
T PRK14279        357 KVAVPPNL  364 (392)
T ss_pred             EEECCCCC
Confidence            99976543

>PRK14287 chaperone protein DnaJ; Provisional

Probab=98.74  E-value=2.9e-08  Score=93.76  Aligned_cols=81  Identities=17%  Similarity=0.188  Sum_probs=69.1

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC-CCCCccEEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFV  190 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~  190 (295)
                      +.+.|++..+.|||.||+.|++++|...      +|       .++|.||+|+++|++++++|+|.+.. +...|||+|+
T Consensus       259 R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V~  325 (371)
T PRK14287        259 RDGDDIYCEMPLTFPQVALGDEIEVPTL------NG-------KVKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHVQ  325 (371)
T ss_pred             EecCCeEEEEeccHHHHhCCCEEEEEcC------CC-------CEEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEEE
Confidence            5688999999999999999999888764      45       37999999999999999999999864 3457999999


Q ss_pred             EEEeCCcceeecCCc
Q 022539          191 VEEKPHAVFQRDGND  205 (295)
Q Consensus       191 i~v~~h~~f~r~g~D  205 (295)
                      |++..++.++++...
T Consensus       326 ~~v~~P~~l~~~q~~  340 (371)
T PRK14287        326 VRVVTPKNLTEKEKE  340 (371)
T ss_pred             EEEEcCCCCCHHHHH
Confidence            999999877765543

>PRK14301 chaperone protein DnaJ; Provisional

Probab=98.73  E-value=4e-08  Score=92.93  Aligned_cols=81  Identities=15%  Similarity=0.140  Sum_probs=68.5

Q ss_pred             CCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEE
Q 022539          111 KPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIF  189 (295)
Q Consensus       111 ~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv  189 (295)
                      .+++.|+++++.|||.||+.|+++.|...      +|       .++|.||+|+++|++++++|+|.+..+ ..+|||||
T Consensus       260 ~r~G~DL~~~~~Isl~eAl~G~~~~v~tl------dG-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I  326 (373)
T PRK14301        260 QRQGQDLVVTQEISFVQAALGDRIEVPTL------DD-------PVTLDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLV  326 (373)
T ss_pred             eeecCcEEEEEEecHHHHhCCCeEEEecC------Cc-------cEEEEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence            35688999999999999999999888664      45       389999999999999999999998654 35799999


Q ss_pred             EEEEeCCcceeecCC
Q 022539          190 VVEEKPHAVFQRDGN  204 (295)
Q Consensus       190 ~i~v~~h~~f~r~g~  204 (295)
                      +|.+..++.+.....
T Consensus       327 ~~~V~~P~~l~~~q~  341 (373)
T PRK14301        327 EVSVVTPTKLTKRQE  341 (373)
T ss_pred             EEEEECCCCCCHHHH
Confidence            999998876655443

>PRK14295 chaperone protein DnaJ; Provisional

Probab=98.71  E-value=4.9e-08  Score=92.74  Aligned_cols=75  Identities=19%  Similarity=0.211  Sum_probs=65.0

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVV  191 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i  191 (295)
                      +.+.|+++++.|||.+|+.|++++|...      +|      +.++|.||+|+++|++++++|+|.+..++.+|||||+|
T Consensus       283 R~G~DL~~~~~Isl~eAl~G~~~~I~tl------dG------~~~~v~ip~g~~~g~~iri~G~G~p~~~~~~GDL~i~~  350 (389)
T PRK14295        283 RSGDNLTVTVPVTFPEAALGAEVRVPTL------GG------PPVTVKLPPGTPNGRVLRVRGKGAVRKDGTRGDLLVTV  350 (389)
T ss_pred             EecCCEEEEEeecHHHHhCCCeEEEECC------CC------CEEEEEECCccCCCcEEEECCCCcCCCCCCCCCEEEEE
Confidence            4578999999999999999999888653      45      36999999999999999999999987666789999999


Q ss_pred             EEeCCcc
Q 022539          192 EEKPHAV  198 (295)
Q Consensus       192 ~v~~h~~  198 (295)
                      .+.-+..
T Consensus       351 ~v~~P~~  357 (389)
T PRK14295        351 EVAVPKD  357 (389)
T ss_pred             EEECCCC
Confidence            9996543

>PRK14291 chaperone protein DnaJ; Provisional

Probab=98.70  E-value=5.2e-08  Score=92.42  Aligned_cols=74  Identities=24%  Similarity=0.255  Sum_probs=64.4

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIFV  190 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv~  190 (295)
                      +.+.|+++.+.|||+||+.|+++.|...      +|      +.++|.||+|+++|++++++|+|.+..+ ..+|||+|+
T Consensus       272 r~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG------~~l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V~  339 (382)
T PRK14291        272 RRGDNLYLDVNITVAEAVLGTELEVPLL------DG------KKEKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVR  339 (382)
T ss_pred             eecCCeEEEEEeeHHHHhCCCEEEEecC------CC------CEEEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEEE
Confidence            5688999999999999999999988874      55      3689999999999999999999998653 457999999


Q ss_pred             EEEeCCc
Q 022539          191 VEEKPHA  197 (295)
Q Consensus       191 i~v~~h~  197 (295)
                      |++.-+.
T Consensus       340 ~~V~~P~  346 (382)
T PRK14291        340 VHIDVPK  346 (382)
T ss_pred             EEEEeCC
Confidence            9999653

>PRK14288 chaperone protein DnaJ; Provisional

Probab=98.70  E-value=5.9e-08  Score=91.63  Aligned_cols=81  Identities=14%  Similarity=0.142  Sum_probs=68.8

Q ss_pred             CCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCC-CCccEEE
Q 022539          111 KPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGL-PPADLIF  189 (295)
Q Consensus       111 ~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~-~~GDliv  189 (295)
                      .+.|.||.+.+.|||.||+.|+++.|...      +|+      .++|.||+|+++|+.++++|+|.+.++. ..|||+|
T Consensus       254 ~R~G~DL~~~~~Isl~eAllG~~i~v~tL------dG~------~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v  321 (369)
T PRK14288        254 KREGCDLFIEAPVFFTTIALGHTIKVPSL------KGD------ELELKIPRNARDRQTFAFRNEGVKHPESSYRGSLIV  321 (369)
T ss_pred             EEeCCEEEEEEecCHHHHhcCCEEEeecC------CCC------EEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence            35688999999999999999998888765      562      5899999999999999999999986554 4699999


Q ss_pred             EEEEeCCcceeecC
Q 022539          190 VVEEKPHAVFQRDG  203 (295)
Q Consensus       190 ~i~v~~h~~f~r~g  203 (295)
                      ++.+..++.+..+.
T Consensus       322 ~~~v~~P~~ls~~q  335 (369)
T PRK14288        322 ELQVIYPKSLNKEQ  335 (369)
T ss_pred             EEEEECCCCCCHHH
Confidence            99999887765443

>PRK14293 chaperone protein DnaJ; Provisional

Probab=98.68  E-value=2.5e-08  Score=94.31  Aligned_cols=83  Identities=17%  Similarity=0.211  Sum_probs=71.7

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCC--CCccEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGL--PPADLIF  189 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~--~~GDliv  189 (295)
                      +++.|+..+++|||.||+.|+++.|...      +|       .++|.||+|+++|++++++|+|.+..+.  ..|||||
T Consensus       264 r~g~DL~~~~~Isl~eAl~G~~~~i~~l------dG-------~~~i~ip~~~~~g~~~ri~g~G~p~~~~~~~~GDL~v  330 (374)
T PRK14293        264 RDGINILSEIKISYLQAILGDTLEVDTV------DG-------PVELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHLI  330 (374)
T ss_pred             hhhhceEEEeccCHHHHhCCCEEEecCC------CC-------CEEEEeCCCCCCCCEEEECCCCCCCCCCCCCcCCEEE
Confidence            4578999999999999999999888875      55       3689999999999999999999986543  4799999


Q ss_pred             EEEEeCCcceeecCCceE
Q 022539          190 VVEEKPHAVFQRDGNDLV  207 (295)
Q Consensus       190 ~i~v~~h~~f~r~g~DL~  207 (295)
                      ++++..++.+++++.+++
T Consensus       331 ~~~v~~P~~l~~~~~~l~  348 (374)
T PRK14293        331 TVKVKIPTRISDEERELL  348 (374)
T ss_pred             EEEEECCCCCCHHHHHHH
Confidence            999999988888877664

>PRK14276 chaperone protein DnaJ; Provisional

Probab=98.63  E-value=1.1e-07  Score=90.21  Aligned_cols=75  Identities=16%  Similarity=0.144  Sum_probs=64.7

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIFV  190 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv~  190 (295)
                      +.+.|+++.+.|||.||+.|++++|...      +|       .++|.||+|+++|++++++|+|.+..+ ..+|||||+
T Consensus       267 R~G~DL~~~~~Isl~eAl~G~~~~v~tl------dg-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~  333 (380)
T PRK14276        267 RDGSTIYYTLPISFVQAALGDTVEVPTV------HG-------DVELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHVT  333 (380)
T ss_pred             eecceEEEEEecCHHHHhCCCeEEEEcC------CC-------cEEEEECCCCCCCCEEEECCCCcCCCCCCCCCCEEEE
Confidence            5688999999999999999999888775      45       379999999999999999999998653 457999999


Q ss_pred             EEEeCCcce
Q 022539          191 VEEKPHAVF  199 (295)
Q Consensus       191 i~v~~h~~f  199 (295)
                      |++.-+...
T Consensus       334 ~~v~~P~~l  342 (380)
T PRK14276        334 VNIVTPTKL  342 (380)
T ss_pred             EEEECCCCC
Confidence            999976543

>PRK14292 chaperone protein DnaJ; Provisional

Probab=98.60  E-value=1.3e-07  Score=89.40  Aligned_cols=80  Identities=16%  Similarity=0.176  Sum_probs=67.6

Q ss_pred             CCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC-CCCCccEEE
Q 022539          111 KPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIF  189 (295)
Q Consensus       111 ~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv  189 (295)
                      .+.+.|+...+.|+|.||+.|+++.|...      +|+       .+|.||+|+++|++++++|+|.+.. +..+|||||
T Consensus       258 ~r~g~dL~~~~~isl~eAl~G~~~~i~tl------dG~-------~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V  324 (371)
T PRK14292        258 RREQEHLIYEARIGFAKAALGGQITVPTL------DGP-------QVIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIV  324 (371)
T ss_pred             ccchhceeEEeccCHHHHhCCCeEEEECC------CCC-------EEEecCCCcCCCcEEEECCCCCCCCCCCCCCCEEE
Confidence            35678999999999999999999888854      452       3699999999999999999999864 446899999


Q ss_pred             EEEEeCCcceeecC
Q 022539          190 VVEEKPHAVFQRDG  203 (295)
Q Consensus       190 ~i~v~~h~~f~r~g  203 (295)
                      ++++..++.+..+.
T Consensus       325 ~~~v~~P~~l~~~q  338 (371)
T PRK14292        325 EYEIAVPKQLSPEA  338 (371)
T ss_pred             EEEEECCCCCCHHH
Confidence            99999987666544

>PRK14280 chaperone protein DnaJ; Provisional

Probab=98.58  E-value=2e-07  Score=88.33  Aligned_cols=75  Identities=20%  Similarity=0.242  Sum_probs=64.1

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC-CCCCccEEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFV  190 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~  190 (295)
                      +.+.|+++++.|||.||+.|+++.|...      +|       .++|.||+|+++|++++++|+|.+.. +...|||+|+
T Consensus       264 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dg-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~  330 (376)
T PRK14280        264 RDGDDIYCEMPLTFAQAALGDEIEVPTL------HG-------KVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYVV  330 (376)
T ss_pred             EecCCEEEEEecCHHHHhCCCEEEEecC------Cc-------eEEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEEE
Confidence            4688999999999999999998888754      45       37999999999999999999999864 3457999999


Q ss_pred             EEEeCCcce
Q 022539          191 VEEKPHAVF  199 (295)
Q Consensus       191 i~v~~h~~f  199 (295)
                      |++..+...
T Consensus       331 ~~v~~P~~L  339 (376)
T PRK14280        331 VRVVTPTKL  339 (376)
T ss_pred             EEEECCCCC
Confidence            999976543

>PRK14286 chaperone protein DnaJ; Provisional

Probab=98.57  E-value=2e-07  Score=88.17  Aligned_cols=78  Identities=17%  Similarity=0.135  Sum_probs=66.0

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIFV  190 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv~  190 (295)
                      +.+.|+.+.+.|+|.||+.|+++.|...      +|      +.++|.||+|+++|++++++|+|.+..+ ...|||+|+
T Consensus       267 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG------~~i~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V~  334 (372)
T PRK14286        267 RQGNDLILVRKISLAQAILGAEIEVPTI------DG------KKAKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVI  334 (372)
T ss_pred             EecCCEEEEEEECHHHHhCCCEEEEeCC------CC------CEEEEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEEE
Confidence            4578999999999999999998887764      55      3689999999999999999999998643 357999999


Q ss_pred             EEEeCCcceee
Q 022539          191 VEEKPHAVFQR  201 (295)
Q Consensus       191 i~v~~h~~f~r  201 (295)
                      |.+.-+..+..
T Consensus       335 ~~V~~P~~Ls~  345 (372)
T PRK14286        335 VKIEIPKKITR  345 (372)
T ss_pred             EEEECCCCCCH
Confidence            99997765443

>PRK14281 chaperone protein DnaJ; Provisional

Probab=98.57  E-value=2e-07  Score=88.87  Aligned_cols=74  Identities=18%  Similarity=0.148  Sum_probs=63.6

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIFV  190 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv~  190 (295)
                      +++.|+++++.|||.||+.|+++.|...      +|       .++|.||+|+++|++++++|+|.+... ...|||||+
T Consensus       283 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dg-------~i~v~ip~g~~~G~~~ri~g~G~P~~~~~~~GDL~V~  349 (397)
T PRK14281        283 RNGDDVIYNLAVSYPDLVLGTKVEVPTL------DG-------AVKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYVR  349 (397)
T ss_pred             EecCCEEEEEEecHHHHhcCCeEEeecC------Cc-------cEEEEeCCccCCCcEEEEcCCCCCCCCCCCCCCEEEE
Confidence            5678999999999999999998888864      45       378999999999999999999998643 457999999


Q ss_pred             EEEeCCcc
Q 022539          191 VEEKPHAV  198 (295)
Q Consensus       191 i~v~~h~~  198 (295)
                      |+|.-+..
T Consensus       350 ~~V~~P~~  357 (397)
T PRK14281        350 VNVFVPKE  357 (397)
T ss_pred             EEEEcCCC
Confidence            99996553

>PRK14283 chaperone protein DnaJ; Provisional

Probab=98.57  E-value=3.4e-07  Score=86.75  Aligned_cols=79  Identities=16%  Similarity=0.327  Sum_probs=65.5

Q ss_pred             ecCCceEEEEEecHHHHhcCCEEEEecc--------C-------------------------------------------
Q 022539          201 RDGNDLVVNHKISLLEALTGLSLNLTAL--------D-------------------------------------------  229 (295)
Q Consensus       201 r~g~DL~~~~~I~l~~Al~G~~~~i~~l--------~-------------------------------------------  229 (295)
                      +.|.|+.+++.|||.|++.|++++|...        .                                           
T Consensus       117 ~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~  196 (378)
T PRK14283        117 QRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQ  196 (378)
T ss_pred             cCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCC
Confidence            3588999999999999999998766331        1                                           


Q ss_pred             ---------------------CcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCH
Q 022539          230 ---------------------GRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTA  280 (295)
Q Consensus       230 ---------------------g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~  280 (295)
                                           ..+++|.||+++++|++++++|+|+|... .+.+|||||+|+|..++.+..
T Consensus       197 G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~g~G~~~~~-~~~~GDLiv~i~v~~~~~f~r  267 (378)
T PRK14283        197 GEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGEGEMGDR-GGEPGDLYVVIKVKPHKIFRR  267 (378)
T ss_pred             ccceecCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEEeccccCCCC-CCCCccEEEEEEEEcCCCEEE
Confidence                                 13678899999999999999999999765 357899999999998886553

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=98.54  E-value=2.9e-07  Score=85.69  Aligned_cols=77  Identities=16%  Similarity=0.154  Sum_probs=67.1

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCC-CCCCCccEEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQE-PGLPPADLIFV  190 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~-~~~~~GDliv~  190 (295)
                      +.+.||.++++|+|.+|..|.+.+|+..      .|       .++|.||||++.|+.++++|+|.+. .+...|||||+
T Consensus       261 R~g~dL~~~~~Is~~~AalG~~i~vptl------~g-------~~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v~  327 (371)
T COG0484         261 RDGDDLYCEVPISFTEAALGGEIEVPTL------DG-------RVKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYVR  327 (371)
T ss_pred             ECCCceEeccccCHHHHhcCCEEEEEec------CC-------CEEEecCCCCccCcEEEEcCCCccccCCCCcCCEEEE
Confidence            5678999999999999999999988876      56       3999999999999999999999986 45567999999


Q ss_pred             EEEeCCcceee
Q 022539          191 VEEKPHAVFQR  201 (295)
Q Consensus       191 i~v~~h~~f~r  201 (295)
                      |+|.-+..+..
T Consensus       328 v~v~~P~~ls~  338 (371)
T COG0484         328 VKVETPKNLSD  338 (371)
T ss_pred             EEEEcCCCCCH
Confidence            99998776543

>PRK14297 chaperone protein DnaJ; Provisional

Probab=98.54  E-value=2.6e-07  Score=87.66  Aligned_cols=74  Identities=15%  Similarity=0.079  Sum_probs=63.5

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC-CCCCccEEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFV  190 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~  190 (295)
                      +.+.|+++.+.|||.||+.|+++.|...      +|       .++|.||+|+++|++++++|+|.+.. +...|||||+
T Consensus       269 R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~  335 (380)
T PRK14297        269 RKGFDIYIDKHISFAKAALGTEIKVPTV------DG-------EVKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYVT  335 (380)
T ss_pred             EeCCCEEEEEEeCHHHHhCCCcEEEEcC------CC-------cEEEEECCCcCCCCEEEEcCCCcCCCCCCCCCcEEEE
Confidence            4588999999999999999999888774      45       37999999999999999999999864 3457999999


Q ss_pred             EEEeCCcc
Q 022539          191 VEEKPHAV  198 (295)
Q Consensus       191 i~v~~h~~  198 (295)
                      |+|.-+..
T Consensus       336 ~~v~~P~~  343 (380)
T PRK14297        336 VIVDIPKK  343 (380)
T ss_pred             EEEEcCCC
Confidence            99996543

>PRK14278 chaperone protein DnaJ; Provisional

Probab=98.51  E-value=4.1e-07  Score=86.24  Aligned_cols=75  Identities=17%  Similarity=0.150  Sum_probs=63.5

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC-CCCCccEEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFV  190 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~  190 (295)
                      +++.|+++.+.|+|.+|+.|+++.|...      ++      ..++|.||+|+++|++++++|+|.+.. +...|||||+
T Consensus       260 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------d~------~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V~  327 (378)
T PRK14278        260 RDGDDLHCTVSVPMVDAALGTTVTVEAI------LD------GPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAH  327 (378)
T ss_pred             EcCCCEEEEEecCHHHHhcCCeEEEecC------CC------CeEEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEEE
Confidence            5688999999999999999998887753      22      268999999999999999999999864 3457999999


Q ss_pred             EEEeCCcc
Q 022539          191 VEEKPHAV  198 (295)
Q Consensus       191 i~v~~h~~  198 (295)
                      |++.-+..
T Consensus       328 ~~V~~P~~  335 (378)
T PRK14278        328 VEVVVPTR  335 (378)
T ss_pred             EEEEcCCC
Confidence            99996543

>PRK14277 chaperone protein DnaJ; Provisional

Probab=98.46  E-value=6.2e-07  Score=85.23  Aligned_cols=74  Identities=19%  Similarity=0.131  Sum_probs=62.9

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIFV  190 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv~  190 (295)
                      +.+.|+++++.|||.||+.|+++.|...      +|       .++|.||+|+++|++++++|+|.+..+ ...|||||+
T Consensus       276 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~  342 (386)
T PRK14277        276 REGYNVYLEMPITFTDAALGGEIEIPTL------DG-------KVKFTIPEGTQTGTKFRLRGKGIPHLRGRGRGDQIVK  342 (386)
T ss_pred             EecCCEEEEEEcCHHHHhCCCEEEEEcC------CC-------CEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEE
Confidence            4578999999999999999998888764      56       379999999999999999999998543 357999999


Q ss_pred             EEEeCCcc
Q 022539          191 VEEKPHAV  198 (295)
Q Consensus       191 i~v~~h~~  198 (295)
                      +.|.-+..
T Consensus       343 ~~V~~P~~  350 (386)
T PRK14277        343 VYIEVPKK  350 (386)
T ss_pred             EEEEeCCC
Confidence            99985543

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=98.43  E-value=6.5e-07  Score=85.76  Aligned_cols=74  Identities=18%  Similarity=0.099  Sum_probs=63.5

Q ss_pred             CCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCC--CcCCCeEecCCCCCCCCC--CCCcc
Q 022539          111 KPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPG--WKKGTKITFPEKGNQEPG--LPPAD  186 (295)
Q Consensus       111 ~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G--~~~G~~i~~~g~G~~~~~--~~~GD  186 (295)
                      .+.|.||.+++.|||.||+.|.++.|...      +|+      .++|.||||  +++|++++++|+|.+..+  ...||
T Consensus       270 ~R~G~DL~~~~~Isl~eAllG~~i~I~tL------dG~------~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGD  337 (421)
T PTZ00037        270 KREGGDLFITKKISLYEALTGFVFYITHL------DGR------KLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGN  337 (421)
T ss_pred             EEeCCeEEEEEeCCHHHHhcCCEEEeeCC------CCC------eEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCC
Confidence            35688999999999999999998887765      663      589999999  999999999999998543  35799


Q ss_pred             EEEEEEEeCC
Q 022539          187 LIFVVEEKPH  196 (295)
Q Consensus       187 liv~i~v~~h  196 (295)
                      |||++.|.-+
T Consensus       338 L~V~~~V~~P  347 (421)
T PTZ00037        338 LYVTFEVIFP  347 (421)
T ss_pred             EEEEEEEEcC
Confidence            9999999865

>PRK14296 chaperone protein DnaJ; Provisional

Probab=98.42  E-value=8.7e-07  Score=83.78  Aligned_cols=73  Identities=16%  Similarity=0.071  Sum_probs=62.5

Q ss_pred             CCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC--CCCCccEEEEE
Q 022539          114 PTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP--GLPPADLIFVV  191 (295)
Q Consensus       114 ~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~--~~~~GDliv~i  191 (295)
                      +.||.++++|||.||+.|+++.|...      +|       .++|.||+|+++|++++++|+|.+..  ....|||||++
T Consensus       273 G~DL~~~~~Isl~eAllG~~~~i~tl------dG-------~~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~  339 (372)
T PRK14296        273 NNDILMTYNISYLDAILGNEIIIKTL------DG-------DIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKV  339 (372)
T ss_pred             CCcEEEEEecCHHHHhCCCEEEeeCC------CC-------CEEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEE
Confidence            68999999999999999999888765      56       37899999999999999999998732  34579999999


Q ss_pred             EEeCCcce
Q 022539          192 EEKPHAVF  199 (295)
Q Consensus       192 ~v~~h~~f  199 (295)
                      .|.-+...
T Consensus       340 ~V~~P~~L  347 (372)
T PRK14296        340 NIVVPKNL  347 (372)
T ss_pred             EEECCCCC
Confidence            99966543

>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.40  E-value=1.9e-07  Score=80.42  Aligned_cols=54  Identities=33%  Similarity=0.651  Sum_probs=48.6

Q ss_pred             CccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhh-hcCC
Q 022539            4 DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYD-VLSD   59 (295)
Q Consensus         4 d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~-~L~d   59 (295)
                      .||.+|||..+|+.+|++.||..||+++|||...+  +...+.|..|.+||. ||+.
T Consensus        48 e~fril~v~e~~~adevr~af~~lakq~hpdsgs~--~adaa~f~qideafrkvlq~  102 (342)
T KOG0568|consen   48 ECFRILGVEEGADADEVREAFHDLAKQVHPDSGSE--EADAARFIQIDEAFRKVLQE  102 (342)
T ss_pred             HHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCc--cccHHHHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999865  345789999999998 7764

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]

Probab=98.33  E-value=4.2e-07  Score=92.44  Aligned_cols=52  Identities=35%  Similarity=0.615  Sum_probs=44.3

Q ss_pred             CccceecCCCC----CCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCC
Q 022539            4 DYYNILKVSRG----ATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSD   59 (295)
Q Consensus         4 d~Y~iLgv~~~----a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d   59 (295)
                      +-|+||.|+-+    -..+.||++|+|||.+|||||||.    -.++|..+|+|||.|+.
T Consensus      1282 ~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE----GRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1282 LAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE----GREMFERVNKAYELLSS 1337 (2235)
T ss_pred             HHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch----HHHHHHHHHHHHHHHHH
Confidence            56899988762    234789999999999999999985    46899999999999983

>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.13  E-value=4.4e-06  Score=63.54  Aligned_cols=50  Identities=28%  Similarity=0.400  Sum_probs=43.6

Q ss_pred             ceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCcc
Q 022539            7 NILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPR   61 (295)
Q Consensus         7 ~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~   61 (295)
                      -||||+++++.+.||+|+|++....|||+..++     -.-.+||||+++|....
T Consensus        60 lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP-----YlAsKINEAKdlLe~~~  109 (112)
T KOG0723|consen   60 LILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP-----YLASKINEAKDLLEGTS  109 (112)
T ss_pred             HHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH-----HHHHHHHHHHHHHhccc
Confidence            389999999999999999999999999999752     45568999999997543

>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=97.12  E-value=0.00027  Score=57.64  Aligned_cols=66  Identities=30%  Similarity=0.518  Sum_probs=52.8

Q ss_pred             CCccceecCCC--CCCHHHHHHHHHHHHHHhCCCCCCC----CcHHHHHHHHHHHHHhhhcCCccccccccC
Q 022539            3 VDYYNILKVSR--GATEDDLKKSYKRLAMKWHPDKNPA----TNQQAEAKFKLISEAYDVLSDPRKRQIYDL   68 (295)
Q Consensus         3 ~d~Y~iLgv~~--~a~~~eIk~ayr~la~~~hPd~~~~----~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (295)
                      ++||.++|...  ...++..+.-|.-..+++|||+...    ....|.+...++|+||.+|.||-+|+.|=.
T Consensus         8 ~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yil   79 (168)
T KOG3192|consen    8 SRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLL   79 (168)
T ss_pred             HHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence            57899986654  5566777778999999999999421    123578889999999999999999999864

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=96.89  E-value=0.0025  Score=58.93  Aligned_cols=75  Identities=23%  Similarity=0.228  Sum_probs=63.7

Q ss_pred             CCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCC--CcCCCeEecCCCCCCCCCCCCccEE
Q 022539          111 KPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPG--WKKGTKITFPEKGNQEPGLPPADLI  188 (295)
Q Consensus       111 ~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G--~~~G~~i~~~g~G~~~~~~~~GDli  188 (295)
                      .+++.++...++++|.|+..|..+.+...      +|      +.+++.++||  +.+|++.+++|+|.+......||||
T Consensus       248 ~Rrg~dL~~~~~i~l~eal~G~~~~~~~l------dG------r~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~~g~ly  315 (337)
T KOG0712|consen  248 DRRGSDLYRKLTISLVEALCGFQRVWETL------DG------RLLKLSSKPGEVISPGDTKRVEGEGMPIFRNPKGDLY  315 (337)
T ss_pred             eecccccceeeecchhhccccceEEEEcc------CC------ceEEEecCCCceeChhHEEeecCCCcccccCCCCcEE
Confidence            35578999999999999999977776622      56      4799999999  9999999999999998666699999


Q ss_pred             EEEEEeCCc
Q 022539          189 FVVEEKPHA  197 (295)
Q Consensus       189 v~i~v~~h~  197 (295)
                      |.+.|+-.+
T Consensus       316 i~~~v~fp~  324 (337)
T KOG0712|consen  316 IKFEVKFPK  324 (337)
T ss_pred             EEEEEEcCC
Confidence            999999654

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=96.49  E-value=0.0014  Score=55.42  Aligned_cols=55  Identities=35%  Similarity=0.558  Sum_probs=46.7

Q ss_pred             CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--c----HHHHHHHHHHHHHhhhc
Q 022539            3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPAT--N----QQAEAKFKLISEAYDVL   57 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~--~----~~~~~~f~~i~~Ay~~L   57 (295)
                      .+.|.+|+++..++..+|+++|+++..++|||+-...  .    ..+.+++++|++||+.+
T Consensus       113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~  173 (174)
T COG1076         113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI  173 (174)
T ss_pred             hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999999999984321  1    35888999999999853

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=95.75  E-value=0.0042  Score=52.55  Aligned_cols=65  Identities=29%  Similarity=0.451  Sum_probs=51.7

Q ss_pred             CccceecCCCCCC--HHHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHHHHHHHhhhcCCccccccccC
Q 022539            4 DYYNILKVSRGAT--EDDLKKSYKRLAMKWHPDKNPATNQ----QAEAKFKLISEAYDVLSDPRKRQIYDL   68 (295)
Q Consensus         4 d~Y~iLgv~~~a~--~~eIk~ayr~la~~~hPd~~~~~~~----~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (295)
                      ||....+.++.+.  .+..+..|+.+++.+|||+......    .+.+.+..++.||.+|.+|-+|+.|=.
T Consensus         2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~l   72 (174)
T COG1076           2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLL   72 (174)
T ss_pred             CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence            5666667777554  3578999999999999999854322    255689999999999999999999875

>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]

Probab=95.12  E-value=0.024  Score=55.08  Aligned_cols=44  Identities=32%  Similarity=0.442  Sum_probs=32.3

Q ss_pred             CCCCHHHHHHHHHHHHHHhCCCCCCCC--cH----HHHHHHHHHHHHhhh
Q 022539           13 RGATEDDLKKSYKRLAMKWHPDKNPAT--NQ----QAEAKFKLISEAYDV   56 (295)
Q Consensus        13 ~~a~~~eIk~ayr~la~~~hPd~~~~~--~~----~~~~~f~~i~~Ay~~   56 (295)
                      .=.+.++|||||||..+..||||-+..  ..    .+++.|..+++|+..
T Consensus       398 DLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~  447 (453)
T KOG0431|consen  398 DLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNK  447 (453)
T ss_pred             hccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHh
Confidence            345889999999999999999997543  11    255666666666654

>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []

Probab=93.51  E-value=0.13  Score=41.19  Aligned_cols=51  Identities=22%  Similarity=0.231  Sum_probs=37.0

Q ss_pred             cceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCcc
Q 022539            6 YNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPR   61 (295)
Q Consensus         6 Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~   61 (295)
                      ..||+|++.++.++|.+.|.+|-...+|++..+     .-.-.+|..|.|.|..+.
T Consensus        61 ~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS-----fYLQSKV~rAKErl~~El  111 (127)
T PF03656_consen   61 RQILNVKEELSREEIQKRYKHLFKANDPSKGGS-----FYLQSKVFRAKERLEQEL  111 (127)
T ss_dssp             HHHHT--G--SHHHHHHHHHHHHHHT-CCCTS------HHHHHHHHHHHHHHHHHH
T ss_pred             HHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC-----HHHHHHHHHHHHHHHHHH
Confidence            368999999999999999999999999998753     455567888888876543

In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.

>PF13446 RPT: A repeated domain in UCH-protein

Probab=88.69  E-value=0.89  Score=31.34  Aligned_cols=25  Identities=16%  Similarity=0.336  Sum_probs=23.1

Q ss_pred             ccceecCCCCCCHHHHHHHHHHHHH
Q 022539            5 YYNILKVSRGATEDDLKKSYKRLAM   29 (295)
Q Consensus         5 ~Y~iLgv~~~a~~~eIk~ayr~la~   29 (295)
                      -|+.|||+++++.+.|-.+|+....
T Consensus         7 Ay~~Lgi~~~~~Dd~Ii~~f~~~~~   31 (62)
T PF13446_consen    7 AYEILGIDEDTDDDFIISAFQSKVN   31 (62)
T ss_pred             HHHHhCcCCCCCHHHHHHHHHHHHH
Confidence            4899999999999999999999876

>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised

Probab=86.58  E-value=0.98  Score=38.89  Aligned_cols=40  Identities=28%  Similarity=0.422  Sum_probs=31.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhh-cCCc
Q 022539           12 SRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDV-LSDP   60 (295)
Q Consensus        12 ~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~-L~d~   60 (295)
                      +++||.+||.+|+.++..+|--|         ++.-..|..||+. |++.
T Consensus         1 S~~ASfeEIq~Arn~ll~~y~gd---------~~~~~~IEaAYD~ILM~r   41 (194)
T PF11833_consen    1 SEDASFEEIQAARNRLLAQYAGD---------EKSREAIEAAYDAILMER   41 (194)
T ss_pred             CCCCCHHHHHHHHHHHHHHhcCC---------HHHHHHHHHHHHHHHHHH
Confidence            57999999999999999988222         3556679999995 4443

This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.

>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]

Probab=86.52  E-value=0.61  Score=43.42  Aligned_cols=55  Identities=35%  Similarity=0.523  Sum_probs=43.4

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCCCCC---CcHHHHHHHHHHHHHhhhcCCccccccccC
Q 022539           14 GATEDDLKKSYKRLAMKWHPDKNPA---TNQQAEAKFKLISEAYDVLSDPRKRQIYDL   68 (295)
Q Consensus        14 ~a~~~eIk~ayr~la~~~hPd~~~~---~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (295)
                      -++..+|+.+|+..++..||++-..   .....++.|++|.+||++|++..+|..+|.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~   60 (335)
T KOG0724|consen    3 LASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDS   60 (335)
T ss_pred             cccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhh
Confidence            3678899999999999999998741   112467889999999999998666555554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	295
3agz_A	190	Crystal Structure Of Human Hsp40 Hdj1 Peptide-Bindi		2e-39
2qld_A	183	Human Hsp40 Hdj1 Length = 183		2e-39
3agx_A	181	Crystal Structure Of Human Hsp40 Hdj1 Peptide-Bindi		3e-39
2q2g_A	180	Crystal Structure Of Dimerization Domain Of Hsp40 F		4e-38
1c3g_A	170	S. Cerevisiae Heat Shock Protein 40 Sis1 Length = 1		9e-27
2b26_A	173	The Crystal Structure Of The Protein Complex Of Yea		9e-27
2lgw_A	99	Solution Structure Of The J Domain Of Hsj1a Length		3e-20
1hdj_A	77	Human Hsp40 (Hdj-1), Nmr Length = 77		3e-20
1nlt_A	248	The Crystal Structure Of Hsp40 Ydj1 Length = 248		5e-20
2ej7_A	82	Solution Structure Of The Dnaj Domain Of The Human		3e-19
2dmx_A	92	Solution Structure Of The J Domain Of Dnaj Homolog		3e-18
1xbl_A	107	Nmr Structure Of The J-Domain (Residues 2-76) In Th		5e-17
1bq0_A	103	J-Domain (Residues 1-77) Of The Escherichia Coli N-		6e-17
1bqz_A	77	J-Domain (Residues 1-77) Of The Escherichia Coli N-		3e-16
2ctp_A	78	Solution Structure Of J-Domain From Human Dnaj Subf		6e-16
2ctw_A	109	Solution Structure Of J-Domain From Mouse Dnaj Subf		4e-15
2och_A	73	J-domain Of Dnj-12 From Caenorhabditis Elegans Leng		4e-14
2lo1_A	71	Nmr Structure Of The Protein Bc008182, A Dnaj-Like		6e-14
2ctr_A	88	Solution Structure Of J-Domain From Human Dnaj Subf		1e-12
2o37_A	92	J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S		1e-12
2cug_A	88	Solution Structure Of The J Domain Of The Pseudo Dn		2e-12
2dn9_A	79	Solution Structure Of J-Domain From The Dnaj Homolo		1e-11
3lz8_A	329	Structure Of A Putative Chaperone Dnaj From Klebsie		2e-11
3apo_A	780	Crystal Structure Of Full-Length Erdj5 Length = 780		9e-11
3apq_A	210	Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt		1e-10
1xao_A	121	Hsp40-Ydj1 Dimerization Domain Length = 121		6e-09
2y4u_A	450	Crystal Structure Of Human P58(Ipk) In Space Group		7e-08
2y4t_A	450	Crystal Structure Of The Human Co-Chaperone P58(Ipk		9e-08
2kqx_A	73	Nmr Structure Of The J-Domain (Residues 2-72) In Th		5e-07
2yua_A	99	Solution Structure Of The Dnaj Domain From Human Wi		9e-06
1wjz_A	94	Soluiotn Structure Of J-Domain Of Mouse Dnaj Like P		4e-05
2qsa_A	109	Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2		1e-04
2l6l_A	155	Solution Structure Of Human J-Protein Co-Chaperone,		1e-04

>pdb|3AGZ|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding Domain Complexed With A C-Terminal Peptide Of Hsp70 Length = 190

Iteration: 1
 Score =  159 bits (402), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 80/173 (46%), Positives = 123/173 (71%), Gaps = 5/173 (2%)
Query: 121 LLCTLEELYKGARKKMKIS--RVLPDHFGKPITVQE-ILKIDIKPGWKKGTKITFPEKGN 177
           L  +LEE+Y G  KKMKIS  R+ PD  GK I  ++ IL I++K GWK+GTKITFP++G+
Sbjct: 18  LRVSLEEIYSGCTKKMKISHKRLNPD--GKSIRNEDKILTIEVKKGWKEGTKITFPKEGD 75
Query: 178 QEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPV 237
           Q     PAD++FV+++KPH +F+RDG+D++   +ISL EAL G ++N+  LDGR + +  
Sbjct: 76  QTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVF 135
Query: 238 TDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRAL 290
            D+I+PG    +P EG+P+ K P K+G+LII+F+++FP R+    ++ L++ L
Sbjct: 136 KDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 188

>pdb|2QLD|A Chain A, Human Hsp40 Hdj1 Length = 183

Iteration: 1
 Score =  159 bits (401), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 80/173 (46%), Positives = 123/173 (71%), Gaps = 5/173 (2%)
Query: 121 LLCTLEELYKGARKKMKIS--RVLPDHFGKPITVQE-ILKIDIKPGWKKGTKITFPEKGN 177
           L  +LEE+Y G  KKMKIS  R+ PD  GK I  ++ IL I++K GWK+GTKITFP++G+
Sbjct: 11  LRVSLEEIYSGCTKKMKISHKRLNPD--GKSIRNEDKILTIEVKKGWKEGTKITFPKEGD 68
Query: 178 QEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPV 237
           Q     PAD++FV+++KPH +F+RDG+D++   +ISL EAL G ++N+  LDGR + +  
Sbjct: 69  QTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVF 128
Query: 238 TDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRAL 290
            D+I+PG    +P EG+P+ K P K+G+LII+F+++FP R+    ++ L++ L
Sbjct: 129 KDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 181

>pdb|3AGX|A Chain A, Crystal Structure Of Human Hsp40 Hdj1 Peptide-Binding Domain Length = 181

Iteration: 1
 Score =  159 bits (401), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 80/173 (46%), Positives = 123/173 (71%), Gaps = 5/173 (2%)
Query: 121 LLCTLEELYKGARKKMKIS--RVLPDHFGKPITVQE-ILKIDIKPGWKKGTKITFPEKGN 177
           L  +LEE+Y G  KKMKIS  R+ PD  GK I  ++ IL I++K GWK+GTKITFP++G+
Sbjct: 9   LRVSLEEIYSGCTKKMKISHKRLNPD--GKSIRNEDKILTIEVKKGWKEGTKITFPKEGD 66
Query: 178 QEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPV 237
           Q     PAD++FV+++KPH +F+RDG+D++   +ISL EAL G ++N+  LDGR + +  
Sbjct: 67  QTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVF 126
Query: 238 TDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRAL 290
            D+I+PG    +P EG+P+ K P K+G+LII+F+++FP R+    ++ L++ L
Sbjct: 127 KDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 179

>pdb|2Q2G|A Chain A, Crystal Structure Of Dimerization Domain Of Hsp40 From Cryptosporidium Parvum, Cgd2_1800 Length = 180

Iteration: 1
 Score =  155 bits (391), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 114/175 (65%), Gaps = 4/175 (2%)
Query: 118 ETQLLCTLEELYKGARKKMKISR-VLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKG 176
           E  LL TLEELY G RKK+K++R    +H  K    + I++++IKPGWK GTK+T+  +G
Sbjct: 7   EVPLLVTLEELYLGKRKKIKVTRKRFIEH--KVRNEENIVEVEIKPGWKDGTKLTYSGEG 64
Query: 177 NQE-PGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTL 235
           +QE PG  P DL+ +++ K H  F RD   L+    I L+ ALTG +  +T LD RNL +
Sbjct: 65  DQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIXKVTIPLVRALTGFTCPVTTLDNRNLQI 124
Query: 236 PVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRAL 290
           P+ +I+ P +  ++PNEG PI   P +KG+LI++FDI FP  LT EQK  +K AL
Sbjct: 125 PIKEIVNPKTRKIVPNEGXPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEAL 179

>pdb|1C3G|A Chain A, S. Cerevisiae Heat Shock Protein 40 Sis1 Length = 170

Iteration: 1
 Score =  117 bits (292), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 63/168 (37%), Positives = 93/168 (55%), Gaps = 5/168 (2%)
Query: 117 IETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKG 176
           ++  L  +LE+L+ G +K  KI R  P    +   +     I +KPGWK GTKIT+  +G
Sbjct: 3   VQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQID----IQLKPGWKAGTKITYKNQG 58
Query: 177 NQEPGLPP-ADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTL 235
           +  P       L FV++EK H  F+RDG+DL+    +S  E+L G S  +  +DGR L L
Sbjct: 59  DYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPL 118
Query: 236 PVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQK 283
                +QP      P +GMP  K+PS++GNLI+K+ + +P  L   QK
Sbjct: 119 SRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQK 166

>pdb|2B26|A Chain A, The Crystal Structure Of The Protein Complex Of Yeast Hsp40 Sis1 And Hsp70 Ssa1 Length = 173

Iteration: 1
 Score =  117 bits (292), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 63/168 (37%), Positives = 93/168 (55%), Gaps = 5/168 (2%)
Query: 117 IETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKG 176
           ++  L  +LE+L+ G +K  KI R  P    +   +     I +KPGWK GTKIT+  +G
Sbjct: 3   VQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQID----IQLKPGWKAGTKITYKNQG 58
Query: 177 NQEPGLPP-ADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTL 235
           +  P       L FV++EK H  F+RDG+DL+    +S  E+L G S  +  +DGR L L
Sbjct: 59  DYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPL 118
Query: 236 PVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQK 283
                +QP      P +GMP  K+PS++GNLI+K+ + +P  L   QK
Sbjct: 119 SRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQK 166

>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 44/78 (56%), Positives = 56/78 (71%)
Query: 3  VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRK 62
            YY IL V R A+ DD+KK+Y+R A++WHPDKNP   + AE KFK ++EAY+VLSD  K
Sbjct: 2  ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHK 61
Query: 63 RQIYDLYGPEGLKASDFG 80
          R+IYD YG EGL  +  G
Sbjct: 62 REIYDRYGREGLTGTGTG 79

>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 44/76 (57%), Positives = 60/76 (78%), Gaps = 2/76 (2%)
Query: 2  GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPR 61
          G DYY  L ++RGA+++++K++Y+R A+++HPDKN      AE KFK I+EAYDVLSDPR
Sbjct: 2  GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPG--AEEKFKEIAEAYDVLSDPR 59
Query: 62 KRQIYDLYGPEGLKAS 77
          KR+I+D YG EGLK S
Sbjct: 60 KREIFDRYGEEGLKGS 75

>pdb|1NLT|A Chain A, The Crystal Structure Of Hsp40 Ydj1 Length = 248

Iteration: 1
 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 53/133 (39%), Positives = 80/133 (60%), Gaps = 4/133 (3%)
Query: 153 QEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKI 212
           ++IL++ ++PG K G +I F  + +Q P + P D++F+V E+PH  F+RDG+DLV   +I
Sbjct: 111 RKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEI 170
Query: 213 SLLEALTGLSLNLTALDGRNLTLPVT--DIIQPGSEVVIPNEGMPISKDPSKKGNLIIKF 270
            LL A+ G    L  + G  L + +   ++I PG   VI  +GMPI K     GNLIIKF
Sbjct: 171 DLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPK-YGGYGNLIIKF 229
Query: 271 DIMFP-SRLTAEQ 282
            I  P +  T+E+
Sbjct: 230 TIKDPENHFTSEE 242

>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 54/68 (79%)
Query: 3  VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRK 62
          VDYY +L V R A+ + +KK+Y++LA+KWHPDKNP   ++AE +FK ++EAY+VLSD +K
Sbjct: 9  VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKK 68
Query: 63 RQIYDLYG 70
          R IYD YG
Sbjct: 69 RDIYDRYG 76

>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92

Iteration: 1
 Score = 88.6 bits (218), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/67 (55%), Positives = 53/67 (79%)
Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          +YY +L V   A+ +D+KK+Y++LA++WHPDKNP   ++AE KFKL+SEAY+VLSD +KR
Sbjct: 10 NYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKR 69
Query: 64 QIYDLYG 70
           +YD  G
Sbjct: 70 SLYDRAG 76

>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY IL VS+ A E +++K+YKRLAMK+HPD+N   +++AEAKFK I EAY+VL+D +KR
Sbjct: 4  DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQG-DKEAEAKFKEIKEAYEVLTDSQKR 62
Query: 64 QIYDLYG 70
            YD YG
Sbjct: 63 AAYDQYG 69

>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103

Iteration: 1
 Score = 84.7 bits (208), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY IL VS+ A E +++K+YKRLAMK+HPD+N   +++AEAKFK I EAY+VL+D +KR
Sbjct: 4  DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQG-DKEAEAKFKEIKEAYEVLTDSQKR 62
Query: 64 QIYDLYG 70
            YD YG
Sbjct: 63 AAYDQYG 69

>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/67 (59%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY IL VS+ A E +++K+YKRLAMK+HPD+N   +++AEAKFK I EAY+VL+D +KR
Sbjct: 4  DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQG-DKEAEAKFKEIKEAYEVLTDSQKR 62
Query: 64 QIYDLYG 70
            YD YG
Sbjct: 63 AAYDQYG 69

>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 50/67 (74%), Gaps = 2/67 (2%)
Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY IL VSRGA+++DLKK+Y+RLA+K+HPDKN A    A   FK I  AY VLS+P KR
Sbjct: 8  DYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPG--ATEAFKAIGTAYAVLSNPEKR 65
Query: 64 QIYDLYG 70
          + YD +G
Sbjct: 66 KQYDQFG 72

>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/80 (51%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Query: 2  GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPR 61
          G   Y++L + + AT DD+KKSY++LA+K+HPDKNP  N +A  KFK I+ A+ +L+D  
Sbjct: 16 GESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNP-DNPEAADKFKEINNAHAILTDAT 74
Query: 62 KRQIYDLYGPEGLK-ASDFG 80
          KR IYD YG  GL  A  FG
Sbjct: 75 KRNIYDKYGSLGLYVAEQFG 94

>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 5  YYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQ 64
          YY++L V   A++++LKK+Y+++A+K+HPDKNP   +Q    FK IS+AY+VLSD +KRQ
Sbjct: 10 YYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQ----FKQISQAYEVLSDEKKRQ 65
Query: 65 IYDLYGPE 72
          IYD  G E
Sbjct: 66 IYDQGGEE 73

>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71

Iteration: 1
 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 35/68 (51%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 5  YYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQ 64
          YY++L V   AT+++LKK+Y++LA+K+HPDKNP   +    KFK IS+AY+VLSD +KR+
Sbjct: 8  YYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGE----KFKQISQAYEVLSDAKKRE 63
Query: 65 IYDLYGPE 72
          +YD  G +
Sbjct: 64 LYDKGGEQ 71

>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/66 (51%), Positives = 49/66 (74%), Gaps = 2/66 (3%)
Query: 5  YYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQ 64
          YY+IL V + A+E  +KK++ +LAMK+HPDKN + +  AEAKF+ I+EAY+ LSD  +R+
Sbjct: 9  YYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPD--AEAKFREIAEAYETLSDANRRK 66
Query: 65 IYDLYG 70
           YD  G
Sbjct: 67 EYDTLG 72

>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/71 (47%), Positives = 50/71 (70%), Gaps = 4/71 (5%)
Query: 6  YNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQI 65
          Y++L VS  A E +LKK Y++ A+K+HPDK     +    KFK ISEA+++L+DP+KR+I
Sbjct: 11 YDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTE----KFKEISEAFEILNDPQKREI 66
Query: 66 YDLYGPEGLKA 76
          YD YG E  ++
Sbjct: 67 YDQYGLEAARS 77

>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 1  MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
          +  D Y +L VSR A++ D+KK+YK+LA +WHPDKN   +  AE +F  IS+AY++LS+ 
Sbjct: 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKN--KDPGAEDRFIQISKAYEILSNE 72
Query: 61 RKRQIYDLYG 70
           KR  YD YG
Sbjct: 73 EKRTNYDHYG 82

>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY IL V R A++ ++KK+Y +LA K+HPD N   + +A+ KF  ++EAY+VLSD  KR
Sbjct: 8  DYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNK-DDPKAKEKFSQLAEAYEVLSDEVKR 66
Query: 64 QIYDLYG 70
          + YD YG
Sbjct: 67 KQYDAYG 73

>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 122/283 (43%), Gaps = 19/283 (6%)
Query: 4   DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
           DYY IL V        +K +Y+RLA K+HPD +   +  AEAKFK ++EA++VL D ++R
Sbjct: 29  DYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEND--AEAKFKDLAEAWEVLKDEQRR 86
Query: 64  QIYDLYGPEGLKASDFGTPSYHHP-----HDTKPCATRXXXXXXHRXXXXXXXXXXXXIE 118
             YD    +      FG     H       D     +       H+            +E
Sbjct: 87  AEYDQLW-QHRNDPGFGRQRQTHEQSYSQQDFDDIFSSMFGQQAHQ-RRRQHAARGHDLE 144
Query: 119 TQLLCTLEELYKGARKKMKISRVLPDH--FGK-PITVQEILKIDIKPGWKKGTKITFPEK 175
            ++   LEE    A +   IS  LP +  FG       + L + I  G   G +I    +
Sbjct: 145 IEVAVFLEETL--AEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQ 202
Query: 176 GN-QEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLT 234
           G   E G P  DL  V+   PH +F   G++L +   ++  EA  G  + +  L   ++ 
Sbjct: 203 GTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLK-ESIL 261
Query: 235 LPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSR 277
           L V    Q G  + I  +G+ +SK  +  G+L     I+ P++
Sbjct: 262 LTVPPGSQAGQRLRIKGKGL-VSK--THTGDLFAVIKIVMPTK 301

>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          ++Y++L VS+ A+  ++++++K+LA+K HPDKNP  N  A   F  I+ AY+VL D   R
Sbjct: 22 NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNP-NNPNAHGDFLKINRAYEVLKDEDLR 80
Query: 64 QIYDLYGPEGLKASDFG 80
          + YD YG +GL+ +  G
Sbjct: 81 KKYDKYGEKGLEDNQGG 97

>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          ++Y++L VS+ A+  ++++++K+LA+K HPDKNP  N  A   F  I+ AY+VL D   R
Sbjct: 3  NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNP-NNPNAHGDFLKINRAYEVLKDEDLR 61
Query: 64 QIYDLYGPEGLKASDFG 80
          + YD YG +GL+ +  G
Sbjct: 62 KKYDKYGEKGLEDNQGG 78

>pdb|1XAO|A Chain A, Hsp40-Ydj1 Dimerization Domain Length = 121

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 199 FQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVT--DIIQPGSEVVIPNEGMPI 256
           F+RDG+DLV   +I LL A+ G    L  + G  L + +   ++I PG   VI  +GMPI
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 61
Query: 257 SKDPSKKGNLIIKFDIMFP-SRLTAEQ 282
            K     GNLIIKF I FP +  T+E+
Sbjct: 62  PKY-GGYGNLIIKFTIKFPENHFTSEE 87

>pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312 Length = 450

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Query: 4   DYYNILKVSRGATEDDLKKSYKRLAMKWHPD--KNPATNQQAEAKFKLISEAYDVLSDPR 61
           DYY IL V R A + ++ K+Y++LA++WHPD  +N    ++AE KF  I+ A +VLSDP 
Sbjct: 383 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 442
Query: 62  KRQIYD 67
            R+ +D
Sbjct: 443 XRKKFD 448

>pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk) Length = 450

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Query: 4   DYYNILKVSRGATEDDLKKSYKRLAMKWHPD--KNPATNQQAEAKFKLISEAYDVLSDPR 61
           DYY IL V R A + ++ K+Y++LA++WHPD  +N    ++AE KF  I+ A +VLSDP 
Sbjct: 383 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 442
Query: 62  KRQIYD 67
            R+ +D
Sbjct: 443 MRKKFD 448

>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The Escherichia Coli Cbpa Length = 73

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 6/66 (9%)
Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPD--KNPATNQQAEAKFKLISEAYDVLSDPR 61
          DYY I+ V        +K +Y+RLA K+HPD  K P     AEA+FK ++EA++VLSD +
Sbjct: 6  DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEP----DAEARFKEVAEAWEVLSDEQ 61
Query: 62 KRQIYD 67
          +R  YD
Sbjct: 62 RRAEYD 67

>pdb|2YUA|A Chain A, Solution Structure Of The Dnaj Domain From Human Williams- Beuren Syndrome Chromosome Region 18 Protein Length = 99

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 6  YNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQI 65
          Y++L V   AT+  +K +Y R    +HPD+N  + + AE +F  IS+AY VL     R+ 
Sbjct: 20 YDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAE-RFTRISQAYVVLGSATLRRK 78
Query: 66 YD 67
          YD
Sbjct: 79 YD 80

>pdb|1WJZ|A Chain A, Soluiotn Structure Of J-Domain Of Mouse Dnaj Like Protein Length = 94

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPA-----TNQQAEAKFKLISEAYDVLS 58
          D+Y+IL     A   DLK+ Y++L + +HPDK  A     T ++   KF  I +A+ +L 
Sbjct: 17 DWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILG 76
Query: 59 DPRKRQIYDL 68
          +   ++ YDL
Sbjct: 77 NEETKKKYDL 86

>pdb|2QSA|A Chain A, Crystal Structure Of J-Domain Of Dnaj Homolog Dnj-2 Precursor From C.Elegans Length = 109

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 6  YNILKVSRGATEDD-LKKSYKRLAMKWHPD--KNPATNQQAEAKFKLISEAYDVLSDPRK 62
          Y++L+V+R   +   L K+Y+ LA K HPD  KN      AE +F++I+ AY+ L D   
Sbjct: 18 YDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEA 77
Query: 63 RQIYDLY 69
          +  YD Y
Sbjct: 78 KTNYDYY 84

>pdb|2L6L|A Chain A, Solution Structure Of Human J-Protein Co-Chaperone, Dph4 Length = 155

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKN----PA-TNQQAEAKFKLISEAYDVLS 58
          D+Y+IL     A   DLK+ Y++L + +HPDK     PA T ++   KF  I +A+ +L 
Sbjct: 11 DWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILG 70
Query: 59 DPRKRQIYDL 68
          +   ++ YDL
Sbjct: 71 NEETKREYDL 80

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	295
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	2e-91
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	4e-89
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	1e-85
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	2e-60
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	7e-48
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	1e-42
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	2e-41
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	4e-41
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	5e-40
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	3e-39
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	1e-35
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	3e-35
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	7e-35
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	3e-34
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	3e-34
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	3e-34
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	4e-34
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	4e-34
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	9e-34
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	1e-33
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	2e-33
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	6e-33
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	1e-32
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	2e-32
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	3e-32
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	4e-28
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	7e-27
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	6e-26
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	3e-24
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	7e-21
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	2e-18
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	2e-18
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	1e-17
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	1e-16
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	2e-14
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	1e-13
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	5e-11
2guz_A	71	Mitochondrial import inner membrane translocase su	1e-10
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	1e-09
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	2e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II} Length = 180

 Score =  268 bits (687), Expect = 2e-91
 Identities = 82/178 (46%), Positives = 115/178 (64%), Gaps = 2/178 (1%)

Query: 114 PTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFP 173
           P   E  LL TLEELY G RKK+K++R       K    + I++++IKPGWK GTK+T+ 
Sbjct: 3   PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIE-HKVRNEENIVEVEIKPGWKDGTKLTYS 61

Query: 174 EKGNQE-PGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRN 232
            +G+QE PG  P DL+ +++ K H  F RD   L++   I L+ ALTG +  +T LD RN
Sbjct: 62  GEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRN 121

Query: 233 LTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRAL 290
           L +P+ +I+ P +  ++PNEGMPI   P +KG+LI++FDI FP  LT EQK  +K AL
Sbjct: 122 LQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEAL 179

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A Length = 181

 Score =  262 bits (671), Expect = 4e-89
 Identities = 78/176 (44%), Positives = 122/176 (69%), Gaps = 1/176 (0%)

Query: 116 PIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQE-ILKIDIKPGWKKGTKITFPE 174
           P+   L  +LEE+Y G  KKMKIS    +  GK I  ++ IL I++K GWK+GTKITFP+
Sbjct: 4   PVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPK 63

Query: 175 KGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLT 234
           +G+Q     PAD++FV+++KPH +F+RDG+D++   +ISL EAL G ++N+  LDGR + 
Sbjct: 64  EGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIP 123

Query: 235 LPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRAL 290
           +   D+I+PG    +P EG+P+ K P K+G+LII+F+++FP R+    ++ L++ L
Sbjct: 124 VVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 179

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A Length = 170

 Score =  253 bits (648), Expect = 1e-85
 Identities = 62/172 (36%), Positives = 94/172 (54%), Gaps = 5/172 (2%)

Query: 116 PIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEK 175
            ++  L  +LE+L+ G +K  KI R          + +  + I +KPGWK GTKIT+  +
Sbjct: 2   TVQVNLPVSLEDLFVGKKKSFKIGR----KGPHGASEKTQIDIQLKPGWKAGTKITYKNQ 57

Query: 176 GNQEPGL-PPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLT 234
           G+  P       L FV++EK H  F+RDG+DL+    +S  E+L G S  +  +DGR L 
Sbjct: 58  GDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLP 117

Query: 235 LPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDL 286
           L     +QP      P +GMP  K+PS++GNLI+K+ + +P  L   QK  +
Sbjct: 118 LSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAI 169

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329

 Score =  194 bits (494), Expect = 2e-60
 Identities = 68/286 (23%), Positives = 117/286 (40%), Gaps = 13/286 (4%)

Query: 4   DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
           DYY IL V        +K +Y+RLA K+HPD +      AEAKFK ++EA++VL D ++R
Sbjct: 29  DYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSK--ENDAEAKFKDLAEAWEVLKDEQRR 86

Query: 64  QIYDLYGPEGLKASDFGTPSYHHPHDTKPCATRNNNNNNHRAGGAGPKPTPTP---IETQ 120
             YD                 H    ++       ++   +      +        +E +
Sbjct: 87  AEYDQLWQHRNDPGFGRQRQTHEQSYSQQDFDDIFSSMFGQQAHQRRRQHAARGHDLEIE 146

Query: 121 LLCTLEELYKGARKKMKISRVLPDHFGKP-ITVQEILKIDIKPGWKKGTKITFPEKGNQ- 178
           +   LEE      + +  +  + + FG       + L + I  G   G +I    +G   
Sbjct: 147 VAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPG 206

Query: 179 EPGLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGR-NLTLPV 237
           E G P  DL  V+   PH +F   G++L +   ++  EA  G  + +  L     LT+P 
Sbjct: 207 ENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPP 266

Query: 238 TDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQK 283
               Q G  + I  +G+      +  G+L     I+ P++   + +
Sbjct: 267 G--SQAGQRLRIKGKGLV---SKTHTGDLFAVIKIVMPTKPDEKAR 307

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1 Length = 248

 Score =  159 bits (404), Expect = 7e-48
 Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 5/141 (3%)

Query: 151 TVQE--ILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVV 208
              E  IL++ ++PG K G +I F  + +Q P + P D++F+V E+PH  F+RDG+DLV 
Sbjct: 107 VENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVY 166

Query: 209 NHKISLLEALTGLSLNLTALDGRNLTL--PVTDIIQPGSEVVIPNEGMPISKDPSKKGNL 266
             +I LL A+ G    L  + G  L +     ++I PG   VI  +GMPI K     GNL
Sbjct: 167 EAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGG-YGNL 225

Query: 267 IIKFDIMFPSRLTAEQKSDLK 287
           IIKF I  P      +++  K
Sbjct: 226 IIKFTIKDPENHFTSEENLKK 246

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99

 Score =  140 bits (356), Expect = 1e-42
 Identities = 47/96 (48%), Positives = 59/96 (61%), Gaps = 9/96 (9%)

Query: 3  VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRK 62
            YY IL V R A+ DD+KK+Y+R A++WHPDKNP   + AE KFK ++EAY+VLSD  K
Sbjct: 2  ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHK 61

Query: 63 RQIYDLYGPEGLKAS---------DFGTPSYHHPHD 89
          R+IYD YG EGL  +           G P   H H 
Sbjct: 62 REIYDRYGREGLTGTGTGPSRAEAGSGGPGLEHHHH 97

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77

 Score =  137 bits (347), Expect = 2e-41
 Identities = 45/77 (58%), Positives = 61/77 (79%), Gaps = 2/77 (2%)

Query: 1  MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
          MG DYY  L ++RGA+++++K++Y+R A+++HPDKN      AE KFK I+EAYDVLSDP
Sbjct: 1  MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK--EPGAEEKFKEIAEAYDVLSDP 58

Query: 61 RKRQIYDLYGPEGLKAS 77
          RKR+I+D YG EGLK S
Sbjct: 59 RKREIFDRYGEEGLKGS 75

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92

 Score =  137 bits (346), Expect = 4e-41
 Identities = 38/83 (45%), Positives = 57/83 (68%)

Query: 3  VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRK 62
           +YY +L V   A+ +D+KK+Y++LA++WHPDKNP   ++AE KFKL+SEAY+VLSD +K
Sbjct: 9  ANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKK 68

Query: 63 RQIYDLYGPEGLKASDFGTPSYH 85
          R +YD  G +  +A    +    
Sbjct: 69 RSLYDRAGCDSWRAGGGASGPSS 91

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82

 Score =  133 bits (337), Expect = 5e-40
 Identities = 39/73 (53%), Positives = 54/73 (73%)

Query: 3  VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRK 62
          VDYY +L V R A+ + +KK+Y++LA+KWHPDKNP   ++AE +FK ++EAY+VLSD +K
Sbjct: 9  VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKK 68

Query: 63 RQIYDLYGPEGLK 75
          R IYD YG     
Sbjct: 69 RDIYDRYGSGPSS 81

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109

 Score =  132 bits (334), Expect = 3e-39
 Identities = 38/80 (47%), Positives = 54/80 (67%), Gaps = 1/80 (1%)

Query: 1  MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
           G   Y++L + + AT DD+KKSY++LA+K+HPDKNP  N +A  KFK I+ A+ +L+D 
Sbjct: 15 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNP-DNPEAADKFKEINNAHAILTDA 73

Query: 61 RKRQIYDLYGPEGLKASDFG 80
           KR IYD YG  GL  ++  
Sbjct: 74 TKRNIYDKYGSLGLYVAEQF 93

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210

 Score =  126 bits (318), Expect = 1e-35
 Identities = 32/77 (41%), Positives = 52/77 (67%), Gaps = 1/77 (1%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          ++Y++L VS+ A+  ++++++K+LA+K HPDKNP  N  A   F  I+ AY+VL D   R
Sbjct: 3  NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPN-NPNAHGDFLKINRAYEVLKDEDLR 61

Query: 64 QIYDLYGPEGLKASDFG 80
          + YD YG +GL+ +  G
Sbjct: 62 KKYDKYGEKGLEDNQGG 78

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae} Length = 121

 Score =  122 bits (309), Expect = 3e-35
 Identities = 38/96 (39%), Positives = 49/96 (51%), Gaps = 5/96 (5%)

Query: 199 FQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVT--DIIQPGSEVVIPNEGMPI 256
           F+RDG+DLV   +I LL A+ G    L  + G  L + +   ++I PG   VI  +GMPI
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 61

Query: 257 SKDPSKKGNLIIKFDIMFPSRLTA--EQKSDLKRAL 290
            K     GNLIIKF I FP       E    L+  L
Sbjct: 62  PKYG-GYGNLIIKFTIKFPENHFTSEENLKKLEEIL 96

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103

 Score =  120 bits (304), Expect = 7e-35
 Identities = 41/77 (53%), Positives = 55/77 (71%), Gaps = 1/77 (1%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY IL VS+ A E +++K+YKRLAMK+HPD+N   +++AEAKFK I EAY+VL+D +KR
Sbjct: 4  DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQG-DKEAEAKFKEIKEAYEVLTDSQKR 62

Query: 64 QIYDLYGPEGLKASDFG 80
            YD YG    +    G
Sbjct: 63 AAYDQYGHAAFEQGGMG 79

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73

 Score =  118 bits (298), Expect = 3e-34
 Identities = 35/69 (50%), Positives = 51/69 (73%), Gaps = 4/69 (5%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
           YY++L V   A++++LKK+Y+++A+K+HPDKNP        +FK IS+AY+VLSD +KR
Sbjct: 9  GYYDVLGVKPDASDNELKKAYRKMALKFHPDKNP----DGAEQFKQISQAYEVLSDEKKR 64

Query: 64 QIYDLYGPE 72
          QIYD  G E
Sbjct: 65 QIYDQGGEE 73

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92

 Score =  118 bits (299), Expect = 3e-34
 Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 4/80 (5%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
            Y++L VS  A E +LKK Y++ A+K+HPDK          KFK ISEA+++L+DP+KR
Sbjct: 9  KLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTG----DTEKFKEISEAFEILNDPQKR 64

Query: 64 QIYDLYGPEGLKASDFGTPS 83
          +IYD YG E  ++       
Sbjct: 65 EIYDQYGLEAARSGGPSFGP 84

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score =  119 bits (299), Expect = 3e-34
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 1/77 (1%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
            Y++L V   AT+  +K +Y R    +HPD+N   + +A  +F  IS+AY VL     R
Sbjct: 18 ALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSG-SAEAAERFTRISQAYVVLGSATLR 76

Query: 64 QIYDLYGPEGLKASDFG 80
          + YD            G
Sbjct: 77 RKYDRGLLSDEDLRGPG 93

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112

 Score =  119 bits (300), Expect = 4e-34
 Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 1/74 (1%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY +L     ++ + +   +K  A++ HPDK+P  N +A   F+ + +A ++L++   R
Sbjct: 21 DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPE-NPKAVETFQKLQKAKEILTNEESR 79

Query: 64 QIYDLYGPEGLKAS 77
            YD +    +   
Sbjct: 80 ARYDHWRRSQMSMP 93

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88

 Score =  118 bits (298), Expect = 4e-34
 Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)

Query: 1  MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
          +  D Y +L VSR A++ D+KK+YK+LA +WHPDKN   +  AE +F  IS+AY++LS+ 
Sbjct: 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNK--DPGAEDRFIQISKAYEILSNE 72

Query: 61 RKRQIYDLYGPEGLKA 76
           KR  YD YG      
Sbjct: 73 EKRTNYDHYGSGPSSG 88

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155

 Score =  119 bits (301), Expect = 9e-34
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 5/75 (6%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNP-----ATNQQAEAKFKLISEAYDVLS 58
          D+Y+IL     A   DLK+ Y++L + +HPDK        T ++   KF  I +A+ +L 
Sbjct: 11 DWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILG 70

Query: 59 DPRKRQIYDLYGPEG 73
          +   ++ YDL   E 
Sbjct: 71 NEETKREYDLQRCED 85

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score =  117 bits (295), Expect = 1e-33
 Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 2/77 (2%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
           YY+IL V + A+E  +KK++ +LAMK+HPDKN   +  AEAKF+ I+EAY+ LSD  +R
Sbjct: 8  SYYDILGVPKSASERQIKKAFHKLAMKYHPDKNK--SPDAEAKFREIAEAYETLSDANRR 65

Query: 64 QIYDLYGPEGLKASDFG 80
          + YD  G     +    
Sbjct: 66 KEYDTLGHSAFTSGKGQ 82

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score =  116 bits (292), Expect = 2e-33
 Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 2/73 (2%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY IL VSRGA+++DLKK+Y+RLA+K+HPDKN      A   FK I  AY VLS+P KR
Sbjct: 8  DYYEILGVSRGASDEDLKKAYRRLALKFHPDKNH--APGATEAFKAIGTAYAVLSNPEKR 65

Query: 64 QIYDLYGPEGLKA 76
          + YD +G      
Sbjct: 66 KQYDQFGSGPSSG 78

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score =  115 bits (289), Expect = 6e-33
 Identities = 34/70 (48%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY IL V R A++ ++KK+Y +LA K+HPD N   + +A+ KF  ++EAY+VLSD  KR
Sbjct: 8  DYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKD-DPKAKEKFSQLAEAYEVLSDEVKR 66

Query: 64 QIYDLYGPEG 73
          + YD YG   
Sbjct: 67 KQYDAYGSGP 76

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88

 Score =  114 bits (288), Expect = 1e-32
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          +  ++++ +    E + KK  +RL +KWHPDKNP  +  A   FK +    + L    K+
Sbjct: 17 EVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLE---KQ 73

Query: 64 QIYDLYGPEGLKAS 77
             D       + +
Sbjct: 74 AFLDQNADRASRRT 87

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94

 Score =  114 bits (286), Expect = 2e-32
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 5/72 (6%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNP-----ATNQQAEAKFKLISEAYDVLS 58
          D+Y+IL     A   DLK+ Y++L + +HPDK        T ++   KF  I +A+ +L 
Sbjct: 17 DWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILG 76

Query: 59 DPRKRQIYDLYG 70
          +   ++ YDL  
Sbjct: 77 NEETKKKYDLQR 88

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109

 Score =  114 bits (287), Expect = 3e-32
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 4  DYYNILKVSRGA-TEDDLKKSYKRLAMKWHPDKNP--ATNQQAEAKFKLISEAYDVLSDP 60
          + Y++L+V+R    +  L K+Y+ LA K HPD+         AE +F++I+ AY+ L D 
Sbjct: 16 NCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDD 75

Query: 61 RKRQIYDLYGPEG 73
            +  YD Y    
Sbjct: 76 EAKTNYDYYLDHP 88

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174

 Score =  105 bits (264), Expect = 4e-28
 Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 7/81 (8%)

Query: 4  DYYNILKVSRGATED--DLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPR 61
             ++L + R A  +   ++K+Y +   ++HPDK        E K K ++  Y  + D  
Sbjct: 12 QLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGV 66

Query: 62 KRQIYDLYGPEGLKASDFGTP 82
          K      +G        F + 
Sbjct: 67 KYAHQPDFGGFWDATEVFASS 87

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 99.8 bits (249), Expect = 7e-27
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          D +++L V  GA+ D++ K+Y++LA+  HPDK  A    +E  FK +  A   L    K 
Sbjct: 28 DSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPG--SEDAFKAVVNARTALLKNIKS 85

Query: 64 QIYD 67
              
Sbjct: 86 GPSS 89

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score = 98.0 bits (244), Expect = 6e-26
 Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 9/87 (10%)

Query: 4  DYYNILKVSRGATED--DLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPR 61
             ++L + R A  +   ++K+Y +   ++HPDK        E K K ++  Y  + D  
Sbjct: 9  QLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGV 63

Query: 62 KRQIYDLYGPEGLKASD--FGTPSYHH 86
          K      +G          +GT  +  
Sbjct: 64 KYAHQPDFGGFWDATEIPTYGTDEWEQ 90

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780

 Score =  101 bits (253), Expect = 3e-24
 Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 14/151 (9%)

Query: 4   DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
           ++Y++L VS+ A+  ++++++K+LA+K HPDKNP  N  A   F  I+ AY+VL D   R
Sbjct: 22  NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPN-NPNAHGDFLKINRAYEVLKDEDLR 80

Query: 64  QIYDLYGPEGLKASDFGTPSYHHPHDTKPCATRNNNNNNHRAGGAGPKPTPTPIETQL-- 121
           + YD YG +GL+ +  G       +        ++                +     +  
Sbjct: 81  KKYDKYGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFDAAVNSGELWFVNF 140

Query: 122 ------LC-----TLEELYKGARKKMKISRV 141
                        T  E  K     ++I  V
Sbjct: 141 YSPGSSHSHDLAPTWREFAKEVDGLLRIGAV 171

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450

 Score = 90.9 bits (226), Expect = 7e-21
 Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 2/66 (3%)

Query: 4   DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQ--QAEAKFKLISEAYDVLSDPR 61
           DYY IL V R A + ++ K+Y++LA++WHPD      +  +AE KF  I+ A +VLSDP 
Sbjct: 383 DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPE 442

Query: 62  KRQIYD 67
            R+ +D
Sbjct: 443 MRKKFD 448

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171

 Score = 80.0 bits (197), Expect = 2e-18
 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 3  VDYYNILKVSRGATED--DLKKSYKRLAMKWHPDKNPATNQ----QAEAKFKLISEAYDV 56
          +DY+ +  +      D   L   ++ L  ++HPDK  + +Q     A  +   I++A+  
Sbjct: 1  MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQT 60

Query: 57 LSDPRKRQIYDLY 69
          L  P  R  Y L 
Sbjct: 61 LRHPLMRAEYLLS 73

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181

 Score = 78.1 bits (192), Expect = 1e-17
 Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 11/93 (11%)

Query: 4   DYYNILKVSRGAT-------EDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDV 56
            +Y +   +           +  L+K Y++L  + HPD       Q   +   +++AY  
Sbjct: 12  TFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQ----QGSEQSSTLNQAYHT 67

Query: 57  LSDPRKRQIYDLYGPEGLKASDFGTPSYHHPHD 89
           L DP +R  Y L     +  +   T +     D
Sbjct: 68  LKDPLRRSQYMLKLLRNIDLTQEQTSNEVTTSD 100

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 74.9 bits (183), Expect = 1e-16
 Identities = 13/67 (19%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 2   GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQ--AEAKFKLISEAYDVLSD 59
           G   +  + ++   T + +KK Y++  +  HPDK      +  A+  F  +++A+    +
Sbjct: 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFEN 175

Query: 60  PRKRQIY 66
             ++ +Y
Sbjct: 176 QGQKPLY 182

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207

 Score = 70.1 bits (171), Expect = 2e-14
 Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)

Query: 4   DYYNILKVSRGATED--DLKKSYKRLAMKWHPDKNPATNQ----QAEAKFKLISEAYDVL 57
           DY++++  +R    D   L+  Y++L    HPD     +Q     +E    L+++AY  L
Sbjct: 44  DYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTL 103

Query: 58  SDPRKRQIYDL 68
             P  R +Y L
Sbjct: 104 LAPLSRGLYLL 114

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79

 Score = 64.2 bits (156), Expect = 1e-13
 Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 7/69 (10%)

Query: 4  DYYNILKVSRGATED--DLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPR 61
              +LK+ R    D   ++++YK+ ++  HPDK       + A  + ++  +       
Sbjct: 12 RLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG-----GSHALMQELNSLWGTFKTEV 66

Query: 62 KRQIYDLYG 70
               +L G
Sbjct: 67 YNLRMNLGG 75

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 57.3 bits (138), Expect = 5e-11
 Identities = 10/56 (17%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 6  YNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQ--AEAKFKLISEAYDVLSD 59
          +  + ++   T + +KK Y++  +  HP K      +  A+  F  +++A+    +
Sbjct: 36 WKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71

 Score = 55.4 bits (134), Expect = 1e-10
 Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 6/62 (9%)

Query: 4  DYYNILKVSRGA-TEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRK 62
          +   IL ++    T+  LK+ ++++ +  HPDK  +     +     I+EA D L     
Sbjct: 15 EALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATK-----INEAKDFLEKRGI 69

Query: 63 RQ 64
           +
Sbjct: 70 SK 71

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp} Length = 109

 Score = 53.7 bits (130), Expect = 1e-09
 Identities = 19/94 (20%), Positives = 38/94 (40%), Gaps = 6/94 (6%)

Query: 195 PHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGR-NLTLPVTDIIQPGSEVVIPNEG 253
            H +F   G++L +   ++  EA  G  + +  L     LT+P     Q G  + I  +G
Sbjct: 3   AHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPG--SQAGQRLRIKGKG 60

Query: 254 MPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLK 287
           +         G+L     I+ P++   + +   +
Sbjct: 61  LVSKTHT---GDLFAVIKIVMPTKPDEKARELWQ 91

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score = 53.5 bits (128), Expect = 2e-09
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 6/59 (10%)

Query: 6   YNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQ------AEAKFKLISEAYDVLS 58
           +  + +      + ++KSY+R  +  HPDK             AE  F+L+ EA+D  +
Sbjct: 43  WKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFN 101

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 4e-04
 Identities = 42/298 (14%), Positives = 84/298 (28%), Gaps = 69/298 (23%)

Query: 17  EDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVL-SDPRKRQIYDLYGPEGLK 75
           E+ L+ +YK L             +Q     ++  E  D L +D +    Y++   +   
Sbjct: 84  EEVLRINYKFLMSPIK-----TEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQ--- 135

Query: 76  ASDFGTPSYHHPHDT-KPCATRNNNNNN---HRAGGAGPKPTPTPIETQLLCTLEELYKG 131
                      P+   +          N       G+G K          +  L+     
Sbjct: 136 -----------PYLKLRQALLELRPAKNVLIDGVLGSG-K--------TWV-ALDVC--- 171

Query: 132 ARKKMKISRVLPDH-----FGKPITVQEILKI------DIKPGWKKGTKITFPEKGNQEP 180
                K+   +             + + +L++       I P W   +  +   K     
Sbjct: 172 --LSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229

Query: 181 GLPPADLIFVVEEKPHAVFQRDGNDLV---VNHKISLLEALTGLS--LNLTALDGRNLTL 235
                  +   +   + +       LV   V +      A       L  T    R    
Sbjct: 230 IQAELRRLLKSKPYENCL-------LVLLNVQNA-KAWNAFNLSCKILLTT----RFKQ- 276

Query: 236 PVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALGGV 293
            VTD +   +   I  +   ++  P +  +L++K+    P  L  E  +   R L  +
Sbjct: 277 -VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSII 333

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	295
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	100.0
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	100.0
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	100.0
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	100.0
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	100.0
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	99.95
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	99.94
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	99.9
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	99.88
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	99.88
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	99.87
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	99.87
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	99.86
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	99.86
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	99.85
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	99.85
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	99.85
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	99.84
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	99.84
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	99.83
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	99.82
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	99.81
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	99.79
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	99.78
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	99.77
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	99.75
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	99.75
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	99.75
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	99.75
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	99.72
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.7
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	99.69
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	99.69
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.69
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.69
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	99.67
2guz_A	71	Mitochondrial import inner membrane translocase su	99.65
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	99.63
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	99.62
3i38_A	109	Putative chaperone DNAJ; structural genomics, prot	99.21
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	99.09
1xao_A	121	YDJ1, mitochondrial protein import protein MAS5; b	99.08
2q2g_A	180	HSP40 protein, heat shock 40 kDa protein, putative	98.94
1c3g_A	170	Heat shock protein 40; beta sheets, short helices,	98.92
3agx_A	181	DNAJ homolog subfamily B member 1; chaperone; 1.85	98.89
2guz_B	65	Mitochondrial import inner membrane translocase su	98.86
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	98.81
1nlt_A	248	Protein YDJ1, mitochondrial protein import protein	98.7
2ctt_A	104	DNAJ homolog subfamily A member 3; ZING finger, be	93.96

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=100.00  E-value=5e-68  Score=488.77  Aligned_cols=276  Identities=24%  Similarity=0.368  Sum_probs=164.6

Q ss_pred             CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc---CC
Q 022539            3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS---DF   79 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~---~~   79 (295)
                      +|||+||||+++||.+|||+|||+||++||||+|++  ..|+++|++|++||++|+||.+|+.||+|+..+...+   .+
T Consensus        28 ~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~--~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~~~  105 (329)
T 3lz8_A           28 KDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE--NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQR  105 (329)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC--hHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCccccc
Confidence            799999999999999999999999999999999975  3688999999999999999999999999854422111   01


Q ss_pred             C--CCCCCCCCCC-CccccCCCCCCCCCCC----CCCCCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEE
Q 022539           80 G--TPSYHHPHDT-KPCATRNNNNNNHRAG----GAGPKPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITV  152 (295)
Q Consensus        80 g--~~~~~~~~~~-~~f~~~~~~~~~f~~~----~~~~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~  152 (295)
                      +  +++ |...+. ..|..      .|+++    +.+.++++.|+.++|.|||+|+|+|+++++.+.+.++++.|+++..
T Consensus       106 ~~~~~~-f~~~~f~diF~~------~Fg~~g~~~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~  178 (329)
T 3lz8_A          106 QTHEQS-YSQQDFDDIFSS------MFGQQAHQRRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESE  178 (329)
T ss_dssp             --------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEE
T ss_pred             ccccCC-cCCCchhhhhHh------hhcCcCCCCCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEe
Confidence            0  011 110000 11211      12211    1123567999999999999999999999999999999988875443


Q ss_pred             -EEEEEEEeCCCCcCCCeEecCCCCCCCC-CCCCccEEEEEEEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCC
Q 022539          153 -QEILKIDIKPGWKKGTKITFPEKGNQEP-GLPPADLIFVVEEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDG  230 (295)
Q Consensus       153 -~~~l~V~Ip~G~~~G~~i~~~g~G~~~~-~~~~GDliv~i~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g  230 (295)
                       .++++|+||||+++|++|+|+|+|++++ ++.+|||+|+|+++||+.|+|+|+||+++++|++++|+||++++|+|+||
T Consensus       179 ~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG  258 (329)
T 3lz8_A          179 TPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKE  258 (329)
T ss_dssp             EEEEEEEEECTTCCTTCEEEESSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSS
T ss_pred             cceEEEEeCCCCCCCCCEEEEcccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCC
Confidence             6789999999999999999999999974 67899999999999999999999999999999999999999999999999


Q ss_pred             cEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHhC
Q 022539          231 RNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       231 ~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~~l~~~l~  291 (295)
                      + ++|+||+++++|+++||+|+|||..   +.+|||||+|+|.||+.||++|+++|+++..
T Consensus       259 ~-v~l~ip~gt~~g~~~rl~G~GmP~~---~~rGDL~v~~~V~~P~~l~~~q~~~l~~~~~  315 (329)
T 3lz8_A          259 S-ILLTVPPGSQAGQRLRIKGKGLVSK---THTGDLFAVIKIVMPTKPDEKARELWQQLAA  315 (329)
T ss_dssp             C-EEEEECTTCCTTCEEEETTCSCBCS---SCBCCEEEEEEECCCSSCCHHHHHHHHHHHH
T ss_pred             C-EEEEECCCCCCCCEEEEcCCCCCCC---CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence            7 7999999999999999999999965   3689999999999999999999999999865

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=100.00  E-value=9.4e-49  Score=332.39  Aligned_cols=179  Identities=43%  Similarity=0.809  Sum_probs=165.7

Q ss_pred             CCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCc-EEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEEEE
Q 022539          114 PTPIETQLLCTLEELYKGARKKMKISRVLPDHFGK-PITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVE  192 (295)
Q Consensus       114 ~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~-~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i~  192 (295)
                      ++|+++.|.|||+|||+|+++++.+.+.|..|.|+ ++.+.++++|.||||+++|++|+|+|+|++++++.+|||+|+|+
T Consensus         2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i~   81 (181)
T 3agx_A            2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLK   81 (181)
T ss_dssp             ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSSCCCCEEEEEE
T ss_pred             CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCCCCcccEEEEEE
Confidence            46899999999999999999999999888766653 67788999999999999999999999999998889999999999


Q ss_pred             EeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEE
Q 022539          193 EKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDI  272 (295)
Q Consensus       193 v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v  272 (295)
                      ++||+.|+|+|+||+++++||+++|++|+++.|+|+||+++.|++|+++++|+++||+|+|||..++++.+|||||+|+|
T Consensus        82 ~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V  161 (181)
T 3agx_A           82 DKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEV  161 (181)
T ss_dssp             ECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEE
T ss_pred             EeccccceeeCCcEEEEEEcCHHHHhCCCEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEE
Confidence            99999999999999999999999999999999999999889999999999999999999999987645678999999999


Q ss_pred             ECCCCCCHHHHHHHHHHhCC
Q 022539          273 MFPSRLTAEQKSDLKRALGG  292 (295)
Q Consensus       273 ~~P~~l~~~~~~~l~~~l~~  292 (295)
                      .||++||++|+++|+++++.
T Consensus       162 ~~P~~ls~~q~~~l~~~~~~  181 (181)
T 3agx_A          162 IFPERIPQTSRTVLEQVLPI  181 (181)
T ss_dssp             ECCSCCCHHHHHHHHHHSCC
T ss_pred             ECCCCCCHHHHHHHHHhccC
Confidence            99999999999999999974

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.1e-48  Score=331.75  Aligned_cols=178  Identities=45%  Similarity=0.818  Sum_probs=167.1

Q ss_pred             CCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCC-CCCCCCccEEEEE
Q 022539          113 TPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQ-EPGLPPADLIFVV  191 (295)
Q Consensus       113 ~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~-~~~~~~GDliv~i  191 (295)
                      +++|+++.|.|||+|||+|+++++.+.+.+.|++| .+.+.++++|.|||||++|++|+|+|+|++ .+++.+|||+|+|
T Consensus         2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g-~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i   80 (180)
T 2q2g_A            2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHK-VRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLII   80 (180)
T ss_dssp             --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTE-EEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEE
T ss_pred             CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCc-eEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEE
Confidence            36799999999999999999999999999888775 677888999999999999999999999999 6888999999999


Q ss_pred             EEeCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEE
Q 022539          192 EEKPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFD  271 (295)
Q Consensus       192 ~v~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~  271 (295)
                      +++||+.|+|+|+||+++++||+++|++|+++.|+|+||+++.|++|+++++|+++||+|+|||..++++.+|||||+|+
T Consensus        81 ~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~  160 (180)
T 2q2g_A           81 QTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFD  160 (180)
T ss_dssp             EECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEE
T ss_pred             EEEecccEEEcCCEEEEEEEcCHHHHhCCCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEE
Confidence            99999999999999999999999999999999999999988999999999999999999999998765567899999999


Q ss_pred             EECCCCCCHHHHHHHHHHhC
Q 022539          272 IMFPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       272 v~~P~~l~~~~~~~l~~~l~  291 (295)
                      |.||++||++|+++|+++||
T Consensus       161 V~~P~~Ls~~q~~~l~~~~p  180 (180)
T 2q2g_A          161 ICFPKSLTPEQKKLIKEALD  180 (180)
T ss_dssp             EECCSCCCHHHHHHHHHHC-
T ss_pred             EECCCCCCHHHHHHHHHhcC
Confidence            99999999999999999985

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=100.00  E-value=6.4e-46  Score=312.05  Aligned_cols=169  Identities=37%  Similarity=0.682  Sum_probs=157.3

Q ss_pred             CCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCC-CCCCCCccEEEEEEE
Q 022539          115 TPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQ-EPGLPPADLIFVVEE  193 (295)
Q Consensus       115 ~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~-~~~~~~GDliv~i~v  193 (295)
                      +|+++.|.|||+|||+|+++++.+.+..  ++|+.  +.++++|.||||+++|++|+|+|+|++ .+++.+|||+|+|++
T Consensus         1 ~d~~~~l~islee~~~G~~k~i~~~~~~--~~G~~--~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v   76 (170)
T 1c3g_A            1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG--PHGAS--EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQE   76 (170)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEE--TTTEE--EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEE
T ss_pred             CCEEEEEEeEHHHhhCCcEEEEEEEEec--CCCcE--EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEE
Confidence            3789999999999999999999999873  46754  778999999999999999999999995 478899999999999


Q ss_pred             eCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEE
Q 022539          194 KPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIM  273 (295)
Q Consensus       194 ~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~  273 (295)
                      +||+.|+|+|+||+++++||+++|++|+++.|+|+||+++.|++|+++++|+++||+|+|||..++++.+|||||+|+|.
T Consensus        77 ~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~  156 (170)
T 1c3g_A           77 KSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVD  156 (170)
T ss_dssp             CCCSSEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCB
T ss_pred             ccCCccEEeCCcEeEEEEcCHHHHhCCCeEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEE
Confidence            99999999999999999999999999999999999998899999999999999999999999876556789999999999


Q ss_pred             CCCCCCHHHHHHHH
Q 022539          274 FPSRLTAEQKSDLK  287 (295)
Q Consensus       274 ~P~~l~~~~~~~l~  287 (295)
                      ||++||++|+++|+
T Consensus       157 ~P~~Ls~~q~~~l~  170 (170)
T 1c3g_A          157 YPISLNDAQKRAID  170 (170)
T ss_dssp             CCSSCCTTHHHHTC
T ss_pred             CCCCCCHHHHHhhC
Confidence            99999999999873

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=100.00  E-value=1.5e-44  Score=320.86  Aligned_cols=177  Identities=36%  Similarity=0.609  Sum_probs=151.1

Q ss_pred             CCCCCCCeeeecccCHHHHhcCceeEEEEeEEeeC----CC----------------C----------------------
Q 022539          110 PKPTPTPIETQLLCTLEELYKGARKKMKISRVLPD----HF----------------G----------------------  147 (295)
Q Consensus       110 ~~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~----g~----------------G----------------------  147 (295)
                      .++++.|+++.|.|||+|||+|+++++.+.+.+.|    |+                |                      
T Consensus         7 ~~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C   86 (248)
T 1nlt_A            7 GPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVC   86 (248)
T ss_dssp             -CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTC
T ss_pred             CCCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCceEEEEEEcCCCC
Confidence            34678999999999999999999999999876531    11                1                      


Q ss_pred             -------------------cEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEEEEEeCCcceeecCCceEE
Q 022539          148 -------------------KPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVVEEKPHAVFQRDGNDLVV  208 (295)
Q Consensus       148 -------------------~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i~v~~h~~f~r~g~DL~~  208 (295)
                                         .++.+.++++|.|||||++|++|+|+|+|++.+++.+|||||+|+++||+.|+|+|+||++
T Consensus        87 ~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~  166 (248)
T 1nlt_A           87 HGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVY  166 (248)
T ss_dssp             SSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEE
T ss_pred             CCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEE
Confidence                               1356778999999999999999999999999988899999999999999999999999999


Q ss_pred             EEEecHHHHhcCCEEEEeccCCcEEEEeeCCC--CCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCC--CCHHHHH
Q 022539          209 NHKISLLEALTGLSLNLTALDGRNLTLPVTDI--IQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSR--LTAEQKS  284 (295)
Q Consensus       209 ~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~--~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~--l~~~~~~  284 (295)
                      +++|||+||++|++++|+||||+.+.|+||++  +++|+++||+|+|||...++ .+|||||+|+|.||++  ||++|++
T Consensus       167 ~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q~~  245 (248)
T 1nlt_A          167 EAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEENLK  245 (248)
T ss_dssp             EEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC----------
T ss_pred             EEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHHHH
Confidence            99999999999999999999998899999987  99999999999999986644 6899999999999999  9999999


Q ss_pred             HHH
Q 022539          285 DLK  287 (295)
Q Consensus       285 ~l~  287 (295)
                      +|+
T Consensus       246 ~l~  248 (248)
T 1nlt_A          246 KLE  248 (248)
T ss_dssp             ---
T ss_pred             hhC
Confidence            885

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=99.95  E-value=1.3e-27  Score=185.82  Aligned_cols=94  Identities=19%  Similarity=0.340  Sum_probs=88.2

Q ss_pred             eCCcceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEE
Q 022539          194 KPHAVFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIM  273 (295)
Q Consensus       194 ~~h~~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~  273 (295)
                      +||+.|+|+|+||+++++||+.+|++|++++|+|+||. +.|+||+++++|+++||+|+|||..   +.+|||||+|+|.
T Consensus         2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~-~~v~ip~g~~~G~~~rl~G~G~p~~---~~~GDL~v~~~V~   77 (109)
T 3i38_A            2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGKGLVSK---THTGDLFAVIKIV   77 (109)
T ss_dssp             --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTCSCBCS---SCBCCEEEEEEEC
T ss_pred             CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEeeCCCcCcCeEEEECCccCCCC---CCCcCEEEEEEEE
Confidence            68999999999999999999999999999999999995 9999999999999999999999973   3799999999999


Q ss_pred             CCCCCCHHHHHHHHHHhC
Q 022539          274 FPSRLTAEQKSDLKRALG  291 (295)
Q Consensus       274 ~P~~l~~~~~~~l~~~l~  291 (295)
                      ||++||++|+++|++++.
T Consensus        78 ~P~~Ls~~q~~~l~~l~~   95 (109)
T 3i38_A           78 MPTKPDEKARELWQQLAA   95 (109)
T ss_dssp             CCSSCCHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHh
Confidence            999999999999999875

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=99.94  E-value=2.1e-26  Score=182.47  Aligned_cols=94  Identities=40%  Similarity=0.610  Sum_probs=85.3

Q ss_pred             ceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCC--CCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECC
Q 022539          198 VFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDI--IQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFP  275 (295)
Q Consensus       198 ~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~--~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P  275 (295)
                      .|+|+|+||+++++|||++|++|+++.|+|+||+++.|+||++  +++|+++||+|+|||..+++ .+|||||+|+|.||
T Consensus         1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P   79 (121)
T 1xao_A            1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP   79 (121)
T ss_dssp             CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred             CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence            4999999999999999999999999999999998899999988  99999999999999987644 78999999999999


Q ss_pred             CC--CCHHHHHHHHHHhCC
Q 022539          276 SR--LTAEQKSDLKRALGG  292 (295)
Q Consensus       276 ~~--l~~~~~~~l~~~l~~  292 (295)
                      +.  ||++|+++|+++++.
T Consensus        80 ~~~~ls~~q~~~l~~l~~~   98 (121)
T 1xao_A           80 ENHFTSEENLKKLEEILPP   98 (121)
T ss_dssp             CTTCSCHHHHHHHHHHSCC
T ss_pred             CCCCCCHHHHHHHHHHccc
Confidence            99  999999999999985

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.90  E-value=1.1e-24  Score=159.14  Aligned_cols=75  Identities=60%  Similarity=1.064  Sum_probs=70.2

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS   77 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~   77 (295)
                      |+.|||+||||+++||.++||+|||+|+++||||++++  +.+.+.|+.|++||++|+||.+|+.||++|.+++.++
T Consensus         1 m~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~   75 (77)
T 1hdj_A            1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE--PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGS   75 (77)
T ss_dssp             CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC--TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCSS
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccccccC
Confidence            89999999999999999999999999999999999976  3578999999999999999999999999999887643

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=99.88  E-value=9.9e-24  Score=162.62  Aligned_cols=77  Identities=52%  Similarity=0.875  Sum_probs=71.4

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCccC
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKASD   78 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~   78 (295)
                      |..|||+||||+++|+.++||+|||+|+++||||+++.+ +++.++|++|++||++|+||.+|+.||++|++++..++
T Consensus         1 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~~   77 (103)
T 1bq0_A            1 AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD-KEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGG   77 (103)
T ss_dssp             CCCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTT-CTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSCC
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcccC
Confidence            889999999999999999999999999999999999753 36789999999999999999999999999999887543

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.88  E-value=2.4e-23  Score=153.83  Aligned_cols=74  Identities=53%  Similarity=0.984  Sum_probs=68.7

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK   75 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   75 (295)
                      ..|||+||||+++|+.++||+|||+|+++||||+++...+.+.+.|++|++||++|+||.+|+.||++|+.++.
T Consensus         8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~~   81 (82)
T 2ej7_A            8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPSS   81 (82)
T ss_dssp             SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSCC
T ss_pred             CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccccC
Confidence            46999999999999999999999999999999999876557889999999999999999999999999987654

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=99.87  E-value=1.6e-23  Score=160.04  Aligned_cols=76  Identities=57%  Similarity=0.993  Sum_probs=67.5

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS   77 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~   77 (295)
                      +.|||+||||+++|+.+|||+|||+|+++||||+++...+.+.+.|+.|++||++|+||.+|+.||.+|.+++.+.
T Consensus         1 M~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~~   76 (99)
T 2lgw_A            1 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGT   76 (99)
T ss_dssp             CCCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC-----
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccCC
Confidence            3799999999999999999999999999999999987656789999999999999999999999999998877644

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.87  E-value=5.9e-23  Score=155.04  Aligned_cols=76  Identities=50%  Similarity=0.942  Sum_probs=70.5

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS   77 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~   77 (295)
                      ..|||+||||+++|+.++||+|||+|+++||||+++...+.+.+.|++|++||++|+||.+|+.||++|..++..+
T Consensus         8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~   83 (92)
T 2dmx_A            8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRAG   83 (92)
T ss_dssp             CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCCC
T ss_pred             CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccCC
Confidence            3699999999999999999999999999999999987656789999999999999999999999999999887654

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.86  E-value=7.8e-23  Score=150.01  Aligned_cols=72  Identities=47%  Similarity=0.781  Sum_probs=66.5

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGL   74 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~   74 (295)
                      ..|||+||||+++|+.++||+|||+|+++||||+++.. +++.+.|+.|++||++|+||.+|+.||++|..+.
T Consensus         6 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~   77 (79)
T 2dn9_A            6 SGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDD-PKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGPS   77 (79)
T ss_dssp             CSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSC-TTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCCS
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcCC
Confidence            57999999999999999999999999999999999754 4688999999999999999999999999997653

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.86  E-value=1e-22  Score=152.46  Aligned_cols=74  Identities=46%  Similarity=0.807  Sum_probs=68.6

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS   77 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~   77 (295)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++.  +.+.+.|++|++||++|+||.+|+.||.+|..++.++
T Consensus         6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~   79 (88)
T 2ctr_A            6 SGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS--PDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG   79 (88)
T ss_dssp             CCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS--HHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--hHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence            4799999999999999999999999999999999985  5789999999999999999999999999998776643

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.85  E-value=2.4e-22  Score=147.04  Aligned_cols=71  Identities=56%  Similarity=0.915  Sum_probs=66.1

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGL   74 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~   74 (295)
                      ..|||+||||+++|+.++||+|||+|+++||||+++.  +.+.+.|+.|++||++|+||.+|+.||++|..+.
T Consensus         6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~   76 (78)
T 2ctp_A            6 SGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA--PGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGPS   76 (78)
T ss_dssp             SCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSS--HHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCSC
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence            3699999999999999999999999999999999975  4688999999999999999999999999998653

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=99.85  E-value=2.1e-22  Score=150.79  Aligned_cols=71  Identities=49%  Similarity=0.829  Sum_probs=65.9

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCC
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEG   73 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~   73 (295)
                      +..|||+||||+++|+.++||+|||+|+++||||++++  +.+.+.|++|++||++|+||.+|+.||++|+.+
T Consensus        15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~   85 (88)
T 2cug_A           15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD--PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP   85 (88)
T ss_dssp             SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS--TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence            35799999999999999999999999999999999986  357899999999999999999999999999754

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=99.85  E-value=5e-22  Score=143.51  Aligned_cols=67  Identities=52%  Similarity=0.929  Sum_probs=61.4

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPE   72 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~   72 (295)
                      ..|||+||||+++|+.++||+|||+|+++||||++++.    .+.|+.|++||++|+||.+|+.||++|++
T Consensus         7 ~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~----~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~   73 (73)
T 2och_A            7 ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG----AEQFKQISQAYEVLSDEKKRQIYDQGGEE   73 (73)
T ss_dssp             CCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC----HHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH----HHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence            46899999999999999999999999999999999753    57999999999999999999999999863

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=99.84  E-value=2.5e-22  Score=151.54  Aligned_cols=72  Identities=47%  Similarity=0.847  Sum_probs=66.5

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS   77 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~   77 (295)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++.+    .+.|++|++||++|+||.+|+.||++|.+++..+
T Consensus         7 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~   78 (92)
T 2o37_A            7 ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD----TEKFKEISEAFEILNDPQKREIYDQYGLEAARSG   78 (92)
T ss_dssp             CCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC----HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHTT
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh----HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhcc
Confidence            47999999999999999999999999999999999764    4699999999999999999999999998877643

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.84  E-value=6.2e-22  Score=154.02  Aligned_cols=73  Identities=51%  Similarity=0.872  Sum_probs=67.7

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK   75 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   75 (295)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++.+ +++.+.|++|++||++|+||.+|+.||++|..++.
T Consensus        16 ~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~   88 (109)
T 2ctw_A           16 GESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN-PEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY   88 (109)
T ss_dssp             SCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence            57999999999999999999999999999999999864 57889999999999999999999999999977654

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=4e-22  Score=155.85  Aligned_cols=73  Identities=25%  Similarity=0.496  Sum_probs=67.7

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK   75 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   75 (295)
                      ..|||+||||+++|+.++||+|||+|+++||||+++.+ +++.+.|++|++||++|+||.+|+.||++|..++.
T Consensus        19 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~   91 (112)
T 2ctq_A           19 TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPEN-PKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS   91 (112)
T ss_dssp             CCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTC-STHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence            47999999999999999999999999999999999854 36889999999999999999999999999987664

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.82  E-value=2.5e-21  Score=148.09  Aligned_cols=67  Identities=34%  Similarity=0.569  Sum_probs=62.7

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLY   69 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~   69 (295)
                      ..|||+||||+++|+.++||+|||+|+++||||+++.+ +++.+.|++|++||++|+||.+|+.||++
T Consensus        16 ~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~   82 (99)
T 2yua_A           16 RTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGS-AEAAERFTRISQAYVVLGSATLRRKYDRG   82 (99)
T ss_dssp             SSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSC-SHHHHHHHHHHHHHHHTTSHHHHHHHHHT
T ss_pred             ccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHh
Confidence            57999999999999999999999999999999999754 46889999999999999999999999984

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=99.81  E-value=7.9e-21  Score=143.86  Aligned_cols=70  Identities=33%  Similarity=0.599  Sum_probs=63.5

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-----cHHHHHHHHHHHHHhhhcCCccccccccCCCC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPAT-----NQQAEAKFKLISEAYDVLSDPRKRQIYDLYGP   71 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~-----~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~   71 (295)
                      ..|||+||||+++|+.+|||+|||+|+++||||+++.+     ...+.+.|++|++||++|+||.+|+.||.+..
T Consensus        15 ~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~   89 (94)
T 1wjz_A           15 KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS   89 (94)
T ss_dssp             CSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence            46999999999999999999999999999999998742     24688999999999999999999999998654

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=99.79  E-value=3.1e-20  Score=160.05  Aligned_cols=74  Identities=41%  Similarity=0.785  Sum_probs=68.9

Q ss_pred             CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc
Q 022539            3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS   77 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~   77 (295)
                      +|||+||||+++|+.+|||+|||+||++||||+++.+ +++.++|++|++||++|+||.+|+.||++|+.++...
T Consensus         2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~   75 (210)
T 3apq_A            2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN   75 (210)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTC-TTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTT
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccccc
Confidence            7999999999999999999999999999999999754 4688999999999999999999999999999887644

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=99.78  E-value=1.9e-20  Score=145.65  Aligned_cols=71  Identities=34%  Similarity=0.594  Sum_probs=64.7

Q ss_pred             CCCccceecCCCCC-CHHHHHHHHHHHHHHhCCCCCCC--CcHHHHHHHHHHHHHhhhcCCccccccccCCCCC
Q 022539            2 GVDYYNILKVSRGA-TEDDLKKSYKRLAMKWHPDKNPA--TNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPE   72 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a-~~~eIk~ayr~la~~~hPd~~~~--~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~   72 (295)
                      ..|||+||||+++| +.+|||+|||+|+++||||++++  ..+.+.+.|++|++||++|+||.+|+.||+++..
T Consensus        14 ~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~   87 (109)
T 2qsa_A           14 LENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH   87 (109)
T ss_dssp             TSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred             CCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence            47999999999999 99999999999999999999974  1346889999999999999999999999998753

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.77  E-value=1.4e-19  Score=135.83  Aligned_cols=62  Identities=34%  Similarity=0.505  Sum_probs=57.6

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCcccccc
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQI   65 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~   65 (295)
                      ..|||+||||+++|+.+|||+|||+|+++||||++++  +.+.+.|++|++||++|+|+.+|+.
T Consensus        26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~   87 (90)
T 2ys8_A           26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA--PGSEDAFKAVVNARTALLKNIKSGP   87 (90)
T ss_dssp             CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC--TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHHCCcccccC
Confidence            4799999999999999999999999999999999976  3578999999999999999999874

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=99.75  E-value=4.4e-19  Score=146.41  Aligned_cols=69  Identities=32%  Similarity=0.594  Sum_probs=62.9

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHHHHHHHHhhhcCCccccccccCCC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATN-----QQAEAKFKLISEAYDVLSDPRKRQIYDLYG   70 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~-----~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g   70 (295)
                      ..|||+||||+++|+.++||+|||+|++++|||+++.+.     +.|.+.|+.|++||++|+||.+|+.||..+
T Consensus         9 ~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~   82 (155)
T 2l6l_A            9 KKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQR   82 (155)
T ss_dssp             CSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHH
T ss_pred             CCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence            469999999999999999999999999999999997642     247799999999999999999999999755

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.75  E-value=1.9e-19  Score=134.30  Aligned_cols=63  Identities=27%  Similarity=0.440  Sum_probs=58.0

Q ss_pred             CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCcccccc
Q 022539            3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQI   65 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~   65 (295)
                      .++|+||||+++|+.+|||+|||+||++||||+++++.+.+.++|++|++||++|+|...|..
T Consensus        16 ~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~   78 (88)
T 1iur_A           16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQ   78 (88)
T ss_dssp             HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccccc
Confidence            589999999999999999999999999999999987655689999999999999999887743

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=99.75  E-value=2.8e-19  Score=130.83  Aligned_cols=66  Identities=18%  Similarity=0.307  Sum_probs=59.2

Q ss_pred             CCccceecCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCC
Q 022539            3 VDYYNILKVSRG--ATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGL   74 (295)
Q Consensus         3 ~d~Y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~   74 (295)
                      .++|+||||+++  |+.++||+|||+||++||||++++     .++|++|++||++|+|+.+|.. +.||..++
T Consensus        11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~-----~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~~   78 (79)
T 1faf_A           11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS-----HALMQELNSLWGTFKTEVYNLR-MNLGGTGF   78 (79)
T ss_dssp             HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC-----HHHHHHHHHHHHHHHHHHHHHT-TCCSSCCC
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-----HHHHHHHHHHHHHHhhHHHHHH-HhcCCccC
Confidence            479999999999  999999999999999999999864     5799999999999999999988 56776553

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=99.75  E-value=5.7e-20  Score=143.58  Aligned_cols=64  Identities=25%  Similarity=0.397  Sum_probs=60.3

Q ss_pred             CCccceecCCCCCCH--HHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCC
Q 022539            3 VDYYNILKVSRGATE--DDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGP   71 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~--~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~   71 (295)
                      .|||+||||+++|+.  ++||+|||+||+++|||++++     .++|++|++||++|+||.+|+.||.+|.
T Consensus         8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~-----~e~f~~I~~AYevL~d~~~R~~~~~~~~   73 (114)
T 1gh6_A            8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGVKYAHQPDFGG   73 (114)
T ss_dssp             HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred             hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc-----HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence            589999999999999  999999999999999999975     4799999999999999999999999875

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=99.72  E-value=1.6e-19  Score=150.52  Aligned_cols=64  Identities=25%  Similarity=0.387  Sum_probs=57.6

Q ss_pred             CCccceecCCCCCC--HHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCC
Q 022539            3 VDYYNILKVSRGAT--EDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGP   71 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~--~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~   71 (295)
                      .|||+||||+++|+  .+|||+|||++|+++|||++++     +++|++|++||++|+||.+|+.||+||.
T Consensus        11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~-----~e~F~~I~~AYevLsdp~kR~~YD~~G~   76 (174)
T 2pf4_E           11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGVKYAHQPDFGG   76 (174)
T ss_dssp             HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C-----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred             ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC-----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence            58999999999999  6999999999999999999975     3799999999999999999999999996

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.70  E-value=4.8e-18  Score=142.39  Aligned_cols=64  Identities=19%  Similarity=0.371  Sum_probs=59.0

Q ss_pred             CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHHHHHHHhhhcCCccccccc
Q 022539            3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQ--QAEAKFKLISEAYDVLSDPRKRQIY   66 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~--~~~~~f~~i~~Ay~~L~d~~~r~~y   66 (295)
                      .|||++|||+++|+.++||+|||+|+++||||+++....  .|.+.|+.|++||++|+|+.+|+.|
T Consensus       117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y  182 (182)
T 1n4c_A          117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY  182 (182)
T ss_dssp             CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence            589999999999999999999999999999999975422  2889999999999999999999987

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=99.69  E-value=3.4e-18  Score=143.07  Aligned_cols=67  Identities=25%  Similarity=0.406  Sum_probs=61.0

Q ss_pred             CccceecCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCcH----HHHHHHHHHHHHhhhcCCccccccccCCC
Q 022539            4 DYYNILKVSRGA--TEDDLKKSYKRLAMKWHPDKNPATNQ----QAEAKFKLISEAYDVLSDPRKRQIYDLYG   70 (295)
Q Consensus         4 d~Y~iLgv~~~a--~~~eIk~ayr~la~~~hPd~~~~~~~----~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g   70 (295)
                      |||++|||++++  |.++||+|||+|+++||||++++..+    .|.+.|+.|++||++|+||.+|+.||...
T Consensus         2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l   74 (171)
T 1fpo_A            2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL   74 (171)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred             CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence            899999999999  99999999999999999999986432    36689999999999999999999999853

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.69  E-value=5.6e-18  Score=130.61  Aligned_cols=60  Identities=27%  Similarity=0.417  Sum_probs=52.5

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--c----HHHHHHHHHHHHHhhhcCCccc
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPAT--N----QQAEAKFKLISEAYDVLSDPRK   62 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~--~----~~~~~~f~~i~~Ay~~L~d~~~   62 (295)
                      +.|||+||+++. ||.++||+|||++|++||||+|++.  .    ..|.++|++|++||++|+|+..
T Consensus        40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~~  105 (106)
T 3ag7_A           40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLGP  105 (106)
T ss_dssp             TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred             cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCccc
Confidence            469999999996 9999999999999999999998631  1    1478999999999999999763

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.69  E-value=5.9e-18  Score=126.66  Aligned_cols=57  Identities=19%  Similarity=0.317  Sum_probs=51.6

Q ss_pred             CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHHHHHHHhhhcCC
Q 022539            3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATN--QQAEAKFKLISEAYDVLSD   59 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~--~~~~~~f~~i~~Ay~~L~d   59 (295)
                      .++|++|||+++||.+|||+|||++|++||||+|+++.  ..|+++|++|++||++|.+
T Consensus        33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN   91 (92)
T ss_dssp             CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence            48999999999999999999999999999999998642  2488899999999999975

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=99.67  E-value=1.2e-17  Score=143.64  Aligned_cols=67  Identities=27%  Similarity=0.488  Sum_probs=60.0

Q ss_pred             CCCccceecCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCc----HHHHHHHHHHHHHhhhcCCccccccccC
Q 022539            2 GVDYYNILKVSRG--ATEDDLKKSYKRLAMKWHPDKNPATN----QQAEAKFKLISEAYDVLSDPRKRQIYDL   68 (295)
Q Consensus         2 ~~d~Y~iLgv~~~--a~~~eIk~ayr~la~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (295)
                      ..|||+||||+++  ++.++||+|||+|+++||||++++..    ..|.++|+.|++||++|+||.+|+.||.
T Consensus        42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~  114 (207)
T 3bvo_A           42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL  114 (207)
T ss_dssp             TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence            4699999999986  79999999999999999999997542    2367899999999999999999999995

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.65  E-value=3.9e-17  Score=116.99  Aligned_cols=57  Identities=25%  Similarity=0.316  Sum_probs=51.6

Q ss_pred             CCccceecCCC-CCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccc
Q 022539            3 VDYYNILKVSR-GATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQ   64 (295)
Q Consensus         3 ~d~Y~iLgv~~-~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~   64 (295)
                      .++|+||||++ +|+.++||+|||+|+++||||++.+     .+.|++|++||++|+++..|.
T Consensus        14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~-----~~~f~~i~~Aye~L~~~~~rk   71 (71)
T 2guz_A           14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS-----PFLATKINEAKDFLEKRGISK   71 (71)
T ss_dssp             HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC-----HHHHHHHHHHHHHHHHHCCCC
T ss_pred             HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-----HHHHHHHHHHHHHHhhhhhcC
Confidence            48999999999 7999999999999999999999753     469999999999999987663

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=99.63  E-value=1.5e-17  Score=169.14  Aligned_cols=76  Identities=39%  Similarity=0.760  Sum_probs=40.9

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS   77 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~   77 (295)
                      +..|||+||||+++||.+|||+|||+||++||||+++.+ +++.++|++|++||++|+||.+|+.||+||++++..+
T Consensus        19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~-~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~   94 (780)
T 3apo_A           19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN   94 (780)
T ss_dssp             ----CHHHHTCCTTCCHHHHHHHHCC------------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence            357999999999999999999999999999999999754 4688999999999999999999999999999888754

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=99.62  E-value=3.8e-17  Score=137.72  Aligned_cols=63  Identities=27%  Similarity=0.554  Sum_probs=58.1

Q ss_pred             CCCcccee------cCCC-CCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccC
Q 022539            2 GVDYYNIL------KVSR-GATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDL   68 (295)
Q Consensus         2 ~~d~Y~iL------gv~~-~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (295)
                      ..|||+||      |+++ +||.++||+|||+|+++||||++++    +.+.|+.|++||++|+||.+|+.||.
T Consensus        10 ~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~----a~~~f~~i~~AY~vL~dp~~R~~Yd~   79 (181)
T 3uo3_A           10 TSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ----GSEQSSTLNQAYHTLKDPLRRSQYML   79 (181)
T ss_dssp             SCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS----CSSGGGSHHHHHHHHHSHHHHHHHHH
T ss_pred             CCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc----HHHHHHHHHHHHHHHcChHHHHHHHH
Confidence            47999999      4765 9999999999999999999999975    46799999999999999999999998

>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}

Probab=99.21  E-value=1.6e-11  Score=94.86  Aligned_cols=75  Identities=17%  Similarity=0.134  Sum_probs=64.6

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFVV  191 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~i  191 (295)
                      +.|.|+.+++.|||.||+.|++++|...      +|       .++|.||+|+++|++++++|+|.+..+ .+|||+|++
T Consensus         9 R~G~DL~~~~~Isl~eAl~G~~i~v~tl------dG-------~~~v~ip~g~~~G~~~rl~G~G~p~~~-~~GDL~v~~   74 (109)
T 3i38_A            9 IVGHNLEIVLPLAPWEAALGAKVTVPTL------KE-------SILLTVPPGSQAGQRLRIKGKGLVSKT-HTGDLFAVI   74 (109)
T ss_dssp             EETTEEEEEEEECHHHHHHCEEEEECCS------SS-------CEEEEECTTCCTTCEEEETTCSCBCSS-CBCCEEEEE
T ss_pred             EECCEEEEEEEcCHHHHhCCCEEEEEcC------CC-------CEEEeeCCCcCcCeEEEECCccCCCCC-CCcCEEEEE
Confidence            4578999999999999999998877764      55       478999999999999999999998744 789999999


Q ss_pred             EEeCCccee
Q 022539          192 EEKPHAVFQ  200 (295)
Q Consensus       192 ~v~~h~~f~  200 (295)
                      +|.-.....
T Consensus        75 ~V~~P~~Ls   83 (109)
T 3i38_A           75 KIVMPTKPD   83 (109)
T ss_dssp             EECCCSSCC
T ss_pred             EEECCCCCC
Confidence            998665443

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=99.09  E-value=5.3e-11  Score=110.72  Aligned_cols=66  Identities=44%  Similarity=0.772  Sum_probs=56.7

Q ss_pred             CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHHHHHHHhhhcCCccccccccC
Q 022539            3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATN--QQAEAKFKLISEAYDVLSDPRKRQIYDL   68 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~--~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (295)
                      .++|.+||+.+.++.++|+++|+++++++|||+.+.+.  ..+.+.|+.|++||++|+|+.+|+.||.
T Consensus       382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~  449 (450)
T 2y4t_A          382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD  449 (450)
T ss_dssp             CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred             hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence            48999999999999999999999999999999997643  4588999999999999999999999996

>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}

Probab=99.08  E-value=1.7e-10  Score=90.76  Aligned_cols=75  Identities=20%  Similarity=0.174  Sum_probs=62.1

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCC--CcCCCeEecCCCCCCCCCC-CCccEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPG--WKKGTKITFPEKGNQEPGL-PPADLI  188 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G--~~~G~~i~~~g~G~~~~~~-~~GDli  188 (295)
                      ++|.|+.+++.|||.||+.|++++|...      +|+      .++|.||+|  +++|++++++|+|.+..+. ..|||+
T Consensus         4 R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG~------~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~   71 (121)
T 1xao_A            4 RDGDDLVYEAEIDLLTAIAGGEFALEHV------SGD------WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLI   71 (121)
T ss_dssp             EETTEEEEEEEEEHHHHHHCEEEEEECT------TSC------EEEEEECTTSCCCTTCEEEETTCSCC------CCCEE
T ss_pred             EECCeEEEEEEcCHHHHhCCCEEEEecC------CCC------EEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEE
Confidence            4578999999999999999998887654      663      689999999  9999999999999986433 689999


Q ss_pred             EEEEEeCCcc
Q 022539          189 FVVEEKPHAV  198 (295)
Q Consensus       189 v~i~v~~h~~  198 (295)
                      |++.+.-+..
T Consensus        72 V~~~V~~P~~   81 (121)
T 1xao_A           72 IKFTIKFPEN   81 (121)
T ss_dssp             EEEEEECCCT
T ss_pred             EEEEEECCCC
Confidence            9999997654

>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}

Probab=98.94  E-value=2.6e-09  Score=89.76  Aligned_cols=75  Identities=15%  Similarity=0.199  Sum_probs=63.3

Q ss_pred             CCceEEEEEecHHHHhcCCEEEEecc-----------CCcEEEEeeCCCCCCCcEEEEcCCCcC-CCCCCCCCCCEEEEE
Q 022539          203 GNDLVVNHKISLLEALTGLSLNLTAL-----------DGRNLTLPVTDIIQPGSEVVIPNEGMP-ISKDPSKKGNLIIKF  270 (295)
Q Consensus       203 g~DL~~~~~I~l~~Al~G~~~~i~~l-----------~g~~i~v~i~~~~~~g~~~rl~g~G~p-~~~~~~~~GDL~v~~  270 (295)
                      |.|+.+++.|||.||+.|++++|...           ..++++|+||+++.+|+++|++|+|-+ ..+  +..|||||.+
T Consensus         3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~g--g~~GDl~v~i   80 (180)
T 2q2g_A            3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPG--TSPGDLVLII   80 (180)
T ss_dssp             -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTT--SCCCEEEEEE
T ss_pred             CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCC--CccccEEEEE
Confidence            78999999999999999998887643           246799999999999999999999987 333  5789999999


Q ss_pred             EEECCCCCC
Q 022539          271 DIMFPSRLT  279 (295)
Q Consensus       271 ~v~~P~~l~  279 (295)
                      ++.-.+.+.
T Consensus        81 ~~~~h~~F~   89 (180)
T 2q2g_A           81 QTKTHPRFT   89 (180)
T ss_dssp             EECCCSSCE
T ss_pred             EEEecccEE
Confidence            998766554

>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A

Probab=98.92  E-value=3.1e-09  Score=88.48  Aligned_cols=75  Identities=13%  Similarity=0.204  Sum_probs=62.9

Q ss_pred             CceEEEEEecHHHHhcCCEEEEecc----CC----cEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECC
Q 022539          204 NDLVVNHKISLLEALTGLSLNLTAL----DG----RNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFP  275 (295)
Q Consensus       204 ~DL~~~~~I~l~~Al~G~~~~i~~l----~g----~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P  275 (295)
                      .|+.+++.|||.||+.|++++|...    .|    ++++|+||+++.+|+++|++|+|-+... .+..|||||++++.-+
T Consensus         1 ~d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~-gg~~GDl~v~i~v~~h   79 (170)
T 1c3g_A            1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQ-TGRRKTLQFVIQEKSH   79 (170)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSS-SSCBCEEEEEEEECCC
T ss_pred             CCEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCCccCCCEEEEeccccCCCC-CCccccEEEEEEEccC
Confidence            3899999999999999999888653    23    6799999999999999999999986443 3578999999999876


Q ss_pred             CCCC
Q 022539          276 SRLT  279 (295)
Q Consensus       276 ~~l~  279 (295)
                      +.+.
T Consensus        80 ~~F~   83 (170)
T 1c3g_A           80 PNFK   83 (170)
T ss_dssp             SSEE
T ss_pred             CccE
Confidence            6543

>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A

Probab=98.89  E-value=5.8e-09  Score=87.70  Aligned_cols=75  Identities=19%  Similarity=0.296  Sum_probs=61.0

Q ss_pred             CCceEEEEEecHHHHhcCCEEEEec------cCC-------cEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEE
Q 022539          203 GNDLVVNHKISLLEALTGLSLNLTA------LDG-------RNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIK  269 (295)
Q Consensus       203 g~DL~~~~~I~l~~Al~G~~~~i~~------l~g-------~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~  269 (295)
                      |.|+.+++.|||.||+.|++++|..      ..|       ++++|+||+++.+|+++|++|+|-+..+  +..|||||.
T Consensus         2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~--g~~GDl~v~   79 (181)
T 3agx_A            2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSN--NIPADIVFV   79 (181)
T ss_dssp             ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSS--SCCCCEEEE
T ss_pred             CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCC--CCcccEEEE
Confidence            5689999999999999999877753      234       5789999999999999999999998664  578999999


Q ss_pred             EEEECCCCCC
Q 022539          270 FDIMFPSRLT  279 (295)
Q Consensus       270 ~~v~~P~~l~  279 (295)
                      +++.-++.+.
T Consensus        80 i~~~~h~~F~   89 (181)
T 3agx_A           80 LKDKPHNIFK   89 (181)
T ss_dssp             EEECCCSSCE
T ss_pred             EEEeccccce
Confidence            9998766554

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=98.86  E-value=1.5e-09  Score=75.56  Aligned_cols=50  Identities=14%  Similarity=0.074  Sum_probs=44.7

Q ss_pred             ccceecCCCC---CCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCC
Q 022539            5 YYNILKVSRG---ATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSD   59 (295)
Q Consensus         5 ~Y~iLgv~~~---a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d   59 (295)
                      =|.||||+++   ++.++|+++||+|....|||+..+     ...+.+|++|++.|..
T Consensus         6 A~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS-----~yl~~ki~~Ake~l~~   58 (65)
T 2guz_B            6 SCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS-----FYLQSKVYRAAERLKW   58 (65)
T ss_dssp             HHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC-----HHHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHHHH
Confidence            4789999999   999999999999999999999854     5778899999999864

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=98.81  E-value=5.7e-09  Score=95.63  Aligned_cols=77  Identities=17%  Similarity=0.253  Sum_probs=62.2

Q ss_pred             ecCCceEEEEEecHHHHhcCCEEEEecc------C-------CcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEE
Q 022539          201 RDGNDLVVNHKISLLEALTGLSLNLTAL------D-------GRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLI  267 (295)
Q Consensus       201 r~g~DL~~~~~I~l~~Al~G~~~~i~~l------~-------g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~  267 (295)
                      +.|.||.+++.|+|.||+.|+++.|...      .       .++++|+||+++++|++||++|+|.|... .+..||||
T Consensus       138 ~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~-gg~~GDL~  216 (329)
T 3lz8_A          138 ARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGEN-GGPNGDLW  216 (329)
T ss_dssp             CCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC----CCCCCEE
T ss_pred             CCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCC-CCCCCcEE
Confidence            4688999999999999999987666543      2       24688999999999999999999998654 35689999


Q ss_pred             EEEEEECCCCC
Q 022539          268 IKFDIMFPSRL  278 (295)
Q Consensus       268 v~~~v~~P~~l  278 (295)
                      |+|+|.-.+.+
T Consensus       217 v~I~v~~h~~F  227 (329)
T 3lz8_A          217 LVIHIAPHPLF  227 (329)
T ss_dssp             EEECCCCCSSC
T ss_pred             EEEEEecCCcc
Confidence            99998876654

>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1

Probab=98.70  E-value=1.3e-08  Score=89.66  Aligned_cols=76  Identities=21%  Similarity=0.199  Sum_probs=64.6

Q ss_pred             CCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCC--CcCCCeEecCCCCCCCCCC-CCccE
Q 022539          111 KPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPG--WKKGTKITFPEKGNQEPGL-PPADL  187 (295)
Q Consensus       111 ~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G--~~~G~~i~~~g~G~~~~~~-~~GDl  187 (295)
                      .+.+.|++++++|||.||+.|++++|...      +|+      .++|.||||  +++|++++++|+|.+..+. ..|||
T Consensus       158 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG~------~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL  225 (248)
T 1nlt_A          158 KRDGDDLVYEAEIDLLTAIAGGEFALEHV------SGD------WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNL  225 (248)
T ss_dssp             EEETTEEEEEEEEEHHHHHHCBCCEEECS------SSC------EEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCE
T ss_pred             eeeCCEEEEEEEeCHHHHhcCCEEEEeCC------CCC------EEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCE
Confidence            35688999999999999999999888765      662      589999999  9999999999999986432 67999


Q ss_pred             EEEEEEeCCcc
Q 022539          188 IFVVEEKPHAV  198 (295)
Q Consensus       188 iv~i~v~~h~~  198 (295)
                      ||+|.|.-+..
T Consensus       226 ~V~~~V~~P~~  236 (248)
T 1nlt_A          226 IIKFTIKDPEN  236 (248)
T ss_dssp             EEEEEEECCC-
T ss_pred             EEEEEEECCCC
Confidence            99999996654

>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.96  E-value=0.0034  Score=47.31  Aligned_cols=30  Identities=13%  Similarity=0.161  Sum_probs=26.7

Q ss_pred             CCCeeeecccCHHHHhcCceeEEEEeEEee
Q 022539          114 PTPIETQLLCTLEELYKGARKKMKISRVLP  143 (295)
Q Consensus       114 ~~di~~~l~itl~e~~~G~~k~i~~~r~~~  143 (295)
                      ++++.+.|.|||+|||+|++++|.+.+.+.
T Consensus         1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~   30 (104)
T 2ctt_A            1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDT   30 (104)
T ss_dssp             CCCCCCCCCCCCSSCCSSSCTTCCSSCCEE
T ss_pred             CCceEEEEEEEHHHHcCCCEEEEEeeeeeE
Confidence            357889999999999999999999988765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	295
d1hdja_	77	a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9	3e-23
d1c3ga2	90	b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Ba	5e-23
d1xbla_	75	a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain	2e-22
d1wjza_	94	a.2.3.1 (A:) CSL-type zinc finger-containing prote	6e-20
d1c3ga1	80	b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Ba	9e-19
d1iura_	88	a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human	2e-18
d1fpoa1	76	a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma	2e-17
d1nlta2	80	b.4.1.1 (A:258-337) Mitochondrial protein import p	3e-17
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	3e-17
d1fafa_	79	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	2e-16
d1gh6a_	114	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	5e-14
d1nlta1	74	b.4.1.1 (A:110-138,A:213-257) Mitochondrial protei	2e-11

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.6 bits (219), Expect = 3e-23
 Identities = 45/77 (58%), Positives = 61/77 (79%), Gaps = 2/77 (2%)

Query: 1  MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDP 60
          MG DYY  L ++RGA+++++K++Y+R A+++HPDKN      AE KFK I+EAYDVLSDP
Sbjct: 1  MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK--EPGAEEKFKEIAEAYDVLSDP 58

Query: 61 RKRQIYDLYGPEGLKAS 77
          RKR+I+D YG EGLK S
Sbjct: 59 RKREIFDRYGEEGLKGS 75

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 90

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 88.5 bits (219), Expect = 5e-23
 Identities = 34/88 (38%), Positives = 51/88 (57%)

Query: 199 FQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISK 258
           F+RDG+DL+    +S  E+L G S  +  +DGR L L     +QP      P +GMP  K
Sbjct: 2   FKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPK 61

Query: 259 DPSKKGNLIIKFDIMFPSRLTAEQKSDL 286
           +PS++GNLI+K+ + +P  L   QK  +
Sbjct: 62  NPSQRGNLIVKYKVDYPISLNDAQKRAI 89

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 86.6 bits (214), Expect = 2e-22
 Identities = 40/72 (55%), Positives = 54/72 (75%), Gaps = 1/72 (1%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          DYY IL VS+ A E +++K+YKRLAMK+HPD+N   +++AEAKFK I EAY+VL+D +KR
Sbjct: 4  DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQG-DKEAEAKFKEIKEAYEVLTDSQKR 62

Query: 64 QIYDLYGPEGLK 75
            YD YG    +
Sbjct: 63 AAYDQYGHAAFE 74

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 80.5 bits (198), Expect = 6e-20
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 5/75 (6%)

Query: 1  MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPA-----TNQQAEAKFKLISEAYD 55
          +  D+Y+IL     A   DLK+ Y++L + +HPDK  A     T ++   KF  I +A+ 
Sbjct: 14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWK 73

Query: 56 VLSDPRKRQIYDLYG 70
          +L +   ++ YDL  
Sbjct: 74 ILGNEETKKKYDLQR 88

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 76.9 bits (189), Expect = 9e-19
 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 5/82 (6%)

Query: 116 PIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEK 175
            ++  L  +LE+L+ G +K  KI R  P    +    +  + I +KPGWK GTKIT+  +
Sbjct: 2   TVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASE----KTQIDIQLKPGWKAGTKITYKNQ 57

Query: 176 GNQEP-GLPPADLIFVVEEKPH 196
           G+  P       L FV++EK H
Sbjct: 58  GDYNPQTGRRKTLQFVIQEKSH 79

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (187), Expect = 2e-18
 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 3/72 (4%)

Query: 4  DYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKR 63
          +  ++++ +    E + KK  +RL +KWHPDKNP  +  A   FK +    + L    K+
Sbjct: 17 EVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLE---KQ 73

Query: 64 QIYDLYGPEGLK 75
             D       +
Sbjct: 74 AFLDQNADRASR 85

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 73.1 bits (179), Expect = 2e-17
 Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 6/71 (8%)

Query: 4  DYYNILKVSRGATED--DLKKSYKRLAMKWHPDKNP----ATNQQAEAKFKLISEAYDVL 57
          DY+ +  +      D   L   ++ L  ++HPDK      A    A  +   I++A+  L
Sbjct: 2  DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 58 SDPRKRQIYDL 68
            P  R  Y L
Sbjct: 62 RHPLMRAEYLL 72

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 80

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 73.0 bits (179), Expect = 3e-17
 Identities = 34/79 (43%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 199 FQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNL--TLPVTDIIQPGSEVVIPNEGMPI 256
           F+RDG+DLV   +I LL A+ G    L  + G  L   +   ++I PG   VI  +GMPI
Sbjct: 2   FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 61

Query: 257 SKDPSKKGNLIIKFDIMFP 275
            K     GNLIIKF I  P
Sbjct: 62  PKYG-GYGNLIIKFTIKDP 79

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 73.1 bits (179), Expect = 3e-17
 Identities = 12/67 (17%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 2  GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQA--EAKFKLISEAYDVLSD 59
          G   +  + ++   T + +KK Y++  +  HPDK      +   +  F  +++A+    +
Sbjct: 32 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFEN 91

Query: 60 PRKRQIY 66
            ++ +Y
Sbjct: 92 QGQKPLY 98

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

 Score = 70.4 bits (172), Expect = 2e-16
 Identities = 11/69 (15%), Positives = 26/69 (37%), Gaps = 7/69 (10%)

Query: 4  DYYNILKVSRGA--TEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPR 61
              +LK+ R        ++++YK+ ++  HPDK  +         + ++  +       
Sbjct: 12 RLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHAL-----MQELNSLWGTFKTEV 66

Query: 62 KRQIYDLYG 70
               +L G
Sbjct: 67 YNLRMNLGG 75

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

 Score = 64.8 bits (157), Expect = 5e-14
 Identities = 14/72 (19%), Positives = 28/72 (38%), Gaps = 7/72 (9%)

Query: 4  DYYNILKVSRGA--TEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPR 61
             ++L + R A      ++K+Y +   ++HPDK     +      K ++  Y  + D  
Sbjct: 9  QLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEK-----MKKMNTLYKKMEDGV 63

Query: 62 KRQIYDLYGPEG 73
          K      +G   
Sbjct: 64 KYAHQPDFGGFW 75

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 74

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.6 bits (136), Expect = 2e-11
 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 13/81 (16%)

Query: 116 PIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEK 175
            I+ ++  +LEELYK                 K    ++IL++ ++PG K G +I F  +
Sbjct: 6   DIKHEISASLEELYK-------------GRTAKLALNRKILEVHVEPGMKDGQRIVFKGE 52

Query: 176 GNQEPGLPPADLIFVVEEKPH 196
            +Q P + P D++F+V E+PH
Sbjct: 53  ADQAPDVIPGDVVFIVSERPH 73

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	295
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.94
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	99.92
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	99.91
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	99.88
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	99.85
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	99.82
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.79
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.79
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	99.74
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	99.74
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	99.72
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.68
d1nlta1	74	Mitochondrial protein import protein mas5 (Hsp40,	99.51
d1c3ga2	90	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.1
d1c3ga1	80	Heat shock protein 40 Sis1 {Baker's yeast (Sacchar	99.05
d1nlta2	80	Mitochondrial protein import protein mas5 (Hsp40,	98.97

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=1.3e-27  Score=178.05  Aligned_cols=90  Identities=38%  Similarity=0.725  Sum_probs=86.0

Q ss_pred             ceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECCCC
Q 022539          198 VFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFPSR  277 (295)
Q Consensus       198 ~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P~~  277 (295)
                      .|+|+|+||+++++||+.||++|++++|+|+||+++.|++|+++++|++++|+|+|||...+++.+|||||+|+|.+|++
T Consensus         1 ~F~R~G~DL~~~~~I~~~eal~G~~~~i~~~dG~~i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~V~~~v~~P~~   80 (90)
T d1c3ga2           1 NFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPIS   80 (90)
T ss_dssp             SEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSS
T ss_pred             CCeEeCCeEEEEEEeCHHHHhcCCeEEEecccccceecccccccccccccccCCCCCCcCCCCCCcCCEEEEEEEEcCCC
Confidence            49999999999999999999999999999999999999999999999999999999998876678999999999999999


Q ss_pred             CCHHHHHHHH
Q 022539          278 LTAEQKSDLK  287 (295)
Q Consensus       278 l~~~~~~~l~  287 (295)
                      ||++|+++|+
T Consensus        81 ls~~qk~~lE   90 (90)
T d1c3ga2          81 LNDAQKRAID   90 (90)
T ss_dssp             CCTTHHHHTC
T ss_pred             CCHHHHHhhC
Confidence            9999999874

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3e-26  Score=165.61  Aligned_cols=75  Identities=60%  Similarity=1.065  Sum_probs=70.5

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCCcc
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLKAS   77 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~   77 (295)
                      |++|||+||||+++||.++|++||+++++++|||+++..  ++.+.|+.|++||+||+||.+|+.||+||++++++.
T Consensus         1 m~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~~--~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~~~~g~   75 (77)
T d1hdja_           1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEP--GAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGS   75 (77)
T ss_dssp             CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCT--THHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCSS
T ss_pred             CCCChHHHcCCCCCcCHHHHHHHHHHHHHHhccccccch--hHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcCC
Confidence            999999999999999999999999999999999999763  578899999999999999999999999999988653

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=9.5e-26  Score=161.99  Aligned_cols=73  Identities=55%  Similarity=0.925  Sum_probs=67.9

Q ss_pred             CCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCCC
Q 022539            2 GVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGLK   75 (295)
Q Consensus         2 ~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~   75 (295)
                      .+|||+||||+++||.+|||+|||+++++||||+++.+ +.+.+.|..|++||+||+||.+|+.||+||+.++.
T Consensus         2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~-~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~e   74 (75)
T d1xbla_           2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD-KEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE   74 (75)
T ss_dssp             CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTT-CHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSSCC
T ss_pred             CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCC-hHHHHHHHHHHHHHHhcCCHHHHHHHHHhCccccC
Confidence            47999999999999999999999999999999999864 46788999999999999999999999999988764

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=8.2e-23  Score=148.48  Aligned_cols=78  Identities=44%  Similarity=0.655  Sum_probs=72.9

Q ss_pred             ceeecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCC--CCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEECC
Q 022539          198 VFQRDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDI--IQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMFP  275 (295)
Q Consensus       198 ~f~r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~--~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~P  275 (295)
                      .|+|+|+||+++++||+.||++|++++|+|+||+.++++++++  +++|+++||+|+|||..+ .+.+|||||+|+|.+|
T Consensus         1 tF~R~G~dL~~~~~I~~~eal~G~~~~i~~~dg~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~-~~~~GDL~v~~~V~~P   79 (80)
T d1nlta2           1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPK-YGGYGNLIIKFTIKDP   79 (80)
T ss_dssp             SCEEETTEEEEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSS-SCSBCCEEEEEEEECC
T ss_pred             CcEEeCCEEEEEEEeCHHHHhCCCEEEEEecCcceEEEEeCCCCCcCCCCEEEecCCCCCCCC-cCCcCcEEEEEEEEcC
Confidence            4999999999999999999999999999999999899888765  999999999999999887 4679999999999999


Q ss_pred             C
Q 022539          276 S  276 (295)
Q Consensus       276 ~  276 (295)
                      +
T Consensus        80 k   80 (80)
T d1nlta2          80 E   80 (80)
T ss_dssp             C
T ss_pred             C
Confidence            6

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=1.3e-22  Score=151.69  Aligned_cols=70  Identities=33%  Similarity=0.610  Sum_probs=63.7

Q ss_pred             CCCCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHHHHHHHHhhhcCCccccccccCCC
Q 022539            1 MGVDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATN-----QQAEAKFKLISEAYDVLSDPRKRQIYDLYG   70 (295)
Q Consensus         1 m~~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~-----~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g   70 (295)
                      |.+|||+||||+++|+.+|||+||++|+++||||+++...     ..+.+.|+.|++||++|+||.+|+.||...
T Consensus        14 ~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~~   88 (94)
T d1wjza_          14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR   88 (94)
T ss_dssp             SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred             hccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHcc
Confidence            5689999999999999999999999999999999987542     457889999999999999999999999754

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=99.82  E-value=2.3e-22  Score=155.73  Aligned_cols=67  Identities=24%  Similarity=0.330  Sum_probs=61.3

Q ss_pred             CCccceecCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCCCC
Q 022539            3 VDYYNILKVSRGA--TEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPEGL   74 (295)
Q Consensus         3 ~d~Y~iLgv~~~a--~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~   74 (295)
                      .|||+||||+++|  +.++||+|||+||++||||++++     .++|++|++||+||+|+.+|+.||.+|....
T Consensus         8 ~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~-----~e~F~~I~~AY~vLsd~~kR~~YD~~~~~~~   76 (114)
T d1gh6a_           8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGVKYAHQPDFGGFWD   76 (114)
T ss_dssp             HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-----TTTTHHHHHHHHHHHHHHHSCCSSCCSCCCC
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhh-----HHHHHHHHHHHHHhCCHHHHHHHhccCCCCc
Confidence            5899999999999  78899999999999999999986     3689999999999999999999999887543

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.79  E-value=1.9e-19  Score=128.43  Aligned_cols=74  Identities=36%  Similarity=0.766  Sum_probs=69.2

Q ss_pred             CCCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCCCCCccEEEE
Q 022539          111 KPTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPGLPPADLIFV  190 (295)
Q Consensus       111 ~~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~GDliv~  190 (295)
                      ++++.|++++|+|||+|||+|+++++.+.+             +.++|+||||+++|++|+|+|+|++.+++.+|||+|+
T Consensus         1 Prkg~di~~~l~isleea~~G~~~~~~~~~-------------~~~~i~Ip~G~~~G~~ir~~g~G~~~~~~~~GDl~v~   67 (74)
T d1nlta1           1 PQRGKDIKHEISASLEELYKGRTAKLALNR-------------KILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFI   67 (74)
T ss_dssp             CCBCCCEEEEEEECTTHHHHCEEEEEEEEE-------------EEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEE
T ss_pred             CCCCCCEEEEEEecHHHHHhhcccceeecC-------------ccEEEEecccccCCeEEEecCCcCCCCCCCCCCEEEE
Confidence            467899999999999999999999998863             5799999999999999999999999999899999999


Q ss_pred             EEEeCCc
Q 022539          191 VEEKPHA  197 (295)
Q Consensus       191 i~v~~h~  197 (295)
                      |+++||.
T Consensus        68 i~~~pHk   74 (74)
T d1nlta1          68 VSERPHK   74 (74)
T ss_dssp             EEECCCS
T ss_pred             EEecCCC
Confidence            9999995

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.79  E-value=1.5e-19  Score=131.00  Aligned_cols=78  Identities=37%  Similarity=0.678  Sum_probs=70.9

Q ss_pred             CeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCCC-CCCccEEEEEEEe
Q 022539          116 PIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEPG-LPPADLIFVVEEK  194 (295)
Q Consensus       116 di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~-~~~GDliv~i~v~  194 (295)
                      +++++|+|||+|+|+|+++++.+.|..+++.+    +.++++|.||||+++|++|+|+|+|++.++ +.+|||+|+|+++
T Consensus         2 ~v~~~l~vtLee~~~G~~k~i~~~r~~~~g~~----~~~~~~v~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~~~i~~~   77 (80)
T d1c3ga1           2 TVQVNLPVSLEDLFVGKKKSFKIGRKGPHGAS----EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEK   77 (80)
T ss_dssp             EEEEEEEECHHHHHHTCEEEEEEEEEETTTEE----EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEEC
T ss_pred             CEEEEeEEEHHHHhCCCceEeecceecccCCC----ceEEEEEEECCCCCCCcEEEECCccccCcCCCCCCCEEEEEEeC
Confidence            68899999999999999999999998876544    467899999999999999999999999764 5789999999999


Q ss_pred             CCc
Q 022539          195 PHA  197 (295)
Q Consensus       195 ~h~  197 (295)
                      |||
T Consensus        78 ~HP   80 (80)
T d1c3ga1          78 SHP   80 (80)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            998

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=99.74  E-value=1.9e-19  Score=129.33  Aligned_cols=63  Identities=19%  Similarity=0.318  Sum_probs=57.9

Q ss_pred             CCccceecCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCC
Q 022539            3 VDYYNILKVSRGA--TEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYG   70 (295)
Q Consensus         3 ~d~Y~iLgv~~~a--~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g   70 (295)
                      .+||+||||++++  +.++||+|||+++++||||++.+     .++|++|++||++|+|+.+|..||.-+
T Consensus        11 ~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~-----~e~~~~in~Ay~~L~d~~~r~~~~~~~   75 (79)
T d1fafa_          11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS-----HALMQELNSLWGTFKTEVYNLRMNLGG   75 (79)
T ss_dssp             HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC-----HHHHHHHHHHHHHHHHHHHHHTTCCSS
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCCC-----HHHHHHHHHHHHHHCCHHHHHHHccCC
Confidence            4799999999988  99999999999999999999864     478999999999999999999999743

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=3.3e-19  Score=130.79  Aligned_cols=67  Identities=28%  Similarity=0.485  Sum_probs=60.3

Q ss_pred             CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHhhhcCCccccccccCCCCC
Q 022539            3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATNQQAEAKFKLISEAYDVLSDPRKRQIYDLYGPE   72 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~   72 (295)
                      +|+|+||+|+.+||.+|||+|||+|+++||||+|+++...|.+.|+.|++||++|+   +++.||++...
T Consensus        16 ~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~---~~~~~d~~~~~   82 (88)
T d1iura_          16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLE---KQAFLDQNADR   82 (88)
T ss_dssp             HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHH---HHTTCSSSSSC
T ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHH---HHHHhhccchH
Confidence            68999999999999999999999999999999999876679999999999999996   46777775543

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=6.2e-19  Score=126.39  Aligned_cols=66  Identities=24%  Similarity=0.430  Sum_probs=57.7

Q ss_pred             CCccceecCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCc----HHHHHHHHHHHHHhhhcCCccccccccC
Q 022539            3 VDYYNILKVSRGA--TEDDLKKSYKRLAMKWHPDKNPATN----QQAEAKFKLISEAYDVLSDPRKRQIYDL   68 (295)
Q Consensus         3 ~d~Y~iLgv~~~a--~~~eIk~ayr~la~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yd~   68 (295)
                      .|||++|||++++  +.+|||+|||+++++||||+.....    ..+.+.|+.|++||+||+||.+|+.|+.
T Consensus         1 lnyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll   72 (76)
T d1fpoa1           1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLL   72 (76)
T ss_dssp             CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred             CChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence            3899999999954  5899999999999999999976432    2477889999999999999999999974

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.68  E-value=5e-18  Score=127.18  Aligned_cols=64  Identities=20%  Similarity=0.393  Sum_probs=58.5

Q ss_pred             CCccceecCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc--HHHHHHHHHHHHHhhhcCCccccccc
Q 022539            3 VDYYNILKVSRGATEDDLKKSYKRLAMKWHPDKNPATN--QQAEAKFKLISEAYDVLSDPRKRQIY   66 (295)
Q Consensus         3 ~d~Y~iLgv~~~a~~~eIk~ayr~la~~~hPd~~~~~~--~~~~~~f~~i~~Ay~~L~d~~~r~~y   66 (295)
                      .++|++||++..||.++||+|||+++++||||+++++.  ..|.+.|+.|++||++|+||.+|+.|
T Consensus        33 ~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y   98 (98)
T d1nz6a_          33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY   98 (98)
T ss_dssp             CCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred             ccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence            47899999999999999999999999999999987542  34788999999999999999999988

>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.51  E-value=2.6e-14  Score=101.31  Aligned_cols=71  Identities=18%  Similarity=0.211  Sum_probs=64.2

Q ss_pred             ecCCceEEEEEecHHHHhcCCEEEEeccCCcEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEEC
Q 022539          201 RDGNDLVVNHKISLLEALTGLSLNLTALDGRNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMF  274 (295)
Q Consensus       201 r~g~DL~~~~~I~l~~Al~G~~~~i~~l~g~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~  274 (295)
                      |+|.|++++++|||.||++|+++.|.+.. ++++|+||+++++|+++|++|+|.+..+  +.+|||+|++++.-
T Consensus         2 rkg~di~~~l~isleea~~G~~~~~~~~~-~~~~i~Ip~G~~~G~~ir~~g~G~~~~~--~~~GDl~v~i~~~p   72 (74)
T d1nlta1           2 QRGKDIKHEISASLEELYKGRTAKLALNR-KILEVHVEPGMKDGQRIVFKGEADQAPD--VIPGDVVFIVSERP   72 (74)
T ss_dssp             CBCCCEEEEEEECTTHHHHCEEEEEEEEE-EEEEEEECTTCCTTCEEEETTCSCCCTT--CBCCCEEEEEEECC
T ss_pred             CCCCCEEEEEEecHHHHHhhcccceeecC-ccEEEEecccccCCeEEEecCCcCCCCC--CCCCCEEEEEEecC
Confidence            67999999999999999999999998754 4799999999999999999999998765  56899999999753

>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.10  E-value=5.3e-11  Score=87.04  Aligned_cols=77  Identities=16%  Similarity=0.155  Sum_probs=65.0

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCCCcCCCeEecCCCCCCCC--CCCCccEEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPGWKKGTKITFPEKGNQEP--GLPPADLIF  189 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~--~~~~GDliv  189 (295)
                      |+|.|+.++++|||.||+.|+++++...      +|      +.++|.||+|+++|++++++|+|.+..  .+..|||+|
T Consensus         4 R~G~DL~~~~~I~~~eal~G~~~~i~~~------dG------~~i~i~ip~~~~~g~~~~i~g~G~p~~~~~~~rGdL~V   71 (90)
T d1c3ga2           4 RDGDDLIYTLPLSFKESLLGFSKTIQTI------DG------RTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIV   71 (90)
T ss_dssp             EETTEEEEEECCBHHHHHHCEEEEEECS------SS------CEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEE
T ss_pred             EeCCeEEEEEEeCHHHHhcCCeEEEecc------cc------cceecccccccccccccccCCCCCCcCCCCCCcCCEEE
Confidence            4678999999999999999999988754      56      378999999999999999999998753  345799999


Q ss_pred             EEEEeCCccee
Q 022539          190 VVEEKPHAVFQ  200 (295)
Q Consensus       190 ~i~v~~h~~f~  200 (295)
                      ++.+.-...+.
T Consensus        72 ~~~v~~P~~ls   82 (90)
T d1c3ga2          72 KYKVDYPISLN   82 (90)
T ss_dssp             EECCBCCSSCC
T ss_pred             EEEEEcCCCCC
Confidence            99998554443

>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Heat shock protein 40 Sis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.05  E-value=3.2e-10  Score=80.88  Aligned_cols=70  Identities=14%  Similarity=0.220  Sum_probs=58.4

Q ss_pred             CceEEEEEecHHHHhcCCEEEEec----cCC----cEEEEeeCCCCCCCcEEEEcCCCcCCCCCCCCCCCEEEEEEEEC
Q 022539          204 NDLVVNHKISLLEALTGLSLNLTA----LDG----RNLTLPVTDIIQPGSEVVIPNEGMPISKDPSKKGNLIIKFDIMF  274 (295)
Q Consensus       204 ~DL~~~~~I~l~~Al~G~~~~i~~----l~g----~~i~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GDL~v~~~v~~  274 (295)
                      +|+...+.|||.||+.|++..|..    .+|    +++.|.||+++.+|++++++|+|..... .+..|||+|.+++.-
T Consensus         1 e~v~~~l~vtLee~~~G~~k~i~~~r~~~~g~~~~~~~~v~Ip~G~~~G~~i~~~g~G~~~~~-~~~~GDl~~~i~~~~   78 (80)
T d1c3ga1           1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQ-TGRRKTLQFVIQEKS   78 (80)
T ss_dssp             CEEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSS-SSCBCEEEEEEEECC
T ss_pred             CCEEEEeEEEHHHHhCCCceEeecceecccCCCceEEEEEEECCCCCCCcEEEECCccccCcC-CCCCCCEEEEEEeCC
Confidence            478999999999999999766643    344    3689999999999999999999998655 246899999998763

>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: HSP40/DnaJ peptide-binding domain
superfamily: HSP40/DnaJ peptide-binding domain
family: HSP40/DnaJ peptide-binding domain
domain: Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.97  E-value=2.9e-10  Score=81.17  Aligned_cols=71  Identities=21%  Similarity=0.193  Sum_probs=61.0

Q ss_pred             CCCCCeeeecccCHHHHhcCceeEEEEeEEeeCCCCcEEEEEEEEEEEeCCC--CcCCCeEecCCCCCCCC-CCCCccEE
Q 022539          112 PTPTPIETQLLCTLEELYKGARKKMKISRVLPDHFGKPITVQEILKIDIKPG--WKKGTKITFPEKGNQEP-GLPPADLI  188 (295)
Q Consensus       112 ~~~~di~~~l~itl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~l~V~Ip~G--~~~G~~i~~~g~G~~~~-~~~~GDli  188 (295)
                      +++.|+.++++|||.||+.|+++++...      +|      ..++|.||++  +++|++++++|+|.+.. ++..|||+
T Consensus         4 R~G~dL~~~~~I~~~eal~G~~~~i~~~------dg------~~~~i~i~~~~~~~~g~~~~i~g~G~p~~~~~~~GDL~   71 (80)
T d1nlta2           4 RDGDDLVYEAEIDLLTAIAGGEFALEHV------SG------DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLI   71 (80)
T ss_dssp             EETTEEEEEEEEEHHHHHHCBCCEEECS------SS------CEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEE
T ss_pred             EeCCEEEEEEEeCHHHHhCCCEEEEEec------Cc------ceEEEEeCCCCCcCCCCEEEecCCCCCCCCcCCcCcEE
Confidence            4578999999999999999999988764      55      3678888877  99999999999999764 45689999


Q ss_pred             EEEEEe
Q 022539          189 FVVEEK  194 (295)
Q Consensus       189 v~i~v~  194 (295)
                      |++++.
T Consensus        72 v~~~V~   77 (80)
T d1nlta2          72 IKFTIK   77 (80)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            999987