Citrus Sinensis ID: 022541


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-----
MCVYELIWGMQVLDDLDAVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVLKRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPDRFESRKPLPAQWRGLRDDELSKEAGIPGCVFVHMSGFIGGNQSYGGALAMARAALKL
ccEEEEEccccccccccEEEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHHHHcccccEEEEEEEccccccEEEEEEEcccccccccccccccccccccHHHHHHHcccccEEEcccccEEEcccHHHHHHHHHHHHcc
ccHHHHHHHHHHHHcccEEEEccccEcccccccccccccccccccccccEEEcHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHHHccccccEEEEEEEccccccEEEEEEEcccccccccccccHHHccccHHHHHHHcccccEEEEEccccccccccHHHHHHHHHHHHcc
MCVYELIWGMQVLDDLDAVLDvggvydpsndcydhhqkGFEEvfghgfstklssAGLVYKHFGKELIAKelnvdeghpdVHRLFLAVYKNFMEAIDAIDnginqydtdkppryvnntnlssrvgklnldwtepdqsaERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAerydydpsgeimvlkrfcpwklhLFELEEEMKIEPLIKYVLYeddrgkqwRVQAVAvspdrfesrkplpaqwrglrddelskeagipgcVFVHmsgfiggnqsYGGALAMARAALKL
MCVYELIWGMQVLDDLDAVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKElnvdeghpDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNtnlssrvgklnlDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVLKRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAvavspdrfesrkplpaqwrglRDDELSKEAGIPGCVFVHMSGFIGGNQSYGGALAMARAALKL
MCVYELIWGMQvlddldavldvggvYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVLKRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPDRFESRKPLPAQWRGLRDDELSKEAGIPGCVFVHMSGFIGGNQSYGGALAMARAALKL
*CVYELIWGMQVLDDLDAVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTD****YV**********************************DLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVLKRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVS*************W********SKEAGIPGCVFVHMSGFIGGNQSYGGALA********
MCVYELIWGMQVLDDLDAVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVLKRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPDRFESRKPLPAQWRGLRDDELSKEAGIPGCVFVHMSGFIGGNQSYGGALAMARAALKL
MCVYELIWGMQVLDDLDAVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWT***********AFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVLKRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPDRFESRKPLPAQWRGLRDDELSKEAGIPGCVFVHMSGFIGGNQSYGGALAMARAALKL
MCVYELIWGMQVLDDLDAVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVLKRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPDRFESRKPLPAQWRGLRDDELSKEAGIPGCVFVHMSGFIGGNQSYGGALAMARAALKL
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MCVYELIWGMQVLDDLDAVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVLKRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPDRFESRKPLPAQWRGLRDDELSKEAGIPGCVFVHMSGFIGGNQSYGGALAMARAALKL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query295 2.2.26 [Sep-21-2011]
Q9JK81380 UPF0160 protein MYG1, mit yes no 0.935 0.726 0.494 1e-73
Q641W2381 UPF0160 protein MYG1, mit yes no 0.922 0.713 0.501 4e-73
Q9HB07376 UPF0160 protein MYG1, mit yes no 0.935 0.734 0.494 5e-73
Q58DG1381 UPF0160 protein MYG1, mit yes no 0.935 0.724 0.491 2e-72
O17606340 UPF0160 protein C27H6.8 O yes no 0.942 0.817 0.475 4e-71
Q55G91329 UPF0160 protein OS=Dictyo yes no 0.942 0.844 0.460 4e-70
Q9P7T6324 UPF0160 protein C694.04c yes no 0.928 0.845 0.454 6e-66
P40093338 UPF0160 protein YER156C O yes no 0.928 0.810 0.432 1e-62
Q9Z862290 UPF0160 protein CPn_0489/ yes no 0.755 0.768 0.261 2e-08
Q9PK08289 UPF0160 protein TC_0665 O yes no 0.742 0.757 0.232 1e-05
>sp|Q9JK81|MYG1_MOUSE UPF0160 protein MYG1, mitochondrial OS=Mus musculus GN=Myg1 PE=2 SV=1 Back     alignment and function desciption
 Score =  276 bits (706), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 142/287 (49%), Positives = 186/287 (64%), Gaps = 11/287 (3%)

Query: 13  LDDLDAVLDVGGVYDPSNDCYDHHQKGFEEVF-----GHGFSTKLSSAGLVYKHFGKELI 67
           L   D V+DVGG Y+P +  YDHHQ+ F E       G  + TKLSSAGLVY HFG++L+
Sbjct: 84  LASCDIVVDVGGEYNPQSHRYDHHQRTFTETMSSLCPGKPWQTKLSSAGLVYLHFGRKLL 143

Query: 68  AKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLN 127
           A+ L   E    V  ++  +Y+NF+E +DA+DNGI+Q+  +  PRY   T LS+RV +LN
Sbjct: 144 AQLLGTSEEDSVVDTIYDKMYENFVEEVDAVDNGISQW-AEGEPRYAMTTTLSARVARLN 202

Query: 128 LDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSG 187
             W +P+Q  E     F++ MDL  +EFL  + FY  SWLPAR++V E +A+R+  D SG
Sbjct: 203 PTWNQPNQDTE---AGFRRAMDLVQEEFLQRLNFYQHSWLPARALVEEALAQRFKVDSSG 259

Query: 188 EIMVL-KRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPDRFESRKPL 246
           EI+ L K  CPWK HL+ LE E+  +  I +V+Y D  G QWRVQ V   P  F+SR PL
Sbjct: 260 EIVELAKGGCPWKEHLYHLESELSPKVAITFVIYTDQAG-QWRVQCVPKEPHSFQSRLPL 318

Query: 247 PAQWRGLRDDELSKEAGIPGCVFVHMSGFIGGNQSYGGALAMARAAL 293
           P  WRGLRD  L + +GIPGC+FVH SGFIGG+ +  GAL MARA L
Sbjct: 319 PEPWRGLRDKALDQVSGIPGCIFVHASGFIGGHHTREGALNMARATL 365





Mus musculus (taxid: 10090)
>sp|Q641W2|MYG1_RAT UPF0160 protein MYG1, mitochondrial OS=Rattus norvegicus GN=Myg1 PE=1 SV=1 Back     alignment and function description
>sp|Q9HB07|MYG1_HUMAN UPF0160 protein MYG1, mitochondrial OS=Homo sapiens GN=C12orf10 PE=1 SV=2 Back     alignment and function description
>sp|Q58DG1|MYG1_BOVIN UPF0160 protein MYG1, mitochondrial OS=Bos taurus PE=2 SV=1 Back     alignment and function description
>sp|O17606|YK4P_CAEEL UPF0160 protein C27H6.8 OS=Caenorhabditis elegans GN=C27H6.8 PE=3 SV=2 Back     alignment and function description
>sp|Q55G91|U160_DICDI UPF0160 protein OS=Dictyostelium discoideum GN=DDB_G0267768 PE=3 SV=1 Back     alignment and function description
>sp|Q9P7T6|YIW4_SCHPO UPF0160 protein C694.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC694.04c PE=3 SV=1 Back     alignment and function description
>sp|P40093|YEY6_YEAST UPF0160 protein YER156C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YER156C PE=1 SV=1 Back     alignment and function description
>sp|Q9Z862|Y489_CHLPN UPF0160 protein CPn_0489/CP_0265/CPj0489/CpB0509 OS=Chlamydia pneumoniae GN=CPn_0489 PE=3 SV=2 Back     alignment and function description
>sp|Q9PK08|Y665_CHLMU UPF0160 protein TC_0665 OS=Chlamydia muridarum (strain MoPn / Nigg) GN=TC_0665 PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query295
255555723373 Protein MYG1, putative [Ricinus communis 0.969 0.766 0.814 1e-141
225426621361 PREDICTED: UPF0160 protein MYG1, mitocho 0.966 0.789 0.824 1e-140
297742425338 unnamed protein product [Vitis vinifera] 0.966 0.843 0.824 1e-139
449452196345 PREDICTED: UPF0160 protein-like [Cucumis 0.966 0.826 0.821 1e-139
297805440372 hypothetical protein ARALYDRAFT_330340 [ 0.966 0.766 0.803 1e-139
79527307373 Metal-dependent protein hydrolase [Arabi 0.966 0.764 0.796 1e-137
9757942346 GAMM1 protein-like [Arabidopsis thaliana 0.966 0.823 0.796 1e-137
15146292346 AT5g41970/MJC20_7 [Arabidopsis thaliana] 0.966 0.823 0.792 1e-137
356504252369 PREDICTED: UPF0160 protein MYG1, mitocho 0.966 0.772 0.785 1e-134
224075220345 predicted protein [Populus trichocarpa] 0.922 0.788 0.830 1e-134
>gi|255555723|ref|XP_002518897.1| Protein MYG1, putative [Ricinus communis] gi|223541884|gb|EEF43430.1| Protein MYG1, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  505 bits (1301), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 233/286 (81%), Positives = 262/286 (91%)

Query: 10  MQVLDDLDAVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAK 69
           +QVL+ LDAVLDVGGVYDP +D YDHHQKGFEEVFGHGF+TKLSSAGLVYKHFGKE+IAK
Sbjct: 88  LQVLESLDAVLDVGGVYDPVHDRYDHHQKGFEEVFGHGFTTKLSSAGLVYKHFGKEIIAK 147

Query: 70  ELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLD 129
           EL +DEGHP+VHRLFLA+YK+FMEAIDA+DNGINQYDTDKPPRYVNNT+LSSRVG+LNLD
Sbjct: 148 ELQLDEGHPNVHRLFLAIYKSFMEAIDAVDNGINQYDTDKPPRYVNNTHLSSRVGRLNLD 207

Query: 130 WTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEI 189
           W EPDQS E+ENE FQ+ M LAG EFLD++ ++ +SWLPARSIV+EC+  R D DPSGEI
Sbjct: 208 WIEPDQSPEKENEVFQRAMTLAGSEFLDSLHYHAKSWLPARSIVMECLEARSDVDPSGEI 267

Query: 190 MVLKRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPDRFESRKPLPAQ 249
           MVL  FCPWKLHLFE+EEE+KIEP IKYVLY+DDR K WRVQAVAV+PDRFESR+ LPAQ
Sbjct: 268 MVLATFCPWKLHLFEIEEELKIEPSIKYVLYQDDRSKHWRVQAVAVAPDRFESRRALPAQ 327

Query: 250 WRGLRDDELSKEAGIPGCVFVHMSGFIGGNQSYGGALAMARAALKL 295
           WRGLRDDELS+E+GIP CVFVHMSGFIGGN+SY GALAMARAALKL
Sbjct: 328 WRGLRDDELSRESGIPACVFVHMSGFIGGNKSYEGALAMARAALKL 373




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426621|ref|XP_002280827.1| PREDICTED: UPF0160 protein MYG1, mitochondrial-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297742425|emb|CBI34574.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449452196|ref|XP_004143846.1| PREDICTED: UPF0160 protein-like [Cucumis sativus] gi|449509379|ref|XP_004163571.1| PREDICTED: UPF0160 protein-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297805440|ref|XP_002870604.1| hypothetical protein ARALYDRAFT_330340 [Arabidopsis lyrata subsp. lyrata] gi|297316440|gb|EFH46863.1| hypothetical protein ARALYDRAFT_330340 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|79527307|ref|NP_199012.2| Metal-dependent protein hydrolase [Arabidopsis thaliana] gi|332007365|gb|AED94748.1| Metal-dependent protein hydrolase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|9757942|dbj|BAB08430.1| GAMM1 protein-like [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15146292|gb|AAK83629.1| AT5g41970/MJC20_7 [Arabidopsis thaliana] gi|19699166|gb|AAL90949.1| AT5g41970/MJC20_7 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356504252|ref|XP_003520911.1| PREDICTED: UPF0160 protein MYG1, mitochondrial-like [Glycine max] Back     alignment and taxonomy information
>gi|224075220|ref|XP_002304577.1| predicted protein [Populus trichocarpa] gi|222842009|gb|EEE79556.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query295
TAIR|locus:2165760373 AT5G41970 "AT5G41970" [Arabido 0.915 0.723 0.8 6.5e-122
TAIR|locus:2082981354 AT3G49320 "AT3G49320" [Arabido 0.908 0.757 0.712 1.5e-108
UNIPROTKB|Q9HB07376 C12orf10 "UPF0160 protein MYG1 0.891 0.699 0.492 3.6e-66
RGD|1359237381 Myg1 "melanocyte proliferating 0.891 0.690 0.496 3.6e-66
MGI|MGI:1929864380 Myg1 "melanocyte proliferating 0.891 0.692 0.492 4.5e-66
UNIPROTKB|Q58DG1381 Q58DG1 "UPF0160 protein MYG1, 0.891 0.690 0.489 1.2e-65
DICTYBASE|DDB_G0267768329 DDB_G0267768 "metal-dependent 0.857 0.768 0.478 4.7e-64
CGD|CAL0002719354 orf19.4532 [Candida albicans ( 0.877 0.731 0.458 3.8e-62
UNIPROTKB|Q59TJ7354 CaO19.4532 "Putative uncharact 0.877 0.731 0.458 3.8e-62
ZFIN|ZDB-GENE-060312-32381 myg1 "melanocyte proliferating 0.888 0.687 0.449 7.9e-62
TAIR|locus:2165760 AT5G41970 "AT5G41970" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1199 (427.1 bits), Expect = 6.5e-122, P = 6.5e-122
 Identities = 216/270 (80%), Positives = 249/270 (92%)

Query:    26 YDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFL 85
             YDP +D YDHHQKGFEEVFGHGF+TKLSSAGLVYKHFGKE+IAKELNV++ HPDV RLFL
Sbjct:   104 YDPEHDRYDHHQKGFEEVFGHGFNTKLSSAGLVYKHFGKEIIAKELNVEQDHPDVLRLFL 163

Query:    86 AVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQ 145
             AVYK+FMEAIDA+DNGIN+YDTD+PPRYVNNT+LS RVG+LNLDW +PDQS E+ENEAFQ
Sbjct:   164 AVYKSFMEAIDAVDNGINRYDTDQPPRYVNNTHLSPRVGRLNLDWIDPDQSQEKENEAFQ 223

Query:   146 QGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVLKRFCPWKLHLFEL 205
             + M LAGKEFL++V+F+ RSWLPARSIV++C+ ER+  DPSGEIM+L RFCPWKLHLFEL
Sbjct:   224 RAMALAGKEFLESVQFHARSWLPARSIVMQCLEERFKTDPSGEIMILDRFCPWKLHLFEL 283

Query:   206 EEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPDRFESRKPLPAQWRGLRDDELSKEAGIP 265
             E+EMKIEPLIKYV+Y+D+R KQWRVQAVAV+PDRFE+RKPLP +WRGLRD+ELSK A IP
Sbjct:   284 EQEMKIEPLIKYVIYQDERAKQWRVQAVAVAPDRFENRKPLPEKWRGLRDEELSKAAEIP 343

Query:   266 GCVFVHMSGFIGGNQSYGGALAMARAALKL 295
             GCVFVHMSGFIGGNQSY GAL+MA+ AL L
Sbjct:   344 GCVFVHMSGFIGGNQSYDGALSMAQTALTL 373




GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
GO:0005739 "mitochondrion" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0006626 "protein targeting to mitochondrion" evidence=RCA
TAIR|locus:2082981 AT3G49320 "AT3G49320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9HB07 C12orf10 "UPF0160 protein MYG1, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1359237 Myg1 "melanocyte proliferating gene 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1929864 Myg1 "melanocyte proliferating gene 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q58DG1 Q58DG1 "UPF0160 protein MYG1, mitochondrial" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0267768 DDB_G0267768 "metal-dependent protein hydrolase domain-containing protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
CGD|CAL0002719 orf19.4532 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q59TJ7 CaO19.4532 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060312-32 myg1 "melanocyte proliferating gene 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P40093YEY6_YEASTNo assigned EC number0.43260.92880.8106yesno
Q641W2MYG1_RATNo assigned EC number0.50170.92200.7139yesno
O17606YK4P_CAEELNo assigned EC number0.47580.94230.8176yesno
Q9P7T6YIW4_SCHPONo assigned EC number0.45450.92880.8456yesno
Q55G91U160_DICDINo assigned EC number0.46090.94230.8449yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00000534001
SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (338 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00021307001
SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (586 aa)
       0.756
GSVIVG00003436001
SubName- Full=Chromosome undetermined scaffold_143, whole genome shotgun sequence; (252 aa)
      0.751
GSVIVG00026600001
SubName- Full=Chromosome chr12 scaffold_38, whole genome shotgun sequence; (229 aa)
       0.714
GSVIVG00028481001
SubName- Full=Chromosome chr7 scaffold_44, whole genome shotgun sequence; (316 aa)
       0.705
GSVIVG00018613001
SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (399 aa)
       0.684
GSVIVG00017573001
SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (592 aa)
       0.671
GSVIVG00016571001
SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (474 aa)
       0.663
GSVIVG00007501001
SubName- Full=Chromosome chr7 scaffold_192, whole genome shotgun sequence; (315 aa)
       0.662
GSVIVG00001176001
SubName- Full=Chromosome chr2 scaffold_113, whole genome shotgun sequence; (605 aa)
       0.662
GSVIVG00037695001
SubName- Full=Chromosome undetermined scaffold_91, whole genome shotgun sequence; (245 aa)
       0.660

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query295
pfam03690315 pfam03690, UPF0160, Uncharacterized protein family 1e-152
COG4286306 COG4286, COG4286, Uncharacterized conserved protei 4e-82
>gnl|CDD|217674 pfam03690, UPF0160, Uncharacterized protein family (UPF0160) Back     alignment and domain information
 Score =  428 bits (1102), Expect = e-152
 Identities = 168/285 (58%), Positives = 205/285 (71%), Gaps = 7/285 (2%)

Query: 10  MQVLDDLDAVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAK 69
            +VL+  D V+DVGGVYDP    +DHHQ+GF E F     TKLSSAGLVYKHFGKE+I +
Sbjct: 38  PEVLEKCDIVVDVGGVYDPEKKRFDHHQRGFPETFLREDGTKLSSAGLVYKHFGKEIIRE 97

Query: 70  ELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLD 129
            L + +   DV  L+  VYK+F+E IDAIDNG++QYD    P+Y  NT+LS+RVG+LN  
Sbjct: 98  LLKLLD-EEDVELLYDKVYKSFVEEIDAIDNGVSQYDG--EPKYKINTSLSARVGRLNPT 154

Query: 130 WTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEI 189
           W EPD   E E+ AF + ++LAG EF   V +Y  SWLPAR+IV E IA+R++ DPSG I
Sbjct: 155 WNEPDP--EDEDAAFLKAVELAGSEFERFVDYYAASWLPARAIVAEAIAKRFEVDPSGRI 212

Query: 190 MVLKRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPDRFESRKPLPAQ 249
           +VL R CPWK HLFELE+E  +E  IK+VLY D  G QWRVQ V V P  FESRKPLP  
Sbjct: 213 LVLDRGCPWKEHLFELEKEHNLEG-IKFVLYPDGSG-QWRVQTVPVEPGSFESRKPLPEA 270

Query: 250 WRGLRDDELSKEAGIPGCVFVHMSGFIGGNQSYGGALAMARAALK 294
           WRGLRD+ELS+ +GIPG VFVH SGFIGG ++  GALAMA  AL+
Sbjct: 271 WRGLRDEELSEVSGIPGAVFVHASGFIGGAKTREGALAMAELALE 315


This family of proteins contains a large number of metal binding residues. The patterns are suggestive of a phosphoesterase function. The conserved DHH motif may mean this family is related to pfam01368. Length = 315

>gnl|CDD|226736 COG4286, COG4286, Uncharacterized conserved protein related to MYG1 family [Function unknown] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 295
KOG2948327 consensus Predicted metal-binding protein [General 100.0
PF03690318 UPF0160: Uncharacterised protein family (UPF0160); 100.0
COG4286306 Uncharacterized conserved protein related to MYG1 100.0
>KOG2948 consensus Predicted metal-binding protein [General function prediction only] Back     alignment and domain information
Probab=100.00  E-value=6.7e-117  Score=815.85  Aligned_cols=284  Identities=60%  Similarity=1.058  Sum_probs=275.4

Q ss_pred             CCccccccCCEEEecCccccCCCCCCCCCCCCccccccCCCccccccchhhHHHHHHHHHHHHhCCCCCChhHHHHHHHH
Q 022541            8 WGMQVLDDLDAVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAV   87 (295)
Q Consensus         8 ~d~~~l~~cDiVvDVGgvyDp~~~rfDHHQr~F~~t~~~~~~~~lSSAGLIykhfG~~ii~~~l~~~~~~~~~~~l~~kv   87 (295)
                      .||++|++|||||||||+|||+++|||||||+|++||+.+|+||||||||||||||+++|.++++...++++++.+|.+|
T Consensus        40 Rd~~~l~s~DIvvDVGg~yDp~~~ryDHHQr~F~ETfs~~~~tKLSSAGLIykhyG~~vi~~~l~~~~s~~~~~~l~~kv  119 (327)
T KOG2948|consen   40 RDPKVLESCDIVVDVGGVYDPEKKRYDHHQRGFFETFSPKYKTKLSSAGLIYKHYGREVISKILQNKVSSSDLDLLYDKV  119 (327)
T ss_pred             CCHHHHhhcCEEEecCccccccccccchhhhhhhhhcCCccceeecccceeHHHhhHHHHHHHhcccCChhHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999999999999998889999999999999


Q ss_pred             HHHHHHHHhhhhcCccccCCCCCCccccCCChhhhcccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 022541           88 YKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWL  167 (295)
Q Consensus        88 y~~fi~~IDaiDNGv~~~~~~~~~~y~~~~~lS~~V~~lNP~W~~~~~~~~~~d~~F~~A~~l~~~ef~~~v~~~~~~~l  167 (295)
                      |++||+++|||||||++|. +++|+|..+|+||+||++|||.||+.  ++++++++|.+||++++++|.+.|..++++|+
T Consensus       120 Y~~Fve~~DAiDNGi~~y~-~~~Pry~~~~~l~~rv~~~N~~w~e~--~~~~~~e~F~~Am~~vg~ef~~~v~~~~~sWl  196 (327)
T KOG2948|consen  120 YKNFVEALDAIDNGISQYG-EIEPRYKSSTSLSHRVGRFNPDWNED--SDDDEDERFQRAMDLVGKEFVNSVKFYANSWL  196 (327)
T ss_pred             HHHHHHHhhccccchhhhc-CCCCccccccchHHHHhhcCCCcccC--cchhHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            9999999999999999994 78999999999999999999999974  45789999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHhcCcCCCCcEEEEcCCCChhhHHHhhhhhhccCCcEEEEEEecCCCCCeEEEEEeCCCCCCccCCCCC
Q 022541          168 PARSIVVECIAERYDYDPSGEIMVLKRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPDRFESRKPLP  247 (295)
Q Consensus       168 pAr~~V~~A~~~R~~~~~sg~Ilvl~~~~PWk~hl~~lE~e~~~~~~i~fviyp~~~~~~wriq~Vp~~~~sF~~R~~LP  247 (295)
                      |||++|++|+++|+++|+||.|++++++||||+|||+||+|++++..|+||||++ .+++|||||||++++||++|+|||
T Consensus       197 Par~~v~~ai~er~~~d~sG~i~v~~~~cPWk~hlfelE~e~~ie~~i~fvlf~d-~~~~wRVqaVpv~p~sFe~R~pLp  275 (327)
T KOG2948|consen  197 PARELVEEAIAERFDVDPSGIILVLKQFCPWKEHLFELEKEYKIEVKIKFVLFTD-ESGSWRVQAVPVDPGSFESRKPLP  275 (327)
T ss_pred             cHHHHHHHHHHHhcCCCCCceEEEecCCCchHHHHHHHHHHhCCCcceEEEEEeC-CCCcEEEEEEecCCCcccccCCCc
Confidence            9999999999999999999999999999999999999999999999999999999 456999999999999999999999


Q ss_pred             cccCCCChHHHhhhhCCCCceEeecCCcccccCCHHHHHHHHHHHhcC
Q 022541          248 AQWRGLRDDELSKEAGIPGCVFVHMSGFIGGNQSYGGALAMARAALKL  295 (295)
Q Consensus       248 e~WrGlrdeeL~~vsGI~g~vFvH~sGFigg~kt~egAL~mA~~aL~~  295 (295)
                      ++|||||||+|+++||||||+|||+|||||||+|+||||+||++||+.
T Consensus       276 ~~WRGLrdeeLs~~SgIpgc~FVH~SGFIGgn~T~EgAl~Mar~sl~~  323 (327)
T KOG2948|consen  276 EPWRGLRDEELSEVSGIPGCIFVHASGFIGGNKTREGALEMARKSLEA  323 (327)
T ss_pred             hhhccccchhhhhhcCCCCeEEEeecccccCcccHHHHHHHHHHhhcc
Confidence            999999999999999999999999999999999999999999999963



>PF03690 UPF0160: Uncharacterised protein family (UPF0160); InterPro: IPR003226 The function of this domain is not known, but it is found in several uncharacterised proteins and a probable metal dependent protein hydrolase Back     alignment and domain information
>COG4286 Uncharacterized conserved protein related to MYG1 family [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query295
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-08
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 52.5 bits (125), Expect = 7e-08
 Identities = 28/284 (9%), Positives = 71/284 (25%), Gaps = 101/284 (35%)

Query: 7   IWGMQVLDDLD------------AVLDVGGVYDPSNDCYDHHQKGFEEVFGHGFSTKLSS 54
           +   +  +  +             V D       ++   DHH                  
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTP------------ 300

Query: 55  AGLVYKHFGKELIAKELNVDE---------GHPDVHRLFLAVYKNFMEAID--------- 96
                    K L+ K L+             +P    +     ++ +   D         
Sbjct: 301 ------DEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDK 354

Query: 97  ---AIDNGINQYD-TDKPPRYVN------NTNLSSRVGKLNLDWTEPDQSAERENEAFQQ 146
               I++ +N  +  +    +        + ++ + +  L+L W +     + +      
Sbjct: 355 LTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTIL--LSLIWFDVI---KSDVMVVVN 409

Query: 147 GMDLAGKEFLDTVRFYVRSWLPARSIVVEC-----------IAERYDYDPSGEIMVLKRF 195
              L     ++         +P+  + ++            I + Y+        + K F
Sbjct: 410 --KLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYN--------IPKTF 459

Query: 196 CPWKL---------------HLFELEEEMKIEPLIKYVLYEDDR 224
               L               HL  +E   ++       ++ D R
Sbjct: 460 DSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRM--VFLDFR 501


Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00