Citrus Sinensis ID: 022559

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-----
Protein Sequence
MDSNLIRVSAPFTFEPNNYLITKSRKSNRLSSFSQKKPFTLSFKLGNNKARNGVAFDESAYEAERLSMDAKARDLMAETSKRETESGAEDDPKSWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQVRLLTLSGGKKLLTPQPRLRTGFFSVLDSSMLSPSTINEACTSVGVAKYGKQIGLDEIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVTSGKCGFCRIFLPLFYLVLFILFVYCIESNL
Secondary Structure (PSIPRED)
cccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHccHHHHHccEEEEccccccHHHHHHHHHcccEEEEcccccccccEEEccccccccHHHHHHHHccccccccccccccccccccEEEEccEEEEcccccEEccccccHHHHHHHHHHcccccccccEEEcccEEEEEEEcccHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccEEEEEccccccccccccccccccccccccccccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHccHHHHHccEEEEccccccHHHHHHHHHcccEEEEcccccccccEEEccccccccHHHHHHHHHccHHHccccccccccccEEEEEEEEEEEccccccEEcccccHHHHHHHHHHHHccccccccEEEcccccHHHHHcHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mdsnlirvsapftfepnnylitksrksnrlssfsqkkpftlsfklgnnkarngvafdesAYEAERLSMDAKARDLMAETSkretesgaeddpksWKWIIRKRIWDLMEVQniaqnprpvhhripnfvGASVAAKNLTGLEEFRVagcvkvnpdspqkQVRLLTLsggkklltpqprlrtgffsvldssmlspstineACTSvgvakygkqigldeiiKVDLIVIGSvavnpktgarlgkgegfAELEYGMLRYmgaiddstpvvtsgkcgfcriflPLFYLVLFILFVYCIESNL
Flexible Loop (DISEMBL)
mdsnlirvsapftfepnnylitksrksnrlssfsqkkpftlsfklgnnkarngvaFDESAYEAERLSMDAKARDLMAEtskretesgaeddpkswKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVkvnpdspqkqVRLLTLsggkklltpqprLRTGFFSVLDSSMLSPSTINEACTSVGVAKYGKQIGLDEIIKVDLIVIGSVavnpktgarlgkgeGFAELEYGMLRYMGAIDDSTPVVTSGKCGFCRIFLPLFYLVLFILFVYCIESNL
Low Complexity Region (SEG)
MDSNLIRVSAPFTFEPNNYLITKSRKSNRLSSFSQKKPFTLSFKLGNNKARNGVAFDESAYEAERLSMDAKARDLMAETSKRETESGAEDDPKSWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQVRlltlsggkklltPQPRLRTGFFSVLDSSMLSPSTINEACTSVGVAKYGKQIGLDEIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVTSGKCGFCRiflplfylvlfilfvyCIESNL
Disordered region (IsUnstruct)
***********FTFEPNNYLI************************************************************************SWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVN*******VRLLTLSGGKKLLTPQPRLRTGFFSVLDSSMLSPSTINEACTSVGVAKYGKQIGLDEIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVTSGKCGFCRIFLPLFYLVLFILFVYCI****
Disordered Region (DISOPRED)
*****IR*SAPFTFEP********************************************************************************WIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQVRLLTLSGGKKLLTPQPRLRTGFFSVLDSSML**********SVGVAKYGKQIGLDEIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVTSGKCGFCRIFLPLFYLVLFILFVYCIESNL
Disordered Region (DISEMBL)
MDSNLIRVSAPFTFEPNNYLITKSRKSNRLSSFSQKKPFTLSFKLGNNKARNGVAFDESAYEAERLSMDAKAR*******************KSWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQVRLLTLSGGKKLLTPQPRLRTGFFSVLDSSMLSPSTINEACTSVGVAKYGKQIGLDEIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVTSGKCGFCRIFLPLFYLVLFILFVYCIESNL
Disordered Region (DISPRO)
*DSNLIRVSAPFTFEPNNYLITKS*******SFSQKKPFTLSFKLGNN****GVAFDESAYEAERLSMDAKARDLMAETSKRET***AEDDPKSWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQVRLLTLSGGKKLLTPQPRLRTGFFSVLDSSMLSPSTINEACTSVGVAKYGKQIGLDEIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVTSGKCGFCRIFLPLFYLVLFILFVYCIESNL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDSNLIRVSAPFTFEPNNYLITKSRKSNRLSSFSQKKPFTLSFKLGNNKARNGVAFDESAYEAERLSMDAKARDLMAETSKRETESGAEDDPKSWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQVRLLTLSGGKKLLTPQPRLRTGFFSVLDSSMLSPSTINEACTSVGVAKYGKQIGLDEIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVTSGKCGFCRIFLPLFYLVLFILFVYCIESNL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	295	2.2.26 [Sep-21-2011]
Q2KI24	380	Methenyltetrahydrofolate	yes	no	0.572	0.444	0.532	2e-43
Q2M296	383	Methenyltetrahydrofolate	no	no	0.572	0.441	0.520	1e-39
Q0P464	382	Methenyltetrahydrofolate	yes	no	0.572	0.442	0.461	5e-38
Q3URQ7	372	Methenyltetrahydrofolate	yes	no	0.596	0.473	0.510	1e-35
Q52L34	415	Methenyltetrahydrofolate	N/A	no	0.579	0.412	0.485	1e-33

>sp|Q2KI24|MTHSD_BOVIN Methenyltetrahydrofolate synthase domain-containing protein OS=Bos taurus GN=MTHFSD PE=2 SV=1

 Score =  176 bits (446), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 91/171 (53%), Positives = 114/171 (66%), Gaps = 2/171 (1%)

Query: 96  KWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSP 155
           K  IR++IWD ME QN+A  PRPVHHRIPNF GAS AA++   L+ F++A  +KVNPD+P
Sbjct: 9   KQDIREQIWDYMESQNLADFPRPVHHRIPNFKGASRAAEHFPRLQAFKMARTIKVNPDAP 68

Query: 156 QKQVRLLTLSGGKKLLTPQPRLRTGFFSVLDSSMLSPSTINEAC-TSVGVAKYGKQIGLD 214
           QK  R   L   K LL P PRLRTG F+ +     +   I   C TS GV  Y   +GLD
Sbjct: 69  QKNARFFVLESKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVRNYSTPVGLD 128

Query: 215 EIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVT 265
             + VDL+V+GSVAV+ K G R+GKGEG+A+LEY M+  MGA+   TPVVT
Sbjct: 129 SKVLVDLVVVGSVAVSEK-GWRIGKGEGYADLEYAMMVSMGAVSQGTPVVT 178

Bos taurus (taxid: 9913)

>sp|Q2M296|MTHSD_HUMAN Methenyltetrahydrofolate synthase domain-containing protein OS=Homo sapiens GN=MTHFSD PE=1 SV=2

 Score =  163 bits (413), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 89/171 (52%), Positives = 111/171 (64%), Gaps = 2/171 (1%)

Query: 96  KWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSP 155
           K  IR++IW  ME QN+A  PRPVHHRIPNF G+ +A +N+  L+ F     VKV+PD P
Sbjct: 10  KQDIREQIWGYMESQNLADFPRPVHHRIPNFKGSYLACQNIKDLDVFARTQEVKVDPDKP 69

Query: 156 QKQVRLLTLSGGKKLLTPQPRLRTGFFSVLDSSMLSPSTINEAC-TSVGVAKYGKQIGLD 214
            + VRLL L   K LL P PRLRTG F+ +     +   I   C TS GV  Y   IGLD
Sbjct: 70  LEGVRLLVLQSKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVRNYSVPIGLD 129

Query: 215 EIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVT 265
             + VDL+V+GSVAV+ K G R+GKGEG+A+LEY M+  MGA+   TPVVT
Sbjct: 130 SRVLVDLVVVGSVAVSEK-GWRIGKGEGYADLEYAMMVSMGAVSKETPVVT 179

Homo sapiens (taxid: 9606)

>sp|Q0P464|MTHSD_DANRE Methenyltetrahydrofolate synthase domain-containing protein OS=Danio rerio GN=mthfsd PE=2 SV=1

 Score =  158 bits (399), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 79/171 (46%), Positives = 113/171 (66%), Gaps = 2/171 (1%)

Query: 96  KWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSP 155
           KW +R ++W+ +EV+N+A  PRPVH+RIPNF GA  A   +  LE F  +  VKV+PD P
Sbjct: 13  KWDVRHKVWNYIEVKNLANFPRPVHNRIPNFKGALEACNKVAQLEIFIESAVVKVDPDKP 72

Query: 156 QKQVRLLTLSGGKKLLTPQPRLRTGFFS-VLDSSMLSPSTINEACTSVGVAKYGKQIGLD 214
            + VRL  L   K LL P PRLR G F+ +      +  T+    TS G+ ++   +GLD
Sbjct: 73  MEGVRLAALKARKSLLVPTPRLRFGLFNRITPPKGATKETLRVCSTSQGIKEFSVPVGLD 132

Query: 215 EIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVT 265
           + ++VDL+V+GSVAV+ K G R+GKGEGFA++EY M+  MG++ +ST V+T
Sbjct: 133 DKVQVDLVVVGSVAVSEK-GYRIGKGEGFADMEYAMMACMGSVTESTWVIT 182

Danio rerio (taxid: 7955)

>sp|Q3URQ7|MTHSD_MOUSE Methenyltetrahydrofolate synthase domain-containing protein OS=Mus musculus GN=Mthfsd PE=2 SV=1

 Score =  150 bits (378), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/184 (51%), Positives = 117/184 (63%), Gaps = 8/184 (4%)

Query: 83  ETESGAEDDPKSWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEF 142
           ET+ G        K  IR+RIWD ME  +IA  PRPVHHRIPNF GA+ AA +L  L+ F
Sbjct: 2   ETQEGVS------KQSIRERIWDYMESHDIADFPRPVHHRIPNFKGAAQAAGHLPHLQAF 55

Query: 143 RVAGCVKVNPDSPQKQVRLLTLSGGKKLLTPQPRLRTGFFSVLDSSMLSPSTINEAC-TS 201
            VA  +KVNPD+PQ+  R L L   K LL P PRLRTG F+ +     +   I   C TS
Sbjct: 56  HVARTIKVNPDAPQRNARFLVLESKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATS 115

Query: 202 VGVAKYGKQIGLDEIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDST 261
            GV  +   +GLD  + VDL+V+GSVAV+ K G R+GKGEG+A+LEY M+  MGA+   T
Sbjct: 116 QGVRNFSVPVGLDSSVLVDLVVVGSVAVSEK-GWRIGKGEGYADLEYAMMVSMGAVHKGT 174

Query: 262 PVVT 265
           PVVT
Sbjct: 175 PVVT 178

Mus musculus (taxid: 10090)

>sp|Q52L34|MTHSD_XENLA Methenyltetrahydrofolate synthase domain-containing protein OS=Xenopus laevis GN=mthfsd PE=2 SV=1

 Score =  143 bits (361), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/173 (48%), Positives = 109/173 (63%), Gaps = 2/173 (1%)

Query: 85  ESGAEDDPKSWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRV 144
           E G   DP   KW IR+++WD +E  N+A  PRPVHHRIPNF  +  A +N+  LE FR 
Sbjct: 2   EPGIRVDPGCSKWDIRQKVWDYIENNNLADFPRPVHHRIPNFKESHQACQNIIDLEVFRR 61

Query: 145 AGCVKVNPDSPQKQVRLLTLSGGKKLLTPQPRLRTGFFSVLDSSMLSPSTINEAC-TSVG 203
              VKV+PD P + VRL  L   K LL P PRLRTG F+ +     +   +   C TS G
Sbjct: 62  TWEVKVDPDKPLEGVRLAALQARKTLLVPTPRLRTGLFNKITPPPGANKEVLRICSTSQG 121

Query: 204 VAKYGKQIGLDEIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGA 256
           V  Y   +GLD  ++VDL+V+GSVAV+ + G R+GKGEGFA++EY M+  MGA
Sbjct: 122 VKDYSVPMGLDAKVQVDLVVVGSVAVSVQ-GWRIGKGEGFADMEYAMMVSMGA 173

Xenopus laevis (taxid: 8355)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	295
225460626	354	PREDICTED: methenyltetrahydrofolate synt	0.857	0.714	0.699	1e-104
296081201	351	unnamed protein product [Vitis vinifera]	0.847	0.712	0.702	1e-103
255566646	360	catalytic, putative [Ricinus communis] g	0.881	0.722	0.700	1e-100
449446407	373	PREDICTED: methenyltetrahydrofolate synt	0.894	0.707	0.664	9e-97
18411187	354	5-formyltetrahydrofolate cyclo-ligase [A	0.850	0.709	0.666	1e-95
297842435	354	5-formyltetrahydrofolate cyclo-ligase fa	0.874	0.728	0.672	5e-95
449520627	275	PREDICTED: methenyltetrahydrofolate synt	0.898	0.963	0.659	1e-94
26453210	354	unknown protein [Arabidopsis thaliana]	0.850	0.709	0.655	1e-93
224082484	283	predicted protein [Populus trichocarpa]	0.647	0.674	0.874	2e-93
388515639	345	unknown [Medicago truncatula]	0.850	0.727	0.662	5e-93

>gi|225460626|ref|XP_002264601.1| PREDICTED: methenyltetrahydrofolate synthase domain-containing protein-like [Vitis vinifera]

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/276 (69%), Positives = 224/276 (81%), Gaps = 23/276 (8%)

Query: 1   MDSNLIRVSAPFTFEPNNYLITKSRKSNRLSSFSQKKPFTLSFKLGNNK----------A 50
           MD+ +IR+S+PF       +  K   S   +SFS   PF+L+  +G ++          +
Sbjct: 1   MDA-MIRISSPFA------IFNKPHDSP--TSFSFSVPFSLNKNVGGSRNYQKLGSSRSS 51

Query: 51  RNGVAFDESAYEAERLSMDAKARDLMAETSKRETESGAEDDPKSWKWIIRKRIWDLMEVQ 110
           RN   FDE+A+EAERL++DA+AR+ MAE SKRETE+    DPK+WKW+IRKR+WD ME +
Sbjct: 52  RNDAVFDEAAFEAERLTLDARARESMAEASKRETET----DPKAWKWVIRKRVWDFMETR 107

Query: 111 NIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQVRLLTLSGGKKL 170
           NIAQNPRPVHHRIPNFVGA+ AA+ L GLE F VA CVKVNPDSPQKQVR LTLSGGKKL
Sbjct: 108 NIAQNPRPVHHRIPNFVGAAAAAQKLGGLEAFGVAKCVKVNPDSPQKQVRFLTLSGGKKL 167

Query: 171 LTPQPRLRTGFFSVLDSSMLSPSTINEACTSVGVAKYGKQIGLDEIIKVDLIVIGSVAVN 230
           LTPQPRLRTGFFSVL+SSML+PSTINEACTSVGVAKYG+ IGLDE IKVDLIVIGSVAV+
Sbjct: 168 LTPQPRLRTGFFSVLESSMLTPSTINEACTSVGVAKYGRPIGLDEQIKVDLIVIGSVAVD 227

Query: 231 PKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVTS 266
           PKTGARLGKGEGFAELEYGMLRYMGAIDD+TP+VTS
Sbjct: 228 PKTGARLGKGEGFAELEYGMLRYMGAIDDTTPIVTS 263

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081201|emb|CBI18227.3| unnamed protein product [Vitis vinifera]

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/272 (70%), Positives = 221/272 (81%), Gaps = 22/272 (8%)

Query: 5   LIRVSAPFTFEPNNYLITKSRKSNRLSSFSQKKPFTLSFKLGNNK----------ARNGV 54
           +IR+S+PF       +  K   S   +SFS   PF+L+  +G ++          +RN  
Sbjct: 1   MIRISSPFA------IFNKPHDSP--TSFSFSVPFSLNKNVGGSRNYQKLGSSRSSRNDA 52

Query: 55  AFDESAYEAERLSMDAKARDLMAETSKRETESGAEDDPKSWKWIIRKRIWDLMEVQNIAQ 114
            FDE+A+EAERL++DA+AR+ MAE SKRETE+    DPK+WKW+IRKR+WD ME +NIAQ
Sbjct: 53  VFDEAAFEAERLTLDARARESMAEASKRETET----DPKAWKWVIRKRVWDFMETRNIAQ 108

Query: 115 NPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQVRLLTLSGGKKLLTPQ 174
           NPRPVHHRIPNFVGA+ AA+ L GLE F VA CVKVNPDSPQKQVR LTLSGGKKLLTPQ
Sbjct: 109 NPRPVHHRIPNFVGAAAAAQKLGGLEAFGVAKCVKVNPDSPQKQVRFLTLSGGKKLLTPQ 168

Query: 175 PRLRTGFFSVLDSSMLSPSTINEACTSVGVAKYGKQIGLDEIIKVDLIVIGSVAVNPKTG 234
           PRLRTGFFSVL+SSML+PSTINEACTSVGVAKYG+ IGLDE IKVDLIVIGSVAV+PKTG
Sbjct: 169 PRLRTGFFSVLESSMLTPSTINEACTSVGVAKYGRPIGLDEQIKVDLIVIGSVAVDPKTG 228

Query: 235 ARLGKGEGFAELEYGMLRYMGAIDDSTPVVTS 266
           ARLGKGEGFAELEYGMLRYMGAIDD+TP+VTS
Sbjct: 229 ARLGKGEGFAELEYGMLRYMGAIDDTTPIVTS 260

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255566646|ref|XP_002524307.1| catalytic, putative [Ricinus communis] gi|223536398|gb|EEF38047.1| catalytic, putative [Ricinus communis]

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 192/274 (70%), Positives = 214/274 (78%), Gaps = 14/274 (5%)

Query: 1   MDSNLIRVSAPFTFEPN----NYLITKSRKSNRLSS---FSQKKPFTLSFKLGNNKAR-N 52
           MDS L R++AP + + +    NY    S  S  LS    FS      L     N +A  N
Sbjct: 1   MDSTLTRIAAPLSLKQSIRFSNYRNFHSLPSRELSVQRLFSSNP--NLETSSSNRRAPGN 58

Query: 53  GVAFDESAYEAERLSMDAKARDLMAETSKRETESGAEDDPKSWKWIIRKRIWDLMEVQNI 112
              FDES +EAERL +DAKAR+ MAETSK E +     DPK+WKW+IRKRIWD ME +NI
Sbjct: 59  DTVFDESTFEAERLRLDAKARESMAETSKLEMQL----DPKAWKWVIRKRIWDFMEARNI 114

Query: 113 AQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQVRLLTLSGGKKLLT 172
           AQNPRPVHHRIPNF+GAS AA+N+ GLE F  AGCVKVNPDSPQKQVR LTLSGGK+LLT
Sbjct: 115 AQNPRPVHHRIPNFIGASAAAQNMAGLEVFHDAGCVKVNPDSPQKQVRFLTLSGGKELLT 174

Query: 173 PQPRLRTGFFSVLDSSMLSPSTINEACTSVGVAKYGKQIGLDEIIKVDLIVIGSVAVNPK 232
           PQPRLRTGFFSVL+S ML+P+TI EACTSVGVAKYG+ IGLDE IKVDLIVIGSVAV+PK
Sbjct: 175 PQPRLRTGFFSVLESDMLAPNTILEACTSVGVAKYGRPIGLDEKIKVDLIVIGSVAVDPK 234

Query: 233 TGARLGKGEGFAELEYGMLRYMGAIDDSTPVVTS 266
           TGARLGKGEGFAELEYGMLRYMGAIDDSTPVVTS
Sbjct: 235 TGARLGKGEGFAELEYGMLRYMGAIDDSTPVVTS 268

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446407|ref|XP_004140963.1| PREDICTED: methenyltetrahydrofolate synthase domain-containing protein-like [Cucumis sativus]

 Score =  359 bits (921), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 182/274 (66%), Positives = 211/274 (77%), Gaps = 10/274 (3%)

Query: 1   MDSNLIRVSAPFTFEPNNYLITKSRKSNRLSSFS-------QKKPFTL-SFKLGNNKARN 52
           MDS LI++S P +    + L+   R    +SS S       Q++ F L S K G    + 
Sbjct: 1   MDSILIQLSQPLSL--RSTLLNAIRTPPSISSISLGENLHFQRRHFNLDSTKNGGTDTQR 58

Query: 53  GVAFDESAYEAERLSMDAKARDLMAETSKRETESGAEDDPKSWKWIIRKRIWDLMEVQNI 112
              FDE A+EAER  +DA+AR  MAE S R+TE  ++DDPK+WKW+IRKRIWD ME QN+
Sbjct: 59  DPPFDEPAFEAERSRLDAQARKSMAEASIRDTEGASDDDPKAWKWVIRKRIWDFMESQNV 118

Query: 113 AQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQVRLLTLSGGKKLLT 172
           A NPRPVHHRIPNF+GA  AA  L  LE FR + CVKVNPDSPQK VRLLTL+GGKKLLT
Sbjct: 119 AANPRPVHHRIPNFIGAMEAANRLCDLEVFRNSQCVKVNPDSPQKGVRLLTLTGGKKLLT 178

Query: 173 PQPRLRTGFFSVLDSSMLSPSTINEACTSVGVAKYGKQIGLDEIIKVDLIVIGSVAVNPK 232
           PQPRLRTGFFS+++S ML+P+TI EACTSVGVAKYGK IGLDE IKVDLIVIGSVAV+PK
Sbjct: 179 PQPRLRTGFFSIVESGMLTPATIKEACTSVGVAKYGKPIGLDEKIKVDLIVIGSVAVDPK 238

Query: 233 TGARLGKGEGFAELEYGMLRYMGAIDDSTPVVTS 266
           TGA+LGKGEGFAELEYGMLRYMGAIDDST +VTS
Sbjct: 239 TGAQLGKGEGFAELEYGMLRYMGAIDDSTLIVTS 272

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18411187|ref|NP_565139.1| 5-formyltetrahydrofolate cyclo-ligase [Arabidopsis thaliana] gi|6143890|gb|AAF04436.1|AC010718_5 hypothetical protein; 41475-39805 [Arabidopsis thaliana] gi|90093282|gb|ABD85154.1| At1g76730 [Arabidopsis thaliana] gi|332197762|gb|AEE35883.1| 5-formyltetrahydrofolate cyclo-ligase [Arabidopsis thaliana]

 Score =  355 bits (911), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 182/273 (66%), Positives = 210/273 (76%), Gaps = 22/273 (8%)

Query: 5   LIRVSAPFTFEPNNYLITKSRKSNRLSSF--SQKKPFTLSFKLGNNKAR---------NG 53
           +IR+S  F   P            R  SF  SQK PF LS ++G+ +           +G
Sbjct: 1   MIRLSPGFAINPRF----------RSDSFVNSQKPPF-LSVQIGSQRRNLSRIGSENGDG 49

Query: 54  VAFDESAYEAERLSMDAKARDLMAETSKRETESGAEDDPKSWKWIIRKRIWDLMEVQNIA 113
           VAFD  AYEA+RLS+DA A + MAET+K+E ES  + DPK+WKW+IRK++WDLME +N A
Sbjct: 50  VAFDAVAYEADRLSLDAAAMEDMAETAKKELESDPDSDPKAWKWVIRKKMWDLMEARNYA 109

Query: 114 QNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQVRLLTLSGGKKLLTP 173
            +PRPVHHRIPNFVGAS AA+ L  L+ FR+A  VKVNPDSPQKQ+R LTLSG KKLLTP
Sbjct: 110 MSPRPVHHRIPNFVGASAAARKLAELDAFRMAMVVKVNPDSPQKQIRFLTLSGEKKLLTP 169

Query: 174 QPRLRTGFFSVLDSSMLSPSTINEACTSVGVAKYGKQIGLDEIIKVDLIVIGSVAVNPKT 233
           QPRLRTGFFSVL+S +L P TI EACTSVGVAKYG+ IGLDE IKVDLIVIGSVAVNP+T
Sbjct: 170 QPRLRTGFFSVLESDLLKPETIMEACTSVGVAKYGRAIGLDEKIKVDLIVIGSVAVNPQT 229

Query: 234 GARLGKGEGFAELEYGMLRYMGAIDDSTPVVTS 266
           GARLGKGEGFAELEYGMLRYMGAIDDSTPVVT+
Sbjct: 230 GARLGKGEGFAELEYGMLRYMGAIDDSTPVVTT 262

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842435|ref|XP_002889099.1| 5-formyltetrahydrofolate cyclo-ligase family protein [Arabidopsis lyrata subsp. lyrata] gi|297334940|gb|EFH65358.1| 5-formyltetrahydrofolate cyclo-ligase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  353 bits (906), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 179/266 (67%), Positives = 214/266 (80%), Gaps = 8/266 (3%)

Query: 5   LIRVSAPFTFEP--NNYLITKSRKSNRLSSF--SQKKPFTLSFKLGNNKARNGVAFDESA 60
           +IR+S  F   P   +     S+KS  LS+   S+++ F+   ++G+    +GVAFD  A
Sbjct: 1   MIRLSPGFAINPCFRSNTFVNSQKSISLSAQIGSRRRNFS---RIGSESG-DGVAFDAVA 56

Query: 61  YEAERLSMDAKARDLMAETSKRETESGAEDDPKSWKWIIRKRIWDLMEVQNIAQNPRPVH 120
           YE+ERLS+DA A + MAET+K+E ES  ++DPK+WKW+IRK++WDLME +N A +PRPVH
Sbjct: 57  YESERLSLDAAAMEDMAETAKKELESDPDNDPKAWKWVIRKKMWDLMEARNYAMSPRPVH 116

Query: 121 HRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQVRLLTLSGGKKLLTPQPRLRTG 180
           HRIPNFVGAS AA+ L  L++FR A  VKVNPDSPQKQ+R LTLSG KKLLTPQPRLRTG
Sbjct: 117 HRIPNFVGASAAARKLAELDDFRKAMVVKVNPDSPQKQIRFLTLSGDKKLLTPQPRLRTG 176

Query: 181 FFSVLDSSMLSPSTINEACTSVGVAKYGKQIGLDEIIKVDLIVIGSVAVNPKTGARLGKG 240
           FFSVL+S +L P TI EACTSVGVAKYG+ IGLDE IKVDLIVIGSVAVNP+TGARLGKG
Sbjct: 177 FFSVLESDLLKPETIMEACTSVGVAKYGRAIGLDEKIKVDLIVIGSVAVNPQTGARLGKG 236

Query: 241 EGFAELEYGMLRYMGAIDDSTPVVTS 266
           EGFAELEYGMLRYMGAIDDSTPVVT+
Sbjct: 237 EGFAELEYGMLRYMGAIDDSTPVVTT 262

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449520627|ref|XP_004167335.1| PREDICTED: methenyltetrahydrofolate synthase domain-containing protein-like, partial [Cucumis sativus]

 Score =  352 bits (904), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 182/276 (65%), Positives = 211/276 (76%), Gaps = 11/276 (3%)

Query: 1   MDSNLIRVSAPFTFEPNNYLITKSRKSNRLSSFS-------QKKPFTL-SFKLGNNKARN 52
           MDS LI++S P +    + L+   R    +SS S       Q++ F L S K G    + 
Sbjct: 1   MDSILIQLSQPLSLR--STLLNAIRTPPSISSISLGGNLHFQRRHFKLDSTKNGGTDTQR 58

Query: 53  GVAFDESAYEAERLSMDAKARDLMAETSKRETESGAEDDPKSWKWIIRKRIWDLMEVQNI 112
              FDE A+EAER  +DA+AR  MAE S R+TE  ++DDPK+WKW+IRKRIWD ME QN+
Sbjct: 59  DPPFDEPAFEAERSRLDAQARKSMAEASIRDTEGASDDDPKAWKWVIRKRIWDFMESQNV 118

Query: 113 AQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQVRLLTLSGG-KKLL 171
           A NPRPVHHRIPNF+GA  AA  L  LE FR + CVKVNPDSPQK VRLLTL+G  +KLL
Sbjct: 119 AANPRPVHHRIPNFIGAMEAANRLCDLEVFRNSQCVKVNPDSPQKGVRLLTLTGQWQKLL 178

Query: 172 TPQPRLRTGFFSVLDSSMLSPSTINEACTSVGVAKYGKQIGLDEIIKVDLIVIGSVAVNP 231
           TPQPRLRTGFFS+++S ML+P+TI EACTSVGVAKYGK IGLDE IKVDLIVIGSVAV+P
Sbjct: 179 TPQPRLRTGFFSIVESGMLTPATIKEACTSVGVAKYGKPIGLDEKIKVDLIVIGSVAVDP 238

Query: 232 KTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVTSG 267
           KTGARLGKGEGFAELEYGMLRYMGAIDDST +VTSG
Sbjct: 239 KTGARLGKGEGFAELEYGMLRYMGAIDDSTLIVTSG 274

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|26453210|dbj|BAC43679.1| unknown protein [Arabidopsis thaliana]

 Score =  349 bits (895), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 179/273 (65%), Positives = 208/273 (76%), Gaps = 22/273 (8%)

Query: 5   LIRVSAPFTFEPNNYLITKSRKSNRLSSF--SQKKPFTLSFKLGNNKAR---------NG 53
           +IR+S  F   P            R  SF  SQK PF LS ++G+ +           +G
Sbjct: 1   MIRLSPGFAINPRF----------RSDSFVNSQKPPF-LSVQIGSQRRNLSRIGSENGDG 49

Query: 54  VAFDESAYEAERLSMDAKARDLMAETSKRETESGAEDDPKSWKWIIRKRIWDLMEVQNIA 113
           VAFD  AYEA+RLS+DA A + MAET+K+E ES  + DP++WKW+IRK++WDLME +  A
Sbjct: 50  VAFDAVAYEADRLSLDAAAMEDMAETAKKELESDPDSDPRAWKWVIRKKMWDLMEARYYA 109

Query: 114 QNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQVRLLTLSGGKKLLTP 173
            +PRPVHHRIPNFVGAS AA+ L  L+ FR+A  VKVNPDSPQKQ+R LTLSG KKLLTP
Sbjct: 110 MSPRPVHHRIPNFVGASAAARKLAELDAFRMAMVVKVNPDSPQKQIRFLTLSGEKKLLTP 169

Query: 174 QPRLRTGFFSVLDSSMLSPSTINEACTSVGVAKYGKQIGLDEIIKVDLIVIGSVAVNPKT 233
           QPRLRTGFFSVL+S +L P TI EACTSVGVAKYG+ IGLDE IKVDLIVIGSVAVNP+T
Sbjct: 170 QPRLRTGFFSVLESDLLKPETIMEACTSVGVAKYGRAIGLDEKIKVDLIVIGSVAVNPQT 229

Query: 234 GARLGKGEGFAELEYGMLRYMGAIDDSTPVVTS 266
           G RLGKGEGFAELEYGMLRYMGAIDDSTPVVT+
Sbjct: 230 GVRLGKGEGFAELEYGMLRYMGAIDDSTPVVTT 262

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082484|ref|XP_002306710.1| predicted protein [Populus trichocarpa] gi|222856159|gb|EEE93706.1| predicted protein [Populus trichocarpa]

 Score =  348 bits (892), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 167/191 (87%), Positives = 177/191 (92%)

Query: 76  MAETSKRETESGAEDDPKSWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKN 135
           MAETSKRE E+ +EDDPK+WKW+IRKRIWDLME +NIAQNPRPVHHRIPNFVGAS AAK 
Sbjct: 1   MAETSKREMETSSEDDPKAWKWVIRKRIWDLMEARNIAQNPRPVHHRIPNFVGASAAAKM 60

Query: 136 LTGLEEFRVAGCVKVNPDSPQKQVRLLTLSGGKKLLTPQPRLRTGFFSVLDSSMLSPSTI 195
           L+GLE F  A CVKVNPDSPQKQVR LTLSGGKKLLTPQPRLRTGFFS+L+S MLSPSTI
Sbjct: 61  LSGLEVFLEASCVKVNPDSPQKQVRFLTLSGGKKLLTPQPRLRTGFFSILESHMLSPSTI 120

Query: 196 NEACTSVGVAKYGKQIGLDEIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMG 255
           NEACTSVGVAK G+ IGLDE IKVDLIVIGSVAV+PKTGARLGKGEGFAELEYGMLRYMG
Sbjct: 121 NEACTSVGVAKNGRPIGLDEKIKVDLIVIGSVAVDPKTGARLGKGEGFAELEYGMLRYMG 180

Query: 256 AIDDSTPVVTS 266
           AIDDSTPVVTS
Sbjct: 181 AIDDSTPVVTS 191

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388515639|gb|AFK45881.1| unknown [Medicago truncatula]

 Score =  347 bits (889), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 177/267 (66%), Positives = 203/267 (76%), Gaps = 16/267 (5%)

Query: 1   MDSNLIRVSAPFTFEPNNYLITKSRKSNRLSSFSQKKPFTLSFKL-GNNKARNGVAFDES 59
           M++  +R+  PFT  P               S S K   ++SFKL   N   N  +F+E+
Sbjct: 1   METQALRLRYPFTLSP------------LYRSLSTKPHTSISFKLEATNSNNNKASFNEA 48

Query: 60  AYEAERLSMDAKARDLMAETSKRETESGAEDDPKSWKWIIRKRIWDLMEVQNIAQNPRPV 119
           A+EAERL++DA+AR  MA     E +S  +DDPK+WKW+IRKRIWDLME  N AQNPRPV
Sbjct: 49  AFEAERLTLDAEARRAMA---VEEEKSSMQDDPKAWKWVIRKRIWDLMEGNNFAQNPRPV 105

Query: 120 HHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQVRLLTLSGGKKLLTPQPRLRT 179
           HHRIPNFVGAS+AA  +  L+ FR A CVKVNPDSPQK VR LTLS GKKLLTPQPRLRT
Sbjct: 106 HHRIPNFVGASLAADKMRALDVFRDAQCVKVNPDSPQKPVRFLTLSDGKKLLTPQPRLRT 165

Query: 180 GFFSVLDSSMLSPSTINEACTSVGVAKYGKQIGLDEIIKVDLIVIGSVAVNPKTGARLGK 239
           GFFSV++S+ML+  TI EACTSVGVAKYG+ IGLDE IKVDLIVIGSVAV+P TGARLGK
Sbjct: 166 GFFSVIESNMLTSGTIKEACTSVGVAKYGRPIGLDEKIKVDLIVIGSVAVDPNTGARLGK 225

Query: 240 GEGFAELEYGMLRYMGAIDDSTPVVTS 266
           GEGFAELEYGMLRYMGAIDDST VVTS
Sbjct: 226 GEGFAELEYGMLRYMGAIDDSTLVVTS 252

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	295
TAIR|locus:2030111	354	COG0212 "AT1G76730" [Arabidops	0.803	0.669	0.678	2.2e-82
UNIPROTKB|Q2KI24	380	MTHFSD "Methenyltetrahydrofola	0.562	0.436	0.511	3.7e-39
MGI|MGI:2679252	372	Mthfsd "methenyltetrahydrofola	0.572	0.454	0.502	7e-38
UNIPROTKB|F1PFM7	359	MTHFSD "Uncharacterized protei	0.562	0.462	0.494	2.1e-36
UNIPROTKB|F1S6I6	367	MTHFSD "Uncharacterized protei	0.562	0.452	0.485	3.1e-35
UNIPROTKB|H3BQU0	233	MTHFSD "Methenyltetrahydrofola	0.562	0.712	0.488	4e-35
UNIPROTKB|H3BSD1	224	MTHFSD "Methenyltetrahydrofola	0.562	0.741	0.488	4e-35
UNIPROTKB|Q2M296	383	MTHFSD "Methenyltetrahydrofola	0.562	0.433	0.488	4e-35
ZFIN|ZDB-GENE-030131-3513	382	mthfsd "methenyltetrahydrofola	0.572	0.442	0.432	1.3e-34
UNIPROTKB|E1C7K5	265	MTHFSD "Uncharacterized protei	0.562	0.626	0.428	9.5e-34

TAIR|locus:2030111 COG0212 "AT1G76730" [Arabidopsis thaliana (taxid:3702)]

 Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
 Identities = 169/249 (67%), Positives = 195/249 (78%)

Query:    29 RLSSF--SQKKPFTLSFKLGN---NKAR------NGVAFDESAYEAERLSMDAKARDLMA 77
             R  SF  SQK PF LS ++G+   N +R      +GVAFD  AYEA+RLS+DA A + MA
Sbjct:    15 RSDSFVNSQKPPF-LSVQIGSQRRNLSRIGSENGDGVAFDAVAYEADRLSLDAAAMEDMA 73

Query:    78 ETSKRETESGAEDDPKSWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLT 137
             ET+K+E ES  + DPK+WKW+IRK++WDLME +N A +PRPVHHRIPNFVGAS AA+ L 
Sbjct:    74 ETAKKELESDPDSDPKAWKWVIRKKMWDLMEARNYAMSPRPVHHRIPNFVGASAAARKLA 133

Query:   138 GLEEFRVAGCVKVNPDSPQKQVRXXXXXXXXXXXXPQPRLRTGFFSVLDSSMLSPSTINE 197
              L+ FR+A  VKVNPDSPQKQ+R            PQPRLRTGFFSVL+S +L P TI E
Sbjct:   134 ELDAFRMAMVVKVNPDSPQKQIRFLTLSGEKKLLTPQPRLRTGFFSVLESDLLKPETIME 193

Query:   198 ACTSVGVAKYGKQIGLDEIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAI 257
             ACTSVGVAKYG+ IGLDE IKVDLIVIGSVAVNP+TGARLGKGEGFAELEYGMLRYMGAI
Sbjct:   194 ACTSVGVAKYGRAIGLDEKIKVDLIVIGSVAVNPQTGARLGKGEGFAELEYGMLRYMGAI 253

Query:   258 DDSTPVVTS 266
             DDSTPVVT+
Sbjct:   254 DDSTPVVTT 262

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity" evidence=IDA

GO:0000023 "maltose metabolic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019252 "starch biosynthetic process" evidence=RCA

UNIPROTKB|Q2KI24 MTHFSD "Methenyltetrahydrofolate synthase domain-containing protein" [Bos taurus (taxid:9913)]

 Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
 Identities = 86/168 (51%), Positives = 109/168 (64%)

Query:    99 IRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQ 158
             IR++IWD ME QN+A  PRPVHHRIPNF GAS AA++   L+ F++A  +KVNPD+PQK 
Sbjct:    12 IREQIWDYMESQNLADFPRPVHHRIPNFKGASRAAEHFPRLQAFKMARTIKVNPDAPQKN 71

Query:   159 VRXXXXXXXXXXXXPQPRLRTGFFSVLDSSMLSPSTINEAC-TSVGVAKYGKQIGLDEII 217
              R            P PRLRTG F+ +     +   I   C TS GV  Y   +GLD  +
Sbjct:    72 ARFFVLESKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVRNYSTPVGLDSKV 131

Query:   218 KVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVT 265
              VDL+V+GSVAV+ K G R+GKGEG+A+LEY M+  MGA+   TPVVT
Sbjct:   132 LVDLVVVGSVAVSEK-GWRIGKGEGYADLEYAMMVSMGAVSQGTPVVT 178

GO:0003723 "RNA binding" evidence=IEA

GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity" evidence=IEA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

MGI|MGI:2679252 Mthfsd "methenyltetrahydrofolate synthetase domain containing" [Mus musculus (taxid:10090)]

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 86/171 (50%), Positives = 108/171 (63%)

Query:    96 KWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSP 155
             K  IR+RIWD ME  +IA  PRPVHHRIPNF GA+ AA +L  L+ F VA  +KVNPD+P
Sbjct:     9 KQSIRERIWDYMESHDIADFPRPVHHRIPNFKGAAQAAGHLPHLQAFHVARTIKVNPDAP 68

Query:   156 QKQVRXXXXXXXXXXXXPQPRLRTGFFSVLDSSMLSPSTINEAC-TSVGVAKYGKQIGLD 214
             Q+  R            P PRLRTG F+ +     +   I   C TS GV  +   +GLD
Sbjct:    69 QRNARFLVLESKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVRNFSVPVGLD 128

Query:   215 EIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVT 265
               + VDL+V+GSVAV+ K G R+GKGEG+A+LEY M+  MGA+   TPVVT
Sbjct:   129 SSVLVDLVVVGSVAVSEK-GWRIGKGEGYADLEYAMMVSMGAVHKGTPVVT 178

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity" evidence=IEA

UNIPROTKB|F1PFM7 MTHFSD "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 83/168 (49%), Positives = 105/168 (62%)

Query:    99 IRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQ 158
             IR++IWD ME QN+A  PRPVHHRIPNF G+ +A +N+  LE F     VKV+PD P + 
Sbjct:    14 IRQQIWDYMESQNLADFPRPVHHRIPNFKGSYLACQNIRDLEVFTRTQEVKVDPDKPLEG 73

Query:   159 VRXXXXXXXXXXXXPQPRLRTGFFSVLDSSMLSPSTINEAC-TSVGVAKYGKQIGLDEII 217
             VR            P PRLRTG F+ +     +   I   C TS GV  Y   +GLD  +
Sbjct:    74 VRLLMLQSKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVRNYSTPVGLDSKV 133

Query:   218 KVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVT 265
              VDL+V+GSVAV+ K G R+GKGEG+A+LEY M+  MGA+   TPVVT
Sbjct:   134 PVDLVVVGSVAVSEK-GWRIGKGEGYADLEYAMMVSMGAVSQGTPVVT 180

GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity" evidence=IEA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1S6I6 MTHFSD "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 82/169 (48%), Positives = 106/169 (62%)

Query:    99 IRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQ 158
             IR+RIWD ME +N+A  PRPVHHRIPNF G+S+A +N+  LE F     VKV+PD P + 
Sbjct:    16 IRERIWDYMESENLADFPRPVHHRIPNFKGSSLACQNIRDLEVFARTREVKVDPDKPLEG 75

Query:   159 VRXXXXXXXXXXXX-PQPRLRTGFFSVLDSSMLSPSTINEAC-TSVGVAKYGKQIGLDEI 216
             VR             P PRLRTG F+ +     +   +   C TS GV  Y   +GL+  
Sbjct:    76 VRLLALQKSKKTLLVPTPRLRTGLFNKITPPPGATKDVLRKCATSQGVRSYSTPVGLESR 135

Query:   217 IKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVT 265
             + VDL+V+GSVAV+ K G R+GKGEG+A+LEY M+  MGA   +TPVVT
Sbjct:   136 LLVDLVVVGSVAVSEK-GWRIGKGEGYADLEYAMMVSMGAASQATPVVT 183

GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity" evidence=IEA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|H3BQU0 MTHFSD "Methenyltetrahydrofolate synthase domain-containing protein" [Homo sapiens (taxid:9606)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 82/168 (48%), Positives = 104/168 (61%)

Query:    99 IRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQ 158
             IR++IW  ME QN+A  PRPVHHRIPNF G+ +A +N+  L+ F     VKV+PD P + 
Sbjct:     7 IREQIWGYMESQNLADFPRPVHHRIPNFKGSYLACQNIKDLDVFARTQEVKVDPDKPLEG 66

Query:   159 VRXXXXXXXXXXXXPQPRLRTGFFSVLDSSMLSPSTINEAC-TSVGVAKYGKQIGLDEII 217
             VR            P PRLRTG F+ +     +   I   C TS GV  Y   IGLD  +
Sbjct:    67 VRLLVLQSKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVRNYSVPIGLDSRV 126

Query:   218 KVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVT 265
              VDL+V+GSVAV+ K G R+GKGEG+A+LEY M+  MGA+   TPVVT
Sbjct:   127 LVDLVVVGSVAVSEK-GWRIGKGEGYADLEYAMMVSMGAVSKETPVVT 173

GO:0005524 "ATP binding" evidence=IEA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity" evidence=IEA

UNIPROTKB|H3BSD1 MTHFSD "Methenyltetrahydrofolate synthase domain-containing protein" [Homo sapiens (taxid:9606)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 82/168 (48%), Positives = 104/168 (61%)

Query:    99 IRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQ 158
             IR++IW  ME QN+A  PRPVHHRIPNF G+ +A +N+  L+ F     VKV+PD P + 
Sbjct:     8 IREQIWGYMESQNLADFPRPVHHRIPNFKGSYLACQNIKDLDVFARTQEVKVDPDKPLEG 67

Query:   159 VRXXXXXXXXXXXXPQPRLRTGFFSVLDSSMLSPSTINEAC-TSVGVAKYGKQIGLDEII 217
             VR            P PRLRTG F+ +     +   I   C TS GV  Y   IGLD  +
Sbjct:    68 VRLLVLQSKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVRNYSVPIGLDSRV 127

Query:   218 KVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVT 265
              VDL+V+GSVAV+ K G R+GKGEG+A+LEY M+  MGA+   TPVVT
Sbjct:   128 LVDLVVVGSVAVSEK-GWRIGKGEGYADLEYAMMVSMGAVSKETPVVT 174

GO:0005524 "ATP binding" evidence=IEA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity" evidence=IEA

UNIPROTKB|Q2M296 MTHFSD "Methenyltetrahydrofolate synthase domain-containing protein" [Homo sapiens (taxid:9606)]

 Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
 Identities = 82/168 (48%), Positives = 104/168 (61%)

Query:    99 IRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQ 158
             IR++IW  ME QN+A  PRPVHHRIPNF G+ +A +N+  L+ F     VKV+PD P + 
Sbjct:    13 IREQIWGYMESQNLADFPRPVHHRIPNFKGSYLACQNIKDLDVFARTQEVKVDPDKPLEG 72

Query:   159 VRXXXXXXXXXXXXPQPRLRTGFFSVLDSSMLSPSTINEAC-TSVGVAKYGKQIGLDEII 217
             VR            P PRLRTG F+ +     +   I   C TS GV  Y   IGLD  +
Sbjct:    73 VRLLVLQSKKTLLVPTPRLRTGLFNKITPPPGATKDILRKCATSQGVRNYSVPIGLDSRV 132

Query:   218 KVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVT 265
              VDL+V+GSVAV+ K G R+GKGEG+A+LEY M+  MGA+   TPVVT
Sbjct:   133 LVDLVVVGSVAVSEK-GWRIGKGEGYADLEYAMMVSMGAVSKETPVVT 179

GO:0005524 "ATP binding" evidence=IEA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

ZFIN|ZDB-GENE-030131-3513 mthfsd "methenyltetrahydrofolate synthetase domain containing" [Danio rerio (taxid:7955)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 74/171 (43%), Positives = 108/171 (63%)

Query:    96 KWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSP 155
             KW +R ++W+ +EV+N+A  PRPVH+RIPNF GA  A   +  LE F  +  VKV+PD P
Sbjct:    13 KWDVRHKVWNYIEVKNLANFPRPVHNRIPNFKGALEACNKVAQLEIFIESAVVKVDPDKP 72

Query:   156 QKQVRXXXXXXXXXXXXPQPRLRTGFFS-VLDSSMLSPSTINEACTSVGVAKYGKQIGLD 214
              + VR            P PRLR G F+ +      +  T+    TS G+ ++   +GLD
Sbjct:    73 MEGVRLAALKARKSLLVPTPRLRFGLFNRITPPKGATKETLRVCSTSQGIKEFSVPVGLD 132

Query:   215 EIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVT 265
             + ++VDL+V+GSVAV+ K G R+GKGEGFA++EY M+  MG++ +ST V+T
Sbjct:   133 DKVQVDLVVVGSVAVSEK-GYRIGKGEGFADMEYAMMACMGSVTESTWVIT 182

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity" evidence=IEA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0003723 "RNA binding" evidence=IEA

UNIPROTKB|E1C7K5 MTHFSD "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 72/168 (42%), Positives = 106/168 (63%)

Query:    99 IRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQ 158
             IR+++WD +E   +A+ PRPVHHRIPNF G+  A  ++  L+ F  A  +KV+PD P + 
Sbjct:    16 IREKVWDYLEASGLAEFPRPVHHRIPNFKGSHQACCSIKELDVFNRASEIKVDPDKPLEG 75

Query:   159 VRXXXXXXXXXXXXPQPRLRTGFFS-VLDSSMLSPSTINEACTSVGVAKYGKQIGLDEII 217
             VR            P PRLR+G F+ ++     +  T+    TS G+ +Y   +GLD   
Sbjct:    76 VRLAALQARKTLLVPTPRLRSGLFNKIVPPPGATKETLRICATSQGIKEYSVPVGLDGKA 135

Query:   218 KVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVT 265
             +VDL+V+GSVAV+ K G R+GKGEG+A++EY M+  MGA+ + TPV+T
Sbjct:   136 RVDLVVVGSVAVSEK-GWRIGKGEGYADMEYAMMVSMGAVTEDTPVIT 182

GO:0005524 "ATP binding" evidence=IEA

GO:0009396 "folic acid-containing compound biosynthetic process" evidence=IEA

GO:0030272 "5-formyltetrahydrofolate cyclo-ligase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00031739001	SubName- Full=Chromosome chr18 scaffold_59, whole genome shotgun sequence; (351 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00011727001	SubName- Full=Chromosome undetermined scaffold_332, whole genome shotgun sequence; (300 aa)						•			0.899
	GSVIVG00000050001	SubName- Full=Chromosome chr17 scaffold_101, whole genome shotgun sequence; (287 aa)						•			0.800
	GSVIVG00030205001	SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (404 aa)				•					0.438
	GSVIVG00017873001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (362 aa)	•								0.437
	GSVIVG00035470001	SubName- Full=Chromosome chr12 scaffold_78, whole genome shotgun sequence; (497 aa)	•								0.421

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	295
pfam01812	182	pfam01812, 5-FTHF_cyc-lig, 5-formyltetrahydrofolat	2e-29
COG0212	191	COG0212, COG0212, 5-formyltetrahydrofolate cyclo-l	2e-19

>gnl|CDD|216717 pfam01812, 5-FTHF_cyc-lig, 5-formyltetrahydrofolate cyclo-ligase family

 Score =  109 bits (275), Expect = 2e-29
 Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 21/174 (12%)

Query: 96  KWIIRKRI---WDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNP 152
           K  +RK++      +  +  A   R +H ++P+FVGA  A          RVA  V V  
Sbjct: 1   KQELRKQLLAKRRALSEEERAAASRALHQKLPSFVGAQKAK---------RVALYVSVKG 51

Query: 153 DSPQKQVRLLTLSGGKKLLTPQPRLRTGFFSVLDSSMLSPSTINEAC-TSVGVAKYGKQI 211
           +   +++  L L  GK +L P+PR  +G    +          +        + +  +++
Sbjct: 52  EIDTRELIELLLEEGKLVLLPRPRPDSGLVVRITPYYPETGLPSGPYGLPEPIEEEQREL 111

Query: 212 GLDEIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVT 265
            L+   ++DL+++  VA + + G RLG+G G+ +     L+  G       V  
Sbjct: 112 ALN---QIDLVLVPGVAFD-RQGYRLGRGGGYYDRYLARLQGHG----PLTVGL 157

5-formyltetrahydrofolate cyclo-ligase or methenyl-THF synthetase EC:6.3.3.2 catalyzes the interchange of 5-formyltetrahydrofolate (5-FTHF) to 5-10-methenyltetrahydrofolate, this requires ATP and Mg2+. 5-FTHF is used in chemotherapy where it is clinically known as Leucovorin. Length = 182

>gnl|CDD|223290 COG0212, COG0212, 5-formyltetrahydrofolate cyclo-ligase [Coenzyme metabolism]

 Score = 83.5 bits (207), Expect = 2e-19
 Identities = 41/168 (24%), Positives = 68/168 (40%), Gaps = 14/168 (8%)

Query: 99  IRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQ 158
            +  +  L+  + IA +P   H        A + A  +   +   +A  V  N +   + 
Sbjct: 4   TKSALRKLLLERRIALSPEERHEADQR--IAKLLASLIEVKKAKTIALYVPFNGEIDTRP 61

Query: 159 VRLLTLSGGKKLLTPQPRLRTGFFSVLDSSMLSPSTINEACTSVGVAKYGKQIGLDEIIK 218
           +    L  GK+LL P+ R     F       L P   N     +   +YG++I   EI  
Sbjct: 62  LIRQALRRGKRLLLPKLRDYKLLFLRYIPDPLQPLIKN-RFGILEPGEYGRKIPPPEI-- 118

Query: 219 VDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDD-STPVVT 265
            DL+++  VA + + G RLG G G+ +      RY+  +    TP V 
Sbjct: 119 -DLVLVPLVAFDKQ-GYRLGYGGGYYD------RYLANLRGRKTPTVG 158

Length = 191

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	295
PF01812	186	5-FTHF_cyc-lig: 5-formyltetrahydrofolate cyclo-lig	100.0
TIGR02727	181	MTHFS_bact 5,10-methenyltetrahydrofolate synthetas	100.0
PLN02812	211	5-formyltetrahydrofolate cyclo-ligase	100.0
PRK10333	182	5-formyltetrahydrofolate cyclo-ligase family prote	100.0
KOG4410	396	consensus 5-formyltetrahydrofolate cyclo-ligase [C	100.0
COG0212	191	5-formyltetrahydrofolate cyclo-ligase [Coenzyme me	100.0
KOG3093	200	consensus 5-formyltetrahydrofolate cyclo-ligase [C	100.0

>PF01812 5-FTHF_cyc-lig: 5-formyltetrahydrofolate cyclo-ligase family; InterPro: IPR002698 5-formyltetrahydrofolate cyclo-ligase or methenyl-THF synthetase 6

Probab=100.00  E-value=2.7e-38  Score=277.38  Aligned_cols=169  Identities=19%  Similarity=0.176  Sum_probs=122.1

Q ss_pred             HHHHHHHHHHHHHhcccccCCCccccCCCCHHHHHHHHHHHhcChhhhcccEEEEeC----CCCcHHHHHHHHHCCCEEE
Q 022559           96 KWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNP----DSPQKQVRLLTLSGGKKLL  171 (295)
Q Consensus        96 Kk~LRk~i~~~r~~~~~~~~~~~~~~r~p~f~~S~~I~~~L~~l~~~~~Ak~I~vy~----e~~t~~li~~al~~GK~V~  171 (295)
                      |++||++++++|++++...     ..     ..|..|+++|.+++.|++|++|++|.    |++|.++++.+++.||+|+
T Consensus         1 K~~lR~~~~~~r~~l~~~~-----~~-----~~s~~i~~~l~~~~~~~~a~~I~~y~~~~~Ev~t~~li~~~~~~gk~v~   70 (186)
T PF01812_consen    1 KKELRKEIRARRRALSPEE-----RA-----EASQAICERLLALPEYRKAQTIALYLPMGGEVDTRPLIERALKDGKRVY   70 (186)
T ss_dssp             HHHHHHHHHHHHHTS-HHH-----HH-----HHHHHHHHHHHCCHHHHCTSEEEE----TTS---HHHHHHHHHTTCEEE
T ss_pred             CHHHHHHHHHHHHcCCHHH-----HH-----HHHHHHHHHHHhChhhhhhceEEEccCCCCCCCHHHHHHHHHHcCCeEe
Confidence            8999999999999987642     11     47899999999999999999999996    5789999999999999999


Q ss_pred             EceecCCCC---c--EEeeCC-CCCCCcccccccccCCccccccccCCCC----CccccEEEEccceeeCCCCCeeecCC
Q 022559          172 TPQPRLRTG---F--FSVLDS-SMLSPSTINEACTSVGVAKYGKQIGLDE----IIKVDLIVIGSVAVNPKTGARLGKGE  241 (295)
Q Consensus       172 lP~~~~~~~---~--~~~~~~-~~l~~g~l~~~~~~~G~~~~geP~~~~~----~~~iDLIIVPgvAFD~~~G~RLGyGg  241 (295)
                      +|++....+   +  |..+.. +.+          ..|.+++.||.....    ..++|||||||||||+ +|+||||||
T Consensus        71 lP~~~~~~~~~~~~~~~~~~~~~~l----------~~~~~gI~EP~~~~~~~~~~~~idlvlVP~lafd~-~G~RLG~Gg  139 (186)
T PF01812_consen   71 LPRVHPDDGRMRMMEFRRYDSDDPL----------EKGRFGIPEPDGESPPPDPPEEIDLVLVPGLAFDR-NGNRLGYGG  139 (186)
T ss_dssp             EEEEETTCTEECEEEEEEESSCGCC----------EECETTCEEEESTCSEEGGGGG-SEEEEE-SEEET-TSBEE-SSS
T ss_pred             cceecccccccceeEEeecCCcccc----------cccccCccCCccccccccccccCCEEEeCcEEECC-CCCeEecCC
Confidence            999865442   2  223332 222          246677778865431    2389999999999999 999999999


Q ss_pred             chhhhhhhhhhhcCCCCCCCCEEEEEcCccccCCCCC---cccccEEEEE
Q 022559          242 GFAELEYGMLRYMGAIDDSTPVVTSGKCGFCRIFLPL---FYLVLFILFV  288 (295)
Q Consensus       242 GYYDRfLa~l~~~~~~~~~~~~Vgla~d~Qvvd~LP~---D~~vd~Ii~~  288 (295)
                      |||||||+.+..   ....+.+||+||++|+++.||.   |++||.||++
T Consensus       140 GyYDR~L~~~~~---~~~~~~~igl~~~~q~~~~iP~e~hD~~ld~iiTe  186 (186)
T PF01812_consen  140 GYYDRFLARLPP---GRKKPLKIGLAFDFQIVDDIPVEPHDIPLDAIITE  186 (186)
T ss_dssp             THHHHHHHHHTS----SS--EEEEEE-GGGEES-----TTS-B-SEEEET
T ss_pred             CHHHhHHHhhhc---ccCCCeEEEEeehhheeCCCCCCcccccCCEEEcC
Confidence            999999998864   1235678999999999999996   7999999974

3.3.2 from EC catalyses the interchange of 5-formyltetrahydrofolate (5-FTHF) to 5-10-methenyltetrahydrofolate, this requires ATP and Mg2+ []. 5-FTHF is used in chemotherapy where it is clinically known as Leucovorin [].; GO: 0005524 ATP binding, 0030272 5-formyltetrahydrofolate cyclo-ligase activity, 0009396 folic acid-containing compound biosynthetic process; PDB: 1WKC_A 1SBQ_A 1U3G_A 1U3F_B 1YDM_B 1SOU_A 2JCB_B 3HY6_A 3HY4_A 3HXT_A ....

>TIGR02727 MTHFS_bact 5,10-methenyltetrahydrofolate synthetase

Probab=100.00  E-value=4.3e-37  Score=269.81  Aligned_cols=166  Identities=23%  Similarity=0.208  Sum_probs=134.0

Q ss_pred             HHHHHHHHHHHHHhcccccCCCccccCCCCHHHHHHHHHHHhcChhhhcccEEEEeC----CCCcHHHHHHHHHCCCEEE
Q 022559           96 KWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNP----DSPQKQVRLLTLSGGKKLL  171 (295)
Q Consensus        96 Kk~LRk~i~~~r~~~~~~~~~~~~~~r~p~f~~S~~I~~~L~~l~~~~~Ak~I~vy~----e~~t~~li~~al~~GK~V~  171 (295)
                      |++||++++++|++++.+.     ..     ..|..++++|.+++.|+++++|++|+    |++|.++++.+++.||+|+
T Consensus         1 K~~lR~~~~~~r~~l~~~~-----~~-----~~~~~i~~~l~~~~~~~~~~~I~~Y~~~~~E~~t~~li~~~~~~~k~v~   70 (181)
T TIGR02727         1 KKELRKKLLERRKALSSEE-----RK-----AASEAIAKRLLALIEWKNAKTIALYLPLRGEVDTRPLIEQLLKEGKRVA   70 (181)
T ss_pred             CHHHHHHHHHHHHcCCHHH-----HH-----HHHHHHHHHHHhChhhhcCCEEEEEcCCCCCcCHHHHHHHHHHCCCEEE
Confidence            6899999999998876642     11     47999999999999999999999996    5689999999999999999


Q ss_pred             EceecCCC--C-cEEeeCCC-CCCCcccccccccCCccccccccCC----CCCccccEEEEccceeeCCCCCeeecCCch
Q 022559          172 TPQPRLRT--G-FFSVLDSS-MLSPSTINEACTSVGVAKYGKQIGL----DEIIKVDLIVIGSVAVNPKTGARLGKGEGF  243 (295)
Q Consensus       172 lP~~~~~~--~-~~~~~~~~-~l~~g~l~~~~~~~G~~~~geP~~~----~~~~~iDLIIVPgvAFD~~~G~RLGyGgGY  243 (295)
                      ||++....  . +|..++++ .+.          .|.+++.||...    ....++|||||||||||+ +|+||||||||
T Consensus        71 lP~~~~~~~~~~~~~~~~~~~~l~----------~~~~gi~eP~~~~~~~~~~~~idlvivP~lafD~-~G~RLG~GgGy  139 (181)
T TIGR02727        71 LPKVDPDGKEMLFFRIWSPSDLLT----------KGKFGILEPPGDSTEPVDPDEIDLIIVPGVAFDR-RGYRLGYGGGY  139 (181)
T ss_pred             EEEEecCCCceeEEEecCCCCccc----------cCCCCCCCCCCcccCcCCcccCCEEEeCceEEcC-CCccccCCcch
Confidence            99985433  2 24345543 332          355666677532    235678999999999999 99999999999


Q ss_pred             hhhhhhhhhhcCCCCCCCCEEEEEcCccccCCCCC---cccccEEEEE
Q 022559          244 AELEYGMLRYMGAIDDSTPVVTSGKCGFCRIFLPL---FYLVLFILFV  288 (295)
Q Consensus       244 YDRfLa~l~~~~~~~~~~~~Vgla~d~Qvvd~LP~---D~~vd~Ii~~  288 (295)
                      |||||+.++.      .+++||+||++|+++.+|+   |++||.||++
T Consensus       140 YDR~L~~~~~------~~~~igv~~~~q~~~~lp~e~~Di~ld~iiTe  181 (181)
T TIGR02727       140 YDRFLANLKG------KTVVVGLAFDFQLVDELPREPHDVPVDAIITE  181 (181)
T ss_pred             HHHHHHhccc------CCCEEEEEecceeeCccCCCccCccCCEEeCC
Confidence            9999997542      3448999999999999997   7999999863

This enzyme, 5,10-methenyltetrahydrofolate synthetase, is also called 5-formyltetrahydrofolate cycloligase. Function of bacterial proteins in this family was inferred originally from the known activity of eukaryotic homologs. Recently, activity was shown explicitly for the member from Mycoplasma pneumonia. Members of this family from alpha- and gamma-proteobacteria, designated ygfA, are often found in an operon with 6S structural RNA, and show a similar pattern of high expression during stationary phase. The function may be to deplete folate to slow 1-carbon biosynthetic metabolism.

>PLN02812 5-formyltetrahydrofolate cyclo-ligase

Probab=100.00  E-value=1e-36  Score=274.15  Aligned_cols=176  Identities=15%  Similarity=0.135  Sum_probs=137.8

Q ss_pred             chhHHHHHHHHHHHHHHhcccccCCCccccCCCCHHHHHHHHHHHhcChhhhcccEEEEeC------CCCcHHHHHHHHH
Q 022559           92 PKSWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNP------DSPQKQVRLLTLS  165 (295)
Q Consensus        92 ~~~~Kk~LRk~i~~~r~~~~~~~~~~~~~~r~p~f~~S~~I~~~L~~l~~~~~Ak~I~vy~------e~~t~~li~~al~  165 (295)
                      ..+.|++||++++++|+.++.+.     .     ...|..|+++|.+++.|++|++|++|+      |++|.++++.+++
T Consensus         3 ~~~~K~~lR~~~~~~R~~l~~~~-----~-----~~~s~~i~~~l~~~~~~~~a~~I~~Y~~~~~~~Evdt~~li~~~~~   72 (211)
T PLN02812          3 IREQKKALRKEVRRALKALSPEQ-----R-----AQEDAAIQSRLLELPWFKSSKRLCAYVSCAKLREVDTSKILSEILQ   72 (211)
T ss_pred             HHHHHHHHHHHHHHHHHcCCHHH-----H-----HHHHHHHHHHHHcChhhHhcCEEEEEEECCCCCCcCHHHHHHHHHH
Confidence            35689999999999998876531     1     147999999999999999999999993      6778999999999


Q ss_pred             CC-CEEEEceecCCCC-c-EEeeCC--CCCCCcccccccccCCccccccccCCC-----------CCccccEEEEcccee
Q 022559          166 GG-KKLLTPQPRLRTG-F-FSVLDS--SMLSPSTINEACTSVGVAKYGKQIGLD-----------EIIKVDLIVIGSVAV  229 (295)
Q Consensus       166 ~G-K~V~lP~~~~~~~-~-~~~~~~--~~l~~g~l~~~~~~~G~~~~geP~~~~-----------~~~~iDLIIVPgvAF  229 (295)
                      .| |+|++|++..... + |..+.+  +.+.          .|.+++.||....           ...++||||||||||
T Consensus        73 ~g~k~v~lP~~~~~~~~m~f~~~~~~~~~l~----------~~~~gI~EP~~~~~~~~~~~~~~~~~~~iDliiVP~laf  142 (211)
T PLN02812         73 NPDKRLYVPRVEDKNSNMRMLHITDMADDLV----------ANSMNILEPTPVDADGNPREDVLQAPEPLDLLLLPGLAF  142 (211)
T ss_pred             cCCcEEEEeEEecCCCeEEEEEeCCcccccc----------CCCCCccCCCccccccccccccccCCCCCCEEEeCceEE
Confidence            99 9999999753322 3 445543  2332          4666777775321           246789999999999


Q ss_pred             eCCCCCeeecCCchhhhhhhhhhhc--CCCCCCCCEEEEEcCccccC--CCCC---cccccEEEEE
Q 022559          230 NPKTGARLGKGEGFAELEYGMLRYM--GAIDDSTPVVTSGKCGFCRI--FLPL---FYLVLFILFV  288 (295)
Q Consensus       230 D~~~G~RLGyGgGYYDRfLa~l~~~--~~~~~~~~~Vgla~d~Qvvd--~LP~---D~~vd~Ii~~  288 (295)
                      |. +|+|||||||||||||+.++..  ......+.+|||||++|+++  .||.   |++||.||++
T Consensus       143 D~-~G~RLG~GgGyYDR~L~~~~~~~~~~~~~~~~~igla~~~Q~~~~~~iP~e~hD~~ld~iiTe  207 (211)
T PLN02812        143 DR-SGRRLGRGGGYYDTFLSKYQELAKEKGWKQPLLVALSYSPQILDEGSVPVDETDVLVDALVTP  207 (211)
T ss_pred             CC-CCCcCcCCCchHHHHHHHhhhhhccccCCCceEEEEeeheeeECCCCCCCccccccCCEEEcC
Confidence            99 9999999999999999987421  00001345899999999999  9996   7999999985

>PRK10333 5-formyltetrahydrofolate cyclo-ligase family protein; Provisional

Probab=100.00  E-value=8.6e-36  Score=262.52  Aligned_cols=146  Identities=18%  Similarity=0.116  Sum_probs=119.0

Q ss_pred             HHHHHHHHHHhcChhhhcccEEEEeC----CCCcHHHHHHHHHCCCEEEEceecCC-CC-c-EEeeCC-CCCCCcccccc
Q 022559          127 VGASVAAKNLTGLEEFRVAGCVKVNP----DSPQKQVRLLTLSGGKKLLTPQPRLR-TG-F-FSVLDS-SMLSPSTINEA  198 (295)
Q Consensus       127 ~~S~~I~~~L~~l~~~~~Ak~I~vy~----e~~t~~li~~al~~GK~V~lP~~~~~-~~-~-~~~~~~-~~l~~g~l~~~  198 (295)
                      ..|++|+++|.+++.|++|++|++|+    |++|.++++.+++.||+|++|++... .+ + |..+.+ +.+.       
T Consensus        16 ~~s~~i~~~l~~~~~~~~a~~I~~Y~~~~~Evdt~~li~~~~~~gk~v~lP~v~~~~~~~m~f~~~~~~~~l~-------   88 (182)
T PRK10333         16 EMGQQAATRMMTYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLNYHPQSELV-------   88 (182)
T ss_pred             HHHHHHHHHHHhChhhhcCCEEEEEcCCCCCcCHHHHHHHHHHCCCEEEEeEEecCCCCEEEEEECCCCCccc-------
Confidence            47999999999999999999999996    56899999999999999999997532 12 2 434443 3332       


Q ss_pred             cccCCccccccccCC----CCCccccEEEEccceeeCCCCCeeecCCchhhhhhhhhhhcCCCCCCCCEEEEEcCccccC
Q 022559          199 CTSVGVAKYGKQIGL----DEIIKVDLIVIGSVAVNPKTGARLGKGEGFAELEYGMLRYMGAIDDSTPVVTSGKCGFCRI  274 (295)
Q Consensus       199 ~~~~G~~~~geP~~~----~~~~~iDLIIVPgvAFD~~~G~RLGyGgGYYDRfLa~l~~~~~~~~~~~~Vgla~d~Qvvd  274 (295)
                         .|.+++.||...    .....+|||||||||||+ +|+|||||||||||||+.++..     .+.+||+||++|+++
T Consensus        89 ---~~~~gI~EP~~~~~~~~~~~~iDlviVP~laFD~-~G~RLG~GgGyYDR~L~~~~~~-----~~~~igla~~~Q~~~  159 (182)
T PRK10333         89 ---MNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDE-YGQRLGMGGGFYDRTLQNWQHY-----KTQPVGYAHDCQLVE  159 (182)
T ss_pred             ---cCCCCCCCCCccccccCCcccCCEEEeCceEECC-CCCcccCCcchHHHHHHHhccc-----CCcEEEEeeeeEEeC
Confidence               466677777532    235678999999999999 9999999999999999976421     245799999999999


Q ss_pred             CCCC---cccccEEEEE
Q 022559          275 FLPL---FYLVLFILFV  288 (295)
Q Consensus       275 ~LP~---D~~vd~Ii~~  288 (295)
                      +||.   |++||.||++
T Consensus       160 ~ip~e~hD~~ld~iiTe  176 (182)
T PRK10333        160 KLPVEEWDIPLPAVVTP  176 (182)
T ss_pred             CcCCCcccCcCCEEEeC
Confidence            9997   7999999984

>KOG4410 consensus 5-formyltetrahydrofolate cyclo-ligase [Coenzyme transport and metabolism]

Probab=100.00  E-value=8.4e-36  Score=274.42  Aligned_cols=205  Identities=50%  Similarity=0.686  Sum_probs=184.9

Q ss_pred             hccCCCC-CchhHHHHHHHHHHHHHHhcccccCCCccccCCCCHHHHHHHHHHHhcChhhhcccEEEEeCCCCcHHHHHH
Q 022559           84 TESGAED-DPKSWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPDSPQKQVRLL  162 (295)
Q Consensus        84 ~~~~~~~-~~~~~Kk~LRk~i~~~r~~~~~~~~~~~~~~r~p~f~~S~~I~~~L~~l~~~~~Ak~I~vy~e~~t~~li~~  162 (295)
                      ++++|++ ++..+|+.||.++|..+++.+.+..|+++|+|||||.++.++|+.+.++++|+.|+.|.++++-+++.+.+.
T Consensus        21 ~~~~s~~qd~~~~k~~iR~q~W~~me~~n~a~~prpvhhRIPnFvGa~~Aa~~~a~ld~F~~Aq~vKVnpD~pl~~~r~L  100 (396)
T KOG4410|consen   21 QEVSSTTQDIEPTKRSIRVQTWKKMEEGNVAIGPRPVHHRIPNFVGADKAAALFANLDEFKKAQHVKVNPDRPLHEFREL  100 (396)
T ss_pred             ccccCCCCCcchhHHHHHHHHHHHHhhcccccCCcchhhcCccccchHHHHHHhhhhHHHhhcceeecCCCchHHHHHHH
Confidence            3444554 679999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHCCCEEEEceecCCCCcEEeeCCCCCCCccccccc-ccCCccccccccCCCCCccccEEEEccceeeCCCCCeeecCC
Q 022559          163 TLSGGKKLLTPQPRLRTGFFSVLDSSMLSPSTINEAC-TSVGVAKYGKQIGLDEIIKVDLIVIGSVAVNPKTGARLGKGE  241 (295)
Q Consensus       163 al~~GK~V~lP~~~~~~~~~~~~~~~~l~~g~l~~~~-~~~G~~~~geP~~~~~~~~iDLIIVPgvAFD~~~G~RLGyGg  241 (295)
                      +|...|+|++|.+++++++|..++.......++...| ++.|..+|+.++++++..++|||||++||+.+ .|+|||+|.
T Consensus       101 ~L~~~Ksll~PspRlrtglf~kv~~~~~ate~i~~~c~tsqgv~ky~~~IGLDs~lkvDlvViGSVavs~-~G~RiGkGe  179 (396)
T KOG4410|consen  101 ALLADKSLLLPSPRLRTGLFLKVDVLADATEEIKKECLTSQGVQKYRSEIGLDSGLKVDLVVIGSVAVSR-EGYRIGKGE  179 (396)
T ss_pred             HhhcccceecCCchhhcceeeeeccCCCCcHHHHHHHHhhhhHHHhCcccccccCceEEEEEEeeEEecc-cceeeccCC
Confidence            9999999999999988898866665444433444444 77899899999998888899999999999999 999999999


Q ss_pred             chhhhhhhhhhhcCCCCCCCCEEEEEcCccccCCCCC------cccccEEEEEE
Q 022559          242 GFAELEYGMLRYMGAIDDSTPVVTSGKCGFCRIFLPL------FYLVLFILFVY  289 (295)
Q Consensus       242 GYYDRfLa~l~~~~~~~~~~~~Vgla~d~Qvvd~LP~------D~~vd~Ii~~~  289 (295)
                      ||.|..+++|..||++++++++|+++||||+||+||.      |++||+|..+-
T Consensus       180 GfAdLeygmli~mGAi~~~TpvVTiVHDcQvVD~iP~el~~~hD~pVDiI~TPT  233 (396)
T KOG4410|consen  180 GFADLEYGMLIEMGAITPKTPVVTIVHDCQVVDSIPPELFQKHDTPVDIIATPT  233 (396)
T ss_pred             chhhhhhHHHHHhcccCCCCceEEEEecceeeccCCHHHHhhcCCCccEEeccc
Confidence            9999999999999999999999999999999999995      79999998743

>COG0212 5-formyltetrahydrofolate cyclo-ligase [Coenzyme metabolism]

Probab=100.00  E-value=7.4e-35  Score=258.63  Aligned_cols=173  Identities=21%  Similarity=0.129  Sum_probs=135.8

Q ss_pred             hhHHHHHHHHHHHHHHhcccccCCCccccCCCCHHHHHHHHHHHhcChhhhcccEEEEeC----CCCcHHHHHHHHHCCC
Q 022559           93 KSWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNP----DSPQKQVRLLTLSGGK  168 (295)
Q Consensus        93 ~~~Kk~LRk~i~~~r~~~~~~~~~~~~~~r~p~f~~S~~I~~~L~~l~~~~~Ak~I~vy~----e~~t~~li~~al~~GK  168 (295)
                      .+.|++||+++++.|.+++...    .+      ..+..+++++..++.+..+++|++|+    |+++.++++.+|++||
T Consensus         2 ~~~K~~lR~~~~~~r~~l~~~~----~~------~~~~~i~~~~~~~~~~~~~~~ia~y~~~~~E~~~~~l~~~~l~~gk   71 (191)
T COG0212           2 MATKSALRKLLLERRIALSPEE----RH------EADQRIAKLLASLIEVKKAKTIALYVPFNGEIDTRPLIRQALRRGK   71 (191)
T ss_pred             chHHHHHHHHHHHHHHcCCHHH----HH------HHHHHHHHHHHhccccccccEEEEEeccCCCCCcHHHHHHHHHcCC
Confidence            4689999999999998876541    12      36777999999999999999999996    5678999999999999


Q ss_pred             EEEEceecCCCCcEEeeCCCCCCCcccccccccCCccccccccCCC---CCccccEEEEccceeeCCCCCeeecCCchhh
Q 022559          169 KLLTPQPRLRTGFFSVLDSSMLSPSTINEACTSVGVAKYGKQIGLD---EIIKVDLIVIGSVAVNPKTGARLGKGEGFAE  245 (295)
Q Consensus       169 ~V~lP~~~~~~~~~~~~~~~~l~~g~l~~~~~~~G~~~~geP~~~~---~~~~iDLIIVPgvAFD~~~G~RLGyGgGYYD  245 (295)
                      +|++|++......|..+.++. . ..     ...+.+++.+|....   ....+|||||||||||+ +|+||||||||||
T Consensus        72 ~l~lP~~~~~~~~f~~~~~~~-~-~~-----~~~~~~gi~eP~~~~~~~~~~~iDlvlvP~Vafd~-~G~RLG~GgGyYD  143 (191)
T COG0212          72 RLLLPKLRDYKLLFLRYIPDP-L-QP-----LIKNRFGILEPGEYGRKIPPPEIDLVLVPLVAFDK-QGYRLGYGGGYYD  143 (191)
T ss_pred             EEEEeEEEcCcceeEEecCCC-C-cc-----cccccccccCCCccCCccCCCcCCEEEeCceeECC-CCccccCCCchHH
Confidence            999999863222343555442 1 00     113345555664321   12678999999999999 9999999999999


Q ss_pred             hhhhhhhhcCCCCCCCCEEEEEcCccccCCCCC---cccccEEEEE
Q 022559          246 LEYGMLRYMGAIDDSTPVVTSGKCGFCRIFLPL---FYLVLFILFV  288 (295)
Q Consensus       246 RfLa~l~~~~~~~~~~~~Vgla~d~Qvvd~LP~---D~~vd~Ii~~  288 (295)
                      |||+.+.     ..++.+||+||+||+++.+|.   |++||.||++
T Consensus       144 R~la~~~-----~~~~~~ig~~~~~Q~v~~lP~e~hDv~ld~ivt~  184 (191)
T COG0212         144 RYLANLR-----GRKTPTVGIAYDCQLVDHLPREPHDVPLDAIVTE  184 (191)
T ss_pred             HHHHhhc-----cCCCCEEEEEEeeeeeccCCCCcccCcccEEEeC
Confidence            9999775     135788999999999999986   7999999983

>KOG3093 consensus 5-formyltetrahydrofolate cyclo-ligase [Coenzyme transport and metabolism]

Probab=100.00  E-value=3.6e-34  Score=249.67  Aligned_cols=176  Identities=14%  Similarity=0.156  Sum_probs=136.3

Q ss_pred             chhHHHHHHHHHHHHHHhcccccCCCccccCCCCHHHHHHHHHHHhcChhhhcccEEEEeCC-----CCcHHHHHHHHHC
Q 022559           92 PKSWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNPD-----SPQKQVRLLTLSG  166 (295)
Q Consensus        92 ~~~~Kk~LRk~i~~~r~~~~~~~~~~~~~~r~p~f~~S~~I~~~L~~l~~~~~Ak~I~vy~e-----~~t~~li~~al~~  166 (295)
                      ..+.|..||+++++.|++++.+.     ..     .+|..|+++++++++|++++.|++|++     ++|..||..+++.
T Consensus         4 i~~~K~~LR~~lk~~L~ald~e~-----i~-----rQs~ai~~kV~e~~~fk~skrvs~YmSm~~~Ev~T~~Ii~~~fq~   73 (200)
T KOG3093|consen    4 ISATKRLLRRQLKRSLGALDAEI-----IA-----RQSEAISKKVLELPWFKNSKRVSIYMSMDKGEVDTGEIIKEAFQD   73 (200)
T ss_pred             HHHHHHHHHHHHHHHHhccCHHH-----HH-----HHHHHHHHHHHhhHHHHhcCceEEEEecCcccccHHHHHHHHHhc
Confidence            35679999999999999998752     22     489999999999999999999999974     5689999999999


Q ss_pred             CCEEEEceecCCCC-c-EEee-CCCCCCCcccccccccCCcccccccc--CCC-------CCccccEEEEccceeeCCCC
Q 022559          167 GKKLLTPQPRLRTG-F-FSVL-DSSMLSPSTINEACTSVGVAKYGKQI--GLD-------EIIKVDLIVIGSVAVNPKTG  234 (295)
Q Consensus       167 GK~V~lP~~~~~~~-~-~~~~-~~~~l~~g~l~~~~~~~G~~~~geP~--~~~-------~~~~iDLIIVPgvAFD~~~G  234 (295)
                      ||.||+|++....+ + +..+ +.+.+..         -....|++|.  +..       ....+|||||||||||+ .|
T Consensus        74 gK~vFiP~~~~~~s~m~Mvr~~~~e~~~~---------l~~t~w~i~qp~~~~~re~~~~t~~~lDLiivPGvAFd~-~g  143 (200)
T KOG3093|consen   74 GKEVFIPRCTHTSSKMDMVRIDHMEELES---------LPMTSWGIRQPKPGGPREDALETGHPLDLIIVPGVAFDR-KG  143 (200)
T ss_pred             CCeEEeeeeecCCCceeEEEeCChHHHhh---------CcccccCCCCCCCCCchhhhccCCCcceEEEecccccch-hh
Confidence            99999999853332 2 3233 2232221         0112334433  211       12359999999999999 99


Q ss_pred             CeeecCCchhhhhhhhhhhcCCCCCCCCEEEEEcCccccCCCCC---cccccEEEEE
Q 022559          235 ARLGKGEGFAELEYGMLRYMGAIDDSTPVVTSGKCGFCRIFLPL---FYLVLFILFV  288 (295)
Q Consensus       235 ~RLGyGgGYYDRfLa~l~~~~~~~~~~~~Vgla~d~Qvvd~LP~---D~~vd~Ii~~  288 (295)
                      .|||+|+||||+||.++..... ..++.+||||+.+|++.+||+   |+.+|.||++
T Consensus       144 ~RlGhGkGYYD~flkry~~~~~-~~kp~~vgL~l~EQI~~~IPv~~~Dv~lD~vvt~  199 (200)
T KOG3093|consen  144 ARLGHGKGYYDDFLKRYQIHAP-EQKPLLVGLCLKEQILSEIPVEEHDVKLDAVVTE  199 (200)
T ss_pred             hhccCCcchHHHHHHHHHHhcc-ccCchhhhhhhhHhhcccCCCCccceeeeEeecC
Confidence            9999999999999998876422 346778999999999999997   7999999974

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	295
3hy3_A	203	5-formyltetrahydrofolate cyclo-ligase; antifolate,	100.0
1ydm_A	187	Hypothetical protein YQGN; northeast structural ge	100.0
2jcb_A	200	5-formyltetrahydrofolate cyclo-ligase family PROT;	100.0
1sou_A	194	5,10-methenyltetrahydrofolate synthetase; structur	100.0
1wkc_A	184	HB8 TT1367 protein; structural genomics, riken str	100.0
1sbq_A	189	H91_ORF164, 5,10-methenyltetrahydrofolate syntheta	100.0

>3hy3_A 5-formyltetrahydrofolate cyclo-ligase; antifolate, cancer, ATP-binding, binding, magnesium, nucleotide-binding; HET: 10F; 1.80A {Homo sapiens} PDB: 3hxt_A* 3hy4_A* 3hy6_A

Probab=100.00  E-value=1.6e-39  Score=288.99  Aligned_cols=178  Identities=13%  Similarity=0.132  Sum_probs=139.4

Q ss_pred             chhHHHHHHHHHHHHHHhcccccCCCccccCCCCHHHHHHHHHHHhcChhhhcccEEEEeC----CCCcHHHHHHHHHCC
Q 022559           92 PKSWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNP----DSPQKQVRLLTLSGG  167 (295)
Q Consensus        92 ~~~~Kk~LRk~i~~~r~~~~~~~~~~~~~~r~p~f~~S~~I~~~L~~l~~~~~Ak~I~vy~----e~~t~~li~~al~~G  167 (295)
                      ..+.|++||++++++|++++.+.     ..     ..|..|+++|.+++.|++|++|++|+    |++|.+|++.+++.|
T Consensus         6 ~~~~K~~LR~~~~~~R~~l~~~~-----~~-----~~s~~i~~~l~~~~~~~~a~~I~~Y~~~~~Evdt~~li~~~~~~g   75 (203)
T 3hy3_A            6 VSSAKRSLRGELKQRLRAMSAEE-----RL-----RQSRVLSQKVIAHSEYQKSKRISIFLSMQDEIETEEIIKDIFQRG   75 (203)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCHHH-----HH-----HHHHHHHHHHHTCHHHHHCSEEECCCCCTTSCCCHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHCCCHHH-----HH-----HHHHHHHHHHHhCHhhhcCCEEEEEcCCCCCcCHHHHHHHHHHCC
Confidence            35689999999999999887642     11     47999999999999999999999996    568999999999999


Q ss_pred             CEEEEceecCCCC-c-EEeeCC-CCCCCcccccccccCCccccccccCCC------CCccccEEEEccceeeCCCCCeee
Q 022559          168 KKLLTPQPRLRTG-F-FSVLDS-SMLSPSTINEACTSVGVAKYGKQIGLD------EIIKVDLIVIGSVAVNPKTGARLG  238 (295)
Q Consensus       168 K~V~lP~~~~~~~-~-~~~~~~-~~l~~g~l~~~~~~~G~~~~geP~~~~------~~~~iDLIIVPgvAFD~~~G~RLG  238 (295)
                      |+|+||++..... + |..+.. +++.       ....|.+++.||....      ...++|||||||||||+ +|+|||
T Consensus        76 k~v~lP~~~~~~~~m~~~~~~~~~~~~-------~L~~g~~GI~EP~~~~~~~~~~~~~~~DlvlVP~vaFD~-~G~RLG  147 (203)
T 3hy3_A           76 KICFIPRYRFQSNHMDMVRIESPEEIS-------LLPKTSWNIPQPGEGDVREEALSTGGLDLIFMPGLGFDK-HGNRLG  147 (203)
T ss_dssp             CEEEEEEEETTTTEEEEEEECCHHHHT-------TSCBCTTSCBCCCTTCCCCBGGGTTCCSEEEECCSEECT-TCCEEC
T ss_pred             CEEEEEEEecCCCeEEEEEeCChhhhh-------hccCCCCCCCCCCCccccccccCccCCCEEEeCCeEECC-CCceec
Confidence            9999999853322 3 434543 1111       0124666777775421      23469999999999999 999999


Q ss_pred             cCCchhhhhhhhhhhcCCCCCCCCEEEEEcCccccCCCCC---cccccEEEEEE
Q 022559          239 KGEGFAELEYGMLRYMGAIDDSTPVVTSGKCGFCRIFLPL---FYLVLFILFVY  289 (295)
Q Consensus       239 yGgGYYDRfLa~l~~~~~~~~~~~~Vgla~d~Qvvd~LP~---D~~vd~Ii~~~  289 (295)
                      ||||||||||+.+....  ...+.+||+||++|+++.||.   |++||.||++-
T Consensus       148 ~GgGyYDR~L~~~~~~~--~~~~~~igla~~~Q~~~~lP~e~hDi~ld~iiTe~  199 (203)
T 3hy3_A          148 RGKGYYDAYLKRCLQHQ--EVKPYTLALAFKEQICLQVPVNENDMKVDEVLYED  199 (203)
T ss_dssp             SSSCHHHHHHHHHTTTC--SSCCEEEEECCGGGBCSCCCCC--CCCCSEEECC-
T ss_pred             CCCchHHHHHHHhhhhc--CCCCeEEEEecHHhccCCCCCCcccccCCEEEeCC
Confidence            99999999999875321  234668999999999999997   79999999864

>1ydm_A Hypothetical protein YQGN; northeast structural genomics, SR44, X-RAY, PSI, protein structure initiative; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=1.3e-39  Score=286.23  Aligned_cols=164  Identities=18%  Similarity=0.176  Sum_probs=131.3

Q ss_pred             HHHHHHHHHHHHHHhcccccCCCccccCCCCHHHHHHHHHHHhcChhhhcccEEEEeC----CCCcHHHHHHHHHCCCEE
Q 022559           95 WKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNP----DSPQKQVRLLTLSGGKKL  170 (295)
Q Consensus        95 ~Kk~LRk~i~~~r~~~~~~~~~~~~~~r~p~f~~S~~I~~~L~~l~~~~~Ak~I~vy~----e~~t~~li~~al~~GK~V  170 (295)
                      .|++||++++++|++++.+.     .     +..|..|+++|.+++.|++|++|++|+    |++|.++++.+|++||+|
T Consensus         1 ~K~~lR~~~~~~r~~l~~~~-----~-----~~~s~~i~~~l~~~~~~~~a~~I~~y~~~~~Evdt~~li~~~~~~gk~v   70 (187)
T 1ydm_A            1 MKSQLRKKTLEALSALSNED-----I-----LQKTERMYKYLFSLPEWQNAGTIAVTISRGLEIPTRPVIEQAWEEGKQV   70 (187)
T ss_dssp             ---CHHHHHHHHHHHSCHHH-----H-----HHHHHHHHHHHHTSHHHHTCSEEECCCCCTTSCCCHHHHHHHHHTTCEE
T ss_pred             CHHHHHHHHHHHHHCCCHHH-----H-----HHHHHHHHHHHHhCHHhhhCCEEEEECCCCCCCCHHHHHHHHHHCCCEE
Confidence            48899999999999887642     1     258999999999999999999999997    678999999999999999


Q ss_pred             EEceecCCCC-c-EEeeCCC-CCCCcccccccccCCccccccccCC----CCCccccEEEEccceeeCCCCCeeecCCch
Q 022559          171 LTPQPRLRTG-F-FSVLDSS-MLSPSTINEACTSVGVAKYGKQIGL----DEIIKVDLIVIGSVAVNPKTGARLGKGEGF  243 (295)
Q Consensus       171 ~lP~~~~~~~-~-~~~~~~~-~l~~g~l~~~~~~~G~~~~geP~~~----~~~~~iDLIIVPgvAFD~~~G~RLGyGgGY  243 (295)
                      +||++....+ + |..+++. .+          ..|.+++.||...    ....++|||||||||||+ +|+||||||||
T Consensus        71 ~lP~~~~~~~~m~f~~~~~~~~L----------~~~~~gi~EP~~~~~~~~~~~~iDlvivP~vafD~-~G~RLG~GgGy  139 (187)
T 1ydm_A           71 CIPKCHPDTKKMQFRTYQTDDQL----------ETVYAGLLEPVIEKTKEVNPSQIDLMIVPGVCFDV-NGFRVGFGGGY  139 (187)
T ss_dssp             EEECC---CCCCCEEECCCCTTH----------HHHHTTSCCCC--CCCCCCGGGCCEEECCCSEEET-TSCEECCSCCS
T ss_pred             EEeEEecCCCcEEEEEeCCCCcc----------CcCCCCCCCCCCcccccCCccCCCEEEeCCeEECC-CCCcccCCccH
Confidence            9998742222 3 5456543 23          2466777788532    234689999999999999 99999999999


Q ss_pred             hhhhhhhhhhcCCCCCCCCEEEEEcCccccCCCCC---cccccEEEE
Q 022559          244 AELEYGMLRYMGAIDDSTPVVTSGKCGFCRIFLPL---FYLVLFILF  287 (295)
Q Consensus       244 YDRfLa~l~~~~~~~~~~~~Vgla~d~Qvvd~LP~---D~~vd~Ii~  287 (295)
                      |||||+.++        .++||+||++|+++.||.   |++||.||+
T Consensus       140 YDR~L~~~~--------~~~igla~~~Q~~~~lP~e~hD~~ld~iiT  178 (187)
T 1ydm_A          140 YDRYLSEYE--------GKTVSLLLECQLFAHVPRLPHDIPVHKLIT  178 (187)
T ss_dssp             TTTGGGTCC--------SEEEEECCGGGEESCCCCCTTCCCCSEEEC
T ss_pred             HHHHHHhCC--------CCEEEEEeHHHhcCCCCCccccCcCCEEEE
Confidence            999998542        257999999999999996   899999997

>2jcb_A 5-formyltetrahydrofolate cyclo-ligase family PROT; folate metabolism; HET: ADP; 1.6A {Bacillus anthracis}

Probab=100.00  E-value=1.6e-39  Score=289.00  Aligned_cols=167  Identities=16%  Similarity=0.144  Sum_probs=137.6

Q ss_pred             hhHHHHHHHHHHHHHHhcccccCCCccccCCCCHHHHHHHHHHHhcChhhhcccEEEEeC----CCCcHHHHHHHHHCCC
Q 022559           93 KSWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNP----DSPQKQVRLLTLSGGK  168 (295)
Q Consensus        93 ~~~Kk~LRk~i~~~r~~~~~~~~~~~~~~r~p~f~~S~~I~~~L~~l~~~~~Ak~I~vy~----e~~t~~li~~al~~GK  168 (295)
                      .+.|++||++++++|++++.+.     ..     ..|..|+++|.+++.|++|++|++|+    |++|.++++.+++.||
T Consensus        10 ~~~K~~LR~~~~~~R~~ls~~~-----~~-----~~s~~i~~~l~~~~~~~~a~~I~~Y~~~~~Evdt~~li~~~~~~gk   79 (200)
T 2jcb_A           10 REEKLRLRKQIIEHMNSLSKER-----YT-----TLSEQIVFSLYEQKEWAEAKTIGITLSMENEVNTYPIIEKAWKEGK   79 (200)
T ss_dssp             HHHHHHHHHHHHHHHHHCCHHH-----HH-----HHHHHHHHHHHTSHHHHHCSEEECCCCCTTSCCCHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHCCCHHH-----HH-----HHHHHHHHHHHhChhhhcCCEEEEECCCCCCCCHHHHHHHHHHCCC
Confidence            6789999999999999987642     11     47899999999999999999999995    6789999999999999


Q ss_pred             EEEEceecCCCC-c-EEeeCCC-CCCCcccccccccCCccccccccCC----CCCccccEEEEccceeeCCCCCeeecCC
Q 022559          169 KLLTPQPRLRTG-F-FSVLDSS-MLSPSTINEACTSVGVAKYGKQIGL----DEIIKVDLIVIGSVAVNPKTGARLGKGE  241 (295)
Q Consensus       169 ~V~lP~~~~~~~-~-~~~~~~~-~l~~g~l~~~~~~~G~~~~geP~~~----~~~~~iDLIIVPgvAFD~~~G~RLGyGg  241 (295)
                      +|+||++....+ + |..+++. .+          ..|.+++.||...    ....++|||||||||||+ +|+||||||
T Consensus        80 ~v~lP~~~~~~~~m~f~~~~~~~~L----------~~g~~GI~EP~~~~~~~~~~~~iDlvlVP~vAfD~-~G~RLG~Gg  148 (200)
T 2jcb_A           80 RVVVPKCNKETRTMSFRQISNFDQL----------ETVYMNLREPIPALTEEVNADEIDLQIVPGVAYTE-RGERIGYGG  148 (200)
T ss_dssp             EEEEEEEETTTTEEEEEEESSGGGE----------EEEETTEEEECGGGCEECCGGGCSEEECCCSEECT-TSCEECSSS
T ss_pred             EEEEeEEEcCCCcEEEEEeCCCccc----------ccCCCCCCCCCCcccccCCccCCCEEEECCeEECC-CCCeeccCC
Confidence            999999753333 3 5456542 23          2466777788531    234689999999999999 999999999


Q ss_pred             chhhhhhhhhhhcCCCCCCCCEEEEEcCccccCCCCC---cccccEEEEE
Q 022559          242 GFAELEYGMLRYMGAIDDSTPVVTSGKCGFCRIFLPL---FYLVLFILFV  288 (295)
Q Consensus       242 GYYDRfLa~l~~~~~~~~~~~~Vgla~d~Qvvd~LP~---D~~vd~Ii~~  288 (295)
                      |||||||+.++        .++||+||++|+++.||.   |++||.||++
T Consensus       149 GyYDR~La~~~--------~~~igla~~~Q~v~~lP~e~hDi~ld~iiTe  190 (200)
T 2jcb_A          149 GYYDRYLVHYK--------GKTLSLAYSFQMVEHIPVEPFDKNVEKIITE  190 (200)
T ss_dssp             CHHHHHTTTCC--------SEEEEECCGGGBCSCCCCCTTCCCCSEEEET
T ss_pred             chHHHHHhhcC--------CCEEEEEehhhccCCCCCCccCCcCCEEEEC
Confidence            99999998542        257999999999999996   7999999983

>1sou_A 5,10-methenyltetrahydrofolate synthetase; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; NMR {Aquifex aeolicus} SCOP: c.124.1.6

Probab=100.00  E-value=2e-39  Score=286.93  Aligned_cols=162  Identities=20%  Similarity=0.140  Sum_probs=134.7

Q ss_pred             HHHHHHHHHHHHHHhcccccCCCccccCCCCHHHHHHHHHHHhcChhhhcccEEEEeC----CCCcHHHHHHHHHCCCEE
Q 022559           95 WKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNP----DSPQKQVRLLTLSGGKKL  170 (295)
Q Consensus        95 ~Kk~LRk~i~~~r~~~~~~~~~~~~~~r~p~f~~S~~I~~~L~~l~~~~~Ak~I~vy~----e~~t~~li~~al~~GK~V  170 (295)
                      .|++||++++++|++++.+.     .     +..|..|+++|.+++.|++|++|++|+    |++|.+|++.++++ |+|
T Consensus         2 ~K~~lR~~~~~~r~~l~~~~-----~-----~~~s~~i~~~l~~~~~~~~a~~I~~y~~~~~Evdt~~li~~~~~~-k~v   70 (194)
T 1sou_A            2 LKSELRKKVLHKRINLSEEE-----R-----RRLSEKVISNLKSLPEFKKSKKVALYCPIKGEVDLTPLFPEVLKE-KEL   70 (194)
T ss_dssp             CHHHHHHHHHHHHTTSCHHH-----H-----HHHHHHHHHHHHHCHHHHHCCEEEECCCCSSCCCCGGGHHHHHHH-SEE
T ss_pred             CHHHHHHHHHHHHHcCCHHH-----H-----HHHHHHHHHHHHhChhhhcCCEEEEECCCCCCCCHHHHHHHHHHc-CCE
Confidence            49999999999998876542     1     358999999999999999999999998    77899999999999 999


Q ss_pred             EEceecCCCCc-EEeeCC-CCCCCcccccccccCCccccccccC--CCCCccccEEEEccceeeCCCCCeeecCCchhhh
Q 022559          171 LTPQPRLRTGF-FSVLDS-SMLSPSTINEACTSVGVAKYGKQIG--LDEIIKVDLIVIGSVAVNPKTGARLGKGEGFAEL  246 (295)
Q Consensus       171 ~lP~~~~~~~~-~~~~~~-~~l~~g~l~~~~~~~G~~~~geP~~--~~~~~~iDLIIVPgvAFD~~~G~RLGyGgGYYDR  246 (295)
                      +||++. ...+ |..+++ +.+.          .|.+++.||..  .....++|||||||||||+ +|+|||||||||||
T Consensus        71 ~lP~~~-~~~m~f~~~~~~~~L~----------~g~~GI~EP~~~~~~~~~~iDlvlvP~vafD~-~G~RLG~GgGyYDR  138 (194)
T 1sou_A           71 ILPKVE-GNEISLYRVHSPACLG----------VGAFGIMEPVEGERVNPEDVDFIAVPGVAFDL-EGYRLGFGKGYYDR  138 (194)
T ss_dssp             EEEEES-SSSEEEEEESSSCCCE----------ECSSSCEECCSSEEECGGGCSEEEECCSCBCS-SSCBCCSCCSSHHH
T ss_pred             EEEEec-CCeeEEEEECCCCccC----------CCCCCCCCCCccccCCCCCCCEEEECCeEECC-CCceeccCCcHHHH
Confidence            999873 2233 556654 3342          46677788864  1235689999999999999 99999999999999


Q ss_pred             hhhhhhhcCCCCCCCCEEEEEcCccccCCCCC---cccccEEEE
Q 022559          247 EYGMLRYMGAIDDSTPVVTSGKCGFCRIFLPL---FYLVLFILF  287 (295)
Q Consensus       247 fLa~l~~~~~~~~~~~~Vgla~d~Qvvd~LP~---D~~vd~Ii~  287 (295)
                      ||+.++        +++||+||++|+++.||.   |++||.||+
T Consensus       139 ~L~~~~--------~~~igla~~~Q~v~~lP~e~hDi~ld~iiT  174 (194)
T 1sou_A          139 LLKRVK--------GLKVGVAYSFQVFERLPRDAWDIPVDVLVT  174 (194)
T ss_dssp             HHHHCC--------SEEEEECCGGGBCSCCCCCSCCCCCSEEEC
T ss_pred             HHHhcC--------CCEEEEEchHhccCCCCCCcccccCCEEEE
Confidence            998652        357999999999999996   799999998

>1wkc_A HB8 TT1367 protein; structural genomics, riken structural genomics/proteomi initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.124.1.6

Probab=100.00  E-value=1.1e-37  Score=273.70  Aligned_cols=154  Identities=16%  Similarity=0.091  Sum_probs=122.8

Q ss_pred             HHHHHHHHHHHHHHhcccccCCCccccCCCCHHHHHHHHHHHhcChhhhcccEEEEeC----CCCcHHHHHHHHHCCCEE
Q 022559           95 WKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNP----DSPQKQVRLLTLSGGKKL  170 (295)
Q Consensus        95 ~Kk~LRk~i~~~r~~~~~~~~~~~~~~r~p~f~~S~~I~~~L~~l~~~~~Ak~I~vy~----e~~t~~li~~al~~GK~V  170 (295)
                      .|++||++++++|++++.+             ..|..|+++|.+++.|++|++|++|+    |++|.++++  |++ |+|
T Consensus         2 ~K~~lR~~~~~~r~~l~~~-------------~~s~~i~~~l~~~~~~~~a~~I~~y~~~~~Evdt~~li~--~~~-k~v   65 (184)
T 1wkc_A            2 TKAELRRRARAAWRRLDLK-------------ALSRAVGAALLPWLRERGFRHILLYHPLPHELNLLPLME--AYP-ARY   65 (184)
T ss_dssp             CHHHHHHHHHHHHHTSCHH-------------HHHHHHHHHHHHHHHHHTCCEEECCCCCTTCCCCTTHHH--HSC-CEE
T ss_pred             CHHHHHHHHHHHHHcCCHH-------------HHHHHHHHHHHhChhhhcCCEEEEECCCCCCcCHHHHHH--hhc-CCE
Confidence            4999999999999887553             15889999999999999999999997    567899999  888 999


Q ss_pred             EEceecCCCCc-EEeeCCCCCCCcccccccccCCccccccccCCC--CCccccEEEEccceeeCCCCCeeecCCchhhhh
Q 022559          171 LTPQPRLRTGF-FSVLDSSMLSPSTINEACTSVGVAKYGKQIGLD--EIIKVDLIVIGSVAVNPKTGARLGKGEGFAELE  247 (295)
Q Consensus       171 ~lP~~~~~~~~-~~~~~~~~l~~g~l~~~~~~~G~~~~geP~~~~--~~~~iDLIIVPgvAFD~~~G~RLGyGgGYYDRf  247 (295)
                      +||++... .+ |..++  .+.          .|.+++.|| ...  ...++|||||||||||+ +|+||||||||||||
T Consensus        66 ~lP~~~~~-~m~f~~~~--~L~----------~~~~gi~EP-~~~~~~~~~iDlvlvP~vafD~-~G~RLG~GgGyYDR~  130 (184)
T 1wkc_A           66 YLPKVAGK-GLTVHPFG--PLA----------PGPFGLLEP-TTPPEDPRVLDLVVVPGLAFDR-EGYRLGHGQGFYDRF  130 (184)
T ss_dssp             EEEEEETT-EEEEEESC--CBC-----------------CB-CSCCBCGGGCSEEEECCSEEET-TSCEECCSSCHHHHH
T ss_pred             EEeEEeCC-ceEEEEec--ccC----------CCCCCCCCC-CCccCCCCCCCEEEECcEEECC-CCCEeeCCccHHHHH
Confidence            99986323 32 44554  332          466777888 322  34689999999999999 999999999999999


Q ss_pred             hhhhhhcCCCCCCCCEEEEEcCccccCCCCC---cccccEEEE
Q 022559          248 YGMLRYMGAIDDSTPVVTSGKCGFCRIFLPL---FYLVLFILF  287 (295)
Q Consensus       248 La~l~~~~~~~~~~~~Vgla~d~Qvvd~LP~---D~~vd~Ii~  287 (295)
                      |+.+.        +++||+||++|+++.||.   |++||.||+
T Consensus       131 L~~~~--------~~~igl~~~~Q~~~~lp~e~hD~~ld~iiT  165 (184)
T 1wkc_A          131 LKEVR--------AATVGVVPQALLFPALPRDPWDVPVDHLAT  165 (184)
T ss_dssp             HHHCC--------SEEEEECCGGGEESCCCCCTTCCCCSEEEE
T ss_pred             HHhcC--------CCEEEEEchhhccCCCCCccccCccCEEEE
Confidence            98652        357999999999999986   799999998

>1sbq_A H91_ORF164, 5,10-methenyltetrahydrofolate synthetase homolog; MTHFS, 5- formyltetrahydrofolate cyclo-ligase, structural genomics; 2.20A {Mycoplasma pneumoniae} SCOP: c.124.1.6 PDB: 1u3f_A* 1u3g_A*

Probab=100.00  E-value=3.8e-37  Score=271.80  Aligned_cols=153  Identities=14%  Similarity=0.063  Sum_probs=125.3

Q ss_pred             hHHHHHHHHHHHHHHhcccccCCCccccCCCCHHHHHHHHHHHhcChhhh-cccEEEEeC----CCCcHHHHHHHHHCCC
Q 022559           94 SWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFR-VAGCVKVNP----DSPQKQVRLLTLSGGK  168 (295)
Q Consensus        94 ~~Kk~LRk~i~~~r~~~~~~~~~~~~~~r~p~f~~S~~I~~~L~~l~~~~-~Ak~I~vy~----e~~t~~li~~al~~GK  168 (295)
                      +.|++||++++++|++++.+.     ..     ..|..|+++|.+++.|+ +|++|++|+    |++|.+|++.++++||
T Consensus        26 m~K~~LR~~~~~~R~~l~~~~-----~~-----~~s~~i~~~L~~~~~~~~~a~~I~~Y~~~~~Evdt~~li~~~~~~gk   95 (189)
T 1sbq_A           26 MDKNALRKQILQKRMALSTIE-----KS-----HLDQKINQKLVAFLTPKPCIKTIALYEPIKNEVTFVDFFFEFLKINQ   95 (189)
T ss_dssp             CCHHHHHHHHHHHHHHCCHHH-----HH-----HHHHHHHHHHHHHHTTCTTCCEEECCCCCTTSCCCCHHHHHHHHHTT
T ss_pred             ccHHHHHHHHHHHHHCCCHHH-----HH-----HHHHHHHHHHHHhHHhHhhCCEEEEECCCCCCCCHHHHHHHHHHcCC
Confidence            459999999999999886542     11     47899999999999999 999999998    6789999999999999


Q ss_pred             -EEEEceecCCCCc-EEeeCCCCCCCcccccccccCCccccccccCCCCCccccEEEEccceeeCCCCCeeecCCchhhh
Q 022559          169 -KLLTPQPRLRTGF-FSVLDSSMLSPSTINEACTSVGVAKYGKQIGLDEIIKVDLIVIGSVAVNPKTGARLGKGEGFAEL  246 (295)
Q Consensus       169 -~V~lP~~~~~~~~-~~~~~~~~l~~g~l~~~~~~~G~~~~geP~~~~~~~~iDLIIVPgvAFD~~~G~RLGyGgGYYDR  246 (295)
                       +|+||++.....+ |..+++.                     +.   ...++|||||||||||+ +|+|||||||||||
T Consensus        96 ~~v~lP~~~~~~~m~f~~~~~~---------------------~~---~~~~iDlvlVP~vAfD~-~G~RLG~GgGyYDR  150 (189)
T 1sbq_A           96 IRAVYPKVISDTEIIFIDQETN---------------------TF---EPNQIDCFLIPLVGFNK-DNYRLGFGKGYYDR  150 (189)
T ss_dssp             CEEEEEEECSSSCEEEECTTCC---------------------EE---CGGGCCEEEEECSEECT-TCCEECCSSCHHHH
T ss_pred             CeEEEeEEccCCceEEEEeCCC---------------------CC---CcccCCEEEECceEECC-CCCEeecCCchHHH
Confidence             9999987422222 3222211                     11   23568999999999999 99999999999999


Q ss_pred             hhhhhhhcCCCCCCCCEEEEEcCccccCCCCC---cccccEEEEE
Q 022559          247 EYGMLRYMGAIDDSTPVVTSGKCGFCRIFLPL---FYLVLFILFV  288 (295)
Q Consensus       247 fLa~l~~~~~~~~~~~~Vgla~d~Qvvd~LP~---D~~vd~Ii~~  288 (295)
                      ||+.+.      ..+++||+||++|+++ ||.   |++||.||++
T Consensus       151 ~La~~~------~~~~~igla~~~Q~v~-lP~e~hDiplD~IiTe  188 (189)
T 1sbq_A          151 YLMQLT------RQQPKIGIAYSFQKGD-FLADPWDVQLDLIIND  188 (189)
T ss_dssp             HGGGCC------SCCCEEEEECGGGBCC-CCCCTTSCCCSEEEEC
T ss_pred             HHHhcC------CCCCEEEEechHheeC-CCCCcccCcCCEEEcC
Confidence            998653      2357899999999999 996   7999999974

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	295
d1soua_	194	Hypothetical protein aq_1731 {Aquifex aeolicus [Ta	100.0
d1wkca_	175	Hypothetical protein TTHA1611 {Thermus thermophilu	100.0
d1sbqa_	164	5,10-methenyltetrahydrofolate synthetase homolog M	100.0

>d1soua_ c.124.1.6 (A:) Hypothetical protein aq_1731 {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: Methenyltetrahydrofolate synthetase
domain: Hypothetical protein aq 1731
species: Aquifex aeolicus [TaxId: 63363]

Probab=100.00  E-value=2.9e-38  Score=277.10  Aligned_cols=170  Identities=19%  Similarity=0.120  Sum_probs=136.2

Q ss_pred             hHHHHHHHHHHHHHHhcccccCCCccccCCCCHHHHHHHHHHHhcChhhhcccEEEEeC----CCCcHHHHHHHHHCCCE
Q 022559           94 SWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNP----DSPQKQVRLLTLSGGKK  169 (295)
Q Consensus        94 ~~Kk~LRk~i~~~r~~~~~~~~~~~~~~r~p~f~~S~~I~~~L~~l~~~~~Ak~I~vy~----e~~t~~li~~al~~GK~  169 (295)
                      +.|++||++++++|+.++.+.     ..     ..|..|+++|.+++.|+++++|++|+    |++|.++++.+++ +|+
T Consensus         1 M~K~~lRk~~~~~R~~ls~~~-----~~-----~~s~~i~~~l~~~~~~~~~~~I~~Y~p~~~Evdt~~li~~l~~-~k~   69 (194)
T d1soua_           1 MLKSELRKKVLHKRINLSEEE-----RR-----RLSEKVISNLKSLPEFKKSKKVALYCPIKGEVDLTPLFPEVLK-EKE   69 (194)
T ss_dssp             CCHHHHHHHHHHHHTTSCHHH-----HH-----HHHHHHHHHHHHCHHHHHCCEEEECCCCSSCCCCGGGHHHHHH-HSE
T ss_pred             CCHHHHHHHHHHHHHcCCHHH-----HH-----HHHHHHHHHHHHhHHhhcCCEEEEEecccccCChHHHHHHHhh-ccc
Confidence            359999999999998876542     11     47999999999999999999999996    5688999999986 579


Q ss_pred             EEEceecCCCCcEEeeC-CCCCCCcccccccccCCccccccccCCC--CCccccEEEEccceeeCCCCCeeecCCchhhh
Q 022559          170 LLTPQPRLRTGFFSVLD-SSMLSPSTINEACTSVGVAKYGKQIGLD--EIIKVDLIVIGSVAVNPKTGARLGKGEGFAEL  246 (295)
Q Consensus       170 V~lP~~~~~~~~~~~~~-~~~l~~g~l~~~~~~~G~~~~geP~~~~--~~~~iDLIIVPgvAFD~~~G~RLGyGgGYYDR  246 (295)
                      |++|++......|..+. .+.+.          .|.+++.||....  .+.++|+|||||||||+ +|+|||||||||||
T Consensus        70 v~lP~i~~~~m~~~~~~~~~~l~----------~~~~gI~EP~~~~~~~~~~iDlilVP~lafD~-~G~RlG~G~GyYDR  138 (194)
T d1soua_          70 LILPKVEGNEISLYRVHSPACLG----------VGAFGIMEPVEGERVNPEDVDFIAVPGVAFDL-EGYRLGFGKGYYDR  138 (194)
T ss_dssp             EEEEEESSSSEEEEEESSSCCCE----------ECSSSCEECCSSEEECGGGCSEEEECCSCBCS-SSCBCCSCCSSHHH
T ss_pred             ccccccchhceeeeccCCCcccc----------cccccccCCCccccccccccceehhhHHHHhh-cCCccccCCEeHHH
Confidence            99999863322233343 34342          3566677775432  35689999999999999 99999999999999


Q ss_pred             hhhhhhhcCCCCCCCCEEEEEcCccccCCCCC---cccccEEEE---EEeeec
Q 022559          247 EYGMLRYMGAIDDSTPVVTSGKCGFCRIFLPL---FYLVLFILF---VYCIES  293 (295)
Q Consensus       247 fLa~l~~~~~~~~~~~~Vgla~d~Qvvd~LP~---D~~vd~Ii~---~~~~~~  293 (295)
                      ||+.+        ++.+|||||++|+++.||.   |++||.||+   +|.|+.
T Consensus       139 ~L~~~--------~~~~igl~~~~Q~~~~ip~e~hD~~ld~iiTe~~i~~~~~  183 (194)
T d1soua_         139 LLKRV--------KGLKVGVAYSFQVFERLPRDAWDIPVDVLVTEKNVRRLRD  183 (194)
T ss_dssp             HHHHC--------CSEEEEECCGGGBCSCCCCCSCCCCCSEEECSSCEEESCC
T ss_pred             hhhcc--------CCCEEEEEecceecCCCCCCCcCeECCEEEEccceEEecC
Confidence            99864        3467999999999999996   799999999   666654

>d1wkca_ c.124.1.6 (A:) Hypothetical protein TTHA1611 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: Methenyltetrahydrofolate synthetase
domain: Hypothetical protein TTHA1611
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.5e-37  Score=264.63  Aligned_cols=162  Identities=15%  Similarity=0.072  Sum_probs=125.7

Q ss_pred             hHHHHHHHHHHHHHHhcccccCCCccccCCCCHHHHHHHHHHHhcChhhhcccEEEEeC----CCCcHHHHHHHHHCCCE
Q 022559           94 SWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRVAGCVKVNP----DSPQKQVRLLTLSGGKK  169 (295)
Q Consensus        94 ~~Kk~LRk~i~~~r~~~~~~~~~~~~~~r~p~f~~S~~I~~~L~~l~~~~~Ak~I~vy~----e~~t~~li~~al~~GK~  169 (295)
                      ++|++||+++++.|+.++.+             ..|..|+++|.+++.++++++|++|+    |++|.++++.   .||+
T Consensus         1 m~K~~lRk~~r~~r~~l~~~-------------~~s~~i~~~l~~~~~~~~~~~I~~Y~p~~~Evdt~~li~~---~~k~   64 (175)
T d1wkca_           1 MTKAELRRRARAAWRRLDLK-------------ALSRAVGAALLPWLRERGFRHILLYHPLPHELNLLPLMEA---YPAR   64 (175)
T ss_dssp             CCHHHHHHHHHHHHHTSCHH-------------HHHHHHHHHHHHHHHHHTCCEEECCCCCTTCCCCTTHHHH---SCCE
T ss_pred             CCHHHHHHHHHHHHhcCCHH-------------HHHHHHHHHHHHHHHhcCCCEEEEEEeECCccCcchhhhc---ccce
Confidence            36999999999998876432             36889999999999999999999997    5678888764   4999


Q ss_pred             EEEceecCCCCc-EEeeCCCCCCCcccccccccCCccccccccCCC-CCccccEEEEccceeeCCCCCeeecCCchhhhh
Q 022559          170 LLTPQPRLRTGF-FSVLDSSMLSPSTINEACTSVGVAKYGKQIGLD-EIIKVDLIVIGSVAVNPKTGARLGKGEGFAELE  247 (295)
Q Consensus       170 V~lP~~~~~~~~-~~~~~~~~l~~g~l~~~~~~~G~~~~geP~~~~-~~~~iDLIIVPgvAFD~~~G~RLGyGgGYYDRf  247 (295)
                      |++|++.. .++ |..+  +.+.          .|.+++.||.... ....+|||||||||||. +|+||||||||||||
T Consensus        65 v~lP~i~~-~~l~~~~~--~~l~----------~~~~gI~EP~~~~~~~~~~DliivP~vafD~-~G~RlG~G~GyYDR~  130 (175)
T d1wkca_          65 YYLPKVAG-KGLTVHPF--GPLA----------PGPFGLLEPTTPPEDPRVLDLVVVPGLAFDR-EGYRLGHGQGFYDRF  130 (175)
T ss_dssp             EEEEEEET-TEEEEEES--CCBC-----------------CBCSCCBCGGGCSEEEECCSEEET-TSCEECCSSCHHHHH
T ss_pred             eeeecccc-cceeecch--hhcc----------hhhhhcccccccccccccccEEEeeehheee-cCcccccCcchHHHH
Confidence            99999863 232 3233  2332          3556666775432 45679999999999999 999999999999999


Q ss_pred             hhhhhhcCCCCCCCCEEEEEcCccccCCCCC---cccccEEEE---EEeeec
Q 022559          248 YGMLRYMGAIDDSTPVVTSGKCGFCRIFLPL---FYLVLFILF---VYCIES  293 (295)
Q Consensus       248 La~l~~~~~~~~~~~~Vgla~d~Qvvd~LP~---D~~vd~Ii~---~~~~~~  293 (295)
                      |+.+        ++.+||+||++|+++.||.   |++||.||+   +++|++
T Consensus       131 L~~~--------~~~~igl~~~~q~~~~ip~e~hDi~ld~iiTe~gi~~~k~  174 (175)
T d1wkca_         131 LKEV--------RAATVGVVPQALLFPALPRDPWDVPVDHLATEAGVEAVKR  174 (175)
T ss_dssp             HHHC--------CSEEEEECCGGGEESCCCCCTTCCCCSEEEETTEEEECCC
T ss_pred             Hhhc--------CCCEEEEEehhheeCCCCCCcccccCCEEEeCcccEEecC
Confidence            9854        3467999999999999986   899999999   777765

>d1sbqa_ c.124.1.6 (A:) 5,10-methenyltetrahydrofolate synthetase homolog MPN348 {Mycoplasma pneumoniae [TaxId: 2104]}

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: Methenyltetrahydrofolate synthetase
domain: 5,10-methenyltetrahydrofolate synthetase homolog MPN348
species: Mycoplasma pneumoniae [TaxId: 2104]

Probab=100.00  E-value=4.7e-34  Score=243.65  Aligned_cols=154  Identities=15%  Similarity=0.055  Sum_probs=117.8

Q ss_pred             hHHHHHHHHHHHHHHhcccccCCCccccCCCCHHHHHHHHHHHhcChhhhc-ccEEEEeC----CCCcHHHHHHHHHCCC
Q 022559           94 SWKWIIRKRIWDLMEVQNIAQNPRPVHHRIPNFVGASVAAKNLTGLEEFRV-AGCVKVNP----DSPQKQVRLLTLSGGK  168 (295)
Q Consensus        94 ~~Kk~LRk~i~~~r~~~~~~~~~~~~~~r~p~f~~S~~I~~~L~~l~~~~~-Ak~I~vy~----e~~t~~li~~al~~GK  168 (295)
                      ++|++||++++++|++++...     ..     ..|..|+++|.++..++. +++|++|.    |++|.+++..++..|+
T Consensus         1 M~K~~lR~~~~~~R~~l~~~~-----~~-----~~s~~i~~~l~~~~~~~~~~~~I~~Y~p~~~Evd~~~l~~~~l~~~~   70 (164)
T d1sbqa_           1 MDKNALRKQILQKRMALSTIE-----KS-----HLDQKINQKLVAFLTPKPCIKTIALYEPIKNEVTFVDFFFEFLKINQ   70 (164)
T ss_dssp             CCHHHHHHHHHHHHHHCCHHH-----HH-----HHHHHHHHHHHHHHTTCTTCCEEECCCCCTTSCCCCHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHHHcCCHHH-----HH-----HHHHHHHHHHHHhhhhhhhcCEEEEEeccCCcccchHHHHHHHHcCC
Confidence            369999999999999886542     11     478999999988766655 59999996    4678889988887665


Q ss_pred             -EEEEceecCCCCc-EEeeCCCCCCCcccccccccCCccccccccCCCCCccccEEEEccceeeCCCCCeeecCCchhhh
Q 022559          169 -KLLTPQPRLRTGF-FSVLDSSMLSPSTINEACTSVGVAKYGKQIGLDEIIKVDLIVIGSVAVNPKTGARLGKGEGFAEL  246 (295)
Q Consensus       169 -~V~lP~~~~~~~~-~~~~~~~~l~~g~l~~~~~~~G~~~~geP~~~~~~~~iDLIIVPgvAFD~~~G~RLGyGgGYYDR  246 (295)
                       ++++|++.....+ |..+                  .+++.+|      .++|+|||||||||+ +|+|||||||||||
T Consensus        71 ~~~~~P~i~~~~~~~~~~~------------------~~~~~eP------~~iDliivP~lafD~-~G~RLGyGgGyYDR  125 (164)
T d1sbqa_          71 IRAVYPKVISDTEIIFIDQ------------------ETNTFEP------NQIDCFLIPLVGFNK-DNYRLGFGKGYYDR  125 (164)
T ss_dssp             CEEEEEEECSSSCEEEECT------------------TCCEECG------GGCCEEEEECSEECT-TCCEECCSSCHHHH
T ss_pred             eEEEEeeccCcccceeccc------------------cccccCC------cccCEEEeeeheeee-ecCccccccChHHH
Confidence             8999987533222 2110                  0112233      468999999999999 99999999999999


Q ss_pred             hhhhhhhcCCCCCCCCEEEEEcCccccCCCC--CcccccEEEEE
Q 022559          247 EYGMLRYMGAIDDSTPVVTSGKCGFCRIFLP--LFYLVLFILFV  288 (295)
Q Consensus       247 fLa~l~~~~~~~~~~~~Vgla~d~Qvvd~LP--~D~~vd~Ii~~  288 (295)
                      ||+.+.      .++++|||||++|+++.+|  .|++||.||++
T Consensus       126 ~L~~~~------~~~~~igla~~~Q~~~~~~e~hDi~ld~iiTe  163 (164)
T d1sbqa_         126 YLMQLT------RQQPKIGIAYSFQKGDFLADPWDVQLDLIIND  163 (164)
T ss_dssp             HGGGCC------SCCCEEEEECGGGBCCCCCCTTSCCCSEEEEC
T ss_pred             HHHhcC------CCCCEEEEEehhhccCCCCCcccccCCEEeCC
Confidence            998653      2456899999999988664  48999999974