Citrus Sinensis ID: 022650

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290----
Protein Sequence
MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARSVLR
Secondary Structure (PSIPRED)
cEEccccccEEEEEEEEEEccccccEEEEEEEEccccEEEEccccEEEEEEccccEEEcccccccHHHHHcccccccccccccccHHHHHHHccccccHHHHHHHHHHHcccccccEEEEEEEEEEEEEEEEEEEcccccEEHEEEEccccccEEEEEEEEEEEcccccccccccccEEEEEccccEEEEEEEEEEEEEEEEccccEEEEEEEEEEEEEEEEccccccccEEEEEEEcccEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cEEEcccccEEEEEEEEEcccccccEEEEEEEEcccccEEcccccEEEEEEcccccEccccHccccccccccccccccccccHHHHHHHHHHcccccccccccHHHccHHHcccccEEEEEEEEEEEEccEEEcccccccccccccccccccccEEEEEEEEccccccccccccccccEEEccccccEEEEEEEEEEEEEEEccccEEEccEEEEEEEEEEcccccccccEEEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
msvdlkrgetlpihinmtfpalpcdvlsvdaidmsgkhevdldTNIWKLRLNSYghiigteylTDLVEKEHEehkhdhnkdhkddideklhafgfdedAENMIKKVKHALesgegcrvygVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIhdlsfgpkypgihnpldgtvrmlhdtsgtfkYYIKIvpteyryiskdvlptnqfsvTEYFSTINefdrtwpavyflydlspitvTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTkpsarsvlr
Flexible Loop (DISEMBL)
MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLVEKEHEEHkhdhnkdhkddIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEaltkpsarsvlr
Low Complexity Region (SEG)
MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLVekeheehkhdhnkdhkddidekLHAFGFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARSVLR
Disordered region (IsUnstruct)
*********TLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLV***********************HAFGFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEAL**********
Disordered Region (DISOPRED)
MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFST****DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEAL***S******
Disordered Region (DISEMBL)
MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLVEK**************DDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK********
Disordered Region (DISPRO)
MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKP*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARSVLR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	294	2.2.26 [Sep-21-2011]
Q66KH2	389	Endoplasmic reticulum-Gol	N/A	no	0.959	0.724	0.348	1e-47
Q803I2	383	Endoplasmic reticulum-Gol	yes	no	0.965	0.741	0.354	1e-47
Q6NVS2	384	Endoplasmic reticulum-Gol	yes	no	0.962	0.736	0.352	3e-47
Q5EAE0	383	Endoplasmic reticulum-Gol	yes	no	0.965	0.741	0.344	3e-47
Q4R8X1	382	Endoplasmic reticulum-Gol	N/A	no	0.945	0.727	0.345	4e-47
Q9Y282	383	Endoplasmic reticulum-Gol	yes	no	0.945	0.725	0.344	8e-47
Q5R8G3	383	Endoplasmic reticulum-Gol	yes	no	0.965	0.741	0.351	1e-46
Q9CQE7	383	Endoplasmic reticulum-Gol	yes	no	0.965	0.741	0.354	2e-46
Q54DW2	383	Probable endoplasmic reti	yes	no	0.945	0.725	0.337	6e-44
Q09895	390	Uncharacterized protein C	yes	no	0.918	0.692	0.294	1e-27

>sp|Q66KH2|ERGI3_XENLA Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Xenopus laevis GN=ergic3 PE=2 SV=1

 Score =  190 bits (482), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/324 (34%), Positives = 174/324 (53%), Gaps = 42/324 (12%)

Query: 3   VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
           VD  RG+ L I+I++ FP +PC  LS+DA+D++G+ ++D++ N++K RL+     + +E 
Sbjct: 60  VDKSRGDKLKINIDVIFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDLDKKPVTSEA 119

Query: 63  LTDLVEKEHEE-----HKHDHNK---------------DHKDDIDEKLHAFGFDEDAENM 102
               + K  E+        D N+               +  DD+ E     G+     + 
Sbjct: 120 DRHELGKSEEQVVFDPKTLDPNRCESCYGAETDDFSCCNSCDDVREAYRRKGWAFKTPDS 179

Query: 103 IKKVKH-------ALESGEGCRVYGVLDVQRVAGNFHIS-----------VHGLNIYVAQ 144
           I++ K          +  EGC+VYG L+V +VAGNFH +           VH + I+  Q
Sbjct: 180 IEQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHAVEIHDLQ 239

Query: 145 MIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYIS 204
               G  N+N++H I  LSFG  YPG+ NPLDGT  +   +S  F+Y++KIVPT Y  + 
Sbjct: 240 SF--GLDNINMTHEIKHLSFGKDYPGLVNPLDGTSIVAMQSSMMFQYFVKIVPTVYVKVD 297

Query: 205 KDVLPTNQFSVTEYFSTINEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAV 262
            +VL TNQFSVT +    N    D+  P V+ LY+LSP+ V   E+ RSF H +T +CA+
Sbjct: 298 GEVLRTNQFSVTRHEKMTNGLIGDQGLPGVFVLYELSPMMVKFTEKHRSFTHFLTGVCAI 357

Query: 263 LGGTFALTGMLDRWMYRLLEALTK 286
           +GG F + G++D  +Y    A+ K
Sbjct: 358 IGGVFTVAGLIDSLIYYSTRAIQK 381

Possible role in transport between endoplasmic reticulum and Golgi.
Xenopus laevis (taxid: 8355)

>sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio GN=ergic3 PE=2 SV=1

 Score =  190 bits (482), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/316 (35%), Positives = 170/316 (53%), Gaps = 32/316 (10%)

Query: 3   VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
           VD  RG+ L I+I++ FP +PC  LS+DA+D++G+ ++D++ N++K RL+  G  + TE 
Sbjct: 60  VDTSRGDKLRINIDVIFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGQPVTTEA 119

Query: 63  LTDLVEKEHE-------------EHKHDHNKDH------KDDIDEKLHAFGFDEDAENMI 103
               + KE E             E  +    D        DD+ E     G+     + I
Sbjct: 120 EKHDLGKEEEGVFDPSTLDPDRCESCYGAETDDLKCCNTCDDVREAYRRRGWAFKTPDTI 179

Query: 104 KKVKH-------ALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKN 152
           ++ K          +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N
Sbjct: 180 EQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDN 239

Query: 153 VNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQ 212
           +N++H I  LSFG  YPGI NPLD T       S  ++Y++KIVPT Y     +V+ TNQ
Sbjct: 240 INMTHFIKHLSFGKDYPGIVNPLDDTNVAAPQASMMYQYFVKIVPTIYVKGDGEVVKTNQ 299

Query: 213 FSVTEYFSTINEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALT 270
           FSVT +    N    D+  P V+ LY+LSP+ V   E++RSF H +T +CA++GG F + 
Sbjct: 300 FSVTRHEKIANGLIGDQGLPGVFVLYELSPMMVKFTEKQRSFTHFLTGVCAIIGGVFTVA 359

Query: 271 GMLDRWMYRLLEALTK 286
           G++D  +Y    A+ K
Sbjct: 360 GLIDSLIYHSARAIQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Danio rerio (taxid: 7955)

>sp|Q6NVS2|ERGI3_XENTR Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Xenopus tropicalis GN=ergic3 PE=2 SV=1

 Score =  189 bits (479), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/318 (35%), Positives = 174/318 (54%), Gaps = 35/318 (11%)

Query: 3   VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
           VD  RG+ L I+I++ FP +PC  LS+DA+D++G+ ++D++ N++K RL+     + +E 
Sbjct: 60  VDKSRGDKLKINIDVIFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDKKPVTSEA 119

Query: 63  LTDLVEKEHEEH------KHDHNK---------------DHKDDIDEKLHAFGFDEDAEN 101
               + K  EEH        D N+               +  DD+ E     G+     +
Sbjct: 120 DRHELGKS-EEHVVFDPKSLDPNRCESCYGAETDDFSCCNTCDDVREAYRRRGWAFKTPD 178

Query: 102 MIKKVKH-------ALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGA 150
            I++ K          +  EGC+VYG L+V +VAGNFH     S    +++V  +   G 
Sbjct: 179 SIEQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGL 238

Query: 151 KNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPT 210
            N+N++H I  LSFG  YPG+ NPLDG+      +S  F+Y++KIVPT Y  +  +VL T
Sbjct: 239 DNINMTHEIRHLSFGRDYPGLVNPLDGSSVAAMQSSMMFQYFVKIVPTVYVKVDGEVLRT 298

Query: 211 NQFSVTEYFSTINEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFA 268
           NQFSVT +    N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F 
Sbjct: 299 NQFSVTRHEKMTNGLIGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGVFT 358

Query: 269 LTGMLDRWMYRLLEALTK 286
           + G++D  +Y    A+ K
Sbjct: 359 VAGLIDSLVYYSTRAIQK 376

Possible role in transport between endoplasmic reticulum and Golgi.

Xenopus tropicalis (taxid: 8364)

>sp|Q5EAE0|ERGI3_BOVIN Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Bos taurus GN=ERGIC3 PE=2 SV=1

 Score =  188 bits (478), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/316 (34%), Positives = 172/316 (54%), Gaps = 32/316 (10%)

Query: 3   VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTE- 61
           VD  RG+ L I+IN+ FP +PC  LS+DA+D++G+ ++D++ N++K RL+  G  + +E 
Sbjct: 60  VDKSRGDKLKININVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKKRLDKDGFPVSSEA 119

Query: 62  ------------YLTDLVEKEHEEHKHDHNKD------HKDDIDEKLHAFGFDEDAENMI 103
                       +  D ++ +  E  +    +        +D+ E     G+     + I
Sbjct: 120 ERHELGKVEVKVFDPDSLDPDRCESCYGAEMEDIKCCNSCEDVREAYRRRGWAFKNPDTI 179

Query: 104 KKV-------KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKN 152
           ++        K   +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N
Sbjct: 180 EQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDN 239

Query: 153 VNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQ 212
           +N++H I  LSFG  YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL TNQ
Sbjct: 240 INMTHYIRHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQ 299

Query: 213 FSVTEYFSTINEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALT 270
           FSVT +    N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + 
Sbjct: 300 FSVTRHEKVANGLMGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVA 359

Query: 271 GMLDRWMYRLLEALTK 286
           G++D  +Y    A+ K
Sbjct: 360 GLIDSLIYHSARAIQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Bos taurus (taxid: 9913)

>sp|Q4R8X1|ERGI3_MACFA Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Macaca fascicularis GN=ERGIC3 PE=2 SV=1

 Score =  188 bits (477), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 111/321 (34%), Positives = 170/321 (52%), Gaps = 43/321 (13%)

Query: 3   VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
           VD  RG+ L I+I++ FP +PC  LS+DA+D++G+ ++D++ N++K RL+  G  + +E 
Sbjct: 60  VDKSRGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGTPVSSE- 118

Query: 63  LTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAE-----NMIKKVKHAL------- 110
                 + HE  K +      D +D       +  +AE     N  + V+ A        
Sbjct: 119 -----AERHELGKVEVTVFGPDSLDPDRCESCYGAEAEDIKCCNTCEDVREAYRRRGAFK 173

Query: 111 -------------------ESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIF 147
                              +  EGC+VYG L+V +VAGNFH     S    +++V  +  
Sbjct: 174 NPDTIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQS 233

Query: 148 GGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDV 207
            G  N+N++H I  LSFG  YPGI NPLD T       S  F+Y++K+VPT Y  +  +V
Sbjct: 234 FGLDNINMTHYIQHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEV 293

Query: 208 LPTNQFSVTEYFSTINEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGG 265
           L TNQFSVT +    N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG
Sbjct: 294 LRTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGG 353

Query: 266 TFALTGMLDRWMYRLLEALTK 286
            F + G++D  +Y    A+ K
Sbjct: 354 MFTVAGLIDSLIYHSARAIQK 374

Possible role in transport between endoplasmic reticulum and Golgi.

Macaca fascicularis (taxid: 9541)

>sp|Q9Y282|ERGI3_HUMAN Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Homo sapiens GN=ERGIC3 PE=1 SV=1

 Score =  187 bits (475), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 111/322 (34%), Positives = 170/322 (52%), Gaps = 44/322 (13%)

Query: 3   VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
           VD  RG+ L I+I++ FP +PC  LS+DA+D++G+ ++D++ N++K RL+  G  + +E 
Sbjct: 60  VDKSRGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGIPVSSE- 118

Query: 63  LTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAE-----NMIKKVKHAL------- 110
                 + HE  K +      D +D       +  +AE     N  + V+ A        
Sbjct: 119 -----AERHELGKVEVTVFDPDSLDPDRCESCYGAEAEDIKCCNTCEDVREAYRRRGWAF 173

Query: 111 --------------------ESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMI 146
                               +  EGC+VYG L+V +VAGNFH     S    +++V  + 
Sbjct: 174 KNPDTIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQ 233

Query: 147 FGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKD 206
             G  N+N++H I  LSFG  YPGI NPLD T       S  F+Y++K+VPT Y  +  +
Sbjct: 234 SFGLDNINMTHYIQHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGE 293

Query: 207 VLPTNQFSVTEYFSTINEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLG 264
           VL TNQFSVT +    N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++G
Sbjct: 294 VLRTNQFSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIG 353

Query: 265 GTFALTGMLDRWMYRLLEALTK 286
           G F + G++D  +Y    A+ K
Sbjct: 354 GMFTVAGLIDSLIYHSARAIQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Homo sapiens (taxid: 9606)

>sp|Q5R8G3|ERGI3_PONAB Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Pongo abelii GN=ERGIC3 PE=2 SV=1

 Score =  187 bits (474), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/316 (35%), Positives = 171/316 (54%), Gaps = 32/316 (10%)

Query: 3   VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYG------- 55
           VD  RG+ L I+I++ FP +PC  LS+DA+D++G+ ++D++ N++K RL+  G       
Sbjct: 60  VDKSRGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKDGIPVSSEA 119

Query: 56  --HIIGTEYLT---------DLVEKEHEEHKHD-HNKDHKDDIDEKLHAFGFDEDAENMI 103
             H +G   +T         D  E  +     D    +  +D+ E     G+     + I
Sbjct: 120 ERHELGKVEVTVFDPDSLDPDRCESCYGAEAEDIKCCNTCEDVRETYRRRGWAFKNPDTI 179

Query: 104 KKV-------KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKN 152
           ++        K   +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N
Sbjct: 180 EQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDN 239

Query: 153 VNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQ 212
           +N++H I  LSFG  YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL TNQ
Sbjct: 240 INMTHYIQHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQ 299

Query: 213 FSVTEYFSTINEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALT 270
           FSVT +    N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + 
Sbjct: 300 FSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVA 359

Query: 271 GMLDRWMYRLLEALTK 286
           G++D  +Y    A+ K
Sbjct: 360 GLIDSLIYHSARAIQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Pongo abelii (taxid: 9601)

>sp|Q9CQE7|ERGI3_MOUSE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Mus musculus GN=Ergic3 PE=2 SV=1

 Score =  186 bits (472), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/316 (35%), Positives = 172/316 (54%), Gaps = 32/316 (10%)

Query: 3   VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYG------- 55
           VD  RG+ L I+I++ FP +PC  LS+DA+D++G+ ++D++ N++K RL+  G       
Sbjct: 60  VDKSRGDKLKINIDVLFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKKRLDKDGVPVSSEA 119

Query: 56  --HIIGTEYLT-----DLVEKEHEEHKHDHNKDHK-----DDIDEKLHAFGFDEDAENMI 103
             H +G   +T      L     E      ++D K     +D+ E     G+     + I
Sbjct: 120 ERHELGKVEVTVFDPNSLDPNRCESCYGAESEDIKCCNSCEDVREAYRRRGWAFKNPDTI 179

Query: 104 KKV-------KHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKN 152
           ++        K   +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N
Sbjct: 180 EQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDN 239

Query: 153 VNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQ 212
           +N++H I  LSFG  YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL TNQ
Sbjct: 240 INMTHYIKHLSFGEDYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQ 299

Query: 213 FSVTEYFSTINEF--DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALT 270
           FSVT +    N    D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + 
Sbjct: 300 FSVTRHEKVANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVA 359

Query: 271 GMLDRWMYRLLEALTK 286
           G++D  +Y    A+ K
Sbjct: 360 GLIDSLIYHSARAIQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Mus musculus (taxid: 10090)

>sp|Q54DW2|ERGI3_DICDI Probable endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Dictyostelium discoideum GN=ergic3 PE=3 SV=1

 Score =  177 bits (450), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 109/323 (33%), Positives = 175/323 (54%), Gaps = 45/323 (13%)

Query: 3   VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
           VD  RGE L I++++TF  LPC  LS+DA+D+SG+H+ D+  NI+K RL+  G  I    
Sbjct: 59  VDTTRGEKLKINMDITFHHLPCAYLSLDAMDVSGEHQFDVAHNIFKKRLSPTGQPI---- 114

Query: 63  LTDLVEKEHEEHKHDHNKDHKDDI---------------------DEKLHAF---GFDED 98
           +     +E E +K +  KD+ D +                     +E   A+   G+  D
Sbjct: 115 IEAPPIREEEINKKESVKDNNDVVGCGSCYGAEDPSKGIGCCNTCEEVRVAYSKKGWGLD 174

Query: 99  AENMIKKVKHAL------ESGEGCRVYGVLDVQRVAGNFHIS------VHGLNIYVAQMI 146
              + + ++         ++GEGC+VYG + V +VAGNFH +       H ++++  Q  
Sbjct: 175 PSGIPQCIREGFTKNLVEQNGEGCQVYGFILVNKVAGNFHFAPGKSFQQHHMHVHDLQPF 234

Query: 147 FGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKD 206
             G+   NVSH I+ LSFG  +PGI NPLD   +      G F+Y++K+VPT Y  ++ +
Sbjct: 235 KDGS--FNVSHTINRLSFGNDFPGIKNPLDDVTKTEMVGVGMFQYFVKVVPTIYEGLNGN 292

Query: 207 VLPTNQFSVTEYFSTI---NEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVL 263
            + TNQ+SVTE++  +    E     P ++F+YDLSPI + + E  +SF   +T +CA++
Sbjct: 293 RIATNQYSVTEHYRLLAKKGEEPSGLPGLFFMYDLSPIMMKVSERGKSFASFLTNVCAII 352

Query: 264 GGTFALTGMLDRWMYRLLEALTK 286
           GG F + G+ D ++Y   + L K
Sbjct: 353 GGVFTVFGIFDSFIYYSTKNLQK 375

Possible role in transport between endoplasmic reticulum and Golgi.

Dictyostelium discoideum (taxid: 44689)

>sp|Q09895|YAI8_SCHPO Uncharacterized protein C24B11.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.08c PE=3 SV=1

 Score =  124 bits (310), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 154/333 (46%), Gaps = 63/333 (18%)

Query: 3   VDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY 62
           V+   G+ + I+ N+TFP +PC +L+VD +D+SG+ + D+   + K RL+  G II  + 
Sbjct: 60  VNPSHGDRMEINFNITFPRIPCQILTVDVLDVSGEFQRDIHHTVSKTRLSPSGEIISVD- 118

Query: 63  LTDLVEKEHEEHKHDHNKDHKD-----------------------DIDEKLHAFGFDEDA 99
             DL     +    D   +  D                       D   K H    D DA
Sbjct: 119 --DLDIGNQQSISDDGAAECGDCYGAADFAPEDTPGCCNTCDAVRDAYGKAHWRIGDVDA 176

Query: 100 ENMIK----KVKHALESGEGCRVYGVLDVQRVAGNFHIS-----------VHGLNIYVAQ 144
               K    K  +  +  EGC + G L V R+AGNFHI+           VH    Y+ +
Sbjct: 177 FKQCKDENFKELYEAQKVEGCNLAGQLSVNRMAGNFHIAPGRSTQNGNQHVHDTRDYINE 236

Query: 145 MIFGGAKNVNVSHVIHDLSFGPKY-PGIH--NPLDGTVRMLHDTSGTFKYYIKIVPTEYR 201
           +        ++SH IH LSFGP     +H  NPLDGTV+ +      ++Y+IK V  ++ 
Sbjct: 237 LDLH-----DMSHSIHHLSFGPPLDASVHYSNPLDGTVKKVSTADYRYEYFIKCVSYQFM 291

Query: 202 YISKDVLP--TNQFSVTEYFSTIN-----------EFDRTWPAVYFLYDLSPITVTIKEE 248
            +SK  LP  TN+++VT++  +I             F    P V+F +D+SP+ V  ++ 
Sbjct: 292 PLSKSTLPIDTNKYAVTQHERSIRGGREEKVPTHVNFHGGIPGVWFQFDISPMRVIERQV 351

Query: 249 R-RSFLHLITRLCAVLGGTFALTGMLDRWMYRL 280
           R  +F   ++ + A+LGG   L   +DR  Y +
Sbjct: 352 RGNTFGGFLSNVLALLGGCVTLASFVDRGYYEV 384

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	294
356575088	347	PREDICTED: endoplasmic reticulum-Golgi i	0.982	0.832	0.851	1e-146
255637400	347	unknown [Glycine max]	0.982	0.832	0.848	1e-146
224086657	351	predicted protein [Populus trichocarpa]	1.0	0.837	0.867	1e-144
225446891	351	PREDICTED: endoplasmic reticulum-Golgi i	1.0	0.837	0.867	1e-144
30686584	354	Endoplasmic reticulum vesicle transporte	0.989	0.822	0.828	1e-143
297830940	354	hypothetical protein ARALYDRAFT_479742 [	0.982	0.816	0.829	1e-143
224137484	351	predicted protein [Populus trichocarpa]	0.989	0.829	0.855	1e-141
356547537	351	PREDICTED: probable endoplasmic reticulu	0.986	0.826	0.829	1e-141
118482697	366	unknown [Populus trichocarpa]	0.989	0.795	0.813	1e-138
449445069	388	PREDICTED: endoplasmic reticulum-Golgi i	0.979	0.742	0.838	1e-136

>gi|356575088|ref|XP_003555674.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Glycine max]

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 247/290 (85%), Positives = 268/290 (92%), Gaps = 1/290 (0%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           MSVDLKRGETLPIHINMTFP+LPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT
Sbjct: 58  MSVDLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 117

Query: 61  EYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYG 120
           EY++DLVEKEH  HKHD NK+H+   ++K+H    DE  EN+IKKVK AL++GEGCRVYG
Sbjct: 118 EYISDLVEKEHTHHKHDDNKNHEHS-EQKIHLQNLDESTENIIKKVKEALKNGEGCRVYG 176

Query: 121 VLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVR 180
           VLDVQRVAGNFHISVHGLNIYVAQMIF GAKNVNVSH IHDLSFGPKYPG+HNPLD T R
Sbjct: 177 VLDVQRVAGNFHISVHGLNIYVAQMIFDGAKNVNVSHFIHDLSFGPKYPGLHNPLDDTTR 236

Query: 181 MLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSP 240
           +LHDTSGTFKYYIK+VPTEYRYISK+VLPTNQFSV+EY+S IN+FDRTWPAVYFLYDLSP
Sbjct: 237 ILHDTSGTFKYYIKVVPTEYRYISKEVLPTNQFSVSEYYSPINQFDRTWPAVYFLYDLSP 296

Query: 241 ITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSAR 290
           ITVTIKEERRSFLH ITRLCAVLGGTFA+TGMLDRWMYRLLE LTK  ++
Sbjct: 297 ITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMYRLLETLTKSKSK 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637400|gb|ACU19028.1| unknown [Glycine max]

 Score =  522 bits (1344), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 246/290 (84%), Positives = 267/290 (92%), Gaps = 1/290 (0%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           MSVDLKRGETLPIHINMTFP+LPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT
Sbjct: 58  MSVDLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 117

Query: 61  EYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYG 120
           EY++DLVEKEH  HKHD NK+H+   ++K+H    DE  EN+IKKVK AL++GEGCRVYG
Sbjct: 118 EYVSDLVEKEHTHHKHDDNKNHEHS-EQKIHLQNLDESTENIIKKVKEALKNGEGCRVYG 176

Query: 121 VLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVR 180
           VLDVQRVAGNFHISVHGLNIYVAQMIF GAKNVNVSH IHDLSFGPKYPG+HNPLD T R
Sbjct: 177 VLDVQRVAGNFHISVHGLNIYVAQMIFDGAKNVNVSHFIHDLSFGPKYPGLHNPLDDTTR 236

Query: 181 MLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSP 240
           +LHDTSGTFKYYIK+VPTEYRYISK+VLPTNQFSV+EY+S IN+FDRTWPAVYFLYDLSP
Sbjct: 237 ILHDTSGTFKYYIKVVPTEYRYISKEVLPTNQFSVSEYYSPINQFDRTWPAVYFLYDLSP 296

Query: 241 ITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSAR 290
           ITVTIKEERRSF H ITRLCAVLGGTFA+TGMLDRWMYRLLE LTK  ++
Sbjct: 297 ITVTIKEERRSFFHFITRLCAVLGGTFAVTGMLDRWMYRLLETLTKSKSK 346

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224086657|ref|XP_002307923.1| predicted protein [Populus trichocarpa] gi|222853899|gb|EEE91446.1| predicted protein [Populus trichocarpa]

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 255/294 (86%), Positives = 272/294 (92%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           MSVDL RGETLPIHIN+TFP+LPCDVLSVDAIDMSGKHEVDLDT+IWKLRLNSYGHI GT
Sbjct: 58  MSVDLTRGETLPIHINITFPSLPCDVLSVDAIDMSGKHEVDLDTSIWKLRLNSYGHITGT 117

Query: 61  EYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYG 120
           EYL+DLVEKEHE H HDHNKDH +D   K H  GFD+ AE M+KKVK AL +GEGCRVYG
Sbjct: 118 EYLSDLVEKEHEAHNHDHNKDHHEDSHAKQHTHGFDDAAETMVKKVKQALANGEGCRVYG 177

Query: 121 VLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVR 180
           VLDVQRVAGNFHISVHGLNI+VAQMIF GAK+VNVSH+IHDLSFGPKYPGIHNPLDGT R
Sbjct: 178 VLDVQRVAGNFHISVHGLNIFVAQMIFDGAKHVNVSHIIHDLSFGPKYPGIHNPLDGTTR 237

Query: 181 MLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSP 240
           +LH+TSGTFKYYIKIVPTEYRYISK+VLPTNQFSVTEYFS + +FDRTWPAVYFLYDLSP
Sbjct: 238 ILHETSGTFKYYIKIVPTEYRYISKEVLPTNQFSVTEYFSPMTDFDRTWPAVYFLYDLSP 297

Query: 241 ITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARSVLR 294
           ITVTIKEERRSFLH ITRLCAVLGGTFALTGMLDRWM RLLEALTKP+ RSVLR
Sbjct: 298 ITVTIKEERRSFLHFITRLCAVLGGTFALTGMLDRWMCRLLEALTKPNPRSVLR 351

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446891|ref|XP_002284045.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3 [Vitis vinifera] gi|296086333|emb|CBI31774.3| unnamed protein product [Vitis vinifera]

 Score =  515 bits (1327), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 255/294 (86%), Positives = 272/294 (92%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           MSVDLKRGETLPIHINMTFP+LPCDVLSVDAIDMSGKHEVDLDTNIWKLRLN  G IIGT
Sbjct: 58  MSVDLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNRDGFIIGT 117

Query: 61  EYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYG 120
           EYL+DLVEKEH +HKHDHNKDH  D D+KLHA  FD+DAENM+KKVK AL +GEGCRVYG
Sbjct: 118 EYLSDLVEKEHADHKHDHNKDHHGDSDQKLHAHSFDQDAENMVKKVKQALANGEGCRVYG 177

Query: 121 VLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVR 180
           VLDVQRVAGNFHISVHGLNI+VAQMIF GA +VNVSH+IHDLSFGPKYPG+HNPLDGTVR
Sbjct: 178 VLDVQRVAGNFHISVHGLNIFVAQMIFDGAIHVNVSHIIHDLSFGPKYPGLHNPLDGTVR 237

Query: 181 MLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSP 240
           +L   SGTFKYYIKIVPTEYRYISK+VLPTNQFSV EYFS +NEFDRTWPAVYFLYDLSP
Sbjct: 238 ILRGASGTFKYYIKIVPTEYRYISKEVLPTNQFSVMEYFSPMNEFDRTWPAVYFLYDLSP 297

Query: 241 ITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARSVLR 294
           +TVTIKEERRSFLH ITRLCAVLGGTFALTGMLDRWMYR LE LTKP+A+SV R
Sbjct: 298 VTVTIKEERRSFLHFITRLCAVLGGTFALTGMLDRWMYRFLEMLTKPNAKSVYR 351

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30686584|ref|NP_188868.2| Endoplasmic reticulum vesicle transporter protein [Arabidopsis thaliana] gi|13877821|gb|AAK43988.1|AF370173_1 unknown protein [Arabidopsis thaliana] gi|51969000|dbj|BAD43192.1| unknown protein [Arabidopsis thaliana] gi|51970108|dbj|BAD43746.1| unknown protein [Arabidopsis thaliana] gi|51970556|dbj|BAD43970.1| unknown protein [Arabidopsis thaliana] gi|51970734|dbj|BAD44059.1| unknown protein [Arabidopsis thaliana] gi|62319967|dbj|BAD94071.1| hypothetical protein [Arabidopsis thaliana] gi|332643097|gb|AEE76618.1| Endoplasmic reticulum vesicle transporter protein [Arabidopsis thaliana]

 Score =  512 bits (1319), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 246/297 (82%), Positives = 269/297 (90%), Gaps = 6/297 (2%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           MSVDLKRGETLPIH+NMTFP+LPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNS+GHIIGT
Sbjct: 58  MSVDLKRGETLPIHVNMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSHGHIIGT 117

Query: 61  EYLTDLVEKEHEE----HKHDHNKDHKDDID-EKLHAFGFDEDAENMIKKVKHALESGEG 115
           EY++DLVEK HE     HKHD  ++HK++ + E L+  GFD+ AE MIKKVK AL  GEG
Sbjct: 118 EYISDLVEKGHEHGHSPHKHDGKEEHKNETETEALNILGFDQAAETMIKKVKQALADGEG 177

Query: 116 CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPL 175
           CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGG+KNVNVSH+IHDLSFGPKYPGIHNPL
Sbjct: 178 CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGSKNVNVSHMIHDLSFGPKYPGIHNPL 237

Query: 176 DGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFL 235
           D T R+LHDTSGTFKYYIKIVPTEYRY+SKDVL TNQ+SVTEYF+ + EFDRTWPAVYFL
Sbjct: 238 DDTNRILHDTSGTFKYYIKIVPTEYRYLSKDVLSTNQYSVTEYFTPMTEFDRTWPAVYFL 297

Query: 236 YDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALT-KPSARS 291
           YDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWM+R +E+   KPS R+
Sbjct: 298 YDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMFRFIESFNKKPSTRA 354

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830940|ref|XP_002883352.1| hypothetical protein ARALYDRAFT_479742 [Arabidopsis lyrata subsp. lyrata] gi|297329192|gb|EFH59611.1| hypothetical protein ARALYDRAFT_479742 [Arabidopsis lyrata subsp. lyrata]

 Score =  512 bits (1318), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 244/294 (82%), Positives = 268/294 (91%), Gaps = 5/294 (1%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           MSVDLKRGETLPIH+NMTFP+LPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNS+GHIIGT
Sbjct: 58  MSVDLKRGETLPIHVNMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSHGHIIGT 117

Query: 61  EYLTDLVEKEHEE----HKHDHNKDHKDDID-EKLHAFGFDEDAENMIKKVKHALESGEG 115
           EY++DLVEK HE     HKHD  ++HK++ + E L+  GFD+ AE MIKKVK AL  GEG
Sbjct: 118 EYISDLVEKGHEHGHSPHKHDGKEEHKNETETEALNILGFDQAAETMIKKVKQALADGEG 177

Query: 116 CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPL 175
           CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGG+KNVNVSH+IHDLSFGPKYPGIHNPL
Sbjct: 178 CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGSKNVNVSHMIHDLSFGPKYPGIHNPL 237

Query: 176 DGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFL 235
           D T R+LHDTSGTFKYYIKIVPTEYRY+SKDVL TNQ+SVTEY++ + EFDRTWPAVYFL
Sbjct: 238 DDTNRILHDTSGTFKYYIKIVPTEYRYLSKDVLSTNQYSVTEYYTPMTEFDRTWPAVYFL 297

Query: 236 YDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSA 289
           YDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWM+RL+E+  K S+
Sbjct: 298 YDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMFRLIESFNKKSS 351

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137484|ref|XP_002322569.1| predicted protein [Populus trichocarpa] gi|222867199|gb|EEF04330.1| predicted protein [Populus trichocarpa]

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 249/291 (85%), Positives = 267/291 (91%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           MSVDL+RGE LPIH+N+TFP+LPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNS+GHI GT
Sbjct: 58  MSVDLQRGEILPIHVNITFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSHGHITGT 117

Query: 61  EYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYG 120
           EYL+DLVEKEHE H HDH+KDH  D  E+ H  GFD+ AE MIKKVK AL +GEGCRVYG
Sbjct: 118 EYLSDLVEKEHEAHNHDHDKDHHKDSHEEQHTHGFDDAAETMIKKVKQALANGEGCRVYG 177

Query: 121 VLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVR 180
           VLDVQRVAGNFHISVHGLNI+VAQMIF GAK+VNVSH+IHDLSFGPKYPGIHNPLDGT R
Sbjct: 178 VLDVQRVAGNFHISVHGLNIFVAQMIFDGAKHVNVSHIIHDLSFGPKYPGIHNPLDGTAR 237

Query: 181 MLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSP 240
           +L +TSG FKYYIKIVPTEYRYISKDVLPTNQFSVTEYFS I +FDRTWPAVYFLYDLSP
Sbjct: 238 ILRETSGIFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSPITDFDRTWPAVYFLYDLSP 297

Query: 241 ITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARS 291
           ITVTIKEERRSFLH ITRLCA+LGGTFALTGMLDRWMYRLLEALTKP+  S
Sbjct: 298 ITVTIKEERRSFLHFITRLCAILGGTFALTGMLDRWMYRLLEALTKPNRGS 348

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547537|ref|XP_003542168.1| PREDICTED: probable endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Glycine max]

 Score =  506 bits (1304), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 243/293 (82%), Positives = 265/293 (90%), Gaps = 3/293 (1%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           MSVDLKRGETLPIHINMTFP+LPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT
Sbjct: 58  MSVDLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 117

Query: 61  EYLTDLVEKEH---EEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCR 117
           EY++DLVEKEH   E   +  +  H +  ++K+H    DE  EN+IKKVK AL++GEGCR
Sbjct: 118 EYISDLVEKEHTNQEHDDNKDHDHHHEHSEQKIHLQNLDESTENIIKKVKEALKNGEGCR 177

Query: 118 VYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDG 177
           VYGVLDVQRVAGNFHISVHGLNIYVAQMIF GAKNVNVSH IHDLSFGPKYPG+HNPLD 
Sbjct: 178 VYGVLDVQRVAGNFHISVHGLNIYVAQMIFDGAKNVNVSHFIHDLSFGPKYPGLHNPLDD 237

Query: 178 TVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYD 237
           T R+LHDTSGTFKYYIK+VPTEYRYISK+VLPTNQFSV+EY+S IN+FDRTWPAVYFLYD
Sbjct: 238 TTRILHDTSGTFKYYIKVVPTEYRYISKEVLPTNQFSVSEYYSPINQFDRTWPAVYFLYD 297

Query: 238 LSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSAR 290
           LSPITVTIKEERRSFLH ITRLCAVLGGTFA+TGMLDRWMYRLLEALTK  ++
Sbjct: 298 LSPITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMYRLLEALTKSKSK 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118482697|gb|ABK93267.1| unknown [Populus trichocarpa]

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 249/306 (81%), Positives = 267/306 (87%), Gaps = 15/306 (4%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWK------------ 48
           MSVDL+RGE LPIH+N+TFP+LPCDVLSVDAIDMSGKHEVDLDTNIWK            
Sbjct: 58  MSVDLQRGEILPIHVNITFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKKLLFGMLLTRIE 117

Query: 49  ---LRLNSYGHIIGTEYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKK 105
              LRLNS+GHI GTEYL+DLVEKEHE H HDH+KDH  D  E+ H  GFD+ AE MIKK
Sbjct: 118 FLQLRLNSHGHITGTEYLSDLVEKEHEAHNHDHDKDHHKDSHEEQHTHGFDDAAETMIKK 177

Query: 106 VKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFG 165
           VK AL +GEGCRVYGVLDVQRVAGNFHISVHGLNI+VAQMIF GAK+VNVSH+IHDLSFG
Sbjct: 178 VKQALANGEGCRVYGVLDVQRVAGNFHISVHGLNIFVAQMIFDGAKHVNVSHIIHDLSFG 237

Query: 166 PKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF 225
           PKYPGIHNPLDGT R+L +TSG FKYYIKIVPTEYRYISKDVLPTNQFSVTEYFS I +F
Sbjct: 238 PKYPGIHNPLDGTARILRETSGIFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSPITDF 297

Query: 226 DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALT 285
           DRTWPAVYFLYDLSPITVTIKEERRSFLH ITRLCA+LGGTFALTGMLDRWMYRLLEALT
Sbjct: 298 DRTWPAVYFLYDLSPITVTIKEERRSFLHFITRLCAILGGTFALTGMLDRWMYRLLEALT 357

Query: 286 KPSARS 291
           KP+  S
Sbjct: 358 KPNRGS 363

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445069|ref|XP_004140296.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Cucumis sativus]

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 244/291 (83%), Positives = 266/291 (91%), Gaps = 3/291 (1%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
           MSVDLKRGETLPIHINMTFP+LPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNS+G IIGT
Sbjct: 100 MSVDLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSHGQIIGT 159

Query: 61  EYLTDLVEKEHEEHKHDHNKDHKDDIDEKLHAFGFDEDAENMIKKVKHALESGEGCRVYG 120
           EYL+DLVEKEH +HKHDH+ D + D     H  GFD+ AEN++KKVK ALE  +GCRVYG
Sbjct: 160 EYLSDLVEKEHVDHKHDHDHDKEKDHP---HIHGFDQAAENLVKKVKQALEEAQGCRVYG 216

Query: 121 VLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVR 180
           VLDVQRVAGNFHISVHGLNI+VAQMIFGG+K+VNVSH+IHDLSFGPKYPGIHNPLDGTVR
Sbjct: 217 VLDVQRVAGNFHISVHGLNIFVAQMIFGGSKHVNVSHMIHDLSFGPKYPGIHNPLDGTVR 276

Query: 181 MLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFLYDLSP 240
           +L DTSGTFKYYIKIVPTEY+YISK VLPTNQFSVTEYFS + + DR+WPAVYFLYDLSP
Sbjct: 277 ILRDTSGTFKYYIKIVPTEYKYISKAVLPTNQFSVTEYFSPMTDSDRSWPAVYFLYDLSP 336

Query: 241 ITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPSARS 291
           ITVTIKEERRSFLH ITRLCAVLGGTFA+TGMLDRWM+R LEALTKP  R+
Sbjct: 337 ITVTIKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMFRFLEALTKPKRRT 387

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	294
TAIR|locus:2087817	354	AT3G22290 "AT3G22290" [Arabido	0.989	0.822	0.791	1.1e-124
TAIR|locus:2034330	489	AT1G36050 "AT1G36050" [Arabido	0.625	0.376	0.409	2e-49
UNIPROTKB|Q5EAE0	383	ERGIC3 "Endoplasmic reticulum-	0.598	0.459	0.423	1.1e-48
TAIR|locus:2015056	386	AT1G22200 "AT1G22200" [Arabido	0.625	0.476	0.409	1.4e-48
UNIPROTKB|Q9Y282	383	ERGIC3 "Endoplasmic reticulum-	0.598	0.459	0.423	6e-48
MGI|MGI:1913616	383	Ergic3 "ERGIC and golgi 3" [Mu	0.598	0.459	0.423	7.7e-48
ZFIN|ZDB-GENE-040426-795	383	ergic3 "ERGIC and golgi 3" [Da	0.598	0.459	0.417	6.8e-47
DICTYBASE|DDB_G0292002	383	ergic3 "endoplasmic reticulum-	0.591	0.454	0.383	2.9e-44
FB|FBgn0036489	373	CG7011 [Drosophila melanogaste	0.581	0.458	0.394	2.1e-34
WB|WBGene00010725	380	erv-46 [Caenorhabditis elegans	0.595	0.460	0.355	1.5e-33

TAIR|locus:2087817 AT3G22290 "AT3G22290" [Arabidopsis thaliana (taxid:3702)]

 Score = 1225 (436.3 bits), Expect = 1.1e-124, P = 1.1e-124
 Identities = 235/297 (79%), Positives = 253/297 (85%)

Query:     1 MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGT 60
             MSVDLKRGETLPIH+NMTFP+LPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNS+GHIIGT
Sbjct:    58 MSVDLKRGETLPIHVNMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSHGHIIGT 117

Query:    61 EYLTDLVXXXXXXXXX-----XXXXXXXXXXXXXLHAFGFDEDAENMIKKVKHALESGEG 115
             EY++DLV                           L+  GFD+ AE MIKKVK AL  GEG
Sbjct:   118 EYISDLVEKGHEHGHSPHKHDGKEEHKNETETEALNILGFDQAAETMIKKVKQALADGEG 177

Query:   116 CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPL 175
             CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGG+KNVNVSH+IHDLSFGPKYPGIHNPL
Sbjct:   178 CRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGSKNVNVSHMIHDLSFGPKYPGIHNPL 237

Query:   176 DGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEFDRTWPAVYFL 235
             D T R+LHDTSGTFKYYIKIVPTEYRY+SKDVL TNQ+SVTEYF+ + EFDRTWPAVYFL
Sbjct:   238 DDTNRILHDTSGTFKYYIKIVPTEYRYLSKDVLSTNQYSVTEYFTPMTEFDRTWPAVYFL 297

Query:   236 YDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK-PSARS 291
             YDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWM+R +E+  K PS R+
Sbjct:   298 YDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMFRFIESFNKKPSTRA 354

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

TAIR|locus:2034330 AT1G36050 "AT1G36050" [Arabidopsis thaliana (taxid:3702)]

 Score = 386 (140.9 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
 Identities = 79/193 (40%), Positives = 120/193 (62%)

Query:   100 ENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNV 155
             E  +++VK   E GEGC +YG L+V +VAGNFH     S H   ++V  ++     + N+
Sbjct:   189 EGFLQRVKD--EEGEGCNIYGFLEVNKVAGNFHFAPGKSFHQSGVHVHDLLAFQKDSFNI 246

Query:   156 SHVIHDLSFGPKYPGIHNPLDGTVRMLHDT-SGTFKYYIKIVPTEYRYISKDVLPTNQFS 214
             SH I+ L++G  +PG+ NPLD  V    DT +  ++Y+IK+VPT Y  I    + +NQFS
Sbjct:   247 SHKINRLTYGDYFPGVVNPLD-KVEWSQDTPNAMYQYFIKVVPTVYTDIRGHTIQSNQFS 305

Query:   215 VTEYFSTINEFD-RTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 273
             VTE+  +      ++ P V+F YDLSPI VT  EE  SFLH +T +CA++GG F ++G++
Sbjct:   306 VTEHVKSSEAGQLQSLPGVFFFYDLSPIKVTFTEEHISFLHFLTNVCAIVGGVFTVSGII 365

Query:   274 DRWMYRLLEALTK 286
             D ++Y   +A+ K
Sbjct:   366 DAFIYHGQKAIKK 378

GO:0003674 "molecular_function" evidence=ND

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

UNIPROTKB|Q5EAE0 ERGIC3 "Endoplasmic reticulum-Golgi intermediate compartment protein 3" [Bos taurus (taxid:9913)]

 Score = 384 (140.2 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
 Identities = 77/182 (42%), Positives = 110/182 (60%)

Query:   111 ESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGP 166
             +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG 
Sbjct:   194 QKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIRHLSFGE 253

Query:   167 KYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF- 225
              YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL TNQFSVT +    N   
Sbjct:   254 DYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLM 313

Query:   226 -DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEAL 284
              D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y    A+
Sbjct:   314 GDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAI 373

Query:   285 TK 286
              K
Sbjct:   374 QK 375

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2015056 AT1G22200 "AT1G22200" [Arabidopsis thaliana (taxid:3702)]

 Score = 385 (140.6 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
 Identities = 79/193 (40%), Positives = 117/193 (60%)

Query:   100 ENMIKKVKHALESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNV 155
             E  ++KVK   E GEGC V+G L+V +VAGNFH     S H        M+     N N+
Sbjct:   189 EGFVQKVKD--EEGEGCNVHGFLEVNKVAGNFHFIPGQSFHQSGFQFHDMLLFQQGNYNI 246

Query:   156 SHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSV 215
             SH ++ L+FG  +PG+ NPLDG        SG ++Y+IK+VP+ Y  + ++ + +NQFSV
Sbjct:   247 SHKVNRLAFGDFFPGVVNPLDGVQWNQGKQSGVYQYFIKVVPSIYTDVHQNTIQSNQFSV 306

Query:   216 TEYFSTINEFDRTW--PAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGML 273
             TE+F  + E  R    P V+F YDLSPI V  +E+   FLH +T +CA++GG F ++G++
Sbjct:   307 TEHFQNM-EAGRMQSPPGVFFYYDLSPIKVIFEEQHVEFLHFLTNVCAIVGGIFTVSGIV 365

Query:   274 DRWMYRLLEALTK 286
             D ++Y    A+ K
Sbjct:   366 DSFIYHGQRAIKK 378

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006626 "protein targeting to mitochondrion" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

UNIPROTKB|Q9Y282 ERGIC3 "Endoplasmic reticulum-Golgi intermediate compartment protein 3" [Homo sapiens (taxid:9606)]

 Score = 384 (140.2 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
 Identities = 77/182 (42%), Positives = 110/182 (60%)

Query:   111 ESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGP 166
             +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG 
Sbjct:   194 QKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIQHLSFGE 253

Query:   167 KYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF- 225
              YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL TNQFSVT +    N   
Sbjct:   254 DYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLL 313

Query:   226 -DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEAL 284
              D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y    A+
Sbjct:   314 GDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAI 373

Query:   285 TK 286
              K
Sbjct:   374 QK 375

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

MGI|MGI:1913616 Ergic3 "ERGIC and golgi 3" [Mus musculus (taxid:10090)]

 Score = 383 (139.9 bits), Expect = 7.7e-48, Sum P(2) = 7.7e-48
 Identities = 77/182 (42%), Positives = 110/182 (60%)

Query:   111 ESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGP 166
             +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG 
Sbjct:   194 QKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIKHLSFGE 253

Query:   167 KYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF- 225
              YPGI NPLD T       S  F+Y++K+VPT Y  +  +VL TNQFSVT +    N   
Sbjct:   254 DYPGIVNPLDHTNVTAPQASMMFQYFVKVVPTVYMKVDGEVLRTNQFSVTRHEKVANGLL 313

Query:   226 -DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEAL 284
              D+  P V+ LY+LSP+ V + E+ RSF H +T +CA++GG F + G++D  +Y    A+
Sbjct:   314 GDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIIGGMFTVAGLIDSLIYHSARAI 373

Query:   285 TK 286
              K
Sbjct:   374 QK 375

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

ZFIN|ZDB-GENE-040426-795 ergic3 "ERGIC and golgi 3" [Danio rerio (taxid:7955)]

 Score = 369 (135.0 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
 Identities = 76/182 (41%), Positives = 109/182 (59%)

Query:   111 ESGEGCRVYGVLDVQRVAGNFHI----SVHGLNIYVAQMIFGGAKNVNVSHVIHDLSFGP 166
             +  EGC+VYG L+V +VAGNFH     S    +++V  +   G  N+N++H I  LSFG 
Sbjct:   194 QKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHFIKHLSFGK 253

Query:   167 KYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTINEF- 225
              YPGI NPLD T       S  ++Y++KIVPT Y     +V+ TNQFSVT +    N   
Sbjct:   254 DYPGIVNPLDDTNVAAPQASMMYQYFVKIVPTIYVKGDGEVVKTNQFSVTRHEKIANGLI 313

Query:   226 -DRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEAL 284
              D+  P V+ LY+LSP+ V   E++RSF H +T +CA++GG F + G++D  +Y    A+
Sbjct:   314 GDQGLPGVFVLYELSPMMVKFTEKQRSFTHFLTGVCAIIGGVFTVAGLIDSLIYHSARAI 373

Query:   285 TK 286
              K
Sbjct:   374 QK 375

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

DICTYBASE|DDB_G0292002 ergic3 "endoplasmic reticulum-golgi intermediate compartment protein 3" [Dictyostelium discoideum (taxid:44689)]

 Score = 347 (127.2 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
 Identities = 71/185 (38%), Positives = 112/185 (60%)

Query:   111 ESGEGCRVYGVLDVQRVAGNFHISV------HGLNIYVAQMIFGGAKNVNVSHVIHDLSF 164
             ++GEGC+VYG + V +VAGNFH +       H ++++  Q    G+   NVSH I+ LSF
Sbjct:   193 QNGEGCQVYGFILVNKVAGNFHFAPGKSFQQHHMHVHDLQPFKDGS--FNVSHTINRLSF 250

Query:   165 GPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTI-- 222
             G  +PGI NPLD   +      G F+Y++K+VPT Y  ++ + + TNQ+SVTE++  +  
Sbjct:   251 GNDFPGIKNPLDDVTKTEMVGVGMFQYFVKVVPTIYEGLNGNRIATNQYSVTEHYRLLAK 310

Query:   223 -NEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLL 281
               E     P ++F+YDLSPI + + E  +SF   +T +CA++GG F + G+ D ++Y   
Sbjct:   311 KGEEPSGLPGLFFMYDLSPIMMKVSERGKSFASFLTNVCAIIGGVFTVFGIFDSFIYYST 370

Query:   282 EALTK 286
             + L K
Sbjct:   371 KNLQK 375

GO:0003674 "molecular_function" evidence=ND

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0033116 "endoplasmic reticulum-Golgi intermediate compartment membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

FB|FBgn0036489 CG7011 [Drosophila melanogaster (taxid:7227)]

 Score = 300 (110.7 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
 Identities = 71/180 (39%), Positives = 101/180 (56%)

Query:   114 EGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIFGGAK--NVNVSHVIHDLSFGPK--YP 169
             EGCR+ G L+V R+AG+FH +  G +  + Q      +  NV +SH I+ LSFG K  + 
Sbjct:   188 EGCRIQGHLEVNRMAGSFHFAP-GKSFSIRQFHIHDFQFSNVKLSHTINHLSFGEKIEFA 246

Query:   170 GIHNPLDGT-VRMLHDTSGTFKYYIKIVPTEYRYISKDVLP--TNQFSVTEYFSTINEFD 226
               H PLDG  V +    S  F YY+KIVPT Y   + D  P  TNQFSVT Y   +++ +
Sbjct:   247 KTH-PLDGLRVDVAETKSEMFNYYLKIVPTLYMRGNSDGEPIYTNQFSVTRYRKDLSDRE 305

Query:   227 RTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTK 286
             R  P ++F Y+LSP+ V   E   SF H  T  C+++GG F + G+L   +    EA+ +
Sbjct:   306 RGMPGIFFSYELSPLMVKYAERHSSFGHFATNCCSIIGGVFTVAGILAVLLNNSWEAIQR 365

GO:0030134 "ER to Golgi transport vesicle" evidence=ISS

WB|WBGene00010725 erv-46 [Caenorhabditis elegans (taxid:6239)]

 Score = 289 (106.8 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
 Identities = 64/180 (35%), Positives = 99/180 (55%)

Query:   104 KKVKHALE-SGEGCRVYGVLDVQRVAGNFHISV---H-GLNIYVAQMIFGGAKNVNVSHV 158
             K VK   E   EGCRVYG + V +VAGNFH++    H  +  +V  +        + SH 
Sbjct:   185 KWVKEFNEHKNEGCRVYGTVKVAKVAGNFHLAPGDPHQAMRSHVHDLHNLDPVKFDASHT 244

Query:   159 IHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEY 218
             ++ +SFG  +PG + PLDG V   +     ++YY+K+VPT Y Y+   V  ++QFSVT +
Sbjct:   245 VNHVSFGKSFPGKNYPLDGKVNTDNRGGIMYQYYVKVVPTRYDYLDGRVDQSHQFSVTTH 304

Query:   219 FSTINEFDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMY 278
                +       P  +  Y+ SP+ V  +E R+SF   +  LCA++GG FA+  ++D  +Y
Sbjct:   305 KKDLGFRQSGLPGFFLQYEFSPLMVQYEEFRQSFASFLVSLCAIVGGVFAMAQLVDITIY 364

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_VI0206 hypothetical protein (351 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	294
pfam07970	222	pfam07970, COPIIcoated_ERV, Endoplasmic reticulum	8e-57
pfam13850	105	pfam13850, ERGIC_N, Endoplasmic Reticulum-Golgi In	7e-21

>gnl|CDD|219673 pfam07970, COPIIcoated_ERV, Endoplasmic reticulum vesicle transporter

 Score =  182 bits (463), Expect = 8e-57
 Identities = 72/180 (40%), Positives = 103/180 (57%), Gaps = 10/180 (5%)

Query: 104 KKVKHALESGEGCRVYGVLDVQRVAGNFHISVHGLNIYVAQMIF-----GGAKNVNVSHV 158
           +K+K    S EGCRV G L+V RVAGNFHI+  G +                + +N SH 
Sbjct: 44  EKLKAQKNSNEGCRVKGTLEVNRVAGNFHIA-PGRSFQEKGGHVHDLSLFTDEKLNFSHT 102

Query: 159 IHDLSFGPKYP-GIHNPLDGT--VRMLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSV 215
           I+ LSFG ++P G+ NPLDGT            + Y++K+VPT Y  ++  ++ TNQ+SV
Sbjct: 103 INHLSFGEEFPGGVTNPLDGTTKFVQTDKGYHMYSYFLKVVPTRYESLNGLIVETNQYSV 162

Query: 216 TEYFSTINE-FDRTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLD 274
           T +   +        P V+F YD SPI V   E+R+SF H +T LCA++GG FA+ G++D
Sbjct: 163 TSHDRPVTGGSRGGVPGVFFNYDFSPIKVINTEDRQSFSHFLTNLCAIIGGVFAVAGLID 222

This family is conserved from plants and fungi to humans. Erv46 works in close conjunction with Erv41 and together they form a complex which cycles between the endoplasmic reticulum and Golgi complex. Erv46-41 interacts strongly with the endoplasmic reticulum glucosidase II. Mammalian glucosidase II comprises a catalytic alpha-subunit and a 58 kDa beta subunit, which is required for ER localisation. All proteins identified biochemically as Erv41p-Erv46p interactors are localised to the early secretory pathway and are involved in protein maturation and processing in the ER and/or sorting into COPII vesicles for transport to the Golgi. Length = 222

>gnl|CDD|206021 pfam13850, ERGIC_N, Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)

 Score = 84.9 bits (211), Expect = 7e-21
 Identities = 28/53 (52%), Positives = 43/53 (81%)

Query: 1   MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNS 53
           + VD  RGE L I++++TFP LPCD+LS+D +D+SG+H++D++ NI K RL+S
Sbjct: 53  LVVDTSRGEKLRINLDITFPRLPCDLLSLDVMDVSGEHQLDVEHNIKKTRLDS 105

This family is the N-terminal of ERGIC proteins, ER-Golgi intermediate compartment clusters, otherwise known as Ervs, and is associated with family COPIIcoated_ERV, pfam07970. Length = 105

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	294
KOG2667	379	consensus COPII vesicle protein [Intracellular tra	100.0
PF07970	222	COPIIcoated_ERV: Endoplasmic reticulum vesicle tra	100.0
PF13850	96	ERGIC_N: Endoplasmic Reticulum-Golgi Intermediate	99.44

>KOG2667 consensus COPII vesicle protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.1e-75  Score=549.42  Aligned_cols=289  Identities=39%  Similarity=0.657  Sum_probs=226.2

Q ss_pred             CeecCCCCCeeeEEEEEEeCccCCCeeeeeeEecCCCeeeeccCceEEEeecCCCceecccc-----------cchhhhh
Q 022650            1 MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEY-----------LTDLVEK   69 (294)
Q Consensus         1 l~VD~~~~~~l~In~DItfp~~PC~~l~lDv~D~~G~~~~~~~~~i~k~rld~~g~~i~~~~-----------~~~~~~~   69 (294)
                      ++||.+++++|+||||||||+|||++|+|||+|.+|+++++++++|+|.|+|+  +++....           .......
T Consensus        58 ~~vd~s~~e~l~in~DItfp~lpC~~lsVDv~D~sg~~~l~i~~~i~k~rl~~--~~i~~~~~~~~~~~~k~~~p~~~~~  135 (379)
T KOG2667|consen   58 LFVDDSRDEKLQINFDITFPALPCSILSVDVMDVSGEMVLDIDHLIYKLRLDP--EPIPLTIRRFDIFQHKQTIPTTDPI  135 (379)
T ss_pred             EEEeCCCCceeeeeeeEEeccCccceEEEEeeccccccccchhhhhhhcccCc--cccccchhhhcccccccccCCCCcc
Confidence            57999999999999999999999999999999999999999999999999998  3332100           0000001


Q ss_pred             hcccc-cCC------CC--CCchhhH---HhhhcccCCCChhHHHHH---HhhhhccCCCceEEEEEEEEEeeeeEEEEE
Q 022650           70 EHEEH-KHD------HN--KDHKDDI---DEKLHAFGFDEDAENMIK---KVKHALESGEGCRVYGVLDVQRVAGNFHIS  134 (294)
Q Consensus        70 ~~~~~-~~~------~~--~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~~~~egCri~G~l~VnkV~GnfhI~  134 (294)
                      .|..+ +.+      ..  ..|+++.   +.++|++......+++..   ..+.+...+|||||+|++.||||||||||+
T Consensus       136 ~c~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~g~~~~~~~~~~q~~~~~~~~~~~~~~geGCRi~G~l~VNKVaGnfHia  215 (379)
T KOG2667|consen  136 LCGLCYGAEDFNDGDIDCCNLCEDVREAYRKAGWDFADEDLIDQCKNEGFTNKAAEQKGEGCRIYGQLEVNKVAGNFHIA  215 (379)
T ss_pred             chhhhhhhhccccccchhhhcchHHHHHhhhccccccCccchhhhcccccccccCCCCCCceEEEEEEEEeeecceEEEc
Confidence            11111 111      11  2233332   234454443222222211   112233579999999999999999999999


Q ss_pred             EcCCc----ccceeehhcCCcccceeEEEEEeeeCCCCCCCCCCCCCceeeecCCceeeEEEEEEEEEEEEecCcceeee
Q 022650          135 VHGLN----IYVAQMIFGGAKNVNVSHVIHDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKIVPTEYRYISKDVLPT  210 (294)
Q Consensus       135 ~~~~~----~~~~~~~~~~~~~~N~sH~I~~lsFG~~~~g~~nPLdg~~~~~~~~~~~~~Y~lkvVPT~y~~~~~~~~~t  210 (294)
                      ++...    .+.++...  ...+||||+|||||||+.+|+..|||||+...+.+...+|+||+|||||.|.+..+.++.|
T Consensus       216 ~g~~~~~~~~h~hd~~~--~~~~n~SH~InhLSFG~~~p~~~nPLdG~~~~~~~~~~~~~Yf~KvVPT~y~~~~~~~~~T  293 (379)
T KOG2667|consen  216 PGKSSQHSNAHVHDLSL--LDNLNFSHRINHLSFGEYIPGIVNPLDGTNFIANEHLTTFQYFLKVVPTVYKYKSGRVIDT  293 (379)
T ss_pred             cCCCccccccccchhhh--cccCCceEEEeeeccCCCCcccccCCCCccccccCCccceeeEEEEcceEEEeecCceecc
Confidence            75321    11221110  1469999999999999999999999999988888999999999999999999989999999


Q ss_pred             eceEEEEEEEeecC-CCC-CcceEEEEEEccceEEEEEeeeccHHHHHHHHhhhhcceeehhhhhHHHHHHHHHHHcCcc
Q 022650          211 NQFSVTEYFSTINE-FDR-TWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLDRWMYRLLEALTKPS  288 (294)
Q Consensus       211 ~qySvt~~~~~~~~-~~~-~~PgI~F~Yd~sPi~v~~~~~r~~~~~fl~~lcaIiGGvftv~~~id~~~~~~~~~~~k~~  288 (294)
                      ||||||+|.+.... ..+ ++|||||+||+|||+|+++|+|+||+||||+|||||||||||||+||+++|++.+.++++.
T Consensus       294 ~QysVt~~~~~~~~~~~~~~~PGifF~YelSPl~V~v~E~r~sf~~Flt~lCAIiGGvftvagiid~~~~~~~~~i~~k~  373 (379)
T KOG2667|consen  294 NQYSVTEYEYVLHSHRAKSGIPGIFFKYELSPLMVKVTEERQSFSHFLTRLCAIIGGVFTVAGILDSLLYHILELIKGKI  373 (379)
T ss_pred             eeeeeeeeEEeccccccccCCCeEEEEEecCceEEEEEeccccHHHHHHHHHHHhcceeehHHHHHHHHHHHHHHHhcch
Confidence            99999999988873 333 7999999999999999999999999999999999999999999999999999999999888


Q ss_pred             ccCcC
Q 022650          289 ARSVL  293 (294)
Q Consensus       289 ~~~~~  293 (294)
                      +.+|+
T Consensus       374 ~~gk~  378 (379)
T KOG2667|consen  374 ALGKY  378 (379)
T ss_pred             hhhcc
Confidence            88775

>PF07970 COPIIcoated_ERV: Endoplasmic reticulum vesicle transporter ; InterPro: IPR012936 This domain occurs in many hypothetical proteins, and also two partially characterised proteins

Probab=100.00  E-value=4.1e-58  Score=409.90  Aligned_cols=197  Identities=39%  Similarity=0.668  Sum_probs=162.6

Q ss_pred             CCCCchhhHH---hhhcccCCCChhHHHHHHh----hhhccCCCceEEEEEEEEEeeeeEEEEEEcCCc----ccceeeh
Q 022650           78 HNKDHKDDID---EKLHAFGFDEDAENMIKKV----KHALESGEGCRVYGVLDVQRVAGNFHISVHGLN----IYVAQMI  146 (294)
Q Consensus        78 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~~~egCri~G~l~VnkV~GnfhI~~~~~~----~~~~~~~  146 (294)
                      ++++|+|+..   .++|++...+.+|||.++.    +.....+|||||+|++.||||+|||||+++...    .+.+...
T Consensus        11 CCnTC~~V~~ay~~~~w~~~~~~~~eQC~~~~~~~~~~~~~~~egCri~G~l~VnkV~Gnfhi~~g~~~~~~~~h~hd~~   90 (222)
T PF07970_consen   11 CCNTCEDVREAYRKKGWAFPDLENIEQCRREYVKKIKEQVNEGEGCRIYGSLEVNKVPGNFHIAPGRSFQQDGGHIHDLS   90 (222)
T ss_pred             cCcCHHHHHHHHHHhCCCCCCccccccccchhhhhhhhhccCCCCCEEEEEEEEEEEEEEEEEEecchhccCCcceeehh
Confidence            3445677653   3556554445667766542    334456899999999999999999999997632    1222222


Q ss_pred             hcCCc-ccceeEEEEEeeeCCCCCCCCCCCCCcee--eecCCceeeEEEEEEEEEEEEecCcceeeeeceEEEEEEEeec
Q 022650          147 FGGAK-NVNVSHVIHDLSFGPKYPGIHNPLDGTVR--MLHDTSGTFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSTIN  223 (294)
Q Consensus       147 ~~~~~-~~N~sH~I~~lsFG~~~~g~~nPLdg~~~--~~~~~~~~~~Y~lkvVPT~y~~~~~~~~~t~qySvt~~~~~~~  223 (294)
                      ..... .+|+||+|||||||+++|+..|||||+.+  ..+....+|+||||||||+|..+++..++|||||||++.+.+.
T Consensus        91 ~~~~~~~~N~SH~I~~lsFG~~~~~~~~PLdg~~~~~~~~~~~~~~~YflkvVPT~y~~~~~~~~~t~qYsvt~~~~~~~  170 (222)
T PF07970_consen   91 PFDDEPKFNFSHTINHLSFGEEIPGIVNPLDGTQKIVQTDNGNYMYQYFLKVVPTTYEDLDGFSIETYQYSVTEHSRPLN  170 (222)
T ss_pred             hhccccCCCCCeEEEEEEeccccccccccccCccccccCCCCceeEEEEEEEeeeeeEeccccccccccccceeeeeecc
Confidence            22222 79999999999999999999999999988  4577889999999999999999888767999999999999988


Q ss_pred             CCC-CCcceEEEEEEccceEEEEEeeeccHHHHHHHHhhhhcceeehhhhhH
Q 022650          224 EFD-RTWPAVYFLYDLSPITVTIKEERRSFLHLITRLCAVLGGTFALTGMLD  274 (294)
Q Consensus       224 ~~~-~~~PgI~F~Yd~sPi~v~~~~~r~~~~~fl~~lcaIiGGvftv~~~id  274 (294)
                      ... .++|||||+||||||+|+++++|+||+||||+||||||||||++||||
T Consensus       171 ~~~~~~~PGI~F~Yd~SPi~v~~~~~r~s~~~flt~lcaIiGGvftv~gliD  222 (222)
T PF07970_consen  171 GGSSGGLPGIFFKYDFSPIMVVITEDRKSFLHFLTRLCAIIGGVFTVAGLID  222 (222)
T ss_pred             CCCCCCCceEEEEEeceeEEEEEEEecCCHHHHHHHHHHHhchHheEEEecC
Confidence            764 679999999999999999999999999999999999999999999998

One of these proteins, PTX1 Q96RQ1 from SWISSPROT, is a homeodomain-containing transcription factor involved in regulating all pituitary hormone genes []. This protein is down regulated in prostate carcinoma []. The other protein, ERGIC-32 Q969X5 from SWISSPROT, is involved in protein transport from the ER to the Golgi [].

>PF13850 ERGIC_N: Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)

Probab=99.44  E-value=1e-13  Score=108.24  Aligned_cols=44  Identities=48%  Similarity=0.881  Sum_probs=42.0

Q ss_pred             CeecCCCCCeeeEEEEEEeCccCCCeeeeeeEecCCCeeeeccC
Q 022650            1 MSVDLKRGETLPIHINMTFPALPCDVLSVDAIDMSGKHEVDLDT   44 (294)
Q Consensus         1 l~VD~~~~~~l~In~DItfp~~PC~~l~lDv~D~~G~~~~~~~~   44 (294)
                      |.||.+++++|+||||||||+|||++|++|++|++|++++|++|
T Consensus        53 ~~VD~~~~~~l~in~ditf~~~pC~~l~vDv~D~~G~~~~dv~h   96 (96)
T PF13850_consen   53 LVVDTSRDEKLQINFDITFPHMPCDFLSVDVQDASGDHQLDVTH   96 (96)
T ss_pred             EEEcCCCCceEEEEEEEEECCCccCeeeeEeEccCCCeeccccC
Confidence            57999999999999999999999999999999999999999875

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00