Citrus Sinensis ID: 022680

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290---
Protein Sequence
MSQSSQHVFTNSPPSCSSRFTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYTPFKFIPNSKFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISEVLWSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVLLAMQEQQQKQLELILAIGKTGKLFENRQEPSQEQDKLKTSDFIDGAKQMETQETEAFGSSRGNKNDRA
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHcccccccHHHHHHHHHHcccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccEEEEcccccccccHccHHHHHHHHcccccccccccccccEEEEEEccccccccccccccccEEEEEEEccccccccEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHcccccccccccccccccccccccEcccccccccc
Coil and Loop (DISEMBL)
msqssqhvftnsppscssrftFYHSATNliknpnnlalpppitsrhllihishndytpfkfipnskfyhslkpnncsntsvvttqtndnfnldsLLSISEVLWSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVLLAMQEQQQKQLELILAIGKTgklfenrqepsqeqdklktsdfidgaKQMETQEteafgssrgnkndra
Flexible Loop (DISEMBL)
msqssqhvftnsppscsSRFTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYTPFKFIPNSKFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISEVLWSRVLACGVVSLVCGVWigaiirrrqwrrvcgekaraegresvnlvgriEKLEEDMKSSATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVLLAMQEQQQKQLELILAIGKTGKLfenrqepsqeqdklktsdFIDGAKQMEtqeteafgssrgnkndra
Low Complexity Region (SEG)
MSQSSQHVFTNSPPSCSSRFTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYTPFKFIPNSKFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISEVLWSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVllamqeqqqkqlelilaiGKTGKLFENRQEPSQEQDKLKTSDFIDGAKQMETQETEAFGSSRGNKNDRA
Disordered region (IsUnstruct)
******************RFTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYTPFKFIPNSKFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISEVLWSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARA*****VNLVGRIE*********ATILRVLSRQLEKLGVRFRVTRKALKDPITQ******************GDVLEKELGEIQKVLLAMQEQQQKQLELILAIGKTGK**********************************************
Disordered Region (DISOPRED)
******H**TNSPPSCSSRFTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYTPFKFIPNSKFYHSLK****************NFNLDSLLSISEVLWSRVLACGVVSLVCGVWIGAIIRRR**********************RIEKLEEDMKS*ATILRVLSRQLEKLGVRFRVTRKALKD*****************ALAM****************L**QEQQQKQLELILAIGKT************************************************
Disordered Region (DISEMBL)
**************SCSSRFTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYTPFKFIPNSKFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISEVLWSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVLLAMQEQQQKQLELILAIGKTGKLFE************KTSDFIDGAKQMETQ****************
Disordered Region (DISPRO)
*****QHVFTNSPPSCSSRFTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYTPFKFIPNSKFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISEVLWSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEK*******SVNLVGRIEKLEEDMKSSATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVLLAMQEQQQKQLELILAIGKTGKLFE*******************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSQSSQHVFTNSPPSCSSRFTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYTPFKFIPNSKFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISEVLWSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRxxxxxxxxxxxxxxxxxxxxxLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVxxxxxxxxxxxxxxxxxxxxxQLELILAIGKTGKLFENRQEPSQEQDKLKTSDFIDGAKQMETQETEAFGSSRGNKNDRA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	293
224083616	307	predicted protein [Populus trichocarpa]	0.924	0.882	0.482	7e-58
356512685	293	PREDICTED: uncharacterized protein LOC10	0.529	0.529	0.707	3e-53
359496689	193	PREDICTED: uncharacterized protein LOC10	0.651	0.989	0.626	3e-53
356525459	287	PREDICTED: uncharacterized protein LOC10	0.573	0.585	0.660	1e-52
449451421	323	PREDICTED: uncharacterized protein LOC10	0.825	0.749	0.478	3e-52
449520022	246	PREDICTED: uncharacterized LOC101207421,	0.552	0.658	0.664	2e-50
18424929	300	uncharacterized protein [Arabidopsis tha	0.805	0.786	0.455	5e-49
224093738	267	predicted protein [Populus trichocarpa]	0.699	0.767	0.5	3e-45
297797551	299	hypothetical protein ARALYDRAFT_496756 [	0.805	0.789	0.444	3e-45
296085648	139	unnamed protein product [Vitis vinifera]	0.474	1.0	0.664	5e-43

>gi|224083616|ref|XP_002307074.1| predicted protein [Populus trichocarpa] gi|222856523|gb|EEE94070.1| predicted protein [Populus trichocarpa]

 Score =  229 bits (585), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 152/315 (48%), Positives = 199/315 (63%), Gaps = 44/315 (13%)

Query: 6   QHVFTNSPPSCSSRFTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYTPFKFIPNS 65
            H+FTNSPP  +  F+    +   +             SRH+   +  +++      P +
Sbjct: 8   HHLFTNSPPRITLLFSSSSLSLRNLS-----------LSRHVTTSLHSSNFHFKPQTPRN 56

Query: 66  KFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISEVL-----------------WSRVLA 108
            F  +LK      T  + TQ ++ FNLD  LSI+E+L                 +S+  A
Sbjct: 57  SFSFTLKAYQSDPT--IRTQVSNQFNLDQFLSIAELLCIISSSIITISYALNCTFSKTGA 114

Query: 109 CGVVSLVCG-VW----------IGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEED 157
            GV+    G  W          IGA IRRRQW R+C E  R EG  S+NLVGRIEKLE+D
Sbjct: 115 LGVIGSNTGFAWGMVVMVSGVVIGAWIRRRQWWRICRETGR-EG--SLNLVGRIEKLEQD 171

Query: 158 MKSSATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKE 217
           M+SSATI+RVLSRQLEKLG+RFRVTRKALK+PI + AALAQKNSEATRALA+Q ++LEKE
Sbjct: 172 MRSSATIIRVLSRQLEKLGIRFRVTRKALKEPIVETAALAQKNSEATRALALQENILEKE 231

Query: 218 LGEIQKVLLAMQEQQQKQLELILAIGKTGKLFENRQEPSQEQDKLKTSDFIDGAKQMETQ 277
           LGE QK+LLAMQEQQQKQLELILAIGK+GK ++NR+E  +EQ+ +KTSD  +G  Q+E+ 
Sbjct: 232 LGETQKILLAMQEQQQKQLELILAIGKSGKSWDNRRERVEEQELIKTSDLTEGVNQLESH 291

Query: 278 ETEAFGSSRGNKNDR 292
           E +   +S+ + N+R
Sbjct: 292 EAQPSVTSKRSNNNR 306

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356512685|ref|XP_003525047.1| PREDICTED: uncharacterized protein LOC100790782 [Glycine max]

 Score =  214 bits (546), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 111/157 (70%), Positives = 129/157 (82%), Gaps = 2/157 (1%)

Query: 110 GVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSATILRVLS 169
           G   LV GV +GA IRRRQWRR C E  +  G   VNL+ RIEKLEEDM+SSAT++RVLS
Sbjct: 126 GGALLVVGVLVGAWIRRRQWRRACVETGK--GGLEVNLLERIEKLEEDMRSSATVVRVLS 183

Query: 170 RQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVLLAMQ 229
           RQLEKLGVRFRVTRKALKDPI + AALAQKNSEA RALA+Q D+LEKELGEIQ+VLLAMQ
Sbjct: 184 RQLEKLGVRFRVTRKALKDPIAETAALAQKNSEAARALAVQSDILEKELGEIQQVLLAMQ 243

Query: 230 EQQQKQLELILAIGKTGKLFENRQEPSQEQDKLKTSD 266
           EQQ+KQL+LILAIGK  KL+E++ E S+  D L+ S+
Sbjct: 244 EQQRKQLDLILAIGKASKLWESKHETSERHDTLEMSN 280

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496689|ref|XP_002269557.2| PREDICTED: uncharacterized protein LOC100244969 [Vitis vinifera]

 Score =  214 bits (545), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 121/193 (62%), Positives = 151/193 (78%), Gaps = 2/193 (1%)

Query: 101 VLWSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKS 160
           VL +R+L    V+LV GV +G+ IRRRQW R+  + A+  G ESVNLV R+EK+EED++S
Sbjct: 3   VLGNRILLWQAVALVGGVVVGSWIRRRQWWRIFNDTAKP-GIESVNLVERMEKMEEDIRS 61

Query: 161 SATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGE 220
            AT++RV+SRQLEKLG+RFRVTRKALK PI + A LAQKNSEATRALA+Q D+LEKELGE
Sbjct: 62  MATLIRVMSRQLEKLGIRFRVTRKALKQPIAETAVLAQKNSEATRALAIQEDILEKELGE 121

Query: 221 IQKVLLAMQEQQQKQLELILAIGKTGKLFENRQEPSQEQDKLKTSDFIDGAKQMETQETE 280
           IQKVLLAMQEQQQKQL+LILAIGK GKL+ENR+  S+EQD ++  D  +   QM+  +  
Sbjct: 122 IQKVLLAMQEQQQKQLDLILAIGKAGKLWENRRGQSEEQDAIEACDSAE-VGQMKAHQIP 180

Query: 281 AFGSSRGNKNDRA 293
           A    +G+ NDRA
Sbjct: 181 AAARQKGSNNDRA 193

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525459|ref|XP_003531342.1| PREDICTED: uncharacterized protein LOC100809936 [Glycine max]

 Score =  212 bits (540), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 113/171 (66%), Positives = 135/171 (78%), Gaps = 3/171 (1%)

Query: 104 SRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSAT 163
           +R    G   LV GV +GA IRRRQWRRV  E  +  G   VNL+ RIEKLEED++SSAT
Sbjct: 114 ARAAPFGGALLVVGVLVGAWIRRRQWRRVSVEAGK--GGLEVNLLERIEKLEEDLRSSAT 171

Query: 164 ILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQK 223
           ++RVLSRQLEKLGVRFRVTRK LKDPI + AALAQKNSEA RALA+Q D+LEKELGEIQ+
Sbjct: 172 VVRVLSRQLEKLGVRFRVTRKGLKDPIAETAALAQKNSEAARALAVQSDILEKELGEIQQ 231

Query: 224 VLLAMQEQQQKQLELILAIGKTGKLFENRQEPSQEQDKLKTSDFI-DGAKQ 273
           VLLAMQEQQ+KQL+LILA+GK  KL+E++QE ++  D L+ S+   DG KQ
Sbjct: 232 VLLAMQEQQRKQLDLILAVGKASKLWESKQETNERHDTLELSNSAEDGVKQ 282

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451421|ref|XP_004143460.1| PREDICTED: uncharacterized protein LOC101207421 [Cucumis sativus]

 Score =  211 bits (537), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/280 (47%), Positives = 168/280 (60%), Gaps = 38/280 (13%)

Query: 23  YHSATNLIKNPNNLALPPPITSRHLLIHISHNDY---TPFKFIPNSKFYHSLKPN-NCSN 78
           +  +T L +NP  ++LP P +     +H    DY   +PF F   S   H   P  + S 
Sbjct: 38  FCFSTFLSRNPC-VSLPFPPSRFPNTLHFQILDYKFRSPFNF--GSINAHHFCPRVSTSG 94

Query: 79  TSVVTTQTNDNFNLDSLLSISE-----------------------------VLWSRVLAC 109
                     +F++DSLLS +E                             V    VL  
Sbjct: 95  GVGRRPGGVADFDIDSLLSATEFFCLVASLIGSVGFALNCAKTRSKSLFLAVFGDGVLVG 154

Query: 110 GVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSATILRVLS 169
            ++ LV GV IGA IRRRQW RV  E A+  G   VNL+ +  KLEED++SSAT++RVLS
Sbjct: 155 TILFLVAGVAIGAWIRRRQWNRVFRETAK--GVLEVNLMEKTNKLEEDLRSSATLIRVLS 212

Query: 170 RQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVLLAMQ 229
           RQLEKLG+RFRVTRKALK P+ + AALAQK SEATRALA++GD+LEKEL EIQKVLLAMQ
Sbjct: 213 RQLEKLGIRFRVTRKALKKPVEETAALAQKTSEATRALAVRGDILEKELAEIQKVLLAMQ 272

Query: 230 EQQQKQLELILAIGKTGKLFENRQEPSQEQDKLKTSDFID 269
           EQQQKQL+LILAIG +GK++E+RQE S  Q  +   D ID
Sbjct: 273 EQQQKQLDLILAIGNSGKMWESRQEHSGGQSHVGRHDLID 312

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449520022|ref|XP_004167033.1| PREDICTED: uncharacterized LOC101207421, partial [Cucumis sativus]

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/164 (66%), Positives = 130/164 (79%), Gaps = 2/164 (1%)

Query: 106 VLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSATIL 165
           VL   ++ LV GV IGA IRRRQW RV  E A+  G   VNL+ +  KLEED++SSAT++
Sbjct: 74  VLVGTILFLVAGVAIGAWIRRRQWNRVFRETAK--GVLEVNLMEKTNKLEEDLRSSATLI 131

Query: 166 RVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVL 225
           RVLSRQLEKLG+RFRVTRKALK P+ + AALAQK SEATRALA++GD+LEKEL EIQKVL
Sbjct: 132 RVLSRQLEKLGIRFRVTRKALKKPVEETAALAQKTSEATRALAVRGDILEKELAEIQKVL 191

Query: 226 LAMQEQQQKQLELILAIGKTGKLFENRQEPSQEQDKLKTSDFID 269
           LAMQEQQQKQL+LILAIG +GK++E+RQE S  Q  +   D ID
Sbjct: 192 LAMQEQQQKQLDLILAIGNSGKMWESRQEHSGGQSHVGRHDLID 235

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18424929|ref|NP_569009.1| uncharacterized protein [Arabidopsis thaliana] gi|10178187|dbj|BAB11661.1| unnamed protein product [Arabidopsis thaliana] gi|15028313|gb|AAK76633.1| unknown protein [Arabidopsis thaliana] gi|19310695|gb|AAL85078.1| unknown protein [Arabidopsis thaliana] gi|332010646|gb|AED98029.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  200 bits (509), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 122/268 (45%), Positives = 163/268 (60%), Gaps = 32/268 (11%)

Query: 8   VFTNSPPSCSSR---FTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYTPFKFIPN 64
           +F+ S P   SR     F  SA    +  ++++ P PI  RH+ I    N      +  +
Sbjct: 11  LFSGSTPVRISRRSNLCFAVSAARASRR-DSISFPQPIFLRHV-ISTQSNFEIDRNYRAH 68

Query: 65  SKFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISEVL---------------------- 102
           +    S + ++ SN  ++   ++D F+L S +S +E L                      
Sbjct: 69  ASSIGSFEDSSSSN--LLEDASSDGFDLGSFVSFAEALCILSSAVISVVLAVNYVVVGEI 126

Query: 103 WSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSA 162
             +VL+ G V LV  V  G+ +RRRQW R+C     +EG    NL+ R+EKLE+D+KSS 
Sbjct: 127 GKKVLSLGFVGLVGSVATGSWLRRRQWMRICKGARESEG---TNLIRRLEKLEKDLKSST 183

Query: 163 TILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQ 222
           +I+RVLSR LEKLG+RFRVTRKALK+PI++ AALAQKNSEATR L  Q ++LEKELGEIQ
Sbjct: 184 SIVRVLSRHLEKLGIRFRVTRKALKEPISETAALAQKNSEATRVLVAQQEILEKELGEIQ 243

Query: 223 KVLLAMQEQQQKQLELILAIGKTGKLFE 250
           KVLLAMQEQQ+KQLELIL I K+ KLFE
Sbjct: 244 KVLLAMQEQQRKQLELILTIAKSSKLFE 271

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224093738|ref|XP_002309969.1| predicted protein [Populus trichocarpa] gi|222852872|gb|EEE90419.1| predicted protein [Populus trichocarpa]

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/256 (50%), Positives = 152/256 (59%), Gaps = 51/256 (19%)

Query: 8   VFTNSPPSCSSRFTFYHSATNLIKNPNNLALPPPITSRHLLIHI-SHNDYTPFKF---IP 63
           +F NSP     R T   ++T+L  +  NL L     SRH+   + SHN    F F    P
Sbjct: 14  LFNNSP----HRITLLFTSTSL--SLRNLTL-----SRHVNTSLHSHN----FHFKPQTP 58

Query: 64  NSKFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISE-------------------VLWS 104
            S F  +LK      T  + TQ +  FNLD  LS++E                   VL S
Sbjct: 59  KSSFNLTLKAYQSDPT--IPTQDSKQFNLDHFLSVAELLCIFSSSIITISYALNYTVLNS 116

Query: 105 RVLACGVVSLVCG-VW----------IGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEK 153
           +    GV+    G  W          IGA IRRR W RV  E  R   RES+NLVGRIEK
Sbjct: 117 KRGVLGVIGSNTGFAWGMVVMVSGVVIGAWIRRRMWWRVSRETGREGSRESLNLVGRIEK 176

Query: 154 LEEDMKSSATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDV 213
           LEED++SSATI+RVLSRQLEKLG+RFRVTRKALK+PI + AALAQKNS+ATRALA+Q D+
Sbjct: 177 LEEDLRSSATIIRVLSRQLEKLGIRFRVTRKALKEPIAETAALAQKNSDATRALAVQEDI 236

Query: 214 LEKELGEIQKVLLAMQ 229
           LEKELGEIQKVLLAMQ
Sbjct: 237 LEKELGEIQKVLLAMQ 252

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297797551|ref|XP_002866660.1| hypothetical protein ARALYDRAFT_496756 [Arabidopsis lyrata subsp. lyrata] gi|297312495|gb|EFH42919.1| hypothetical protein ARALYDRAFT_496756 [Arabidopsis lyrata subsp. lyrata]

 Score =  188 bits (477), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/268 (44%), Positives = 161/268 (60%), Gaps = 32/268 (11%)

Query: 1   MSQSSQH-VFTNSPPSCSSR--FTFYHSATNLIKNPNNLALPPPITSRHLLIHISHNDYT 57
           +S  SQ+ +F+ S P   SR    F  SA    +  ++++ P PI  RH+ I    N   
Sbjct: 3   LSLPSQYALFSGSTPVRISRSNLCFAVSAARTSRR-DSISFPQPILLRHV-ISTRSNFEI 60

Query: 58  PFKFIPNSKFYHSLKPNNCSNTSVVTTQTNDNFNLDSLLSISEVL--------------- 102
              +  ++    S + ++ SN   +    +D F+L S +S +E L               
Sbjct: 61  DRDYRAHASSIGSYEDSSSSNE--LEDANSDGFDLGSFVSFAEALCILSSAVISVVLAVN 118

Query: 103 -------WSRVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLE 155
                    +VL+ G V LV  V  G+ +RRRQW R+C     +EG    NL+ R+EKLE
Sbjct: 119 YVVVGEIGKKVLSLGFVGLVGSVATGSWLRRRQWMRICKGARESEG---TNLIRRLEKLE 175

Query: 156 EDMKSSATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLE 215
           +D+KSS +I+RVLSR LEKLG+RFRVTRKALK+PI++ AALAQKNSEATR LA Q ++LE
Sbjct: 176 KDLKSSTSIVRVLSRHLEKLGIRFRVTRKALKEPISETAALAQKNSEATRVLAAQQEILE 235

Query: 216 KELGEIQKVLLAMQEQQQKQLELILAIG 243
           KELGEIQKVLLA+Q+QQ+KQLELIL I 
Sbjct: 236 KELGEIQKVLLALQDQQRKQLELILTIA 263

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085648|emb|CBI29447.3| unnamed protein product [Vitis vinifera]

 Score =  181 bits (458), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 93/140 (66%), Positives = 114/140 (81%), Gaps = 1/140 (0%)

Query: 154 LEEDMKSSATILRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDV 213
           +EED++S AT++RV+SRQLEKLG+RFRVTRKALK PI + A LAQKNSEATRALA+Q D+
Sbjct: 1   MEEDIRSMATLIRVMSRQLEKLGIRFRVTRKALKQPIAETAVLAQKNSEATRALAIQEDI 60

Query: 214 LEKELGEIQKVLLAMQEQQQKQLELILAIGKTGKLFENRQEPSQEQDKLKTSDFIDGAKQ 273
           LEKELGEIQKVLLAMQEQQQKQL+LILAIGK GKL+ENR+  S+EQD ++  D  +   Q
Sbjct: 61  LEKELGEIQKVLLAMQEQQQKQLDLILAIGKAGKLWENRRGQSEEQDAIEACDSAE-VGQ 119

Query: 274 METQETEAFGSSRGNKNDRA 293
           M+  +  A    +G+ NDRA
Sbjct: 120 MKAHQIPAAARQKGSNNDRA 139

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	293
TAIR|locus:2171865	300	AT5G65250 "AT5G65250" [Arabido	0.539	0.526	0.530	2.2e-42

TAIR|locus:2171865 AT5G65250 "AT5G65250" [Arabidopsis thaliana (taxid:3702)]

 Score = 388 (141.6 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
 Identities = 88/166 (53%), Positives = 110/166 (66%)

Query:   105 RVLACGVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSATI 164
             +VL+ G V LV  V  G+ +RRRQW R+C     +EG    NL+ R+EKLE+D+KSS +I
Sbjct:   129 KVLSLGFVGLVGSVATGSWLRRRQWMRICKGARESEG---TNLIRRLEKLEKDLKSSTSI 185

Query:   165 LRVLSRQLEKLGVRFRVTRKALKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKV 224
             +RVLSR LEKLG+RFRVTRKALK+PI++ AALAQKNSEATR L  Q ++LEKELGEIQKV
Sbjct:   186 VRVLSRHLEKLGIRFRVTRKALKEPISETAALAQKNSEATRVLVAQQEILEKELGEIQKV 245

Query:   225 XXXXXXXXXXXXXXXXXXGKTGKLFEN----RQEPSQEQDKLKTSD 266
                                K+ KLFE+    +Q PS EQ K K  +
Sbjct:   246 LLAMQEQQRKQLELILTIAKSSKLFESSTSSKQSPS-EQRKNKAEE 290

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009941 "chloroplast envelope" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	293
PRK06975	656	bifunctional uroporphyrinogen-III synthetase/uropo	88.95
PF10805	106	DUF2730: Protein of unknown function (DUF2730); In	85.8
cd07628	185	BAR_Atg24p The Bin/Amphiphysin/Rvs (BAR) domain of	85.11
TIGR03495	135	phage_LysB phage lysis regulatory protein, LysB fa	83.32
PF06295	128	DUF1043: Protein of unknown function (DUF1043); In	82.43

>PRK06975 bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed

Probab=88.95  E-value=3.3  Score=42.39  Aligned_cols=48  Identities=17%  Similarity=0.164  Sum_probs=37.3

Q ss_pred             ccchHHHHHHHHhhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 022680          186 LKDPITQAAALAQKNSEATRALAMQGDVLEKELGEIQKVLLAMQEQQQ  233 (293)
Q Consensus       186 LrdPI~etaAlAqknSeatraLA~redlLEkEL~eiQ~vl~AMQeqq~  233 (293)
                      +..+..|...++++..+..+.+..|.+.||.++.+.++-..++|++-+
T Consensus       362 ~~~~~~e~~~~~~~~~~~~~~~~~~l~~le~~l~~~~~~~~~L~~~~~  409 (656)
T PRK06975        362 NDAQTAELRVKTEQAQASVHQLDSQFAQLDGKLADAQSAQQALEQQYQ  409 (656)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344555666667777778888999999999999999988888877654

>PF10805 DUF2730: Protein of unknown function (DUF2730); InterPro: IPR020269 This entry represents a family of various hypothetical proteins

Probab=85.80  E-value=10  Score=30.64  Aligned_cols=12  Identities=25%  Similarity=0.470  Sum_probs=5.0

Q ss_pred             HHHHHHHHHHhH
Q 022680          148 VGRIEKLEEDMK  159 (293)
Q Consensus       148 ~~RiekLEe~vr  159 (293)
                      ..|+..||..++
T Consensus        48 ~~Rl~~lE~~l~   59 (106)
T PF10805_consen   48 DRRLQALETKLE   59 (106)
T ss_pred             HHHHHHHHHHHH
Confidence            344444444433

The proteins, which include HI1498 and Gp25, from phage Mu, are currently uncharacterised.

>cd07628 BAR_Atg24p The Bin/Amphiphysin/Rvs (BAR) domain of yeast Sorting Nexin Atg24p

Probab=85.11  E-value=12  Score=32.48  Aligned_cols=94  Identities=16%  Similarity=0.237  Sum_probs=60.1

Q ss_pred             hhHHHHHHHHHHhHhHHHHHHHHH-------HHHHhhcceeeeeh---h-hccchHHHHHHHHhhhhHHHHHHHhh-hhh
Q 022680          146 NLVGRIEKLEEDMKSSATILRVLS-------RQLEKLGVRFRVTR---K-ALKDPITQAAALAQKNSEATRALAMQ-GDV  213 (293)
Q Consensus       146 ~l~~RiekLEe~vrs~~t~irvLS-------RqlEKLGvRfRvtr---R-tLrdPI~etaAlAqknSeatraLA~r-edl  213 (293)
                      .+.+.+.+||+.+...-.+...+.       -.+..+|..|...-   . +|-+|+...+....+.|..+..|+.. .+-
T Consensus         8 ei~e~~~~L~~~L~~l~ki~~Rl~kr~~~l~~d~~efg~~~~~L~~~E~~~L~~~l~~~~~~~~~~s~~~~~l~~~~~~~   87 (185)
T cd07628           8 EIREKSDKLDENLTKIDKIFAKVVKRQSDLSVDYADLATQFQKLGSLESGEITEPFKIFSESLSQFSTSLRVLNKYTDEN   87 (185)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            455666666666655444443332       23334444443221   2 39999999999999999999999987 444


Q ss_pred             HHHHHHHH----HHHHHHHHHHHHHHHHHH
Q 022680          214 LEKELGEI----QKVLLAMQEQQQKQLELI  239 (293)
Q Consensus       214 LEkEL~ei----Q~vl~AMQeqq~KQleLI  239 (293)
                      +..=|++.    +++-.+|....+||++.=
T Consensus        88 f~~~Lkd~~~y~~s~k~~lk~R~~kq~d~e  117 (185)
T cd07628          88 YLTSLKDLLHYILSLKNLIKLRDQKQLDYE  117 (185)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence            77677765    445556667777777653

BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. Atg24p is involved in membrane fusion events at the vacuolar surface during pexophagy. BAR domains form dimers that bind to membranes, induce membrane bending and curvature, and may also be involved in protein-protein interactions.

>TIGR03495 phage_LysB phage lysis regulatory protein, LysB family

Probab=83.32  E-value=28  Score=30.06  Aligned_cols=50  Identities=22%  Similarity=0.030  Sum_probs=32.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccccccCCccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhc
Q 022680          111 VVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSATILRVLSRQLEKLG  176 (293)
Q Consensus       111 ~V~LV~AV~iGaiIRRRQW~Ri~~~~gr~~g~~~~~l~~RiekLEe~vrs~~t~irvLSRqlEKLG  176 (293)
                      ++.++.+|+++.|.+   |+ .            .++-+.++.-...++..-+.+..++.|++-|.
T Consensus         4 i~l~~~a~~~~~~~~---~~-~------------~~l~~~~~~a~~~~~~~~~~l~~~~~qL~~l~   53 (135)
T TIGR03495         4 IVLLGLLVAGLGWQS---QR-L------------RNARADLERANRVLKAQQAELASKANQLIVLL   53 (135)
T ss_pred             HHHHHHHHHHHHHHH---HH-H------------HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            445666666665653   31 1            25677778777777777777777777776554

Members of this protein family are phage lysis regulatory protein, including the well-studied protein LysB (lysis protein B) of Enterobacteria phage P2. For members of this family, genes are found in phage or in prophage regions of bacterial genomes, typically near a phage lysozyme or phage holin.

>PF06295 DUF1043: Protein of unknown function (DUF1043); InterPro: IPR009386 This entry consists of several hypothetical bacterial proteins of unknown function

Probab=82.43  E-value=7.7  Score=32.16  Aligned_cols=71  Identities=21%  Similarity=0.349  Sum_probs=42.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhccccccCCccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhcceeeeehhhccch
Q 022680          110 GVVSLVCGVWIGAIIRRRQWRRVCGEKARAEGRESVNLVGRIEKLEEDMKSSATILRVLSRQLEKLGVRFRVTRKALKDP  189 (293)
Q Consensus       110 g~V~LV~AV~iGaiIRRRQW~Ri~~~~gr~~g~~~~~l~~RiekLEe~vrs~~t~irvLSRqlEKLGvRfRvtrRtLrdP  189 (293)
                      .++.||+|++||+++-|.-....                ....+||+.+...-              -.+---|..+.+.
T Consensus         2 ~~i~lvvG~iiG~~~~r~~~~~~----------------~~q~~l~~eL~~~k--------------~el~~yk~~V~~H   51 (128)
T PF06295_consen    2 AIIGLVVGLIIGFLIGRLTSSNQ----------------QKQAKLEQELEQAK--------------QELEQYKQEVNDH   51 (128)
T ss_pred             hHHHHHHHHHHHHHHHHHhccch----------------hhHHHHHHHHHHHH--------------HHHHHHHHHHHHH
Confidence            35778999999988866543111                12344554444221              1112246778888


Q ss_pred             HHHHHHHHhhhhHHHHHHHhh
Q 022680          190 ITQAAALAQKNSEATRALAMQ  210 (293)
Q Consensus       190 I~etaAlAqknSeatraLA~r  210 (293)
                      ..+||.+..++.+--+-|-+.
T Consensus        52 F~~ta~Ll~~l~~~Y~~l~~H   72 (128)
T PF06295_consen   52 FAQTAELLDNLTQDYQKLYQH   72 (128)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            888988888777766655443

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00