Citrus Sinensis ID: 022685

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290---
MQGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK
cccccccccccccccEEEEcccccccccccccccccHHHHHHHHHcccccccccccccccccccccEEccccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHHccccEEEEEEcccccccccccccccccHHHHHHHHHccccccEEEEEEccccHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHcccccEEEEEEcccccccccccccccccccccHHHHHHHHHHcccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHccc
cccccccccccccccEEEEEEcccccccccccccccHHHHHHHHHHHcccccccccccccHccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHccccEEEEEEEccccccHHHccccccccHHHHHHHHccccccEEEEEEEcccHHHHHHHHHcccEEEEHHHcccHHHHHHHHHHHccccEEEEEEEHHHEcccccccccccccccEcHHHHHHHHHHHcccEEEcEEEEEcccccccccHHHHHHHHHHHHHHHHccc
MQGELVRALGgavastsllgvplghnssflqgpafapprireaiwcgstnstteegkelndprvltdvgdvpvqeirdcgvdddrlMNVITESVKLvmeedplhplvlggdhsisfPVIRAVSeklggpvdvlhldahpdiydafegnkyshasSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRDRQFLEnlklgegvkGVYISVdvdcldpafapgvshiepgglsFRDVLNILHNLQADVVAADvvefnpqrdtvDGMTAMVAAKLVRELTAKISK
MQGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGStnstteegkelndprvltdvgdvpvqeirdcgvdddrlMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSitkegreqgkrfgveqyemrtfsRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK
MQGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK
*******ALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGS**************RVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKE*****KRFGVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVR********
MQGEL*RALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK
**********GAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNS********NDPRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK
*****VR*LGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK
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MQGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query293 2.2.26 [Sep-21-2011]
P46637342 Arginase OS=Arabidopsis t yes no 1.0 0.856 0.928 1e-160
Q9ZPF5344 Probable arginase OS=Arab no no 1.0 0.851 0.853 1e-149
O49046350 Arginase OS=Glycine max G no no 1.0 0.837 0.757 1e-134
Q9BSE5352 Agmatinase, mitochondrial yes no 0.894 0.744 0.331 5e-29
Q814Q2290 Agmatinase OS=Bacillus ce yes no 0.873 0.882 0.311 8e-29
Q81JT1290 Agmatinase OS=Bacillus an yes no 0.873 0.882 0.315 3e-28
Q90XD2340 Agmatinase, mitochondrial yes no 0.860 0.741 0.340 2e-26
Q57757284 Uncharacterized protein M yes no 0.877 0.904 0.292 4e-26
Q9KBE3319 Formimidoylglutamase OS=B yes no 0.877 0.805 0.345 6e-26
P70999290 Agmatinase OS=Bacillus su yes no 0.887 0.896 0.303 1e-25
>sp|P46637|ARGI1_ARATH Arginase OS=Arabidopsis thaliana GN=At4g08900 PE=2 SV=1 Back     alignment and function desciption
 Score =  565 bits (1456), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 272/293 (92%), Positives = 282/293 (96%)

Query: 1   MQGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELN 60
           ++GELVR LGGA ASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNS TEEGKEL 
Sbjct: 50  LKGELVRLLGGAKASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSATEEGKELK 109

Query: 61  DPRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIR 120
           DPRVLTDVGDVPVQEIRDCGVDDDRLMNVI+ESVKLVMEE+PL PLVLGGDHSIS+PV+R
Sbjct: 110 DPRVLTDVGDVPVQEIRDCGVDDDRLMNVISESVKLVMEEEPLRPLVLGGDHSISYPVVR 169

Query: 121 AVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEG 180
           AVSEKLGGPVD+LHLDAHPDIYD FEGNKYSHASSFARIMEGGYARRLLQVGIRSI +EG
Sbjct: 170 AVSEKLGGPVDILHLDAHPDIYDCFEGNKYSHASSFARIMEGGYARRLLQVGIRSINQEG 229

Query: 181 REQGKRFGVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGG 240
           REQGKRFGVEQYEMRTFS+DR  LENLKLGEGVKGVYIS+DVDCLDPAFAPGVSHIEPGG
Sbjct: 230 REQGKRFGVEQYEMRTFSKDRPMLENLKLGEGVKGVYISIDVDCLDPAFAPGVSHIEPGG 289

Query: 241 LSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 293
           LSFRDVLNILHNLQADVV ADVVEFNPQRDTVDGMTAMVAAKLVREL AKISK
Sbjct: 290 LSFRDVLNILHNLQADVVGADVVEFNPQRDTVDGMTAMVAAKLVRELAAKISK 342

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 3EC: .EC: 1
>sp|Q9ZPF5|ARGI2_ARATH Probable arginase OS=Arabidopsis thaliana GN=At4g08870 PE=1 SV=1 Back     alignment and function description
>sp|O49046|ARGI_SOYBN Arginase OS=Glycine max GN=AG1 PE=2 SV=1 Back     alignment and function description
>sp|Q9BSE5|SPEB_HUMAN Agmatinase, mitochondrial OS=Homo sapiens GN=AGMAT PE=1 SV=2 Back     alignment and function description
>sp|Q814Q2|SPEB_BACCR Agmatinase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=speB PE=3 SV=1 Back     alignment and function description
>sp|Q81JT1|SPEB_BACAN Agmatinase OS=Bacillus anthracis GN=speB PE=3 SV=1 Back     alignment and function description
>sp|Q90XD2|SPEB_CHICK Agmatinase, mitochondrial OS=Gallus gallus GN=AGMAT PE=2 SV=1 Back     alignment and function description
>sp|Q57757|Y309_METJA Uncharacterized protein MJ0309 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0309 PE=3 SV=1 Back     alignment and function description
>sp|Q9KBE3|HUTG_BACHD Formimidoylglutamase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=hutG PE=3 SV=1 Back     alignment and function description
>sp|P70999|SPEB_BACSU Agmatinase OS=Bacillus subtilis (strain 168) GN=speB PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query293
255541244338 arginase, putative [Ricinus communis] gi 1.0 0.866 0.952 1e-163
224127346333 predicted protein [Populus trichocarpa] 1.0 0.879 0.938 1e-161
224063758338 predicted protein [Populus trichocarpa] 1.0 0.866 0.941 1e-161
118489295338 unknown [Populus trichocarpa x Populus d 1.0 0.866 0.941 1e-160
350538013338 arginase 1 [Solanum lycopersicum] gi|546 1.0 0.866 0.928 1e-160
148828535338 arginase [Malus hupehensis] 1.0 0.866 0.938 1e-160
296089193371 unnamed protein product [Vitis vinifera] 1.0 0.789 0.928 1e-160
15236640342 arginase [Arabidopsis thaliana] gi|11684 1.0 0.856 0.928 1e-159
297813247342 arginase [Arabidopsis lyrata subsp. lyra 1.0 0.856 0.924 1e-158
115456826340 Os04g0106300 [Oryza sativa Japonica Grou 1.0 0.861 0.914 1e-157
>gi|255541244|ref|XP_002511686.1| arginase, putative [Ricinus communis] gi|223548866|gb|EEF50355.1| arginase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  579 bits (1492), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 279/293 (95%), Positives = 289/293 (98%)

Query: 1   MQGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELN 60
           ++GELVRALGGA AS+SLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELN
Sbjct: 46  LKGELVRALGGAKASSSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELN 105

Query: 61  DPRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIR 120
           DPRVLTDVGDVPVQEIRDC VDDDRLMNVI+ESVKLVMEEDPL PLVLGGDHSISFPV+R
Sbjct: 106 DPRVLTDVGDVPVQEIRDCSVDDDRLMNVISESVKLVMEEDPLRPLVLGGDHSISFPVVR 165

Query: 121 AVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEG 180
           AVSEKLGGPVD+LHLDAHPDIY AFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEG
Sbjct: 166 AVSEKLGGPVDILHLDAHPDIYHAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEG 225

Query: 181 REQGKRFGVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGG 240
           REQGK++GVEQ+EMRTFSRDRQFLENLKLGEGVKGVYIS+DVDCLDPAFAPGVSHIEPGG
Sbjct: 226 REQGKKYGVEQFEMRTFSRDRQFLENLKLGEGVKGVYISIDVDCLDPAFAPGVSHIEPGG 285

Query: 241 LSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 293
           LSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK
Sbjct: 286 LSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 338

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224127346|ref|XP_002320051.1| predicted protein [Populus trichocarpa] gi|222860824|gb|EEE98366.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224063758|ref|XP_002301277.1| predicted protein [Populus trichocarpa] gi|222843003|gb|EEE80550.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118489295|gb|ABK96452.1| unknown [Populus trichocarpa x Populus deltoides] Back     alignment and taxonomy information
>gi|350538013|ref|NP_001234578.1| arginase 1 [Solanum lycopersicum] gi|54648780|gb|AAV36808.1| arginase 1 [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|148828535|gb|ABR13881.1| arginase [Malus hupehensis] Back     alignment and taxonomy information
>gi|296089193|emb|CBI38896.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|15236640|ref|NP_192629.1| arginase [Arabidopsis thaliana] gi|1168493|sp|P46637.1|ARGI1_ARATH RecName: Full=Arginase gi|602422|gb|AAA85816.1| arginase [Arabidopsis thaliana] gi|4325373|gb|AAD17369.1| Arabidopsis thaliana arginase (SW:P46637) (Pfam: PF00491, Score=419.6, E=3.7e-142 N=1) [Arabidopsis thaliana] gi|7267532|emb|CAB78014.1| arginase [Arabidopsis thaliana] gi|15450351|gb|AAK96469.1| AT4g08900/T3H13_7 [Arabidopsis thaliana] gi|16974475|gb|AAL31241.1| AT4g08900/T3H13_7 [Arabidopsis thaliana] gi|332657294|gb|AEE82694.1| arginase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297813247|ref|XP_002874507.1| arginase [Arabidopsis lyrata subsp. lyrata] gi|297320344|gb|EFH50766.1| arginase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|115456826|ref|NP_001052013.1| Os04g0106300 [Oryza sativa Japonica Group] gi|32488415|emb|CAE02758.1| OSJNBb0085F13.5 [Oryza sativa Japonica Group] gi|38346876|emb|CAE04612.2| OSJNBb0004G23.10 [Oryza sativa Japonica Group] gi|113563584|dbj|BAF13927.1| Os04g0106300 [Oryza sativa Japonica Group] gi|125589093|gb|EAZ29443.1| hypothetical protein OsJ_13517 [Oryza sativa Japonica Group] gi|215765370|dbj|BAG87067.1| unnamed protein product [Oryza sativa Japonica Group] gi|301344557|gb|ADK74000.1| arginase [Oryza sativa Indica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query293
TAIR|locus:2138718342 ARGAH1 "arginine amidohydrolas 1.0 0.856 0.928 6.6e-145
TAIR|locus:2138743344 ARGAH2 "arginine amidohydrolas 1.0 0.851 0.853 1.8e-135
TIGR_CMR|SPO_2464315 SPO_2464 "agmatinase" [Ruegeri 0.918 0.853 0.311 6.9e-31
UNIPROTKB|Q9BSE5352 AGMAT "Agmatinase, mitochondri 0.901 0.75 0.340 1.1e-30
TIGR_CMR|BA_3709323 BA_3709 "formiminoglutamase" [ 0.901 0.817 0.340 1.1e-30
TIGR_CMR|BA_5617290 BA_5617 "agmatinase, putative" 0.873 0.882 0.315 1.8e-30
UNIPROTKB|F1SUU6361 AGMAT "Uncharacterized protein 0.901 0.731 0.343 3e-30
UNIPROTKB|E1BLC0361 AGMAT "Uncharacterized protein 0.901 0.731 0.350 2.7e-29
UNIPROTKB|E2QVZ9352 AGMAT "Uncharacterized protein 0.901 0.75 0.343 3.4e-29
TIGR_CMR|CHY_1620287 CHY_1620 "putative agmatinase" 0.877 0.895 0.329 9.1e-29
TAIR|locus:2138718 ARGAH1 "arginine amidohydrolase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1416 (503.5 bits), Expect = 6.6e-145, P = 6.6e-145
 Identities = 272/293 (92%), Positives = 282/293 (96%)

Query:     1 MQGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELN 60
             ++GELVR LGGA ASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNS TEEGKEL 
Sbjct:    50 LKGELVRLLGGAKASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSATEEGKELK 109

Query:    61 DPRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIR 120
             DPRVLTDVGDVPVQEIRDCGVDDDRLMNVI+ESVKLVMEE+PL PLVLGGDHSIS+PV+R
Sbjct:   110 DPRVLTDVGDVPVQEIRDCGVDDDRLMNVISESVKLVMEEEPLRPLVLGGDHSISYPVVR 169

Query:   121 AVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEG 180
             AVSEKLGGPVD+LHLDAHPDIYD FEGNKYSHASSFARIMEGGYARRLLQVGIRSI +EG
Sbjct:   170 AVSEKLGGPVDILHLDAHPDIYDCFEGNKYSHASSFARIMEGGYARRLLQVGIRSINQEG 229

Query:   181 REQGKRFGVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGG 240
             REQGKRFGVEQYEMRTFS+DR  LENLKLGEGVKGVYIS+DVDCLDPAFAPGVSHIEPGG
Sbjct:   230 REQGKRFGVEQYEMRTFSKDRPMLENLKLGEGVKGVYISIDVDCLDPAFAPGVSHIEPGG 289

Query:   241 LSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 293
             LSFRDVLNILHNLQADVV ADVVEFNPQRDTVDGMTAMVAAKLVREL AKISK
Sbjct:   290 LSFRDVLNILHNLQADVVGADVVEFNPQRDTVDGMTAMVAAKLVRELAAKISK 342
GO:0005739 "mitochondrion" evidence=ISM
GO:0006595 "polyamine metabolic process" evidence=ISS
GO:0008783 "agmatinase activity" evidence=ISS
GO:0016813 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines" evidence=IEA
GO:0046872 "metal ion binding" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
GO:0042742 "defense response to bacterium" evidence=IEP
GO:0004053 "arginase activity" evidence=IGI;IMP
GO:0050897 "cobalt ion binding" evidence=IDA
GO:0006527 "arginine catabolic process" evidence=IGI
TAIR|locus:2138743 ARGAH2 "arginine amidohydrolase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_2464 SPO_2464 "agmatinase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BSE5 AGMAT "Agmatinase, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
TIGR_CMR|BA_3709 BA_3709 "formiminoglutamase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|BA_5617 BA_5617 "agmatinase, putative" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|F1SUU6 AGMAT "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E1BLC0 AGMAT "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2QVZ9 AGMAT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1620 CHY_1620 "putative agmatinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9ZPF5ARGI2_ARATH3, ., 5, ., 3, ., 10.85321.00.8517nono
P70999SPEB_BACSU3, ., 5, ., 3, ., 1, 10.30320.88730.8965yesno
P19268YHMF_METFENo assigned EC number0.31890.87370.8982yesno
Q814Q2SPEB_BACCR3, ., 5, ., 3, ., 1, 10.31130.87370.8827yesno
Q2NRD3SPEB_SODGM3, ., 5, ., 3, ., 1, 10.30140.87370.8338yesno
Q7N122SPEB_PHOLL3, ., 5, ., 3, ., 1, 10.30850.87370.8338yesno
P46637ARGI1_ARATH3, ., 5, ., 3, ., 10.92831.00.8567yesno
Q81JT1SPEB_BACAN3, ., 5, ., 3, ., 1, 10.31500.87370.8827yesno
O49046ARGI_SOYBN3, ., 5, ., 3, ., 10.75761.00.8371nono
Q9KBE3HUTG_BACHD3, ., 5, ., 3, ., 80.34530.87710.8056yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.5.3.80.824
3rd Layer3.5.3.10.979
3rd Layer3.5.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query293
PLN02615338 PLN02615, PLN02615, arginase 0.0
cd11593263 cd11593, Agmatinase-like_2, Agmatinase and related 1e-102
pfam00491268 pfam00491, Arginase, Arginase family 3e-83
cd09990275 cd09990, Agmatinase-like, Agmatinase-like family 5e-82
COG0010305 COG0010, SpeB, Arginase/agmatinase/formimionogluta 2e-59
cd11589274 cd11589, Agmatinase_like_1, Agmatinase and related 7e-52
cd11592289 cd11592, Agmatinase_PAH, Agmatinase-like family in 2e-51
TIGR01230275 TIGR01230, agmatinase, agmatinase 6e-46
cd09015270 cd09015, Ureohydrolase, Ureohydrolase superfamily 1e-35
PRK01722320 PRK01722, PRK01722, formimidoylglutamase; Provisio 8e-34
cd09987217 cd09987, Arginase_HDAC, Arginase-like and histone- 4e-33
cd09989290 cd09989, Arginase, Arginase family 1e-30
PRK02190301 PRK02190, PRK02190, agmatinase; Provisional 7e-29
cd09999272 cd09999, Arginase-like_1, Arginase-like amidino hy 8e-26
TIGR01227307 TIGR01227, hutG, formimidoylglutamase 1e-24
cd09988262 cd09988, Formimidoylglutamase, Formimidoylglutamas 1e-21
TIGR01229300 TIGR01229, rocF_arginase, arginase 1e-19
cd11587294 cd11587, Arginase-like, Arginase types I and II an 1e-16
PRK13773324 PRK13773, PRK13773, formimidoylglutamase; Provisio 7e-14
PRK13776318 PRK13776, PRK13776, formimidoylglutamase; Provisio 5e-13
PRK13772314 PRK13772, PRK13772, formimidoylglutamase; Provisio 5e-11
PRK13775328 PRK13775, PRK13775, formimidoylglutamase; Provisio 6e-09
PRK13774311 PRK13774, PRK13774, formimidoylglutamase; Provisio 2e-04
>gnl|CDD|178224 PLN02615, PLN02615, arginase Back     alignment and domain information 
 Score =  619 bits (1597), Expect = 0.0
 Identities = 274/293 (93%), Positives = 286/293 (97%)

Query: 1   MQGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELN 60
           ++GELVRALGGA AS+ LLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELN
Sbjct: 46  LKGELVRALGGAKASSCLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELN 105

Query: 61  DPRVLTDVGDVPVQEIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIR 120
           DPRVLTDVGDVPVQEIRDCGVDDDRLMNVI+ESVKLVMEE+PL PLVLGGDHSIS+PV+R
Sbjct: 106 DPRVLTDVGDVPVQEIRDCGVDDDRLMNVISESVKLVMEEEPLRPLVLGGDHSISYPVVR 165

Query: 121 AVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEG 180
           AVSEKLGGPVD+LHLDAHPDIY AFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEG
Sbjct: 166 AVSEKLGGPVDILHLDAHPDIYHAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEG 225

Query: 181 REQGKRFGVEQYEMRTFSRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGG 240
           REQGKRFGVEQYEMRTFS+DR+ LENLKLGEGVKGVYIS+DVDCLDPAFAPGVSHIEPGG
Sbjct: 226 REQGKRFGVEQYEMRTFSKDREKLENLKLGEGVKGVYISIDVDCLDPAFAPGVSHIEPGG 285

Query: 241 LSFRDVLNILHNLQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 293
           LSFRDVLNILHNLQ DVV ADVVEFNPQRDTVDGMTAMVAAKLVRELTAK+SK
Sbjct: 286 LSFRDVLNILHNLQGDVVGADVVEFNPQRDTVDGMTAMVAAKLVRELTAKMSK 338

Length = 338
>gnl|CDD|212539 cd11593, Agmatinase-like_2, Agmatinase and related proteins Back     alignment and domain information
>gnl|CDD|215946 pfam00491, Arginase, Arginase family Back     alignment and domain information
>gnl|CDD|212516 cd09990, Agmatinase-like, Agmatinase-like family Back     alignment and domain information
>gnl|CDD|223089 COG0010, SpeB, Arginase/agmatinase/formimionoglutamate hydrolase, arginase family [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|212537 cd11589, Agmatinase_like_1, Agmatinase and related proteins Back     alignment and domain information
>gnl|CDD|212538 cd11592, Agmatinase_PAH, Agmatinase-like family includes proclavaminic acid amidinohydrolase Back     alignment and domain information
>gnl|CDD|233323 TIGR01230, agmatinase, agmatinase Back     alignment and domain information
>gnl|CDD|212511 cd09015, Ureohydrolase, Ureohydrolase superfamily includes arginase, formiminoglutamase, agmatinase and proclavaminate amidinohydrolase (PAH) Back     alignment and domain information
>gnl|CDD|234974 PRK01722, PRK01722, formimidoylglutamase; Provisional Back     alignment and domain information
>gnl|CDD|212513 cd09987, Arginase_HDAC, Arginase-like and histone-like hydrolases Back     alignment and domain information
>gnl|CDD|212515 cd09989, Arginase, Arginase family Back     alignment and domain information
>gnl|CDD|235011 PRK02190, PRK02190, agmatinase; Provisional Back     alignment and domain information
>gnl|CDD|212523 cd09999, Arginase-like_1, Arginase-like amidino hydrolase family Back     alignment and domain information
>gnl|CDD|233322 TIGR01227, hutG, formimidoylglutamase Back     alignment and domain information
>gnl|CDD|212514 cd09988, Formimidoylglutamase, Formimidoylglutamase or HutE Back     alignment and domain information
>gnl|CDD|162262 TIGR01229, rocF_arginase, arginase Back     alignment and domain information
>gnl|CDD|212536 cd11587, Arginase-like, Arginase types I and II and arginase-like family Back     alignment and domain information
>gnl|CDD|237499 PRK13773, PRK13773, formimidoylglutamase; Provisional Back     alignment and domain information
>gnl|CDD|237500 PRK13776, PRK13776, formimidoylglutamase; Provisional Back     alignment and domain information
>gnl|CDD|172310 PRK13772, PRK13772, formimidoylglutamase; Provisional Back     alignment and domain information
>gnl|CDD|172313 PRK13775, PRK13775, formimidoylglutamase; Provisional Back     alignment and domain information
>gnl|CDD|184317 PRK13774, PRK13774, formimidoylglutamase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 293
KOG2964361 consensus Arginase family protein [Amino acid tran 100.0
PLN02615338 arginase 100.0
TIGR01230275 agmatinase agmatinase. Note: a history of early mi 100.0
PRK13775328 formimidoylglutamase; Provisional 100.0
TIGR01227307 hutG formimidoylglutamase. Formiminoglutamase, the 100.0
PRK13774311 formimidoylglutamase; Provisional 100.0
PRK01722320 formimidoylglutamase; Provisional 100.0
COG0010305 SpeB Arginase/agmatinase/formimionoglutamate hydro 100.0
PRK13772314 formimidoylglutamase; Provisional 100.0
PRK02190301 agmatinase; Provisional 100.0
PF00491277 Arginase: Arginase family; InterPro: IPR006035 The 100.0
PRK13776318 formimidoylglutamase; Provisional 100.0
PRK13773324 formimidoylglutamase; Provisional 100.0
TIGR01229300 rocF_arginase arginase. This model helps resolve a 100.0
KOG2965318 consensus Arginase [Amino acid transport and metab 100.0
PF12640162 UPF0489: UPF0489 domain; InterPro: IPR024131 This 95.71
>KOG2964 consensus Arginase family protein [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=4.6e-70  Score=474.55  Aligned_cols=290  Identities=42%  Similarity=0.645  Sum_probs=255.3

Q ss_pred             ccccccccCCccCcEEEEcccCCCCCCCCCccchhhHHHHHHHhcCCCCCCcccCCCCCCCCcccccCCcccccccCCCC
Q 022685            2 QGELVRALGGAVASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDCGV   81 (293)
Q Consensus         2 ~~~~~~~~~~~~~~i~iiGvP~d~g~~~r~Ga~~gP~aiR~a~~~~~~~~~~~~~~~~~~~~~v~D~Gdv~~~~~~~~g~   81 (293)
                      ++++|.-.++-..++++||||+|.|+++|||+||||..||+++|+..+++.++.+.++.++++++|||||+++.++..+.
T Consensus        60 p~~~v~~~~~e~~d~AfiGvPldtgtS~rpGarFgP~~IRE~s~~~~t~n~s~e~~pfksw~~l~D~GDIpV~~yd~~~a  139 (361)
T KOG2964|consen   60 PGVLVLLSGSEDFDIAFIGVPLDTGTSYRPGARFGPSRIREASRRLNTVNPSLEGNPFKSWAKLVDCGDIPVTSYDNQGA  139 (361)
T ss_pred             CceEEEecCCCccceEEeccccCCCccCCCccccCCchhhhhhhhhcccCCCcCCccccChhhhcccCCcchhhhhhhhH
Confidence            46778878888899999999999999999999999999999999998888888888898888899999999987654332


Q ss_pred             CHHHHHHHHHHHHH-HHHhcCCCccEEeCCCCCCcHHHHHHHHHHcCCCEEEEEEccCCCCCCCCCCCccCcccHHHHHH
Q 022685           82 DDDRLMNVITESVK-LVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIM  160 (293)
Q Consensus        82 ~~~~~~~~i~~~v~-~~~~~~~~~pi~lGGdhsit~~~~~~~~~~~~~~i~vI~~DAH~D~~~~~~g~~~~~g~~~~~~~  160 (293)
                      +.......++..++ -+.+.++..|++|||||+++||++++++++|+ +++|||||||+|..++.+|+.++||++|++++
T Consensus       140 ~~q~~~~y~~l~~rkg~a~~~~~~PltLGGDHtI~yPilRAvs~k~G-PV~ilH~DaH~Dt~d~~~g~~~~Hgs~F~r~~  218 (361)
T KOG2964|consen  140 DDQIEEAYISLLARKGVAKDGPVLPLTLGGDHTIVYPILRAVSRKYG-PVSILHFDAHLDTWDPKEGGKINHGSYFYRAS  218 (361)
T ss_pred             HHHHHHHHHHHHHhhhhccCCceeeeeecCCceeeHHHHHHHHHhhC-CceEEEeccCccccCccccCccccchHHHHHh
Confidence            22222222333333 23344568999999999999999999999995 99999999999999999999999999999999


Q ss_pred             hcCCCCc--EEEEcccCCChh--hHHHHHhcCceEEecccccch--HHHHHHhhccCCcceEEEEEeccccCCCCCCCCC
Q 022685          161 EGGYARR--LLQVGIRSITKE--GREQGKRFGVEQYEMRTFSRD--RQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVS  234 (293)
Q Consensus       161 ~~~~~~~--~v~iG~r~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~~~~~~~~vyvsiDiDvldps~~pg~~  234 (293)
                      ++|..++  .+|+|+|+...+  .++.-+..|++++.+++++..  ..++++++...+...||||||+|||||++||||+
T Consensus       219 ~eGl~~~~~~iq~GIRt~~s~~~~ye~d~~~Gf~~ieare~~~~gi~~i~e~ir~~~G~k~vYiSiDID~LDPafAPgtg  298 (361)
T KOG2964|consen  219 QEGLASNDRNIQAGIRTILSGLSDYEQDKRCGFEIIEAREIDKIGIDPIVERIRQRVGDKLVYISIDIDVLDPAFAPGTG  298 (361)
T ss_pred             hcccccCCceeeeeeeecccCcCchhhccccCeEEEEeeehhhhhhHHHHHHHHHhcCCceEEEEEeecccCcccCCCCC
Confidence            9998766  999999987554  677778899999999999886  5788999877888999999999999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHhhcC-CeeEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHhhhC
Q 022685          235 HIEPGGLSFRDVLNILHNLQA-DVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK  293 (293)
Q Consensus       235 ~p~pgGlt~~el~~~l~~i~~-~vvg~Di~E~~P~~d~~~~~t~~laa~l~~~~~~~~~~  293 (293)
                      +|++||+|.+|++.||+.+.+ +++|+|+||++|.||. ++.|+++||++++|+++.|+|
T Consensus       299 tpE~gGlt~re~l~ILrglqGl~lVGaDvVEvsP~yD~-ae~Tal~AA~llfEi~s~m~K  357 (361)
T KOG2964|consen  299 TPETGGLTTREMLNILRGLQGLNLVGADVVEVSPPYDV-AEMTALAAADLLFEILSKMVK  357 (361)
T ss_pred             CCCCCCcCHHHHHHHHhhCccccccccceEEecCccch-hhhHHHHHHHHHHHHHHhccc
Confidence            999999999999999999976 9999999999999995 799999999999999999998

>PLN02615 arginase Back     alignment and domain information
>TIGR01230 agmatinase agmatinase Back     alignment and domain information
>PRK13775 formimidoylglutamase; Provisional Back     alignment and domain information
>TIGR01227 hutG formimidoylglutamase Back     alignment and domain information
>PRK13774 formimidoylglutamase; Provisional Back     alignment and domain information
>PRK01722 formimidoylglutamase; Provisional Back     alignment and domain information
>COG0010 SpeB Arginase/agmatinase/formimionoglutamate hydrolase, arginase family [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13772 formimidoylglutamase; Provisional Back     alignment and domain information
>PRK02190 agmatinase; Provisional Back     alignment and domain information
>PF00491 Arginase: Arginase family; InterPro: IPR006035 The ureohydrolase superfamily includes arginase (3 Back     alignment and domain information
>PRK13776 formimidoylglutamase; Provisional Back     alignment and domain information
>PRK13773 formimidoylglutamase; Provisional Back     alignment and domain information
>TIGR01229 rocF_arginase arginase Back     alignment and domain information
>KOG2965 consensus Arginase [Amino acid transport and metabolism] Back     alignment and domain information
>PF12640 UPF0489: UPF0489 domain; InterPro: IPR024131 This entry describes a family of uncharacterised proteins found in metazoa Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query293
3lhl_A287 Crystal Structure Of A Putative Agmatinase From Clo 1e-26
3nio_A319 Crystal Structure Of Pseudomonas Aeruginosa Guanidi 4e-26
3pzl_A313 The Crystal Structure Of Agmatine Ureohydrolase Of 3e-24
4dz4_A324 X-Ray Crystal Structure Of A Hypothetical Agmatinas 8e-23
3nip_A326 Crystal Structure Of Pseudomonas Aeruginosa Guanidi 3e-21
1wog_A305 Crystal Structure Of Agmatinase Reveals Structural 2e-20
3m1r_A322 The Crystal Structure Of Formimidoylglutamase From 4e-19
1gq6_A313 Proclavaminate Amidino Hydrolase From Streptomyces 4e-19
1cev_A299 Arginase From Bacillus Caldovelox, Native Structure 2e-13
2eiv_A291 Crystal Structure Of The Arginase From Thermus Ther 2e-11
2ef4_A290 Crystal Structure Of The Arginase From Thermus Ther 3e-11
1pq3_A306 Human Arginase Ii: Crystal Structure And Physiologi 9e-10
3mmr_A413 Structure Of Plasmodium Falciparum Arginase In Comp 1e-09
1xfk_A336 1.8a Crsytal Strucutre Of Formiminoglutamase From V 4e-09
1t5g_A314 Arginase-F2-L-Arginine Complex Length = 314 3e-08
1zpe_A314 Arginase I Covalently Modified With Butylamine At Q 3e-08
3e6v_A322 X-Ray Structure Of Human Arginase I-D183n Mutant: T 3e-08
3e6k_A322 X-Ray Structure Of Human Arginase I: The Mutant D18 3e-08
3e8q_A323 X-Ray Structure Of Rat Arginase I-T135a: The Unliga 3e-08
4ity_A330 Crystal Structure Of Leishmania Mexicana Arginase L 3e-08
1wva_A322 Crystal Structure Of Human Arginase I From Twinned 5e-08
1ta1_A314 H141c Mutant Of Rat Liver Arginase I Length = 314 6e-08
1hqg_A323 Crystal Structure Of The H141c Arginase Variant Com 7e-08
3e8z_A323 X-Ray Structure Of Rat Arginase I-N130a Mutant: The 7e-08
1t4s_A314 Arginase-L-Valine Complex Length = 314 7e-08
1tbj_A314 H141a Mutant Of Rat Liver Arginase I Length = 314 7e-08
1tbl_A314 H141n Mutant Of Rat Liver Arginase I Length = 314 7e-08
1hqx_A323 R308k Arginase Variant Length = 323 7e-08
1rla_A323 Three-Dimensional Structure Of Rat Liver Arginase, 7e-08
1tbh_A314 H141d Mutant Of Rat Liver Arginase I Length = 314 7e-08
1wvb_A322 Crystal Structure Of Human Arginase I: The Mutant E 7e-08
2rla_A323 Altering The Binuclear Manganese Cluster Of Arginas 7e-08
1p8o_A314 Structural And Functional Importance Of First-Shell 2e-07
1p8q_A314 Structural And Functional Importance Of First-Shell 2e-07
1p8m_A314 Structural And Functional Importance Of First-shell 2e-07
3rla_A323 Altering The Binuclear Manganese Cluster Of Arginas 5e-07
1p8p_A314 Structural And Functional Importance Of First-shell 5e-07
1p8n_A314 Structural And Functional Importance Of First-shell 5e-07
1p8s_A314 Structural And Functional Importance Of First-Shell 6e-07
1p8r_A308 Structural And Functional Importance Of First-Shell 7e-07
4g3h_A330 Crystal Structure Of Helicobacter Pylori Arginase L 2e-05
2a0m_A316 Arginase Superfamily Protein From Trypanosoma Cruzi 4e-04
>pdb|3LHL|A Chain A, Crystal Structure Of A Putative Agmatinase From Clostridium Difficile Length = 287 Back     alignment and structure 
Iteration: 1

 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 17/278 (6%)
Query: 18  LLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIR 77
           + GV     +S   G  FA    R+  +   T S   +  +L D  +  D GD+ +    
Sbjct: 12  VFGVGFDGTTSNRPGARFASSSXRKEFYGLETYSPFLD-LDLEDYNI-CDYGDLEIS--- 66
Query: 78  DCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDA 137
             G  +  L  +  E+ K+V   D   P  +GG+H ++ P  +AV EK    + V+H DA
Sbjct: 67  -VGSTEQVLKEIYQETYKIV--RDSKVPFXIGGEHLVTLPAFKAVHEKYN-DIYVIHFDA 122
Query: 138 HPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEMRTF 197
           H D+ + +  +K SHA+   RI +     ++ Q GIRS TKE      +F  E+      
Sbjct: 123 HTDLREEYNNSKNSHATVIKRIWDIVGDNKIFQFGIRSGTKEEF----KFATEEKHTYXE 178
Query: 198 SRDRQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFR---DVLNILHNLQ 254
                  EN+      K +Y+++D+D LD +  PG    EPGG+++R   ++  I+ N  
Sbjct: 179 IGGIDTFENIVNXLNGKNIYLTIDLDVLDASVFPGTGTPEPGGVNYREFQEIFKIIKNSN 238
Query: 255 ADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKIS 292
            ++V  D+VE +P  DT  G++ ++A K++REL   IS
Sbjct: 239 INIVGCDIVELSPDYDTT-GVSTVIACKILRELCLIIS 275
>pdb|3NIO|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Guanidinobutyrase Length = 319 Back     alignment and structure
>pdb|3PZL|A Chain A, The Crystal Structure Of Agmatine Ureohydrolase Of Thermoplasma Volcanium Length = 313 Back     alignment and structure
>pdb|4DZ4|A Chain A, X-Ray Crystal Structure Of A Hypothetical Agmatinase From Burkholderia Thailandensis Length = 324 Back     alignment and structure
>pdb|3NIP|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Guanidinopropionase Complexed With 1,6-Diaminohexane Length = 326 Back     alignment and structure
>pdb|1WOG|A Chain A, Crystal Structure Of Agmatinase Reveals Structural Conservation And Inhibition Mechanism Of The Ureohydrolase Superfamily Length = 305 Back     alignment and structure
>pdb|3M1R|A Chain A, The Crystal Structure Of Formimidoylglutamase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 322 Back     alignment and structure
>pdb|1GQ6|A Chain A, Proclavaminate Amidino Hydrolase From Streptomyces Clavuligerus Length = 313 Back     alignment and structure
>pdb|1CEV|A Chain A, Arginase From Bacillus Caldovelox, Native Structure At Ph 5.6 Length = 299 Back     alignment and structure
>pdb|2EIV|A Chain A, Crystal Structure Of The Arginase From Thermus Thermophilus Length = 291 Back     alignment and structure
>pdb|2EF4|A Chain A, Crystal Structure Of The Arginase From Thermus Thermophilus Length = 290 Back     alignment and structure
>pdb|1PQ3|A Chain A, Human Arginase Ii: Crystal Structure And Physiological Role In Male And Female Sexual Arousal Length = 306 Back     alignment and structure
>pdb|3MMR|A Chain A, Structure Of Plasmodium Falciparum Arginase In Complex With Abh Length = 413 Back     alignment and structure
>pdb|1XFK|A Chain A, 1.8a Crsytal Strucutre Of Formiminoglutamase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 Length = 336 Back     alignment and structure
>pdb|1T5G|A Chain A, Arginase-F2-L-Arginine Complex Length = 314 Back     alignment and structure
>pdb|1ZPE|A Chain A, Arginase I Covalently Modified With Butylamine At Q19c Length = 314 Back     alignment and structure
>pdb|3E6V|A Chain A, X-Ray Structure Of Human Arginase I-D183n Mutant: The Complex With Abh Length = 322 Back     alignment and structure
>pdb|3E6K|A Chain A, X-Ray Structure Of Human Arginase I: The Mutant D183a In Complex With Abh Length = 322 Back     alignment and structure
>pdb|3E8Q|A Chain A, X-Ray Structure Of Rat Arginase I-T135a: The Unliganded Complex Length = 323 Back     alignment and structure
>pdb|4ITY|A Chain A, Crystal Structure Of Leishmania Mexicana Arginase Length = 330 Back     alignment and structure
>pdb|1WVA|A Chain A, Crystal Structure Of Human Arginase I From Twinned Crystal Length = 322 Back     alignment and structure
>pdb|1TA1|A Chain A, H141c Mutant Of Rat Liver Arginase I Length = 314 Back     alignment and structure
>pdb|1HQG|A Chain A, Crystal Structure Of The H141c Arginase Variant Complexed With Products Ornithine And Urea Length = 323 Back     alignment and structure
>pdb|3E8Z|A Chain A, X-Ray Structure Of Rat Arginase I-N130a Mutant: The Unliganded Complex Length = 323 Back     alignment and structure
>pdb|1T4S|A Chain A, Arginase-L-Valine Complex Length = 314 Back     alignment and structure
>pdb|1TBJ|A Chain A, H141a Mutant Of Rat Liver Arginase I Length = 314 Back     alignment and structure
>pdb|1TBL|A Chain A, H141n Mutant Of Rat Liver Arginase I Length = 314 Back     alignment and structure
>pdb|1HQX|A Chain A, R308k Arginase Variant Length = 323 Back     alignment and structure
>pdb|1RLA|A Chain A, Three-Dimensional Structure Of Rat Liver Arginase, The Binuclear Manganese Metalloenzyme Of The Urea Cycle Length = 323 Back     alignment and structure
>pdb|1TBH|A Chain A, H141d Mutant Of Rat Liver Arginase I Length = 314 Back     alignment and structure
>pdb|1WVB|A Chain A, Crystal Structure Of Human Arginase I: The Mutant E256q Length = 322 Back     alignment and structure
>pdb|2RLA|A Chain A, Altering The Binuclear Manganese Cluster Of Arginase Diminishes Thermostability And Catalytic Function Length = 323 Back     alignment and structure
>pdb|1P8O|A Chain A, Structural And Functional Importance Of First-Shell Metal Ligands In The Binuclear Manganese Cluster Of Arginase I. Length = 314 Back     alignment and structure
>pdb|1P8Q|A Chain A, Structural And Functional Importance Of First-Shell Metal Ligands In The Binuclear Cluster Of Arginase I. Length = 314 Back     alignment and structure
>pdb|1P8M|A Chain A, Structural And Functional Importance Of First-shell Metal Ligands In The Binuclear Manganese Cluster Of Arginase I. Length = 314 Back     alignment and structure
>pdb|3RLA|A Chain A, Altering The Binuclear Manganese Cluster Of Arginase Diminishes Thermostability And Catalytic Function Length = 323 Back     alignment and structure
>pdb|1P8P|A Chain A, Structural And Functional Importance Of First-shell Metal Ligands In The Binuclear Manganese Cluster Of Arginase I. Length = 314 Back     alignment and structure
>pdb|1P8N|A Chain A, Structural And Functional Importance Of First-shell Metal Ligands In The Binuclear Manganese Cluster Of Arginase I. Length = 314 Back     alignment and structure
>pdb|1P8S|A Chain A, Structural And Functional Importance Of First-Shell Metal Ligands In The Binuclear Manganese Cluster Of Arginase I. Length = 314 Back     alignment and structure
>pdb|1P8R|A Chain A, Structural And Functional Importance Of First-Shell Metal Ligands In The Binuclear Manganese Cluster Of Arginase I. Length = 308 Back     alignment and structure
>pdb|4G3H|A Chain A, Crystal Structure Of Helicobacter Pylori Arginase Length = 330 Back     alignment and structure
>pdb|2A0M|A Chain A, Arginase Superfamily Protein From Trypanosoma Cruzi Length = 316 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query293
3pzl_A313 Agmatine ureohydrolase; structural genomics, PSI-2 6e-75
3lhl_A287 Putative agmatinase; protein structure initiative 7e-70
2a0m_A316 Arginase superfamily protein; structural genomics, 2e-66
3m1r_A322 Formimidoylglutamase; structural genomics, PSI-2, 1e-65
1woh_A305 Agmatinase; alpha/beta fold, hydrolase; 1.75A {Dei 8e-65
4dz4_A324 Agmatinase; hydrolase; 1.70A {Burkholderia thailan 2e-63
1gq6_A313 Proclavaminate amidino hydrolase; clavaminic, PAH, 2e-62
1xfk_A336 Formimidoylglutamase; formiminoglutamase protein, 3e-61
3niq_A326 3-guanidinopropionase; GPUA, hydrolase; 2.07A {Pse 1e-57
2cev_A299 Protein (arginase); enzyme, hydrolase, arginine hy 6e-55
3nio_A319 Guanidinobutyrase; PA1421, GBUA, hydrolase; HET: M 2e-54
2ef5_A290 Arginase; TTHA1496, structural genomic NPPSFA, nat 3e-52
1pq3_A306 Arginase II, mitochondrial precursor; biosynthetic 1e-50
4g3h_A330 Arginase (ROCF); rossmann fold, hydrolytic enzyme, 1e-49
2aeb_A322 Arginase 1; hydrolase, binuclear manganese cluster 8e-49
3sl1_A413 Arginase; metallohydrolase, hydrolase-hydrolase in 2e-48
>3pzl_A Agmatine ureohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.70A {Thermoplasma volcanium GSS1} Length = 313 Back     alignment and structure
 Score =  230 bits (590), Expect = 6e-75
 Identities = 85/281 (30%), Positives = 143/281 (50%), Gaps = 25/281 (8%)

Query: 18  LLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTT---EEGKELNDPRVLTDVGDVPVQ 74
           + G+P  + SS+ +G  +AP  IR A      N  +     G +L    +  D+GD+   
Sbjct: 39  VFGIPFDNTSSYRRGSKYAPDSIRGA----YVNLESYEYSYGIDLLASGMA-DLGDMEES 93

Query: 75  EIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLH 134
                  D + +++ +   V  VM +  + P++LGG+HSI+   +RA+ + +     ++ 
Sbjct: 94  ------EDVEYVIDTVESVVSAVMSDGKI-PIMLGGEHSITVGAVRALPKDVD----LVI 142

Query: 135 LDAHPDIYDAFEGNKYSHASSFARIMEGGYARRLLQVGIRSITKEGREQGKRFGVEQYEM 194
           +DAH D   ++ GNKY+HA    R ++     R+  +GIRS+++E  E      V     
Sbjct: 143 VDAHSDFRSSYMGNKYNHACVTRRALDLLGEGRITSIGIRSVSREEFEDPDFRKVSFISS 202

Query: 195 RTFSRD--RQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHN 252
               ++   +++E +      + VYISVD+D +DPA+AP V   EP GL+  DV  ++  
Sbjct: 203 FDVKKNGIDKYIEEVD--RKSRRVYISVDMDGIDPAYAPAVGTPEPFGLADTDVRRLIER 260

Query: 253 LQADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 293
           L    V  D+VEF+P  D   G T+M+AAKL++   A   K
Sbjct: 261 LSYKAVGFDIVEFSPLYDN--GNTSMLAAKLLQVFIASREK 299
>3lhl_A Putative agmatinase; protein structure initiative II(PSI II), nysgxrc structural genomics, NEW YORK SGX research center for struc genomics; 2.30A {Clostridium difficile} Length = 287 Back     alignment and structure
>2a0m_A Arginase superfamily protein; structural genomics, PSI, protein structure initia structural genomics of pathogenic protozoa consortium; 1.60A {Trypanosoma cruzi} SCOP: c.42.1.1 Length = 316 Back     alignment and structure
>3m1r_A Formimidoylglutamase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: CAC; 2.20A {Bacillus subtilis} Length = 322 Back     alignment and structure
>1woh_A Agmatinase; alpha/beta fold, hydrolase; 1.75A {Deinococcus radiodurans} SCOP: c.42.1.1 PDB: 1wog_A 1woi_A Length = 305 Back     alignment and structure
>4dz4_A Agmatinase; hydrolase; 1.70A {Burkholderia thailandensis} Length = 324 Back     alignment and structure
>1gq6_A Proclavaminate amidino hydrolase; clavaminic, PAH, arginase, antibioti; 1.75A {Streptomyces clavuligerus} SCOP: c.42.1.1 PDB: 1gq7_A Length = 313 Back     alignment and structure
>1xfk_A Formimidoylglutamase; formiminoglutamase protein, vibrio cholerae O1 biovar eltor, structure genomics, protein structure initiative, MCSG; 1.80A {Vibrio cholerae} SCOP: c.42.1.1 Length = 336 Back     alignment and structure
>3niq_A 3-guanidinopropionase; GPUA, hydrolase; 2.07A {Pseudomonas aeruginosa} PDB: 3nip_A Length = 326 Back     alignment and structure
>2cev_A Protein (arginase); enzyme, hydrolase, arginine hydrolysis, nitrogen metabolism, manganese metalloenzyme; 2.15A {Bacillus caldovelox} SCOP: c.42.1.1 PDB: 1cev_A 3cev_A* 4cev_A 5cev_A* Length = 299 Back     alignment and structure
>3nio_A Guanidinobutyrase; PA1421, GBUA, hydrolase; HET: MLY; 2.00A {Pseudomonas aeruginosa} Length = 319 Back     alignment and structure
>2ef5_A Arginase; TTHA1496, structural genomic NPPSFA, national project on protein structural and function analyses; HET: LYS; 2.00A {Thermus thermophilus} PDB: 2ef4_A* 2eiv_A Length = 290 Back     alignment and structure
>1pq3_A Arginase II, mitochondrial precursor; biosynthetic protein, hydrolase; HET: S2C; 2.70A {Homo sapiens} SCOP: c.42.1.1 Length = 306 Back     alignment and structure
>4g3h_A Arginase (ROCF); rossmann fold, hydrolytic enzyme, manganous ION BI hydrolysis, hydrolase; 2.20A {Helicobacter pylori} Length = 330 Back     alignment and structure
>2aeb_A Arginase 1; hydrolase, binuclear manganese cluster, boronic acid inhibit perfectly twinned crystal; HET: ABH; 1.29A {Homo sapiens} SCOP: c.42.1.1 PDB: 1wva_A* 2pha_A 2pho_A 2pll_A* 2zav_A 3dj8_A* 3f80_A* 3gmz_A 3gn0_A* 3kv2_A* 3lp4_A* 3lp7_A* 3mfv_A* 3mfw_A* 3mjl_A 3sjt_A* 3skk_A* 3tf3_A 3th7_A 3the_A* ... Length = 322 Back     alignment and structure
>3sl1_A Arginase; metallohydrolase, hydrolase-hydrolase inhibit complex; HET: FB6; 1.90A {Plasmodium falciparum} PDB: 3mmr_A* 3sl0_A* Length = 413 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query293
3nio_A319 Guanidinobutyrase; PA1421, GBUA, hydrolase; HET: M 100.0
3m1r_A322 Formimidoylglutamase; structural genomics, PSI-2, 100.0
3lhl_A287 Putative agmatinase; protein structure initiative 100.0
3niq_A326 3-guanidinopropionase; GPUA, hydrolase; 2.07A {Pse 100.0
1gq6_A313 Proclavaminate amidino hydrolase; clavaminic, PAH, 100.0
3pzl_A313 Agmatine ureohydrolase; structural genomics, PSI-2 100.0
1woh_A305 Agmatinase; alpha/beta fold, hydrolase; 1.75A {Dei 100.0
4dz4_A324 Agmatinase; hydrolase; 1.70A {Burkholderia thailan 100.0
2a0m_A316 Arginase superfamily protein; structural genomics, 100.0
1xfk_A336 Formimidoylglutamase; formiminoglutamase protein, 100.0
2cev_A299 Protein (arginase); enzyme, hydrolase, arginine hy 100.0
2ef5_A290 Arginase; TTHA1496, structural genomic NPPSFA, nat 100.0
4g3h_A330 Arginase (ROCF); rossmann fold, hydrolytic enzyme, 100.0
2aeb_A322 Arginase 1; hydrolase, binuclear manganese cluster 100.0
1pq3_A306 Arginase II, mitochondrial precursor; biosynthetic 100.0
3sl1_A413 Arginase; metallohydrolase, hydrolase-hydrolase in 100.0
>3nio_A Guanidinobutyrase; PA1421, GBUA, hydrolase; HET: MLY; 2.00A {Pseudomonas aeruginosa} SCOP: c.42.1.0 Back     alignment and structure
Probab=100.00  E-value=2.6e-65  Score=468.62  Aligned_cols=271  Identities=28%  Similarity=0.528  Sum_probs=235.8

Q ss_pred             cCcEEEEcccCCCCCCCCCccchhhHHHHHHHhcCCCCCCcccCCC-CCCCCcccccCCcccccccCCCCCHHHHHHHHH
Q 022685           13 VASTSLLGVPLGHNSSFLQGPAFAPPRIREAIWCGSTNSTTEEGKE-LNDPRVLTDVGDVPVQEIRDCGVDDDRLMNVIT   91 (293)
Q Consensus        13 ~~~i~iiGvP~d~g~~~r~Ga~~gP~aiR~a~~~~~~~~~~~~~~~-~~~~~~v~D~Gdv~~~~~~~~g~~~~~~~~~i~   91 (293)
                      +++|+|+|+|||.|+++|+|+++||+|||++++.+..+. .+.+.+ +... .++|+||+.+.+     .+.++++++++
T Consensus        37 ~~~i~iiGvP~D~g~s~r~Ga~~GP~aIR~as~~l~~~~-~~~~~~~~~~~-~v~D~Gdv~~~~-----~~~~~~~~~i~  109 (319)
T 3nio_A           37 ALDAAFVGVPLDIGTSLRSGTRFGPREIRAESVMIRPYN-MATGAAPFDSL-NVADIGDVAINT-----FNLLEAVRIIE  109 (319)
T ss_dssp             TCSEEEEECCCCTTCSSCCCGGGHHHHHHHHGGGCCSEE-TTTCBCGGGTS-CEEEEEECCCCT-----TCHHHHHHHHH
T ss_pred             CCCEEEEeeeeCCCCCCCchHHHHHHHHHHHhhhccccC-cccCcccccCC-cEEEecCCCCCC-----CCHHHHHHHHH
Confidence            489999999999999999999999999999998765432 222322 2233 489999998754     36889999999


Q ss_pred             HHHHHHHhcCCCccEEeCCCCCCcHHHHHHHHHHcCCCEEEEEEccCCCCCCCCCCCccCcccHHHHHHhcCC--CCcEE
Q 022685           92 ESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGY--ARRLL  169 (293)
Q Consensus        92 ~~v~~~~~~~~~~pi~lGGdhsit~~~~~~~~~~~~~~i~vI~~DAH~D~~~~~~g~~~~~g~~~~~~~~~~~--~~~~v  169 (293)
                      +.++.+++++ .+||+|||||++|+|.++++++++ ++++|||||||+|+++++.|+.++|||||+++++++.  +++++
T Consensus       110 ~~v~~~l~~g-~~pi~lGGdHsit~~~~~al~~~~-~~l~vI~~DAH~Dl~~~~~g~~~~hG~~~~~~~~~~~~~~~~~~  187 (319)
T 3nio_A          110 QEYDRILGHG-ILPLTLGGDHTITLPILRAIXKXH-GXVGLVHVDAHADVNDHMFGEXIAHGTTFRRAVEEDLLDCDRVV  187 (319)
T ss_dssp             HHHHHHHHTT-CEEEEECCCGGGHHHHHHHHHHHH-CSEEEEEECSSCCCCSCBTTBSCSTTTHHHHHHHTTCEEEEEEE
T ss_pred             HHHHHHHHCC-CEEEEECCcchhhHHHHHHHHhhc-CceEEEEEecCcccCCCCCccccccccHHHHHhhccCCCCCcEE
Confidence            9999999887 799999999999999999999988 5899999999999999888888999999999999864  47999


Q ss_pred             EEcccC--CChhhHHHHHhcCceEEecccccch--HHHHHHhhccCCcceEEEEEeccccCCCCCCCCCCCCCCCCCHHH
Q 022685          170 QVGIRS--ITKEGREQGKRFGVEQYEMRTFSRD--RQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLSFRD  245 (293)
Q Consensus       170 ~iG~r~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~~~~~~~~vyvsiDiDvldps~~pg~~~p~pgGlt~~e  245 (293)
                      +||+|+  .+++|++++++.|+++++++++.+.  ..+++.+....+.++||||||+|||||+++|||++|+|||||++|
T Consensus       188 ~iGiR~~~~~~~e~~~~~~~g~~~~~~~ei~~~g~~~v~~~~~~~~~~~~vylSiDiDvLDpa~aPgtgtp~pgGlt~~e  267 (319)
T 3nio_A          188 QIGLRAQGYTAEDFNWSRXQGFRVVQAEECWHXSLEPLMAEVREXVGGGPVYLSFDIDGIDPAWAPGTGTPEIGGLTTIQ  267 (319)
T ss_dssp             EEEECSEESSTHHHHHHHHHTCEEEEGGGTTTCCSHHHHHHHHHHHCSSEEEEEEEGGGBCTTTCCCBSSCCSSCBCHHH
T ss_pred             EEEeCCCCCCHHHHHHHHhcCcEEEEHHHhhhcCHHHHHHHHHHhcCCCcEEEEEecCccChhhCCCCCCCCCCCCCHHH
Confidence            999998  5889999999999999999998753  445554432223579999999999999999999999999999999


Q ss_pred             HHHHHHhhc-CCeeEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHhhhC
Q 022685          246 VLNILHNLQ-ADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK  293 (293)
Q Consensus       246 l~~~l~~i~-~~vvg~Di~E~~P~~d~~~~~t~~laa~l~~~~~~~~~~  293 (293)
                      ++++++.+. .+++|+||||+||.+|. +++|+.+||+++++++..+++
T Consensus       268 ~~~~l~~l~~~~vvg~DivEv~P~~D~-~~~Ta~laa~li~~~l~~~~~  315 (319)
T 3nio_A          268 AMEIIRGCQGLDLIGCDLVEVSPPYDT-TGNTSLLGANLLYEMLCVLPG  315 (319)
T ss_dssp             HHHHHHTTTTSEEEEEEEECBCGGGCS-SSHHHHHHHHHHHHHHHTSTT
T ss_pred             HHHHHHHhccCCeeEEEEEEECCCCCC-CCcHHHHHHHHHHHHHHHHHH
Confidence            999999985 48999999999999996 589999999999999998864
>3m1r_A Formimidoylglutamase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: CAC; 2.20A {Bacillus subtilis} Back     alignment and structure
>3lhl_A Putative agmatinase; protein structure initiative II(PSI II), nysgxrc structural genomics, NEW YORK SGX research center for struc genomics; 2.30A {Clostridium difficile} Back     alignment and structure
>3niq_A 3-guanidinopropionase; GPUA, hydrolase; 2.07A {Pseudomonas aeruginosa} PDB: 3nip_A Back     alignment and structure
>1gq6_A Proclavaminate amidino hydrolase; clavaminic, PAH, arginase, antibioti; 1.75A {Streptomyces clavuligerus} SCOP: c.42.1.1 PDB: 1gq7_A Back     alignment and structure
>3pzl_A Agmatine ureohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.70A {Thermoplasma volcanium GSS1} Back     alignment and structure
>1woh_A Agmatinase; alpha/beta fold, hydrolase; 1.75A {Deinococcus radiodurans} SCOP: c.42.1.1 PDB: 1wog_A 1woi_A Back     alignment and structure
>4dz4_A Agmatinase; hydrolase; 1.70A {Burkholderia thailandensis} Back     alignment and structure
>2a0m_A Arginase superfamily protein; structural genomics, PSI, protein structure initia structural genomics of pathogenic protozoa consortium; 1.60A {Trypanosoma cruzi} SCOP: c.42.1.1 Back     alignment and structure
>1xfk_A Formimidoylglutamase; formiminoglutamase protein, vibrio cholerae O1 biovar eltor, structure genomics, protein structure initiative, MCSG; 1.80A {Vibrio cholerae} SCOP: c.42.1.1 Back     alignment and structure
>2cev_A Protein (arginase); enzyme, hydrolase, arginine hydrolysis, nitrogen metabolism, manganese metalloenzyme; 2.15A {Bacillus caldovelox} SCOP: c.42.1.1 PDB: 1cev_A 3cev_A* 4cev_A 5cev_A* Back     alignment and structure
>2ef5_A Arginase; TTHA1496, structural genomic NPPSFA, national project on protein structural and function analyses; HET: LYS; 2.00A {Thermus thermophilus} PDB: 2ef4_A* 2eiv_A Back     alignment and structure
>4g3h_A Arginase (ROCF); rossmann fold, hydrolytic enzyme, manganous ION BI hydrolysis, hydrolase; 2.20A {Helicobacter pylori} Back     alignment and structure
>2aeb_A Arginase 1; hydrolase, binuclear manganese cluster, boronic acid inhibit perfectly twinned crystal; HET: ABH; 1.29A {Homo sapiens} SCOP: c.42.1.1 PDB: 1wva_A* 2pha_A 2pho_A 2pll_A* 2zav_A 3dj8_A* 3f80_A* 3gmz_A 3gn0_A* 3kv2_A* 3lp4_A* 3lp7_A* 3mfv_A* 3mfw_A* 3mjl_A 3sjt_A* 3skk_A* 3tf3_A 3th7_A 3the_A* ... Back     alignment and structure
>1pq3_A Arginase II, mitochondrial precursor; biosynthetic protein, hydrolase; HET: S2C; 2.70A {Homo sapiens} SCOP: c.42.1.1 Back     alignment and structure
>3sl1_A Arginase; metallohydrolase, hydrolase-hydrolase inhibit complex; HET: FB6; 1.90A {Plasmodium falciparum} PDB: 3mmr_A* 3sl0_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 293
d1xfka_324 c.42.1.1 (A:) Formimidoylglutamase HutG {Vibrio ch 5e-43
d1gq6a_301 c.42.1.1 (A:) Proclavaminate amidino hydrolase {St 2e-40
d1woha_303 c.42.1.1 (A:) Agmatinase {Deinococcus radiodurans 2e-40
d2ceva_298 c.42.1.1 (A:) Arginase {Bacillus caldovelox [TaxId 5e-37
d1pq3a_306 c.42.1.1 (A:) Arginase {Human (Homo sapiens), isof 7e-37
d2aeba1309 c.42.1.1 (A:5-313) Arginase {Human (Homo sapiens) 4e-36
d2a0ma1298 c.42.1.1 (A:13-310) Arginase {Trypanosoma cruzi [T 2e-34
>d1xfka_ c.42.1.1 (A:) Formimidoylglutamase HutG {Vibrio cholerae [TaxId: 666]} Length = 324 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Arginase/deacetylase
superfamily: Arginase/deacetylase
family: Arginase-like amidino hydrolases
domain: Formimidoylglutamase HutG
species: Vibrio cholerae [TaxId: 666]

 Score =  147 bits (372), Expect = 5e-43
 Identities = 57/300 (19%), Positives = 116/300 (38%), Gaps = 42/300 (14%)

Query: 18  LLGVPLGHNSSFLQ---GPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQ 74
           L+G          +   G   AP  I++A+               + P  + D+G++  +
Sbjct: 38  LIGFECDAGVERNKGRTGAKHAPSLIKQALA----------NLAWHHPIPIYDLGNIRCE 87

Query: 75  EIRDCGVDDDRLMNVITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLG------G 128
                G + ++      + ++  +       +VLGG H I++   + +++          
Sbjct: 88  -----GDELEQAQQECAQVIQQALPHA--RAIVLGGGHEIAWATFQGLAQHFLATGVKQP 140

Query: 129 PVDVLHLDAHPDIYDA---FEGNKYSHASSFARIMEGGYAR------RLLQVGIRSITKE 179
            + +++ DAH D+          + S  + F +I      +        L V   S T  
Sbjct: 141 RIGIINFDAHFDLRTFESELAPVRPSSGTPFNQIHHFCQQQGWDFHYACLGVSRASNTPA 200

Query: 180 GREQGKRFGVEQYEMRTFSRDRQF---LENLKLGEGVKGVYISVDVDCLDPAFAPGVSHI 236
             E+  + GV   E + FS         +     +    +Y+++D+D    A APGVS  
Sbjct: 201 LFERADKLGVWYVEDKAFSPLSLKDHLTQLQHFIDDCDYLYLTIDLDVFPAASAPGVSAP 260

Query: 237 EPGGLSFRDVLNILHNLQA---DVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK 293
              G+S   +      +      ++ AD+ E+NP  D +D  TA +AA+L  ++   +++
Sbjct: 261 AARGVSLEALAPYFDRILHYKNKLMIADIAEYNPSFD-IDQHTARLAARLCWDIANAMAE 319
>d1gq6a_ c.42.1.1 (A:) Proclavaminate amidino hydrolase {Streptomyces clavuligerus [TaxId: 1901]} Length = 301 Back     information, alignment and structure
>d1woha_ c.42.1.1 (A:) Agmatinase {Deinococcus radiodurans [TaxId: 1299]} Length = 303 Back     information, alignment and structure
>d2ceva_ c.42.1.1 (A:) Arginase {Bacillus caldovelox [TaxId: 33931]} Length = 298 Back     information, alignment and structure
>d1pq3a_ c.42.1.1 (A:) Arginase {Human (Homo sapiens), isoform II, mitochondrial [TaxId: 9606]} Length = 306 Back     information, alignment and structure
>d2aeba1 c.42.1.1 (A:5-313) Arginase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 Back     information, alignment and structure
>d2a0ma1 c.42.1.1 (A:13-310) Arginase {Trypanosoma cruzi [TaxId: 5693]} Length = 298 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query293
d2a0ma1298 Arginase {Trypanosoma cruzi [TaxId: 5693]} 100.0
d1gq6a_301 Proclavaminate amidino hydrolase {Streptomyces cla 100.0
d1woha_303 Agmatinase {Deinococcus radiodurans [TaxId: 1299]} 100.0
d1xfka_324 Formimidoylglutamase HutG {Vibrio cholerae [TaxId: 100.0
d2ceva_298 Arginase {Bacillus caldovelox [TaxId: 33931]} 100.0
d2aeba1309 Arginase {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1pq3a_306 Arginase {Human (Homo sapiens), isoform II, mitoch 100.0
>d2a0ma1 c.42.1.1 (A:13-310) Arginase {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Arginase/deacetylase
superfamily: Arginase/deacetylase
family: Arginase-like amidino hydrolases
domain: Arginase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=1.8e-62  Score=444.42  Aligned_cols=270  Identities=19%  Similarity=0.252  Sum_probs=231.6

Q ss_pred             ccCcEEEEcccCCCCC---CCCCccchhhHHHHHHHhcCCCCCCcccCCCCCCCCcccccCCcccccccCCCCCHHHHHH
Q 022685           12 AVASTSLLGVPLGHNS---SFLQGPAFAPPRIREAIWCGSTNSTTEEGKELNDPRVLTDVGDVPVQEIRDCGVDDDRLMN   88 (293)
Q Consensus        12 ~~~~i~iiGvP~d~g~---~~r~Ga~~gP~aiR~a~~~~~~~~~~~~~~~~~~~~~v~D~Gdv~~~~~~~~g~~~~~~~~   88 (293)
                      -++||+|+|+|+|.|+   ++|+|+++||++||+++..+..+...+.+.++..+ +++|+||+...       +.+++++
T Consensus        16 e~adi~ilGvP~D~g~~~~~~r~Ga~~gP~aiR~a~~~l~~~~~~~~~~~~~~~-~i~D~Gdv~~~-------~~~~~~~   87 (298)
T d2a0ma1          16 EDADIVIIGFPYDEGCVRNGGRAGAKKGPAAFRFFLQRLGSVNNLELNVDASHL-KLYDAGDITAS-------TLEEAHE   87 (298)
T ss_dssp             GGCSEEEEEECCCHHHHHTTCCSCGGGHHHHHHHHHTTCCBSEETTTTEECTTC-CEEEEEECCCS-------SHHHHHH
T ss_pred             cCCCEEEEEEecccCccCCCCCCCHHHHHHHHHHHHHhccccCcccccCCcccC-eeeccCCCCcC-------cHHHHHH
Confidence            3599999999999986   68999999999999999876544322333344443 47999999763       5688999


Q ss_pred             HHHHHHHHHHhcCCCccEEeCCCCCCcHHHHHHHHHHcCCCEEEEEEccCCCCCCCCCCCccCcccHHHHHHhcCC--CC
Q 022685           89 VITESVKLVMEEDPLHPLVLGGDHSISFPVIRAVSEKLGGPVDVLHLDAHPDIYDAFEGNKYSHASSFARIMEGGY--AR  166 (293)
Q Consensus        89 ~i~~~v~~~~~~~~~~pi~lGGdhsit~~~~~~~~~~~~~~i~vI~~DAH~D~~~~~~g~~~~~g~~~~~~~~~~~--~~  166 (293)
                      ++++.++.+++++ .+||+||||||+|||.++|++++++++++|||||||+|+++++.+..++||||++++++.+.  ++
T Consensus        88 ~i~~~v~~~~~~g-~~pivlGGdHsit~~~~~a~~~~~~~~i~vI~~DAH~D~~~~~~~~~~~~g~~~~~~~~~~~~~~~  166 (298)
T d2a0ma1          88 KLESKVFTVLARG-AFPFVIGGGNDQSAPNGRAMLRAFPGDVGVINVDSHLDVRPPLQDGRVHSGTPFRQLLEESSFSGK  166 (298)
T ss_dssp             HHHHHHHHHHHTT-CEEEEEESCGGGHHHHHHHHHHHSTTCCEEEEECSSCCCCCCCTTSCCCTTCHHHHHHTCTTCCGG
T ss_pred             HHHHHHHHHHhCC-CeeeeecCCcchhHHHHhhhhhccCccceEEEecccccccccccCCcccCCchhhhhhhhcccccc
Confidence            9999999999887 79999999999999999999998878999999999999999888778899999999999864  57


Q ss_pred             cEEEEcccCC--ChhhHHHHHhcCceEEecccccch--HHHHHHhhccCCcceEEEEEeccccCCCCCCCCCCCCCCCCC
Q 022685          167 RLLQVGIRSI--TKEGREQGKRFGVEQYEMRTFSRD--RQFLENLKLGEGVKGVYISVDVDCLDPAFAPGVSHIEPGGLS  242 (293)
Q Consensus       167 ~~v~iG~r~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~~~~~~~~vyvsiDiDvldps~~pg~~~p~pgGlt  242 (293)
                      +++++|+|+.  .+++++++++.++.++++.+++..  ...++.+.. ...+++|||||+|||||++||||++|+||||+
T Consensus       167 ~~~~iG~r~~~~~~~~~~~~~~~~~~~~~~~ei~~~g~~~~~~~~~~-~~~~~vylSiDiDvlDps~aPgt~tP~pgGLs  245 (298)
T d2a0ma1         167 RFVEFACQGSQCGALHAQYVRDHQGHLMWLSEVRKKGAVAALEDAFG-LTGKNTFFSFDVDSLKSSDMPGVSCPAAVGLS  245 (298)
T ss_dssp             GEEEEEECTTTSCHHHHHHHHHTTCEEEEHHHHHHHCHHHHHHHHHH-HHCSSEEEEEEGGGBBTTTCCCBSSCBSSCBC
T ss_pred             ceeEEEecccccCHHHHHHHhhcceeEeehhhhhhccHHHHHHHHHH-hcCCceEEEEeeccccHHHhcccCCCCCCCcC
Confidence            9999999986  467788999999999999988654  334444321 12368999999999999999999999999999


Q ss_pred             HHHHHHHHHhhc--CCeeEEEEeeecCCCCCCCCHHHHHHHHHHHHHHHhhhC
Q 022685          243 FRDVLNILHNLQ--ADVVAADVVEFNPQRDTVDGMTAMVAAKLVRELTAKISK  293 (293)
Q Consensus       243 ~~el~~~l~~i~--~~vvg~Di~E~~P~~d~~~~~t~~laa~l~~~~~~~~~~  293 (293)
                      ++|++++++.+.  .+++|+||+|+||.+|.  ++|+++||+++++++.++++
T Consensus       246 ~~e~~~~l~~~~~~~~v~g~divE~~P~~D~--~~t~~laa~~i~~~l~g~~~  296 (298)
T d2a0ma1         246 AQEAFDMCFLAGKTPTVMMMDMSELNPLVEE--YRSPRVAVYMFYHFVLGFAT  296 (298)
T ss_dssp             HHHHHHHHHHHHHCTTEEEEEEECBCTTTCC--SHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhCCCCEEEEEEEEECCCCCC--CHHHHHHHHHHHHHHHHHhc
Confidence            999999999983  59999999999999994  68999999999999999864
>d1gq6a_ c.42.1.1 (A:) Proclavaminate amidino hydrolase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1woha_ c.42.1.1 (A:) Agmatinase {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1xfka_ c.42.1.1 (A:) Formimidoylglutamase HutG {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d2ceva_ c.42.1.1 (A:) Arginase {Bacillus caldovelox [TaxId: 33931]} Back     information, alignment and structure
>d2aeba1 c.42.1.1 (A:5-313) Arginase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1pq3a_ c.42.1.1 (A:) Arginase {Human (Homo sapiens), isoform II, mitochondrial [TaxId: 9606]} Back     information, alignment and structure