Citrus Sinensis ID: 022731

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290---
MSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGAVAKKILKQFAGTEILAYVSQAHNVVLPEDVVDHEMLTLDQVESNIVRCPDPEYAEKMIAAIDAVRVRGDSVGGVVTCIVRNCPRGLGSPVFDKLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFGNIRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTREKKETELIARGRHDPCVVPRAVPMVEAMVALVLMDQLMAQHAQCHLFPINPDLQGTMKLPELEPAPANFQM
cccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEcccEEccccccccccccHHHHHccccccccHHHHHHHHHHHHHHHHcccccccEEEEEEEEccccccccccccccHHHHHHHcccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccccccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccc
cccccccccccHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEcccEEccccccccccccHHHHHccccccccHHHHHHHHHHHHHHHHccccEEEEEEEEEEccccccccccHcHHHHHHHHHHHcccccccEEEcccccEEEEccccccccccccccccEEEEEcccccEEcccccccEEEEEEEEcccccEcccccEEcccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccc
msvayrpshadatydmkygvrsvqgggrssaretigrvapGAVAKKILKQFAGTEILAYVSQAhnvvlpedvvdhemltLDQVesnivrcpdpeyAEKMIAAIDAVRVRGDSVGGVVTCIVrncprglgspvFDKLEAELAKAMMslpatkgfevgsgfagtfltgsehndefytdefgnirtrtnrsggiqggisngeIINMRiafkptstigrkqntvtreKKETELIargrhdpcvvpraVPMVEAMVALVLMDQLMAQHAQchlfpinpdlqgtmklpelepapanfqm
msvayrpshadatydmkygvrSVQGGGRSSARETIGRVAPGAVAKKILKQFAGTEILAYVSQAHNVVLPEDVVDHEMLTLDQVESNIVRCPDPEYAEKMIAAIDAVRVRGDSVGGVVTCIVrncprglgspVFDKLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFgnirtrtnrsggiqggisngeiINMRIafkptstigrkqntvtrekketeliargrhdpcvvPRAVPMVEAMVALVLMDQLMAQHAQCHLFPINPDLQGTMKLPELEPAPANFQM
MSVAYRPSHADATYDMKYgvrsvqgggrssARETIGRVAPGAVAKKILKQFAGTEILAYVSQAHNVVLPEDVVDHEMLTLDQVESNIVRCPDPEYAEKMIAAIDAvrvrgdsvggvvTCIVRNCPRGLGSPVFDKLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFGNIRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTREKKETELIARGRHDPCVVPRAVPMVEAMVALVLMDQLMAQHAQCHLFPINPDLQGTMKLPELEPAPANFQM
**********************************IGRVAPGAVAKKILKQFAGTEILAYVSQAHNVVLPEDVVDHEMLTLDQVESNIVRCPDPEYAEKMIAAIDAVRVRGDSVGGVVTCIVRNCPRGLGSPVFDKLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFGNIRTRTNRSGGIQGGISNGEIINMRIAFKPTST****************LIARGRHDPCVVPRAVPMVEAMVALVLMDQLMAQHAQCHLFPINPD*******************
MSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGAVAKKILKQFAGTEILAYVSQAHNVVLPEDVVDHEMLTLDQVESNIVRCPDPEYAEKMIAAIDAVRVRGDSVGGVVTCIVRNCPRGLGSPVFDKLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFGNIRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTREKKETELIARGRHDPCVVPRAVPMVEAMVALVLMDQLMAQHAQCHLFPINPD*******************
********HADATYDMKYGVR**********RETIGRVAPGAVAKKILKQFAGTEILAYVSQAHNVVLPEDVVDHEMLTLDQVESNIVRCPDPEYAEKMIAAIDAVRVRGDSVGGVVTCIVRNCPRGLGSPVFDKLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFGNIRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTREKKETELIARGRHDPCVVPRAVPMVEAMVALVLMDQLMAQHAQCHLFPINPDLQGTMKLPELEPAPANFQM
**VAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGAVAKKILKQFAGTEILAYVSQAHNVVLPEDVVDHEMLTLDQVESNIVRCPDPEYAEKMIAAIDAVRVRGDSVGGVVTCIVRNCPRGLGSPVFDKLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFGNIRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTREKKETELIARGRHDPCVVPRAVPMVEAMVALVLMDQLMAQHAQCHLFPINPDL******************
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGAVAKKILKQFAGTEILAYVSQAHNVVLPEDVVDHEMLTLDQVESNIVRCPDPEYAEKMIAAIDAVRVRGDSVGGVVTCIVRNCPRGLGSPVFDKLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFGNIRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTREKKETELIARGRHDPCVVPRAVPMVEAMVALVLMDQLMAQHAQCHLFPINPDLQGTMKLPELEPAPANFQM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query293 2.2.26 [Sep-21-2011]
P57720436 Chorismate synthase, chlo yes no 0.986 0.662 0.868 1e-148
Q42884440 Chorismate synthase 1, ch N/A no 0.941 0.627 0.865 1e-142
P27793447 Chorismate synthase, chlo N/A no 0.941 0.617 0.876 1e-142
Q42885431 Chorismate synthase 2, ch N/A no 0.941 0.640 0.851 1e-138
Q110N5370 Chorismate synthase OS=Tr yes no 0.907 0.718 0.691 1e-108
B7KIU0362 Chorismate synthase OS=Cy yes no 0.897 0.726 0.699 1e-107
B7JVZ9362 Chorismate synthase OS=Cy yes no 0.907 0.734 0.706 1e-107
Q8DLM1363 Chorismate synthase OS=Th yes no 0.904 0.730 0.697 1e-107
P23353362 Chorismate synthase OS=Sy N/A no 0.907 0.734 0.702 1e-107
B8HNK4362 Chorismate synthase OS=Cy yes no 0.904 0.732 0.695 1e-105
>sp|P57720|AROC_ARATH Chorismate synthase, chloroplastic OS=Arabidopsis thaliana GN=EMB1144 PE=2 SV=2 Back     alignment and function desciption
 Score =  523 bits (1348), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 251/289 (86%), Positives = 273/289 (94%)

Query: 1   MSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGAVAKKILKQFAGTEILAYV 60
           MSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGA+AKKILKQFAGTEILAYV
Sbjct: 147 MSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGALAKKILKQFAGTEILAYV 206

Query: 61  SQAHNVVLPEDVVDHEMLTLDQVESNIVRCPDPEYAEKMIAAIDAVRVRGDSVGGVVTCI 120
           SQ H+VVLPE++VDHE LTL+Q+E+NIVRCP+PEYAEKMIAAIDAVR +G+SVGGVVTCI
Sbjct: 207 SQVHHVVLPEELVDHENLTLEQIENNIVRCPNPEYAEKMIAAIDAVRTKGNSVGGVVTCI 266

Query: 121 VRNCPRGLGSPVFDKLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFGN 180
           VRN PRGLG+PVFDKLEAELAKA MSLPATKGFE GSGFAGTFLTG EHNDEFYTDE G 
Sbjct: 267 VRNAPRGLGTPVFDKLEAELAKACMSLPATKGFEFGSGFAGTFLTGLEHNDEFYTDENGR 326

Query: 181 IRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTREKKETELIARGRHDPCVV 240
           IRTRTNRSGGIQGGISNGEIINMR+AFKPTSTIGRKQNTVTR+K ETE+IARGRHDPCVV
Sbjct: 327 IRTRTNRSGGIQGGISNGEIINMRVAFKPTSTIGRKQNTVTRDKVETEMIARGRHDPCVV 386

Query: 241 PRAVPMVEAMVALVLMDQLMAQHAQCHLFPINPDLQGTMKLPELEPAPA 289
           PRAVPMVEAMVALVL+DQLMAQ+AQCHLFPINP+LQ  +++ + + A A
Sbjct: 387 PRAVPMVEAMVALVLVDQLMAQYAQCHLFPINPELQEPLQIEQPQNATA 435
Catalyzes the last common step of the biosynthesis of aromatic amino acids, produced via the shikimic acid pathway.
Arabidopsis thaliana (taxid: 3702)
EC: 4EC: .EC: 2EC: .EC: 3EC: .EC: 5
>sp|Q42884|AROC1_SOLLC Chorismate synthase 1, chloroplastic OS=Solanum lycopersicum GN=CS1 PE=2 SV=1 Back     alignment and function description
>sp|P27793|AROC_CORSE Chorismate synthase, chloroplastic OS=Corydalis sempervirens PE=1 SV=1 Back     alignment and function description
>sp|Q42885|AROC2_SOLLC Chorismate synthase 2, chloroplastic OS=Solanum lycopersicum GN=CS2 PE=2 SV=1 Back     alignment and function description
>sp|Q110N5|AROC_TRIEI Chorismate synthase OS=Trichodesmium erythraeum (strain IMS101) GN=aroC PE=3 SV=1 Back     alignment and function description
>sp|B7KIU0|AROC_CYAP7 Chorismate synthase OS=Cyanothece sp. (strain PCC 7424) GN=aroC PE=3 SV=1 Back     alignment and function description
>sp|B7JVZ9|AROC_CYAP8 Chorismate synthase OS=Cyanothece sp. (strain PCC 8801) GN=aroC PE=3 SV=1 Back     alignment and function description
>sp|Q8DLM1|AROC_THEEB Chorismate synthase OS=Thermosynechococcus elongatus (strain BP-1) GN=aroC PE=3 SV=1 Back     alignment and function description
>sp|P23353|AROC_SYNY3 Chorismate synthase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=aroC PE=3 SV=2 Back     alignment and function description
>sp|B8HNK4|AROC_CYAP4 Chorismate synthase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=aroC PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query293
224100795 438 chorismate synthase [Populus trichocarpa 0.989 0.662 0.875 1e-147
356576217 435 PREDICTED: chorismate synthase, chloropl 0.982 0.662 0.871 1e-146
18402389 436 chorismate synthase [Arabidopsis thalian 0.986 0.662 0.868 1e-146
297852508 435 EMB1144 [Arabidopsis lyrata subsp. lyrat 0.986 0.664 0.868 1e-146
255577383 435 Chorismate synthase, chloroplast precurs 0.972 0.655 0.880 1e-146
12321114 435 chorismate synthase, putative [Arabidops 0.986 0.664 0.868 1e-146
224109756 437 chorismate synthase [Populus trichocarpa 0.989 0.663 0.872 1e-146
76782200 434 putative chorismate synthase [Fagus sylv 0.993 0.670 0.859 1e-144
351726190 436 chorismate synthase [Glycine max] gi|775 0.982 0.660 0.851 1e-142
225449068 436 PREDICTED: chorismate synthase, chloropl 0.969 0.651 0.863 1e-141
>gi|224100795|ref|XP_002312018.1| chorismate synthase [Populus trichocarpa] gi|222851838|gb|EEE89385.1| chorismate synthase [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  525 bits (1353), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 254/290 (87%), Positives = 270/290 (93%)

Query: 1   MSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGAVAKKILKQFAGTEILAYV 60
           MSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVA GAVAKKILK +AGTEILAYV
Sbjct: 148 MSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAAGAVAKKILKLYAGTEILAYV 207

Query: 61  SQAHNVVLPEDVVDHEMLTLDQVESNIVRCPDPEYAEKMIAAIDAVRVRGDSVGGVVTCI 120
           SQ H VVLPE VV+H+ L+LDQ+ESNIVRCPDPEYAEKMIAAIDAVRV+GDSVGGVVTCI
Sbjct: 208 SQVHKVVLPEGVVNHDSLSLDQIESNIVRCPDPEYAEKMIAAIDAVRVKGDSVGGVVTCI 267

Query: 121 VRNCPRGLGSPVFDKLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFGN 180
           VRN PRGLGSPVFDKLEAELAKA MSLPATKGFE GSGF+GTFL+GSEHNDEFYTDE G 
Sbjct: 268 VRNAPRGLGSPVFDKLEAELAKAAMSLPATKGFEFGSGFSGTFLSGSEHNDEFYTDEHGR 327

Query: 181 IRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTREKKETELIARGRHDPCVV 240
           IRTRTNRSGGIQGGISNGEIIN+RIAFKPTSTIGRKQ+TVTR+KKE ELIARGRHDPCVV
Sbjct: 328 IRTRTNRSGGIQGGISNGEIINLRIAFKPTSTIGRKQHTVTRDKKEIELIARGRHDPCVV 387

Query: 241 PRAVPMVEAMVALVLMDQLMAQHAQCHLFPINPDLQGTMKLPELEPAPAN 290
           PRAVPMVEAMVALVLMDQLMAQ +Q +LFPINPDLQ  + +P LE A A+
Sbjct: 388 PRAVPMVEAMVALVLMDQLMAQFSQSYLFPINPDLQEPLTMPRLEAANAS 437

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356576217|ref|XP_003556230.1| PREDICTED: chorismate synthase, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|18402389|ref|NP_564534.1| chorismate synthase [Arabidopsis thaliana] gi|83300489|sp|P57720.2|AROC_ARATH RecName: Full=Chorismate synthase, chloroplastic; AltName: Full=5-enolpyruvylshikimate-3-phosphate phospholyase; AltName: Full=Protein EMBRYO DEFECTIVE 1144; Flags: Precursor gi|15982824|gb|AAL09759.1| At1g48850/T24P22_3 [Arabidopsis thaliana] gi|53749180|gb|AAU90075.1| At1g48850 [Arabidopsis thaliana] gi|110742465|dbj|BAE99151.1| hypothetical protein [Arabidopsis thaliana] gi|332194235|gb|AEE32356.1| chorismate synthase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297852508|ref|XP_002894135.1| EMB1144 [Arabidopsis lyrata subsp. lyrata] gi|297339977|gb|EFH70394.1| EMB1144 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255577383|ref|XP_002529571.1| Chorismate synthase, chloroplast precursor, putative [Ricinus communis] gi|223530947|gb|EEF32805.1| Chorismate synthase, chloroplast precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|12321114|gb|AAG50662.1|AC084242_6 chorismate synthase, putative [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224109756|ref|XP_002315301.1| chorismate synthase [Populus trichocarpa] gi|118487444|gb|ABK95550.1| unknown [Populus trichocarpa] gi|222864341|gb|EEF01472.1| chorismate synthase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|76782200|gb|ABA54870.1| putative chorismate synthase [Fagus sylvatica] Back     alignment and taxonomy information
>gi|351726190|ref|NP_001237118.1| chorismate synthase [Glycine max] gi|77547031|gb|ABA90483.1| chorismate synthase [Glycine max] Back     alignment and taxonomy information
>gi|225449068|ref|XP_002275232.1| PREDICTED: chorismate synthase, chloroplastic [Vitis vinifera] gi|296086029|emb|CBI31470.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query293
TAIR|locus:2028549436 EMB1144 "embryo defective 1144 0.986 0.662 0.795 6.7e-120
CGD|CAL0002708413 ARO2 [Candida albicans (taxid: 0.887 0.629 0.522 6.7e-65
SGD|S000003116376 ARO2 "Bifunctional chorismate 0.887 0.691 0.488 4.3e-61
POMBASE|SPCC1223.14395 SPCC1223.14 "chorismate syntha 0.679 0.503 0.49 9.9e-60
UNIPROTKB|P12008361 aroC "AroC" [Escherichia coli 0.849 0.689 0.425 1.1e-46
ASPGD|ASPL0000029479410 AN5731 [Emericella nidulans (t 0.651 0.465 0.514 6.2e-46
UNIPROTKB|G4N9G9424 MGG_03281 "Chorismate synthase 0.771 0.533 0.460 5e-44
UNIPROTKB|Q9KQ85361 aroC "Chorismate synthase" [Vi 0.849 0.689 0.421 5e-44
TIGR_CMR|VC_2116361 VC_2116 "chorismate synthase" 0.849 0.689 0.421 5e-44
TIGR_CMR|CPS_3150373 CPS_3150 "chorismate synthase" 0.911 0.715 0.402 2.8e-43
TAIR|locus:2028549 EMB1144 "embryo defective 1144" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1180 (420.4 bits), Expect = 6.7e-120, P = 6.7e-120
 Identities = 230/289 (79%), Positives = 250/289 (86%)

Query:     1 MSVAYRPSHADATYDMKYXXXXXXXXXXXXARETIGRVAPGAVAKKILKQFAGTEILAYV 60
             MSVAYRPSHADATYDMKY            ARETIGRVAPGA+AKKILKQFAGTEILAYV
Sbjct:   147 MSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGALAKKILKQFAGTEILAYV 206

Query:    61 SQAHNVVLPEDVVDHEMLTLDQVESNIVRCPDPEYAEKMIAAIDAXXXXXXXXXXXXTCI 120
             SQ H+VVLPE++VDHE LTL+Q+E+NIVRCP+PEYAEKMIAAIDA            TCI
Sbjct:   207 SQVHHVVLPEELVDHENLTLEQIENNIVRCPNPEYAEKMIAAIDAVRTKGNSVGGVVTCI 266

Query:   121 VRNCPRGLGSPVFDKLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFGN 180
             VRN PRGLG+PVFDKLEAELAKA MSLPATKGFE GSGFAGTFLTG EHNDEFYTDE G 
Sbjct:   267 VRNAPRGLGTPVFDKLEAELAKACMSLPATKGFEFGSGFAGTFLTGLEHNDEFYTDENGR 326

Query:   181 IRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTREKKETELIARGRHDPCVV 240
             IRTRTNRSGGIQGGISNGEIINMR+AFKPTSTIGRKQNTVTR+K ETE+IARGRHDPCVV
Sbjct:   327 IRTRTNRSGGIQGGISNGEIINMRVAFKPTSTIGRKQNTVTRDKVETEMIARGRHDPCVV 386

Query:   241 PRAVPMVEAMVALVLMDQLMAQHAQCHLFPINPDLQGTMKLPELEPAPA 289
             PRAVPMVEAMVALVL+DQLMAQ+AQCHLFPINP+LQ  +++ + + A A
Sbjct:   387 PRAVPMVEAMVALVLVDQLMAQYAQCHLFPINPELQEPLQIEQPQNATA 435
GO:0004107 "chorismate synthase activity" evidence=IEA
GO:0009073 "aromatic amino acid family biosynthetic process" evidence=IEA;TAS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0009793 "embryo development ending in seed dormancy" evidence=NAS
GO:0005730 "nucleolus" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0006499 "N-terminal protein myristoylation" evidence=RCA
GO:0006865 "amino acid transport" evidence=RCA
GO:0009611 "response to wounding" evidence=RCA
GO:0009805 "coumarin biosynthetic process" evidence=RCA
GO:0009536 "plastid" evidence=IDA
CGD|CAL0002708 ARO2 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
SGD|S000003116 ARO2 "Bifunctional chorismate synthase and flavin reductase" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
POMBASE|SPCC1223.14 SPCC1223.14 "chorismate synthase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
UNIPROTKB|P12008 aroC "AroC" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
ASPGD|ASPL0000029479 AN5731 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4N9G9 MGG_03281 "Chorismate synthase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KQ85 aroC "Chorismate synthase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_2116 VC_2116 "chorismate synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_3150 CPS_3150 "chorismate synthase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q3AMV2AROC_SYNSC4, ., 2, ., 3, ., 50.62080.91120.7335yesno
P28777AROC_YEAST4, ., 2, ., 3, ., 50.53730.88730.6914yesno
Q31RS5AROC_SYNE74, ., 2, ., 3, ., 50.68770.90780.7348yesno
A5GIL9AROC_SYNPW4, ., 2, ., 3, ., 50.60220.90780.7348yesno
Q7U9F0AROC_SYNPX4, ., 2, ., 3, ., 50.62820.90780.7327yesno
P27793AROC_CORSE4, ., 2, ., 3, ., 50.87680.94190.6174N/Ano
Q8F9N4AROC_LEPIN4, ., 2, ., 3, ., 50.54030.93850.7236yesno
Q31CV7AROC_PROM94, ., 2, ., 3, ., 50.61270.89410.7178yesno
B7JVZ9AROC_CYAP84, ., 2, ., 3, ., 50.70630.90780.7348yesno
Q7V4Y9AROC_PROMM4, ., 2, ., 3, ., 50.58730.90780.7348yesno
Q04XD2AROC_LEPBL4, ., 2, ., 3, ., 50.52980.93850.7236yesno
Q110N5AROC_TRIEI4, ., 2, ., 3, ., 50.69140.90780.7189yesno
B2J1W7AROC_NOSP74, ., 2, ., 3, ., 50.67650.90780.7348yesno
A2BP22AROC_PROMS4, ., 2, ., 3, ., 50.62400.89410.7178yesno
Q7V364AROC_PROMP4, ., 2, ., 3, ., 50.60150.89410.7197yesno
B1ZUM3AROC_OPITP4, ., 2, ., 3, ., 50.59100.90440.7300yesno
Q42885AROC2_SOLLC4, ., 2, ., 3, ., 50.85140.94190.6403N/Ano
Q42884AROC1_SOLLC4, ., 2, ., 3, ., 50.86590.94190.6272N/Ano
Q2JLD4AROC_SYNJB4, ., 2, ., 3, ., 50.68040.89410.6931yesno
B3DXL0AROC_METI44, ., 2, ., 3, ., 50.56980.88730.7103yesno
B7KIU0AROC_CYAP74, ., 2, ., 3, ., 50.69920.89760.7265yesno
Q8YYP9AROC_NOSS14, ., 2, ., 3, ., 50.68020.90780.7348yesno
B8HNK4AROC_CYAP44, ., 2, ., 3, ., 50.69510.90440.7320yesno
A2CCA2AROC_PROM34, ., 2, ., 3, ., 50.58730.90780.7348yesno
Q04W40AROC_LEPBJ4, ., 2, ., 3, ., 50.52980.93850.7236yesno
Q3MFM3AROC_ANAVT4, ., 2, ., 3, ., 50.68020.90780.7348yesno
Q3AUR6AROC_SYNS94, ., 2, ., 3, ., 50.59850.91120.7335yesno
A0M1V5AROC_GRAFK4, ., 2, ., 3, ., 50.54610.85320.7062yesno
P46894AROC_PROMA4, ., 2, ., 3, ., 50.58360.90780.7348yesno
Q5N2I0AROC_SYNP64, ., 2, ., 3, ., 50.68770.90780.7348yesno
A8G2N2AROC_PROM24, ., 2, ., 3, ., 50.60900.89410.7178yesno
Q2JXD0AROC_SYNJA4, ., 2, ., 3, ., 50.64700.93510.7248yesno
Q72W01AROC_LEPIC4, ., 2, ., 3, ., 50.54030.93850.7236yesno
A5GW34AROC_SYNR34, ., 2, ., 3, ., 50.62780.89760.7305yesno
B1XIM6AROC_SYNP24, ., 2, ., 3, ., 50.66540.91120.7335yesno
B0C2W2AROC_ACAM14, ., 2, ., 3, ., 50.68400.90780.7307yesno
A2BUK4AROC_PROM54, ., 2, ., 3, ., 50.60150.89410.7197yesno
Q8DLM1AROC_THEEB4, ., 2, ., 3, ., 50.69770.90440.7300yesno
Q46HE7AROC_PROMT4, ., 2, ., 3, ., 50.59920.88390.7174yesno
Q6AIP3AROC_DESPS4, ., 2, ., 3, ., 50.53400.89070.7209yesno
B0JWQ2AROC_MICAN4, ., 2, ., 3, ., 50.66410.90440.7240yesno
A2C058AROC_PROM14, ., 2, ., 3, ., 50.60680.88390.7174yesno
P23353AROC_SYNY34, ., 2, ., 3, ., 50.70260.90780.7348N/Ano
Q0ID82AROC_SYNS34, ., 2, ., 3, ., 50.62080.90780.7348yesno
A9BDJ2AROC_PROM44, ., 2, ., 3, ., 50.61710.90780.7327yesno
B2UNJ5AROC_AKKM84, ., 2, ., 3, ., 50.59390.89070.7229yesno
A3PAU4AROC_PROM04, ., 2, ., 3, ., 50.61110.90780.7287yesno
B1WRV7AROC_CYAA54, ., 2, ., 3, ., 50.68770.90780.7327yesno
Q11Y57AROC_CYTH34, ., 2, ., 3, ., 50.55380.87370.7111yesno
P57720AROC_ARATH4, ., 2, ., 3, ., 50.86850.98630.6628yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.2.30.963
3rd Layer4.2.3.50.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query293
PLN02754413 PLN02754, PLN02754, chorismate synthase 0.0
cd07304344 cd07304, Chorismate_synthase, Chorismase synthase, 1e-147
pfam01264346 pfam01264, Chorismate_synt, Chorismate synthase 1e-146
PRK05382359 PRK05382, PRK05382, chorismate synthase; Validated 1e-142
COG0082369 COG0082, AroC, Chorismate synthase [Amino acid tra 1e-128
TIGR00033351 TIGR00033, aroC, chorismate synthase 1e-114
PRK12463390 PRK12463, PRK12463, chorismate synthase; Reviewed 4e-40
>gnl|CDD|215402 PLN02754, PLN02754, chorismate synthase Back     alignment and domain information 
 Score =  586 bits (1511), Expect = 0.0
 Identities = 252/287 (87%), Positives = 265/287 (92%)

Query: 1   MSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGAVAKKILKQFAGTEILAYV 60
           MSVAYRPSHADATYD KYGVR+VQGGGRSSARETIGRVA GAVAKKILKQFAGTEILAYV
Sbjct: 121 MSVAYRPSHADATYDFKYGVRAVQGGGRSSARETIGRVAAGAVAKKILKQFAGTEILAYV 180

Query: 61  SQAHNVVLPEDVVDHEMLTLDQVESNIVRCPDPEYAEKMIAAIDAVRVRGDSVGGVVTCI 120
           SQ H+VVLPED+VDHE LTL+Q+ESNIVRCPDPEYAEKMIAAIDAVRVRGDSVGGVVTCI
Sbjct: 181 SQVHDVVLPEDLVDHETLTLEQIESNIVRCPDPEYAEKMIAAIDAVRVRGDSVGGVVTCI 240

Query: 121 VRNCPRGLGSPVFDKLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDEFGN 180
           VRN PRGLGSPVFDKLEAELAKAMMSLPATKGFE+GSGFAGT LTGSEHNDEFY DE G 
Sbjct: 241 VRNVPRGLGSPVFDKLEAELAKAMMSLPATKGFEIGSGFAGTLLTGSEHNDEFYMDEHGR 300

Query: 181 IRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTREKKETELIARGRHDPCVV 240
           IRTRTNRSGGIQGGISNGEII MRIAFKPTSTIG+KQNTVTR+ +ETEL ARGRHDPCVV
Sbjct: 301 IRTRTNRSGGIQGGISNGEIIVMRIAFKPTSTIGKKQNTVTRDGQETELRARGRHDPCVV 360

Query: 241 PRAVPMVEAMVALVLMDQLMAQHAQCHLFPINPDLQGTMKLPELEPA 287
           PRAVPMVEAMVALVL+DQLMAQ+AQC LFPINP LQ  + +     A
Sbjct: 361 PRAVPMVEAMVALVLVDQLMAQYAQCELFPINPVLQEPLGIASPAAA 407

Length = 413
>gnl|CDD|143612 cd07304, Chorismate_synthase, Chorismase synthase, the enzyme catalyzing the final step of the shikimate pathway Back     alignment and domain information
>gnl|CDD|216398 pfam01264, Chorismate_synt, Chorismate synthase Back     alignment and domain information
>gnl|CDD|235438 PRK05382, PRK05382, chorismate synthase; Validated Back     alignment and domain information
>gnl|CDD|223160 COG0082, AroC, Chorismate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|232792 TIGR00033, aroC, chorismate synthase Back     alignment and domain information
>gnl|CDD|171518 PRK12463, PRK12463, chorismate synthase; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 293
COG0082369 AroC Chorismate synthase [Amino acid transport and 100.0
PLN02754413 chorismate synthase 100.0
PRK12463390 chorismate synthase; Reviewed 100.0
TIGR00033351 aroC chorismate synthase. Homotetramer (noted in E 100.0
PF01264346 Chorismate_synt: Chorismate synthase; InterPro: IP 100.0
PRK05382359 chorismate synthase; Validated 100.0
cd07304344 Chorismate_synthase Chorismase synthase, the enzym 100.0
KOG4492368 consensus Chorismate synthase [Amino acid transpor 100.0
KOG4492368 consensus Chorismate synthase [Amino acid transpor 99.64
PRK05382 359 chorismate synthase; Validated 81.91
PRK12463 390 chorismate synthase; Reviewed 81.16
cd07304 344 Chorismate_synthase Chorismase synthase, the enzym 80.68
>COG0082 AroC Chorismate synthase [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.5e-110  Score=797.93  Aligned_cols=270  Identities=51%  Similarity=0.808  Sum_probs=256.9

Q ss_pred             CCCCCCCCccccccccccCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhcCCcEEEEEeccccceecCCCCcccccccH
Q 022731            1 MSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGAVAKKILKQFAGTEILAYVSQAHNVVLPEDVVDHEMLTL   80 (293)
Q Consensus         1 ~~~~pRPGHAD~t~~~KYg~~D~rGGgRsSaReTa~rVaAGaiAk~~L~~~~gI~i~s~v~~IG~v~~~~~~~~~~~~~~   80 (293)
                      +++.||||||||||+.|||++||||||||||||||+|||||||||+||.+ +||+|.|||++||+++++..      +++
T Consensus        97 ~~~~pRPGHADyty~~KYg~rD~RgggRsSaReTa~rVAaGAvAKk~L~~-~gi~v~~~v~~iG~~~~~~~------~~~  169 (369)
T COG0082          97 IKDPPRPGHADYTYGIKYGFRDYRGGGRSSARETAARVAAGAVAKKLLRE-LGIEVLGHVVSIGGIEADDS------LDF  169 (369)
T ss_pred             cccCCCCCcccchhhhhcCccccCCcccchhHHHHHHHHHHHHHHHHHHh-CCeEEEEeeeeccCCccccc------CCH
Confidence            46889999999999999999999999999999999999999999999999 79999999999999986531      556


Q ss_pred             Hhhhc--CcCCCCCHHHHHHHHHHHHHHHHcCCccCcEEEEEEEeCCCCcCCcccCchhHHHHHHhccCCCccceeeccc
Q 022731           81 DQVES--NIVRCPDPEYAEKMIAAIDAVRVRGDSVGGVVTCIVRNCPRGLGSPVFDKLEAELAKAMMSLPATKGFEVGSG  158 (293)
Q Consensus        81 ~~~~~--~~~~~~d~~~~~~m~~~I~~ak~~gDSlGGvve~~~~gvP~GLG~p~f~kLda~La~a~mSIpAVKgvE~G~G  158 (293)
                      +++++  ||+||||+++.++|+++|+++|++|||+||+|||++.|||+|||+|+||||||+||+||||||||||||||+|
T Consensus       170 ~~~~~~~sp~~~pd~e~~~~m~~~i~~~k~~GDSiGgvvevva~gvP~GLG~pvfdkLda~lA~AlmsI~AvKGVEiG~G  249 (369)
T COG0082         170 EEVEQRASPVRCPDPEAEEEMEELIDKAKKEGDSIGGVVEVVAEGVPAGLGEPVFDKLDAKLAHALMSIPAVKGVEIGDG  249 (369)
T ss_pred             HHHhhccCCccCCCHHHHHHHHHHHHHHHhcCCCcccEEEEEEeCCCCCCCCcccccchHHHHHHhhCCccceeEEeccc
Confidence            77766  8999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCcccccceecCCCCeeeccCCCccccccccCCCceEEEEeeccCCcccccccccccC-Cceeeeeccccccc
Q 022731          159 FAGTFLTGSEHNDEFYTDEFGNIRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTRE-KKETELIARGRHDP  237 (293)
Q Consensus       159 f~~a~~~GSe~nD~~~~~~~~~i~~~tN~~GGI~GGISnG~pIv~r~a~KPtpSI~~~q~TVd~~-~~e~~~~~~gRhDp  237 (293)
                      |++++|+|||+||+|++++  ++.++|||+|||||||||||||++|++|||||||++||+|||++ +++.++.++|||||
T Consensus       250 F~~a~~~GSe~~De~~~~~--~~~~~tN~~GGilGGitnG~pIv~r~a~KPt~SI~kp~~TVd~~t~e~~~~~~kgRhDp  327 (369)
T COG0082         250 FEAARMRGSEANDEITLDG--GIVRKTNNAGGILGGITNGEPIVVRVAFKPTPSIYKPQRTVDLETGEEVEASTKGRHDP  327 (369)
T ss_pred             hhhhhcccccccCceeeCC--CeeEccccCCceeccccCCccEEEEEEeCCCCccCccccceEcccCCeeEEEecCcCCC
Confidence            9999999999999999864  89999999999999999999999999999999999999999988 58889999999999


Q ss_pred             ccccchhHHHHHHHHHHHHHHHHHHccccccccCCCCcccCC
Q 022731          238 CVVPRAVPMVEAMVALVLMDQLMAQHAQCHLFPINPDLQGTM  279 (293)
Q Consensus       238 Ci~pRa~pVvEAm~AlvLaD~~L~~~~~~~~~~~~~~~~~~~  279 (293)
                      |++|||+||+|||+||||||++|++++++....++.+...|+
T Consensus       328 cv~prAvpV~EamvA~vLaD~~L~~~~~~~~~~~~~~~~~~~  369 (369)
T COG0082         328 CVVPRAVPVVEAMVALVLADHLLRKFGQDPDVELKRRVANYR  369 (369)
T ss_pred             ccccchhHHHHHHHHHHHHHHHHHhhCCCcchhhcccchhcC
Confidence            999999999999999999999999999999888888877653

>PLN02754 chorismate synthase Back     alignment and domain information
>PRK12463 chorismate synthase; Reviewed Back     alignment and domain information
>TIGR00033 aroC chorismate synthase Back     alignment and domain information
>PF01264 Chorismate_synt: Chorismate synthase; InterPro: IPR000453 Chorismate synthase (4 Back     alignment and domain information
>PRK05382 chorismate synthase; Validated Back     alignment and domain information
>cd07304 Chorismate_synthase Chorismase synthase, the enzyme catalyzing the final step of the shikimate pathway Back     alignment and domain information
>KOG4492 consensus Chorismate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG4492 consensus Chorismate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK05382 chorismate synthase; Validated Back     alignment and domain information
>PRK12463 chorismate synthase; Reviewed Back     alignment and domain information
>cd07304 Chorismate_synthase Chorismase synthase, the enzyme catalyzing the final step of the shikimate pathway Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query293
1r52_A382 Crystal Structure Of The Bifunctional Chorismate Sy 1e-65
1um0_A365 Crystal Structure Of Chorismate Synthase Complexed 3e-31
1ztb_A401 Crystal Structure Of Chorismate Synthase From Mycob 3e-29
2o11_A407 Mycobacterium Tuberculosis Chorismate Synthase Leng 3e-29
4ecd_A398 2.5 Angstrom Resolution Crystal Structure Of Bifido 2e-26
1q1l_A401 Crystal Structure Of Chorismate Synthase Length = 4 5e-24
1sq1_A370 Crystal Structure Of The Chorismate Synthase From C 8e-24
1qxo_A388 Crystal Structure Of Chorismate Synthase Complexed 1e-14
>pdb|1R52|A Chain A, Crystal Structure Of The Bifunctional Chorismate Synthase From Saccharomyces Cerevisiae Length = 382 Back     alignment and structure 
Iteration: 1

 Score =  246 bits (628), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 131/268 (48%), Positives = 168/268 (62%), Gaps = 8/268 (2%)
Query: 6   RPSHADATYDMKYXXXXXXXXXXXXARETIGRVAPGAVAKKILKQFAGTEILAYVSQAHN 65
           RPSHAD TY  KY            ARETIGRVA GA+A+K L Q +  EI+A+V+Q   
Sbjct: 101 RPSHADFTYSEKYGIKASSGGGRASARETIGRVASGAIAEKFLAQNSNVEIVAFVTQIGE 160
Query: 66  VVLPEDVVDHEM------LTLDQVES-NIVRCPDPEYAEKMIAAIDAXXXXXXXXXXXXT 118
           + +  D  D E       +T ++V+S   +RCPD   A  M+  I+             T
Sbjct: 161 IKMNRDSFDPEFQHLLNTITREKVDSMGPIRCPDASVAGLMVKEIEKYRGNKDSIGGVVT 220
Query: 119 CIVRNCPRGLGSPVFDKLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTD-E 177
           C+VRN P GLG P FDKLEA LA AM+S+PA+KGFE+GSGF G  + GS+HND FY + E
Sbjct: 221 CVVRNLPTGLGEPCFDKLEAMLAHAMLSIPASKGFEIGSGFQGVSVPGSKHNDPFYFEKE 280
Query: 178 FGNIRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTREKKETELIARGRHDP 237
              +RT+TN SGG+QGGISNGE I   + FK  +TI ++Q T T + +E  L A+GRHDP
Sbjct: 281 TNRLRTKTNNSGGVQGGISNGENIYFSVPFKSVATISQEQKTATYDGEEGILAAKGRHDP 340
Query: 238 CVVPRAVPMVEAMVALVLMDQLMAQHAQ 265
            V PRA+P+VEAM ALVL D L+ Q A+
Sbjct: 341 AVTPRAIPIVEAMTALVLADALLIQKAR 368
>pdb|1UM0|A Chain A, Crystal Structure Of Chorismate Synthase Complexed With Fmn Length = 365 Back     alignment and structure
>pdb|1ZTB|A Chain A, Crystal Structure Of Chorismate Synthase From Mycobacterium Tuberculosis Length = 401 Back     alignment and structure
>pdb|2O11|A Chain A, Mycobacterium Tuberculosis Chorismate Synthase Length = 407 Back     alignment and structure
>pdb|4ECD|A Chain A, 2.5 Angstrom Resolution Crystal Structure Of Bifidobacterium Longum Chorismate Synthase Length = 398 Back     alignment and structure
>pdb|1Q1L|A Chain A, Crystal Structure Of Chorismate Synthase Length = 401 Back     alignment and structure
>pdb|1SQ1|A Chain A, Crystal Structure Of The Chorismate Synthase From Campylobacter Jejuni, Northeast Structural Genomics Target Br19 Length = 370 Back     alignment and structure
>pdb|1QXO|A Chain A, Crystal Structure Of Chorismate Synthase Complexed With Oxidized Fmn And Epsp Length = 388 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query293
1r53_A382 Chorismate synthase; two layers alpha-beta, lyase; 1e-168
1sq1_A370 Chorismate synthase; structural genomics, bifuncti 1e-164
1um0_A365 Chorismate synthase; beta-alpha-beta sandwich fold 1e-156
4ecd_A398 Chorismate synthase; 4-layer sandwich, lyase; 2.50 1e-151
2o11_A407 Chorismate synthase; shikimate pathway, LYA; 1.65A 1e-148
1q1l_A401 Chorismate synthase; beta alpha beta sandwich, str 1e-144
1qxo_A388 Chorismate synthase; beta-alpha-beta, flavoprotein 1e-143
>1r53_A Chorismate synthase; two layers alpha-beta, lyase; 2.20A {Saccharomyces cerevisiae} SCOP: d.258.1.1 PDB: 1r52_A Length = 382 Back     alignment and structure
 Score =  470 bits (1211), Expect = e-168
 Identities = 143/274 (52%), Positives = 181/274 (66%), Gaps = 8/274 (2%)

Query: 1   MSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGAVAKKILKQFAGTEILAYV 60
           M    RPSHAD TY  KYG+++  GGGR+SARETIGRVA GA+A+K L Q +  EI+A+V
Sbjct: 96  MDKFPRPSHADFTYSEKYGIKASSGGGRASARETIGRVASGAIAEKFLAQNSNVEIVAFV 155

Query: 61  SQAHNVVLPEDVVDHEMLTLDQ-------VESNIVRCPDPEYAEKMIAAIDAVRVRGDSV 113
           +Q   + +  D  D E   L              +RCPD   A  M+  I+  R   DS+
Sbjct: 156 TQIGEIKMNRDSFDPEFQHLLNTITREKVDSMGPIRCPDASVAGLMVKEIEKYRGNKDSI 215

Query: 114 GGVVTCIVRNCPRGLGSPVFDKLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEF 173
           GGVVTC+VRN P GLG P FDKLEA LA AM+S+PA+KGFE+GSGF G  + GS+HND F
Sbjct: 216 GGVVTCVVRNLPTGLGEPCFDKLEAMLAHAMLSIPASKGFEIGSGFQGVSVPGSKHNDPF 275

Query: 174 YTD-EFGNIRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTREKKETELIAR 232
           Y + E   +RT+TN SGG+QGGISNGE I   + FK  +TI ++Q T T + +E  L A+
Sbjct: 276 YFEKETNRLRTKTNNSGGVQGGISNGENIYFSVPFKSVATISQEQKTATYDGEEGILAAK 335

Query: 233 GRHDPCVVPRAVPMVEAMVALVLMDQLMAQHAQC 266
           GRHDP V PRA+P+VEAM ALVL D L+ Q A+ 
Sbjct: 336 GRHDPAVTPRAIPIVEAMTALVLADALLIQKARD 369
>1sq1_A Chorismate synthase; structural genomics, bifunctional alpha/beta tetrameric PROT protein structure initiative; 2.80A {Campylobacter jejuni} SCOP: d.258.1.1 Length = 370 Back     alignment and structure
>1um0_A Chorismate synthase; beta-alpha-beta sandwich fold, lyase; HET: FMN; 1.95A {Helicobacter pylori} SCOP: d.258.1.1 PDB: 1umf_A Length = 365 Back     alignment and structure
>4ecd_A Chorismate synthase; 4-layer sandwich, lyase; 2.50A {Bifidobacterium longum subsp} Length = 398 Back     alignment and structure
>2o11_A Chorismate synthase; shikimate pathway, LYA; 1.65A {Mycobacterium tuberculosis} PDB: 2o12_A* 2qhf_A 2g85_A 1ztb_A Length = 407 Back     alignment and structure
>1q1l_A Chorismate synthase; beta alpha beta sandwich, structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 2.05A {Aquifex aeolicus} SCOP: d.258.1.1 Length = 401 Back     alignment and structure
>1qxo_A Chorismate synthase; beta-alpha-beta, flavoprotein, shikimate, anti-infective, lyase; HET: FMN EPS; 2.00A {Streptococcus pneumoniae} SCOP: d.258.1.1 Length = 388 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query293
4ecd_A398 Chorismate synthase; 4-layer sandwich, lyase; 2.50 100.0
1qxo_A388 Chorismate synthase; beta-alpha-beta, flavoprotein 100.0
2o11_A407 Chorismate synthase; shikimate pathway, LYA; 1.65A 100.0
1q1l_A401 Chorismate synthase; beta alpha beta sandwich, str 100.0
1r53_A382 Chorismate synthase; two layers alpha-beta, lyase; 100.0
1sq1_A370 Chorismate synthase; structural genomics, bifuncti 100.0
1um0_A365 Chorismate synthase; beta-alpha-beta sandwich fold 100.0
2k1h_A94 Uncharacterized protein Ser13; structural genomics 88.12
1pqx_A91 Conserved hypothetical protein; ZR18,structure, au 81.32
>4ecd_A Chorismate synthase; 4-layer sandwich, lyase; 2.50A {Bifidobacterium longum subsp} Back     alignment and structure
Probab=100.00  E-value=1.8e-113  Score=828.80  Aligned_cols=284  Identities=33%  Similarity=0.441  Sum_probs=188.5

Q ss_pred             CCCCCCCccccccccccCCCCCCCC-chhhHHHHHHHHHHHHHHHHHHhhcCCcEEEEEeccccceecCCCCcccccccH
Q 022731            2 SVAYRPSHADATYDMKYGVRSVQGG-GRSSARETIGRVAPGAVAKKILKQFAGTEILAYVSQAHNVVLPEDVVDHEMLTL   80 (293)
Q Consensus         2 ~~~pRPGHAD~t~~~KYg~~D~rGG-gRsSaReTa~rVaAGaiAk~~L~~~~gI~i~s~v~~IG~v~~~~~~~~~~~~~~   80 (293)
                      ++.||||||||||++|||++||||| |||||||||+||||||||||||++.+||+|.|||++||+|+++....+....++
T Consensus       110 ~~~pRPGHAD~t~~~KYG~~D~RgglgRsSaRETa~RVAaGAiAk~~L~~~~GI~i~s~v~~iG~i~~~~~~~~~~~~~~  189 (398)
T 4ecd_A          110 LSRPRPGHADLTGMRKYGFDDARPVLERSSARETASRVALGEVAKQFLDQAFGIRTVAHVVALGGVQTNPDLPLPTPDDL  189 (398)
T ss_dssp             -------------------------------CCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEETTEECCSSSCCCCGGGH
T ss_pred             cCCCCCCccchhhhhhcCCccccCccccchHHHHHHHHHHHHHHHHHHhhcCCeEEEEEEEEEcCEEcccccCCCCHHHH
Confidence            4679999999999999999999999 999999999999999999999987459999999999999997532112345667


Q ss_pred             HhhhcCcCCCCCHHHHHHHHHHHHHHHHcCCccCcEEEEEEEeCCCCcCCccc--CchhHHHHHHhccCCCccceeeccc
Q 022731           81 DQVESNIVRCPDPEYAEKMIAAIDAVRVRGDSVGGVVTCIVRNCPRGLGSPVF--DKLEAELAKAMMSLPATKGFEVGSG  158 (293)
Q Consensus        81 ~~~~~~~~~~~d~~~~~~m~~~I~~ak~~gDSlGGvve~~~~gvP~GLG~p~f--~kLda~La~a~mSIpAVKgvE~G~G  158 (293)
                      +++++|+|||||++++++|+++|+++|++|||+||+|||+++|||+|||||+|  ||||++||+||||||||||||||+|
T Consensus       190 ~~~~~~~~rc~d~~~~~~m~~~I~~ak~~gDS~GGvve~v~~gvP~GLG~pvf~d~kLda~LA~A~mSI~AvKGvEiG~G  269 (398)
T 4ecd_A          190 EALDASPVRTLDKEAEVRIIERINEAKKAADTLGGVIEVLAYGVPAGIGTYVESDRRLDAALASAIMGIQAFKGVEIGDG  269 (398)
T ss_dssp             HHHHHSTTSCSCHHHHHHHHHHHHTC--CGGGCCEEEEEEEESCCSCCBCSSSSTTSHHHHHHHHHHTSTTEEEEEETTT
T ss_pred             HHHhcCCCCCCCHHHHHHHHHHHHHHHHhCCCCceEEEEEEEcCCCCCCCCcccccChhHHHHHHhcCcCceeeEEecch
Confidence            88999999999999999999999999999999999999999999999999999  9999999999999999999999999


Q ss_pred             ccccccCCCcccccceecCCCCeeeccCCCccccccccCCCceEEEEeeccCCcccccccccccCCceeeeecccccccc
Q 022731          159 FAGTFLTGSEHNDEFYTDEFGNIRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTREKKETELIARGRHDPC  238 (293)
Q Consensus       159 f~~a~~~GSe~nD~~~~~~~~~i~~~tN~~GGI~GGISnG~pIv~r~a~KPtpSI~~~q~TVd~~~~e~~~~~~gRhDpC  238 (293)
                      |++++++|||+||+|+++++|.++++|||+|||+|||||||||+||++|||||||.+||+|||+++++.+...+||||||
T Consensus       270 F~~a~~~GSe~nD~~~~~~~g~~~~~TN~aGGI~GGISnG~pIv~r~a~KPt~SI~~~q~TVd~~~~e~~~~~~gRhDpC  349 (398)
T 4ecd_A          270 FLAASRPGSQAHDEIVVNADGRIDRLSNRAGGIEGGMSNGQVIRVRGAMKPIPSIPKALRTVDVLTGESAQAINQRSDST  349 (398)
T ss_dssp             TTC-------------------------CCCSEETTEECSSCEEEEEEECC-------------------------CCBC
T ss_pred             HhhhhccccccccceeecCCCceeecccCCcCccccccCCCcEEEEEEecCcccccccccceecCCCCeeeccCCCCCcc
Confidence            99999999999999987644459999999999999999999999999999999999999999999988888889999999


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHccccccccCCCCcccCCCCCCCC
Q 022731          239 VVPRAVPMVEAMVALVLMDQLMAQHAQCHLFPINPDLQGTMKLPELE  285 (293)
Q Consensus       239 i~pRa~pVvEAm~AlvLaD~~L~~~~~~~~~~~~~~~~~~~~~~~~~  285 (293)
                      ++|||+||+|||+||||||++|++++++++.++++++++|++.++.+
T Consensus       350 vvprA~pV~EAm~AlvLad~~L~~~g~d~~~e~~~~~~~y~~~~~~~  396 (398)
T 4ecd_A          350 AVPAASVVAEAMVRLTLAKYALDKFGGDSVAETRRNLESYLASWPEH  396 (398)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHCCSBHHHHHHHHHHHTTC----
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999988764
>1qxo_A Chorismate synthase; beta-alpha-beta, flavoprotein, shikimate, anti-infective, lyase; HET: FMN EPS; 2.00A {Streptococcus pneumoniae} SCOP: d.258.1.1 Back     alignment and structure
>2o11_A Chorismate synthase; shikimate pathway, LYA; 1.65A {Mycobacterium tuberculosis} PDB: 2o12_A* 2qhf_A 2g85_A 1ztb_A Back     alignment and structure
>1q1l_A Chorismate synthase; beta alpha beta sandwich, structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 2.05A {Aquifex aeolicus} SCOP: d.258.1.1 Back     alignment and structure
>1r53_A Chorismate synthase; two layers alpha-beta, lyase; 2.20A {Saccharomyces cerevisiae} SCOP: d.258.1.1 PDB: 1r52_A Back     alignment and structure
>1sq1_A Chorismate synthase; structural genomics, bifunctional alpha/beta tetrameric PROT protein structure initiative; 2.80A {Campylobacter jejuni} SCOP: d.258.1.1 Back     alignment and structure
>1um0_A Chorismate synthase; beta-alpha-beta sandwich fold, lyase; HET: FMN; 1.95A {Helicobacter pylori} SCOP: d.258.1.1 PDB: 1umf_A Back     alignment and structure
>2k1h_A Uncharacterized protein Ser13; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Staphylococcus epidermidis} Back     alignment and structure
>1pqx_A Conserved hypothetical protein; ZR18,structure, autostructure,spins,autoassign, northeast structural genomics consortium; NMR {Staphylococcus aureus subsp} SCOP: d.267.1.1 PDB: 2ffm_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 293
d1r53a_371 d.258.1.1 (A:) Chorismate synthase, AroC {Baker's 2e-92
d1q1la_397 d.258.1.1 (A:) Chorismate synthase, AroC {Aquifex 3e-85
d1qxoa_388 d.258.1.1 (A:) Chorismate synthase, AroC {Streptoc 4e-84
d1sq1a_360 d.258.1.1 (A:) Chorismate synthase, AroC {Campylob 2e-82
d1um0a_365 d.258.1.1 (A:) Chorismate synthase, AroC {Helicoba 5e-80
>d1r53a_ d.258.1.1 (A:) Chorismate synthase, AroC {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 371 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Chorismate synthase, AroC
superfamily: Chorismate synthase, AroC
family: Chorismate synthase, AroC
domain: Chorismate synthase, AroC
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  276 bits (707), Expect = 2e-92
 Identities = 143/270 (52%), Positives = 186/270 (68%), Gaps = 8/270 (2%)

Query: 5   YRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGAVAKKILKQFAGTEILAYVSQAH 64
            RPSHAD TY  KYG+++  GGGR+SARETIGRVA GA+A+K L Q +  EI+A+V+Q  
Sbjct: 100 PRPSHADFTYSEKYGIKASSGGGRASARETIGRVASGAIAEKFLAQNSNVEIVAFVTQIG 159

Query: 65  NVVLPEDVVDHEM------LTLDQVES-NIVRCPDPEYAEKMIAAIDAVRVRGDSVGGVV 117
            + +  D  D E       +T ++V+S   +RCPD   A  M+  I+  R   DS+GGVV
Sbjct: 160 EIKMNRDSFDPEFQHLLNTITREKVDSMGPIRCPDASVAGLMVKEIEKYRGNKDSIGGVV 219

Query: 118 TCIVRNCPRGLGSPVFDKLEAELAKAMMSLPATKGFEVGSGFAGTFLTGSEHNDEFYTDE 177
           TC+VRN P GLG P FDKLEA LA AM+S+PA+KGFE+GSGF G  + GS+HND FY ++
Sbjct: 220 TCVVRNLPTGLGEPCFDKLEAMLAHAMLSIPASKGFEIGSGFQGVSVPGSKHNDPFYFEK 279

Query: 178 F-GNIRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTREKKETELIARGRHD 236
               +RT+TN SGG+QGGISNGE I   + FK  +TI ++Q T T + +E  L A+GRHD
Sbjct: 280 ETNRLRTKTNNSGGVQGGISNGENIYFSVPFKSVATISQEQKTATYDGEEGILAAKGRHD 339

Query: 237 PCVVPRAVPMVEAMVALVLMDQLMAQHAQC 266
           P V PRA+P+VEAM ALVL D L+ Q A+ 
Sbjct: 340 PAVTPRAIPIVEAMTALVLADALLIQKARD 369
>d1q1la_ d.258.1.1 (A:) Chorismate synthase, AroC {Aquifex aeolicus [TaxId: 63363]} Length = 397 Back     information, alignment and structure
>d1qxoa_ d.258.1.1 (A:) Chorismate synthase, AroC {Streptococcus pneumoniae [TaxId: 1313]} Length = 388 Back     information, alignment and structure
>d1sq1a_ d.258.1.1 (A:) Chorismate synthase, AroC {Campylobacter jejuni [TaxId: 197]} Length = 360 Back     information, alignment and structure
>d1um0a_ d.258.1.1 (A:) Chorismate synthase, AroC {Helicobacter pylori [TaxId: 210]} Length = 365 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query293
d1qxoa_388 Chorismate synthase, AroC {Streptococcus pneumonia 100.0
d1q1la_397 Chorismate synthase, AroC {Aquifex aeolicus [TaxId 100.0
d1sq1a_360 Chorismate synthase, AroC {Campylobacter jejuni [T 100.0
d1r53a_371 Chorismate synthase, AroC {Baker's yeast (Saccharo 100.0
d1um0a_365 Chorismate synthase, AroC {Helicobacter pylori [Ta 100.0
d1q1la_ 397 Chorismate synthase, AroC {Aquifex aeolicus [TaxId 87.9
d1um0a_ 365 Chorismate synthase, AroC {Helicobacter pylori [Ta 87.53
d1r53a_ 371 Chorismate synthase, AroC {Baker's yeast (Saccharo 86.12
d1sq1a_ 360 Chorismate synthase, AroC {Campylobacter jejuni [T 84.93
>d1qxoa_ d.258.1.1 (A:) Chorismate synthase, AroC {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Chorismate synthase, AroC
superfamily: Chorismate synthase, AroC
family: Chorismate synthase, AroC
domain: Chorismate synthase, AroC
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=100.00  E-value=1e-109  Score=801.38  Aligned_cols=281  Identities=32%  Similarity=0.408  Sum_probs=263.1

Q ss_pred             CCCCCccccccccccCCCCCCCC-chhhHHHHHHHHHHHHHHHHHHhhcCCcEEEEEeccccceecCCCCcccccccHHh
Q 022731            4 AYRPSHADATYDMKYGVRSVQGG-GRSSARETIGRVAPGAVAKKILKQFAGTEILAYVSQAHNVVLPEDVVDHEMLTLDQ   82 (293)
Q Consensus         4 ~pRPGHAD~t~~~KYg~~D~rGG-gRsSaReTa~rVaAGaiAk~~L~~~~gI~i~s~v~~IG~v~~~~~~~~~~~~~~~~   82 (293)
                      .||||||||+|++|||++|+|+| |||||||||+||||||||||||++ +||+|.|||++||+++++...........++
T Consensus       105 ~PRPGHAD~~~~~Kyg~~d~r~gggRsSaReTa~rVAaGaiAk~~L~~-~gI~v~s~v~~IG~i~~~~~~~~~~~~~~~~  183 (388)
T d1qxoa_         105 HPRPGHADLVGGIKYRFDDLRNSLERSSARETTMRVAVGAVAKRLLAE-LDMEIANHVVVFGGKEIDVPENLTVAEIKQR  183 (388)
T ss_dssp             SCCTTSSHHHHHHHHTCSSTHHHHHHHSGGGHHHHHHHHHHHHHHHHH-TTCEEEEEEEEETTEECCCCSSCCHHHHHHH
T ss_pred             cCCCCchhHHHHHHhCCccccCCCcchHHHHHHHHHHHHHHHHHHHHH-hCCeeeeeeEEecceeccCccccCHHHHHhh
Confidence            58999999999999999988877 999999999999999999999998 7999999999999998753211111122456


Q ss_pred             hhcCcCCCCCHHHHHHHHHHHHHHHHcCCccCcEEEEEEEeCCCCcCCccc--CchhHHHHHHhccCCCccceeeccccc
Q 022731           83 VESNIVRCPDPEYAEKMIAAIDAVRVRGDSVGGVVTCIVRNCPRGLGSPVF--DKLEAELAKAMMSLPATKGFEVGSGFA  160 (293)
Q Consensus        83 ~~~~~~~~~d~~~~~~m~~~I~~ak~~gDSlGGvve~~~~gvP~GLG~p~f--~kLda~La~a~mSIpAVKgvE~G~Gf~  160 (293)
                      +++++++|||++++++|+++|+++|++||||||+|||+|+|||+|||+|+|  +|||++||+||||||||||||||+||+
T Consensus       184 ~~~~~~~c~d~~~~~~m~~~I~~ar~~gDSlGG~ve~~~~gvP~GLG~pv~~d~kLda~La~AlmSIpAvKgvEfG~GF~  263 (388)
T d1qxoa_         184 AAQSEVSIVNQEREQEIKDYIDQIKRDGDTIGGVVETVVGGVPVGLGSYVQWDRKLDARLAQAVVSINAFKGVEFGLGFE  263 (388)
T ss_dssp             HHTSTTCCSCGGGHHHHHHHHHHHHHTTCCBCEEEEEEEESCCTTCSCSSSGGGCHHHHHHHHHHTSTTEEEEEETTGGG
T ss_pred             hhccccccCChHHhhhhHHHHHHHHhcCCCcCceEEEEEEeCCccccCCccCCccccHHHHHHHhcccceeeeeccccHH
Confidence            788999999999999999999999999999999999999999999999986  899999999999999999999999999


Q ss_pred             ccccCCCcccccceecCCCCeeeccCCCccccccccCCCceEEEEeeccCCcccccccccccCCceeeeecccccccccc
Q 022731          161 GTFLTGSEHNDEFYTDEFGNIRTRTNRSGGIQGGISNGEIINMRIAFKPTSTIGRKQNTVTREKKETELIARGRHDPCVV  240 (293)
Q Consensus       161 ~a~~~GSe~nD~~~~~~~~~i~~~tN~~GGI~GGISnG~pIv~r~a~KPtpSI~~~q~TVd~~~~e~~~~~~gRhDpCi~  240 (293)
                      +++|+|||+||+|++++++++.++|||+|||+|||||||||+||++|||||||.+||+|||+.++|.++.++||||||++
T Consensus       264 ~a~~~GSe~nD~~~~~~~~~~~~~tN~~GGi~GGISnG~pI~~rva~KPtsSI~~~q~Tvd~~~~e~~~~~~gRhDpCiv  343 (388)
T d1qxoa_         264 AGYRKGSQVMDEILWSKEDGYTRRTNNLGGFEGGMTNGQPIVVRGVMKPIPTLYKPLMSVDIETHEPYKATVERSDPTAL  343 (388)
T ss_dssp             GGGSBGGGTSCCEEEETTTEEEESCCTTTTEETTEECSSCEEEEEEECCCSCCSSCEEEECTTTCCEEEECCSSCCSCCH
T ss_pred             HHHhhccccccchhccccCCcccccCCCcccccCCCCCCCeEEEEEeCCccccCCcccceecCCCeeEeccCCCCCCcCc
Confidence            99999999999998876678999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHccccccccCCCCcccCCCCCCCC
Q 022731          241 PRAVPMVEAMVALVLMDQLMAQHAQCHLFPINPDLQGTMKLPELE  285 (293)
Q Consensus       241 pRa~pVvEAm~AlvLaD~~L~~~~~~~~~~~~~~~~~~~~~~~~~  285 (293)
                      |||+||+|||+||||||++|++++++++.++|++++.|++.+++|
T Consensus       344 pRAvpV~EAm~alvLad~~L~k~g~d~l~~~~~~~~~y~~~~~~~  388 (388)
T d1qxoa_         344 PAAGMVMEAVVATVLAQEILEKFSSDNLEELKEAVAKHRDYTKNY  388 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSCCSBHHHHHHHHHHHHHHHHTC
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999999988765
>d1q1la_ d.258.1.1 (A:) Chorismate synthase, AroC {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1sq1a_ d.258.1.1 (A:) Chorismate synthase, AroC {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure
>d1r53a_ d.258.1.1 (A:) Chorismate synthase, AroC {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1um0a_ d.258.1.1 (A:) Chorismate synthase, AroC {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1q1la_ d.258.1.1 (A:) Chorismate synthase, AroC {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1um0a_ d.258.1.1 (A:) Chorismate synthase, AroC {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1r53a_ d.258.1.1 (A:) Chorismate synthase, AroC {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1sq1a_ d.258.1.1 (A:) Chorismate synthase, AroC {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure