Citrus Sinensis ID: 022735

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290---
Protein Sequence
MGFSSKPQFLLTLSLLCFFTNLAESDTDYTTLVYKGCAKQFFQDPVSSQALSALFGSLVSQSTKTKFFKTSSGTGQASISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPNGVPRRQSSSSSSSSPDSSGPGPNTGKTVAIILGGAAGVGFVVICLLFARNLVKKHDDY
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccEEEEcccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHcccccEEEEEcccEEEEEEccccccccccccEEEEEccccccccHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEEEccEEEEEEccccccccccccccccccccccccccccccEEEEEHHHHHHHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHccccccEEEEccccccccccHHHHHHHHHHHHccccccccccEEccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHcccccEEEEEEccEEEEEccccHcccccccccEEEEccccccccHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHccHHcccccccEEEccccEEEEEEEcccccccccccccccccccccccccccHEEEEEHHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MGFSSKPQFLLTLSLLCFFtnlaesdtdyttLVYKGcakqffqdpvsSQALSALFGSLVsqstktkffktssgtgqasISGLFqcrgdlsnsdcyncvsklptlsdkqcgKTISARVQLLGCYMLyevsgfpqvsgLEMLFKTcgstnvagsgfEERRDAALQAMENGVVSGHGFYTTSYQSVFLLAQCegdlgdsdcgdcVKGAVQRAQVEcgssisgqvyLHKCFIsysyypngvprrqsssssssspdssgpgpntgKTVAIILGGAAGVGFVVICLLFARNlvkkhddy
Flexible Loop (DISEMBL)
MGFSSKPQFLLTLSLLCFFTNLAESDTDYTTLVYKGCAKQFFQDPVSSQALSALFGSLVSQSTKTKFFktssgtgqaSISGLFQCRGDLSNSDCYNCVSKlptlsdkqcgKTISARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPNGVPRRQSssssssspdssgpgPNTGKTVAIILGGAAGVGFVVICLLFARNLVKKHDDY
Low Complexity Region (SEG)
MGFSSKPQflltlsllcfftnlAESDTDYTTLVYKGCAKQFFQDPVSSQALSALFGSLVSQstktkffktssgtgQASISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPNGVPRRQsssssssspdssgpgpNTGKTvaiilggaagvgfvviCLLFARNLVKKHDDY
Disordered region (IsUnstruct)
*******QFLLTLSLLCFFTNLAESDTDYTTLVYKGCAKQFFQDPVSSQALSALFGSLVSQSTKTKFFK******QASISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPN**************************TVAIILGGAAGVGFVVICLLFARNLV******
Disordered Region (DISOPRED)
****SKP*FLLTLSLLCFFTNLAESDTDYTTLVYKGCAKQFFQDPVSSQALSALFGSLVSQSTKTKFFKTSSGTGQASISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPNGV**************************AIILGGAAGVGFVVICLLFAR**VKK****
Disordered Region (DISEMBL)
MGFSSKPQFLLTLSLLCFFTNLAESDTDYTTLVYKGCAKQFFQDPVSSQALSALFGSLVSQSTKT**********QASISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPNGV********************NTGKTVAIILGGAAGVGFVVICLLFARNLVKKHDDY
Disordered Region (DISPRO)
*GFSSKPQFLLTLSLLCFFTNLAESDTDYTTLVYKGCAKQFFQDPVSSQALSALFGSLVSQSTKTKFFKTSSGTGQASISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPNGVPR*******************TGKTVAIILGGAAGVGFVVICLLFARNLVKK****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGFSSKPQFLLTLSLLCFFTNLAESDTDYTTLVYKGCAKQFFQDPVSSQALSALFGSLVSQSTKTKFFKTSSGTGQASISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPNGVPRRQSSSSSSSSPDSSGPGPNTGKTVAIILGGAAGVGFVVICLLFARNLVKKHDDY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	293	2.2.26 [Sep-21-2011]
Q6NM73	307	Cysteine-rich repeat secr	yes	no	0.972	0.928	0.681	1e-108
O22784	304	Cysteine-rich repeat secr	no	no	1.0	0.963	0.641	1e-102
Q8GXV7	303	Cysteine-rich repeat secr	no	no	0.887	0.858	0.468	3e-59
Q6E263	319	Cysteine-rich repeat secr	no	no	0.935	0.858	0.363	3e-48
Q0WPN8	298	Cysteine-rich repeat secr	no	no	0.778	0.765	0.313	5e-23
Q9ZU94	288	Cysteine-rich repeat secr	no	no	0.894	0.909	0.3	7e-22
Q6NKQ9	279	Cysteine-rich repeat secr	no	no	0.805	0.845	0.296	3e-21
Q8GUJ2	299	Cysteine-rich repeat secr	no	no	0.784	0.769	0.286	2e-16
Q9LV60	263	Cysteine-rich repeat secr	no	no	0.699	0.779	0.262	9e-13
Q9FNE1	651	Cysteine-rich receptor-li	no	no	0.563	0.253	0.333	1e-10

>sp|Q6NM73|CRR3_ARATH Cysteine-rich repeat secretory protein 3 OS=Arabidopsis thaliana GN=CRRSP3 PE=2 SV=1

 Score =  391 bits (1004), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 205/301 (68%), Positives = 246/301 (81%), Gaps = 16/301 (5%)

Query: 9   FLLTLSLLCF-FTNL----AESDTDYTTLVYKGCAKQFFQDP--VSSQALSALFGSLVSQ 61
           FL  + ++C  F +L      + T+YTTL+YKGCA+Q F DP  + SQALSA+FGSLVSQ
Sbjct: 7   FLSIIMMMCLLFPDLNVVVKSATTEYTTLIYKGCARQQFSDPSGLYSQALSAMFGSLVSQ 66

Query: 62  STKTKFFKTSSGTGQASISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLG 121
           STKT+F+KT++GT   +I+GLFQCRGDLSN DCYNCVS+LP LSDK CGKTI++RVQL G
Sbjct: 67  STKTRFYKTTTGTSTTTITGLFQCRGDLSNHDCYNCVSRLPVLSDKLCGKTIASRVQLSG 126

Query: 122 CYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQ 181
           CY+LYEVSGF Q+SG+EMLFKTCG  N+AG+GFEERRD A   M+NGVVSGHGFY T+Y+
Sbjct: 127 CYLLYEVSGFSQISGMEMLFKTCGKNNIAGTGFEERRDTAFGVMQNGVVSGHGFYATTYE 186

Query: 182 SVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPNGVPRR- 240
           SV++L QCEGD+GD+DC  CVK A+++AQVECGSSISGQ+YLHKCFI+YSYYPNGVPRR 
Sbjct: 187 SVYVLGQCEGDVGDTDCSGCVKNALEKAQVECGSSISGQIYLHKCFIAYSYYPNGVPRRS 246

Query: 241 -------QSSSSSSSSPDSSGPGPNTGKTVAIILGGAAGVGFVVICLLFARNLV-KKHDD 292
                   SSSS SS+ D S     TGKTVAII+GGAAGVGF+VICLLFA+NL+ KKHDD
Sbjct: 247 SSSSSSSSSSSSGSSNSDPSTSTGATGKTVAIIVGGAAGVGFLVICLLFAKNLMRKKHDD 306

Query: 293 Y 293
           Y
Sbjct: 307 Y 307

Arabidopsis thaliana (taxid: 3702)

>sp|O22784|CRR11_ARATH Cysteine-rich repeat secretory protein 11 OS=Arabidopsis thaliana GN=CRRSP11 PE=2 SV=2

 Score =  373 bits (957), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 195/304 (64%), Positives = 239/304 (78%), Gaps = 11/304 (3%)

Query: 1   MGFSSKPQFLLT-LSLLCFFTNLA---ESDTDYTTLVYKGCAKQFFQDP--VSSQALSAL 54
           MGF S  Q LL  + ++  F++L     S  +YT L+YKGCA+Q   DP  + SQALSA+
Sbjct: 1   MGFYSLKQLLLLYIIIMALFSDLKLAKSSSPEYTNLIYKGCARQRLSDPSGLYSQALSAM 60

Query: 55  FGSLVSQSTKTKFFKTSSGTGQASIS-GLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTI 113
           +G LV+QSTKT+F+KT++GT   +   GLFQCRGDLSN+DCYNCVS+LP LS K CGKTI
Sbjct: 61  YGLLVTQSTKTRFYKTTTGTTSQTSVTGLFQCRGDLSNNDCYNCVSRLPVLSGKLCGKTI 120

Query: 114 SARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGH 173
           +ARVQL GCY+LYE+SGF Q+SG+E+LFKTCG  NVAG+GFE+RRD A   M+NGVV GH
Sbjct: 121 AARVQLSGCYLLYEISGFAQISGMELLFKTCGKNNVAGTGFEQRRDTAFGVMQNGVVQGH 180

Query: 174 GFYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYY 233
           GFY T+Y+SV++L QCEGD+GDSDC  C+K A+QRAQVECGSSISGQ+YLHKCF+ YS+Y
Sbjct: 181 GFYATTYESVYVLGQCEGDIGDSDCSGCIKNALQRAQVECGSSISGQIYLHKCFVGYSFY 240

Query: 234 PNGVPRR---QSSSSSSSSPDSSGPGPNTGKTVAIILGGAAGVGFVVICLLFARNLV-KK 289
           PNGVP+R     SS SS S  SS     TGKTVAII+GG AGVGF+VICLLF +NL+ KK
Sbjct: 241 PNGVPKRSSPYPSSGSSGSSSSSSSSGTTGKTVAIIVGGTAGVGFLVICLLFVKNLMKKK 300

Query: 290 HDDY 293
           +DDY
Sbjct: 301 YDDY 304

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GXV7|CRR56_ARATH Cysteine-rich repeat secretory protein 56 OS=Arabidopsis thaliana GN=CRRSP56 PE=1 SV=2

 Score =  228 bits (582), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 133/284 (46%), Positives = 175/284 (61%), Gaps = 24/284 (8%)

Query: 26  DTDYTTLVYKGCAKQFFQDP--VSSQALSALFGSLVSQSTKTKFFKTSSGTGQAS-ISGL 82
           D DY  L++KGCA Q   DP  V SQ L  LF SLVSQS+++ F   +SGT   + + G+
Sbjct: 22  DDDYKNLIFKGCANQKSPDPTGVFSQNLKNLFTSLVSQSSQSSFASVTSGTDNTTAVIGV 81

Query: 83  FQCRGDLSNSDCYNCVSKLPTLSDKQCG------KTISARVQLLGCYMLYEVSGFPQVSG 136
           FQCRGDL N+ CY+CVSK+P L  K CG        ++ARV L GCY+ YE SGF Q SG
Sbjct: 82  FQCRGDLQNAQCYDCVSKIPKLVSKLCGGGRDDGNVVAARVHLAGCYIRYESSGFRQTSG 141

Query: 137 LEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHG--------FYTTSYQSVFLLAQ 188
            EMLF+ CG  +    GF  +R+ A    ENGV +G          FY   Y+SV++L Q
Sbjct: 142 TEMLFRVCGKKDSNDPGFVGKRETAFGMAENGVKTGSSGGGGGGGGFYAGQYESVYVLGQ 201

Query: 189 CEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPNGVPRRQSSSSSSS 248
           CEG LG+SDCG+CVK   ++A+ ECG S SGQVYL KCF+SYSYY +GVP  +  S    
Sbjct: 202 CEGSLGNSDCGECVKDGFEKAKSECGESNSGQVYLQKCFVSYSYYSHGVPNIEPLSGGEK 261

Query: 249 SPDSSGPGPNTGKTVAIILGGAAGVGFVVICLLFARNLVKKHDD 292
                    +T +T+A+ +GG   +GFV++CLL  R+ +KK  +
Sbjct: 262 R-------QHTERTIALAVGGVFVLGFVIVCLLVLRSAMKKKSN 298

Arabidopsis thaliana (taxid: 3702)

>sp|Q6E263|CRR39_ARATH Cysteine-rich repeat secretory protein 39 OS=Arabidopsis thaliana GN=CRRSP39 PE=2 SV=2

 Score =  192 bits (488), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/314 (36%), Positives = 167/314 (53%), Gaps = 40/314 (12%)

Query: 11  LTLSLLCFFTNLAESDTDYTTLVYKGC--------AKQFFQDP--------VSSQALSAL 54
           L L +L   + +  S  DY TLV+K C         K   + P        + +QALS+ 
Sbjct: 13  LALIILSLPSIINTSQLDYDTLVFKQCDPLDANILQKATTKSPNYSNQNLFLRAQALSSF 72

Query: 55  FGSLVSQSTKTKFFKTSSGTGQASISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTIS 114
              L S+S+++KF KT  G  + ++SG FQCR D  +  C+ CV  L  +S + CG   S
Sbjct: 73  LRKLESESSRSKFLKTLVGNEKHAVSGWFQCREDYPSEICHKCVGDLREISSRSCGNATS 132

Query: 115 ARVQLLGCYMLY----------EVSGFPQVSGLE-----MLFKTC-GSTNVAGSGFEERR 158
           AR+ L GC+++Y          +V+   +    E     ++ K C G+T     GFEE R
Sbjct: 133 ARIHLRGCHLIYKFERIDTPGAQVNNHHKYKLFETPEHGLIHKICDGATAETFPGFEEMR 192

Query: 159 DAALQAMENGVVSGHGFYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSIS 218
             AL A E GVV GHGFY  SY+ + ++AQC+G +   DCG+C+  A   A  EC  SI+
Sbjct: 193 TEALTAAETGVVDGHGFYEDSYKLLHVVAQCDGHVEACDCGECISSAAAAAAEECRWSIA 252

Query: 219 GQVYLHKCFISYSYYPNGVPRRQSSSSSSSSPDSSGPGPNTGKTVAIILGGAAGVGFVVI 278
           GQ+YL  C + Y+Y+P+ +P        + S    G   NTGK++AI++GG A + FV I
Sbjct: 253 GQIYLEGCHVGYTYHPHELP--------NDSYHEEGSKVNTGKSLAIVVGGVAALVFVAI 304

Query: 279 CLLFARNLVKKHDD 292
             +F ++L KK DD
Sbjct: 305 FFMFLKSLRKKGDD 318

Arabidopsis thaliana (taxid: 3702)

>sp|Q0WPN8|CRR60_ARATH Cysteine-rich repeat secretory protein 60 OS=Arabidopsis thaliana GN=CRRSP60 PE=1 SV=1

 Score =  108 bits (270), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 119/239 (49%), Gaps = 11/239 (4%)

Query: 1   MGFSSKPQFLLTLSLLCFFT-----NLAESDTDYTTLVYKGCAKQFFQDPVSSQA-LSAL 54
           M  +     + TLS+  F       +L+ + +   T V+ GC++Q F    + ++ L++L
Sbjct: 1   MPMAKLRNIIKTLSIFFFLIAATAPSLSSATSATDTFVFGGCSQQKFSPASAYESNLNSL 60

Query: 55  FGSLVSQSTKTKF--FKTSSGTGQASISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKT 112
             SLV+ +T + +  F     +   +  GLFQCRGDLS  DC  CV++  +     C  T
Sbjct: 61  LTSLVNSATYSSYNNFTIMGSSSSDTARGLFQCRGDLSMPDCATCVARAVSQVGPLCPFT 120

Query: 113 ISARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSG 172
               +QL GCY+ Y+   F       ++ K CGS+    +    RRDA L  + NG   G
Sbjct: 121 CGGALQLAGCYIKYDNISFLGQEDKTVVLKKCGSSEGYNTDGISRRDAVLTELVNG---G 177

Query: 173 HGFYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYS 231
             F       V  + QC GDL  S+C DC+  A+ R + +CG+++ G ++L KC+  YS
Sbjct: 178 GYFRAGGSGDVQGMGQCVGDLTVSECQDCLGTAIGRLKNDCGTAVFGDMFLAKCYARYS 236

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZU94|CRR12_ARATH Cysteine-rich repeat secretory protein 12 OS=Arabidopsis thaliana GN=CRRSP12 PE=2 SV=2

 Score =  104 bits (260), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 138/280 (49%), Gaps = 18/280 (6%)

Query: 9   FLLTLSLLCFFTNLAESDTDYTTLVYKGCAKQ-FFQDPVSSQALSALFGSLVSQSTKTKF 67
           F+  +SLL  F++ A       T +Y GC+++ +F        +++L  S VS ++   +
Sbjct: 9   FIAVVSLLGTFSSAA-----VDTFIYGGCSQEKYFPGSPYESNVNSLLTSFVSSASLYTY 63

Query: 68  --FKTSSGTGQAS-ISGLFQCRGDLSNS--DCYNCVSKLPTLSDKQCGKTISARVQLLGC 122
             F T+  +G +S + GL+QCRGDLS+   DC  CV++  +     C       +QL GC
Sbjct: 64  NNFTTNGISGDSSSVYGLYQCRGDLSSGSGDCARCVARAVSRLGSLCAMASGGALQLEGC 123

Query: 123 YMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQS 182
           ++ Y+ + F  V    ++ + CG      S    RRD+ + ++     SG  +       
Sbjct: 124 FVKYDNTTFLGVEDKTVVVRRCGPPVGYNSDEMTRRDSVVGSL--AASSGGSYRVGVSGE 181

Query: 183 VFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPNGVPRRQS 242
           +  +AQC GDL  ++C DC+  A+ R + +CG +  G VYL KC+  YS    G  R   
Sbjct: 182 LQGVAQCTGDLSATECQDCLMEAIGRLRTDCGGAAWGDVYLAKCYARYS-ARGGHSRANG 240

Query: 243 SSSSSSSPDSSGPGPNTGKTVAIILGGAAGVGFVVICLLF 282
              + ++ D         KT+AII+G  AGV  +V+ L F
Sbjct: 241 YGGNRNNNDD----DEIEKTLAIIVGLIAGVTLLVVFLSF 276

Arabidopsis thaliana (taxid: 3702)

>sp|Q6NKQ9|CRR15_ARATH Cysteine-rich repeat secretory protein 15 OS=Arabidopsis thaliana GN=CRRSP15 PE=2 SV=1

 Score =  102 bits (255), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 30/266 (11%)

Query: 32  LVYKGCAKQFF--QDPVSSQALSALFGSLVSQSTKTKFFKTSSGTGQA------SISGLF 83
            +Y GC+ + +    P  S        S+V+ S+   F   + G   +      ++ GL+
Sbjct: 29  FIYGGCSPEKYTPNTPFESNR-DTFLSSVVTSSSDASFNSFAVGNDSSSSSSSSAVFGLY 87

Query: 84  QCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLEMLFKT 143
           QCR DL +SDC  C+          C  +  A +QL GC++ YE + F       + +K 
Sbjct: 88  QCRDDLRSSDCSKCIQTSVDQITLICPYSYGASLQLEGCFLRYETNDFLGKPDTSLRYKK 147

Query: 144 CGSTNVAGS-GFEERRDAALQAMENGVVSGHGFYTTSYQSVFLLAQCEGDLGDSDCGDCV 202
           C S +V     F +RRD  L  +E+  +   G+  +    V   AQC GDL  SDC  C+
Sbjct: 148 CSSKSVENDYDFFKRRDDVLSDLESTQL---GYKVSRSGLVEGYAQCVGDLSPSDCTACL 204

Query: 203 KGAVQRAQVECGSSISGQVYLHKCFISY---SYYPNGVPRRQSSSSSSSSPDSSGPGPNT 259
             +V + +  CGS+++ +VYL +C+  Y    YY             SS P +   G + 
Sbjct: 205 AESVGKLKNLCGSAVAAEVYLAQCYARYWGSGYY-----------DFSSDPTN---GDHV 250

Query: 260 GKTVAIILGGAAGVGFVVICLLFARN 285
           GK++AII+G  AG   +V+ L   RN
Sbjct: 251 GKSIAIIVGVIAGFAILVVLLSLCRN 276

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GUJ2|CRR2_ARATH Cysteine-rich repeat secretory protein 2 OS=Arabidopsis thaliana GN=CRRSP2 PE=2 SV=1

 Score = 86.7 bits (213), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 116/262 (44%), Gaps = 32/262 (12%)

Query: 12  TLSLLCFFTNLA-----ESDTDYTTLVYKGCAKQFFQDPVSSQA-LSALFGSLVSQSTKT 65
           T SLLCF           S +     +Y  C+   F      +  L++L  S V+ + +T
Sbjct: 6   TTSLLCFLLTAVILMNPSSSSPTDNYIYAVCSPAKFSPSSGYETNLNSLLSSFVTSTAQT 65

Query: 66  KFFKTSSGTGQ----ASISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLG 121
           ++   +  TG+     ++ G++QCRGDL  + C  CVS         C  + S  +Q+  
Sbjct: 66  RYANFTVPTGKPEPTVTVYGIYQCRGDLDPTACSTCVSSAVAQVGALCSNSYSGFLQMEN 125

Query: 122 CYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAME--NGVVSGHGFYTTS 179
           C + Y+   F  V    ++   CG        F ++ DA  +A +    + +G G Y T 
Sbjct: 126 CLIRYDNKSFLGVQDKTLILNKCGQP----MEFNDQ-DALTKASDVIGSLGTGDGSYRTG 180

Query: 180 YQ-SVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPNGVP 238
              +V  +AQC GDL  S C DC+  A+ R + +CG +  G VYL KC+  +S    G  
Sbjct: 181 GNGNVQGVAQCSGDLSTSQCQDCLSDAIGRLKSDCGMAQGGYVYLSKCYARFSV--GGSH 238

Query: 239 RRQSSSSSSSSPDSSGPGPNTG 260
            RQ+            PGPN G
Sbjct: 239 ARQT------------PGPNFG 248

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LV60|CRR55_ARATH Cysteine-rich repeat secretory protein 55 OS=Arabidopsis thaliana GN=CRRSP55 PE=2 SV=1

 Score = 74.3 bits (181), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 31/236 (13%)

Query: 48  SQALSALFGSLVSQSTKTKFFKT---SSGTGQASISGLFQCRGDLSNSDCYNCVSKLPTL 104
           S+ + +L  +LVS+ T +K FKT   SS   +  + GL QCRGD+SN+DC  C+      
Sbjct: 41  SKNIDSLLATLVSK-TPSKGFKTTTSSSYNNKEKVYGLAQCRGDISNTDCSTCIQDAAKK 99

Query: 105 SDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLE-----MLFKTCGST--------NVAG 151
             + C     +R+    C++ Y    F  +  L+     + F     T        N  G
Sbjct: 100 IREVCQNQSDSRILYDFCFLRYSQENF--IGKLDTGAGLIYFNVANVTEIDPKKFDNELG 157

Query: 152 SGFEERRDAALQAMENGVVSGHGFYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQV 211
           + F++ R  A+     G+  G     T + ++  L QC  DL + DC  C   AV     
Sbjct: 158 ALFDKIRSEAVLPKNKGLGKGKT-KLTPFVTLNGLVQCTRDLSELDCAQCFATAVGSFMT 216

Query: 212 ECGSSISGQVYLHKCFISYSYYPNGVPRRQSSSSSSSSPDSSGPGPNTGKTVAIIL 267
            C +    +V    C++ Y +YP   P            D +  GP+ G+  ++ L
Sbjct: 217 TCHNKKGCRVLYSSCYVRYEFYPFYFPL-----------DPAKTGPSVGRISSVHL 261

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FNE1|CRK42_ARATH Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1

 Score = 67.4 bits (163), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 78/177 (44%), Gaps = 12/177 (6%)

Query: 59  VSQSTKTKFFKTSSGTGQASISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQ 118
           +S    T+ F T S     SI  L QC  DLS SDC  C +   T    +C  + SAR+ 
Sbjct: 64  LSLKLTTRRFATESLNSTTSIYALIQCHDDLSPSDCQLCYAIART-RIPRCLPSSSARIF 122

Query: 119 LLGCYMLYEVSGF--PQVSGLEMLFKTCGSTNVAGS--GFEERRDAALQAMENGVVSGHG 174
           L GC++ YE   F    VS     F +C +  V     GF+    AA  A+  G     G
Sbjct: 123 LDGCFLRYETYEFYDESVSDASDSF-SCSNDTVLDPRFGFQVSETAARVAVRKG-----G 176

Query: 175 FYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYS 231
           F       V  LAQC   LG  DC  C++ AV+  +  C S   G+     C++ YS
Sbjct: 177 FGVAGENGVHALAQCWESLGKEDCRVCLEKAVKEVK-RCVSRREGRAMNTGCYLRYS 232

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	293
147863491	523	hypothetical protein VITISV_018684 [Viti	0.989	0.554	0.736	1e-119
225433259	295	PREDICTED: cysteine-rich repeat secretor	0.989	0.983	0.724	1e-118
449487484	301	PREDICTED: cysteine-rich repeat secretor	0.989	0.963	0.743	1e-117
449527300	303	PREDICTED: cysteine-rich repeat secretor	1.0	0.966	0.742	1e-116
449458908	324	PREDICTED: cysteine-rich repeat secretor	0.928	0.839	0.776	1e-115
356576446	297	PREDICTED: cysteine-rich repeat secretor	0.935	0.922	0.753	1e-115
449432508	301	PREDICTED: cysteine-rich repeat secretor	0.989	0.963	0.73	1e-115
356575214	299	PREDICTED: cysteine-rich repeat secretor	0.989	0.969	0.718	1e-114
388514791	300	unknown [Lotus japonicus]	0.928	0.906	0.767	1e-113
255637905	304	unknown [Glycine max]	0.982	0.947	0.71	1e-112

>gi|147863491|emb|CAN81929.1| hypothetical protein VITISV_018684 [Vitis vinifera]

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/296 (73%), Positives = 253/296 (85%), Gaps = 6/296 (2%)

Query: 1   MGFSSKPQFLLTLSLLCF----FTNLAESDTDYTTLVYKGCAKQFFQDPVSSQALSALFG 56
           MGF +KP  LL L ++ F     T LAES TDYT LVYKGCA+Q   DP + QALSALFG
Sbjct: 1   MGFPTKPFSLLFLFMVLFTNLELTPLAESATDYTALVYKGCAEQALSDPNAGQALSALFG 60

Query: 57  SLVSQSTKTKFFKTSSGTGQASISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTISAR 116
           SLVSQSTK KFFKT+SGTGQ SI+GLFQCRGDLS SDCYNCV+KLP +SDK CGK+I++R
Sbjct: 61  SLVSQSTKAKFFKTTSGTGQTSITGLFQCRGDLSTSDCYNCVNKLPQMSDKLCGKSIASR 120

Query: 117 VQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHGFY 176
           +QL GCY+LYEV+GF Q+SG++ML+KTC +TNVAGSGFEERRD A  +ME+G+VSGHGFY
Sbjct: 121 IQLYGCYILYEVAGFAQISGMKMLYKTCSATNVAGSGFEERRDTAFSSMESGMVSGHGFY 180

Query: 177 TTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPNG 236
            TSY+SV++L QCEGD+GD+DC +CVK AVQRAQVECGSSISGQ+YLHKCFISYSYYPNG
Sbjct: 181 ATSYESVYVLGQCEGDVGDADCSECVKSAVQRAQVECGSSISGQIYLHKCFISYSYYPNG 240

Query: 237 VPRRQSSSSSSSSPDSSGPGPNTGKTVAIILGGAAGVGFVVICLLFARNLVKKHDD 292
           VPRR SS SSSSS  SSG    TGKTVAII+GGAA +GFVVIC+LFARNL+KKH+D
Sbjct: 241 VPRRSSSDSSSSS--SSGTRQTTGKTVAIIVGGAAALGFVVICMLFARNLMKKHED 294

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225433259|ref|XP_002285462.1| PREDICTED: cysteine-rich repeat secretory protein 3 [Vitis vinifera] gi|296083727|emb|CBI23716.3| unnamed protein product [Vitis vinifera]

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 216/298 (72%), Positives = 251/298 (84%), Gaps = 8/298 (2%)

Query: 1   MGFSSKPQFLLTLSLLCFFTNL-----AESDTDYTTLVYKGCAKQFFQDPVSSQALSALF 55
           MGF +KP F L    +  FTNL     AES TDYT LVYKGCA+Q   DP + QALSALF
Sbjct: 1   MGFPTKP-FSLLFPFMVLFTNLELTPLAESATDYTALVYKGCAEQALSDPNAGQALSALF 59

Query: 56  GSLVSQSTKTKFFKTSSGTGQASISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTISA 115
           GSLVSQSTK KFFKT+SGTGQ SI+GLFQCRGDLS SDCYNCV+KLP +SDK CG +I++
Sbjct: 60  GSLVSQSTKAKFFKTTSGTGQTSITGLFQCRGDLSTSDCYNCVNKLPQMSDKLCGTSIAS 119

Query: 116 RVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHGF 175
           R+QL GCY+LYEV+GF Q+SG++ML+KTC +TNVAGSGF ERRD A  +ME+G+VSGHGF
Sbjct: 120 RIQLYGCYILYEVAGFAQISGMKMLYKTCSATNVAGSGFAERRDTAFSSMESGMVSGHGF 179

Query: 176 YTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPN 235
           Y TSY+SV++L QCEGD+GD+DC +CVK AVQRAQVECGSSISGQ+YLHKCFISYSYYPN
Sbjct: 180 YATSYESVYVLGQCEGDVGDADCSECVKSAVQRAQVECGSSISGQIYLHKCFISYSYYPN 239

Query: 236 GVPRRQSSSSSSSSPDSSGPGPNTGKTVAIILGGAAGVGFVVICLLFARNLVKKHDDY 293
           GVPRR SS SSSSS  SSG    TGKTVAII+GGAA +GFVVIC+LFARNL+KKH+D+
Sbjct: 240 GVPRRSSSDSSSSS--SSGTRQTTGKTVAIIVGGAAALGFVVICMLFARNLMKKHEDF 295

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449487484|ref|XP_004157649.1| PREDICTED: cysteine-rich repeat secretory protein 3-like [Cucumis sativus]

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 223/300 (74%), Positives = 250/300 (83%), Gaps = 10/300 (3%)

Query: 1   MGFSSKPQF---LLTLSLLCFFTNL--AESDTDYTTLVYKGCAKQFFQDP--VSSQALSA 53
           MG SS   F   LL+L+    FT +  A+S +DYT+LVYKGCAKQ   DP  V +QALSA
Sbjct: 5   MGISSFNPFCTLLLSLAFFSIFTLIPPAQSGSDYTSLVYKGCAKQALSDPTGVYTQALSA 64

Query: 54  LFGSLVSQSTKTKFFKTSSGTGQASISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTI 113
           LFGSLVSQSTK +F+KTSSG+GQ++I+GLFQCRGDLSN DCYNCVSK+P +    CGKTI
Sbjct: 65  LFGSLVSQSTKARFYKTSSGSGQSTINGLFQCRGDLSNGDCYNCVSKIPQIVQSLCGKTI 124

Query: 114 SARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGH 173
           +ARVQL GCY+LYEVSGF Q+SG EML+KTCGSTNVAGSGFEERRD AL  +ENGVVSGH
Sbjct: 125 AARVQLYGCYLLYEVSGFAQISGFEMLYKTCGSTNVAGSGFEERRDTALSVLENGVVSGH 184

Query: 174 GFYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYY 233
           GFYTT+YQSV++L QCEGDLGDSDCG+CVK AVQRAQVECGSSISGQ+YLH+CFISYSYY
Sbjct: 185 GFYTTNYQSVYVLGQCEGDLGDSDCGECVKNAVQRAQVECGSSISGQLYLHRCFISYSYY 244

Query: 234 PNGVPRRQSSSSSSSSPDSSGPGPNTGKTVAIILGGAAGVGFVVICLLFARNLVKKHDDY 293
           PNGVP R SS SSSSS  S G   N GKTVAIILG  AGV FVVICLLFAR L+KKHDDY
Sbjct: 245 PNGVPTRSSSPSSSSSSSSGG---NIGKTVAIILGSTAGVAFVVICLLFARGLMKKHDDY 301

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449527300|ref|XP_004170650.1| PREDICTED: cysteine-rich repeat secretory protein 3-like [Cucumis sativus]

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 225/303 (74%), Positives = 250/303 (82%), Gaps = 10/303 (3%)

Query: 1   MGFSSKPQFLLTLSLLCFFTN----LAESDTDYTTLVYKGCAKQFFQDP--VSSQALSAL 54
           MGF SKP F         F      L ES +DYTTLVYKGCAKQ F DP  V SQAL+AL
Sbjct: 1   MGFYSKPFFFFFFFFFFSFFLFVACLVESGSDYTTLVYKGCAKQGFSDPNGVYSQALAAL 60

Query: 55  FGSLVSQSTK-TKFFKTSSGTGQASISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTI 113
           FGSLVSQS K +KFFKT+SGT Q +I+GLFQCRGDLSNSDCYNCVSKLP L+D  CG+TI
Sbjct: 61  FGSLVSQSAKGSKFFKTTSGTTQTAITGLFQCRGDLSNSDCYNCVSKLPQLADSLCGRTI 120

Query: 114 SARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGH 173
           +ARVQL GCY+LYE  GF Q+SG EML+KTCG+TN+AGSGFEERRD  L  +ENGVVSGH
Sbjct: 121 AARVQLSGCYLLYEFPGFVQISGFEMLYKTCGATNIAGSGFEERRDTGLSVLENGVVSGH 180

Query: 174 GFYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYY 233
           GFYTT+YQS+++LAQCEGDLGDSDCG+CVK AVQ+AQVECGSSISGQVYLHKCFISYSYY
Sbjct: 181 GFYTTNYQSLYVLAQCEGDLGDSDCGECVKHAVQKAQVECGSSISGQVYLHKCFISYSYY 240

Query: 234 PNGVPRR---QSSSSSSSSPDSSGPGPNTGKTVAIILGGAAGVGFVVICLLFARNLVKKH 290
           PNGVP+R    S+SSSS S   SG G NTGKTVA+ILGGAAGVGF+VICLLF RNL KKH
Sbjct: 241 PNGVPKRSSSPSTSSSSYSSSPSGMGQNTGKTVAVILGGAAGVGFLVICLLFIRNLKKKH 300

Query: 291 DDY 293
           DDY
Sbjct: 301 DDY 303

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449458908|ref|XP_004147188.1| PREDICTED: cysteine-rich repeat secretory protein 3-like [Cucumis sativus]

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 216/278 (77%), Positives = 242/278 (87%), Gaps = 6/278 (2%)

Query: 22  LAESDTDYTTLVYKGCAKQFFQDP--VSSQALSALFGSLVSQSTK-TKFFKTSSGTGQAS 78
           L ES +DYTTLVYKGCAKQ F DP  V SQAL+ALFGSLVSQS K +KFFKT+SGT Q +
Sbjct: 47  LVESGSDYTTLVYKGCAKQGFSDPNGVYSQALAALFGSLVSQSAKGSKFFKTTSGTTQTA 106

Query: 79  ISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLE 138
           I+GLFQCRGDLSNSDCYNCVSKLP L+D  CG+TI+ARV+L GCY+LYE  GF Q+SG E
Sbjct: 107 ITGLFQCRGDLSNSDCYNCVSKLPQLADSLCGRTIAARVKLSGCYLLYEFPGFVQISGFE 166

Query: 139 MLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQSVFLLAQCEGDLGDSDC 198
           ML+KTCG+TN+AGSGFEERRD  L  +ENGVVSGHGFYTT+YQS+++LAQCEGDLGDSDC
Sbjct: 167 MLYKTCGATNIAGSGFEERRDTGLSVLENGVVSGHGFYTTNYQSLYVLAQCEGDLGDSDC 226

Query: 199 GDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPNGVPRR---QSSSSSSSSPDSSGP 255
           G+CVK AVQ+AQVECGSSISGQVYLHKCFISYSYYPNGVP+R    S+SSSS S   SG 
Sbjct: 227 GECVKHAVQKAQVECGSSISGQVYLHKCFISYSYYPNGVPKRSSSPSTSSSSYSSSPSGM 286

Query: 256 GPNTGKTVAIILGGAAGVGFVVICLLFARNLVKKHDDY 293
           G NTGKTVA+ILGGAAGVGF+VICLLF RNL KKHDDY
Sbjct: 287 GQNTGKTVAVILGGAAGVGFLVICLLFIRNLKKKHDDY 324

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576446|ref|XP_003556342.1| PREDICTED: cysteine-rich repeat secretory protein 3-like [Glycine max]

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/280 (75%), Positives = 241/280 (86%), Gaps = 6/280 (2%)

Query: 20  TNLAESDTDYTTLVYKGCAKQFFQDP--VSSQALSALFGSLVSQSTKTKFFKTSSGTGQA 77
           TNLAES +DYTTLVYKGC+K+ F DP  V SQALS+LFGSLVSQSTK KFFK ++G+GQ+
Sbjct: 18  TNLAESASDYTTLVYKGCSKETFTDPNGVYSQALSSLFGSLVSQSTKAKFFKATAGSGQS 77

Query: 78  SISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGL 137
           S++GLFQCR DLSNSDCYNCVS+LP LSDK CGKT +AR+QLLGCYMLYEV GF Q+SG+
Sbjct: 78  SMTGLFQCRDDLSNSDCYNCVSRLPVLSDKLCGKTTAARIQLLGCYMLYEVVGFTQISGM 137

Query: 138 EMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQSVFLLAQCEGDLGDSD 197
           ++L+KTCG TN AG GFEERRD A   MENGVV+GHGFY TSYQS++++ QCEGD+GDSD
Sbjct: 138 QILYKTCGGTNAAGRGFEERRDTAFSVMENGVVTGHGFYATSYQSLYVMGQCEGDVGDSD 197

Query: 198 CGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPNGVPRRQ----SSSSSSSSPDSS 253
           CG+CVK AVQRAQVECGSSISGQVYLHKCFISYSYYPNGVP R     SSSS+S S  SS
Sbjct: 198 CGECVKSAVQRAQVECGSSISGQVYLHKCFISYSYYPNGVPGRHSSSASSSSNSYSSSSS 257

Query: 254 GPGPNTGKTVAIILGGAAGVGFVVICLLFARNLVKKHDDY 293
             G NTGKTVAII+GGAAGV F+VICL+FAR+L KK DDY
Sbjct: 258 SSGQNTGKTVAIIVGGAAGVAFLVICLMFARSLKKKRDDY 297

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432508|ref|XP_004134041.1| PREDICTED: cysteine-rich repeat secretory protein 3-like [Cucumis sativus]

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 219/300 (73%), Positives = 247/300 (82%), Gaps = 10/300 (3%)

Query: 1   MGFSSKPQF---LLTLSLLCFFTNL--AESDTDYTTLVYKGCAKQFFQDP--VSSQALSA 53
           MG SS   F   LL+L+    FT +  A+S +DYT+LVYKGCAKQ   DP  V +QALSA
Sbjct: 5   MGISSFNPFCTLLLSLAFFSIFTLIPPAQSGSDYTSLVYKGCAKQALSDPTGVYTQALSA 64

Query: 54  LFGSLVSQSTKTKFFKTSSGTGQASISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTI 113
           LFGSLVSQSTK +F++TSSG+GQ++I+GLFQCRGDLSN DCYNCVSK+P +    CGKTI
Sbjct: 65  LFGSLVSQSTKARFYRTSSGSGQSTINGLFQCRGDLSNGDCYNCVSKIPQIVQSLCGKTI 124

Query: 114 SARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGH 173
           +ARVQL GCY+LYEVSGF Q+SG EML+KTCGS N  GSGFEERRD AL  +ENGVVSGH
Sbjct: 125 AARVQLYGCYLLYEVSGFAQISGFEMLYKTCGSMNAPGSGFEERRDTALSVLENGVVSGH 184

Query: 174 GFYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYY 233
           GFYTT+YQSV++L QCEGDLGDSDCG+CVK AVQRAQVECGSSISGQ+YLH+CFISYSYY
Sbjct: 185 GFYTTNYQSVYVLGQCEGDLGDSDCGECVKNAVQRAQVECGSSISGQLYLHRCFISYSYY 244

Query: 234 PNGVPRRQSSSSSSSSPDSSGPGPNTGKTVAIILGGAAGVGFVVICLLFARNLVKKHDDY 293
           PNGVP R SS SSSSS  S G   N GKTVAIILG  AGV FVVICLLFAR L+KKHDDY
Sbjct: 245 PNGVPTRSSSPSSSSSSSSGG---NIGKTVAIILGSTAGVAFVVICLLFARGLMKKHDDY 301

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575214|ref|XP_003555737.1| PREDICTED: cysteine-rich repeat secretory protein 3-like [Glycine max]

 Score =  417 bits (1071), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 217/302 (71%), Positives = 250/302 (82%), Gaps = 12/302 (3%)

Query: 1   MGFSSKPQFLLTLSLLCFFTNLAE-------SDTDYTTLVYKGCAKQFFQDP--VSSQAL 51
           MGF+ KP F + L L  F T+L E       + +DY+TLVYKGC+K+ F DP  V SQAL
Sbjct: 1   MGFTRKPMFPVLLVL--FITSLLEPPHVAESTSSDYSTLVYKGCSKEPFTDPNGVYSQAL 58

Query: 52  SALFGSLVSQSTKTKFFKTSSGTGQASISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGK 111
           SALFGSLVSQSTK KF+KT+SG+GQ +I+GLFQCRGDL+NSDCYNCVS+LP L DK CGK
Sbjct: 59  SALFGSLVSQSTKAKFYKTTSGSGQNTITGLFQCRGDLTNSDCYNCVSRLPVLCDKLCGK 118

Query: 112 TISARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVS 171
           T +ARVQLLGCY+LYEV+GF Q+SG++ML+KTCG+TN AG GFEERRD A   MENGVVS
Sbjct: 119 TTAARVQLLGCYILYEVAGFSQISGMQMLYKTCGATNAAGRGFEERRDTAFSVMENGVVS 178

Query: 172 GHGFYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYS 231
           GHGFYTTSYQS++++ QCEGD+GDSDCG+CVK AVQRAQVECGSSISGQV+LHKCFISYS
Sbjct: 179 GHGFYTTSYQSLYVMGQCEGDVGDSDCGECVKNAVQRAQVECGSSISGQVFLHKCFISYS 238

Query: 232 YYPNGVPRRQSSSSSSSSPDSSGPGPNTGKTVAIILGGAAGVGFVVICLLFARNLVKKHD 291
           YYPNGVP R SSSSS+S   SS  G N GKT AIILGGA  V F+VI LLFAR+L KKHD
Sbjct: 239 YYPNGVPSRSSSSSSASY-SSSSSGQNPGKTAAIILGGAVAVAFLVILLLFARSLKKKHD 297

Query: 292 DY 293
           DY
Sbjct: 298 DY 299

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388514791|gb|AFK45457.1| unknown [Lotus japonicus]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 211/275 (76%), Positives = 237/275 (86%), Gaps = 3/275 (1%)

Query: 22  LAESDTDYTTLVYKGCAKQFFQDP--VSSQALSALFGSLVSQSTKTKFFKTSSGTGQASI 79
           LAES   YT+LVYKGC+K  F DP  V SQALSALFGSLVSQSTK KFFK ++G+GQ+SI
Sbjct: 26  LAESAAAYTSLVYKGCSKDTFSDPNGVYSQALSALFGSLVSQSTKGKFFKATTGSGQSSI 85

Query: 80  SGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLEM 139
           +GLFQCRGDLSNSDCYNCVSKLP LSDK CGKT++ARVQL GCYMLYEV+GF Q+SG+EM
Sbjct: 86  TGLFQCRGDLSNSDCYNCVSKLPVLSDKLCGKTVAARVQLQGCYMLYEVAGFAQISGMEM 145

Query: 140 LFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQSVFLLAQCEGDLGDSDCG 199
           LFK+CG+TN AG GFEERRD A   M NGVVSGHGFY TSYQS++++ QCEGD+GDSDCG
Sbjct: 146 LFKSCGTTNAAGRGFEERRDTAFSVMANGVVSGHGFYATSYQSLYVMGQCEGDVGDSDCG 205

Query: 200 DCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPNGVPRR-QSSSSSSSSPDSSGPGPN 258
            CVK AVQ+AQVECGSSISGQVYLHKCF+SY+YYPNGVPR   S+ SSSSS  SS  G N
Sbjct: 206 QCVKFAVQKAQVECGSSISGQVYLHKCFMSYNYYPNGVPRHASSAGSSSSSGSSSFSGQN 265

Query: 259 TGKTVAIILGGAAGVGFVVICLLFARNLVKKHDDY 293
            GKTVAIILGGAAGV F++I LLFARNL+KKHDDY
Sbjct: 266 AGKTVAIILGGAAGVAFLIIMLLFARNLMKKHDDY 300

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637905|gb|ACU19270.1| unknown [Glycine max]

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 213/300 (71%), Positives = 246/300 (82%), Gaps = 12/300 (4%)

Query: 1   MGFSSKPQFLLTLSLLCFFTNLAE-------SDTDYTTLVYKGCAKQFFQDP--VSSQAL 51
           MGF+ KP F + L L  F T+L E       + +DY+TLVYKGC+K+ F DP  V SQAL
Sbjct: 1   MGFTRKPMFPVLLVL--FITSLLEPPHVAESTSSDYSTLVYKGCSKEPFTDPNGVYSQAL 58

Query: 52  SALFGSLVSQSTKTKFFKTSSGTGQASISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGK 111
           SALFGSLVSQSTK KF+KT+SG+GQ +I+GLFQCRGDL+NSDCYNCVS+LP L DK CGK
Sbjct: 59  SALFGSLVSQSTKAKFYKTTSGSGQNTITGLFQCRGDLTNSDCYNCVSRLPVLCDKLCGK 118

Query: 112 TISARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVS 171
           T +ARVQLLGCY+LYEV+GF Q+SG++ML+KTCG+TN AG GFEERRD A   MENGVVS
Sbjct: 119 TTAARVQLLGCYILYEVAGFSQISGMQMLYKTCGATNAAGRGFEERRDTAFSVMENGVVS 178

Query: 172 GHGFYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYS 231
           GHGFYTTSYQS++++ QCEGD+GDSDCG+CVK AVQRAQVECGSSISGQV+LHKCFISYS
Sbjct: 179 GHGFYTTSYQSLYVMGQCEGDVGDSDCGECVKNAVQRAQVECGSSISGQVFLHKCFISYS 238

Query: 232 YYPNGVPRRQSSSSSSSSPDSSGPGPNTGKTVAIILGGAAGVGFVVICLLFARNLVKKHD 291
           YYPNGVP R   SSS+S   SS  G N GKT AIILGGA  V F+VI LLFAR+L KKHD
Sbjct: 239 YYPNGVPSRSFFSSSASY-SSSSSGQNPGKTAAIILGGAVAVAFLVILLLFARSLKKKHD 297

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	293
TAIR|locus:2018314	307	PDLP2 "AT1G04520" [Arabidopsis	0.911	0.869	0.607	1.5e-90
TAIR|locus:2051089	304	PDLP3 "AT2G33330" [Arabidopsis	0.918	0.884	0.576	2e-86
TAIR|locus:2172492	303	PDLP1 "plasmodesmata-located p	0.658	0.636	0.495	1.1e-48
TAIR|locus:2100870	319	PDLP4 "plasmodesmata-located p	0.808	0.742	0.337	2.5e-33
TAIR|locus:2151709	298	PDLP7 "plasmodesmata-located p	0.692	0.681	0.347	1.8e-25
TAIR|locus:2065450	288	PDLP6 "AT2G01660" [Arabidopsis	0.675	0.687	0.307	4.3e-22
TAIR|locus:2101811	279	PDLP8 "AT3G60720" [Arabidopsis	0.709	0.745	0.283	9.2e-20
TAIR|locus:2033614	299	HWI1 "HOPW1-1-INDUCED GENE1" [	0.689	0.675	0.276	3.6e-18
TAIR|locus:2166091	263	AT5G48540 "AT5G48540" [Arabido	0.634	0.707	0.245	6.1e-12
TAIR|locus:2026821	649	CRK2 "cysteine-rich RLK (RECEP	0.522	0.235	0.317	2e-08

TAIR|locus:2018314 PDLP2 "AT1G04520" [Arabidopsis thaliana (taxid:3702)]

 Score = 903 (322.9 bits), Expect = 1.5e-90, P = 1.5e-90
 Identities = 169/278 (60%), Positives = 199/278 (71%)

Query:    27 TDYTTLVYKGCAKQFFQDP--VSSQALSALFGSLVSQXXXXXXXXXXXXXXQASISGLFQ 84
             T+YTTL+YKGCA+Q F DP  + SQALSA+FGSLVSQ                +I+GLFQ
Sbjct:    30 TEYTTLIYKGCARQQFSDPSGLYSQALSAMFGSLVSQSTKTRFYKTTTGTSTTTITGLFQ 89

Query:    85 CRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLEMLFKTC 144
             CRGDLSN DCYNCVS+LP LSDK CGKTI++RVQL GCY+LYEVSGF Q+SG+EMLFKTC
Sbjct:    90 CRGDLSNHDCYNCVSRLPVLSDKLCGKTIASRVQLSGCYLLYEVSGFSQISGMEMLFKTC 149

Query:   145 GSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQSVFLLAQCEGDLGDSDCGDCVKG 204
             G  N+AG+GFEERRD A   M+NGVVSGHGFY T+Y+SV++L QCEGD+GD+DC  CVK 
Sbjct:   150 GKNNIAGTGFEERRDTAFGVMQNGVVSGHGFYATTYESVYVLGQCEGDVGDTDCSGCVKN 209

Query:   205 AVQRAQVECGSSISGQVYLHKCFISYSYYPNGVPRRQXXXXXXXXXXXXXXXXN------ 258
             A+++AQVECGSSISGQ+YLHKCFI+YSYYPNGVPRR                 +      
Sbjct:   210 ALEKAQVECGSSISGQIYLHKCFIAYSYYPNGVPRRSSSSSSSSSSSSSGSSNSDPSTST 269

Query:   259 --TGKTXXXXXXXXXXXXXXXXCLLFARNLV-KKHDDY 293
               TGKT                CLLFA+NL+ KKHDDY
Sbjct:   270 GATGKTVAIIVGGAAGVGFLVICLLFAKNLMRKKHDDY 307

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009506 "plasmodesma" evidence=IDA

GO:0010497 "plasmodesmata-mediated intercellular transport" evidence=IGI

GO:0046739 "spread of virus in multicellular host" evidence=IGI

TAIR|locus:2051089 PDLP3 "AT2G33330" [Arabidopsis thaliana (taxid:3702)]

 Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
 Identities = 159/276 (57%), Positives = 193/276 (69%)

Query:    25 SDTDYTTLVYKGCAKQFFQDP--VSSQALSALFGSLVSQXXXXXXXXXXX-XXXQASISG 81
             S  +YT L+YKGCA+Q   DP  + SQALSA++G LV+Q               Q S++G
Sbjct:    29 SSPEYTNLIYKGCARQRLSDPSGLYSQALSAMYGLLVTQSTKTRFYKTTTGTTSQTSVTG 88

Query:    82 LFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLEMLF 141
             LFQCRGDLSN+DCYNCVS+LP LS K CGKTI+ARVQL GCY+LYE+SGF Q+SG+E+LF
Sbjct:    89 LFQCRGDLSNNDCYNCVSRLPVLSGKLCGKTIAARVQLSGCYLLYEISGFAQISGMELLF 148

Query:   142 KTCGSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQSVFLLAQCEGDLGDSDCGDC 201
             KTCG  NVAG+GFE+RRD A   M+NGVV GHGFY T+Y+SV++L QCEGD+GDSDC  C
Sbjct:   149 KTCGKNNVAGTGFEQRRDTAFGVMQNGVVQGHGFYATTYESVYVLGQCEGDIGDSDCSGC 208

Query:   202 VKGAVQRAQVECGSSISGQVYLHKCFISYSYYPNGVPRRQX---XXXXXXXXXXXXXXXN 258
             +K A+QRAQVECGSSISGQ+YLHKCF+ YS+YPNGVP+R                     
Sbjct:   209 IKNALQRAQVECGSSISGQIYLHKCFVGYSFYPNGVPKRSSPYPSSGSSGSSSSSSSSGT 268

Query:   259 TGKTXXXXXXXXXXXXXXXXCLLFARNLVKK-HDDY 293
             TGKT                CLLF +NL+KK +DDY
Sbjct:   269 TGKTVAIIVGGTAGVGFLVICLLFVKNLMKKKYDDY 304

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0009506 "plasmodesma" evidence=IDA

GO:0010497 "plasmodesmata-mediated intercellular transport" evidence=IGI

GO:0046739 "spread of virus in multicellular host" evidence=IGI

TAIR|locus:2172492 PDLP1 "plasmodesmata-located protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 103/208 (49%), Positives = 127/208 (61%)

Query:    46 VSSQALSALFGSLVSQXXXXXXXXXXXXXXQAS-ISGLFQCRGDLSNSDCYNCVSKLPTL 104
             V SQ L  LF SLVSQ                + + G+FQCRGDL N+ CY+CVSK+P L
Sbjct:    44 VFSQNLKNLFTSLVSQSSQSSFASVTSGTDNTTAVIGVFQCRGDLQNAQCYDCVSKIPKL 103

Query:   105 SDKQCG------KTISARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERR 158
               K CG        ++ARV L GCY+ YE SGF Q SG EMLF+ CG  +    GF  +R
Sbjct:   104 VSKLCGGGRDDGNVVAARVHLAGCYIRYESSGFRQTSGTEMLFRVCGKKDSNDPGFVGKR 163

Query:   159 DAALQAMENGVVSGH--------GFYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQ 210
             + A    ENGV +G         GFY   Y+SV++L QCEG LG+SDCG+CVK   ++A+
Sbjct:   164 ETAFGMAENGVKTGSSGGGGGGGGFYAGQYESVYVLGQCEGSLGNSDCGECVKDGFEKAK 223

Query:   211 VECGSSISGQVYLHKCFISYSYYPNGVP 238
              ECG S SGQVYL KCF+SYSYY +GVP
Sbjct:   224 SECGESNSGQVYLQKCFVSYSYYSHGVP 251

GO:0005576 "extracellular region" evidence=ISM

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0010497 "plasmodesmata-mediated intercellular transport" evidence=IGI

GO:0046739 "spread of virus in multicellular host" evidence=IGI

TAIR|locus:2100870 PDLP4 "plasmodesmata-located protein 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 88/261 (33%), Positives = 125/261 (47%)

Query:    48 SQALSALFGSLVSQXXXXXXXXXXXXXXQASISGLFQCRGDLSNSDCYNCVSKLPTLSDK 107
             +QALS+    L S+              + ++SG FQCR D  +  C+ CV  L  +S +
Sbjct:    66 AQALSSFLRKLESESSRSKFLKTLVGNEKHAVSGWFQCREDYPSEICHKCVGDLREISSR 125

Query:   108 QCGKTISARVQLLGCYMLYEVSGF--P--QVSGLEM--LFKT---------C-GSTNVAG 151
              CG   SAR+ L GC+++Y+      P  QV+      LF+T         C G+T    
Sbjct:   126 SCGNATSARIHLRGCHLIYKFERIDTPGAQVNNHHKYKLFETPEHGLIHKICDGATAETF 185

Query:   152 SGFEERRDAALQAMENGVVSGHGFYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQV 211
              GFEE R  AL A E GVV GHGFY  SY+ + ++AQC+G +   DCG+C+  A   A  
Sbjct:   186 PGFEEMRTEALTAAETGVVDGHGFYEDSYKLLHVVAQCDGHVEACDCGECISSAAAAAAE 245

Query:   212 ECGSSISGQVYLHKCFISYSYYPNGVPRRQXXXXXXXXXXXXXXXXNTGKTXXXXXXXXX 271
             EC  SI+GQ+YL  C + Y+Y+P+ +P                   NTGK+         
Sbjct:   246 ECRWSIAGQIYLEGCHVGYTYHPHELPN--------DSYHEEGSKVNTGKSLAIVVGGVA 297

Query:   272 XXXXXXXCLLFARNLVKKHDD 292
                      +F ++L KK DD
Sbjct:   298 ALVFVAIFFMFLKSLRKKGDD 318

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2151709 PDLP7 "plasmodesmata-located protein 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 74/213 (34%), Positives = 107/213 (50%)

Query:    23 AESDTDYTTLVYKGCAKQFFQDPVSSQA--LSALFGSLVSQXXXXXXXXXXXXXXQASIS 80
             A S TD  T V+ GC++Q F  P S+    L++L  SLV+                +S +
Sbjct:    30 ATSATD--TFVFGGCSQQKFS-PASAYESNLNSLLTSLVNSATYSSYNNFTIMGSSSSDT 86

Query:    81 --GLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLE 138
               GLFQCRGDLS  DC  CV++  +     C  T    +QL GCY+ Y+   F       
Sbjct:    87 ARGLFQCRGDLSMPDCATCVARAVSQVGPLCPFTCGGALQLAGCYIKYDNISFLGQEDKT 146

Query:   139 MLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQSVFLLAQCEGDLGDSDC 198
             ++ K CGS+    +    RRDA L  + NG   G+ F       V  + QC GDL  S+C
Sbjct:   147 VVLKKCGSSEGYNTDGISRRDAVLTELVNG--GGY-FRAGGSGDVQGMGQCVGDLTVSEC 203

Query:   199 GDCVKGAVQRAQVECGSSISGQVYLHKCFISYS 231
              DC+  A+ R + +CG+++ G ++L KC+  YS
Sbjct:   204 QDCLGTAIGRLKNDCGTAVFGDMFLAKCYARYS 236

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2065450 PDLP6 "AT2G01660" [Arabidopsis thaliana (taxid:3702)]

 Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 64/208 (30%), Positives = 97/208 (46%)

Query:    31 TLVYKGCAKQ-FFQ-DPVSSQALSAL--FGSLVSQXXXXXXXXXXXXXXQASISGLFQCR 86
             T +Y GC+++ +F   P  S   S L  F S  S                +S+ GL+QCR
Sbjct:    26 TFIYGGCSQEKYFPGSPYESNVNSLLTSFVSSASLYTYNNFTTNGISGDSSSVYGLYQCR 85

Query:    87 GDLSNS--DCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLEMLFKTC 144
             GDLS+   DC  CV++  +     C       +QL GC++ Y+ + F  V    ++ + C
Sbjct:    86 GDLSSGSGDCARCVARAVSRLGSLCAMASGGALQLEGCFVKYDNTTFLGVEDKTVVVRRC 145

Query:   145 GSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQSVFL-LAQCEGDLGDSDCGDCVK 203
             G      S    RRD+ + ++     S  G Y          +AQC GDL  ++C DC+ 
Sbjct:   146 GPPVGYNSDEMTRRDSVVGSL---AASSGGSYRVGVSGELQGVAQCTGDLSATECQDCLM 202

Query:   204 GAVQRAQVECGSSISGQVYLHKCFISYS 231
              A+ R + +CG +  G VYL KC+  YS
Sbjct:   203 EAIGRLRTDCGGAAWGDVYLAKCYARYS 230

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2101811 PDLP8 "AT3G60720" [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 63/222 (28%), Positives = 102/222 (45%)

Query:    23 AESDTDYTTLVYKGCAKQFF--QDPVSSQA---LSALFGSL--VSQXXXXXXXXXXXXXX 75
             + S ++    +Y GC+ + +    P  S     LS++  S    S               
Sbjct:    20 SRSSSESHIFIYGGCSPEKYTPNTPFESNRDTFLSSVVTSSSDASFNSFAVGNDSSSSSS 79

Query:    76 QASISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVS 135
              +++ GL+QCR DL +SDC  C+          C  +  A +QL GC++ YE + F    
Sbjct:    80 SSAVFGLYQCRDDLRSSDCSKCIQTSVDQITLICPYSYGASLQLEGCFLRYETNDFLGKP 139

Query:   136 GLEMLFKTCGSTNVAGS-GFEERRDAALQAMENGVVSGHGFYTTSYQSVFLLAQCEGDLG 194
                + +K C S +V     F +RRD  L  +E+  +   G+  +    V   AQC GDL 
Sbjct:   140 DTSLRYKKCSSKSVENDYDFFKRRDDVLSDLESTQL---GYKVSRSGLVEGYAQCVGDLS 196

Query:   195 DSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISY---SYY 233
              SDC  C+  +V + +  CGS+++ +VYL +C+  Y    YY
Sbjct:   197 PSDCTACLAESVGKLKNLCGSAVAAEVYLAQCYARYWGSGYY 238

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2033614 HWI1 "HOPW1-1-INDUCED GENE1" [Arabidopsis thaliana (taxid:3702)]

 Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 60/217 (27%), Positives = 95/217 (43%)

Query:    23 AESDTDYTTLVYKGCAKQFFQDPVSSQA-LSALFGSLVSQXXXXXXXXXXXXXXQ----A 77
             + S TD    +Y  C+   F      +  L++L  S V+               +     
Sbjct:    24 SSSPTD--NYIYAVCSPAKFSPSSGYETNLNSLLSSFVTSTAQTRYANFTVPTGKPEPTV 81

Query:    78 SISGLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGL 137
             ++ G++QCRGDL  + C  CVS         C  + S  +Q+  C + Y+   F  V   
Sbjct:    82 TVYGIYQCRGDLDPTACSTCVSSAVAQVGALCSNSYSGFLQMENCLIRYDNKSFLGVQDK 141

Query:   138 EMLFKTCGSTNVAGSGFEERRDAALQAME--NGVVSGHGFYTTSYQ-SVFLLAQCEGDLG 194
              ++   CG        F ++ DA  +A +    + +G G Y T    +V  +AQC GDL 
Sbjct:   142 TLILNKCGQP----MEFNDQ-DALTKASDVIGSLGTGDGSYRTGGNGNVQGVAQCSGDLS 196

Query:   195 DSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYS 231
              S C DC+  A+ R + +CG +  G VYL KC+  +S
Sbjct:   197 TSQCQDCLSDAIGRLKSDCGMAQGGYVYLSKCYARFS 233

GO:0005576 "extracellular region" evidence=ISM

GO:0051707 "response to other organism" evidence=IEP

GO:0009506 "plasmodesma" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0006914 "autophagy" evidence=RCA

TAIR|locus:2166091 AT5G48540 "AT5G48540" [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 6.1e-12, P = 6.1e-12
 Identities = 49/200 (24%), Positives = 81/200 (40%)

Query:    48 SQALSALFGSLVSQXXXXXXXXXXXXXX--QASISGLFQCRGDLSNSDCYNCVSKLPTLS 105
             S+ + +L  +LVS+                +  + GL QCRGD+SN+DC  C+       
Sbjct:    41 SKNIDSLLATLVSKTPSKGFKTTTSSSYNNKEKVYGLAQCRGDISNTDCSTCIQDAAKKI 100

Query:   106 DKQCGKTISARVQLLGCYMLYEVSGF--PQVSGLEML-FKTCGST--------NVAGSGF 154
              + C     +R+    C++ Y    F     +G  ++ F     T        N  G+ F
Sbjct:   101 REVCQNQSDSRILYDFCFLRYSQENFIGKLDTGAGLIYFNVANVTEIDPKKFDNELGALF 160

Query:   155 EERRDAALQAMENGVVSGHGFYTTSYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECG 214
             ++ R  A+     G+  G     T + ++  L QC  DL + DC  C   AV      C 
Sbjct:   161 DKIRSEAVLPKNKGLGKGKT-KLTPFVTLNGLVQCTRDLSELDCAQCFATAVGSFMTTCH 219

Query:   215 SSISGQVYLHKCFISYSYYP 234
             +    +V    C++ Y +YP
Sbjct:   220 NKKGCRVLYSSCYVRYEFYP 239

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0080167 "response to karrikin" evidence=IEP

TAIR|locus:2026821 CRK2 "cysteine-rich RLK (RECEPTOR-like protein kinase) 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 55/173 (31%), Positives = 74/173 (42%)

Query:    81 GLFQCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYE-VSGFPQVSGLEM 139
             GL QC GDL  +DC  C ++  T+   QC      R+ L GC+M  E  S + +  G E 
Sbjct:    85 GLAQCYGDLPLNDCVLCYAEARTMLP-QCYPQNGGRIFLDGCFMRAENYSFYNEYKGPED 143

Query:   140 LFKTCGSTNVAGSGFEERRDAALQAMENGVV--SGHGFYT--------TSYQSVFLLAQC 189
                 CG+T      F    DA  Q + N V   SG G Y         +  +S F+LA C
Sbjct:   144 SI-VCGNTTRKNKTFG---DAVRQGLRNAVTEASGTGGYARASAKAGESESESAFVLANC 199

Query:   190 EGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHK-CFISYSY--YPNGVPR 239
                L    C  C++ A       C     G+  LH  CF+ YS   + N +PR
Sbjct:   200 WRTLSPDSCKQCLENASASVVKGCLPWSEGRA-LHTGCFLRYSDQDFLNKIPR 251

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0010193 "response to ozone" evidence=IEP

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006457 "protein folding" evidence=RCA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0009408 "response to heat" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6NM73	CRR3_ARATH	No assigned EC number	0.6810	0.9726	0.9283	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	293
pfam01657	106	pfam01657, Stress-antifung, Salt stress response/a	3e-17
pfam01657	106	pfam01657, Stress-antifung, Salt stress response/a	5e-13

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal

 Score = 75.2 bits (185), Expect = 3e-17
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 6/96 (6%)

Query: 145 GSTNVAGSGFEERRDAALQAMENGVVSGH--GFYTTS----YQSVFLLAQCEGDLGDSDC 198
           G+   A S FE   +A L ++ +   S    GF   +      +V+ LAQC GDL  SDC
Sbjct: 10  GNYTTANSTFESNLNALLSSLSSNAASSSGKGFAAGTSGAAPDTVYGLAQCRGDLSASDC 69

Query: 199 GDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYP 234
             C+  AV   +  C +   G+++   CF+ Y  YP
Sbjct: 70  RSCLATAVSELRRCCPNKKGGRIWYDSCFLRYESYP 105

This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

>gnl|CDD|216632 pfam01657, Stress-antifung, Salt stress response/antifungal

 Score = 64.0 bits (156), Expect = 5e-13
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 3/86 (3%)

Query: 49  QALSALFGSLVSQSTKTK---FFKTSSGTGQASISGLFQCRGDLSNSDCYNCVSKLPTLS 105
             L+AL  SL S +  +    F   +SG    ++ GL QCRGDLS SDC +C++   +  
Sbjct: 21  SNLNALLSSLSSNAASSSGKGFAAGTSGAAPDTVYGLAQCRGDLSASDCRSCLATAVSEL 80

Query: 106 DKQCGKTISARVQLLGCYMLYEVSGF 131
            + C      R+    C++ YE   F
Sbjct: 81  RRCCPNKKGGRIWYDSCFLRYESYPF 106

This domain is often found in association with the kinase domains pfam00069 or pfam07714. In many proteins it is duplicated. It contains six conserved cysteines which are involved in disulphide bridges. It has a role in salt stress response and has antifungal activity. Length = 106

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	293
PF01657	106	Stress-antifung: Salt stress response/antifungal;	99.9
PF01657	106	Stress-antifung: Salt stress response/antifungal;	99.87
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	97.29
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	95.02
PTZ00382	96	Variant-specific surface protein (VSP); Provisiona	93.76
PF02009	299	Rifin_STEVOR: Rifin/stevor family; InterPro: IPR00	93.54
PF02439	38	Adeno_E3_CR2: Adenovirus E3 region protein CR2; In	93.4
PF06697	278	DUF1191: Protein of unknown function (DUF1191); In	92.78
PF04478	154	Mid2: Mid2 like cell wall stress sensor; InterPro:	92.61
PF14610	189	DUF4448: Protein of unknown function (DUF4448)	92.03
PF12877	684	DUF3827: Domain of unknown function (DUF3827); Int	89.25
PF15102	146	TMEM154: TMEM154 protein family	88.32
PF01034	64	Syndecan: Syndecan domain; InterPro: IPR001050 The	87.25
PF15345	233	TMEM51: Transmembrane protein 51	86.79
PTZ00046	358	rifin; Provisional	86.76
TIGR01477	353	RIFIN variant surface antigen, rifin family. This	86.2
PF02480	439	Herpes_gE: Alphaherpesvirus glycoprotein E; InterP	85.47
PF08374	221	Protocadherin: Protocadherin; InterPro: IPR013585	85.06
PF03302	397	VSP: Giardia variant-specific surface protein; Int	84.5
PF02439	38	Adeno_E3_CR2: Adenovirus E3 region protein CR2; In	81.07

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function

Probab=99.90  E-value=5.6e-24  Score=167.62  Aligned_cols=98  Identities=34%  Similarity=0.557  Sum_probs=73.9

Q ss_pred             ccccc-c-Cccc-CCCh--HHHHHHHHHHhhhccCC---CCceeeecCCCCCcEEEEEEcCCCCChhhhHHHHHHhHHhh
Q 022735           34 YKGCA-K-QFFQ-DPVS--SQALSALFGSLVSQSTK---TKFFKTSSGTGQASISGLFQCRGDLSNSDCYNCVSKLPTLS  105 (293)
Q Consensus        34 ~~~C~-~-~~~~-~~ns--~~NL~~ll~~L~s~~~~---~~f~~~s~G~~pd~vygl~~CrgD~~~~~C~~Cv~~a~~~~  105 (293)
                      |+.|+ + .+++ +.++  +.||+.||.+|..+++.   .+|+++..|.++++||||+||++|+++++|+.||+.|...+
T Consensus         1 ~~~Cs~~~~~~~~~~~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~   80 (106)
T PF01657_consen    1 WHFCSSNTNNNYTTDNSTFEQNLNSLLSSLVSNAASSSSKGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADAVANI   80 (106)
T ss_dssp             ---E---SSB----TT-THHHHHHHHHHHHHHHGGGTT-TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHHHCCH
T ss_pred             CCcCCCCCCCCcCCCCchHHHHHHHHHHHHHHHHhhccccCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHHHHHH
Confidence            78899 3 3434 4455  99999999999988653   37998888999999999999999999999999999999999


Q ss_pred             hhhcCCCcceEEEccceEEEEeeccc
Q 022735          106 DKQCGKTISARVQLLGCYMLYEVSGF  131 (293)
Q Consensus       106 ~~~C~~~~~a~i~~d~C~lRYsn~~f  131 (293)
                      .+.|+..++|++|++.|+|||++++|
T Consensus        81 ~~~C~~~~g~~v~~~~C~lRY~~~~F  106 (106)
T PF01657_consen   81 SSCCPGSRGGRVWYDSCFLRYENYPF  106 (106)
T ss_dssp             HHHTTSBSSEEEEESSEEEEEESS--
T ss_pred             HHhCCCCceEEEECCCEEEEEECCCC
Confidence            99999999999999999999999987

The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>PF01657 Stress-antifung: Salt stress response/antifungal; InterPro: IPR002902 This domain is found in plants and has no known function

Probab=99.87  E-value=1.6e-22  Score=159.26  Aligned_cols=85  Identities=36%  Similarity=0.688  Sum_probs=68.9

Q ss_pred             CchHHHHHHHHHHHHhhccccC--Cccccc----cCCeEEEEEEcCCCCChhhHHHHHHHHHHHHhhhCCCCccEEEEcC
Q 022735          151 GSGFEERRDAALQAMENGVVSG--HGFYTT----SYQSVFLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLH  224 (293)
Q Consensus       151 ~~~f~~~~~~~~~~l~~~~~~~--~~f~~~----~~~~vYgLaQCt~DLs~~~C~~CL~~a~~~i~~~C~~~~ggrv~~~  224 (293)
                      ++.|+.+++.++..+...++.+  .+|+++    ..++||||+||++||++++|+.||+.++.+++++|++++||+|+++
T Consensus        16 ~~~f~~~l~~ll~~l~~~a~~~~~~~f~~~~~~~~~~~vYgl~qC~~Dls~~dC~~Cl~~a~~~~~~~C~~~~g~~v~~~   95 (106)
T PF01657_consen   16 NSTFEQNLNSLLSSLVSNAASSSSKGFATGSAGSGPDTVYGLAQCRGDLSPSDCRACLADAVANISSCCPGSRGGRVWYD   95 (106)
T ss_dssp             T-THHHHHHHHHHHHHHHGGGTT-TEEEEEE--ST---EEEEEEE-TTS-HHHHHHHHHHHHCCHHHHTTSBSSEEEEES
T ss_pred             CchHHHHHHHHHHHHHHHHhhccccCcEEeecCCCCCeEEEEEEcCCCCChhhhHHHHHHHHHHHHHhCCCCceEEEECC
Confidence            4569999999999998775533  356554    4679999999999999999999999999999999999999999999


Q ss_pred             eeEEEEecCCC
Q 022735          225 KCFISYSYYPN  235 (293)
Q Consensus       225 ~C~lRYe~y~f  235 (293)
                      +|+||||+|+|
T Consensus        96 ~C~lRY~~~~F  106 (106)
T PF01657_consen   96 SCFLRYENYPF  106 (106)
T ss_dssp             SEEEEEESS--
T ss_pred             CEEEEEECCCC
Confidence            99999999998

The structure of this domain is known and it is thought to be involved in antifungal responses in plants []. Two copies of this domain are also found together in cysteine-rich protein kinases and cysteine-rich repeat secretory proteins. The domain contains four conserved cysteines.; PDB: 3A2E_D.

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=97.29  E-value=0.00015  Score=46.43  Aligned_cols=27  Identities=15%  Similarity=0.082  Sum_probs=16.7

Q ss_pred             EEEEeehHHHHHHHHHHHHHHHHHhhh
Q 022735          262 TVAIILGGAAGVGFVVICLLFARNLVK  288 (293)
Q Consensus       262 iiaivv~~v~~~~~~~~~~~~~rr~~k  288 (293)
                      .+++++|++++++++.+.+++||||+|
T Consensus        14 a~~VvVPV~vI~~vl~~~l~~~~rR~k   40 (40)
T PF08693_consen   14 AVGVVVPVGVIIIVLGAFLFFWYRRKK   40 (40)
T ss_pred             EEEEEechHHHHHHHHHHhheEEeccC
Confidence            367778877666555555555666543

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=95.02  E-value=0.011  Score=47.62  Aligned_cols=21  Identities=29%  Similarity=0.180  Sum_probs=13.9

Q ss_pred             CCCCCCcEEEEeehHHHHHHH
Q 022735          255 PGPNTGKTVAIILGGAAGVGF  275 (293)
Q Consensus       255 ~~~~~~~iiaivv~~v~~~~~  275 (293)
                      ++...+.|++|++++++.+++
T Consensus        59 h~fs~~~i~~Ii~gv~aGvIg   79 (122)
T PF01102_consen   59 HRFSEPAIIGIIFGVMAGVIG   79 (122)
T ss_dssp             SSSS-TCHHHHHHHHHHHHHH
T ss_pred             cCccccceeehhHHHHHHHHH
Confidence            344556688888888877643

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>PTZ00382 Variant-specific surface protein (VSP); Provisional

Probab=93.76  E-value=0.055  Score=41.69  Aligned_cols=19  Identities=32%  Similarity=0.319  Sum_probs=14.0

Q ss_pred             CCCCCCcEEEEeehHHHHH
Q 022735          255 PGPNTGKTVAIILGGAAGV  273 (293)
Q Consensus       255 ~~~~~~~iiaivv~~v~~~  273 (293)
                      .+.+++.|++|+|++++++
T Consensus        61 ~~ls~gaiagi~vg~~~~v   79 (96)
T PTZ00382         61 SGLSTGAIAGISVAVVAVV   79 (96)
T ss_pred             CCcccccEEEEEeehhhHH
Confidence            3456678999999877665

>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world

Probab=93.54  E-value=0.024  Score=52.57  Aligned_cols=29  Identities=31%  Similarity=0.200  Sum_probs=16.7

Q ss_pred             EEEEeehHHHHHHHHHHHHHHHHHhhhcc
Q 022735          262 TVAIILGGAAGVGFVVICLLFARNLVKKH  290 (293)
Q Consensus       262 iiaivv~~v~~~~~~~~~~~~~rr~~kk~  290 (293)
                      |++.+++++++|+++++.|++||.||||+
T Consensus       258 I~aSiiaIliIVLIMvIIYLILRYRRKKK  286 (299)
T PF02009_consen  258 IIASIIAILIIVLIMVIIYLILRYRRKKK  286 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            45556666555555556666666665443

Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].

>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []

Probab=93.40  E-value=0.068  Score=33.72  Aligned_cols=18  Identities=39%  Similarity=0.863  Sum_probs=11.9

Q ss_pred             EEEEeehHHHHHHHHHHH
Q 022735          262 TVAIILGGAAGVGFVVIC  279 (293)
Q Consensus       262 iiaivv~~v~~~~~~~~~  279 (293)
                      .|+|++++++.++++++|
T Consensus         5 ~IaIIv~V~vg~~iiii~   22 (38)
T PF02439_consen    5 TIAIIVAVVVGMAIIIIC   22 (38)
T ss_pred             hhhHHHHHHHHHHHHHHH
Confidence            588888877766444433

This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.

>PF06697 DUF1191: Protein of unknown function (DUF1191); InterPro: IPR010605 This family contains hypothetical plant proteins of unknown function

Probab=92.78  E-value=0.18  Score=46.05  Aligned_cols=19  Identities=16%  Similarity=-0.179  Sum_probs=10.2

Q ss_pred             CCCCCCCCcEEEE-eehHHH
Q 022735          253 SGPGPNTGKTVAI-ILGGAA  271 (293)
Q Consensus       253 ~~~~~~~~~iiai-vv~~v~  271 (293)
                      .+++...|++|.- ++++++
T Consensus       206 ~~~~~~~W~iv~g~~~G~~~  225 (278)
T PF06697_consen  206 PRKRSWWWKIVVGVVGGVVL  225 (278)
T ss_pred             cCCcceeEEEEEEehHHHHH
Confidence            3566667775443 444443

>PF04478 Mid2: Mid2 like cell wall stress sensor; InterPro: IPR007567 This family represents a region near the C terminus of Mid2, which contains a transmembrane region

Probab=92.61  E-value=0.065  Score=44.49  Aligned_cols=14  Identities=7%  Similarity=0.375  Sum_probs=9.3

Q ss_pred             CcEEEEeehHHHHH
Q 022735          260 GKTVAIILGGAAGV  273 (293)
Q Consensus       260 ~~iiaivv~~v~~~  273 (293)
                      ..||++|||+-+++
T Consensus        49 nIVIGvVVGVGg~i   62 (154)
T PF04478_consen   49 NIVIGVVVGVGGPI   62 (154)
T ss_pred             cEEEEEEecccHHH
Confidence            34788998864443

The remainder of the protein sequence is serine-rich and of low complexity, and is therefore impossible to align accurately. Mid2 is thought to act as a mechanosensor of cell wall stress. The C-terminal cytoplasmic region of Mid2 is known to interact with Rom2, a guanine nucleotide exchange factor (GEF) for Rho1, which is part of the cell wall integrity signalling pathway [].

>PF14610 DUF4448: Protein of unknown function (DUF4448)

Probab=92.03  E-value=0.18  Score=43.56  Aligned_cols=29  Identities=21%  Similarity=0.047  Sum_probs=17.7

Q ss_pred             CCcEEEEeehHHHHHHHHHHHHHHHHHhh
Q 022735          259 TGKTVAIILGGAAGVGFVVICLLFARNLV  287 (293)
Q Consensus       259 ~~~iiaivv~~v~~~~~~~~~~~~~rr~~  287 (293)
                      .+..++|+||++++++++++.++++++|+
T Consensus       156 ~~~~laI~lPvvv~~~~~~~~~~~~~~R~  184 (189)
T PF14610_consen  156 GKYALAIALPVVVVVLALIMYGFFFWNRK  184 (189)
T ss_pred             cceeEEEEccHHHHHHHHHHHhhheeecc
Confidence            44479999999887755544333333333

>PF12877 DUF3827: Domain of unknown function (DUF3827); InterPro: IPR024606 The function of the proteins in this entry is not currently known, but one of the human proteins (Q9HCM3 from SWISSPROT) has been implicated in pilocytic astrocytomas [, , ]

Probab=89.25  E-value=0.31  Score=49.11  Aligned_cols=29  Identities=10%  Similarity=0.080  Sum_probs=18.9

Q ss_pred             CCCCCCCCcEEEEeehHHHHHHHHHHHHH
Q 022735          253 SGPGPNTGKTVAIILGGAAGVGFVVICLL  281 (293)
Q Consensus       253 ~~~~~~~~~iiaivv~~v~~~~~~~~~~~  281 (293)
                      ...+++.|.|+++++|+.+++++++++++
T Consensus       263 ~s~~~NlWII~gVlvPv~vV~~Iiiil~~  291 (684)
T PF12877_consen  263 KSPPNNLWIIAGVLVPVLVVLLIIIILYW  291 (684)
T ss_pred             CCCCCCeEEEehHhHHHHHHHHHHHHHHH
Confidence            34567888888888887666544444333

In the majority of cases of pilocytic astrocytomas a tandem duplication produces an in-frame fusion of the gene encoding this protein and the BRAF oncogene. The resulting fusion protein has constitutive BRAF kinase activity and is capable of transforming cells.

>PF15102 TMEM154: TMEM154 protein family

Probab=88.32  E-value=0.3  Score=40.32  Aligned_cols=12  Identities=17%  Similarity=0.058  Sum_probs=8.2

Q ss_pred             EEEEeehHHHHH
Q 022735          262 TVAIILGGAAGV  273 (293)
Q Consensus       262 iiaivv~~v~~~  273 (293)
                      ++.|+||.|+++
T Consensus        58 iLmIlIP~VLLv   69 (146)
T PF15102_consen   58 ILMILIPLVLLV   69 (146)
T ss_pred             EEEEeHHHHHHH
Confidence            788888855443

>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]

Probab=87.25  E-value=0.18  Score=35.67  Aligned_cols=12  Identities=42%  Similarity=0.803  Sum_probs=0.0

Q ss_pred             EEEEeehHHHHH
Q 022735          262 TVAIILGGAAGV  273 (293)
Q Consensus       262 iiaivv~~v~~~  273 (293)
                      ..++|.++|+.+
T Consensus        11 laavIaG~Vvgl   22 (64)
T PF01034_consen   11 LAAVIAGGVVGL   22 (64)
T ss_dssp             ------------
T ss_pred             HHHHHHHHHHHH
Confidence            345555554443

Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.

>PF15345 TMEM51: Transmembrane protein 51

Probab=86.79  E-value=2.4  Score=37.72  Aligned_cols=31  Identities=23%  Similarity=0.313  Sum_probs=17.6

Q ss_pred             CCcEEEEeehHHHHH-HHHHHHHHHHHHhhhc
Q 022735          259 TGKTVAIILGGAAGV-GFVVICLLFARNLVKK  289 (293)
Q Consensus       259 ~~~iiaivv~~v~~~-~~~~~~~~~~rr~~kk  289 (293)
                      +.-+||.|+.++-++ +++.+|+.++.|||++
T Consensus        56 Kt~SVAyVLVG~Gv~LLLLSICL~IR~KRr~r   87 (233)
T PF15345_consen   56 KTFSVAYVLVGSGVALLLLSICLSIRDKRRRR   87 (233)
T ss_pred             eeEEEEEehhhHHHHHHHHHHHHHHHHHHHHh
Confidence            334577776555433 5556777765555443

>PTZ00046 rifin; Provisional

Probab=86.76  E-value=0.22  Score=47.03  Aligned_cols=28  Identities=32%  Similarity=0.228  Sum_probs=13.3

Q ss_pred             EEEeehHHHHHHHHHHHHHHHHHhhhcc
Q 022735          263 VAIILGGAAGVGFVVICLLFARNLVKKH  290 (293)
Q Consensus       263 iaivv~~v~~~~~~~~~~~~~rr~~kk~  290 (293)
                      ++-|+++|++|+++++.|++.|-||||+
T Consensus       318 iaSiiAIvVIVLIMvIIYLILRYRRKKK  345 (358)
T PTZ00046        318 IASIVAIVVIVLIMVIIYLILRYRRKKK  345 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcch
Confidence            3334444444444455566555544443

>TIGR01477 RIFIN variant surface antigen, rifin family

Probab=86.20  E-value=0.25  Score=46.58  Aligned_cols=27  Identities=33%  Similarity=0.214  Sum_probs=12.8

Q ss_pred             EEEeehHHHHHHHHHHHHHHHHHhhhc
Q 022735          263 VAIILGGAAGVGFVVICLLFARNLVKK  289 (293)
Q Consensus       263 iaivv~~v~~~~~~~~~~~~~rr~~kk  289 (293)
                      ++-++++|++|+++++.|++.|-||||
T Consensus       313 iaSiIAIvvIVLIMvIIYLILRYRRKK  339 (353)
T TIGR01477       313 IASIIAILIIVLIMVIIYLILRYRRKK  339 (353)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            333444444444445556655544444

This model represents the rifin branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of rifin sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 20 bits.

>PF02480 Herpes_gE: Alphaherpesvirus glycoprotein E; InterPro: IPR003404 Glycoprotein E (gE) of Alphaherpesvirus forms a complex with glycoprotein I (gI), functioning as an immunoglobulin G (IgG) Fc binding protein

Probab=85.47  E-value=0.25  Score=48.30  Aligned_cols=12  Identities=25%  Similarity=0.434  Sum_probs=8.6

Q ss_pred             EEcCCCCChhhH
Q 022735          187 AQCEGDLGDSDC  198 (293)
Q Consensus       187 aQCt~DLs~~~C  198 (293)
                      ..|.++-.+.+|
T Consensus       239 ~~C~~~~~~~~C  250 (439)
T PF02480_consen  239 ANCSPSGWPRRC  250 (439)
T ss_dssp             EEEBTTC-TTTT
T ss_pred             cCCCCCCCcCCC
Confidence            679998777777

gE is involved in virus spread but is not essential for propagation [].; GO: 0016020 membrane; PDB: 2GJ7_F 2GIY_B.

>PF08374 Protocadherin: Protocadherin; InterPro: IPR013585 The structure of protocadherins is similar to that of classic cadherins (IPR002126 from INTERPRO), but they also have some unique features associated with the cytoplasmic domains

Probab=85.06  E-value=1.2  Score=39.12  Aligned_cols=20  Identities=15%  Similarity=0.117  Sum_probs=11.9

Q ss_pred             CCCcEEEEeehHHHHHHHHH
Q 022735          258 NTGKTVAIILGGAAGVGFVV  277 (293)
Q Consensus       258 ~~~~iiaivv~~v~~~~~~~  277 (293)
                      ....+||||.|+++++++++
T Consensus        36 ~~~I~iaiVAG~~tVILVI~   55 (221)
T PF08374_consen   36 YVKIMIAIVAGIMTVILVIF   55 (221)
T ss_pred             ceeeeeeeecchhhhHHHHH
Confidence            34456788877766653333

They are expressed in a variety of organisms and are found in high concentrations in the brain where they seem to be localised mainly at cell-cell contact sites. Their expression seems to be developmentally regulated [].

>PF03302 VSP: Giardia variant-specific surface protein; InterPro: IPR005127 During infection, the intestinal protozoan parasite Giardia lamblia virus undergoes continuous antigenic variation which is determined by diversification of the parasite's major surface antigen, named VSP (variant surface protein)

Probab=84.50  E-value=0.75  Score=44.44  Aligned_cols=29  Identities=28%  Similarity=0.439  Sum_probs=17.9

Q ss_pred             CCCCcEEEEeehHHHHH-HHH-HHHHHHHHH
Q 022735          257 PNTGKTVAIILGGAAGV-GFV-VICLLFARN  285 (293)
Q Consensus       257 ~~~~~iiaivv~~v~~~-~~~-~~~~~~~rr  285 (293)
                      -+++.|.+|.|++|++| .|+ +++|||.-|
T Consensus       364 LstgaIaGIsvavvvvVgglvGfLcWwf~cr  394 (397)
T PF03302_consen  364 LSTGAIAGISVAVVVVVGGLVGFLCWWFICR  394 (397)
T ss_pred             ccccceeeeeehhHHHHHHHHHHHhhheeec
Confidence            35777899998877776 333 344444333

>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []

Probab=81.07  E-value=0.58  Score=29.57  Aligned_cols=27  Identities=7%  Similarity=0.064  Sum_probs=14.1

Q ss_pred             EEEEeehHHHHHHHHHHHHHHHHHhhh
Q 022735          262 TVAIILGGAAGVGFVVICLLFARNLVK  288 (293)
Q Consensus       262 iiaivv~~v~~~~~~~~~~~~~rr~~k  288 (293)
                      +|+-|+.+++++++.+++|.+.+||.+
T Consensus         8 IIv~V~vg~~iiii~~~~YaCcykk~~   34 (38)
T PF02439_consen    8 IIVAVVVGMAIIIICMFYYACCYKKHR   34 (38)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence            444444555566566666554444433

This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	293
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	1e-18
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	1e-13

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	293
3a2e_A	108	Ginkbilobin-2; domain 26 unknown function (DUF26),	99.94
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	99.94
3a2e_A	108	Ginkbilobin-2; domain 26 unknown function (DUF26),	99.91
2e79_A	108	Ginkbilobin-2; DUF26 fold, C-X8-C-X2-C motif, lect	99.9
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	95.84
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	95.47
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	95.46
2k1k_A	38	Ephrin type-A receptor 1; EPHA1, receptor tyrosine	93.46

>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba}

Probab=99.94  E-value=7.1e-27  Score=183.66  Aligned_cols=101  Identities=30%  Similarity=0.547  Sum_probs=89.0

Q ss_pred             ccccccccccCcccCCCh--HHHHHHHHHHhhhccCCC--CceeeecC-CCCCcEEEEEEcCCCCChhhhHHHHHHhHHh
Q 022735           30 TTLVYKGCAKQFFQDPVS--SQALSALFGSLVSQSTKT--KFFKTSSG-TGQASISGLFQCRGDLSNSDCYNCVSKLPTL  104 (293)
Q Consensus        30 ~~~~~~~C~~~~~~~~ns--~~NL~~ll~~L~s~~~~~--~f~~~s~G-~~pd~vygl~~CrgD~~~~~C~~Cv~~a~~~  104 (293)
                      +.++++.|+++ ++++++  ++||+.||++|+++++..  +|++...| .++|+||||+|||+|+++++|+.||+.|+.+
T Consensus         3 t~~v~~~Cn~~-~~t~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~   81 (108)
T 3a2e_A            3 TAFVSSACNTQ-KIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNR   81 (108)
T ss_dssp             CCEEEEEECSS-BCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHTT
T ss_pred             cceeeeecCCC-ccCCCChHHHHHHHHHHHHHhhCccccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            67899999765 455676  999999999999987643  35565555 4569999999999999999999999999999


Q ss_pred             hhhhcCCCcceEEEccceEEEEeeccc
Q 022735          105 SDKQCGKTISARVQLLGCYMLYEVSGF  131 (293)
Q Consensus       105 ~~~~C~~~~~a~i~~d~C~lRYsn~~f  131 (293)
                      +.+.||++++|++|+|.|+||||+++|
T Consensus        82 ~~~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           82 IFSICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             HHHHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHHHCCCCceEEEECCCEEEEEeCCcC
Confidence            999999999999999999999999987

>3a2e_A Ginkbilobin-2; domain 26 unknown function (DUF26), C-X8-C-X2-C motif, antifungal protein, embryo-abundant protein (EAP), plant protein; 2.38A {Ginkgo biloba}

Probab=99.91  E-value=2.3e-24  Score=169.30  Aligned_cols=99  Identities=23%  Similarity=0.478  Sum_probs=84.1

Q ss_pred             cccceeecCCCcc-CCchHHHHHHHHHHHHhhccccCC-ccccc-----cCCeEEEEEEcCCCCChhhHHHHHHHHHHHH
Q 022735          137 LEMLFKTCGSTNV-AGSGFEERRDAALQAMENGVVSGH-GFYTT-----SYQSVFLLAQCEGDLGDSDCGDCVKGAVQRA  209 (293)
Q Consensus       137 ~~~~~~~~~~~~~-~~~~f~~~~~~~~~~l~~~~~~~~-~f~~~-----~~~~vYgLaQCt~DLs~~~C~~CL~~a~~~i  209 (293)
                      +..+++.|+..++ .++.|+.+++.++..|...++.+. .|++.     +.++||||+||+||+++++|+.||+.++.++
T Consensus         3 t~~v~~~Cn~~~~t~~s~f~~nl~~ll~~L~~~a~~s~~~~~t~~~~~~~~~~vygl~qC~~Dls~~~C~~Cl~~a~~~~   82 (108)
T 3a2e_A            3 TAFVSSACNTQKIPSGSPFNRNLRAMLADLRQNTAFSGYDYKTSRAGSGGAPTAYGRATCKQSISQSDCTACLSNLVNRI   82 (108)
T ss_dssp             CCEEEEEECSSBCCTTCTHHHHHHHHHHHHHHHGGGTTSEEEEEECCSTTCCCEEEEEEECTTSCHHHHHHHHHHHHTTH
T ss_pred             cceeeeecCCCccCCCChHHHHHHHHHHHHHhhCccccCCceEeeccCCCCceEEEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence            3456678987777 467899999999999987654332 34332     3478999999999999999999999999999


Q ss_pred             hhhCCCCccEEEEcCeeEEEEecCCC
Q 022735          210 QVECGSSISGQVYLHKCFISYSYYPN  235 (293)
Q Consensus       210 ~~~C~~~~ggrv~~~~C~lRYe~y~f  235 (293)
                      +++|++++||+||+++|+||||+|+|
T Consensus        83 ~~~C~~~~g~~i~~~~C~lRY~~~~F  108 (108)
T 3a2e_A           83 FSICNNAIGARVQLVDCFIQYEQRSF  108 (108)
T ss_dssp             HHHTTSBSSEEEEETTEEEEEESSCC
T ss_pred             HHHCCCCceEEEECCCEEEEEeCCcC
Confidence            99999999999999999999999998

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=95.84  E-value=0.0031  Score=40.46  Aligned_cols=29  Identities=14%  Similarity=-0.019  Sum_probs=13.4

Q ss_pred             cEEEEeehHHHHH-HHHHHHHHHHHHhhhc
Q 022735          261 KTVAIILGGAAGV-GFVVICLLFARNLVKK  289 (293)
Q Consensus       261 ~iiaivv~~v~~~-~~~~~~~~~~rr~~kk  289 (293)
                      .|.+-||+.++++ ++++..++++|||++|
T Consensus        12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~   41 (44)
T 2ks1_B           12 SIATGMVGALLLLLVVALGIGLFMRRRHIV   41 (44)
T ss_dssp             SSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred             eEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence            3444455544444 3333344555555544

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=95.47  E-value=0.0035  Score=40.15  Aligned_cols=32  Identities=19%  Similarity=0.137  Sum_probs=14.8

Q ss_pred             CCCcEEEEeehHHHHHHH-HHHHHHHHHHhhhc
Q 022735          258 NTGKTVAIILGGAAGVGF-VVICLLFARNLVKK  289 (293)
Q Consensus       258 ~~~~iiaivv~~v~~~~~-~~~~~~~~rr~~kk  289 (293)
                      +++.|.+-||+.++++++ ++..++++|||+++
T Consensus         8 ~~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~   40 (44)
T 2l2t_A            8 RTPLIAAGVIGGLFILVIVGLTFAVYVRRKSIK   40 (44)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred             CcceEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence            333444555554444433 33344555555444

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=95.46  E-value=0.0031  Score=40.34  Aligned_cols=28  Identities=14%  Similarity=0.147  Sum_probs=12.6

Q ss_pred             EEEEeehHHHHHHHHHHHHHHHHHhhhc
Q 022735          262 TVAIILGGAAGVGFVVICLLFARNLVKK  289 (293)
Q Consensus       262 iiaivv~~v~~~~~~~~~~~~~rr~~kk  289 (293)
                      |+++||++++++++.+..++++|||+.|
T Consensus        14 Ia~~vVGvll~vi~~l~~~~~~RRR~~~   41 (44)
T 2jwa_A           14 IISAVVGILLVVVLGVVFGILIKRRQQK   41 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred             hHHHHHHHHHHHHHHHHHHhheehhhhh
Confidence            5666777433333333333344444433

>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A

Probab=93.46  E-value=0.0093  Score=37.02  Aligned_cols=29  Identities=28%  Similarity=0.414  Sum_probs=17.4

Q ss_pred             CCCCcEEEEeehHHHHHHHH-HHHHHHHHH
Q 022735          257 PNTGKTVAIILGGAAGVGFV-VICLLFARN  285 (293)
Q Consensus       257 ~~~~~iiaivv~~v~~~~~~-~~~~~~~rr  285 (293)
                      -+.+.|..||+++++.++++ .+.+++|||
T Consensus         8 ls~GaIAGiVvG~v~gv~li~~l~~~~~rr   37 (38)
T 2k1k_A            8 LTGGEIVAVIFGLLLGAALLLGILVFRSRR   37 (38)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             CCCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence            34556778888877766444 344445544

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00