Citrus Sinensis ID: 022751
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 292 | ||||||
| 359479459 | 422 | PREDICTED: uncharacterized protein LOC10 | 0.866 | 0.599 | 0.841 | 1e-126 | |
| 325461580 | 430 | putative astaxanthin synthase [Carica pa | 0.866 | 0.588 | 0.849 | 1e-126 | |
| 449444893 | 416 | PREDICTED: uncharacterized protein LOC10 | 0.866 | 0.608 | 0.845 | 1e-125 | |
| 255544942 | 422 | conserved hypothetical protein [Ricinus | 0.866 | 0.599 | 0.830 | 1e-124 | |
| 224106217 | 431 | predicted protein [Populus trichocarpa] | 0.866 | 0.587 | 0.822 | 1e-124 | |
| 164521187 | 396 | unknown, partial [Nuphar advena] | 0.866 | 0.638 | 0.814 | 1e-120 | |
| 357474051 | 420 | Saccharopine dehydrogenase family protei | 0.863 | 0.6 | 0.803 | 1e-120 | |
| 356543827 | 429 | PREDICTED: uncharacterized protein LOC10 | 0.863 | 0.587 | 0.818 | 1e-119 | |
| 356538501 | 429 | PREDICTED: uncharacterized protein LOC10 | 0.863 | 0.587 | 0.786 | 1e-116 | |
| 18403077 | 428 | Saccharopine dehydrogenase [Arabidopsis | 0.828 | 0.565 | 0.785 | 1e-113 |
| >gi|359479459|ref|XP_002274681.2| PREDICTED: uncharacterized protein LOC100251769 [Vitis vinifera] gi|297734956|emb|CBI17190.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/253 (84%), Positives = 238/253 (94%)
Query: 40 TVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGPTILATSFLLLGEEVVAYNKGEEIT 99
VMAAELVRVAR+ES+G+PERLRF YYTAGTGGAGPTILATSFLLLGEEVVAYNKGE+I
Sbjct: 170 NVMAAELVRVARSESQGKPERLRFYYYTAGTGGAGPTILATSFLLLGEEVVAYNKGEKIK 229
Query: 100 LEPYSGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLGVPTVSARFGTAPFFWNWGMVTMQ 159
L+PYSGML++DFGKGIG++DV+LL+LPEVRSA E+LGVPTVSARFGTAPFFWNWGM M
Sbjct: 230 LKPYSGMLNIDFGKGIGKRDVYLLHLPEVRSAHEILGVPTVSARFGTAPFFWNWGMEAMT 289
Query: 160 RLFPAEYLRDRSKVQQLVQLFDPVVRAFDGIAGERVSMRVDLECTDGRNTVGIFSHRRLS 219
L P E+LRDRSKVQ+LVQLFDP+VRA DGIAGERVSMRVDLEC+DGRNTVG+FSHRRLS
Sbjct: 290 NLLPVEFLRDRSKVQELVQLFDPIVRAMDGIAGERVSMRVDLECSDGRNTVGLFSHRRLS 349
Query: 220 VSVGTAIAAFVLAVLEGATQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVMNKAPWMV 279
VSVG A AAF LAVLEG+TQPGVWFPEEPEGIAI+AR++LLKRA+QGTINF+MNK PWMV
Sbjct: 350 VSVGFATAAFALAVLEGSTQPGVWFPEEPEGIAIDARDILLKRAAQGTINFIMNKPPWMV 409
Query: 280 ETEPKELGLGIYI 292
ET+PKELGLGIY+
Sbjct: 410 ETDPKELGLGIYV 422
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|325461580|gb|ADZ14892.1| putative astaxanthin synthase [Carica papaya] | Back alignment and taxonomy information |
|---|
| >gi|449444893|ref|XP_004140208.1| PREDICTED: uncharacterized protein LOC101209190 [Cucumis sativus] gi|449482525|ref|XP_004156312.1| PREDICTED: uncharacterized LOC101209190 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|255544942|ref|XP_002513532.1| conserved hypothetical protein [Ricinus communis] gi|223547440|gb|EEF48935.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224106217|ref|XP_002314088.1| predicted protein [Populus trichocarpa] gi|222850496|gb|EEE88043.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|164521187|gb|ABY60455.1| unknown, partial [Nuphar advena] | Back alignment and taxonomy information |
|---|
| >gi|357474051|ref|XP_003607310.1| Saccharopine dehydrogenase family protein expressed [Medicago truncatula] gi|355508365|gb|AES89507.1| Saccharopine dehydrogenase family protein expressed [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|356543827|ref|XP_003540361.1| PREDICTED: uncharacterized protein LOC100781532 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356538501|ref|XP_003537742.1| PREDICTED: uncharacterized protein LOC100811957 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|18403077|ref|NP_564570.1| Saccharopine dehydrogenase [Arabidopsis thaliana] gi|14517416|gb|AAK62598.1| At1g50450/F11F12_20 [Arabidopsis thaliana] gi|20453277|gb|AAM19877.1| At1g50450/F11F12_20 [Arabidopsis thaliana] gi|332194431|gb|AEE32552.1| Saccharopine dehydrogenase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 292 | ||||||
| TAIR|locus:2008041 | 428 | AT1G50450 [Arabidopsis thalian | 0.863 | 0.588 | 0.742 | 7.9e-101 |
| TAIR|locus:2008041 AT1G50450 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1000 (357.1 bits), Expect = 7.9e-101, P = 7.9e-101
Identities = 187/252 (74%), Positives = 217/252 (86%)
Query: 41 VMAAELVRVARNESKGEPERLRFSXXXXXXXXXXPTILATSFLLLGEEVVAYNKGEEITL 100
VMAAE+V AR+E KG+PE+LRFS PTILATSFLLLGEEV AY +GE++ L
Sbjct: 177 VMAAEMVAAARSEDKGKPEKLRFSYYTAGTGGAGPTILATSFLLLGEEVTAYKQGEKVKL 236
Query: 101 EPYSGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLGVPTVSARFGTAPFFWNWGMVTMQR 160
PYSGM++VDFGKGI ++DV+LLNLPEVRS EVLGVPTV ARFGTAPFFWNWGM M +
Sbjct: 237 RPYSGMITVDFGKGIRKRDVYLLNLPEVRSTHEVLGVPTVVARFGTAPFFWNWGMEIMTK 296
Query: 161 LFPAEYLRDRSKVQQLVQLFDPVVRAFDGIAGERVSMRVDLECTDGRNTVGIFSHRRLSV 220
L P+E LRDR+KVQQ+V+LFDPVVRA DG AGERVSMRVDLEC+DGR TVG+FSH++LSV
Sbjct: 297 LLPSEVLRDRTKVQQMVELFDPVVRAMDGFAGERVSMRVDLECSDGRTTVGLFSHKKLSV 356
Query: 221 SVGTAIAAFVLAVLEGATQPGVWFPEEPEGIAIEAREVLLKRASQGTINFVMNKAPWMVE 280
SVG + AAFV A+LEG+TQPGVWFPEEP+GIA+EAREVLLKRASQGT NF++NK PWMVE
Sbjct: 357 SVGVSTAAFVAAMLEGSTQPGVWFPEEPQGIAVEAREVLLKRASQGTFNFILNKPPWMVE 416
Query: 281 TEPKELGLGIYI 292
TEPKE+ LGIY+
Sbjct: 417 TEPKEVVLGIYV 428
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.140 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 292 282 0.00083 115 3 11 22 0.44 33
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 601 (64 KB)
Total size of DFA: 183 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.67u 0.10s 20.77t Elapsed: 00:00:03
Total cpu time: 20.67u 0.10s 20.77t Elapsed: 00:00:03
Start: Mon May 20 16:21:23 2013 End: Mon May 20 16:21:26 2013
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| gw1.IX.3638.1 | hypothetical protein (399 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
| gw1.V.3086.1 | • | • | 0.459 | ||||||||
| gw1.XIII.1190.1 | • | • | 0.421 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 292 | |||
| pfam03435 | 380 | pfam03435, Saccharop_dh, Saccharopine dehydrogenas | 3e-05 |
| >gnl|CDD|217556 pfam03435, Saccharop_dh, Saccharopine dehydrogenase | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 29/175 (16%), Positives = 51/175 (29%), Gaps = 24/175 (13%)
Query: 95 GEEITLEPYSGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLGVPTVSARFG-TAPFFWNW 153
G+ + + S ++ F GIG + + L + V + +
Sbjct: 189 GKWVEVGWGSHERTIPFPYGIGPGYAYEIYLNRPGTLTRVRSWLPEADGVLFGTIRIPGY 248
Query: 154 GMVTMQRLFPAEYLRD------RSKVQQLVQLFDPVVRAFDGIAGERVSMRVDLE--CTD 205
V ++ L LR + L L + +V + V++E
Sbjct: 249 LTV-IKLLGDLGLLRPTVHYAYIPPLDALKSLLESPASLGPEEQD-KVRIGVEVEGIDKL 306
Query: 206 GRNTVGIFSH-----------RRL-SVSVGTAIAAFVLAVLEGA-TQPGVWFPEE 247
G G + R + GT + G +PGV PEE
Sbjct: 307 GVLLTGHIYNAYGSGLSIEEGRSAMPYTTGTPAQVAAALLAGGEWAKPGVVEPEE 361
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This family comprised of three structural domains that can not be separated in the linear sequence. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase. Length = 380 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 292 | |||
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 99.95 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 99.85 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 99.33 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 98.69 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 93.08 |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.8e-28 Score=228.42 Aligned_cols=227 Identities=18% Similarity=0.159 Sum_probs=182.9
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcchhhhhHHHHHHHHhhcCCCCCceeEEEEEecCCCCCC------ch--hhhhhhhhcc
Q 022751 15 FLRSEKLYLLLCCFWILILTDICYMTVMAAELVRVARNESKGEPERLRFSYYTAGTGGAG------PT--ILATSFLLLG 86 (292)
Q Consensus 15 ~~~~~~~~~~~~~g~~~~g~~PGlSn~lA~~aa~~l~~~~~~~ve~Idi~~~~~g~g~~G------~~--~~~~~l~~l~ 86 (292)
|.+++.+...++++...+|++||+||++|++++++++ |++++|||++ .+.++++ .. ++|++|.++.
T Consensus 106 ~~~~~~a~~Agit~v~~~G~dPGi~nv~a~~a~~~~~----~~i~si~iy~--g~~g~~~~~~l~ya~tws~e~~l~e~~ 179 (389)
T COG1748 106 WKLDEEAKKAGITAVLGCGFDPGITNVLAAYAAKELF----DEIESIDIYV--GGLGEHGDNPLGYATTWSPEINLREYT 179 (389)
T ss_pred hhhhHHHHHcCeEEEcccCcCcchHHHHHHHHHHHhh----ccccEEEEEE--ecCCCCCCCCccceeeecHHHhHHHhc
Confidence 7777777777777777788899999999999996554 6999999998 4555555 33 7899999999
Q ss_pred ceeeeeccCceEEeecCCceeeeecCCCCCcceeEeecCccccccccccc-cceeeeeccCC-ccchhhhHHHhhhcCch
Q 022751 87 EEVVAYNKGEEITLEPYSGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLG-VPTVSARFGTA-PFFWNWGMVTMQRLFPA 164 (292)
Q Consensus 87 ~p~~v~~dGr~~~v~~~s~~r~vdFp~~~G~r~~~~~~~pD~~Tlp~~~g-i~~V~~~~g~~-~~~~~~ll~~l~~lg~~ 164 (292)
.|+.+|+||+|++++|+++.+.++||. +|...+|.++|+|+.||.++++ +.++++|++|. +.++++ +++|+.+|
T Consensus 180 ~p~~~~~~Gk~~~v~~~~~~~~~~~~~-~G~~~~y~~~~~el~sL~~~i~~~~~~~~~~t~r~~g~~~~-i~~L~~lG-- 255 (389)
T COG1748 180 RPARYWENGKWVEVDPLEEREVFEFPV-IGYGDVYAFYHDELRSLVKTIPGVVRTRFEMTFRYPGHLEV-IKALRDLG-- 255 (389)
T ss_pred CceEEEeCCEEEEecCcccccccccCC-CCceeEEecCCccHHHHHHhCcccceeeEEeecCcccHHHH-HHHHHHcC--
Confidence 999999999999999999999999996 7999999999999999999997 78899999999 888887 57888886
Q ss_pred hhccchh--------hHHHHHHhhhhhhhhhcccccceeeeeeeeee-cCCCceeee---ee---------eeeeeEeeh
Q 022751 165 EYLRDRS--------KVQQLVQLFDPVVRAFDGIAGERVSMRVDLEC-TDGRNTVGI---FS---------HRRLSVSVG 223 (292)
Q Consensus 165 ~LL~~~~--------~~~~la~l~~~l~~~~~~~~g~~~~m~v~v~g-~~G~~~~~~---~~---------~~~~~~~Tg 223 (292)
+++.++ +.++++++........+.+ .+-+.|.+.|+| |||+....+ ++ +..++++||
T Consensus 256 -ll~~~~v~~~~~i~p~eflk~vl~~~~s~~~~~-~d~t~i~v~v~G~kdG~~~~~~y~~~~~~~~~~~~~~~ais~ttg 333 (389)
T COG1748 256 -LLSREPVKVQQEIVPLEFLKAVLPDPLSLAPDY-KDVTVIGVEVKGTKDGRDKTVFYNVKDHAEAYSEVGSSAISYTTG 333 (389)
T ss_pred -CCcccccccccccchHHHHHHhcccccccCCCc-CceEEEEEEEEEEEcCeeeEEEecchhhHHHhhccccceeehhcc
Confidence 665542 2455655443332222222 444579999995 588877332 22 335789999
Q ss_pred hHHHHHHHHHHhCC-CCCcccccCCCCccch
Q 022751 224 TAIAAFVLAVLEGA-TQPGVWFPEEPEGIAI 253 (292)
Q Consensus 224 ~~aa~~A~~ll~G~-~~~Gv~~PE~~~g~~~ 253 (292)
.+|++.|+.|+.|+ ..+||++||++...+-
T Consensus 334 ~pa~~~a~ll~~g~~~~~Gv~~~E~l~~~~~ 364 (389)
T COG1748 334 VPAAIGAELLAEGEWETPGVVNPEELGPDPF 364 (389)
T ss_pred ccHHHHHHHHHcCCCCcCcEecHHHhCCChh
Confidence 99999999999999 8999999999996663
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| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 292 | |||
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 1e-04 |
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 292 | |||
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 99.95 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 99.88 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 99.8 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 99.29 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 99.2 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 98.85 |
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.4e-28 Score=232.35 Aligned_cols=208 Identities=18% Similarity=0.183 Sum_probs=165.8
Q ss_pred HHHhhhcchhhhhHHHHHHHHhhcCCCCCceeEEEEEecCCCCCCc-----hhhhhhhhhccceeeeeccCceEEeecCC
Q 022751 30 ILILTDICYMTVMAAELVRVARNESKGEPERLRFSYYTAGTGGAGP-----TILATSFLLLGEEVVAYNKGEEITLEPYS 104 (292)
Q Consensus 30 ~~~g~~PGlSn~lA~~aa~~l~~~~~~~ve~Idi~~~~~g~g~~G~-----~~~~~~l~~l~~p~~v~~dGr~~~v~~~s 104 (292)
.++|++||++|++++++++ +.++++++|+|+.+.++ +.|. -++++++++++.|+.+|+||+|+++|+++
T Consensus 138 ~g~G~~PG~~~l~a~~~~~----~~~~~i~~i~i~~~~gg--~~g~~~~~~~sp~~~~~~~~~~~~~~~~G~~~~~~~~~ 211 (405)
T 4ina_A 138 LGSGFDPGVTNVFCAYAQK----HYFDEIHEIDILDCNAG--DHGYPFATNFNPEINLREVSSKGRYWENGEWIETEPME 211 (405)
T ss_dssp ECCBTTTBHHHHHHHHHHH----HTCSEEEEEEEEEEECC--BCSSSSCCSSCHHHHHHHTTSCEEEEETTEEEEESTTC
T ss_pred EcCCCCccHHHHHHHHHHH----hccCcccEEEEEEecCC--CCCccceeeeCHHHHHHHhcCCcEEEECCEEEEecCCc
Confidence 3455799999999999994 35679999999874433 3332 24678889999999999999999999999
Q ss_pred ceeeeecCCCCCcceeEeecCccccccccccc-cceeeeeccCCccchhhhHHHhhhcCchhhccchh---------hHH
Q 022751 105 GMLSVDFGKGIGRKDVFLLNLPEVRSAREVLG-VPTVSARFGTAPFFWNWGMVTMQRLFPAEYLRDRS---------KVQ 174 (292)
Q Consensus 105 ~~r~vdFp~~~G~r~~~~~~~pD~~Tlp~~~g-i~~V~~~~g~~~~~~~~ll~~l~~lg~~~LL~~~~---------~~~ 174 (292)
+.+.++||. +|++.+|+++|||+.|++++++ +++|+||++|.+.+.+. +++|+++| |++..+ +.+
T Consensus 212 ~~~~~~fp~-~G~~~~y~~~~~e~~tl~~~~~~~~~v~~~~~~~~~~~~~-~~~L~~lG---l~~~~~v~~~g~~v~p~~ 286 (405)
T 4ina_A 212 IMQVWDYPE-VGPKDSYLLYHEELESLVRNIKGLKRIRFFMTFGQSYLTH-MRCLENVG---MLRIDEIEVNGCKVVPIQ 286 (405)
T ss_dssp CEEEEEETT-TEEEEEEEECCTHHHHHHHHSTTCCEEEEEEECCHHHHHH-HHHHHHHT---TTCCSCEEETTEEECHHH
T ss_pred eeEEEECCC-CceeeEEEeCCCcHHHHHhhCCCcceEEeecccCHHHHHH-HHHHHHcC---CCCCCceeeCCceecHHH
Confidence 999999996 9999999999999999999996 79999999999999987 46778886 555332 345
Q ss_pred HHHHhhhhhhhhhcccccceeeeeeeeee-cCCCce----eeeeeeee---------eeEeehhHHHHHHHHHHhCC-CC
Q 022751 175 QLVQLFDPVVRAFDGIAGERVSMRVDLEC-TDGRNT----VGIFSHRR---------LSVSVGTAIAAFVLAVLEGA-TQ 239 (292)
Q Consensus 175 ~la~l~~~l~~~~~~~~g~~~~m~v~v~g-~~G~~~----~~~~~~~~---------~~~~Tg~~aa~~A~~ll~G~-~~ 239 (292)
+|+.+......+.+. ..+...|++.++| +||++. +.+++|.+ ++++||.|++++|+++++|+ ..
T Consensus 287 ~l~~~l~~~~~~~~~-~~d~~~i~~~v~g~~~G~~~~~~~~~~~~~~~~~~~~~~~a~~~ttg~p~~i~a~li~~G~~~~ 365 (405)
T 4ina_A 287 VLKALLPDPASLASR-TKGKTNIGCYIKGIKEGKARTIYIYNVCDHESCYREVNAQAISYTTGVPAMIGAKLMLEGKWSG 365 (405)
T ss_dssp HHHHHSCCHHHHTTT-CBSEEEEEEEEEEEETTEEEEEEEEEEEEHHHHHHHHSSCHHHHHHHHHHHHHHHHHHTTSSCC
T ss_pred HHHHhcchhhccCCC-CCCeEEEEEEEEEEECCeEEEEEEEEEeccccccccccceEEEeccChhHHHHHHHHhCCccCC
Confidence 666544333233333 3455679999995 689866 34566543 68999999999999999999 89
Q ss_pred CcccccCCCC
Q 022751 240 PGVWFPEEPE 249 (292)
Q Consensus 240 ~Gv~~PE~~~ 249 (292)
+||+.||+++
T Consensus 366 ~Gv~~~e~~~ 375 (405)
T 4ina_A 366 KGVFNMEELD 375 (405)
T ss_dssp SEEEEGGGSC
T ss_pred CceecccccC
Confidence 9999999975
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| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 292 | |||
| d1e5qa2 | 267 | Saccharopine reductase {Rice blast fungus (Magnapo | 96.37 |
| >d1e5qa2 d.81.1.2 (A:125-391) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: FwdE/GAPDH domain-like superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain family: Homoserine dehydrogenase-like domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.37 E-value=0.0022 Score=55.50 Aligned_cols=121 Identities=8% Similarity=-0.049 Sum_probs=76.2
Q ss_pred hcchhhhhHHHHHHHHhhcCCCCCceeEEEEEecCCCCC-Cc---------hhhhhhhhhccceeeeeccCceEEeecC-
Q 022751 35 DICYMTVMAAELVRVARNESKGEPERLRFSYYTAGTGGA-GP---------TILATSFLLLGEEVVAYNKGEEITLEPY- 103 (292)
Q Consensus 35 ~PGlSn~lA~~aa~~l~~~~~~~ve~Idi~~~~~g~g~~-G~---------~~~~~~l~~l~~p~~v~~dGr~~~v~~~- 103 (292)
|||+.+++|..+.+++. +.-..|+++..+. +|.-.. .+ =+++-++.....|+.+.+||+.++|++.
T Consensus 2 dPGidhm~A~~~i~~~~-~~~g~i~~f~s~c--GGLp~p~~~~np~~YkfsWsp~gvi~~~~~~A~~~~~G~~~~v~~~~ 78 (267)
T d1e5qa2 2 DPGIDHLYAIKTIEEVH-AAGGKIKTFLSYC--GGLPAPESSDNPLGYKFSWSSRGVLLALRNAASFYKDGKVTNVAGPE 78 (267)
T ss_dssp TTBHHHHHHHHHHHHHH-HTTCEEEEEEEEE--EEEECGGGCCSTTSCCBSSCHHHHHHHTTCCEEEEETTEEEEECGGG
T ss_pred CCcHHHHHHHHHHHHHH-hcCCcEEEEEEEe--cCccCCCCCCCCccceEEeccchhHHHhcCcceeeeCCeEEEECCHH
Confidence 89999999999999886 4434677777764 554211 11 1567778888899999999999999994
Q ss_pred --CceeeeecCCCCCcceeEeecCccccccccccc---cceeeeeccCCccchhhhHHHhhhcC
Q 022751 104 --SGMLSVDFGKGIGRKDVFLLNLPEVRSAREVLG---VPTVSARFGTAPFFWNWGMVTMQRLF 162 (292)
Q Consensus 104 --s~~r~vdFp~~~G~r~~~~~~~pD~~Tlp~~~g---i~~V~~~~g~~~~~~~~ll~~l~~lg 162 (292)
...+.++|.+ .+.-.+|. ..|-...-..++ |+++.-+.--.+.+... +..++.+|
T Consensus 79 ~~~~~~~~~~~~-~~~~E~~p--nrdsl~y~~~y~~~~i~t~~rgTLRy~G~~~~-~~~l~~lG 138 (267)
T d1e5qa2 79 LMATAKPYFIYP-GFAFVAYP--NRDSTPYKERYQIPEADNIVRGTLRYQGFPQF-IKVLVDIG 138 (267)
T ss_dssp SGGGCEECCSST-TBCEEEEE--CSBCTTHHHHTTCTTCSEEEEEEEEETTHHHH-HHHHHHTT
T ss_pred hhhhceeeeccC-CcceEEEe--cCCCcchhhhhcCcchhhhhhhhhcccchHHH-HHHHHHHH
Confidence 4455677764 45555543 335443333334 44433232234555544 34555664
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