Citrus Sinensis ID: 022812
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 291 | ||||||
| 297734310 | 307 | unnamed protein product [Vitis vinifera] | 1.0 | 0.947 | 0.852 | 1e-144 | |
| 359491022 | 291 | PREDICTED: uncharacterized protein LOC10 | 0.996 | 0.996 | 0.852 | 1e-143 | |
| 449439449 | 300 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 0.97 | 0.811 | 1e-134 | |
| 224133212 | 292 | predicted protein [Populus trichocarpa] | 1.0 | 0.996 | 0.842 | 1e-133 | |
| 255583469 | 310 | conserved hypothetical protein [Ricinus | 1.0 | 0.938 | 0.808 | 1e-131 | |
| 357118017 | 293 | PREDICTED: uncharacterized protein LOC10 | 0.989 | 0.982 | 0.789 | 1e-131 | |
| 259490034 | 291 | uncharacterized protein LOC100304216 [Ze | 0.965 | 0.965 | 0.801 | 1e-130 | |
| 363807524 | 290 | uncharacterized protein LOC100780288 [Gl | 0.986 | 0.989 | 0.781 | 1e-130 | |
| 413933316 | 293 | putative domain of unknown function (DUF | 0.965 | 0.959 | 0.801 | 1e-130 | |
| 115454871 | 291 | Os03g0708400 [Oryza sativa Japonica Grou | 0.989 | 0.989 | 0.803 | 1e-129 |
| >gi|297734310|emb|CBI15557.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 249/292 (85%), Positives = 268/292 (91%), Gaps = 1/292 (0%)
Query: 1 MGTVIDSHFLALTAIVTVGYQLLFFVITALFKFDKVTDFAGSTNFIIIALLTLILKGSWH 60
MGTVIDSHFLALTAIVTVGYQ LFF+ITAL KFDKVTDFAGSTNF+I+A+LTL+LKG+WH
Sbjct: 1 MGTVIDSHFLALTAIVTVGYQFLFFIITALLKFDKVTDFAGSTNFVILAVLTLVLKGTWH 60
Query: 61 FRQVVLTFLAVVWGLRLALFLLMRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSL 120
FRQVVLT L V+WGLRL +FLLMRIL WGEDRRFDEMRSNLGKLA+FW FQAVWVWTVSL
Sbjct: 61 FRQVVLTLLVVIWGLRLGIFLLMRILQWGEDRRFDEMRSNLGKLAVFWTFQAVWVWTVSL 120
Query: 121 PVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKY 180
PVT+VNAS RDPS+QA D+IGWIMWSVG++IEA ADQQKLSFKNSPENRGKWCNVG WKY
Sbjct: 121 PVTIVNASGRDPSLQAADIIGWIMWSVGITIEASADQQKLSFKNSPENRGKWCNVGVWKY 180
Query: 181 SRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFG 240
+RHPNYFGEI LWWGIFVASTPVL+GAEWLVILGPIFLTLLLLF+SGIPLLEESADKKFG
Sbjct: 181 TRHPNYFGEILLWWGIFVASTPVLEGAEWLVILGPIFLTLLLLFVSGIPLLEESADKKFG 240
Query: 241 NMPAYRLYKKTTSPLIPLPPVVYGNLPWWLK-TILFELPLYSRNFPQEGPNW 291
N+ YRLYK TTSPL+PLPPVVYGNLP W K T L E P YSRN PQEG NW
Sbjct: 241 NVAGYRLYKSTTSPLVPLPPVVYGNLPSWFKTTFLLEFPFYSRNLPQEGQNW 292
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359491022|ref|XP_003634205.1| PREDICTED: uncharacterized protein LOC100853969 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449439449|ref|XP_004137498.1| PREDICTED: uncharacterized protein LOC101219154 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|224133212|ref|XP_002321511.1| predicted protein [Populus trichocarpa] gi|222868507|gb|EEF05638.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255583469|ref|XP_002532493.1| conserved hypothetical protein [Ricinus communis] gi|223527792|gb|EEF29892.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|357118017|ref|XP_003560756.1| PREDICTED: uncharacterized protein LOC100830682 [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
| >gi|259490034|ref|NP_001159138.1| uncharacterized protein LOC100304216 [Zea mays] gi|223942193|gb|ACN25180.1| unknown [Zea mays] gi|413933315|gb|AFW67866.1| putative domain of unknown function (DUF1295) containing family protein [Zea mays] | Back alignment and taxonomy information |
|---|
| >gi|363807524|ref|NP_001241888.1| uncharacterized protein LOC100780288 [Glycine max] gi|255636515|gb|ACU18596.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|413933316|gb|AFW67867.1| putative domain of unknown function (DUF1295) containing family protein [Zea mays] | Back alignment and taxonomy information |
|---|
| >gi|115454871|ref|NP_001051036.1| Os03g0708400 [Oryza sativa Japonica Group] gi|13937298|gb|AAK50129.1|AC087797_14 unknown protein [Oryza sativa Japonica Group] gi|108710687|gb|ABF98482.1| expressed protein [Oryza sativa Japonica Group] gi|113549507|dbj|BAF12950.1| Os03g0708400 [Oryza sativa Japonica Group] gi|125545445|gb|EAY91584.1| hypothetical protein OsI_13219 [Oryza sativa Indica Group] gi|125587653|gb|EAZ28317.1| hypothetical protein OsJ_12291 [Oryza sativa Japonica Group] gi|215694680|dbj|BAG89871.1| unnamed protein product [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 291 | ||||||
| TAIR|locus:2027774 | 302 | AT1G73650 [Arabidopsis thalian | 0.989 | 0.953 | 0.671 | 1.8e-103 | |
| TAIR|locus:2194090 | 305 | AT1G18180 [Arabidopsis thalian | 1.0 | 0.954 | 0.650 | 3.3e-102 | |
| FB|FBgn0035914 | 316 | CG6282 [Drosophila melanogaste | 0.951 | 0.876 | 0.415 | 2e-56 | |
| UNIPROTKB|G4N6G0 | 335 | MGG_03731 "Uncharacterized pro | 0.697 | 0.605 | 0.440 | 4.4e-45 | |
| ZFIN|ZDB-GENE-030131-3630 | 288 | si:ch211-210c8.6 "si:ch211-210 | 0.865 | 0.875 | 0.369 | 8.1e-44 | |
| UNIPROTKB|Q74AM9 | 256 | GSU2323 "Uncharacterized prote | 0.831 | 0.945 | 0.310 | 1.5e-28 | |
| TIGR_CMR|GSU_2323 | 256 | GSU_2323 "membrane protein, pu | 0.831 | 0.945 | 0.310 | 1.5e-28 | |
| DICTYBASE|DDB_G0279829 | 267 | DDB_G0279829 "DUF1295 family p | 0.807 | 0.880 | 0.298 | 5.2e-26 | |
| UNIPROTKB|G4NC19 | 328 | MGG_00459 "Uncharacterized pro | 0.498 | 0.442 | 0.337 | 1.4e-22 | |
| UNIPROTKB|Q722V9 | 257 | LMOf2365_0620 "Putative membra | 0.656 | 0.743 | 0.295 | 9e-22 |
| TAIR|locus:2027774 AT1G73650 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1025 (365.9 bits), Expect = 1.8e-103, P = 1.8e-103
Identities = 194/289 (67%), Positives = 215/289 (74%)
Query: 1 MGTVIDSHFLALTAIVTVGYQLLFFVITALFKFDKVTDFAGSTNFIIIALLTLILKGSWH 60
MGTV+DSHFLALTAIVTV YQ +FFVITALFKFD+VTDFAGSTNF+I+A+LTL+LK SWH
Sbjct: 1 MGTVLDSHFLALTAIVTVIYQFIFFVITALFKFDQVTDFAGSTNFVILAVLTLVLKASWH 60
Query: 61 FRQVVLTFLAVVWGXXXXXXXXXXXXNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSL 120
FRQ+VLT L VVWG WGEDRRFDE R N+ +L IFW QAVWVWTVSL
Sbjct: 61 FRQIVLTLLVVVWGLRLGIFLLMRILQWGEDRRFDEQRGNIVRLIIFWTLQAVWVWTVSL 120
Query: 121 PVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKY 180
P+T+VNASD S++ DVIGW MW G IEA ADQQKLSFKNSPENRGKWC+VG WKY
Sbjct: 121 PLTLVNASDGGGSLKPADVIGWTMWVFGFLIEAAADQQKLSFKNSPENRGKWCDVGVWKY 180
Query: 181 SRHPNYFGEIFLWWGIFVASTPVLDGAEWXXXXXXXXXXXXXXXXXXXXXXEESADKKFG 240
SRHPNYFGE+ LWWGIFVA++PVL+GAE+ E SADKK G
Sbjct: 181 SRHPNYFGEMLLWWGIFVAASPVLEGAEYLVIFGPLFLTLLLLFVSGIPLLEASADKKHG 240
Query: 241 NMPAYRLYKKTTSPLIPLPPVVYGNLPWWLKTI-LFELPLYSRNFPQEG 288
N AYR YKKTTSPLI P VYGNLP W KT+ LFE P YSRN PQEG
Sbjct: 241 NSGAYRSYKKTTSPLILFPRGVYGNLPGWFKTVFLFEFPFYSRNLPQEG 289
|
|
| TAIR|locus:2194090 AT1G18180 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0035914 CG6282 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G4N6G0 MGG_03731 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-030131-3630 si:ch211-210c8.6 "si:ch211-210c8.6" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q74AM9 GSU2323 "Uncharacterized protein" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|GSU_2323 GSU_2323 "membrane protein, putative" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0279829 DDB_G0279829 "DUF1295 family protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G4NC19 MGG_00459 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q722V9 LMOf2365_0620 "Putative membrane protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00017810001 | SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (292 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
| GSVIVG00032227001 | • | • | 0.827 | ||||||||
| GSVIVG00020325001 | • | • | 0.720 | ||||||||
| GSVIVG00020324001 | • | • | 0.675 | ||||||||
| GSVIVG00028313001 | • | • | 0.561 | ||||||||
| GSVIVG00000320001 | • | 0.559 | |||||||||
| TIL | • | 0.472 | |||||||||
| GSVIVG00020327001 | • | 0.440 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 291 | |||
| pfam06966 | 235 | pfam06966, DUF1295, Protein of unknown function (D | 5e-98 | |
| COG3752 | 272 | COG3752, COG3752, Steroid 5-alpha reductase family | 1e-41 |
| >gnl|CDD|219244 pfam06966, DUF1295, Protein of unknown function (DUF1295) | Back alignment and domain information |
|---|
Score = 287 bits (736), Expect = 5e-98
Identities = 111/235 (47%), Positives = 153/235 (65%), Gaps = 6/235 (2%)
Query: 24 FFVITALFKFDKVTDFAGSTNFIIIALLTLILKGSWHFRQVVLTFLAVVWGLRLALFLLM 83
F++I+ + D A F+I+A+LT +L R++++T L +WGLRL LL
Sbjct: 1 FWLISRRTGNYGLVDVAWGGGFVILAVLTALLSEGATLRRMLVTLLVTLWGLRLGWHLLR 60
Query: 84 RILNWGEDRRFDEMRSNLGK------LAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAV 137
R WGED R+ ++R N GK L IF+I QAV ++ VSLPV + NAS +P++ A
Sbjct: 61 RTWGWGEDYRYVDLRKNWGKWPYLLSLLIFFILQAVLLYIVSLPVYLANASGPNPALGAW 120
Query: 138 DVIGWIMWSVGVSIEAIADQQKLSFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIF 197
D+IG +W VG+ EA+ADQQ +FK P N+GK C+ G W+YSRHPNYFGE +WWGIF
Sbjct: 121 DIIGIAIWLVGIGFEALADQQLWAFKGDPANKGKVCDTGLWRYSRHPNYFGEALIWWGIF 180
Query: 198 VASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTT 252
+ + VL G EW I GP+ +TLLL+F+SGIPLLE S KK+G+ YR Y++ T
Sbjct: 181 LIAINVLSGLEWWTIAGPLLMTLLLVFVSGIPLLEASMLKKYGDREDYRAYQRRT 235
|
This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long. Length = 235 |
| >gnl|CDD|226275 COG3752, COG3752, Steroid 5-alpha reductase family enzyme [General function prediction only] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 291 | |||
| COG3752 | 272 | Steroid 5-alpha reductase family enzyme [General f | 100.0 | |
| PF06966 | 235 | DUF1295: Protein of unknown function (DUF1295); In | 100.0 | |
| KOG4650 | 311 | consensus Predicted steroid reductase [General fun | 100.0 | |
| PF01222 | 432 | ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 fam | 99.83 | |
| COG2020 | 187 | STE14 Putative protein-S-isoprenylcysteine methylt | 99.75 | |
| KOG1435 | 428 | consensus Sterol reductase/lamin B receptor [Lipid | 99.74 | |
| PF04191 | 106 | PEMT: Phospholipid methyltransferase ; InterPro: I | 99.56 | |
| KOG1638 | 257 | consensus Steroid reductase [Lipid transport and m | 99.47 | |
| KOG2628 | 201 | consensus Farnesyl cysteine-carboxyl methyltransfe | 99.4 | |
| PLN02392 | 260 | probable steroid reductase DET2 | 99.35 | |
| PF02544 | 150 | Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase | 99.29 | |
| PF04140 | 94 | ICMT: Isoprenylcysteine carboxyl methyltransferase | 99.21 | |
| PLN02560 | 308 | enoyl-CoA reductase | 99.12 | |
| PLN03164 | 323 | 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal | 99.01 | |
| COG1755 | 172 | Uncharacterized protein conserved in bacteria [Fun | 98.7 | |
| KOG1640 | 304 | consensus Predicted steroid reductase [Lipid trans | 97.84 | |
| KOG1639 | 297 | consensus Steroid reductase required for elongatio | 97.67 | |
| PF07298 | 191 | NnrU: NnrU protein; InterPro: IPR009915 This famil | 96.68 |
| >COG3752 Steroid 5-alpha reductase family enzyme [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-62 Score=435.75 Aligned_cols=251 Identities=30% Similarity=0.570 Sum_probs=222.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccCeEeecccchHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhHHHHHhhcC
Q 022812 8 HFLALTAIVTVGYQLLFFVITALFKFDKVTDFAGSTNFIIIALLTLILKGSWHFRQVVLTFLAVVWGLRLALFLLMRILN 87 (291)
Q Consensus 8 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~w~~~~~~~a~~~~~~~~~~~~r~~l~~~lv~~W~~RL~~~l~~R~~~ 87 (291)
++....+++.++.+.+.|++|..+||.+++|..||.++++.|+..+..+.+...|+.+++.++++||+||+.|+++|..+
T Consensus 14 ~~~~v~al~~~v~~~~~w~vs~~tg~~~~VD~~Wg~~~~~~a~~~~l~~~~~~~r~~l~~~LvtlWs~RL~~hl~rR~~~ 93 (272)
T COG3752 14 MVIVVVALALAVLFAVAWAVSRRTGNYSWVDAVWGGGFVAVAVVLALLGEGDPRRRWLLLFLVTLWSLRLGWHLYRRTRG 93 (272)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCcceeehhccchHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 44566677778888999999999999999999999999999998887776666799999999999999999999999999
Q ss_pred cCcchhhHHHHHhhhh-------HHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 022812 88 WGEDRRFDEMRSNLGK-------LAIFWIFQAVWVWTVSLPVTVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQKL 160 (291)
Q Consensus 88 ~geD~Ry~~~r~~~~~-------~~~~~~~Q~~~~~l~~lP~~~~~~~~~~~~l~~~~~ig~~l~~~G~~ie~~AD~Ql~ 160 (291)
+|||+||.++|+++++ ++.+|.+|+++.+++++|+++++.. .+.++.+.|++|++++++|+++|+++|.|+.
T Consensus 94 ~geD~RY~~l~~~wg~t~~~~~~l~~vf~lQ~ll~~ilalpi~~a~~~-~~~~~~~~d~~g~~iwivg~~fE~lgD~QL~ 172 (272)
T COG3752 94 KGEDPRYVNLRQRWGKTIYPLKALFIVFGLQALLLFILALPIYLAALN-GPREFGWWDVIGLAIWIVGIVFEALGDAQLW 172 (272)
T ss_pred CCCChHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 9999999999998763 5678899999999999999998765 3557899999999999999999999999999
Q ss_pred hcCCCCCCCCcccccCccccccCcchHHHHHHHHHHHHHhcCccCchhHHHHHHHHHHHHHHHHHhCchHHHHHHHHHcC
Q 022812 161 SFKNSPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKFG 240 (291)
Q Consensus 161 ~f~~~~~~~g~li~~Glw~~sRHPNYfGe~l~w~G~~l~~~~~~~~~~~~~~~~pl~~~~ll~~~sg~~~~E~~~~~kyG 240 (291)
.||++|+||||+|++|+||+|||||||||.++|||+++++++-. ...+++.+|++|+.++.++||+|..||++.|.
T Consensus 173 ~Fk~~P~nkgkll~~GLWr~tRHPNYFgE~l~Wwg~~Lia~~~~--~~~W~~~sPllmt~LL~~vSGvp~l~ekm~k~-- 248 (272)
T COG3752 173 VFKKDPRNKGKLLDTGLWRWTRHPNYFGEALVWWGFYLIAISEW--LLLWAVASPLLMTWLLVHVSGVPPLEEKMLKS-- 248 (272)
T ss_pred HHHhChhhccccccccceecccCcchHHHHHHHHHHHHHHHhhh--hHhhhcccHHHHHHHHHHhcCCChHHHHHhcc--
Confidence 99999999999999999999999999999999999999987422 12346689999999999999999555443332
Q ss_pred CchHHHHHHhhCCcccccCCCCCC
Q 022812 241 NMPAYRLYKKTTSPLIPLPPVVYG 264 (291)
Q Consensus 241 ~~~~Y~~Y~~~t~~fiP~~~~~~~ 264 (291)
+|+|++||+||++|+|++|++..
T Consensus 249 -r~~fr~Yq~rt~~F~P~~~k~~~ 271 (272)
T COG3752 249 -RPGFREYQRRTNAFFPRPPKKAL 271 (272)
T ss_pred -cHhHHHHHHHhcccCCCCCcccC
Confidence 39999999999999999998753
|
|
| >PF06966 DUF1295: Protein of unknown function (DUF1295); InterPro: IPR010721 This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long | Back alignment and domain information |
|---|
| >KOG4650 consensus Predicted steroid reductase [General function prediction only] | Back alignment and domain information |
|---|
| >PF01222 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 family; InterPro: IPR001171 The two fungal enzymes, C-14 sterol reductase (gene ERG24 in budding yeast and erg3 in Neurospora crassa) and C-24(28) sterol reductase (gene ERG4 in budding yeast and sts1 in fission yeast), are involved in ergosterol biosynthesis | Back alignment and domain information |
|---|
| >COG2020 STE14 Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1435 consensus Sterol reductase/lamin B receptor [Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF04191 PEMT: Phospholipid methyltransferase ; InterPro: IPR007318 The Saccharomyces cerevisiae (Baker's yeast) phospholipid methyltransferase (2 | Back alignment and domain information |
|---|
| >KOG1638 consensus Steroid reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG2628 consensus Farnesyl cysteine-carboxyl methyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PLN02392 probable steroid reductase DET2 | Back alignment and domain information |
|---|
| >PF02544 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase ; InterPro: IPR001104 Synonym(s): Steroid 5-alpha-reductase 3-oxo-5-alpha-steroid 4-dehydrogenases, 1 | Back alignment and domain information |
|---|
| >PF04140 ICMT: Isoprenylcysteine carboxyl methyltransferase (ICMT) family ; InterPro: IPR007269 The isoprenylcysteine o-methyltransferase (2 | Back alignment and domain information |
|---|
| >PLN02560 enoyl-CoA reductase | Back alignment and domain information |
|---|
| >PLN03164 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional | Back alignment and domain information |
|---|
| >COG1755 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >KOG1640 consensus Predicted steroid reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG1639 consensus Steroid reductase required for elongation of the very long chain fatty acids [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF07298 NnrU: NnrU protein; InterPro: IPR009915 This family consists of several plant and bacterial NnrU proteins | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 291 | |||
| 4a2n_B | 194 | Isoprenylcysteine carboxyl methyltransferase; memb | 7e-06 |
| >4a2n_B Isoprenylcysteine carboxyl methyltransferase; membrane protein, RAS and RHO gtpases signallin; HET: SAH PLM CDL; 3.40A {Methanosarcina acetivorans} Length = 194 | Back alignment and structure |
|---|
Score = 44.9 bits (106), Expect = 7e-06
Identities = 27/198 (13%), Positives = 59/198 (29%), Gaps = 16/198 (8%)
Query: 63 QVVLTFLAVVWGLRLALFLLMRILNWGEDRRFDEMRSNLGKLAIFWIFQAVWVWTVSLPV 122
++ + ++W ++ + N + + +L L +
Sbjct: 7 KICFIVMFIIWVFVRKVYGTRAMKNKSKKKVRPNFEKSLVFLNFIGMVFLPLTA----VF 62
Query: 123 TVVNASDRDPSVQAVDVIGWIMWSVGVSIEAIADQQ---KLSFKNSPENRGKWCNVGFWK 179
+ S ++ + I+ + + + + S ++ K G +K
Sbjct: 63 SSYLDSFNINLPDSIRLFALIVTFLNIGLFTKIHKDLGNNWSAILEIKDGHKLVKEGIYK 122
Query: 180 YSRHPNYFGEIFLWWGIFVASTPVLDGAEWLVILGPIFLTLLLLFISGIPLLEESADKKF 239
RHP Y + ++I G + +L +P EE ++F
Sbjct: 123 NIRHPMYAHLWLWVITQGIIL-----SNWVVLIFGIVAWAILYFIR--VPKEEELLIEEF 175
Query: 240 GNMPAYRLYKKTTSPLIP 257
G Y Y T L P
Sbjct: 176 G--DEYIEYMGKTGRLFP 191
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 291 | |||
| 4a2n_B | 194 | Isoprenylcysteine carboxyl methyltransferase; memb | 99.93 |
| >4a2n_B Isoprenylcysteine carboxyl methyltransferase; membrane protein, RAS and RHO gtpases signallin; HET: SAH PLM CDL; 3.40A {Methanosarcina acetivorans} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-24 Score=188.09 Aligned_cols=115 Identities=19% Similarity=0.309 Sum_probs=92.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHh-cCC--CCCCCCcccccCccccccCcchHHHHHHHHHHHHHhcCccCchhHHH
Q 022812 135 QAVDVIGWIMWSVGVSIEAIADQQKLS-FKN--SPENRGKWCNVGFWKYSRHPNYFGEIFLWWGIFVASTPVLDGAEWLV 211 (291)
Q Consensus 135 ~~~~~ig~~l~~~G~~ie~~AD~Ql~~-f~~--~~~~~g~li~~Glw~~sRHPNYfGe~l~w~G~~l~~~~~~~~~~~~~ 211 (291)
.+...+|.+++++|+.++..||.|+.+ |+. +++++++++++|+|++||||||+|+++.|+|+++...+ +++
T Consensus 75 ~~~~~~G~~l~l~G~~l~~~a~~~Lg~~f~~~~~~~~~~~Lvt~G~y~~vRHP~Y~G~~l~~~g~~l~~~s------~~~ 148 (194)
T 4a2n_B 75 DSIRLFALIVTFLNIGLFTKIHKDLGNNWSAILEIKDGHKLVKEGIYKNIRHPMYAHLWLWVITQGIILSN------WVV 148 (194)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCSSCCEETTCCCCCSSTTTTBSSHHHHHHHHHHHHHHHHHTC------HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCeeeecCcchhccCccHHHHHHHHHHHHHHhcc------HHH
Confidence 567899999999999999999999855 443 34577889999999999999999999999999887532 333
Q ss_pred HH-HHHHHHHHHHHHhCchHHHHHHHHHcCCchHHHHHHhhCCcccccC
Q 022812 212 IL-GPIFLTLLLLFISGIPLLEESADKKFGNMPAYRLYKKTTSPLIPLP 259 (291)
Q Consensus 212 ~~-~pl~~~~ll~~~sg~~~~E~~~~~kyG~~~~Y~~Y~~~t~~fiP~~ 259 (291)
++ ++++++++ +..+++.||+.+.++|| ++|++|+++|+++||++
T Consensus 149 ~~~~~~~~~~~--~~~ri~~EE~~L~~~fG--~~Y~~Y~~rv~r~iP~i 193 (194)
T 4a2n_B 149 LIFGIVAWAIL--YFIRVPKEEELLIEEFG--DEYIEYMGKTGRLFPKV 193 (194)
T ss_dssp HHHHHHHHHHH--HHHHHHHHHHHHHHHHT--HHHHHHHHHCBSSSCC-
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHhC--HHHHHHHHhCCeeCcee
Confidence 33 33333332 23568999999999999 99999999999999975
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00