Citrus Sinensis ID: 022876

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Protein Sequence
MVSQLYDKTLSFRTPFTPNQKPHKQKRKKSKSSTHRHRHRYRASMAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFGFDPSKSLGAEKDSLDIIQHEWALPKFEQRAETVLKDLVG
Secondary Structure (PSIPRED)
ccHHHHHccccccccccccccccHHHHHHccccccccccHHHHHccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEccccccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHcccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccHHccccccccccccccccHHHHHHHccccccccccccHHHcccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHcHHHHHHHHccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mvsqlydktlsfrtpftpnqkphkqkrkkskssthrhrHRYRASMAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMrssqvpdpkivkEGQVIVRARNLraganfispksfrARRVYFCneengllhvpkgqaqnaqaqmfsdpnmAMDMMKKNLSMIIPQTLTFAWVNFFFSgfvaakipfpltQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSlilgeenatddTQRMMqmsgfgfdpskslgaekdslDIIQHEWALPKFEQRAETVLKDLVG
Flexible Loop (DISEMBL)
mvsqlydktlsfrtpftpnqkphkqkrkkskssthrhrhryrasmaedlVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLmrssqvpdpkivkEGQVIVRARnlraganfispksfrARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFGFDPSKSLGAEKDSLDIIQHEWALPKFEQRAETVLKDLVG
Low Complexity Region (SEG)
MVSQLYDKTLSFRTPFTPNQKPhkqkrkkskssthrhrhryrasMAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFGFDPSKSLGAEKDSLDIIQHEWALPKFEQRAETVLKDLVG
Disordered region (IsUnstruct)
********************************************MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHV************************KNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGE******************************LDIIQHEWALPKF*************
Disordered Region (DISOPRED)
*****YDKTLSFRTP********************************DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKL***************QVIVRARNLRAGANFISPKSFRARRVYFCNEEN***************************MKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGE*************************AEKDSLDIIQHEWALPKFEQRAETVLKDLV*
Disordered Region (DISEMBL)
MVSQLYDKTLSFRTPFT**********************RYRASMAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFGFDPSKSLGAEKDSLDIIQHEWALPKFEQRAETVLKDLVG
Disordered Region (DISPRO)
******DKTLSFRTPFTPNQK**********************SMAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMM***GFGFDPSKSLGAEKDSLDIIQHEWALPKFEQRAETVLKDLVG
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVSQLYDKTLSFRTPFTPNQKPHKQKRKKSKSSTHRHRHRYRASMAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFGFDPSKSLGAEKDSLDIIQHEWALPKFEQRAETVLKDLVG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	290	2.2.26 [Sep-21-2011]
Q7SXW4	261	ER membrane protein compl	no	no	0.841	0.934	0.420	3e-52
Q5R7C1	261	ER membrane protein compl	yes	no	0.813	0.904	0.425	4e-52
Q9P0I2	261	ER membrane protein compl	yes	no	0.813	0.904	0.425	4e-52
Q3ZCB8	261	ER membrane protein compl	yes	no	0.813	0.904	0.425	5e-52
Q5U2V8	261	ER membrane protein compl	yes	no	0.813	0.904	0.421	1e-51
Q99KI3	261	ER membrane protein compl	yes	no	0.813	0.904	0.421	1e-51
Q9P787	258	ER membrane protein compl	yes	no	0.806	0.906	0.382	2e-43
Q54YN3	314	ER membrane protein compl	yes	no	0.796	0.735	0.371	5e-38
B5VLV9	253	ER membrane protein compl	N/A	no	0.796	0.913	0.348	2e-33
B3LQQ2	253	ER membrane protein compl	N/A	no	0.796	0.913	0.348	2e-33

>sp|Q7SXW4|EMC3_DANRE ER membrane protein complex subunit 3 OS=Danio rerio GN=emc3 PE=2 SV=1

 Score =  205 bits (522), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 106/252 (42%), Positives = 163/252 (64%), Gaps = 8/252 (3%)

Query: 45  MAE-DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARN 103
           MAE +L+LD+ IR WV++P+  +  L+G++R++VS L++S +    + V + QV++R+R 
Sbjct: 1   MAEPELLLDSNIRLWVVLPIVFITFLVGVIRHYVSILLQSDKKLTLEQVSDSQVLIRSRV 60

Query: 104 LRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMI 163
           LR    +I  +SF  R+ YF N+E+G     K + +       +DP+M  DMMK N++ +
Sbjct: 61  LRENGKYIPKQSFLMRKFYFNNQEDGFFK--KTKRKVVPPSPMTDPSMLTDMMKGNVTNV 118

Query: 164 IPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFG 223
           +P  L   W+N+ FSGFV  K+PFPLT RF+ MLQ GI+L ++D S+VSS SWYFLN+FG
Sbjct: 119 LPMILIGGWINWTFSGFVTTKVPFPLTLRFKPMLQQGIELLSLDASWVSSASWYFLNVFG 178

Query: 224 LRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFE 278
           LR ++SLILG++N  D ++ M  QMSG       D +K+  AE ++L++  H+WAL   E
Sbjct: 179 LRSMYSLILGQDNGADQSRIMQEQMSGAAMAMPADTNKAFKAEWEALELTDHQWALENVE 238

Query: 279 QRAETVLKDLVG 290
           +   +   DL G
Sbjct: 239 EDLMSKDLDLSG 250

Danio rerio (taxid: 7955)

>sp|Q5R7C1|EMC3_PONAB ER membrane protein complex subunit 3 OS=Pongo abelii GN=EMC3 PE=2 SV=3

 Score =  204 bits (520), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 105/247 (42%), Positives = 159/247 (64%), Gaps = 11/247 (4%)

Query: 48  DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAG 107
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 108 ANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 167
             +I  +SF  R+ YF N E+G     K + +       +DP M  DMMK N++ ++P  
Sbjct: 65  GKYIPKQSFLTRKYYFNNPEDGFFK--KTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMI 122

Query: 168 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 227
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct: 123 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 182

Query: 228 FSLILGEENATDDTQRMM--QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRA 281
           +SLILG++NA D + RMM  QM+G       D +K+   E ++L++  H+WAL   E+  
Sbjct: 183 YSLILGQDNAADQS-RMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE-- 239

Query: 282 ETVLKDL 288
           E + KDL
Sbjct: 240 ELMAKDL 246

Pongo abelii (taxid: 9601)

>sp|Q9P0I2|EMC3_HUMAN ER membrane protein complex subunit 3 OS=Homo sapiens GN=EMC3 PE=1 SV=3

 Score =  204 bits (520), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 105/247 (42%), Positives = 159/247 (64%), Gaps = 11/247 (4%)

Query: 48  DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAG 107
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 108 ANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 167
             +I  +SF  R+ YF N E+G     K + +       +DP M  DMMK N++ ++P  
Sbjct: 65  GKYIPKQSFLTRKYYFNNPEDGFFK--KTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMI 122

Query: 168 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 227
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct: 123 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 182

Query: 228 FSLILGEENATDDTQRMM--QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRA 281
           +SLILG++NA D + RMM  QM+G       D +K+   E ++L++  H+WAL   E+  
Sbjct: 183 YSLILGQDNAADQS-RMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE-- 239

Query: 282 ETVLKDL 288
           E + KDL
Sbjct: 240 ELMAKDL 246

Homo sapiens (taxid: 9606)

>sp|Q3ZCB8|EMC3_BOVIN ER membrane protein complex subunit 3 OS=Bos taurus GN=EMC3 PE=2 SV=3

 Score =  204 bits (520), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 105/247 (42%), Positives = 159/247 (64%), Gaps = 11/247 (4%)

Query: 48  DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAG 107
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 108 ANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 167
             +I  +SF  R+ YF N E+G     K + +       +DP M  DMMK N++ ++P  
Sbjct: 65  GKYIPKQSFLTRKYYFNNPEDGFFK--KTKRKVVPPSPVTDPTMLTDMMKGNVTNVLPMI 122

Query: 168 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 227
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct: 123 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 182

Query: 228 FSLILGEENATDDTQRMM--QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRA 281
           +SLILG++NA D + RMM  QM+G       D +K+   E ++L++  H+WAL   E+  
Sbjct: 183 YSLILGQDNAADQS-RMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE-- 239

Query: 282 ETVLKDL 288
           E + KDL
Sbjct: 240 ELMAKDL 246

Bos taurus (taxid: 9913)

>sp|Q5U2V8|EMC3_RAT ER membrane protein complex subunit 3 OS=Rattus norvegicus GN=Emc3 PE=2 SV=3

 Score =  203 bits (517), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 104/247 (42%), Positives = 159/247 (64%), Gaps = 11/247 (4%)

Query: 48  DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAG 107
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 108 ANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 167
             +I  +SF  R+ YF N E+G     K + +       +DP M  DMMK N++ ++P  
Sbjct: 65  GKYIPKQSFLTRKYYFNNPEDGFFK--KTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMI 122

Query: 168 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 227
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct: 123 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 182

Query: 228 FSLILGEENATDDTQRMM--QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRA 281
           +SLILG++NA D + RMM  QM+G       D +K+   E ++L++  H+WAL   E+  
Sbjct: 183 YSLILGQDNAADQS-RMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE-- 239

Query: 282 ETVLKDL 288
           E + +DL
Sbjct: 240 ELMARDL 246

Rattus norvegicus (taxid: 10116)

>sp|Q99KI3|EMC3_MOUSE ER membrane protein complex subunit 3 OS=Mus musculus GN=Emc3 PE=2 SV=3

 Score =  203 bits (517), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 104/247 (42%), Positives = 159/247 (64%), Gaps = 11/247 (4%)

Query: 48  DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAG 107
           +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR  
Sbjct: 5   ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query: 108 ANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 167
             +I  +SF  R+ YF N E+G     K + +       +DP M  DMMK N++ ++P  
Sbjct: 65  GKYIPKQSFLTRKYYFNNPEDGFFK--KTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMI 122

Query: 168 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 227
           L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct: 123 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 182

Query: 228 FSLILGEENATDDTQRMM--QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRA 281
           +SLILG++NA D + RMM  QM+G       D +K+   E ++L++  H+WAL   E+  
Sbjct: 183 YSLILGQDNAADQS-RMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE-- 239

Query: 282 ETVLKDL 288
           E + +DL
Sbjct: 240 ELMARDL 246

Mus musculus (taxid: 10090)

>sp|Q9P787|YNY3_SCHPO ER membrane protein complex subunit 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1711.03 PE=3 SV=1

 Score =  176 bits (445), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 96/251 (38%), Positives = 152/251 (60%), Gaps = 17/251 (6%)

Query: 47  EDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSS-QVPDPKIVKEGQVIVRARNLR 105
           + L+LD A+R+WVL+P+  VM+LIGILR+  + L++SS +    + ++E +++ RA  LR
Sbjct: 2   QKLLLDPALRNWVLLPIMFVMILIGILRHNATILLQSSPKKLSKEEIREQRLLQRAYALR 61

Query: 106 AGANFISPKSFRARRVYFCN--EENGLLHVPKGQAQNAQAQMFSDPNMA--MDMMKKNLS 161
           A +N + P+S  AR+ +     +    L      A  A   +  D  +   M+ MK N+ 
Sbjct: 62  ACSNSLLPESIEARKCFLIESLKSGKYLKPVDPNAPKAANPLMDDKTLEGLMESMKGNML 121

Query: 162 MIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNL 221
           M++PQT+   W+N FFSGF+  K+PFPLT RF+S+ Q+G+    +DV +VSS SWYFLNL
Sbjct: 122 MVVPQTIIMTWINEFFSGFILLKLPFPLTLRFKSIFQSGVATQDLDVQWVSSISWYFLNL 181

Query: 222 FGLRGLFSLILGEENATDDTQRMMQMSGF------------GFDPSKSLGAEKDSLDIIQ 269
           FGL+ +++L+LGE NA  +    M M+GF            G D SK + +E +++ I++
Sbjct: 182 FGLKSVYALLLGENNAASNATNEMGMAGFSSAAATAQLIQPGQDISKMMLSEAENVQILK 241

Query: 270 HEWALPKFEQR 280
           +E  L   E+R
Sbjct: 242 NESLLVDVEKR 252

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q54YN3|EMC3_DICDI ER membrane protein complex subunit 3 OS=Dictyostelium discoideum GN=emc3 PE=3 SV=1

 Score =  158 bits (399), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 94/253 (37%), Positives = 146/253 (57%), Gaps = 22/253 (8%)

Query: 49  LVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMR--SSQVPDPKIVKEGQVIVRARNLRA 106
           +VLD  IR+WV+IP+ +V+ ++  L+  +S++M+  S +  D +   + Q I R R L +
Sbjct: 6   IVLDVEIRNWVVIPILIVLFIVSALKLNISRIMQINSGKPQDVEKTMQMQTINRVRRLVS 65

Query: 107 GANFISPKSFRARRVYFCNE-----ENGLLH--VPKGQAQNAQA-----QMFSDPNMAMD 154
             N I  KSF  R+ Y C         G+L    P  +  N         MF+DP+   D
Sbjct: 66  FYNRIPQKSFFIRKAYLCGTTGSKTNKGILSSIAPTQEDSNPMNMMFANSMFTDPSGITD 125

Query: 155 MMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPF-PLTQRFRSMLQNGIDLSTVDVSYVSS 213
           M+K N+  +IPQ    +WVN FFSGFVA K+PF PLT RF++ LQ GI++ ++DVSYVSS
Sbjct: 126 MLKGNIMHLIPQVTMMSWVNHFFSGFVACKLPFFPLTIRFKTFLQRGIEMGSLDVSYVSS 185

Query: 214 RSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGFGFDPS------KSLGAEKDSLDI 267
            SWYFL  FG  G+ +++LGE   + D+Q ++Q S     P+      K   +EK+++++
Sbjct: 186 LSWYFLCWFGSEGINAILLGENMVSADSQ-LLQSSIEPGPPTQQTPIHKIYASEKENIEM 244

Query: 268 IQHEWALPKFEQR 280
           I+++  +   E R
Sbjct: 245 IRYDSLMTNIEDR 257

Dictyostelium discoideum (taxid: 44689)

>sp|B5VLV9|EMC3_YEAS6 ER membrane protein complex subunit 3 OS=Saccharomyces cerevisiae (strain AWRI1631) GN=AIM27 PE=3 SV=2

 Score =  143 bits (360), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 139/250 (55%), Gaps = 19/250 (7%)

Query: 49  LVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPD--PKI-VKEGQVIVRARNLR 105
           ++LD  ++ WVL+P+S+VMVL G+L+ ++  L+  S   +  P++ + E Q +  A+ L 
Sbjct: 1   MLLDDQLKYWVLLPISIVMVLTGVLKQYIMTLITGSSANEAQPRVKLTEWQYLQWAQLLI 60

Query: 106 AGANFISPKSFRARRVYFCNEENGLLHVPKGQAQN-AQA----QMFSDPNMA---MDMMK 157
                +S  +F A++ +   +     H+ K + Q  +QA      F+DPNM+   M+M K
Sbjct: 61  GNGGNLSSDAFAAKKEFLVKDLTEERHLAKAKQQGGSQAGEVPNPFNDPNMSNAMMNMAK 120

Query: 158 KNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWY 217
            N++  IPQT+   WVN FF+GF+  ++PFPLT +F+ MLQ GI    +DV +VSS SWY
Sbjct: 121 GNMASFIPQTIIMWWVNHFFAGFILMQLPFPLTAKFKEMLQTGIICQDLDVRWVSSISWY 180

Query: 218 FLNLFGLRGLFSLI------LGEENATDDTQRMMQMSGFGFDPSKSLGAEKDSLDIIQHE 271
           F+++ GL  +++LI      +G +      Q          D  K++ A  + L IIQHE
Sbjct: 181 FISVLGLNPVYNLIGLNDQDMGIQAGIGGPQGPQGPPQSQVD--KAMHAMANDLTIIQHE 238

Query: 272 WALPKFEQRA 281
             L   EQR 
Sbjct: 239 TCLDNVEQRV 248

The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER).

Saccharomyces cerevisiae (strain AWRI1631) (taxid: 545124)

>sp|B3LQQ2|EMC3_YEAS1 ER membrane protein complex subunit 3 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=AIM27 PE=3 SV=2

 Score =  143 bits (360), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 139/250 (55%), Gaps = 19/250 (7%)

Query: 49  LVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPD--PKI-VKEGQVIVRARNLR 105
           ++LD  ++ WVL+P+S+VMVL G+L+ ++  L+  S   +  P++ + E Q +  A+ L 
Sbjct: 1   MLLDDQLKYWVLLPISIVMVLTGVLKQYIMTLITGSSANEAQPRVKLTEWQYLQWAQLLI 60

Query: 106 AGANFISPKSFRARRVYFCNEENGLLHVPKGQAQN-AQA----QMFSDPNMA---MDMMK 157
                +S  +F A++ +   +     H+ K + Q  +QA      F+DPNM+   M+M K
Sbjct: 61  GNGGNLSSDAFAAKKEFLVKDLTEERHLAKAKQQGGSQAGEVPNPFNDPNMSNAMMNMAK 120

Query: 158 KNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWY 217
            N++  IPQT+   WVN FF+GF+  ++PFPLT +F+ MLQ GI    +DV +VSS SWY
Sbjct: 121 GNMASFIPQTIIMWWVNHFFAGFILMQLPFPLTAKFKEMLQTGIICQDLDVRWVSSISWY 180

Query: 218 FLNLFGLRGLFSLI------LGEENATDDTQRMMQMSGFGFDPSKSLGAEKDSLDIIQHE 271
           F+++ GL  +++LI      +G +      Q          D  K++ A  + L IIQHE
Sbjct: 181 FISVLGLNPVYNLIGLNDQDMGIQAGIGGPQGPQGPPQSQVD--KAMHAMANDLTIIQHE 238

Query: 272 WALPKFEQRA 281
             L   EQR 
Sbjct: 239 TCLDNVEQRV 248

The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER).

Saccharomyces cerevisiae (strain RM11-1a) (taxid: 285006)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	290
225469994	246	PREDICTED: transmembrane protein 111 [Vi	0.844	0.995	0.938	1e-133
255559070	246	Protein pob, putative [Ricinus communis]	0.844	0.995	0.926	1e-130
224139538	246	predicted protein [Populus trichocarpa]	0.844	0.995	0.914	1e-129
388496608	246	unknown [Lotus japonicus]	0.844	0.995	0.906	1e-128
388494522	246	unknown [Lotus japonicus]	0.844	0.995	0.902	1e-127
15235414	246	uncharacterized protein [Arabidopsis tha	0.844	0.995	0.902	1e-127
224086401	246	predicted protein [Populus trichocarpa]	0.844	0.995	0.897	1e-127
356566401	246	PREDICTED: transmembrane protein 111-lik	0.834	0.983	0.909	1e-127
297803884	246	hypothetical protein ARALYDRAFT_914375 [	0.844	0.995	0.906	1e-127
297813805	246	hypothetical protein ARALYDRAFT_911661 [	0.844	0.995	0.897	1e-127

>gi|225469994|ref|XP_002277989.1| PREDICTED: transmembrane protein 111 [Vitis vinifera] gi|359495548|ref|XP_003635017.1| PREDICTED: transmembrane protein 111-like [Vitis vinifera] gi|147816093|emb|CAN72892.1| hypothetical protein VITISV_022312 [Vitis vinifera]

 Score =  479 bits (1232), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 230/245 (93%), Positives = 237/245 (96%)

Query: 45  MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNL 104
           MAEDLVLDTAIRDWVLIPLSVVMVLIG+LRYFVSKLMRSSQVPD KIV+EGQVIVRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSQVPDSKIVREGQVIVRARNL 60

Query: 105 RAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 164
           RA AN+I  KSFRAR+VYF NEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RAAANYIPAKSFRARKVYFNNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 165 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 224
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 225 RGLFSLILGEENATDDTQRMMQMSGFGFDPSKSLGAEKDSLDIIQHEWALPKFEQRAETV 284
           RGLFSLILGEENATDDTQRMMQMSGFG DP+KSLGAEKDSLDI+QHEWALPKFEQRAE V
Sbjct: 181 RGLFSLILGEENATDDTQRMMQMSGFGVDPTKSLGAEKDSLDIVQHEWALPKFEQRAEAV 240

Query: 285 LKDLV 289
           L+ LV
Sbjct: 241 LRKLV 245

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559070|ref|XP_002520557.1| Protein pob, putative [Ricinus communis] gi|223540217|gb|EEF41790.1| Protein pob, putative [Ricinus communis]

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 227/245 (92%), Positives = 233/245 (95%)

Query: 45  MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNL 104
           MAEDLVLDTAIRDWVLIPLSVVMVLIG+LRYFVSKLMRS Q PD KIVKEGQVI+RAR L
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSYQTPDAKIVKEGQVILRARYL 60

Query: 105 RAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 164
           R+GANFI PKSFRARR YF NEE+GLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RSGANFIPPKSFRARRAYFSNEEDGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 120

Query: 165 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 224
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 225 RGLFSLILGEENATDDTQRMMQMSGFGFDPSKSLGAEKDSLDIIQHEWALPKFEQRAETV 284
           RGLFSLILGEENA DDTQRMMQMSGFGFDPSKSL AEKD LDI+QHEWALPKFEQRAE V
Sbjct: 181 RGLFSLILGEENAVDDTQRMMQMSGFGFDPSKSLSAEKDGLDIVQHEWALPKFEQRAEAV 240

Query: 285 LKDLV 289
           L+ LV
Sbjct: 241 LRKLV 245

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139538|ref|XP_002323159.1| predicted protein [Populus trichocarpa] gi|222867789|gb|EEF04920.1| predicted protein [Populus trichocarpa]

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 224/245 (91%), Positives = 230/245 (93%)

Query: 45  MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNL 104
           MAEDLVLDTAIRDWVLIPL+VVM+LIGILRYFVSKLM+S Q PD KIVKEGQV+VRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLTVVMILIGILRYFVSKLMQSQQTPDAKIVKEGQVVVRARNL 60

Query: 105 RAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 164
           RAGANFI  KSFRARR YF NEENGLLHVPKGQ QN QAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RAGANFIPAKSFRARRAYFSNEENGLLHVPKGQGQNPQAQMFSDPNMAMDMMKKNLSMII 120

Query: 165 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 224
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 225 RGLFSLILGEENATDDTQRMMQMSGFGFDPSKSLGAEKDSLDIIQHEWALPKFEQRAETV 284
           RGLFSLILGEENA DDTQRMMQM GFGFDP+K+L AEKD LDIIQHEWALPKFEQRAE V
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMGGFGFDPTKNLSAEKDGLDIIQHEWALPKFEQRAEAV 240

Query: 285 LKDLV 289
           LK LV
Sbjct: 241 LKKLV 245

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388496608|gb|AFK36370.1| unknown [Lotus japonicus]

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 222/245 (90%), Positives = 229/245 (93%)

Query: 45  MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNL 104
           MAEDLVLDTAIRDWVLIPLSVVMVLIG+LRYFVSKLMRSSQ PD KIVKEGQVI+RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSQTPDAKIVKEGQVILRARNL 60

Query: 105 RAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 164
           R GANFI  K+FRAR+VY+CNEE GLL VPKGQAQN QAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RTGANFIPSKAFRARKVYYCNEEKGLLFVPKGQAQNPQAQMFSDPNMAMDMMKKNLSMII 120

Query: 165 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 224
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 225 RGLFSLILGEENATDDTQRMMQMSGFGFDPSKSLGAEKDSLDIIQHEWALPKFEQRAETV 284
           RGLFSLILGEENA DDTQRMMQM GFGFDPSK L AEKD+LDI QHEWALP FEQRAE V
Sbjct: 181 RGLFSLILGEENAVDDTQRMMQMGGFGFDPSKGLSAEKDNLDITQHEWALPNFEQRAEAV 240

Query: 285 LKDLV 289
           LK L+
Sbjct: 241 LKKLI 245

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388494522|gb|AFK35327.1| unknown [Lotus japonicus]

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 221/245 (90%), Positives = 229/245 (93%)

Query: 45  MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNL 104
           MAEDLVLDTAIRDWVLIPLSVVMVLIG+LRYFVSKLMRSSQ PD KIVKEGQVI+RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMRSSQTPDAKIVKEGQVILRARNL 60

Query: 105 RAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 164
           R GANFI  K+FRAR+VY+CNEE GLL VPKGQAQN QAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RTGANFIPSKAFRARKVYYCNEEKGLLFVPKGQAQNPQAQMFSDPNMAMDMMKKNLSMII 120

Query: 165 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 224
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 225 RGLFSLILGEENATDDTQRMMQMSGFGFDPSKSLGAEKDSLDIIQHEWALPKFEQRAETV 284
           RGLFSLILGEENA DDTQRM+QM GFGFDPSK L AEKD+LDI QHEWALP FEQRAE V
Sbjct: 181 RGLFSLILGEENAVDDTQRMIQMGGFGFDPSKGLSAEKDNLDITQHEWALPNFEQRAEAV 240

Query: 285 LKDLV 289
           LK L+
Sbjct: 241 LKKLI 245

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235414|ref|NP_192996.1| uncharacterized protein [Arabidopsis thaliana] gi|5823570|emb|CAB53752.1| putative protein [Arabidopsis thaliana] gi|7267961|emb|CAB78302.1| putative protein [Arabidopsis thaliana] gi|21592847|gb|AAM64797.1| unknown [Arabidopsis thaliana] gi|27311749|gb|AAO00840.1| putative protein [Arabidopsis thaliana] gi|32189305|gb|AAP75807.1| At4g12590 [Arabidopsis thaliana] gi|332657752|gb|AEE83152.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 221/245 (90%), Positives = 231/245 (94%)

Query: 45  MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNL 104
           MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRS+  PD K+VKEGQV++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSTPTPDAKMVKEGQVVIRARNL 60

Query: 105 RAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 164
           + GANFI PKSFRARR YF NEENGLLHVPKG+AQN QA MFSDPNMAMDMMKKNLSMII
Sbjct: 61  KVGANFIPPKSFRARRFYFSNEENGLLHVPKGEAQNPQAAMFSDPNMAMDMMKKNLSMII 120

Query: 165 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 224
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 225 RGLFSLILGEENATDDTQRMMQMSGFGFDPSKSLGAEKDSLDIIQHEWALPKFEQRAETV 284
           RGLFSLILG+ENA DDTQRMMQM GFGFD SKSLGAEKD LDIIQHEWALP+FEQRAE+V
Sbjct: 181 RGLFSLILGDENAIDDTQRMMQMGGFGFDASKSLGAEKDGLDIIQHEWALPRFEQRAESV 240

Query: 285 LKDLV 289
           L+ LV
Sbjct: 241 LRKLV 245

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224086401|ref|XP_002307881.1| predicted protein [Populus trichocarpa] gi|222853857|gb|EEE91404.1| predicted protein [Populus trichocarpa]

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 220/245 (89%), Positives = 229/245 (93%)

Query: 45  MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNL 104
           MAEDLVLDTAIRDWVLIPL+VVM+LIGILRYFVSKLMRS Q PD K+V+EGQV++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLTVVMILIGILRYFVSKLMRSQQNPDAKVVREGQVVIRARNL 60

Query: 105 RAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 164
           RAGANFI  KSFRARR YF NEENGLLHVPKGQ QN QAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RAGANFIPSKSFRARRAYFSNEENGLLHVPKGQGQNPQAQMFSDPNMAMDMMKKNLSMII 120

Query: 165 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 224
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 225 RGLFSLILGEENATDDTQRMMQMSGFGFDPSKSLGAEKDSLDIIQHEWALPKFEQRAETV 284
           RGLFSLILGEENA DDTQRMMQMSGFG DP+K+L AEKD LDIIQHEWALPKFEQRAE  
Sbjct: 181 RGLFSLILGEENAMDDTQRMMQMSGFGMDPTKNLSAEKDGLDIIQHEWALPKFEQRAEAA 240

Query: 285 LKDLV 289
           LK L+
Sbjct: 241 LKKLL 245

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356566401|ref|XP_003551420.1| PREDICTED: transmembrane protein 111-like [Glycine max]

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 220/242 (90%), Positives = 227/242 (93%)

Query: 45  MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNL 104
           MAEDLVLDTAIRDWVLIPLSVVMVLIG+LRYFVSKLM SSQ PD KIVKEGQVIVRARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGVLRYFVSKLMHSSQTPDAKIVKEGQVIVRARNL 60

Query: 105 RAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 164
           RAGANFI  K+FRAR++YFCNEENGLL VPKGQ QN QAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  RAGANFIPSKAFRARKIYFCNEENGLLFVPKGQGQNPQAQMFSDPNMAMDMMKKNLSMII 120

Query: 165 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 224
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 225 RGLFSLILGEENATDDTQRMMQMSGFGFDPSKSLGAEKDSLDIIQHEWALPKFEQRAETV 284
           RGLFSLILGEENA DDTQRMMQM GFGFDPSK L AEKD+LDI QH+WALP FEQRAE V
Sbjct: 181 RGLFSLILGEENAVDDTQRMMQMGGFGFDPSKGLSAEKDNLDITQHDWALPNFEQRAEAV 240

Query: 285 LK 286
           L+
Sbjct: 241 LR 242

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297803884|ref|XP_002869826.1| hypothetical protein ARALYDRAFT_914375 [Arabidopsis lyrata subsp. lyrata] gi|297315662|gb|EFH46085.1| hypothetical protein ARALYDRAFT_914375 [Arabidopsis lyrata subsp. lyrata]

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 222/245 (90%), Positives = 229/245 (93%)

Query: 45  MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNL 104
           MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSS  PD K+VKEGQV++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSPTPDAKMVKEGQVVIRARNL 60

Query: 105 RAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 164
           +AGANFI PKSFRARR YF NEENGLLHVPK Q QN QAQMFSDPNMAMDMMKKNLSMII
Sbjct: 61  KAGANFIPPKSFRARRFYFSNEENGLLHVPKDQTQNPQAQMFSDPNMAMDMMKKNLSMII 120

Query: 165 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 224
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 225 RGLFSLILGEENATDDTQRMMQMSGFGFDPSKSLGAEKDSLDIIQHEWALPKFEQRAETV 284
           RGLFSLILG+ENA DDTQRMMQM GFGFD SKSL AEKD LDIIQHEWALP+FE RAE+V
Sbjct: 181 RGLFSLILGDENAIDDTQRMMQMGGFGFDASKSLSAEKDGLDIIQHEWALPRFEHRAESV 240

Query: 285 LKDLV 289
           LK LV
Sbjct: 241 LKKLV 245

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297813805|ref|XP_002874786.1| hypothetical protein ARALYDRAFT_911661 [Arabidopsis lyrata subsp. lyrata] gi|297320623|gb|EFH51045.1| hypothetical protein ARALYDRAFT_911661 [Arabidopsis lyrata subsp. lyrata]

 Score =  459 bits (1180), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 220/245 (89%), Positives = 230/245 (93%)

Query: 45  MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNL 104
           MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSS  PD K+VKEGQV++RARNL
Sbjct: 1   MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSPTPDAKMVKEGQVVIRARNL 60

Query: 105 RAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 164
           + GANFI P+SFR RR YF NEENGLLHVPKG+AQN QA MFSDPNMAMDMMKKNLSMII
Sbjct: 61  KVGANFIPPRSFRTRRFYFSNEENGLLHVPKGEAQNPQAAMFSDPNMAMDMMKKNLSMII 120

Query: 165 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 224
           PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct: 121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query: 225 RGLFSLILGEENATDDTQRMMQMSGFGFDPSKSLGAEKDSLDIIQHEWALPKFEQRAETV 284
           RGLFSLILG+ENA DDTQRMMQM GFGFD SKSLGAEKD LDIIQHEWALP+FEQRAE+V
Sbjct: 181 RGLFSLILGDENAIDDTQRMMQMGGFGFDASKSLGAEKDGLDIIQHEWALPRFEQRAESV 240

Query: 285 LKDLV 289
           L+ LV
Sbjct: 241 LRKLV 245

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	290
TAIR|locus:2135645	246	AT4G12590 "AT4G12590" [Arabido	0.844	0.995	0.902	1.2e-115
ZFIN|ZDB-GENE-050102-7	253	zgc:86609 "zgc:86609" [Danio r	0.817	0.936	0.410	2.8e-50
ZFIN|ZDB-GENE-040426-2904	261	emc3 "ER membrane protein comp	0.827	0.919	0.424	7.4e-50
UNIPROTKB|Q9P0I2	261	EMC3 "ER membrane protein comp	0.817	0.908	0.418	1.5e-49
UNIPROTKB|Q5R7C1	261	EMC3 "ER membrane protein comp	0.817	0.908	0.418	1.5e-49
UNIPROTKB|Q3ZCB8	261	EMC3 "ER membrane protein comp	0.817	0.908	0.418	2e-49
UNIPROTKB|F1SQC6	261	EMC3 "Uncharacterized protein"	0.817	0.908	0.418	2e-49
MGI|MGI:1913337	261	Emc3 "ER membrane protein comp	0.817	0.908	0.414	3.2e-49
RGD|1311566	261	Emc3 "ER membrane protein comp	0.817	0.908	0.414	3.2e-49
UNIPROTKB|E1BQV4	261	TMEM111 "Uncharacterized prote	0.827	0.919	0.416	1.1e-48

TAIR|locus:2135645 AT4G12590 "AT4G12590" [Arabidopsis thaliana (taxid:3702)]

 Score = 1140 (406.4 bits), Expect = 1.2e-115, P = 1.2e-115
 Identities = 221/245 (90%), Positives = 231/245 (94%)

Query:    45 MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNL 104
             MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRS+  PD K+VKEGQV++RARNL
Sbjct:     1 MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSTPTPDAKMVKEGQVVIRARNL 60

Query:   105 RAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 164
             + GANFI PKSFRARR YF NEENGLLHVPKG+AQN QA MFSDPNMAMDMMKKNLSMII
Sbjct:    61 KVGANFIPPKSFRARRFYFSNEENGLLHVPKGEAQNPQAAMFSDPNMAMDMMKKNLSMII 120

Query:   165 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 224
             PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL
Sbjct:   121 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 180

Query:   225 RGLFSLILGEENATDDTQRMMQMSGFGFDPSKSLGAEKDSLDIIQHEWALPKFEQRAETV 284
             RGLFSLILG+ENA DDTQRMMQM GFGFD SKSLGAEKD LDIIQHEWALP+FEQRAE+V
Sbjct:   181 RGLFSLILGDENAIDDTQRMMQMGGFGFDASKSLGAEKDGLDIIQHEWALPRFEQRAESV 240

Query:   285 LKDLV 289
             L+ LV
Sbjct:   241 LRKLV 245

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

ZFIN|ZDB-GENE-050102-7 zgc:86609 "zgc:86609" [Danio rerio (taxid:7955)]

 Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
 Identities = 101/246 (41%), Positives = 163/246 (66%)

Query:    48 DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAG 107
             +L+LD++IR WV++P+  +   +G+LR++++KL+ + +  D + V + QV++R+R LR  
Sbjct:     5 ELLLDSSIRFWVVLPIVFITFFVGVLRHYITKLIHNEKKVDLQQVSDSQVLLRSRILREN 64

Query:   108 ANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 167
               ++  +SF  R+ YF N E G     K +         +DP+M  DMMK NL+ ++P  
Sbjct:    65 GKYLPKQSFAMRKHYFNNPETGFFKKVKRKV--TPKNPMTDPSMLTDMMKGNLTNVLPMI 122

Query:   168 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 227
             L   W+N+ FSGF+  K+PFPLT RF+ MLQ GI+L ++D S+VSS SWYFLN+FGLR +
Sbjct:   123 LIGGWINWAFSGFLTTKVPFPLTLRFKPMLQRGIELVSLDASWVSSASWYFLNVFGLRSM 182

Query:   228 FSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRAE 282
             ++LILG++NA D ++ M  QM+G       DP+K+  +E ++L+I++H+WAL   E+  E
Sbjct:   183 YTLILGQDNAADQSRIMQDQMTGAAMAMPPDPNKAFKSEWEALEIVEHKWALENVEE--E 240

Query:   283 TVLKDL 288
              + +DL
Sbjct:   241 LMCQDL 246

GO:0016020 "membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

ZFIN|ZDB-GENE-040426-2904 emc3 "ER membrane protein complex subunit 3" [Danio rerio (taxid:7955)]

 Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
 Identities = 106/250 (42%), Positives = 163/250 (65%)

Query:    45 MAE-DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARN 103
             MAE +L+LD+ IR WV++P+  +  L+G++R++VS L++S +    + V + QV++R+R 
Sbjct:     1 MAEPELLLDSNIRLWVVLPIVFITFLVGVIRHYVSILLQSDKKLTLEQVSDSQVLIRSRV 60

Query:   104 LRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMI 163
             LR    +I  +SF  R+ YF N+E+G     K +         +DP+M  DMMK N++ +
Sbjct:    61 LRENGKYIPKQSFLMRKFYFNNQEDGFFKKTKRKV--VPPSPMTDPSMLTDMMKGNVTNV 118

Query:   164 IPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFG 223
             +P  L   W+N+ FSGFV  K+PFPLT RF+ MLQ GI+L ++D S+VSS SWYFLN+FG
Sbjct:   119 LPMILIGGWINWTFSGFVTTKVPFPLTLRFKPMLQQGIELLSLDASWVSSASWYFLNVFG 178

Query:   224 LRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFE 278
             LR ++SLILG++N  D ++ M  QMSG       D +K+  AE ++L++  H+WAL   E
Sbjct:   179 LRSMYSLILGQDNGADQSRIMQEQMSGAAMAMPADTNKAFKAEWEALELTDHQWALENVE 238

Query:   279 QRAETVLKDL 288
             +  + + KDL
Sbjct:   239 E--DLMSKDL 246

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0030140 "trans-Golgi network transport vesicle" evidence=IDA

GO:0045494 "photoreceptor cell maintenance" evidence=IMP

GO:0060041 "retina development in camera-type eye" evidence=IMP

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0072546 "ER membrane protein complex" evidence=ISS

UNIPROTKB|Q9P0I2 EMC3 "ER membrane protein complex subunit 3" [Homo sapiens (taxid:9606)]

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 103/246 (41%), Positives = 157/246 (63%)

Query:    48 DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAG 107
             +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR  
Sbjct:     5 ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query:   108 ANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 167
               +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  
Sbjct:    65 GKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMI 122

Query:   168 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 227
             L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct:   123 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 182

Query:   228 FSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRAE 282
             +SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WAL   E+  E
Sbjct:   183 YSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE--E 240

Query:   283 TVLKDL 288
              + KDL
Sbjct:   241 LMAKDL 246

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0072546 "ER membrane protein complex" evidence=IDA

GO:0016021 "integral to membrane" evidence=IDA

UNIPROTKB|Q5R7C1 EMC3 "ER membrane protein complex subunit 3" [Pongo abelii (taxid:9601)]

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 103/246 (41%), Positives = 157/246 (63%)

Query:    48 DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAG 107
             +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR  
Sbjct:     5 ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query:   108 ANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 167
               +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  
Sbjct:    65 GKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMI 122

Query:   168 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 227
             L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct:   123 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 182

Query:   228 FSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRAE 282
             +SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WAL   E+  E
Sbjct:   183 YSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE--E 240

Query:   283 TVLKDL 288
              + KDL
Sbjct:   241 LMAKDL 246

GO:0016021 "integral to membrane" evidence=ISS

GO:0072546 "ER membrane protein complex" evidence=ISS

UNIPROTKB|Q3ZCB8 EMC3 "ER membrane protein complex subunit 3" [Bos taurus (taxid:9913)]

 Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
 Identities = 103/246 (41%), Positives = 157/246 (63%)

Query:    48 DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAG 107
             +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR  
Sbjct:     5 ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query:   108 ANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 167
               +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  
Sbjct:    65 GKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPVTDPTMLTDMMKGNVTNVLPMI 122

Query:   168 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 227
             L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct:   123 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 182

Query:   228 FSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRAE 282
             +SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WAL   E+  E
Sbjct:   183 YSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE--E 240

Query:   283 TVLKDL 288
              + KDL
Sbjct:   241 LMAKDL 246

GO:0072546 "ER membrane protein complex" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

UNIPROTKB|F1SQC6 EMC3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
 Identities = 103/246 (41%), Positives = 157/246 (63%)

Query:    48 DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAG 107
             +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR  
Sbjct:     5 ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query:   108 ANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 167
               +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  
Sbjct:    65 GKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMI 122

Query:   168 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 227
             L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct:   123 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 182

Query:   228 FSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRAE 282
             +SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WAL   E+  E
Sbjct:   183 YSLILGQDNAADQSRMMQEQMTGAAVAMPADTNKAFKTEWEALELTDHQWALDDVEE--E 240

Query:   283 TVLKDL 288
              + KDL
Sbjct:   241 LMAKDL 246

GO:0072546 "ER membrane protein complex" evidence=IEA

MGI|MGI:1913337 Emc3 "ER membrane protein complex subunit 3" [Mus musculus (taxid:10090)]

 Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
 Identities = 102/246 (41%), Positives = 157/246 (63%)

Query:    48 DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAG 107
             +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR  
Sbjct:     5 ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query:   108 ANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 167
               +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  
Sbjct:    65 GKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMI 122

Query:   168 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 227
             L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct:   123 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 182

Query:   228 FSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRAE 282
             +SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WAL   E+  E
Sbjct:   183 YSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE--E 240

Query:   283 TVLKDL 288
              + +DL
Sbjct:   241 LMARDL 246

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISO

GO:0072546 "ER membrane protein complex" evidence=ISO

RGD|1311566 Emc3 "ER membrane protein complex subunit 3" [Rattus norvegicus (taxid:10116)]

 Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
 Identities = 102/246 (41%), Positives = 157/246 (63%)

Query:    48 DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAG 107
             +L+LD+ IR WV++P+ ++   +G++R++VS L++S +    + V + QV++R+R LR  
Sbjct:     5 ELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLREN 64

Query:   108 ANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQT 167
               +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ ++P  
Sbjct:    65 GKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNVLPMI 122

Query:   168 LTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGL 227
             L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FGLR +
Sbjct:   123 LIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSI 182

Query:   228 FSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFEQRAE 282
             +SLILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WAL   E+  E
Sbjct:   183 YSLILGQDNAADQSRMMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALDDVEE--E 240

Query:   283 TVLKDL 288
              + +DL
Sbjct:   241 LMARDL 246

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=ISO;ISS

GO:0072546 "ER membrane protein complex" evidence=ISO;ISS

UNIPROTKB|E1BQV4 TMEM111 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 104/250 (41%), Positives = 159/250 (63%)

Query:    45 MAE-DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARN 103
             M+E +L+LD+ IR WV++P+  +   +G++R++VS L++S +    + V + QV++R+R 
Sbjct:     1 MSEPELLLDSNIRLWVVLPIVFITFFVGMIRHYVSILLQSDKRLTQEQVSDSQVLIRSRV 60

Query:   104 LRAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMI 163
             LR    +I  +SF  R+ YF N E+G     K +         +DP M  DMMK N++ +
Sbjct:    61 LRENGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKV--VPPSPMTDPTMLTDMMKGNVTNV 118

Query:   164 IPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFG 223
             +P  L   W+N  FSGFV  K+PFPLT RF+ MLQ GI+L T+D S+VSS SWYFLN+FG
Sbjct:   119 LPMILIGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFG 178

Query:   224 LRGLFSLILGEENATDDTQRMM-QMSGFGF----DPSKSLGAEKDSLDIIQHEWALPKFE 278
             LR +++LILG++NA D ++ M  QM+G       D +K+   E ++L++  H+WAL   E
Sbjct:   179 LRSIYTLILGQDNAADQSRVMQEQMTGAAMAMPADTNKAFKTEWEALELTDHQWALEDVE 238

Query:   279 QRAETVLKDL 288
             +  E + KDL
Sbjct:   239 E--ELMAKDL 246

GO:0072546 "ER membrane protein complex" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9P0I2	EMC3_HUMAN	No assigned EC number	0.4251	0.8137	0.9042	yes	no
Q5R7C1	EMC3_PONAB	No assigned EC number	0.4251	0.8137	0.9042	yes	no
Q99KI3	EMC3_MOUSE	No assigned EC number	0.4210	0.8137	0.9042	yes	no
Q3ZCB8	EMC3_BOVIN	No assigned EC number	0.4251	0.8137	0.9042	yes	no
Q5U2V8	EMC3_RAT	No assigned EC number	0.4210	0.8137	0.9042	yes	no
Q9P787	YNY3_SCHPO	No assigned EC number	0.3824	0.8068	0.9069	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	290
pfam01956	168	pfam01956, DUF106, Integral membrane protein DUF10	3e-52

>gnl|CDD|216807 pfam01956, DUF106, Integral membrane protein DUF106

 Score =  168 bits (428), Expect = 3e-52
 Identities = 80/192 (41%), Positives = 110/192 (57%), Gaps = 27/192 (14%)

Query: 48  DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVP---DPKIVKEGQVIVRARNL 104
           DL+LD  IR   L+P+ +V++LIGILR  +S+L++   +    +    +E ++  RAR L
Sbjct: 1   DLLLDPLIRL-WLLPIFIVILLIGILRGLLSELLQWLLIDRKMEKYQKREKEIQKRAREL 59

Query: 105 RAGANFISPKSFRARRVYFCNEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMII 164
           R   + +SPK F  R+                     + Q      M MDMMK N +++I
Sbjct: 60  RKNGDKLSPKKFEKRQEELM-----------------EDQK----EMMMDMMKPNFAIMI 98

Query: 165 PQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGL 224
           PQ L F W+N FFSGFV AK+PFPLT RF+ MLQ G+D   +DV+ VSS SWYFL  FGL
Sbjct: 99  PQILIFGWINSFFSGFVVAKLPFPLTGRFKGMLQRGVD--GLDVTDVSSISWYFLCSFGL 156

Query: 225 RGLFSLILGEEN 236
           R +   +LG  N
Sbjct: 157 RQVIQKLLGFAN 168

This archaebacterial protein family has no known function. Members are predicted to be integral membrane proteins. Length = 168

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	290
KOG3188	246	consensus Uncharacterized conserved protein [Funct	100.0
PF01956	168	DUF106: Integral membrane protein DUF106; InterPro	100.0
KOG3312	186	consensus Predicted membrane protein [Function unk	98.85
COG1422	201	Predicted membrane protein [Function unknown]	95.56

>KOG3188 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.1e-107  Score=733.02  Aligned_cols=241  Identities=57%  Similarity=0.939  Sum_probs=228.6

Q ss_pred             cccccccccccccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCChhhhhhhhHHHHHHHHhhCCCCCCHHHHHHHHHHHh
Q 022876           45 MAEDLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSSQVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFC  124 (290)
Q Consensus        45 ~~~~L~LDp~IR~WVllPI~ivmilvGiLRhyvt~Ll~s~kk~~~~~vre~q~L~Ra~~Lr~n~~~L~~~sF~~Rk~~~~  124 (290)
                      |+.+|+|||+||+||||||+|||||+|||||||++|++++||.+.++++|+|+|+||++||+||++||++||++||+|||
T Consensus         1 Mtp~LLLD~aiR~WVlLPI~ivm~liGilRhyvsiLl~s~kk~~~~~v~e~q~l~rAr~Lr~ng~~l~~~Sf~aRk~yl~   80 (246)
T KOG3188|consen    1 MTPDLLLDPAIRYWVLLPIVIVMFLIGILRHYVSILLQSSKKLEQEQVKEGQYLIRARLLRENGNFLPPQSFAARKEYLN   80 (246)
T ss_pred             CchhhccChHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHHhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHhh
Confidence            45699999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCccccccCCCCcchhccCCCChhHHHHHHHhhhhhHHhHHHHHHHHHHhhhcceeeeccCCChhhHHHHhhccCCCC
Q 022876          125 NEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLS  204 (290)
Q Consensus       125 ~~~~G~~~~~~~~~~~~~~npm~DP~~Mm~MmKgNm~~~IPq~vIm~WIN~FFSGFVv~KlPFPLT~rFK~MLQrGI~l~  204 (290)
                      ++|+|++.+.|.+..+++++||+||+||||||||||.|+||||+|||||||||||||++|+|||||.|||+||||||++.
T Consensus        81 ~~e~g~l~~~k~~~~~~~~~~~~DpsmlmdmmKgNm~~viPqtii~~WiN~fFSGFv~~kvPFPLTlrFK~MlQ~Gi~l~  160 (246)
T KOG3188|consen   81 NEETGYLKKAKQQAAGEAPPPFNDPSMLMDMMKGNMANVIPQTIIGGWINWFFSGFVTTKVPFPLTLRFKSMLQRGIDLQ  160 (246)
T ss_pred             cccccccccccccccCCCCCCCCCHHHHHHHHhhhHHHHhHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHcCchhh
Confidence            99999777666555555667899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccchhhhHHHHHHHhhhhHHHHHHhCCCCCchhHHHHHhhcCC----CCChhhHHHHHHhccccccccccccchHHH
Q 022876          205 TVDVSYVSSRSWYFLNLFGLRGLFSLILGEENATDDTQRMMQMSGF----GFDPSKSLGAEKDSLDIIQHEWALPKFEQR  280 (290)
Q Consensus       205 dLDvswVSSlSWYFLnlFGLr~vy~LlLG~~naad~~~~m~~~~g~----g~d~~K~fkaE~enL~i~~H~~~ld~iE~r  280 (290)
                      ||||+||||+||||||+|||||||+||||++|||||++.|++|+|.    ++|+.|+|++|||+|++++|+|+|.++|+|
T Consensus       161 ~LDv~wVSS~SWYFLnvfGLrsiysLiLG~~Naadq~~~~~~M~G~~~~~p~d~~ka~~~e~e~lqi~~h~~al~~ve~~  240 (246)
T KOG3188|consen  161 DLDVSWVSSASWYFLNVFGLRSIYSLILGEENAADQTQAMMDMTGFAMAMPQDASKAFKAEWEALQIIQHEWALIDVEKR  240 (246)
T ss_pred             hcchhHhhhhHHHHHHHhhhHHHHHHHhcccccccHHHHHHHhcccccCCccchHHHHHhHHHHHHHHHHHhhhhhHHHH
Confidence            9999999999999999999999999999999999999999998762    449999999999999999999999999999


Q ss_pred             HHHHH
Q 022876          281 AETVL  285 (290)
Q Consensus       281 ~l~~L  285 (290)
                      +++.+
T Consensus       241 ~~a~~  245 (246)
T KOG3188|consen  241 LLAQF  245 (246)
T ss_pred             HHHhh
Confidence            77654

>PF01956 DUF106: Integral membrane protein DUF106; InterPro: IPR002809 This entry represents a group of eukaryotic and archaeal proteins that have no known function

Probab=100.00  E-value=4.2e-51  Score=350.65  Aligned_cols=165  Identities=47%  Similarity=0.822  Sum_probs=156.7

Q ss_pred             ccccccccccchHHHHHHHHHHHHHHHHHHHHhhcCC---CCCChhhhhhhhHHHHHHHHhhCCCCCCHHHHHHHHHHHh
Q 022876           48 DLVLDTAIRDWVLIPLSVVMVLIGILRYFVSKLMRSS---QVPDPKIVKEGQVIVRARNLRAGANFISPKSFRARRVYFC  124 (290)
Q Consensus        48 ~L~LDp~IR~WVllPI~ivmilvGiLRhyvt~Ll~s~---kk~~~~~vre~q~L~Ra~~Lr~n~~~L~~~sF~~Rk~~~~  124 (290)
                      |++|||.|| ||++||+++++++|++|||++.+++..   ++.+..+.+++++..|++.+|.|++.+++++|+.|+.+++
T Consensus         1 d~~ldp~i~-~~~~P~~i~v~~~~~~~~~~s~l~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~   79 (168)
T PF01956_consen    1 DLVLDPLIR-WVLLPITIVVFLIAILRGLISELLQKFLIDRKMDKYQKRMKEFQKRYRELRKNGDFKKPKKLEKRQMELM   79 (168)
T ss_pred             CccccchHh-hhhcCHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHcCCccCHHHHHHHHHHHH
Confidence            689999999 999999999999999999999999983   4568889999999999999999999999999999999998


Q ss_pred             hcCCccccccCCCCcchhccCCCChhHHHHHHHhhhhhHHhHHHHHHHHHHhhhcceeeeccCCChhhHHHHhhccCCCC
Q 022876          125 NEENGLLHVPKGQAQNAQAQMFSDPNMAMDMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPFPLTQRFRSMLQNGIDLS  204 (290)
Q Consensus       125 ~~~~G~~~~~~~~~~~~~~npm~DP~~Mm~MmKgNm~~~IPq~vIm~WIN~FFSGFVv~KlPFPLT~rFK~MLQrGI~l~  204 (290)
                      +.+.|.                     |++|||+|+.++||+++||+|||+||+|||++|+|||||.+||+|+|||+  +
T Consensus        80 ~~~~~~---------------------~~~~mK~~~~~~v~~i~i~~wi~~~f~g~vv~klPFpl~~~f~~~~qrgl--~  136 (168)
T PF01956_consen   80 EKQQEM---------------------MMMMMKPMFVTMVPQIPIFYWINYFFSGFVVAKLPFPLTGRFKSMLQRGL--E  136 (168)
T ss_pred             HHHHHH---------------------HHHHHHHhHHHHHHHHHHHHHHHHHhhhcceEEeeccccHHHhHHhhcCC--C
Confidence            754431                     89999999999999999999999999999999999999999999999999  9


Q ss_pred             CCCccchhhhHHHHHHHhhhhHHHHHHhCCCC
Q 022876          205 TVDVSYVSSRSWYFLNLFGLRGLFSLILGEEN  236 (290)
Q Consensus       205 dLDvswVSSlSWYFLnlFGLr~vy~LlLG~~n  236 (290)
                      ++|++||||+||||||.||++++++++||++|
T Consensus       137 ~~d~~~~s~i~wYfL~s~~~~~vi~k~lg~~n  168 (168)
T PF01956_consen  137 GLDVSYVSSISWYFLCSFGLRQVIRKLLGENN  168 (168)
T ss_pred             CCcccHhHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999986

Members are predicted to be integral membrane proteins.; GO: 0016020 membrane

>KOG3312 consensus Predicted membrane protein [Function unknown]

Probab=98.85  E-value=9.6e-09  Score=90.17  Aligned_cols=95  Identities=26%  Similarity=0.403  Sum_probs=80.0

Q ss_pred             HHHHhhhhhHHhHHHHHHHHHHhhhcceeeeccC-CChhhHHHHhhccCCCCCC-CccchhhhHHHHHHHhhhhHHHHHH
Q 022876          154 DMMKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPF-PLTQRFRSMLQNGIDLSTV-DVSYVSSRSWYFLNLFGLRGLFSLI  231 (290)
Q Consensus       154 ~MmKgNm~~~IPq~vIm~WIN~FFSGFVv~KlPF-PLT~rFK~MLQrGI~l~dL-DvswVSSlSWYFLnlFGLr~vy~Ll  231 (290)
                      --||.-++.-+--+++++-.|..|-|=||+|||| |+++ -+.|-+||+-.+|. |||++   .-|.||-..+|-..+.+
T Consensus        86 ~kmKsmfaigl~ftal~~~fNSiFeGrVVAkLPF~Pis~-iqglSHRnL~GdD~TDCSfi---FLYiLCtmsiRqNlQK~  161 (186)
T KOG3312|consen   86 FKMKSMFAIGLAFTALLGMFNSIFEGRVVAKLPFTPISI-IQGLSHRNLKGDDMTDCSFI---FLYILCTMSIRQNLQKI  161 (186)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcceeEEecCCcchHH-HhcccccCCCCCCccchHHH---HHHHHHHHHHHHHHHHH
Confidence            3467777777888999999999999999999999 9999 99999999999998 99998   99999999999999999


Q ss_pred             hCCCCCchhHHHHHhhcC--CCCChhh
Q 022876          232 LGEENATDDTQRMMQMSG--FGFDPSK  256 (290)
Q Consensus       232 LG~~naad~~~~m~~~~g--~g~d~~K  256 (290)
                      ||-...    +++..++|  +||+|.|
T Consensus       162 LGfaPs----Raaa~q~~~~~~P~p~k  184 (186)
T KOG3312|consen  162 LGFAPS----RAAAKQGGGFPGPPPSK  184 (186)
T ss_pred             hCcCCc----hhHhhcCCCCCCCCCcc
Confidence            998543    33433433  4666654

>COG1422 Predicted membrane protein [Function unknown]

Probab=95.56  E-value=0.036  Score=50.83  Aligned_cols=74  Identities=19%  Similarity=0.317  Sum_probs=50.4

Q ss_pred             HHhhhhhHHhHHHHHHHHHHhhhcceeeeccC--CChhhHHHHhhccCCCCCCCccchhhhHHHHHHHhhhhHHHHHHhC
Q 022876          156 MKKNLSMIIPQTLTFAWVNFFFSGFVAAKIPF--PLTQRFRSMLQNGIDLSTVDVSYVSSRSWYFLNLFGLRGLFSLILG  233 (290)
Q Consensus       156 mKgNm~~~IPq~vIm~WIN~FFSGFVv~KlPF--PLT~rFK~MLQrGI~l~dLDvswVSSlSWYFLnlFGLr~vy~LlLG  233 (290)
                      +|=-+.-+++.+.+..|+-++-++--..+-|+  -+..=|=.+.+-++-  .--.-|+   -|||||-|+..-+.+.+|+
T Consensus       122 fkPM~~~~v~tI~~F~Wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~gWi---~WYfLcS~~vs~ilrk~l~  196 (201)
T COG1422         122 FKPMLYISVLTIPFFAWLRWFVGTGGYLVSEPNMALPTLFHILYHTAVF--GDFLGWI---GWYFLCSFVVSQILRKVLN  196 (201)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHccCcccccCccchhHHhhhhhhhcccc--ccchHHH---HHHHHHHHHHHHHHHHHHh
Confidence            34333456688888899988877665554443  233335666776662  2234577   9999999999999999986


Q ss_pred             C
Q 022876          234 E  234 (290)
Q Consensus       234 ~  234 (290)
                      -
T Consensus       197 i  197 (201)
T COG1422         197 I  197 (201)
T ss_pred             c
Confidence            4

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00