Citrus Sinensis ID: 022935

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Protein Sequence
MPLTTANFSICPSIFLRRIRVRSPSPKFPPRFSQFSISRPNLTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGFMYYFFSFGYMQCSWELVFGFLVVSLASALVESLPISTKLDDNLTLTITSIAVGSLVF
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHEHHHHHHHHHEHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
mplttanfsicpsiflrrirvrspspkfpprfsqfsisrpnltspsaamllpqnpvlsdVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLcwplfssgprgailasltpGVNIIRMLLVgsgmwkdeATVKSMSrygdrrelltgPLYYAITITLACVIYWRNSPNGIAAICNLcagdgfadvvgrrfgkrklpynqnksiagscamaSAGFLSSIGFMYYFFSFGYMQCSWELVFGFLVVSLASALVEslpistklddnltLTITSIAVGSLVF
Flexible Loop (DISEMBL)
mplttanfsicpsiflRRIRVRSPSPKFPPRFSQFSISRPNLTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGFMYYFFSFGYMQCSWELVFGFLVVSLASALVESLPistklddnltlTITSiavgslvf
Low Complexity Region (SEG)
MPLTTANFSICPSIFLRRIrvrspspkfpprfsqfsISRPNLTSPSAAMLLPQNPVLSDvcasavsaavaascLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLssigfmyyffsfgymQCSWELVFGFLVVSLASALVESLPISTKLDDNLTLTITSIAVGSLVF
Disordered region (IsUnstruct)
*****ANFSICPSIFLRRIRV*****************************LPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGFMYYFFSFGYMQCSWELVFGFLVVSLASALVESLPISTKLDDNLTLTITSIAVGSL**
Disordered Region (DISOPRED)
********SI**************************************MLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGFMYYFFSFGYMQCSWELVFGFLVVSLASALVESLPISTKLDDNLTLTITSIAVGSLVF
Disordered Region (DISEMBL)
MPLTTANFSICPSIFLRRIRVRSPSPKFPPRFSQFSISRPNLTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGFMYYFFSFGYMQCSWELVFGFLVVSLASALVESLPISTKLDDNLTLTITSIAVGSLVF
Disordered Region (DISPRO)
*PLTTANFSICPSIFLRRIRVRSPS**FPP****FSISRPNLTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGFMYYFFSFGYMQCSWELVFGFLVVSLASALVESLPISTKLDDNLTLTITSIAVGSLVF
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPLTTANFSICPSIFLRRIRVRSPSPKFPPRFSQFSISRPNLTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGFMYYFFSFGYMQCSWELVFGFLVVSLASALVESLPISTKLDDNLTLTITSIAVGSLVF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	290	2.2.26 [Sep-21-2011]
Q2N2K0	319	Probable phytol kinase 3,	yes	no	0.844	0.768	0.677	2e-95
Q67ZM7	307	Probable phytol kinase 2,	yes	no	0.972	0.918	0.595	6e-95
Q5N9J9	304	Probable phytol kinase 2,	yes	no	0.841	0.802	0.644	8e-87
Q2N2K1	302	Probable phytol kinase 1,	no	no	0.893	0.857	0.390	1e-53
Q2N2K4	303	Probable phytol kinase, c	N/A	no	0.803	0.768	0.410	4e-48
Q9LZ76	304	Phytol kinase 1, chloropl	no	no	0.817	0.779	0.390	8e-48
Q2N2K3	300	Probable phytol kinase, c	N/A	no	0.810	0.783	0.427	9e-47
Q7XR51	314	Probable phytol kinase 1,	no	no	0.806	0.745	0.412	2e-46
Q2N2K2	292	Probable phytol kinase 2,	no	no	0.765	0.760	0.388	7e-43

>sp|Q2N2K0|PHYK3_SOYBN Probable phytol kinase 3, chloroplastic OS=Glycine max PE=2 SV=1

 Score =  348 bits (894), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 166/245 (67%), Positives = 204/245 (83%)

Query: 45  PSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFM 104
           P  + +L  +P++SDV A+A+S  VA S LRL++ETA+RDLFDQKLNRKLVHISIGLIFM
Sbjct: 74  PPRSTMLHHDPLVSDVYATAISGVVALSFLRLFQETAKRDLFDQKLNRKLVHISIGLIFM 133

Query: 105 LCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYY 164
           LC PLFS+    +  A+L PG+NI RML++G G+ KDEATVKSMSR+GD RELL GPLYY
Sbjct: 134 LCXPLFSTETWASFFAALIPGINIFRMLVIGLGILKDEATVKSMSRFGDYRELLKGPLYY 193

Query: 165 AITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMAS 224
           A TITLA +IYWR SP  IAAICNLCAGDG AD+VGRR G  K+PYN+NKS AGS AMA+
Sbjct: 194 AATITLAAIIYWRTSPISIAAICNLCAGDGMADIVGRRLGGEKIPYNKNKSFAGSIAMAT 253

Query: 225 AGFLSSIGFMYYFFSFGYMQCSWELVFGFLVVSLASALVESLPISTKLDDNLTLTITSIA 284
           AGFL+SIG+M+YF SFG+++ SW+LV GFL+VS+ +A VESLPIST+LDDNLT+ +TSI 
Sbjct: 254 AGFLTSIGYMWYFSSFGFIEGSWKLVLGFLLVSIVTAFVESLPISTELDDNLTVPLTSIL 313

Query: 285 VGSLV 289
           VGS++
Sbjct: 314 VGSII 318

Involved in the activation and reutilization of phytol from chlorophyll degradation in plant metabolism, including tocopherol biosynthesis. Catalyzes the conversion of phytol to phytolmonophosphate (PMP).
Glycine max (taxid: 3847)
EC: 2EC: .EC: 7EC: .EC: -EC: .EC: -

>sp|Q67ZM7|PHYK2_ARATH Probable phytol kinase 2, chloroplastic OS=Arabidopsis thaliana GN=At5g58560 PE=2 SV=2

 Score =  347 bits (890), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 172/289 (59%), Positives = 217/289 (75%), Gaps = 7/289 (2%)

Query: 2   PLTTANFSICPSIFLRRIRVRSPSPKFPPRFSQFSISRPNLTSPSAAMLLPQNPVLSDVC 61
           P + A FS  P     RI   + S +   RF    I + +L    AA++ P+N VLSDVC
Sbjct: 26  PPSLAFFSPIPRFLTVRI---ATSFRSSSRFPATKIRKSSL----AAVMFPENSVLSDVC 78

Query: 62  ASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILAS 121
           A  V++ VA SCL  W E  +R +FDQKL RKLVHI+IGL+FMLCWPLFSSG +GA+ AS
Sbjct: 79  AFGVTSIVAFSCLGFWGEIGKRGIFDQKLIRKLVHINIGLVFMLCWPLFSSGIQGALFAS 138

Query: 122 LTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPN 181
           L PG+NI+RMLL+G G++ DE T+KSMSR+GDRRELL GPLYY ++IT AC+ YW++SP 
Sbjct: 139 LVPGLNIVRMLLLGLGVYHDEGTIKSMSRHGDRRELLKGPLYYVLSITSACIYYWKSSPI 198

Query: 182 GIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGFMYYFFSFG 241
            IA ICNLCAGDG AD+VGRRFG  KLPYN+NKS AGS  MA+AGFL+S+ +MYYF SFG
Sbjct: 199 AIAVICNLCAGDGMADIVGRRFGTEKLPYNKNKSFAGSIGMATAGFLASVAYMYYFASFG 258

Query: 242 YMQCSWELVFGFLVVSLASALVESLPISTKLDDNLTLTITSIAVGSLVF 290
           Y++ S  ++  FLV+S+ASALVESLPIST +DDNLT+++TS   G L+F
Sbjct: 259 YIEDSGGMILRFLVISIASALVESLPISTDIDDNLTISLTSALAGFLLF 307

Involved in the activation and reutilization of phytol from chlorophyll degradation in plant metabolism, including tocopherol biosynthesis. Catalyzes the conversion of phytol to phytolmonophosphate (PMP).

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: -

EC: .

EC: -

>sp|Q5N9J9|PHYK2_ORYSJ Probable phytol kinase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0832000 PE=2 SV=3

 Score =  320 bits (820), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 158/245 (64%), Positives = 194/245 (79%), Gaps = 1/245 (0%)

Query: 47  AAMLLPQNPVLS-DVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFML 105
           AA + P+   L+ D+ ++AV+A VA + LR +EE A+R +F+QKLNRKLVHI+IG++F+L
Sbjct: 60  AAAIPPEASGLAHDLGSAAVTAGVALALLRFFEELAKRGVFEQKLNRKLVHITIGMVFLL 119

Query: 106 CWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYA 165
            WPLFSSG     LA++ PG+NIIRMLL+G G+ K+EA VKSMSR GD RELL GPLYYA
Sbjct: 120 FWPLFSSGSYAPFLAAVAPGINIIRMLLLGLGVMKNEAMVKSMSRSGDPRELLKGPLYYA 179

Query: 166 ITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASA 225
            TIT A  I+WR SP  IA ICNLCAGDG AD+VGRR G+ KLPYN NKS AGS AMA A
Sbjct: 180 TTITFATSIFWRTSPIAIALICNLCAGDGIADIVGRRLGQEKLPYNPNKSYAGSIAMALA 239

Query: 226 GFLSSIGFMYYFFSFGYMQCSWELVFGFLVVSLASALVESLPISTKLDDNLTLTITSIAV 285
           GF++SIG+M+YF SFG+++ SW L FGFLVVS+ +ALVES PIST LDDNLT+ +TS  V
Sbjct: 240 GFMASIGYMHYFQSFGFIEESWSLAFGFLVVSVTAALVESHPISTHLDDNLTVPLTSFLV 299

Query: 286 GSLVF 290
           GSLVF
Sbjct: 300 GSLVF 304

Involved in the activation and reutilization of phytol from chlorophyll degradation in plant metabolism, including tocopherol biosynthesis. Catalyzes the conversion of phytol to phytolmonophosphate (PMP).

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: -

EC: .

EC: -

>sp|Q2N2K1|PHYK1_SOYBN Probable phytol kinase 1, chloroplastic OS=Glycine max PE=2 SV=1

 Score =  210 bits (534), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 105/269 (39%), Positives = 162/269 (60%), Gaps = 10/269 (3%)

Query: 25  SPKFPP--RFSQFSISRPNLTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETAR 82
           SP  PP  R  Q     P    P A        +L +  A+        + +R ++E  R
Sbjct: 39  SPGVPPAVRLDQ---RLPRFVVPGAG----AEDLLYNAGATVGVLGGGYALVRAFDELTR 91

Query: 83  RDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDE 142
           R++  Q L+RKLVHI  GL+F++ WP+FS+ P+    A+  P VN +R+L+ G  +  DE
Sbjct: 92  RNILQQGLSRKLVHILSGLLFLVSWPIFSNSPKARYFAAFVPLVNCLRLLVNGLSLASDE 151

Query: 143 ATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRR 202
             +KS++R GD  ELL GPLYY + + L+ +++WR SP G+ ++  +CAGDG AD++GRR
Sbjct: 152 GLIKSVTREGDPLELLRGPLYYVLILILSALVFWRESPIGVISLAMMCAGDGIADIIGRR 211

Query: 203 FGKRKLPYNQNKSIAGSCAMASAGFLSSIGFMYYFFSFGYMQCSWELVFGFLV-VSLASA 261
           +G  K+PYN++KS+AGS +M   GFL SIG +YY+   G++Q  W      +  +S  + 
Sbjct: 212 YGSMKIPYNEHKSLAGSMSMLVFGFLVSIGMLYYYSVLGHVQLDWASTLPRVAFISFVAT 271

Query: 262 LVESLPISTKLDDNLTLTITSIAVGSLVF 290
           LVESLPI+  +DDN+++ + ++AV    F
Sbjct: 272 LVESLPITKVVDDNISVPLATMAVAFFTF 300

Involved in the activation and reutilization of phytol from chlorophyll degradation in plant metabolism, including tocopherol biosynthesis. Catalyzes the conversion of phytol to phytolmonophosphate (PMP).

Glycine max (taxid: 3847)

EC: 2

EC: .

EC: 7

EC: .

EC: -

EC: .

EC: -

>sp|Q2N2K4|PHYK_MAIZE Probable phytol kinase, chloroplastic OS=Zea mays PE=2 SV=1

 Score =  191 bits (486), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 96/234 (41%), Positives = 151/234 (64%), Gaps = 1/234 (0%)

Query: 58  SDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGA 117
            D   + +  A A S +R+++E   R L ++ L+RK+VH+  G++FM  WPLFS+     
Sbjct: 62  QDGAVTVLITAGAYSLVRVFDELTERRLIEKSLSRKVVHVLSGVLFMSSWPLFSNSTEAR 121

Query: 118 ILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWR 177
             A++ P +N +R+L+ G  ++ DEA VKS++R G   ELL GPLYY + +  + +++WR
Sbjct: 122 YFAAVVPFLNSMRLLIYGLRLYTDEALVKSVTREGKPEELLRGPLYYVLVLLFSVLVFWR 181

Query: 178 NSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGFMYYF 237
            SP GI ++  +  GDGFAD+VGRR+G  KLP+N+ KS AGS +M  +GFL S   M YF
Sbjct: 182 ESPIGIVSLSMMSGGDGFADIVGRRYGSAKLPFNRKKSWAGSISMFISGFLLSAMMMLYF 241

Query: 238 FSFGYMQCSWELVFGFL-VVSLASALVESLPISTKLDDNLTLTITSIAVGSLVF 290
            S GY+   WE   G L +V+LA+ +VE +P++  +DDN+++ + ++ V  L+F
Sbjct: 242 SSLGYIDVIWEEALGKLALVALAATVVECVPVTEVVDDNISVPLATMLVAFLLF 295

Involved in the activation and reutilization of phytol from chlorophyll degradation in plant metabolism, including tocopherol biosynthesis. Catalyzes the conversion of phytol to phytolmonophosphate (PMP).

Zea mays (taxid: 4577)

EC: 2

EC: .

EC: 7

EC: .

EC: -

EC: .

EC: -

>sp|Q9LZ76|PHYK1_ARATH Phytol kinase 1, chloroplastic OS=Arabidopsis thaliana GN=VTE5 PE=1 SV=1

 Score =  190 bits (483), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 93/238 (39%), Positives = 145/238 (60%), Gaps = 1/238 (0%)

Query: 54  NPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSG 113
           N +L DV A+      A + +  +E   +R++  Q L+RKLVHI  GL+F+L WP+FS  
Sbjct: 65  NSLLHDVGATVAVLGGAYALVLSFESLTKRNVIQQSLSRKLVHILSGLLFVLAWPIFSGS 124

Query: 114 PRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACV 173
                 A+  P VN +R+++ G  +  +   +KS++R G   ELL GPL+Y + +  + V
Sbjct: 125 TEARYFAAFVPLVNGLRLVINGLSISPNSMLIKSVTREGRAEELLKGPLFYVLALLFSAV 184

Query: 174 IYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGF 233
            +WR SP G+ ++  +C GDG AD++GR+FG  K+PYN  KS AGS +M   GF  SI  
Sbjct: 185 FFWRESPIGMISLAMMCGGDGIADIMGRKFGSTKIPYNPRKSWAGSISMFIFGFFISIAL 244

Query: 234 MYYFFSFGYMQCSWELVFGFL-VVSLASALVESLPISTKLDDNLTLTITSIAVGSLVF 290
           +YY+ S GY+  +WE     + +VS+ + +VESLPI+ +LDDN+++ + +I    L F
Sbjct: 245 LYYYSSLGYLHMNWETTLQRVAMVSMVATVVESLPITDQLDDNISVPLATILAAYLSF 302

Involved in the activation and reutilization of phytol from chlorophyll degradation in plant metabolism, including tocopherol biosynthesis. Catalyzes the conversion of phytol to phytolmonophosphate (PMP).

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: -

EC: .

EC: -

>sp|Q2N2K3|PHYK_WHEAT Probable phytol kinase, chloroplastic OS=Triticum aestivum PE=2 SV=1

 Score =  187 bits (474), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 101/236 (42%), Positives = 150/236 (63%), Gaps = 1/236 (0%)

Query: 56  VLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPR 115
           +L D  A+ +  A A S +R ++    R L  Q L+RK+VH+  G+ FM  WPLFS+   
Sbjct: 60  LLRDGGATLLVTAGAYSLVRAFDALTERRLVQQSLSRKVVHVLSGVFFMASWPLFSNSTS 119

Query: 116 GAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIY 175
               A++ P +N +R+L  G G + DEA VKS++R G R ELL GPLYY I + +  +++
Sbjct: 120 ARFFAAVVPFLNCVRLLTYGLGFYSDEALVKSVTREGKREELLRGPLYYVIVLLIIVLVF 179

Query: 176 WRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGFMY 235
           WR+SP GI ++  +  GDGFAD+VGRRFG  KLP+N+ KS  GS AM  +GFL S   + 
Sbjct: 180 WRDSPIGIVSLSMMSGGDGFADIVGRRFGSLKLPFNKKKSWVGSAAMFISGFLLSALMLS 239

Query: 236 YFFSFGYMQCSWELVFGFLV-VSLASALVESLPISTKLDDNLTLTITSIAVGSLVF 290
           YF   GY+  SW+   G LV V+LA+ +VE +P++  +DDN+++ + ++ V  L+F
Sbjct: 240 YFSWLGYIHVSWDQALGKLVLVALAATVVECIPVTDVVDDNISVPLATMLVAFLLF 295

Involved in the activation and reutilization of phytol from chlorophyll degradation in plant metabolism, including tocopherol biosynthesis. Catalyzes the conversion of phytol to phytolmonophosphate (PMP).

Triticum aestivum (taxid: 4565)

EC: 2

EC: .

EC: 7

EC: .

EC: -

EC: .

EC: -

>sp|Q7XR51|PHYK1_ORYSJ Probable phytol kinase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0670700 PE=2 SV=1

 Score =  186 bits (472), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 97/235 (41%), Positives = 149/235 (63%), Gaps = 1/235 (0%)

Query: 57  LSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRG 116
           L D  A+ +  A A S +R ++    R L +Q L+RK+VH+  G++FM  WPLFS+    
Sbjct: 74  LRDCAATLLITAGAYSLVRAFDGLTARRLIEQNLSRKIVHVLSGVLFMSSWPLFSNSTEA 133

Query: 117 AILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYW 176
              A++ P +N IR+L  G  +  DEA VKS++R G   ELL GPLYY I + ++ +++W
Sbjct: 134 RFFAAIVPLLNCIRLLTYGLRLSTDEALVKSVTREGKPEELLRGPLYYVIVLLVSVLVFW 193

Query: 177 RNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGFMYY 236
           R SP GI ++  +  GDGFAD+VGRR+G  KLP+N+NKS  GS +M  +GFL S   ++Y
Sbjct: 194 RQSPIGIVSLSMMSGGDGFADIVGRRYGSAKLPFNENKSWIGSISMFISGFLLSALMLFY 253

Query: 237 FFSFGYMQCSWELVFGFL-VVSLASALVESLPISTKLDDNLTLTITSIAVGSLVF 290
           F   GY    W+L  G L +V+LA+ +VE +P++  +DDN+++ + ++    L+F
Sbjct: 254 FSCLGYFTVCWDLALGKLALVALAATVVECIPVNDVVDDNISVPLATMLAAYLLF 308

Involved in the activation and reutilization of phytol from chlorophyll degradation in plant metabolism, including tocopherol biosynthesis. Catalyzes the conversion of phytol to phytolmonophosphate (PMP).

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: -

EC: .

EC: -

>sp|Q2N2K2|PHYK2_SOYBN Probable phytol kinase 2, chloroplastic OS=Glycine max PE=2 SV=1

 Score =  174 bits (441), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 91/234 (38%), Positives = 144/234 (61%), Gaps = 12/234 (5%)

Query: 58  SDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGA 117
            D   + +  A A S +R+++E   R L ++ L+RK+VH+  G++FM  WPLFS+     
Sbjct: 62  QDGAVTVLITAGAYSLVRVFDELTERRLIEKSLSRKVVHVLSGVLFMSSWPLFSNSTEAR 121

Query: 118 ILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWR 177
             A++ P +N +R+L+ G  ++ DEA            ELL GPLYY + +  + +++WR
Sbjct: 122 YFAAVVPFLNSMRLLIYGLRLYTDEAL-----------ELLRGPLYYVLVLLFSVLVFWR 170

Query: 178 NSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGFMYYF 237
            SP GI ++  +  GDGFAD+VGRR+G  KLP+N+ KS AGS +M  +GFL S   M YF
Sbjct: 171 ESPIGIVSLSMMSGGDGFADIVGRRYGSAKLPFNRKKSWAGSISMFISGFLLSAMMMLYF 230

Query: 238 FSFGYMQCSWELVFGFL-VVSLASALVESLPISTKLDDNLTLTITSIAVGSLVF 290
            S GY+   WE   G L +V+LA+ +VE +P++  +DDN+++ + ++ V  L+F
Sbjct: 231 SSLGYIDVIWEEALGKLALVALAATVVECVPVTEVVDDNISVPLATMLVAFLLF 284

Involved in the activation and reutilization of phytol from chlorophyll degradation in plant metabolism, including tocopherol biosynthesis. Catalyzes the conversion of phytol to phytolmonophosphate (PMP).

Glycine max (taxid: 3847)

EC: 2

EC: .

EC: 7

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	290
255551200	304	Phytol kinase 1, chloroplast precursor,	0.858	0.819	0.738	1e-106
224103907	241	predicted protein [Populus trichocarpa]	0.831	1.0	0.742	1e-105
224103909	241	predicted protein [Populus trichocarpa]	0.831	1.0	0.739	1e-102
224059822	244	predicted protein [Populus trichocarpa]	0.841	1.0	0.725	3e-99
359478755	309	PREDICTED: probable phytol kinase 2, chl	0.906	0.851	0.666	5e-98
449455009	322	PREDICTED: probable phytol kinase 2, chl	0.910	0.819	0.674	1e-96
255648008	318	unknown [Glycine max]	0.844	0.770	0.677	2e-94
21593148	307	unknown [Arabidopsis thaliana]	0.972	0.918	0.598	8e-94
363806680	319	probable phytol kinase 3, chloroplastic	0.844	0.768	0.677	1e-93
325516266	293	phytol kinase [Solanum pennellii]	0.931	0.921	0.612	1e-93

>gi|255551200|ref|XP_002516647.1| Phytol kinase 1, chloroplast precursor, putative [Ricinus communis] gi|223544219|gb|EEF45742.1| Phytol kinase 1, chloroplast precursor, putative [Ricinus communis]

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/249 (73%), Positives = 219/249 (87%)

Query: 42  LTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGL 101
           L S   A +L QNP++SD+CA+ +S A+A S LRLW+ETA R +FDQKLNRKLVHISIGL
Sbjct: 56  LRSAVRATMLHQNPIVSDLCATGLSGAIALSVLRLWKETAIRGIFDQKLNRKLVHISIGL 115

Query: 102 IFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGP 161
           +FMLCWPLFSSG +GAILA+LTPGVNI RMLL+G G+WKDEATVKSMSR+GD RELL GP
Sbjct: 116 VFMLCWPLFSSGHQGAILAALTPGVNIFRMLLLGLGIWKDEATVKSMSRFGDHRELLKGP 175

Query: 162 LYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCA 221
           LYYA+TITLAC IYWR SP  IAAICNLCAGDG AD+VGRRFG++K+PYN++KSIAGS A
Sbjct: 176 LYYALTITLACAIYWRTSPIAIAAICNLCAGDGIADIVGRRFGRQKIPYNRDKSIAGSIA 235

Query: 222 MASAGFLSSIGFMYYFFSFGYMQCSWELVFGFLVVSLASALVESLPISTKLDDNLTLTIT 281
           MA AGF++S+ FMYYF SFGY++ S+E++ GFLVVSLAS LVESLPIST+LDDNLT+T+T
Sbjct: 236 MALAGFIASVMFMYYFASFGYLRKSYEMILGFLVVSLASTLVESLPISTELDDNLTVTVT 295

Query: 282 SIAVGSLVF 290
           SI +G+LVF
Sbjct: 296 SILLGTLVF 304

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103907|ref|XP_002313238.1| predicted protein [Populus trichocarpa] gi|222849646|gb|EEE87193.1| predicted protein [Populus trichocarpa]

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 179/241 (74%), Positives = 213/241 (88%)

Query: 50  LLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPL 109
           +L QNPV+SD+ A+ +S  +A S LR + ET +R +FDQKLNRKLVHISIGL+FMLCWP+
Sbjct: 1   MLHQNPVVSDLIATGLSGTIALSILRFFAETTKRHVFDQKLNRKLVHISIGLVFMLCWPI 60

Query: 110 FSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITIT 169
           FSSG RGA+ A+ TPGVNII+MLL+GSGMWKDEATVKSMSR+GDRRELL GPLYYA+TIT
Sbjct: 61  FSSGRRGALFAAFTPGVNIIQMLLIGSGMWKDEATVKSMSRFGDRRELLKGPLYYALTIT 120

Query: 170 LACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLS 229
            AC IYWR SP  IAAICNLCAGDG AD+VGRRFG++K+PYN+NKSIAGS AMA +GF++
Sbjct: 121 GACAIYWRTSPVAIAAICNLCAGDGMADIVGRRFGRQKIPYNKNKSIAGSVAMALSGFVA 180

Query: 230 SIGFMYYFFSFGYMQCSWELVFGFLVVSLASALVESLPISTKLDDNLTLTITSIAVGSLV 289
           S+GFMYYF SFGY+Q SWE++ GFLVVSLASA VESLPIST+LDDNLT+T+TSI +G+LV
Sbjct: 181 SVGFMYYFASFGYVQKSWEMLLGFLVVSLASAFVESLPISTELDDNLTVTLTSILLGNLV 240

Query: 290 F 290
           F
Sbjct: 241 F 241

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103909|ref|XP_002313239.1| predicted protein [Populus trichocarpa] gi|224103911|ref|XP_002313240.1| predicted protein [Populus trichocarpa] gi|222849647|gb|EEE87194.1| predicted protein [Populus trichocarpa] gi|222849648|gb|EEE87195.1| predicted protein [Populus trichocarpa]

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 179/242 (73%), Positives = 213/242 (88%), Gaps = 1/242 (0%)

Query: 49  MLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWP 108
           M    NPV+SD+C++ VSA V  + L+LW+ETA+  L DQKLNRKLVHISIGL+FMLCWP
Sbjct: 1   MWTGSNPVVSDLCSAVVSAVVIFAFLQLWKETAKHGL-DQKLNRKLVHISIGLVFMLCWP 59

Query: 109 LFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITI 168
           +FSSG RGA+ A+ TPGVNII++LL+GSGMWKDEATVKSMSR+GDRRELL GPLYYA+TI
Sbjct: 60  IFSSGRRGALFAAFTPGVNIIQILLIGSGMWKDEATVKSMSRFGDRRELLKGPLYYALTI 119

Query: 169 TLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFL 228
           T AC IYWR SP  IAAICNLCAGDG AD+VGRRFG++K+PYN+NKSIAGS AMA +GF+
Sbjct: 120 TGACAIYWRTSPVAIAAICNLCAGDGMADIVGRRFGRQKIPYNKNKSIAGSVAMALSGFV 179

Query: 229 SSIGFMYYFFSFGYMQCSWELVFGFLVVSLASALVESLPISTKLDDNLTLTITSIAVGSL 288
           +S+GFMYYF SFGY+Q SWE++ GFLVVSLASA VESLPIST+LDDNLT+T+TSI +G+L
Sbjct: 180 ASVGFMYYFASFGYVQKSWEMLLGFLVVSLASAFVESLPISTELDDNLTVTLTSILLGNL 239

Query: 289 VF 290
           VF
Sbjct: 240 VF 241

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224059822|ref|XP_002299996.1| predicted protein [Populus trichocarpa] gi|222847254|gb|EEE84801.1| predicted protein [Populus trichocarpa]

 Score =  367 bits (942), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 177/244 (72%), Positives = 214/244 (87%)

Query: 47  AAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLC 106
           A  +L QNPV+SD+ A+ +S  +A S LR +EETA+R +FDQKLNRKL+HISIGL+FMLC
Sbjct: 1   AVAMLHQNPVVSDLIATGLSGTIALSFLRSFEETAKRHIFDQKLNRKLMHISIGLVFMLC 60

Query: 107 WPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAI 166
           WP+FSSG RGA+LA+  PG+NIIRMLL+GSGMWKDEATVKSMSR+GDRRELL GPLYYA+
Sbjct: 61  WPMFSSGLRGALLAACIPGLNIIRMLLIGSGMWKDEATVKSMSRFGDRRELLKGPLYYAL 120

Query: 167 TITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAG 226
           TIT+AC IYWR SP  IAAICNLCAGDG AD+VGRR G +K+PYN+NKSIAGS AMA AG
Sbjct: 121 TITVACAIYWRTSPVAIAAICNLCAGDGIADIVGRRLGSQKIPYNRNKSIAGSVAMALAG 180

Query: 227 FLSSIGFMYYFFSFGYMQCSWELVFGFLVVSLASALVESLPISTKLDDNLTLTITSIAVG 286
           FL+S+GFM YF +FGY+Q SWE++ GFL+VSLAS+ VESLPIST+LDDNLT+T+TS+ +G
Sbjct: 181 FLASLGFMVYFSAFGYVQKSWEMILGFLIVSLASSFVESLPISTELDDNLTVTLTSLLLG 240

Query: 287 SLVF 290
           +LVF
Sbjct: 241 NLVF 244

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478755|ref|XP_002278580.2| PREDICTED: probable phytol kinase 2, chloroplastic-like [Vitis vinifera]

 Score =  363 bits (931), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 182/273 (66%), Positives = 220/273 (80%), Gaps = 10/273 (3%)

Query: 18  RIRVRSPSPKFPPRFSQFSISRPNLTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLW 77
           R+R R P+           ++R  LTSPSA ++LPQNPV  D+CA+A++ A A S LR W
Sbjct: 47  RVRFRVPNG---------GLARGGLTSPSA-LMLPQNPVAGDICAAALTGAAALSLLRFW 96

Query: 78  EETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSG 137
            E A+R  FDQ + RKLVHIS+GL+FML WPLFSSG +GA+LA+L PGVNIIRMLL+G G
Sbjct: 97  GEIAKRGFFDQTVGRKLVHISVGLVFMLFWPLFSSGRQGAVLAALIPGVNIIRMLLLGLG 156

Query: 138 MWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFAD 197
           +WKDEA VKSMSR+GD RELL GPLYYA  ITLAC IYWR SP  IAAICNLCAGDG AD
Sbjct: 157 IWKDEAIVKSMSRHGDHRELLKGPLYYASAITLACAIYWRTSPIAIAAICNLCAGDGLAD 216

Query: 198 VVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGFMYYFFSFGYMQCSWELVFGFLVVS 257
           +VGRRFG +K+PYN+NKS +GS AMA AGFL+SIG+M+YF SFG++Q SWE+VFGFLVVS
Sbjct: 217 LVGRRFGIQKIPYNRNKSFSGSLAMAVAGFLASIGYMHYFASFGFIQESWEMVFGFLVVS 276

Query: 258 LASALVESLPISTKLDDNLTLTITSIAVGSLVF 290
           L S LVESLPIS++LDDNLT+ +TS+ +G+LVF
Sbjct: 277 LGSTLVESLPISSELDDNLTIPVTSLLLGTLVF 309

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455009|ref|XP_004145246.1| PREDICTED: probable phytol kinase 2, chloroplastic-like [Cucumis sativus] gi|449472865|ref|XP_004153718.1| PREDICTED: probable phytol kinase 2, chloroplastic-like [Cucumis sativus] gi|449530855|ref|XP_004172407.1| PREDICTED: probable phytol kinase 2, chloroplastic-like [Cucumis sativus]

 Score =  358 bits (919), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 180/267 (67%), Positives = 211/267 (79%), Gaps = 3/267 (1%)

Query: 24  PSPKFPPRFSQFSISRPNLTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARR 83
           PSP F  RF   S  R      SA M  P+NPV+SD+CA+A+S+ VA S L+LW ETA+R
Sbjct: 59  PSPTFSLRFP--SKIRRKHCPVSAVMFFPENPVVSDICATALSSGVALSLLQLWAETAKR 116

Query: 84  DLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEA 143
            L DQKLNRKLVHISIGL FMLCWP+FSSG +GAILASL PG N++RMLL+G G+ KDEA
Sbjct: 117 GL-DQKLNRKLVHISIGLAFMLCWPMFSSGYQGAILASLIPGANVMRMLLLGFGILKDEA 175

Query: 144 TVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRF 203
           T+KSMSRYGD RELL GPLYY  TIT  C+ YWR SP  IA ICNLCAGDG AD+VGRRF
Sbjct: 176 TLKSMSRYGDYRELLKGPLYYVATITFVCIFYWRTSPISIALICNLCAGDGLADIVGRRF 235

Query: 204 GKRKLPYNQNKSIAGSCAMASAGFLSSIGFMYYFFSFGYMQCSWELVFGFLVVSLASALV 263
           G  K+ YN+NKS+AGS AMA+AGFL+SIG+MYYF  FGY++ S  +   FL+VSLASALV
Sbjct: 236 GSEKIFYNKNKSLAGSVAMATAGFLASIGYMYYFSLFGYVEASVGMAMRFLIVSLASALV 295

Query: 264 ESLPISTKLDDNLTLTITSIAVGSLVF 290
           ESLPIST++DDNLT+ +TS  VGSLVF
Sbjct: 296 ESLPISTEIDDNLTVPLTSFLVGSLVF 322

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255648008|gb|ACU24460.1| unknown [Glycine max]

 Score =  351 bits (901), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 166/245 (67%), Positives = 204/245 (83%)

Query: 45  PSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFM 104
           P  + +L  +P++SDV A+A+S  VA S LRL++ETA+RDLFDQKLNRKLVHISIGLIFM
Sbjct: 73  PPRSTMLHHDPLVSDVYATAISGVVALSFLRLFQETAKRDLFDQKLNRKLVHISIGLIFM 132

Query: 105 LCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYY 164
           LCWPLFS+    +  A+L PG+NI RML++G G+ KDEATVKSMSR+GD RELL GPLYY
Sbjct: 133 LCWPLFSTETWASFFAALIPGINIFRMLVIGLGILKDEATVKSMSRFGDYRELLKGPLYY 192

Query: 165 AITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMAS 224
           A TITLA +IYWR SP  IAAICNLCAGDG AD+VGRR G  K+PYN+NKS AGS AMA+
Sbjct: 193 AATITLAAIIYWRTSPISIAAICNLCAGDGMADIVGRRLGGEKIPYNKNKSFAGSIAMAT 252

Query: 225 AGFLSSIGFMYYFFSFGYMQCSWELVFGFLVVSLASALVESLPISTKLDDNLTLTITSIA 284
           AGFL+SIG+M+YF SFG+++ SW+L  GFL+VS+ +A VESLPIST+LDDNLT+ +TSI 
Sbjct: 253 AGFLTSIGYMWYFSSFGFIEGSWKLALGFLLVSIVTAFVESLPISTELDDNLTVPLTSIL 312

Query: 285 VGSLV 289
           VGS++
Sbjct: 313 VGSII 317

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21593148|gb|AAM65097.1| unknown [Arabidopsis thaliana]

 Score =  349 bits (896), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 173/289 (59%), Positives = 218/289 (75%), Gaps = 7/289 (2%)

Query: 2   PLTTANFSICPSIFLRRIRVRSPSPKFPPRFSQFSISRPNLTSPSAAMLLPQNPVLSDVC 61
           P + A FS  P     RI   + S +   RF    I + +L    AA++ P+N VLSDVC
Sbjct: 26  PPSLAFFSPIPRFLTVRI---ATSFRSSSRFPATKIRKSSL----AAVMFPENSVLSDVC 78

Query: 62  ASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILAS 121
           A  V++ VA SCL  W E  +R +FDQKL RKLVHI+IGL+FMLCWPLFSSG +GA+ AS
Sbjct: 79  AFGVTSIVAFSCLGFWGEIGKRGIFDQKLIRKLVHINIGLVFMLCWPLFSSGIQGALFAS 138

Query: 122 LTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPN 181
           L PG+NI+RMLL+G G++ DE T+KSMSR+GDRRELL GPLYY ++IT AC+ YW++SP 
Sbjct: 139 LVPGLNIVRMLLLGLGVYHDEGTIKSMSRHGDRRELLKGPLYYVLSITSACIYYWKSSPI 198

Query: 182 GIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGFMYYFFSFG 241
            IA ICNLCAGDG AD+VGRRFG  KLPYN+NKS AGS  MA+AGFL+S+G+MYYF SFG
Sbjct: 199 AIAVICNLCAGDGMADIVGRRFGTEKLPYNKNKSFAGSIGMATAGFLASVGYMYYFASFG 258

Query: 242 YMQCSWELVFGFLVVSLASALVESLPISTKLDDNLTLTITSIAVGSLVF 290
           Y++ S  ++  FLV+S+ASALVESLPIST +DDNLT+++TS   G L+F
Sbjct: 259 YIEDSGGMILRFLVISIASALVESLPISTDIDDNLTISLTSALAGFLLF 307

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363806680|ref|NP_001242263.1| probable phytol kinase 3, chloroplastic [Glycine max] gi|90185110|sp|Q2N2K0.1|PHYK3_SOYBN RecName: Full=Probable phytol kinase 3, chloroplastic; Flags: Precursor gi|76443939|gb|ABA42677.1| phytol kinase [Glycine max]

 Score =  348 bits (894), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 166/245 (67%), Positives = 204/245 (83%)

Query: 45  PSAAMLLPQNPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFM 104
           P  + +L  +P++SDV A+A+S  VA S LRL++ETA+RDLFDQKLNRKLVHISIGLIFM
Sbjct: 74  PPRSTMLHHDPLVSDVYATAISGVVALSFLRLFQETAKRDLFDQKLNRKLVHISIGLIFM 133

Query: 105 LCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYY 164
           LC PLFS+    +  A+L PG+NI RML++G G+ KDEATVKSMSR+GD RELL GPLYY
Sbjct: 134 LCXPLFSTETWASFFAALIPGINIFRMLVIGLGILKDEATVKSMSRFGDYRELLKGPLYY 193

Query: 165 AITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMAS 224
           A TITLA +IYWR SP  IAAICNLCAGDG AD+VGRR G  K+PYN+NKS AGS AMA+
Sbjct: 194 AATITLAAIIYWRTSPISIAAICNLCAGDGMADIVGRRLGGEKIPYNKNKSFAGSIAMAT 253

Query: 225 AGFLSSIGFMYYFFSFGYMQCSWELVFGFLVVSLASALVESLPISTKLDDNLTLTITSIA 284
           AGFL+SIG+M+YF SFG+++ SW+LV GFL+VS+ +A VESLPIST+LDDNLT+ +TSI 
Sbjct: 254 AGFLTSIGYMWYFSSFGFIEGSWKLVLGFLLVSIVTAFVESLPISTELDDNLTVPLTSIL 313

Query: 285 VGSLV 289
           VGS++
Sbjct: 314 VGSII 318

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|325516266|gb|ADZ24711.1| phytol kinase [Solanum pennellii]

 Score =  348 bits (894), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 166/271 (61%), Positives = 209/271 (77%), Gaps = 1/271 (0%)

Query: 20  RVRSPSPKFPPRFSQFSISRPNLTSPSAAM-LLPQNPVLSDVCASAVSAAVAASCLRLWE 78
           R+ S    F   F +    R + T       +  +N ++ D+ A+A+S  +A S LR WE
Sbjct: 22  RLFSTKKGFNLGFQKLKTRRLHRTKVVVHFAMFSENLLIGDLIATALSGGIALSILRFWE 81

Query: 79  ETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGM 138
           ETA+R +FDQK NRKLVHISIGL+FMLCWP+FSSG +GAILA+  PG+NII+M L+G G+
Sbjct: 82  ETAKRGVFDQKTNRKLVHISIGLVFMLCWPMFSSGQQGAILAAFIPGLNIIKMFLLGLGI 141

Query: 139 WKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADV 198
           WKD+ATVKSMSR+GD RELL GPLYYA++IT AC IYWR SP  I  ICNLCAGDG AD+
Sbjct: 142 WKDDATVKSMSRFGDHRELLKGPLYYALSITCACAIYWRYSPISIGLICNLCAGDGIADI 201

Query: 199 VGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGFMYYFFSFGYMQCSWELVFGFLVVSL 258
           VGRRFGK+KLPYN+NKS AGS AMA+AG L+SIGF++YF  FGY+Q + + V GFL +SL
Sbjct: 202 VGRRFGKQKLPYNKNKSFAGSIAMAAAGLLASIGFLHYFSLFGYIQVNSKTVLGFLFISL 261

Query: 259 ASALVESLPISTKLDDNLTLTITSIAVGSLV 289
           A+ALVES P+S++LDDNLT+ +TS+ VGSLV
Sbjct: 262 AAALVESHPLSSELDDNLTVPLTSVLVGSLV 292

Source: Solanum pennellii

Species: Solanum pennellii

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	290
TAIR|locus:2178768	307	FOLK "AT5G58560" [Arabidopsis	0.851	0.804	0.582	1.2e-74
TAIR|locus:2184447	304	VTE5 "AT5G04490" [Arabidopsis	0.817	0.779	0.348	1.8e-39
DICTYBASE|DDB_G0272380	223	DDB_G0272380 [Dictyostelium di	0.689	0.896	0.360	1.8e-25

TAIR|locus:2178768 FOLK "AT5G58560" [Arabidopsis thaliana (taxid:3702)]

 Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
 Identities = 144/247 (58%), Positives = 178/247 (72%)

Query:    44 SPSAAMLLPQNPVLSDXXXXXXXXXXXXXXLRLWEETARRDLFDQKLNRKLVHISIGLIF 103
             S  AA++ P+N VLSD              L  W E  +R +FDQKL RKLVHI+IGL+F
Sbjct:    61 SSLAAVMFPENSVLSDVCAFGVTSIVAFSCLGFWGEIGKRGIFDQKLIRKLVHINIGLVF 120

Query:   104 MLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLY 163
             MLCWPLFSSG +GA+ ASL PG+NI+RMLL+G G++ DE T+KSMSR+GDRRELL GPLY
Sbjct:   121 MLCWPLFSSGIQGALFASLVPGLNIVRMLLLGLGVYHDEGTIKSMSRHGDRRELLKGPLY 180

Query:   164 YAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMA 223
             Y ++IT AC+ YW++SP  IA ICNLCAGDG AD+VGRRFG  KLPYN+NKS AGS  MA
Sbjct:   181 YVLSITSACIYYWKSSPIAIAVICNLCAGDGMADIVGRRFGTEKLPYNKNKSFAGSIGMA 240

Query:   224 SAGFLXXXXXXXXXXXXXXXQCSWELVFGFLVVSLASALVESLPISTKLDDNLTLTITSI 283
             +AGFL               + S  ++  FLV+S+ASALVESLPIST +DDNLT+++TS 
Sbjct:   241 TAGFLASVAYMYYFASFGYIEDSGGMILRFLVISIASALVESLPISTDIDDNLTISLTSA 300

Query:   284 AVGSLVF 290
               G L+F
Sbjct:   301 LAGFLLF 307

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=ISS

GO:0008654 "phospholipid biosynthetic process" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006720 "isoprenoid metabolic process" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

GO:0016487 "farnesol metabolic process" evidence=IMP

GO:0048440 "carpel development" evidence=IMP

GO:0052668 "farnesol kinase activity" evidence=IDA

GO:0052669 "CTP:2-trans,-6-trans-farnesol kinase activity" evidence=IDA

GO:0052670 "geraniol kinase activity" evidence=IDA

GO:0052671 "geranylgeraniol kinase activity" evidence=IDA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

TAIR|locus:2184447 VTE5 "AT5G04490" [Arabidopsis thaliana (taxid:3702)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 83/238 (34%), Positives = 130/238 (54%)

Query:    54 NPVLSDXXXXXXXXXXXXXXLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSG 113
             N +L D              +  +E   +R++  Q L+RKLVHI  GL+F+L WP+FS  
Sbjct:    65 NSLLHDVGATVAVLGGAYALVLSFESLTKRNVIQQSLSRKLVHILSGLLFVLAWPIFSGS 124

Query:   114 PRGAILASLTPGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACV 173
                   A+  P VN +R+++ G  +  +   +KS++R G   ELL GPL+Y + +  + V
Sbjct:   125 TEARYFAAFVPLVNGLRLVINGLSISPNSMLIKSVTREGRAEELLKGPLFYVLALLFSAV 184

Query:   174 IYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLXXXXX 233
              +WR SP G+ ++  +C GDG AD++GR+FG  K+PYN  KS AGS +M   GF      
Sbjct:   185 FFWRESPIGMISLAMMCGGDGIADIMGRKFGSTKIPYNPRKSWAGSISMFIFGFFISIAL 244

Query:   234 XXXXXXXXXXQCSWELVFGFL-VVSLASALVESLPISTKLDDNLTLTITSIAVGSLVF 290
                         +WE     + +VS+ + +VESLPI+ +LDDN+++ + +I    L F
Sbjct:   245 LYYYSSLGYLHMNWETTLQRVAMVSMVATVVESLPITDQLDDNISVPLATILAAYLSF 302

GO:0004605 "phosphatidate cytidylyltransferase activity" evidence=ISS

GO:0008654 "phospholipid biosynthetic process" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010189 "vitamin E biosynthetic process" evidence=IMP

GO:0010276 "phytol kinase activity" evidence=IDA

DICTYBASE|DDB_G0272380 DDB_G0272380 [Dictyostelium discoideum (taxid:44689)]

 Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
 Identities = 74/205 (36%), Positives = 107/205 (52%)

Query:    86 FDQKLNRKLVHISIGLIFMLCWPLFSS-GPRGAILASLTPGVNIIRMLLVGSGMWKDEAT 144
             F Q L +  V  S G+I++L W +F        I+  L P +   +  L+G G+  D+ T
Sbjct:    21 FCQFLKKHKVISSTGIIYVLVWRIFPQFNWYSRIVVGLVPLIISFQYALIGLGIINDQKT 80

Query:   145 VKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFG 204
             V+SMSR G  RELL GPL Y I I+L  +I+W  SP  I  I  LC GDGFA + G ++G
Sbjct:    81 VESMSRSGSPRELLLGPLSYGIIISLLTMIFWF-SPISIITIGVLCLGDGFAAIFGLKYG 139

Query:   205 KRKLPYNQNKSIAGSCAMASAGFLXXXXXXXXXXXXXXXQCSWELVFGFLVVSLASALVE 264
              +++PYN+ K++ GS A     F+                 S  L      V L S L+E
Sbjct:   140 TKRIPYNREKTLIGSLAFFICSFIGTFILLTLLQDRLLYP-SIVLAPSLFWVCLISTLIE 198

Query:   265 SLPISTKLDDNLTLTITSIAVGSLV 289
             SLP+     DN+T++I S+   +L+
Sbjct:   199 SLPLRDW--DNITISICSVLTLNLM 221


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.138   0.426    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      290       244   0.00098  113 3  11 22  0.37    33
                                                     32  0.45    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  594 (63 KB)
  Total size of DFA:  181 KB (2104 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.14u 0.18s 16.32t   Elapsed:  00:00:00
  Total cpu time:  16.14u 0.18s 16.32t   Elapsed:  00:00:00
  Start:  Sat May 11 03:03:20 2013   End:  Sat May 11 03:03:20 2013

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q67ZM7	PHYK2_ARATH	2, ., 7, ., -, ., -	0.5951	0.9724	0.9185	yes	no
Q2N2K0	PHYK3_SOYBN	2, ., 7, ., -, ., -	0.6775	0.8448	0.7680	yes	no
Q5N9J9	PHYK2_ORYSJ	2, ., 7, ., -, ., -	0.6448	0.8413	0.8026	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.1.n5	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	290
COG0170	216	COG0170, SEC59, Dolichol kinase [Lipid metabolism]	1e-14
pfam01148	259	pfam01148, CTP_transf_1, Cytidylyltransferase fami	7e-06

>gnl|CDD|223248 COG0170, SEC59, Dolichol kinase [Lipid metabolism]

 Score = 70.9 bits (174), Expect = 1e-14
 Identities = 52/215 (24%), Positives = 82/215 (38%), Gaps = 24/215 (11%)

Query: 85  LFDQKLNRKLVHISIGLIFML--CWPLFS-SGPRGAILASLTPGVNIIRMLLVGSGMWKD 141
               ++ RKL+HIS GL+F+L      F+       +L  L     + R+L+ G     +
Sbjct: 14  DTRLEVRRKLLHISGGLLFLLYILRDKFAIILFLLILLIILLLEFELFRLLIPG----LE 69

Query: 142 EATVKSMSRYG-------DRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDG 194
                 +S          ++     G + Y I   L            IA I  L  GDG
Sbjct: 70  GKVTLLLSELLSLIEREREKNGPGLGGIIYFIGGGLL-ASLLFPIEVAIAGILVLALGDG 128

Query: 195 FADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGFMYYFFSFGYMQCSWELVFGFL 254
            A ++G+R+G+ K      KS+ GS A   A FL  +    Y  +F         V    
Sbjct: 129 LASIIGKRYGRHKRILGNGKSLEGSLAFFIASFLVLLVLYGYLGAF---------VGAIG 179

Query: 255 VVSLASALVESLPISTKLDDNLTLTITSIAVGSLV 289
            + L      +      LDDNLT+ + +  +  L+
Sbjct: 180 ALVLEVGATATSLELLPLDDNLTIPLFAALLAYLL 214

Length = 216

>gnl|CDD|216329 pfam01148, CTP_transf_1, Cytidylyltransferase family

 Score = 46.2 bits (110), Expect = 7e-06
 Identities = 46/208 (22%), Positives = 65/208 (31%), Gaps = 23/208 (11%)

Query: 64  AVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLT 123
            + AA+    L       R     + L   L+   +GLIF L   L   G     L  L 
Sbjct: 27  LLVAAIIILALYELIRLLRLKFSSRLL---LLTRGLGLIFYLLGLLLVYGEGLLALFGLV 83

Query: 124 PGVNIIRMLLVGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSP-NG 182
             V  +  LLV             +  Y      L    Y  + ++L  +          
Sbjct: 84  LLVIPVLWLLV-----------LPVLAYHRVSSTLLPLFYVGLFLSLLLITNPFFGLLWA 132

Query: 183 IAAICNLCAGDGFADVVGRRFGKRKL--PYNQNKSIAGSCAMASAGFLSSIGFMYYFFSF 240
           +  I  + A D  A  VG+ FGK KL    + NK+  G      A  L  +         
Sbjct: 133 LLLILVVWASDIGAYFVGKAFGKHKLAPKISPNKTWEGFLGGFVAAVLVGL-LFSLLLGP 191

Query: 241 GYMQCSWELVFGFLVVSLASA---LVES 265
                    +   L+ SL      LVES
Sbjct: 192 YPSP--LHALLLGLLASLVGQFGDLVES 217

The members of this family are integral membrane protein cytidylyltransferases. The family includes phosphatidate cytidylyltransferase EC:2.7.7.41 as well as Sec59 from yeast. Sec59 is a dolichol kinase EC:2.7.1.108. Length = 259

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	290
KOG4453	269	consensus Predicted ER membrane protein [Function	100.0
COG0170	216	SEC59 Dolichol kinase [Lipid metabolism]	99.93
PF01148	259	CTP_transf_1: Cytidylyltransferase family; InterPr	99.86
KOG2468	510	consensus Dolichol kinase [Lipid transport and met	99.85
PRK11624	285	cdsA CDP-diglyceride synthase; Provisional	99.5
PLN02953	403	phosphatidate cytidylyltransferase	99.18
COG0575	265	CdsA CDP-diglyceride synthetase [Lipid metabolism]	99.13
PLN02594	342	phosphatidate cytidylyltransferase	98.89
COG4589	303	Predicted CDP-diglyceride synthetase/phosphatidate	98.21
PRK04032	159	hypothetical protein; Provisional	97.72
KOG1440	432	consensus CDP-diacylglycerol synthase [Lipid trans	97.52
TIGR00297	237	conserved hypothetical protein TIGR00297.	97.33
PF01940	226	DUF92: Integral membrane protein DUF92; InterPro:	97.28
COG1836	247	Predicted membrane protein [Function unknown]	97.17
PF01864	175	DUF46: Putative integral membrane protein DUF46; I	90.58

>KOG4453 consensus Predicted ER membrane protein [Function unknown]

Probab=100.00  E-value=4.1e-36  Score=264.12  Aligned_cols=206  Identities=36%  Similarity=0.672  Sum_probs=177.4

Q ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHHHhccccCccchHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHH
Q 022935           54 NPVLSDVCASAVSAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLL  133 (290)
Q Consensus        54 ~~~~~d~~~~~~~l~~~~~~l~l~~~l~~r~~~~~ei~RKliHi~~G~v~~l~~~~f~~~~~a~~laa~~~~l~~lr~~~  133 (290)
                      +...+|.+..+......+.++.+++...+|....+.+.||++|+..|.++.+.||+|+                  |+..
T Consensus        60 ns~kheiprkv~hssigf~~l~l~g~g~kr~~i~~~Li~kfi~ifigdlirlnWP~Fs------------------rLy~  121 (269)
T KOG4453|consen   60 NSLKHEIPRKVAHSSIGFALLLLFGSGTKRNVIQQSLIRKFIHIFIGDLIRLNWPIFS------------------RLYI  121 (269)
T ss_pred             hhhhhhhchhHhhhhHHHHHHHHHhcccchhhhhHHHHHHHHHHHHhHHHHhccHHHH------------------HHHH
Confidence            6678999999999999999999999999999999999999999999999999999985                  3333


Q ss_pred             hhcCCccchhhhhcccccccccccchhHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhHHHHhhhhcCCcccCCCCC
Q 022935          134 VGSGMWKDEATVKSMSRYGDRRELLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQN  213 (290)
Q Consensus       134 ~gl~~~~~~~~~~~~~R~~d~~~~l~G~ly~~l~~~l~~~lf~~~~p~~~~~il~l~~GD~~AaiVG~~~Gr~k~~~~~~  213 (290)
                      .+++...         |+.|++ .++|++||.+++...+.+||++.|++.+.++.+|  |++|++||||||+.|.|++++
T Consensus       122 r~lg~lm---------re~erh-l~nGvLfYvLgl~fs~~ff~kespi~s~~Llswc--Dt~AdtvGRKfG~~tpk~akn  189 (269)
T KOG4453|consen  122 RGLGILM---------REVERH-LLNGVLFYVLGLLFSAVFFWKESPIGSISLLSWC--DTIADTVGRKFGSTTPKYAKN  189 (269)
T ss_pred             hcccccc---------hHHHHH-HhcchHHHHHHHHHHhhccccccHHHHHHHHHHh--hhHHHHHhhhccccCCCcCCC
Confidence            3444332         233322 6799999999999999999998888776666666  999999999999999999999


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHhhcc--cccccH--HHHHHHHHHHHHHHHHhhcCCCCCCCcchhhHHHHHHHHHHh
Q 022935          214 KSIAGSCAMASAGFLSSIGFMYYFFSFG--YMQCSW--ELVFGFLVVSLASALVESLPISTKLDDNLTLTITSIAVGSLV  289 (290)
Q Consensus       214 KS~eGSla~fi~s~~~~~~~l~~f~~~g--~~~~~~--~~~~~~li~a~vatlvEalp~~~~~~DNltIPl~s~~~~~ll  289 (290)
                      ||++||++||.+++.+++.+++||.+.|  +.+..|  ......++++++++++|++|+.. .|||+|||+++++.++++
T Consensus       190 KSlAGSIgaft~Gvf~c~vy~gyf~s~g~~~l~~s~r~~~~~l~l~~g~vaAlvEsldi~~-lDDNltIpv~Sal~~yl~  268 (269)
T KOG4453|consen  190 KSLAGSIGAFTFGVFICIVYLGYFSSLGPDYLHMSWRETTLQLVLMVGMVAALVESLDITD-LDDNLTIPVASALAAYLS  268 (269)
T ss_pred             ccccchHHHHHHHHHHHHHHHHHHhccCcchhccccccchHHHHHHHHHHHHHHhcCCccC-CCCCeeehHHHHHHHHhc
Confidence            9999999999999999999999999887  655443  33445789999999999999975 999999999999999987


Q ss_pred             C
Q 022935          290 F  290 (290)
Q Consensus       290 ~  290 (290)
                      |
T Consensus       269 f  269 (269)
T KOG4453|consen  269 F  269 (269)
T ss_pred             C
Confidence            6

>COG0170 SEC59 Dolichol kinase [Lipid metabolism]

Probab=99.93  E-value=2.1e-24  Score=193.38  Aligned_cols=193  Identities=26%  Similarity=0.334  Sum_probs=122.1

Q ss_pred             ccCccchHHHHHHHHHHHHHHHHhhcCCchHHHHHH---HHHHH--HHHHHHHHhhcC---Cccchhhhhcccccccccc
Q 022935           85 LFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILA---SLTPG--VNIIRMLLVGSG---MWKDEATVKSMSRYGDRRE  156 (290)
Q Consensus        85 ~~~~ei~RKliHi~~G~v~~l~~~~f~~~~~a~~la---a~~~~--l~~lr~~~~gl~---~~~~~~~~~~~~R~~d~~~  156 (290)
                      ..+.|+.||..|+..+.+....  ....+..-..+.   .++..  .+..|....+..   .....+..+..+|+.|++.
T Consensus        14 ~~~~~~~rk~~hi~~~~l~~~~--~~~~~~~~~~~~~i~~~i~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~r~~e~~~   91 (216)
T COG0170          14 DTRLEVRRKLLHISGGLLFLLY--ILRDKFAIILFLLILLIILLLEFELFRLLIPGLEGKVTLLLSELLSLIEREREKNG   91 (216)
T ss_pred             chHHHHHHHHHHHHHHHHHHHH--HhhccHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHhhHHHhcC
Confidence            4567899999999777665432  322322211111   11111  223332211100   0012346777888887754


Q ss_pred             cchhHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHhhhHHHHhhhhcCCcccCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 022935          157 LLTGPLYYAITITLACVIYWRNSPNGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGFMYY  236 (290)
Q Consensus       157 ~l~G~ly~~l~~~l~~~lf~~~~p~~~~~il~l~~GD~~AaiVG~~~Gr~k~~~~~~KS~eGSla~fi~s~~~~~~~l~~  236 (290)
                      ...|..+|..+..+...+++. .+++.++++.+++||++|+++|+||||||.+.+++||+|||+++|+++++++..++.+
T Consensus        92 ~~~g~~~~~~~~~i~~~~lf~-~~~~~~~I~~l~~GD~lAsiiG~~~G~~~~~~~~~KSleGSla~fi~~~l~~~~~~~~  170 (216)
T COG0170          92 PGLGGIIYFIGGGLLASLLFP-IEVAIAGILVLALGDGLASIIGKRYGRHKRILGNGKSLEGSLAFFIASFLVLLVLYGY  170 (216)
T ss_pred             CCcCcHHHHHHHHHHHHHHcc-HHHHHHHHHHHHHhhHHHHHhCcccCccccccCCCCchhhhHHHHHHHHHHHHHHHHH
Confidence            334666666666666555432 3577799999999999999999999999888899999999999999999999877665


Q ss_pred             HhhcccccccHHHHHHHHHHHHHHHHHhhcCCCCCCCcchhhHHHHHHHHHHh
Q 022935          237 FFSFGYMQCSWELVFGFLVVSLASALVESLPISTKLDDNLTLTITSIAVGSLV  289 (290)
Q Consensus       237 f~~~g~~~~~~~~~~~~li~a~vatlvEalp~~~~~~DNltIPl~s~~~~~ll  289 (290)
                      ....     ...........+..++..|.    ...|||+|||+.+++..++.
T Consensus       171 ~~~~-----~~~i~~~~~~~~~~~~~~~~----~~~~DNltIPl~~~~~~~~~  214 (216)
T COG0170         171 LGAF-----VGAIGALVLEVGATATSLEL----LPLDDNLTIPLFAALLAYLL  214 (216)
T ss_pred             HHhH-----HHHHHHHHHHHHHHHhhccC----CCCCCceeHHHHHHHHHHHh
Confidence            3211     11110112222233344443    35899999999999988764

>PF01148 CTP_transf_1: Cytidylyltransferase family; InterPro: IPR000374 Phosphatidate cytidylyltransferase (2

Probab=99.86  E-value=2.8e-20  Score=168.12  Aligned_cols=209  Identities=23%  Similarity=0.318  Sum_probs=127.2

Q ss_pred             HHHHHHHHHHHHHHHHhccccCccchHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhcCCccchhhh
Q 022935           66 SAAVAASCLRLWEETARRDLFDQKLNRKLVHISIGLIFMLCWPLFSSGPRGAILASLTPGVNIIRMLLVGSGMWKDEATV  145 (290)
Q Consensus        66 ~l~~~~~~l~l~~~l~~r~~~~~ei~RKliHi~~G~v~~l~~~~f~~~~~a~~laa~~~~l~~lr~~~~gl~~~~~~~~~  145 (290)
                      .++.++..+...|+.+.+...+++..++..|+.....................+...........++..      .    
T Consensus        27 ~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~----   96 (259)
T PF01148_consen   27 LLVAVIIFLGFWELFRLFRIKSRSKFRLIIRILSWIFFLILFLFFYLRWLIPYFFATILIIALLLFLVL------G----   96 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHccccccchhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhhHHhhh------c----
Confidence            667777888888999888777778888888775555443333332222222222222222222222110      0    


Q ss_pred             hccccccc-ccccchhHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHhhhHHHHhhhhcCCcccC-CCCCcchHHHHHH
Q 022935          146 KSMSRYGD-RRELLTGPLYYAITITLACVIYWR-NSPNGIAAICNLCAGDGFADVVGRRFGKRKLP-YNQNKSIAGSCAM  222 (290)
Q Consensus       146 ~~~~R~~d-~~~~l~G~ly~~l~~~l~~~lf~~-~~p~~~~~il~l~~GD~~AaiVG~~~Gr~k~~-~~~~KS~eGSla~  222 (290)
                         +++.+ ......+..|.+..........+. +.+....+++++++||++|+++|++||||+.| .++|||||||++|
T Consensus        97 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~gD~~A~l~G~~fGk~~~~~~sp~KT~EGsi~~  173 (259)
T PF01148_consen   97 ---ERRIRRIISTLFGLIYFGIFLLLLLIFFWFFGPPLALIGILILGIGDSFAYLVGRRFGKHLAPKISPKKTWEGSIAG  173 (259)
T ss_pred             ---chHHHHHHHHHHHHHHHhHHHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCCCCCHHHHhHH
Confidence               11111 111123344433333222222233 33456689999999999999999999999655 7999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhcccccccHHHHHHHHHH---HHHHHHHhh--------------cCCCCCCCcchhhHHHHHHH
Q 022935          223 ASAGFLSSIGFMYYFFSFGYMQCSWELVFGFLVV---SLASALVES--------------LPISTKLDDNLTLTITSIAV  285 (290)
Q Consensus       223 fi~s~~~~~~~l~~f~~~g~~~~~~~~~~~~li~---a~vatlvEa--------------lp~~~~~~DNltIPl~s~~~  285 (290)
                      ++++++++.++..+..+..  .+.+..+..+++.   +.++++.|+              +|-....+||+..|+.++.+
T Consensus       174 ~i~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~gdl~~S~~KR~~~iKD~g~lipghGg~lDr~d~~l~~~~~  251 (259)
T PF01148_consen  174 FISSFIISFLLLYYLSSFF--LSWWQAILISLLASIVEAFGDLFESAIKRDAGIKDSGNLIPGHGGILDRFDSLLFAAPV  251 (259)
T ss_pred             HHHHHHHHHHHHHHhcchh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccCcCCcccchHhHHHHHHH
Confidence            9999999988766543210  1223333334444   444567777              45444579999999999988


Q ss_pred             HHHh
Q 022935          286 GSLV  289 (290)
Q Consensus       286 ~~ll  289 (290)
                      .|++
T Consensus       252 ~~~~  255 (259)
T PF01148_consen  252 FYIL  255 (259)
T ss_pred             HHHH
Confidence            8765

7.7.41 from EC) [, , ] (also known as CDP- diacylglycerol synthase) (CDS) is the enzyme that catalyzes the synthesis of CDP-diacylglycerol from CTP and phosphatidate (PA): CTP + phosphatidate = diphosphate + CDP-diacylglycerol CDP-diacylglycerol is an important branch point intermediate in both prokaryotic and eukaryotic organisms. CDS is a membrane-bound enzyme.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016020 membrane

>KOG2468 consensus Dolichol kinase [Lipid transport and metabolism]

Probab=99.85  E-value=1.2e-20  Score=180.59  Aligned_cols=188  Identities=22%  Similarity=0.340  Sum_probs=129.0

Q ss_pred             CccchHHHHHHHHHHHHHHHHhhcCCchHHHHH---HHHHHHHHHHHHHHh-hcCCccchhhhhcccccccccccchhHH
Q 022935           87 DQKLNRKLVHISIGLIFMLCWPLFSSGPRGAIL---ASLTPGVNIIRMLLV-GSGMWKDEATVKSMSRYGDRRELLTGPL  162 (290)
Q Consensus        87 ~~ei~RKliHi~~G~v~~l~~~~f~~~~~a~~l---aa~~~~l~~lr~~~~-gl~~~~~~~~~~~~~R~~d~~~~l~G~l  162 (290)
                      ++...||..|...-..++- -..++++..-+.+   .+++..+|++|+..+ .++. .-+...+....++|.+++...++
T Consensus       310 ~~t~~RK~~HlliV~l~iP-~li~d~~fL~lA~s~~LavFl~lE~IR~~ri~PlG~-~l~~fl~~F~DeRDsGpLIiSh~  387 (510)
T KOG2468|consen  310 NETTSRKYFHLLIVLLYIP-GLIFDPNFLYLAFSGALAVFLFLEYIRFLRIPPLGS-ALHLFLSRFTDERDSGPLIISHF  387 (510)
T ss_pred             hHHHHHHHHHHHHHHHHhh-HHhcCchhHHHHHhhHHHHHHHHHHHHHhcCCCchH-HHHHHHHHhcccccCCceeHHHH
Confidence            3348999999865444322 2235555433322   346778999998532 1110 01334455555566666777889


Q ss_pred             HHHHHHHHHHHHHhc--C--ch-HHHHHHHHHHHhhhHHHHhhhhcCCcccCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q 022935          163 YYAITITLACVIYWR--N--SP-NGIAAICNLCAGDGFADVVGRRFGKRKLPYNQNKSIAGSCAMASAGFLSSIGFMYYF  237 (290)
Q Consensus       163 y~~l~~~l~~~lf~~--~--~p-~~~~~il~l~~GD~~AaiVG~~~Gr~k~~~~~~KS~eGSla~fi~s~~~~~~~l~~f  237 (290)
                      |..+|..+..++.+.  +  .. .-.+|++.+++||++|+++|+||||+||+ +.+||+|||+|+.+..++++.+..  +
T Consensus       388 yLLiGcslPIWms~~p~~~~ral~~laGiLalGiGDTmASiiG~r~G~~RW~-~TkKTlEGT~Afivs~~iv~~ll~--i  464 (510)
T KOG2468|consen  388 YLLIGCSLPIWMSNSPCGGDRALALLAGILALGIGDTMASIIGKRYGRIRWS-GTKKTLEGTLAFIVSSFIVCLLLL--I  464 (510)
T ss_pred             HHHHhcccchhccCCCCCchhhhhhhhhheeeccchHHHHHHhhhhcceecC-CCcceeehhhHHHHHHHHHHHHHH--H
Confidence            999999998888642  1  11 23368999999999999999999999998 459999999999999999998765  2


Q ss_pred             hhccccc-ccHHHHHHHHHHHHHHHHHhhcCCCCCCCcchhhHHHHHHH
Q 022935          238 FSFGYMQ-CSWELVFGFLVVSLASALVESLPISTKLDDNLTLTITSIAV  285 (290)
Q Consensus       238 ~~~g~~~-~~~~~~~~~li~a~vatlvEalp~~~~~~DNltIPl~s~~~  285 (290)
                      .+.|+.. ..|..   .+..+..++++|+.   +.++||+.+|+....+
T Consensus       465 ~~~~v~~~~t~~~---~L~a~~~salLEa~---T~q~DNlllPl~~~il  507 (510)
T KOG2468|consen  465 FKAGVFLSLTWWQ---TLFACLLSALLEAY---TTQNDNLLLPLYMYIL  507 (510)
T ss_pred             hhcccccchHHHH---HHHHHHHHHHHHHh---hhccccchHHHHHHHH
Confidence            3344332 22322   35566677899995   5699999999986654

>PRK11624 cdsA CDP-diglyceride synthase; Provisional

Probab=99.50  E-value=1.6e-12  Score=121.11  Aligned_cols=106  Identities=20%  Similarity=0.169  Sum_probs=68.5

Q ss_pred             chhHHHHHHHHHHHHHHHh----cC---chHHH-HHHHHHHHhhhHHHHhhhhcCCccc-C-CCCCcchHHHHHHHHHHH
Q 022935          158 LTGPLYYAITITLACVIYW----RN---SPNGI-AAICNLCAGDGFADVVGRRFGKRKL-P-YNQNKSIAGSCAMASAGF  227 (290)
Q Consensus       158 l~G~ly~~l~~~l~~~lf~----~~---~p~~~-~~il~l~~GD~~AaiVG~~~Gr~k~-~-~~~~KS~eGSla~fi~s~  227 (290)
                      ..|.+|+...+.....+-.    .+   .+..+ ..+++...+|+.|+++||++||||+ | +||||||||++++++.+.
T Consensus       122 ~~g~~~~~~~~~~~~~l~~~~~~~~~~~G~~~vl~l~~~vw~sDt~AYf~Gr~fGk~KL~P~ISPkKTwEG~iGg~~~~~  201 (285)
T PRK11624        122 IFGVLTIVPFFWGMLALRAWHYDENHYSGAWWLLYVMILVWGADSGAYMFGKLFGKHKLAPKVSPGKTWEGFIGGLATAA  201 (285)
T ss_pred             HHHHHHHHHHHHHHHHHHcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCCCCCchhhhHHHHHHHH
Confidence            4577776555443332321    11   12233 3444455899999999999999996 6 899999999999999999


Q ss_pred             HHHHHHHHHHhhcccccccHHHHHHHH---HHHHHHHHHhhc
Q 022935          228 LSSIGFMYYFFSFGYMQCSWELVFGFL---VVSLASALVESL  266 (290)
Q Consensus       228 ~~~~~~l~~f~~~g~~~~~~~~~~~~l---i~a~vatlvEal  266 (290)
                      +++.++..+. +..  .+.+..+..++   +.+..++++||.
T Consensus       202 ~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~GDL~ES~  240 (285)
T PRK11624        202 VISWLFGMWA-PLD--VAPVTLLICSIVAALASVLGDLTESM  240 (285)
T ss_pred             HHHHHHHHHH-ccc--ccHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            9887764332 111  12233333333   345567999997

>PLN02953 phosphatidate cytidylyltransferase

Probab=99.18  E-value=1.2e-09  Score=104.74  Aligned_cols=75  Identities=21%  Similarity=0.194  Sum_probs=53.9

Q ss_pred             HHHhhhHHHHhhhhcCCcccC-CCCCcchHHHHHHHHHHHHHHHHHHHHHhhcccccccHHHHHHH---HHHHHHHHHHh
Q 022935          189 LCAGDGFADVVGRRFGKRKLP-YNQNKSIAGSCAMASAGFLSSIGFMYYFFSFGYMQCSWELVFGF---LVVSLASALVE  264 (290)
Q Consensus       189 l~~GD~~AaiVG~~~Gr~k~~-~~~~KS~eGSla~fi~s~~~~~~~l~~f~~~g~~~~~~~~~~~~---li~a~vatlvE  264 (290)
                      ...+|.+|+++|+++||||+. +|+||||||.+++++.+++++.+...++. .  ....++.+..+   .+.+.+++++|
T Consensus       278 vw~~Di~AY~~G~~fGk~kl~~ISPkKTwEG~iGGil~~vlv~~l~~~~l~-~--~~~~~~~i~lg~li~~~~~~GDL~e  354 (403)
T PLN02953        278 VIATDTFAFLGGKAFGRTPLTSISPKKTWEGTFVGLVGCIAITILLSKSLS-W--PQSLFSSIAFGFLNFFGSVFGDLTE  354 (403)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCcCCCCCeeeeehhHHHHHHHHHHHHHHHHc-c--chHHHHHHHHHHHHHHHHHhhHHHH
Confidence            346899999999999999975 89999999999999999888876543321 1  01112222222   34466789999


Q ss_pred             hc
Q 022935          265 SL  266 (290)
Q Consensus       265 al  266 (290)
                      +.
T Consensus       355 S~  356 (403)
T PLN02953        355 SM  356 (403)
T ss_pred             HH
Confidence            97

>COG0575 CdsA CDP-diglyceride synthetase [Lipid metabolism]

Probab=99.13  E-value=8.7e-09  Score=95.14  Aligned_cols=106  Identities=26%  Similarity=0.312  Sum_probs=68.9

Q ss_pred             hhHHHHHHHHHHHHHHHhc----CchHHHHHHHHHHHhhhHHHHhhhhcCCccc-C-CCCCcchHHHHHHHHHHHHHHHH
Q 022935          159 TGPLYYAITITLACVIYWR----NSPNGIAAICNLCAGDGFADVVGRRFGKRKL-P-YNQNKSIAGSCAMASAGFLSSIG  232 (290)
Q Consensus       159 ~G~ly~~l~~~l~~~lf~~----~~p~~~~~il~l~~GD~~AaiVG~~~Gr~k~-~-~~~~KS~eGSla~fi~s~~~~~~  232 (290)
                      .+..|++..+......+..    .........+....+|..|+.+||++||||+ | .||+|||||.+++.+.+.+++..
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~l~~~vw~~Di~Ayf~Gr~fGk~kl~p~iSP~KT~eGfigG~~~~~~v~~~  188 (265)
T COG0575         109 FGLLYVGVGLLALLPFRLGVLYSGLILLLLLFLGVWAGDIGAYFVGRRFGKHKLAPKISPKKTWEGFIGGALGAVLVAVL  188 (265)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhhHHHHHHHcCCCCCCCcCCCCCchHHhHHHHHHHHHHHHH
Confidence            5677777665544433321    1112334455556999999999999999984 6 89999999999999999888877


Q ss_pred             HHHHHhhcccccccHHHHHH---HHHHHHHHHHHhhc
Q 022935          233 FMYYFFSFGYMQCSWELVFG---FLVVSLASALVESL  266 (290)
Q Consensus       233 ~l~~f~~~g~~~~~~~~~~~---~li~a~vatlvEal  266 (290)
                      .....+.  ...+.+..+..   ..+.+.+++++||.
T Consensus       189 ~~~~~~~--~~~~~~~~~~l~~~~~l~~~lGDL~eS~  223 (265)
T COG0575         189 VIFLLSS--LILNIWTLLILGLLLVLTSQLGDLFESY  223 (265)
T ss_pred             HHHHHhh--hhHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence            5544321  01112322222   34455667899964

>PLN02594 phosphatidate cytidylyltransferase

Probab=98.89  E-value=2.1e-08  Score=95.13  Aligned_cols=53  Identities=17%  Similarity=0.160  Sum_probs=46.3

Q ss_pred             HHHHHHHHhhhHHHHhhhhcCCcccC-CCCCcchHHHHHHHHHHHHHHHHHHHH
Q 022935          184 AAICNLCAGDGFADVVGRRFGKRKLP-YNQNKSIAGSCAMASAGFLSSIGFMYY  236 (290)
Q Consensus       184 ~~il~l~~GD~~AaiVG~~~Gr~k~~-~~~~KS~eGSla~fi~s~~~~~~~l~~  236 (290)
                      ..+.....+|.+|+++|+++||||+. .||||||||.+++++++.+.+.++..+
T Consensus       129 l~~~lV~~nDi~AY~~G~~fGk~kL~~iSPkKTwEGfiGg~i~T~i~~~~~~~~  182 (342)
T PLN02594        129 LPASLIVINDIAAYLFGFFFGRTPLIKLSPKKTWEGFIGASVTTLISAFYLANI  182 (342)
T ss_pred             HHHHHHHHHhHHHHHHHHHhcCCCCCccCCCCchhhhHHHHHHHHHHHHHHHHH
Confidence            45556668999999999999999974 899999999999999999999877544

>COG4589 Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only]

Probab=98.21  E-value=0.00024  Score=64.82  Aligned_cols=68  Identities=24%  Similarity=0.322  Sum_probs=50.9

Q ss_pred             HHHHH-HhhhHHHHhhhhcCCccc-C-CCCCcchHHHHHHHHHHHHHHHHHHHHHhhcccccccHHHHHHHHHHHH
Q 022935          186 ICNLC-AGDGFADVVGRRFGKRKL-P-YNQNKSIAGSCAMASAGFLSSIGFMYYFFSFGYMQCSWELVFGFLVVSL  258 (290)
Q Consensus       186 il~l~-~GD~~AaiVG~~~Gr~k~-~-~~~~KS~eGSla~fi~s~~~~~~~l~~f~~~g~~~~~~~~~~~~li~a~  258 (290)
                      .++++ ..|-+-++-|+.+||||. | .||+||+||-+++.+.+.+.+.... ++.++    ++++....++++++
T Consensus       179 lli~~q~nDV~QYvwGk~fGk~Ki~P~vSPnKTveGl~GGilt~~~~~~~l~-~lTp~----~~lqa~~~~~~I~l  249 (303)
T COG4589         179 LLILTELNDVAQYVWGKSFGKRKIVPKVSPNKTVEGLIGGILTTMIASAILG-LLTPL----NTLQALLAGLLIGL  249 (303)
T ss_pred             HHHHHHHHHHHHHHHhhhcCCcccCCCcCCcchHHHHhhhHHHHHHHHHHHH-HhCCC----cHHHHHHHHHHHHH
Confidence            33444 999999999999999996 5 8999999999999999998888765 54443    23444444444443

>PRK04032 hypothetical protein; Provisional

Probab=97.72  E-value=9.7e-05  Score=63.33  Aligned_cols=64  Identities=14%  Similarity=0.155  Sum_probs=40.2

Q ss_pred             hhhc-CCcccCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcccccccHHHHHHHH---HHHHHHHHHhhc
Q 022935          200 GRRF-GKRKLPYNQNKSIAGSCAMASAGFLSSIGFMYYFFSFGYMQCSWELVFGFL---VVSLASALVESL  266 (290)
Q Consensus       200 G~~~-Gr~k~~~~~~KS~eGSla~fi~s~~~~~~~l~~f~~~g~~~~~~~~~~~~l---i~a~vatlvEal  266 (290)
                      |+++ +.+|+ .|++|||||.+++.+.+.+.+.++...+...  ....++....++   +.+..++++||.
T Consensus        23 g~~~~dg~~i-iSP~KTwEG~iGGv~~~~l~~~~~~~~~~~~--~~~~~~~~~~g~li~v~~~~GDL~eS~   90 (159)
T PRK04032         23 GKTFVDGRRI-LGDGKTWRGLIGGILFGTLVGLIQNLLVPAY--IGALGVAIILAFLLSFGALLGDMLGSF   90 (159)
T ss_pred             CCcCCCCCee-CCCCCcHHHhHHHHHHHHHHHHHHHHHHccc--hhHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence            5666 33444 6899999999999999999988764432210  001122323333   344557899997

>KOG1440 consensus CDP-diacylglycerol synthase [Lipid transport and metabolism]

Probab=97.52  E-value=0.0013  Score=63.93  Aligned_cols=53  Identities=25%  Similarity=0.236  Sum_probs=42.8

Q ss_pred             HHHHHHHHhhhHHHHhhhhcCCccc-CCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 022935          184 AAICNLCAGDGFADVVGRRFGKRKL-PYNQNKSIAGSCAMASAGFLSSIGFMYY  236 (290)
Q Consensus       184 ~~il~l~~GD~~AaiVG~~~Gr~k~-~~~~~KS~eGSla~fi~s~~~~~~~l~~  236 (290)
                      ........+|-+|+++|.++||+++ ..++||||||-+|+.++.++.+.++.+.
T Consensus       224 ~P~~lvicnDi~AY~~Gf~fGktPLiklSPKKTwEGFiGg~~~tvv~~i~~s~v  277 (432)
T KOG1440|consen  224 VPAGLVICNDIFAYLFGFFFGKTPLIKLSPKKTWEGFIGGTFGTVVFGILFSYV  277 (432)
T ss_pred             HHhHhheeCchHHHHHhhhhcCCcccccCCCCccchhhchhHHHHHHHHHHHHH
Confidence            3444555899999999999999985 5899999999999977777777665444

>TIGR00297 conserved hypothetical protein TIGR00297

Probab=97.33  E-value=0.028  Score=51.30  Aligned_cols=78  Identities=18%  Similarity=0.242  Sum_probs=55.1

Q ss_pred             HHHHHHHHHhhhHHHHhhhhcCCcc--------cC--CCCCcchHHHHHHHHHHHHHHHHHHHHHhhcccccccHHHHHH
Q 022935          183 IAAICNLCAGDGFADVVGRRFGKRK--------LP--YNQNKSIAGSCAMASAGFLSSIGFMYYFFSFGYMQCSWELVFG  252 (290)
Q Consensus       183 ~~~il~l~~GD~~AaiVG~~~Gr~k--------~~--~~~~KS~eGSla~fi~s~~~~~~~l~~f~~~g~~~~~~~~~~~  252 (290)
                      .++-+.-+.+|+.|+-+|..++|+.        .|  -|+.=|++|+++.++.+++++...+..    +..  ++..+..
T Consensus       115 f~~s~A~a~aDT~ASEiG~ls~~~p~lItt~k~V~~GT~GgVS~~Gt~As~~Ga~~I~~~~~~~----~~~--~~~~~~~  188 (237)
T TIGR00297       115 YVASVATALSDTMASEIGKAYGKNPRLITTLQRVEPGTDGAISVEGTLAGFAGALAIALLGYLL----GLI--SFKGILF  188 (237)
T ss_pred             HHHHHHHHHcchHHHhhhhccCCCCeEeecCccCCCCCCCcccHHHHHHHHHHHHHHHHHHHHH----hhc--chHHHHH
Confidence            4566667799999999999998743        12  367789999999999999998654322    111  1223344


Q ss_pred             HHHHHHHHHHHhhc
Q 022935          253 FLVVSLASALVESL  266 (290)
Q Consensus       253 ~li~a~vatlvEal  266 (290)
                      +.+.+.+++++|++
T Consensus       189 ~~~aG~~Gsl~DSl  202 (237)
T TIGR00297       189 STLAAFAGTNLDSL  202 (237)
T ss_pred             HHHHHHHHHHHHHH
Confidence            56677788888875

>PF01940 DUF92: Integral membrane protein DUF92; InterPro: IPR002794 Many members of this family have no known function and are predicted to be integral membrane proteins

Probab=97.28  E-value=0.045  Score=49.69  Aligned_cols=101  Identities=18%  Similarity=0.186  Sum_probs=68.1

Q ss_pred             HHHHHHHHHHhhhHHHHhhhhcCCccc--------C--CCCCcchHHHHHHHHHHHHHHHHHHHHHhhcccccccHHHHH
Q 022935          182 GIAAICNLCAGDGFADVVGRRFGKRKL--------P--YNQNKSIAGSCAMASAGFLSSIGFMYYFFSFGYMQCSWELVF  251 (290)
Q Consensus       182 ~~~~il~l~~GD~~AaiVG~~~Gr~k~--------~--~~~~KS~eGSla~fi~s~~~~~~~l~~f~~~g~~~~~~~~~~  251 (290)
                      +..+-+.-+-+|+.|+-+|..+++++.        |  -|+.=|++|+++.+..+++++.......      +.+...+.
T Consensus       109 ~~~~s~A~a~aDTwASEiG~ls~~~P~lItt~k~V~~Gt~GgVS~lGt~as~~Ga~~Ia~~~~~~~------~~~~~~~~  182 (226)
T PF01940_consen  109 AFLGSIAAANADTWASEIGVLSKGPPRLITTFKRVPPGTSGGVSLLGTLASLAGALLIALVAFLLG------LISFPLVL  182 (226)
T ss_pred             HHHHHHHHHhhhHHHHhhhhhcCCCCeEeeCCcCCCCCCCCeechHHHHHHHHHHHHHHHHHHHHH------ccchHHHH
Confidence            345666677999999999998877532        1  2667899999999999999998765442      11122233


Q ss_pred             HHHHHHHHHHHHhhc-----CCCCCCCcchhhHHHHHHHHHH
Q 022935          252 GFLVVSLASALVESL-----PISTKLDDNLTLTITSIAVGSL  288 (290)
Q Consensus       252 ~~li~a~vatlvEal-----p~~~~~~DNltIPl~s~~~~~l  288 (290)
                      ...+.+.+++++|++     ....+..||=.|=+.+.+++.+
T Consensus       183 ~~~~~G~~Gsl~DSlLGAtlQ~G~~~l~N~~VN~lstl~~al  224 (226)
T PF01940_consen  183 LIALAGFLGSLLDSLLGATLQRGRGWLNNDAVNFLSTLIGAL  224 (226)
T ss_pred             HHHHHHHHHHHHHHHhhHHHhCCCCCcChhHHHHHHHHHHHH
Confidence            345666777777665     1012467787777777766544

; GO: 0016021 integral to membrane

>COG1836 Predicted membrane protein [Function unknown]

Probab=97.17  E-value=0.036  Score=50.48  Aligned_cols=77  Identities=25%  Similarity=0.353  Sum_probs=51.4

Q ss_pred             HHHHHHHHhhhHHHHhhhhcCCccc---------C-CCCCcchHHHHHHHHHHHHHHHHHHHHHhhcccccccHHHHHHH
Q 022935          184 AAICNLCAGDGFADVVGRRFGKRKL---------P-YNQNKSIAGSCAMASAGFLSSIGFMYYFFSFGYMQCSWELVFGF  253 (290)
Q Consensus       184 ~~il~l~~GD~~AaiVG~~~Gr~k~---------~-~~~~KS~eGSla~fi~s~~~~~~~l~~f~~~g~~~~~~~~~~~~  253 (290)
                      ++-...+-+|++|+-+|+.+||+..         | -++.-|++|++|.++.+++++..-....    +.  +...+...
T Consensus       125 ~~SvAta~aDT~ASEiG~~~~~~p~lITtfkrV~~Gt~GaVS~~GelAav~Ga~iIal~~~l~~----~~--~~~~v~~v  198 (247)
T COG1836         125 AASVATANADTLASEIGKAYGKRPRLITTFKRVEPGTSGAVSLVGELAAVAGAFIIALLSYLVG----YI--SLGGVLSV  198 (247)
T ss_pred             HHHHHHHhhhHHHHHHhHhhCCCeEEEEeeeEcCCCCCCccchhhhHHHHHHHHHHHHHHHHHH----hc--ccchhHHH
Confidence            3444566999999999999998642         1 3677899999999999999987654332    11  12222234


Q ss_pred             HHHHHHHHHHhhc
Q 022935          254 LVVSLASALVESL  266 (290)
Q Consensus       254 li~a~vatlvEal  266 (290)
                      .+.+.+++.+|++
T Consensus       199 tlaGf~G~~iDSl  211 (247)
T COG1836         199 TLAGFAGTNIDSL  211 (247)
T ss_pred             HHHHHHhhhHHHH
Confidence            4455555555554

>PF01864 DUF46: Putative integral membrane protein DUF46; InterPro: IPR002726 This archaebacterial protein has no known function

Probab=90.58  E-value=0.58  Score=40.88  Aligned_cols=24  Identities=25%  Similarity=0.124  Sum_probs=21.2

Q ss_pred             CCCCcchHHHHHHHHHHHHHHHHH
Q 022935          210 YNQNKSIAGSCAMASAGFLSSIGF  233 (290)
Q Consensus       210 ~~~~KS~eGSla~fi~s~~~~~~~  233 (290)
                      .+++|||+|.+++.+.+.+++.+.
T Consensus        44 lGdgKTwrG~i~gvl~g~l~g~i~   67 (175)
T PF01864_consen   44 LGDGKTWRGFIGGVLAGTLVGIIQ   67 (175)
T ss_pred             cCCCCeEEeeeHHHHHHHHHHHHH
Confidence            478999999999999999988764

It contains several predicted transmembrane regions, suggesting it is an integral membrane protein.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	290
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 3e-04
 Identities = 40/280 (14%), Positives = 81/280 (28%), Gaps = 77/280 (27%)

Query: 18  RIRVRSPSPKFPPRFSQFSISRPNLTSPSAAMLLPQNPVLSDVCASAVSAAVAASCLRLW 77
            I++R  S +      +   S+P         LL    VL +V  +    A   SC ++ 
Sbjct: 222 NIKLRIHSIQ--AELRRLLKSKPYENC-----LL----VLLNVQNAKAWNAFNLSC-KIL 269

Query: 78  EETARRDLFDQKLNRKLVHISI-----GL-------IFMLC-WPLFSSGPRGAILASLTP 124
             T  + + D        HIS+      L       + +          PR  +  +  P
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN--P 327

Query: 125 -GVNII-RMLLVGSGMWKD-------------EATVKSMSRYGDRRELLTGPLYYAITI- 168
             ++II   +  G   W +             E+++  +     R+      ++  +++ 
Sbjct: 328 RRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRK------MFDRLSVF 381

Query: 169 ---------TLACVIYWRNSP-NGIAAICNLCAGDGFA--DVVGRRFG--------KRKL 208
                     L   + W +   + +  + N                          K KL
Sbjct: 382 PPSAHIPTILL--SLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKL 439

Query: 209 P--YNQNKSIAGS----CAMASAGFLSSIGFMYYFFSFGY 242
              Y  ++SI           S   +      Y++   G+
Sbjct: 440 ENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH 479

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00