Citrus Sinensis ID: 022969
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 289 | ||||||
| 296089209 | 433 | unnamed protein product [Vitis vinifera] | 1.0 | 0.667 | 0.596 | 1e-106 | |
| 118489441 | 332 | unknown [Populus trichocarpa x Populus d | 1.0 | 0.870 | 0.584 | 1e-106 | |
| 359489458 | 332 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 0.870 | 0.596 | 1e-105 | |
| 356496330 | 343 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 0.842 | 0.548 | 2e-90 | |
| 255541184 | 342 | conserved hypothetical protein [Ricinus | 0.986 | 0.833 | 0.558 | 7e-89 | |
| 449469343 | 344 | PREDICTED: uncharacterized protein LOC10 | 0.837 | 0.703 | 0.527 | 5e-84 | |
| 357469915 | 344 | hypothetical protein MTR_4g027070 [Medic | 0.858 | 0.720 | 0.551 | 3e-82 | |
| 42572745 | 404 | uncharacterized protein [Arabidopsis tha | 0.813 | 0.581 | 0.489 | 5e-73 | |
| 42570499 | 329 | uncharacterized protein [Arabidopsis tha | 0.809 | 0.711 | 0.491 | 2e-72 | |
| 224136207 | 157 | predicted protein [Populus trichocarpa] | 0.539 | 0.993 | 0.794 | 7e-70 |
| >gi|296089209|emb|CBI38912.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/332 (59%), Positives = 231/332 (69%), Gaps = 43/332 (12%)
Query: 1 MASLAQAPSAMSTVGVLWTLPRSMRLVNFKSVIPVVTSPCTHVKHSPLCCTKLTPWEPSP 60
MASLAQAPS M++V V R M+L + T P +KH P+CCTKLTPWEPSP
Sbjct: 93 MASLAQAPSTMASVTVPNVHHRGMKLFQPSISLHGFTFPHIRIKHPPVCCTKLTPWEPSP 152
Query: 61 ASHAPTDDADYKILNKNSNIFETLSSDNTAEAPATKTEEVTDANNQPLVQLQFLKWPMWL 120
+++PTD+ L SNIFETL+SD+TAEAP T TEE+ +NQ QLQFLKWPMWL
Sbjct: 153 VTYSPTDEKGSDFLRGTSNIFETLNSDDTAEAPVTNTEELIHTSNQSSGQLQFLKWPMWL 212
Query: 121 LGPCILLGT-------------------------------------------DSCARSKN 137
LGP +LL T D+CAR KN
Sbjct: 213 LGPSLLLATGMVPTLWLPISSIFLGPNIASLLSLIGLDCIFNLGATLFLLMADACARPKN 272
Query: 138 TTRACNSKPPFSYKFWNMVANTTGFIIPLLMLFGSQKGFLQPQLPFIPFAVLLGPYLLLL 197
+ NSK PFSY+FWN+VA TGF++PL++ FGSQ GF QPQLPFIPFAVL+GPYLLLL
Sbjct: 273 LAQPLNSKAPFSYQFWNVVATITGFVVPLIVFFGSQNGFFQPQLPFIPFAVLMGPYLLLL 332
Query: 198 SIQILTEMLTWHWQSPVWLVTPVVYESYRVLQLMRGLKLGAELSAPAWIVHTVRGLVCWW 257
S+QILTEMLTWHWQSPVWLVTPVVYE+YRVLQLMRGLKLGAELSAPAW++HTVRGLVCWW
Sbjct: 333 SVQILTEMLTWHWQSPVWLVTPVVYEAYRVLQLMRGLKLGAELSAPAWMMHTVRGLVCWW 392
Query: 258 ILILGVQLMRVAWFAGFTSQARRQQSPASADG 289
+LILG+Q+MRVAWFAGFT+ A Q+S ADG
Sbjct: 393 VLILGMQVMRVAWFAGFTAGAWPQKSSTLADG 424
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118489441|gb|ABK96523.1| unknown [Populus trichocarpa x Populus deltoides] | Back alignment and taxonomy information |
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| >gi|359489458|ref|XP_003633924.1| PREDICTED: uncharacterized protein LOC100854105 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356496330|ref|XP_003517021.1| PREDICTED: uncharacterized protein LOC100779126 [Glycine max] | Back alignment and taxonomy information |
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| >gi|255541184|ref|XP_002511656.1| conserved hypothetical protein [Ricinus communis] gi|223548836|gb|EEF50325.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|449469343|ref|XP_004152380.1| PREDICTED: uncharacterized protein LOC101219687 [Cucumis sativus] gi|449528182|ref|XP_004171085.1| PREDICTED: uncharacterized LOC101219687 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|357469915|ref|XP_003605242.1| hypothetical protein MTR_4g027070 [Medicago truncatula] gi|355506297|gb|AES87439.1| hypothetical protein MTR_4g027070 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|42572745|ref|NP_974468.1| uncharacterized protein [Arabidopsis thaliana] gi|332646561|gb|AEE80082.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|42570499|ref|NP_850729.2| uncharacterized protein [Arabidopsis thaliana] gi|7288007|emb|CAB81845.1| putative protein [Arabidopsis thaliana] gi|332646563|gb|AEE80084.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|224136207|ref|XP_002326805.1| predicted protein [Populus trichocarpa] gi|222835120|gb|EEE73555.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 289 | ||||||
| TAIR|locus:2103326 | 404 | AT3G60590 [Arabidopsis thalian | 0.574 | 0.410 | 0.652 | 2.2e-76 |
| TAIR|locus:2103326 AT3G60590 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 615 (221.5 bits), Expect = 2.2e-76, Sum P(2) = 2.2e-76
Identities = 111/170 (65%), Positives = 137/170 (80%)
Query: 121 LGPCI-LLGTDSCARSKNTTRACNSKPPFSYKFWNMVANTTGFIIPLLMLFGSQKGFL-- 177
LG + LL DSCAR K+ +++CNSKPPFSYKFWNM + GF++P+L+LFGSQ G L
Sbjct: 231 LGATLFLLMADSCARPKDPSQSCNSKPPFSYKFWNMFSLIIGFLVPMLLLFGSQSGLLAS 290
Query: 178 -QPQLPFIPFAVLLGPYLLLLSIQILTEMLTWHWQSPVWLVTPVVYESYRVLQLMRGLKL 236
QPQ+PF+ AV+L PY +LL++Q LTE+LTWHWQSPVWLVTPVVYE+YR+LQLMRGL L
Sbjct: 291 LQPQIPFLSSAVILFPYFILLAVQTLTEILTWHWQSPVWLVTPVVYEAYRILQLMRGLTL 350
Query: 237 GAELSAPAWIVHTVRGLVCWWILILGVQLMRVAWFAGFTSQARRQQSPAS 286
AE++AP W+VH +RGLV WW+LILG+QLMRVAWFAGF S+ Q P S
Sbjct: 351 SAEVNAPVWVVHMLRGLVSWWVLILGMQLMRVAWFAGFASRTTTGQQPQS 400
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00