Citrus Sinensis ID: 023235

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-----
Protein Sequence
MTKKAAPKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMCDYIRQRVSLLLKFSKQRLNAYSDLYFSPFKAIEKLF
Secondary Structure (PSIPRED)
cccccccccccEEEEEEcEEEEEEEHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEEccccccHHHHHHHHcccccccEEEEEEccccccccccccccccccccEEccccccccccccHHHHHHHHHHHHHccccccEEEEEcccccccccHHHHHHHHHccccccEEEcccccccccccccccccccccccccccEEEEEHHHHHHHccccccHHHHHHHHccccccccccccccccccccHHHHHHHHcccccccccccEEEEccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEEcccccccHHHHHHHHHccccccEEEEEEccccccccccccccccEcccccccccEEEEccccHHHHHHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHcccccHHHcccccccccccccccccccHHHHccccEEEEEEHHHHHHHHHcHHHHHHHHHHccccccccccccccccccccHHEEEEccccccHHHccccEEEEEEcccccccc
Coil and Loop (DISEMBL)
mtkkaapkvgrHVLWFSWKLVTFFCIAFSLVALFRLHLrydisssavsrtrsrihydgpAKIAFLFLARRElpldflwgsffeiadvenfsifihsapgfvfdelttrskffygrqlsNSIQVAWGESSMIAAERLLLEAAledpanqrfvllsdscvpiynFSYVYKYLMASPRSFVDSFLdrkesrynpkmsptipkgkwrkgsQWITLIRRHAevivddeiiFPVFkkcckrrppldarkgkmnmCDYIRQRVSLLLKFSKQRLNAYSDLYFSPFKAIEKLF
Flexible Loop (DISEMBL)
mtkkaapkvgrhvLWFSWKLVTFFCIAFSLVALFRLHLRYdisssavsrtrsrihyDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDrkesrynpkmsptipkgkwrkgsQWITLIRRHaevivddeiifpvfkkcckrrppldarkgkmnmCDYIRQRVSLLLKFSKQRLnaysdlyfspfkaieklf
Low Complexity Region (SEG)
MTKKAAPKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIaaerllleaaleDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMCDYIRQRVSLLLKFSKQRLNAYSDLYFSPFKAIEKLF
Disordered region (IsUnstruct)
********VGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFL*****************GKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMCDYIRQRVSLLLKFSKQRLNAYSDLYFSPFKAI****
Disordered Region (DISOPRED)
***************FSWKLVTFFCIAFSLVALFRLH*************************AFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNS**VAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMCDYIRQRVSLLLKFSKQRLNAYSDLYFSPFKAIEKLF
Disordered Region (DISEMBL)
********VGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMCDYIRQRVSLLLKFSKQRLNAYSDLYFSPFKAIEKLF
Disordered Region (DISPRO)
*********GRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMCDYIRQRVSLLLKFSKQRLNAYSDLYFSPFKAI****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTKKAAPKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMCDYIRQRVSLLLKFSKQRLNAYSDLYFSPFKAIEKLF
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	285
225444319	380	PREDICTED: uncharacterized protein LOC10	0.870	0.652	0.714	1e-101
255554795	405	conserved hypothetical protein [Ricinus	0.866	0.609	0.699	9e-98
449433986	382	PREDICTED: uncharacterized protein LOC10	0.863	0.643	0.711	9e-97
224115850	386	predicted protein [Populus trichocarpa]	0.866	0.639	0.696	3e-96
356532315	377	PREDICTED: uncharacterized protein LOC10	0.817	0.618	0.676	5e-84
297849568	383	hypothetical protein ARALYDRAFT_312224 [	0.856	0.637	0.595	2e-82
30682534	383	Core-2/I-branching beta-1,6-N-acetylgluc	0.856	0.637	0.599	2e-82
3157941	364	Contains similarity to hypothetical prot	0.856	0.670	0.599	3e-82
356557935	360	PREDICTED: uncharacterized protein LOC10	0.687	0.544	0.770	1e-80
42570100	378	Core-2/I-branching beta-1,6-N-acetylgluc	0.856	0.645	0.586	1e-77

>gi|225444319|ref|XP_002264137.1| PREDICTED: uncharacterized protein LOC100262450 [Vitis vinifera] gi|302144098|emb|CBI23203.3| unnamed protein product [Vitis vinifera]

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/252 (71%), Positives = 201/252 (79%), Gaps = 4/252 (1%)

Query: 1   MTKKAAPKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRSRIH----Y 56
           MTKKA     RHV WF WKLV    +A  ++AL RL    ++SS ++     R +    Y
Sbjct: 1   MTKKAPSFSIRHVFWFGWKLVILVSVALCVLALLRLQSNSELSSISLPPQGPRFYRVSVY 60

Query: 57  DGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQ 116
            G  KIAFLFL RR LPLDFLWGSFFE AD  NFSI+IHS PGFVFDE T+RS+FFY RQ
Sbjct: 61  QGNPKIAFLFLVRRSLPLDFLWGSFFENADAANFSIYIHSQPGFVFDETTSRSRFFYNRQ 120

Query: 117 LSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRS 176
           LSNSIQVAWGESSMI AERLL EAALEDPANQRFVLLSDSCVP+YNFSY+Y Y+MASPRS
Sbjct: 121 LSNSIQVAWGESSMIQAERLLFEAALEDPANQRFVLLSDSCVPLYNFSYIYNYMMASPRS 180

Query: 177 FVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRR 236
           +VDSFLD KE RYNPKMSP IPK KWRKGSQWI+L+R HAEVIVDD++IF VFKK CKRR
Sbjct: 181 YVDSFLDVKEGRYNPKMSPVIPKAKWRKGSQWISLVRSHAEVIVDDQVIFSVFKKFCKRR 240

Query: 237 PPLDARKGKMNM 248
           PP+DARKGK N+
Sbjct: 241 PPIDARKGKQNI 252

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255554795|ref|XP_002518435.1| conserved hypothetical protein [Ricinus communis] gi|223542280|gb|EEF43822.1| conserved hypothetical protein [Ricinus communis]

 Score =  362 bits (929), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 184/263 (69%), Positives = 203/263 (77%), Gaps = 16/263 (6%)

Query: 1   MTKKAAPKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYD-----------ISSSAVSR 49
           MTKKA P   RHV+W  WKLV    ++  + AL RLH + D            SSS+  R
Sbjct: 14  MTKKAPPVPPRHVIWLGWKLVIILSVSLCVFALLRLHFQSDHYSSPSSSSSSSSSSSFYR 73

Query: 50  TRSRI-----HYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDE 104
            RSR+      + GP K+AFLFL R++LPLDFLWGSFFE ADV +FSIFIHS+PGF FDE
Sbjct: 74  PRSRLSRANLEFHGPPKLAFLFLVRQDLPLDFLWGSFFENADVASFSIFIHSSPGFEFDE 133

Query: 105 LTTRSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFS 164
            TTRS FFYGRQL NSIQVAWGESSMI AERLLL AALEDPANQRFVLLSDSCVP+YNFS
Sbjct: 134 STTRSHFFYGRQLKNSIQVAWGESSMIEAERLLLSAALEDPANQRFVLLSDSCVPLYNFS 193

Query: 165 YVYKYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEI 224
           Y+Y Y+MASPRSFVDSFLD KE RYN KMSP I K KWRKGSQWITLIR HAEVIVDDE+
Sbjct: 194 YIYSYVMASPRSFVDSFLDTKEDRYNQKMSPIIQKHKWRKGSQWITLIRSHAEVIVDDEV 253

Query: 225 IFPVFKKCCKRRPPLDARKGKMN 247
           IFP F+K CKRR PLDA KGK+N
Sbjct: 254 IFPEFQKYCKRRLPLDASKGKLN 276

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433986|ref|XP_004134777.1| PREDICTED: uncharacterized protein LOC101222689 [Cucumis sativus] gi|449479497|ref|XP_004155615.1| PREDICTED: uncharacterized protein LOC101225507 [Cucumis sativus]

 Score =  359 bits (921), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 180/253 (71%), Positives = 201/253 (79%), Gaps = 7/253 (2%)

Query: 1   MTKKAAPKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLR---YDISSSAVSRTRSRIHYD 57
           M KKA     R + WFSWKL+  F +A  + AL  LH      D++S+++SR R R   D
Sbjct: 1   MKKKALLTPPRSLFWFSWKLLVTFSLALCIFALVSLHSSPSTTDLASASLSR-RLRPPSD 59

Query: 58  ---GPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYG 114
              G  KIAFLFL RR LPLDFLWGSFFE  DV NFSI+IHSAPGFVFDE TTRS FF+G
Sbjct: 60  SFLGRPKIAFLFLTRRNLPLDFLWGSFFENGDVANFSIYIHSAPGFVFDESTTRSHFFFG 119

Query: 115 RQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASP 174
           RQL NSIQVAWG+SSMIAAERLLLEAALEDPANQRF+LLSDSCVP+YNFSY+Y YLMASP
Sbjct: 120 RQLENSIQVAWGKSSMIAAERLLLEAALEDPANQRFILLSDSCVPLYNFSYIYSYLMASP 179

Query: 175 RSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCK 234
           +SFVDSFLD KE RYNPKMSP IPK KWRKGSQWI+LIR HAEV+VDD+IIFP+F   CK
Sbjct: 180 KSFVDSFLDAKEGRYNPKMSPAIPKSKWRKGSQWISLIRSHAEVVVDDDIIFPIFGLFCK 239

Query: 235 RRPPLDARKGKMN 247
           RRPP+D  KG MN
Sbjct: 240 RRPPVDESKGIMN 252

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115850|ref|XP_002317140.1| predicted protein [Populus trichocarpa] gi|222860205|gb|EEE97752.1| predicted protein [Populus trichocarpa]

 Score =  357 bits (916), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 179/257 (69%), Positives = 198/257 (77%), Gaps = 10/257 (3%)

Query: 1   MTKKAA------PKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSAVSRTRS-- 52
           MTKK++       +  R V+W  WKLV    +   + ALFR+HL      + +SR RS  
Sbjct: 1   MTKKSSLLPILLQQSRRRVIWSGWKLVIILSMGLCVFALFRIHLS-SPPETLLSRRRSFS 59

Query: 53  -RIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKF 111
             + + GP KIAFLFL RR LPLDFLWGSFFE AD  NFSI +HS PGF FDE TTRS F
Sbjct: 60  REVVFSGPPKIAFLFLVRRGLPLDFLWGSFFENADTGNFSIHVHSEPGFEFDESTTRSHF 119

Query: 112 FYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLM 171
           FYGRQL NSIQV WGESSMI AERLLL+AALEDPANQRFVLLSDSCVP+YNFSY+Y YLM
Sbjct: 120 FYGRQLKNSIQVIWGESSMIEAERLLLDAALEDPANQRFVLLSDSCVPLYNFSYIYSYLM 179

Query: 172 ASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKK 231
           ASPRSFVDSFLD KE RY+PKMSP IPK KWRKGSQWI LIR HAEVIVDD +I PVFKK
Sbjct: 180 ASPRSFVDSFLDVKEGRYHPKMSPVIPKDKWRKGSQWIALIRSHAEVIVDDVVILPVFKK 239

Query: 232 CCKRRPPLDARKGKMNM 248
            CKRRPPLDA KGK+N+
Sbjct: 240 LCKRRPPLDATKGKLNI 256

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532315|ref|XP_003534719.1| PREDICTED: uncharacterized protein LOC100805897 [Glycine max]

 Score =  317 bits (811), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 165/244 (67%), Positives = 191/244 (78%), Gaps = 11/244 (4%)

Query: 11  RHVLWFSWKLVTFFCIAFSLV------ALFRLHLRYDISSSAVSRTRSRIHYDGPAKIAF 64
           RH +  S K++  F  + S V      +LFR H         +S + SR+ +DGP KIAF
Sbjct: 11  RHSI-ISRKMLILFSASLSCVVVLVICSLFRFHS----PKPPISISISRVVFDGPPKIAF 65

Query: 65  LFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVA 124
           LFL RR LPLDFLW +FF+  DV  FSI++HSAPGFV DE TTRS+F YGRQ+SNSIQV 
Sbjct: 66  LFLVRRNLPLDFLWDAFFQNVDVSRFSIYVHSAPGFVLDESTTRSQFLYGRQISNSIQVL 125

Query: 125 WGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDSFLDR 184
           WGESSMI AERLLL AALEDPANQRFVLLSDSCVP+YNFSYVY YLM SPRSFVDSFLD 
Sbjct: 126 WGESSMIQAERLLLAAALEDPANQRFVLLSDSCVPLYNFSYVYNYLMVSPRSFVDSFLDA 185

Query: 185 KESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKG 244
           KE RYNPKMSP IP+ KWRKGSQWIT++R+HAEV+VDD++IF VFKK CKRRPP+D  KG
Sbjct: 186 KEGRYNPKMSPKIPREKWRKGSQWITVVRKHAEVVVDDDVIFSVFKKYCKRRPPIDTSKG 245

Query: 245 KMNM 248
           K+N+
Sbjct: 246 KLNL 249

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297849568|ref|XP_002892665.1| hypothetical protein ARALYDRAFT_312224 [Arabidopsis lyrata subsp. lyrata] gi|297338507|gb|EFH68924.1| hypothetical protein ARALYDRAFT_312224 [Arabidopsis lyrata subsp. lyrata]

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 153/257 (59%), Positives = 196/257 (76%), Gaps = 13/257 (5%)

Query: 1   MTKKAAPKVG------RHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSS-----AVSR 49
           MT+K+ P++         V+W  WKLV  F +A  L+AL R+ L+Y+  ++     +V+R
Sbjct: 1   MTRKSQPQIQPPLSRRGGVVWLGWKLVIAFSVALCLLALLRIQLQYNSDTTLPSPLSVAR 60

Query: 50  TRSRIH-YDGP-AKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTT 107
           +++ +H Y G   K+AFLFLARR+LPLDF+W  FF+  D  NFSI+IHS PGFVF+E TT
Sbjct: 61  SQTPLHKYSGDRPKLAFLFLARRDLPLDFMWDRFFKGVDHANFSIYIHSLPGFVFNEETT 120

Query: 108 RSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVY 167
           RS++FY RQL+NSI+V WGESSMIAAERLLL +ALED +NQRFVLLSD C P+Y+F Y+Y
Sbjct: 121 RSQYFYNRQLNNSIKVVWGESSMIAAERLLLASALEDHSNQRFVLLSDRCAPLYDFGYIY 180

Query: 168 KYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFP 227
           +YL++SPRSFVDSFL  KE+RY+ KMSP IP+ KWRKGSQWI LIR HAEVIV+D I+FP
Sbjct: 181 RYLISSPRSFVDSFLHTKETRYSVKMSPVIPEEKWRKGSQWIDLIRSHAEVIVNDGIVFP 240

Query: 228 VFKKCCKRRPPLDARKG 244
           VFK+ CKR PPL   + 
Sbjct: 241 VFKEFCKRCPPLGTNEA 257

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30682534|ref|NP_172658.2| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gi|26450342|dbj|BAC42287.1| unknown protein [Arabidopsis thaliana] gi|28827514|gb|AAO50601.1| unknown protein [Arabidopsis thaliana] gi|332190698|gb|AEE28819.1| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana]

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 154/257 (59%), Positives = 195/257 (75%), Gaps = 13/257 (5%)

Query: 1   MTKKAAPKVG------RHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSS-----AVSR 49
           MTKK+ P++         V+W  WKLV  F +A  L+AL R+ L+Y+  ++     +V+R
Sbjct: 1   MTKKSQPQIPPPLSRRGGVVWLGWKLVIAFSVALCLLALLRIQLQYNSFTTLSFPLSVAR 60

Query: 50  TRSRIH-YDGP-AKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTT 107
           +++ +H Y G   K+AFLFLARR+LPLDF+W  FF+  D  NFSI+IHS PGFVF+E TT
Sbjct: 61  SQTPLHKYSGDRPKLAFLFLARRDLPLDFMWDRFFKGVDHANFSIYIHSVPGFVFNEETT 120

Query: 108 RSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVY 167
           RS++FY RQL+NSI+V WGESSMI AERLLL +ALED +NQRFVLLSD C P+Y+F Y+Y
Sbjct: 121 RSQYFYNRQLNNSIKVVWGESSMIEAERLLLASALEDHSNQRFVLLSDRCAPLYDFGYIY 180

Query: 168 KYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFP 227
           KYL++SPRSFVDSFL  KE+RY+ KMSP IP+ KWRKGSQWI LIR HAEVIV+D I+FP
Sbjct: 181 KYLISSPRSFVDSFLHTKETRYSVKMSPVIPEEKWRKGSQWIALIRSHAEVIVNDGIVFP 240

Query: 228 VFKKCCKRRPPLDARKG 244
           VFK+ CKR PPL   + 
Sbjct: 241 VFKEFCKRCPPLGTNEA 257

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3157941|gb|AAC17624.1| Contains similarity to hypothetical protein gb|U95973 from A. thaliana [Arabidopsis thaliana]

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 154/257 (59%), Positives = 195/257 (75%), Gaps = 13/257 (5%)

Query: 1   MTKKAAPKVG------RHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSS-----AVSR 49
           MTKK+ P++         V+W  WKLV  F +A  L+AL R+ L+Y+  ++     +V+R
Sbjct: 1   MTKKSQPQIPPPLSRRGGVVWLGWKLVIAFSVALCLLALLRIQLQYNSFTTLSFPLSVAR 60

Query: 50  TRSRIH-YDGP-AKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTT 107
           +++ +H Y G   K+AFLFLARR+LPLDF+W  FF+  D  NFSI+IHS PGFVF+E TT
Sbjct: 61  SQTPLHKYSGDRPKLAFLFLARRDLPLDFMWDRFFKGVDHANFSIYIHSVPGFVFNEETT 120

Query: 108 RSKFFYGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVY 167
           RS++FY RQL+NSI+V WGESSMI AERLLL +ALED +NQRFVLLSD C P+Y+F Y+Y
Sbjct: 121 RSQYFYNRQLNNSIKVVWGESSMIEAERLLLASALEDHSNQRFVLLSDRCAPLYDFGYIY 180

Query: 168 KYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFP 227
           KYL++SPRSFVDSFL  KE+RY+ KMSP IP+ KWRKGSQWI LIR HAEVIV+D I+FP
Sbjct: 181 KYLISSPRSFVDSFLHTKETRYSVKMSPVIPEEKWRKGSQWIALIRSHAEVIVNDGIVFP 240

Query: 228 VFKKCCKRRPPLDARKG 244
           VFK+ CKR PPL   + 
Sbjct: 241 VFKEFCKRCPPLGTNEA 257

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557935|ref|XP_003547265.1| PREDICTED: uncharacterized protein LOC100800690 [Glycine max]

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 151/196 (77%), Positives = 169/196 (86%)

Query: 53  RIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFF 112
           R+ +DGP KIAFLFL RR LPLDFLW +FF+  DV  FSI++HSAPGFV DE TTRS+ F
Sbjct: 37  RVVFDGPPKIAFLFLVRRNLPLDFLWDAFFQNGDVSRFSIYVHSAPGFVLDESTTRSQLF 96

Query: 113 YGRQLSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMA 172
           YGRQ+SNSIQV WGESSMI AERLLL AALED ANQRFVLLSDSCVP+YNFSYVY YLM 
Sbjct: 97  YGRQISNSIQVLWGESSMIQAERLLLAAALEDHANQRFVLLSDSCVPLYNFSYVYNYLMV 156

Query: 173 SPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKC 232
           SPRSFVDSFLD KE RYNPKMS  IP+ KWRKGSQWIT++R+HAEVIVDD++IF VFKK 
Sbjct: 157 SPRSFVDSFLDAKEGRYNPKMSTKIPREKWRKGSQWITVVRKHAEVIVDDDVIFSVFKKY 216

Query: 233 CKRRPPLDARKGKMNM 248
           CKRRPP+D  KGK+N+
Sbjct: 217 CKRRPPIDTSKGKLNL 232

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42570100|ref|NP_683459.2| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana] gi|49823486|gb|AAT68726.1| hypothetical protein At1g62305 [Arabidopsis thaliana] gi|58743302|gb|AAW81729.1| At1g62305 [Arabidopsis thaliana] gi|60547649|gb|AAX23788.1| hypothetical protein At1g62305 [Arabidopsis thaliana] gi|61656151|gb|AAX49378.1| At1g62305 [Arabidopsis thaliana] gi|332195830|gb|AEE33951.1| Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana]

 Score =  295 bits (755), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 152/259 (58%), Positives = 194/259 (74%), Gaps = 15/259 (5%)

Query: 7   PKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDISSSA--------VSRTR-SRIHYD 57
           P   R V+WF WK++     A  ++ALF ++ + + +++         V+R+R   + Y 
Sbjct: 5   PSSRRGVVWFRWKILITISTALCILALFCINRQSNSTATTTTLSSSLSVARSRIPLVKYS 64

Query: 58  GP-AKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQ 116
           G   K+AFLFLARR+LPLDFLW  FF+ AD  NFSI++HS PGFVFDE +TRS FFY RQ
Sbjct: 65  GDRPKLAFLFLARRDLPLDFLWDRFFKSADQRNFSIYVHSIPGFVFDESSTRSHFFYNRQ 124

Query: 117 LSNSIQVAWGESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRS 176
           L NSI+V WGESSMIAAERLLL +ALEDP+NQRFVLLSDSCVP+Y+F Y+Y+YL++SP+S
Sbjct: 125 LKNSIEVVWGESSMIAAERLLLASALEDPSNQRFVLLSDSCVPLYDFGYIYRYLVSSPKS 184

Query: 177 FVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRR 236
           FVDSFLD K++RY  KM P I K KWRKGSQWI+LIR HAEVIV+D+ +FPVF+K CKR 
Sbjct: 185 FVDSFLD-KDNRYTMKMFPVIRKEKWRKGSQWISLIRSHAEVIVNDDTVFPVFQKFCKRS 243

Query: 237 PPLDARKGKMNMCDYIRQR 255
            PLD RK  +    Y+++R
Sbjct: 244 LPLDPRKNWL----YLKKR 258

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	285
TAIR|locus:2008890	383	AT1G11940 [Arabidopsis thalian	0.838	0.624	0.579	2.2e-73
TAIR|locus:504956294	378	AT1G62305 [Arabidopsis thalian	0.856	0.645	0.563	8.6e-72
TAIR|locus:2222637	377	AT5G14550 [Arabidopsis thalian	0.792	0.599	0.489	3.3e-56
TAIR|locus:2027769	418	AT1G73810 [Arabidopsis thalian	0.6	0.409	0.426	9.8e-32
TAIR|locus:2197354	651	AT1G10880 [Arabidopsis thalian	0.652	0.285	0.395	8.7e-31
TAIR|locus:2181442	411	AT5G16170 [Arabidopsis thalian	0.652	0.452	0.415	8.8e-31
TAIR|locus:2012748	412	AT1G10280 [Arabidopsis thalian	0.614	0.424	0.401	1.8e-30
TAIR|locus:2128181	376	AT4G31350 [Arabidopsis thalian	0.610	0.462	0.383	3.8e-30
TAIR|locus:2165605	388	AT5G57270 [Arabidopsis thalian	0.617	0.453	0.385	5.6e-29
TAIR|locus:2059040	394	AT2G19160 [Arabidopsis thalian	0.589	0.426	0.395	1.9e-28

TAIR|locus:2008890 AT1G11940 [Arabidopsis thaliana (taxid:3702)]

 Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
 Identities = 146/252 (57%), Positives = 185/252 (73%)

Query:     1 MTKKAAPKV----GRH--VLWFSWKLVTFFCIAFSLVALFRLHLRYDISSS-----AVSR 49
             MTKK+ P++     R   V+W  WKLV  F +A  L+AL R+ L+Y+  ++     +V+R
Sbjct:     1 MTKKSQPQIPPPLSRRGGVVWLGWKLVIAFSVALCLLALLRIQLQYNSFTTLSFPLSVAR 60

Query:    50 TRSRIH-YDGPA-KIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTT 107
             +++ +H Y G   K+AFLFLARR+LPLDF+W  FF+  D  NFSI+IHS PGFVF+E TT
Sbjct:    61 SQTPLHKYSGDRPKLAFLFLARRDLPLDFMWDRFFKGVDHANFSIYIHSVPGFVFNEETT 120

Query:   108 RSKFFYGRQLSNSIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVY 167
             RS++FY RQL+NSI+V WGESSMI            D +NQRFVLLSD C P+Y+F Y+Y
Sbjct:   121 RSQYFYNRQLNNSIKVVWGESSMIEAERLLLASALEDHSNQRFVLLSDRCAPLYDFGYIY 180

Query:   168 KYLMASPRSFVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFP 227
             KYL++SPRSFVDSFL  KE+RY+ KMSP IP+ KWRKGSQWI LIR HAEVIV+D I+FP
Sbjct:   181 KYLISSPRSFVDSFLHTKETRYSVKMSPVIPEEKWRKGSQWIALIRSHAEVIVNDGIVFP 240

Query:   228 VFKKCCKRRPPL 239
             VFK+ CKR PPL
Sbjct:   241 VFKEFCKRCPPL 252

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:504956294 AT1G62305 [Arabidopsis thaliana (taxid:3702)]

 Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
 Identities = 146/259 (56%), Positives = 184/259 (71%)

Query:     7 PKVGRHVLWFSWKLVTFFCIAFSLVALFRLHLRYDIS------SSAVSRTRSRI---HYD 57
             P   R V+WF WK++     A  ++ALF ++ + + +      SS++S  RSRI    Y 
Sbjct:     5 PSSRRGVVWFRWKILITISTALCILALFCINRQSNSTATTTTLSSSLSVARSRIPLVKYS 64

Query:    58 GPA-KIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQ 116
             G   K+AFLFLARR+LPLDFLW  FF+ AD  NFSI++HS PGFVFDE +TRS FFY RQ
Sbjct:    65 GDRPKLAFLFLARRDLPLDFLWDRFFKSADQRNFSIYVHSIPGFVFDESSTRSHFFYNRQ 124

Query:   117 LSNSIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRS 176
             L NSI+V WGESSMI            DP+NQRFVLLSDSCVP+Y+F Y+Y+YL++SP+S
Sbjct:   125 LKNSIEVVWGESSMIAAERLLLASALEDPSNQRFVLLSDSCVPLYDFGYIYRYLVSSPKS 184

Query:   177 FVDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRR 236
             FVDSFLD K++RY  KM P I K KWRKGSQWI+LIR HAEVIV+D+ +FPVF+K CKR 
Sbjct:   185 FVDSFLD-KDNRYTMKMFPVIRKEKWRKGSQWISLIRSHAEVIVNDDTVFPVFQKFCKRS 243

Query:   237 PPLDARKGKMNMCDYIRQR 255
              PLD RK  +    Y+++R
Sbjct:   244 LPLDPRKNWL----YLKKR 258

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2222637 AT5G14550 [Arabidopsis thaliana (taxid:3702)]

 Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
 Identities = 117/239 (48%), Positives = 161/239 (67%)

Query:     8 KVGRHVLWFSWK------LVTFFCIA-FSLV-ALFR-LHLRYD-ISSSAVSRTRSRIHYD 57
             KV +  L + WK      L+  FC   F  + A F  +  R++ IS+S  S  + R+  D
Sbjct:     4 KVSQQKLLYRWKRKVYATLMFAFCFGTFVFIQARFASIQARFNRISASLDSLKKPRL--D 61

Query:    58 GPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQL 117
                +IAFLF+AR  LPL+F+W +FF+  D + FSI++HS PGFV +E TTRSK+F  RQL
Sbjct:    62 QRPQIAFLFIARNRLPLEFVWDAFFKGEDGK-FSIYVHSRPGFVLNEATTRSKYFLDRQL 120

Query:   118 SNSIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSF 177
             ++SIQV WGES+MI            D  N RFV LSDSC+P+Y+FSY Y Y+M++P SF
Sbjct:   121 NDSIQVDWGESTMIEAERVLLRHALRDSFNHRFVFLSDSCIPLYSFSYTYNYIMSTPTSF 180

Query:   178 VDSFLDRKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRR 236
             VDSF D K+SRYNP+M+P IP   WRKGSQW+ L R+HAE++V+D  +FP+F++ C+R+
Sbjct:   181 VDSFADTKDSRYNPRMNPIIPVRNWRKGSQWVVLNRKHAEIVVNDTSVFPMFQQHCRRK 239

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0007623 "circadian rhythm" evidence=RCA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2027769 AT1G73810 [Arabidopsis thaliana (taxid:3702)]

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 75/176 (42%), Positives = 101/176 (57%)

Query:    61 KIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNS 120
             K AF+FL R +LPL  LW  FF+      FSI+IH++  F FD+ T  +  FY R++ + 
Sbjct:   147 KAAFMFLTRGKLPLAKLWERFFK-GHEGLFSIYIHTSDPFYFDDHTPETSPFYRRRIPSK 205

Query:   121 IQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDS 180
              +V WG  SM+            D  N RFVLLS+S +P++NFS +Y YL+ S  S+VD 
Sbjct:   206 -EVGWGMVSMVAAERRLLANALLDAGNHRFVLLSESDIPLFNFSTIYSYLINSQHSYVDV 264

Query:   181 F-LDRK--ESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCC 233
             + L       RYN +MSP I +  WRKGSQW  + R  A  +V D   FPVF+K C
Sbjct:   265 YDLPGPAGRGRYNRRMSPVISRTNWRKGSQWFEIDREVALAVVSDTTYFPVFEKYC 320

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2197354 AT1G10880 [Arabidopsis thaliana (taxid:3702)]

 Score = 346 (126.9 bits), Expect = 8.7e-31, P = 8.7e-31
 Identities = 78/197 (39%), Positives = 109/197 (55%)

Query:    46 AVSRTRSRIHYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENF-SIFIHSAPGFVFDE 104
             A    RS +  +   K+AF+FL R  LPL  LW  FF+    E F SI++H++P F  + 
Sbjct:   103 AAMAPRSPMKNETHPKVAFMFLTRWNLPLSPLWEMFFK--GHEGFYSIYVHTSPEFTQEP 160

Query:   105 LTTRSKFFYGRQLSNSIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFS 164
                 S  FY +++ +   V WG+ SM+            +P+N RFVLLS++C+P++NF+
Sbjct:   161 --PESSVFYKKRIPSKA-VEWGKCSMMDAEKRLISHALLEPSNARFVLLSETCIPLFNFT 217

Query:   165 YVYKYLMASPRSFVDSFLDRK---ESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVD 221
              +Y YL  S RSF+ SF D +     RY PKM P +    WRKG+QW  + RR A  IV 
Sbjct:   218 TIYTYLTRSTRSFLGSFDDPRPMGRGRYTPKMLPHVSLSDWRKGNQWFEISRRVAAEIVS 277

Query:   222 DEIIFPVFKKCCKRRPP 238
             D   + VFK  C  RPP
Sbjct:   278 DRRYYAVFKDHC--RPP 292

GO:0005634 "nucleus" evidence=ISM

GO:0009651 "response to salt stress" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2181442 AT5G16170 [Arabidopsis thaliana (taxid:3702)]

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 84/202 (41%), Positives = 111/202 (54%)

Query:    43 SSSAVSRTRSRIHYDGP--AKIAFLFLARRELPLDFLWGSFFEIADVENF-SIFIHSAPG 99
             SSS + R   R + DG    K+AF+F+    LPL  LW  FFE    E F SI++H+ P 
Sbjct:   119 SSSWLGR---RHNNDGKMAVKVAFMFMTGGRLPLAGLWEKFFE--GHEGFYSIYVHTNPS 173

Query:   100 FVFDELTTRSKFFYGRQLSNSIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVP 159
             F  D     S  FY R++ +   V WG SSM+            D +NQRFVLLSDSC+P
Sbjct:   174 FQ-DSFPETS-VFYSRRIPSQ-PVYWGTSSMVDAEKRLLANALLDESNQRFVLLSDSCIP 230

Query:   160 IYNFSYVYKYLMASPRSFVDSFLDRKES---RYNPKMSPTIPKGKWRKGSQWITLIRRHA 216
             +YNF+ +Y YL  +  SF+ SF D ++S   RYN  M P I    WRKGSQW    R  A
Sbjct:   231 LYNFTTIYDYLTGTNLSFIGSFDDPRKSGRGRYNHTMYPHINITHWRKGSQWFETTRELA 290

Query:   217 EVIVDDEIIFPVFKKCCKRRPP 238
               I++D + + +F + CK  PP
Sbjct:   291 LHIIEDTVYYKIFDQHCK--PP 310

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2012748 AT1G10280 [Arabidopsis thaliana (taxid:3702)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 73/182 (40%), Positives = 104/182 (57%)

Query:    56 YDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGR 115
             YD   K+AF+FL R  LP+  LW  FF+  + +  S+++H+ PG+  D   +R   FY R
Sbjct:   138 YDRVPKVAFMFLTRGPLPMLPLWEKFFK-GNEKYLSVYVHTPPGY--DMNVSRDSPFYDR 194

Query:   116 QLSNSIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPR 175
             Q+ +  +V WG   +             D +N+RFVLLS+SCVP+YNFS VY YL+ S  
Sbjct:   195 QIPSQ-RVEWGSPLLTDAEKRLLANALLDFSNERFVLLSESCVPVYNFSTVYTYLINSAY 253

Query:   176 SFVDSFLDRKE---SRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKC 232
             SFVDS+ +       RY+ KM P I    WRKGSQW  + R+ A  I+ D   + +FK+ 
Sbjct:   254 SFVDSYDEPTRYGRGRYSRKMLPDIKLHHWRKGSQWFEVNRKIAIYIISDSKYYSLFKQF 313

Query:   233 CK 234
             C+
Sbjct:   314 CR 315

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2128181 AT4G31350 [Arabidopsis thaliana (taxid:3702)]

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 71/185 (38%), Positives = 107/185 (57%)

Query:    61 KIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNS 120
             K+AF+FL    LP + LW  FF       FS+++H++       + T S +F GR + +S
Sbjct:    89 KLAFMFLTPGTLPFEPLWEMFFR-GHENKFSVYVHASKK---SPVHT-SSYFVGRDI-HS 142

Query:   121 IQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVDS 180
              +VAWG+ SM+            DP NQ F+LLSDSCVP+++F+Y+Y +L+ +  SF+D 
Sbjct:   143 HKVAWGQISMVDAERRLLAHALVDPDNQHFILLSDSCVPLFDFNYIYNHLIFANLSFIDC 202

Query:   181 FLD---RKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRP 237
             F D       RY+  M P + K  +RKGSQW ++ RRHA V++ D + +  FK  C  RP
Sbjct:   203 FEDPGPHGSGRYSQHMLPEVEKKDFRKGSQWFSMKRRHAIVVMADSLYYTKFKLYC--RP 260

Query:   238 PLDAR 242
              ++ R
Sbjct:   261 NMEGR 265

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2165605 AT5G57270 [Arabidopsis thaliana (taxid:3702)]

 Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
 Identities = 72/187 (38%), Positives = 105/187 (56%)

Query:    60 AKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSN 119
             +KIAF+FL    LP + LW  FF+      FSI+IH  P  +       S+ F  R++ +
Sbjct:    97 SKIAFMFLTPGTLPFEKLWDKFFQ-GQEGRFSIYIH--PSRL--RPVHISRHFSDREI-H 150

Query:   120 SIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVD 179
             S  V WG  SM+            DP NQ FVLLS+SC+P++ F Y Y+YLM +  SF+D
Sbjct:   151 SDHVTWGRISMVDAERRLLANALEDPDNQHFVLLSESCIPLHTFDYTYRYLMHANVSFID 210

Query:   180 SFLD---RKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRR 236
             SF D       R+   M P IP+  +RKG+QW T+ R+HA +++ D + +  F++ C  R
Sbjct:   211 SFEDLGPHGTGRHMDHMLPEIPRQDFRKGAQWFTMKRQHAVIVMADGLYYSKFREYC--R 268

Query:   237 PPLDARK 243
             P ++A K
Sbjct:   269 PGVEANK 275

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2059040 AT2G19160 [Arabidopsis thaliana (taxid:3702)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 70/177 (39%), Positives = 99/177 (55%)

Query:    60 AKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSN 119
             +KIAF+FL    LP + LW  FF+      FS++IH++     D     S++F  R++  
Sbjct:   105 SKIAFMFLTPGTLPFEKLWDLFFQ-GHEGKFSVYIHASK----DTPVHTSRYFLNREI-R 158

Query:   120 SIQVAWGESSMIXXXXXXXXXXXXDPANQRFVLLSDSCVPIYNFSYVYKYLMASPRSFVD 179
             S +V WG  SMI            DP NQ+FVLLSDSCVP+ +F Y+Y Y+M S  S+VD
Sbjct:   159 SDEVVWGRISMIDAERRLLTNALRDPENQQFVLLSDSCVPLRSFEYMYNYMMHSNVSYVD 218

Query:   180 SFLD---RKESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCC 233
              F D       R+   M P IP+  +RKG+QW ++ R+HA V V D + +  F+  C
Sbjct:   219 CFDDPGPHGTGRHMDHMLPEIPREDFRKGAQWFSMKRQHAVVTVADNLYYSKFRDYC 275

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00006882001 SubName- Full=Chromosome chr10 scaffold_179, whole genome shotgun sequence; (380 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	285
pfam02485	242	pfam02485, Branch, Core-2/I-Branching enzyme	5e-53

>gnl|CDD|217062 pfam02485, Branch, Core-2/I-Branching enzyme

 Score =  172 bits (439), Expect = 5e-53
 Identities = 76/187 (40%), Positives = 101/187 (54%), Gaps = 16/187 (8%)

Query: 62  IAFLFLA-RRELPLDFLWGSFFEIADVEN-FSIFIHS-APGFVFDELTTR-SKFFYGRQL 117
           IAF+FL  + +LP   LW  FF     +N + I++ + +P    + L    S FF  R +
Sbjct: 1   IAFMFLVYKGDLPFLPLWLRFFYHP--QNLYCIYVDAKSPSEFKERLRALASCFFNVRVI 58

Query: 118 SNSIQVAWGESSMIAAERLLLEAALE-DPANQRFVLLSDSCVPIYNFSYVYKYLMASPR- 175
             S  V WG  SM+ AER LL   L  DP+   FVLLS+S +P+  F  +Y+YL +    
Sbjct: 59  PKSEPVTWGGHSMVDAERRLLANLLLLDPSWDYFVLLSESDIPLKTFDELYRYLSSLNGN 118

Query: 176 -SFVDSFLD--RKES-RYNPKMSPTIPK----GKWRKGSQWITLIRRHAEVIVDDEIIFP 227
            SFV+SF D   K   RYNP+M P I       KWRKGSQW  L R  AE +V D + +P
Sbjct: 119 NSFVESFDDPGWKGRGRYNPRMLPEIKLSDLPLKWRKGSQWFVLSRAFAEYVVSDNLYYP 178

Query: 228 VFKKCCK 234
           +FK  C 
Sbjct: 179 LFKYYCN 185

This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. Length = 242

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	285
PF02485	244	Branch: Core-2/I-Branching enzyme; InterPro: IPR00	100.0
PLN03183	421	acetylglucosaminyltransferase family protein; Prov	100.0
KOG0799	439	consensus Branching enzyme [Carbohydrate transport	99.89

>PF02485 Branch: Core-2/I-Branching enzyme; InterPro: IPR003406 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=100.00  E-value=4e-40  Score=296.90  Aligned_cols=189  Identities=26%  Similarity=0.399  Sum_probs=124.1

Q ss_pred             EEEEEEeCC-CCChHHHHHHhhhhcCCCceEEEEEeCCCCCc---ccc----ccCCcceeccccCCceeeecCcccHHHH
Q 023235           62 IAFLFLARR-ELPLDFLWGSFFEIADVENFSIFIHSAPGFVF---DEL----TTRSKFFYGRQLSNSIQVAWGESSMIAA  133 (285)
Q Consensus        62 iAfLiLah~-~~~~~~l~~rl~~~ld~~~~~IyIHvD~k~~~---~~~----~~~~~vf~~r~I~~rv~V~WGg~SlV~A  133 (285)
                      |||||+||+ +++|   ++++++.++++++.+|||||+|++.   +..    ...++++   ++++|++|.|||+|||+|
T Consensus         1 iAylil~h~~~~~~---~~~l~~~l~~~~~~f~iHiD~k~~~~~~~~~~~~~~~~~nv~---~v~~r~~v~WG~~S~v~A   74 (244)
T PF02485_consen    1 IAYLILAHKNDPEQ---LERLLRLLYHPDNDFYIHIDKKSPDYFYEEIKKLISCFPNVH---FVPKRVDVRWGGFSLVEA   74 (244)
T ss_dssp             EEEEEEESS--HHH---HHHHHHHH--TTSEEEEEE-TTS-HHHHHHHHHHHCT-TTEE---E-SS-----TTSHHHHHH
T ss_pred             CEEEEEecCCCHHH---HHHHHHHhcCCCCEEEEEEcCCCChHHHHHHHHhcccCCcee---ecccccccccCCccHHHH
Confidence            799999988 7778   8999999998899999999999651   111    1234444   678899999999999999


Q ss_pred             HHHHHHHHhc-CCCCCEEEEecCCCccCCChHHHHHHHhcC--CCCceeccccCCC---CccCCC----CCCCCCCCccc
Q 023235          134 ERLLLEAALE-DPANQRFVLLSDSCVPIYNFSYVYKYLMAS--PRSFVDSFLDRKE---SRYNPK----MSPTIPKGKWR  203 (285)
Q Consensus       134 tl~LL~~AL~-d~~~~yf~LLSGsD~PL~s~~~I~~fL~~~--~~sFI~~~~~~~~---~RY~~~----m~p~i~~~~~~  203 (285)
                      |+.||++|++ +++|+|||+|||+|+||+|+++|++||+.+  +.+|+++......   .||...    +.+.+...+++
T Consensus        75 ~l~ll~~al~~~~~~~y~~llSg~D~Pl~s~~~i~~~l~~~~~~~~f~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~  154 (244)
T PF02485_consen   75 TLNLLREALKRDGDWDYFILLSGQDYPLKSNEEIHEFLESNNGDNNFIESFSDEDPRESGRYNPRIYDPFRPFFRKRTLY  154 (244)
T ss_dssp             HHHHHHHHHHH-S---EEEEEETTEEESS-HHHHHHHHHHTTT--B---BEE--GGGG-HHHHEEEETTEEEEEEEE--E
T ss_pred             HHHHHHHHHhcCCCCcEEEEcccccccccchHHHHHHHHhcCCCCcceecccccccchhhcceeeeeeeccccccccccc
Confidence            9999999999 789999999999999999999999999997  3788988654321   455432    22223334899


Q ss_pred             ccCceeeecHHHHHHhhcCcchHHHHhhhcCCCCCCccccCCCCccchhHhhhhhhHHhhH
Q 023235          204 KGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMCDYIRQRVSLLLKFSK  264 (285)
Q Consensus       204 ~GSQW~sLtR~~a~yIl~d~~~~~~Fk~~c~d~~~~d~~e~~~~~e~~l~tl~~~~~~~~~  264 (285)
                      +|||||+|||++|+||++|....+.++++|...++        +||.|++|++.+...+.+
T Consensus       155 ~GSqW~~Ltr~~v~~il~~~~~~~~~~~~~~~~~~--------pDE~ffqTll~n~~~~~~  207 (244)
T PF02485_consen  155 KGSQWFSLTRDFVEYILDDPNYRPKLKKYFRFSLC--------PDESFFQTLLNNSGHFKD  207 (244)
T ss_dssp             EE-S--EEEHHHHHHHHH-HHHHHHHHHHT-TSSS--------GGGTHHHHH--SSGGG-B
T ss_pred             ccceeeEeeHHHHHHhhhhHHHHHHHHHhhcCccC--------cchhhHHHhhcccchhcc
Confidence            99999999999999999888888888888744333        678999999887754443

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase family 14 GT14 from CAZY, a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme (2.4.1.150 from EC) and core-2 branching enzyme (2.4.1.102 from EC). I-branching enzyme, an integral membrane protein, converts linear into branched poly-N-acetyllactosaminoglycans in the glycosylation pathway, and is responsible for the production of the blood group I-antigen during embryonic development []. Core-2 branching enzyme, also an integral membrane protein, forms crucial side-chain branches in O-glycans in the glycosylation pathway [].; GO: 0008375 acetylglucosaminyltransferase activity, 0016020 membrane; PDB: 3OTK_D 2GAM_A 2GAK_B.

>PLN03183 acetylglucosaminyltransferase family protein; Provisional

Probab=100.00  E-value=5.8e-36  Score=290.89  Aligned_cols=189  Identities=15%  Similarity=0.140  Sum_probs=145.1

Q ss_pred             CCCeEEEEEEeC-CCCChHHHHHHhhhhcCCCceEEEEEeCCCCCccc------c-------ccCCcceeccccCCceee
Q 023235           58 GPAKIAFLFLAR-RELPLDFLWGSFFEIADVENFSIFIHSAPGFVFDE------L-------TTRSKFFYGRQLSNSIQV  123 (285)
Q Consensus        58 ~~~KiAfLiLah-~~~~~~~l~~rl~~~ld~~~~~IyIHvD~k~~~~~------~-------~~~~~vf~~r~I~~rv~V  123 (285)
                      .++||||||++| ++.+|   ++||++.+|++++.||||+|+|++..+      .       ...+||+   ++.++..|
T Consensus        76 ~~~r~AYLI~~h~~d~~~---l~RLL~aLYhprN~y~IHlDkKS~~~er~~l~~~v~~~~~~~~~~NV~---vl~k~~~V  149 (421)
T PLN03183         76 KLPRFAYLVSGSKGDLEK---LWRTLRALYHPRNQYVVHLDLESPAEERLELASRVENDPMFSKVGNVY---MITKANLV  149 (421)
T ss_pred             CCCeEEEEEEecCCcHHH---HHHHHHHhcCCCceEEEEecCCCChHHHHHHHHHhhccchhhccCcEE---EEecceee
Confidence            479999999999 67788   999999999999999999999986421      0       1234665   56778899


Q ss_pred             ecCcccHHHHHHHHHHHHhc-CCCCCEEEEecCCCccCCChHH-HHHHHhcC-CCCceeccccCC---CCccCCC-----
Q 023235          124 AWGESSMIAAERLLLEAALE-DPANQRFVLLSDSCVPIYNFSY-VYKYLMAS-PRSFVDSFLDRK---ESRYNPK-----  192 (285)
Q Consensus       124 ~WGg~SlV~Atl~LL~~AL~-d~~~~yf~LLSGsD~PL~s~~~-I~~fL~~~-~~sFI~~~~~~~---~~RY~~~-----  192 (285)
                      .|||+|||+||+++|+.+|+ ..+|+|||+|||+||||+++++ |+.|+..+ ++|||++..+.+   ..|+.+.     
T Consensus       150 ~WGG~S~V~AtL~~m~~LL~~~~~WDyfinLSGsDyPLkTqdelI~~F~~~nr~~NFI~~~s~~~wk~~~r~~~~i~~pg  229 (421)
T PLN03183        150 TYRGPTMVANTLHACAILLKRSKDWDWFINLSASDYPLVTQDDLIHTFSTLDRNLNFIEHTSQLGWKEEKRAMPLIIDPG  229 (421)
T ss_pred             ccCChHHHHHHHHHHHHHHhhCCCCCEEEEccCCcccccCHHHHHHHHHhCCCCceeeecccccccchhhhcceEEecCc
Confidence            99999999999999999998 4799999999999999999999 56777764 589999754321   1222110     


Q ss_pred             ---------CC----CC-CCCCcccccCceeeecHHHHHHhhc--C--cchHHHHhhhcCCCCCCccccCCCCccchhHh
Q 023235          193 ---------MS----PT-IPKGKWRKGSQWITLIRRHAEVIVD--D--EIIFPVFKKCCKRRPPLDARKGKMNMCDYIRQ  254 (285)
Q Consensus       193 ---------m~----p~-i~~~~~~~GSQW~sLtR~~a~yIl~--d--~~~~~~Fk~~c~d~~~~d~~e~~~~~e~~l~t  254 (285)
                               ++    .. +.+.++++|||||+|||++|+||++  |  ++....|.+.+.           .+||.|+.|
T Consensus       230 l~~~~ks~~~~~~~~R~~P~~~~lf~GS~W~sLSR~fvey~l~~~dnlpr~ll~y~~~t~-----------~pdE~fFqT  298 (421)
T PLN03183        230 LYSTNKSDIYWVTPRRSLPTAFKLFTGSAWMVLSRSFVEYCIWGWDNLPRTLLMYYTNFV-----------SSPEGYFHT  298 (421)
T ss_pred             eeecccchhhhhhhhccCCccccccCCCceEEecHHHHHHHHhcccchHHHHHHHHhcCC-----------CCchHHHHH
Confidence                     00    01 2468899999999999999999996  3  455555555221           245689999


Q ss_pred             hhhhhHHhh
Q 023235          255 RVSLLLKFS  263 (285)
Q Consensus       255 l~~~~~~~~  263 (285)
                      .+.+...+.
T Consensus       299 Vl~NS~~f~  307 (421)
T PLN03183        299 VICNVPEFA  307 (421)
T ss_pred             HHhhccccc
Confidence            988776544

>KOG0799 consensus Branching enzyme [Carbohydrate transport and metabolism]

Probab=99.89  E-value=6.2e-23  Score=201.51  Aligned_cols=188  Identities=16%  Similarity=0.116  Sum_probs=144.8

Q ss_pred             CeEEEEEEeCCCCChHHHHHHhhhhcCCCceEEEEEeCCCCCcc--cc-ccCCcceecc-ccCCceeeecCcccHHHHHH
Q 023235           60 AKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFD--EL-TTRSKFFYGR-QLSNSIQVAWGESSMIAAER  135 (285)
Q Consensus        60 ~KiAfLiLah~~~~~~~l~~rl~~~ld~~~~~IyIHvD~k~~~~--~~-~~~~~vf~~r-~I~~rv~V~WGg~SlV~Atl  135 (285)
                      --+||+.++|++.++   ++|++++++++++.++||+|+++...  .. ..-..+|.|. .++++..|.|||.|+++|++
T Consensus       103 ~~~a~~~~v~kd~~~---verll~aiYhPqN~ycihvD~~s~~~fk~~~~~L~~cf~NV~v~~k~~~v~~~G~s~l~a~l  179 (439)
T KOG0799|consen  103 FPAAFLRVVYKDYEQ---VERLLQAIYHPQNVYCIHVDAKSPPEFRVAMQQLASCFPNVIVLPKRESVTYGGHSILAAHL  179 (439)
T ss_pred             cceEEEEeecccHHH---HHHHHHHHhCCcCcceEEECCCCCHHHHHHHHHHHhcCCceEEeccccceecCCchhhHHHH
Confidence            357888999999999   99999999999999999999998632  11 1223444443 34679999999999999999


Q ss_pred             HHHHHHhcC-CCCCEEEEecCCCccCCChHHHHHHHhc-CCCCceeccccCC--CCc--c-C-----------CCCCCC-
Q 023235          136 LLLEAALED-PANQRFVLLSDSCVPIYNFSYVYKYLMA-SPRSFVDSFLDRK--ESR--Y-N-----------PKMSPT-  196 (285)
Q Consensus       136 ~LL~~AL~d-~~~~yf~LLSGsD~PL~s~~~I~~fL~~-~~~sFI~~~~~~~--~~R--Y-~-----------~~m~p~-  196 (285)
                      ++|+.+++. .+|+||++|||+|+||+|+.+|.+.|.. ++.+||+.....+  ..|  + .           ..+++. 
T Consensus       180 ~c~~~Ll~~~~~W~yfinLs~~D~PlkT~~elv~i~~~L~g~N~i~~~~~~~~~~~~~~k~~~~~~~~~~~~s~~~~~~l  259 (439)
T KOG0799|consen  180 NCLADLLKLSGDWDYFINLSNSDYPLKTNDELVRIFKILRGANFVEHTSEIGWKLNRKAKWDIIDLKYFRNKSPLPWVIL  259 (439)
T ss_pred             HHHHHHHhcCCCCceeeeccCCCcccCCHHHHHHHHHHcCCcccccCcccccHHHhcccCCcccccchheecCCCccccC
Confidence            999999985 5799999999999999999999999988 8899999744221  111  1 1           011122 


Q ss_pred             CCCCcccccCceeeecHHHHHHhhcCcchHHHHhhhcCCCCCCccccCCCCccchhHhhhhhh
Q 023235          197 IPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMCDYIRQRVSLL  259 (285)
Q Consensus       197 i~~~~~~~GSQW~sLtR~~a~yIl~d~~~~~~Fk~~c~d~~~~d~~e~~~~~e~~l~tl~~~~  259 (285)
                      +.+.++++||.|++|+|++|+|++.+......++.+- +..        .+||+|+.|+..+.
T Consensus       260 p~~~ki~~Gs~~~~LsR~fv~y~i~~~~~~~ll~~~~-~t~--------~~dE~f~~Tl~~n~  313 (439)
T KOG0799|consen  260 PTALKLFKGSAWVSLSRAFVEYLISGNLPRTLLMYYN-NTY--------SPDEGFFHTLQCNP  313 (439)
T ss_pred             CCceEEEecceeEEEeHHHHHHHhcCccHHHHHHHHh-Ccc--------CcchhhhHhhhccc
Confidence            3468899999999999999999999854333333332 332        36789999999887

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	285
2gak_A	391	Beta-1,6-N-acetylglucosaminyltransferase; glycopro	2e-14
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04

>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A* Length = 391

 Score = 71.8 bits (175), Expect = 2e-14
 Identities = 30/210 (14%), Positives = 65/210 (30%), Gaps = 30/210 (14%)

Query: 50  TRSRIHYDGPAKIAFLFLARRELP-LDFLWGSFFEIADVENFSIFIH---SAPGFVFDEL 105
                  +    IA+  +   ++  LD L  +   I   +NF   IH    A       +
Sbjct: 74  VEPLTKEEVGFPIAYSIVVHHKIEMLDRLLRA---IYMPQNF-YCIHVDRKAEESFLAAV 129

Query: 106 TTRSKFFYG-RQLSNSIQVAWGESSMIAAERLLLEAALEDPAN-QRFVLLSDSCVPIYNF 163
              +  F      S    V +   + + A+   ++      AN +  + L     PI   
Sbjct: 130 QGIASCFDNVFVASQLESVVYASWTRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTN 189

Query: 164 SYVYKYLMASPR-SFVDSF----------------LDRKESRYNPKMSPTIPKGKWRKGS 206
             + + L  S   + +++                 +D K +      +P   K     GS
Sbjct: 190 LEIVRKLKCSTGENNLETEKMPPNKEERWKKRYAVVDGKLTNTGIVKAPPPLKTPLFSGS 249

Query: 207 QWITLIRRHAEVIVDDE---IIFPVFKKCC 233
            +  + R +   ++++E    +    +   
Sbjct: 250 AYFVVTREYVGYVLENENIQKLMEWAQDTY 279

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 39.8 bits (92), Expect = 7e-04
 Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 29/171 (16%)

Query: 74  LDFLWGSFFEIADVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIAA 133
           L  +W    +  DV      +H     V  +    +       L   +++     +  A 
Sbjct: 392 LSLIWFDVIKS-DVMVVVNKLHKY-SLVEKQPKESTISIPSIYLELKVKL----ENEYAL 445

Query: 134 ERLLLEAALEDPANQRFVLLSDSCVPIYNFSYVYKYL---MAS----------PRSFVD- 179
            R +++       N      SD  +P Y   Y Y ++   + +             F+D 
Sbjct: 446 HRSIVDHY-----NIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDF 500

Query: 180 SFLDRK----ESRYNPKMSPTIPKGKWRKGSQWITLIRRHAEVIVDDEIIF 226
            FL++K     + +N   S      + +    +I       E +V+  + F
Sbjct: 501 RFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDF 551

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	285
2gak_A	391	Beta-1,6-N-acetylglucosaminyltransferase; glycopro	100.0

>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*

Probab=100.00  E-value=5.8e-40  Score=315.92  Aligned_cols=190  Identities=11%  Similarity=0.041  Sum_probs=151.3

Q ss_pred             CCCeEEEEEEeCCCCChHHHHHHhhhhcCCCceEEEEEeCCCCCcc--ccc-cCCcceeccc-cCCceeeecCcccHHHH
Q 023235           58 GPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFD--ELT-TRSKFFYGRQ-LSNSIQVAWGESSMIAA  133 (285)
Q Consensus        58 ~~~KiAfLiLah~~~~~~~l~~rl~~~ld~~~~~IyIHvD~k~~~~--~~~-~~~~vf~~r~-I~~rv~V~WGg~SlV~A  133 (285)
                      .++||||||++|+++++   |+||+++++++++.||||+|++++..  ... .....|.|++ +++|+.|.|||+|||+|
T Consensus        82 ~~~kiAflil~h~d~~~---l~rll~~ly~p~n~y~IHvD~ks~~~~~~~~~~~~~~f~NV~v~~~~~~v~WGg~S~v~A  158 (391)
T 2gak_A           82 VGFPIAYSIVVHHKIEM---LDRLLRAIYMPQNFYCIHVDRKAEESFLAAVQGIASCFDNVFVASQLESVVYASWTRVKA  158 (391)
T ss_dssp             HTSCEEEEEEECSCHHH---HHHHHHHHCCTTSEEEEEECTTSCHHHHHHHHHHHHTCTTEEECSSCCCCCTTSHHHHHH
T ss_pred             cCCCEEEEEEecCCHHH---HHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHHHHHhcCCCEEEeccCcccccCCchHHHH
Confidence            35899999999999988   99999999999999999999998632  111 1122344444 45899999999999999


Q ss_pred             HHHHHHHHhcC-CCCCEEEEecCCCccCCChHHHHHHHhc-CCCCceeccccCC--CCcc--CCC-----C-----C--C
Q 023235          134 ERLLLEAALED-PANQRFVLLSDSCVPIYNFSYVYKYLMA-SPRSFVDSFLDRK--ESRY--NPK-----M-----S--P  195 (285)
Q Consensus       134 tl~LL~~AL~d-~~~~yf~LLSGsD~PL~s~~~I~~fL~~-~~~sFI~~~~~~~--~~RY--~~~-----m-----~--p  195 (285)
                      |++||+.||++ .+|+|||||||+|+||+|+++|++||+. +++|||+++.+++  ..|+  +..     +     .  +
T Consensus       159 ~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~~~~~~nFIe~~~~~~~~~~R~~~~~~~~~~~l~~~~~~k~~  238 (391)
T 2gak_A          159 DLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKCSTGENNLETEKMPPNKEERWKKRYAVVDGKLTNTGIVKAP  238 (391)
T ss_dssp             HHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHHHTTTCCBCCBEECCGGGSHHHHEEEEEETTEEEEEEEECCC
T ss_pred             HHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHHhcCCCceeeccCCCcccccceEeeeeccccceeeecccccC
Confidence            99999999985 5999999999999999999999999998 5799999876542  2342  210     0     0  1


Q ss_pred             CCCCCcccccCceeeecHHHHHHhhcCcchHHHHhhhcCCCCCCccccCCCCccchhHhhhhhh
Q 023235          196 TIPKGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMCDYIRQRVSLL  259 (285)
Q Consensus       196 ~i~~~~~~~GSQW~sLtR~~a~yIl~d~~~~~~Fk~~c~d~~~~d~~e~~~~~e~~l~tl~~~~  259 (285)
                      .+...++++|||||+|||++|++|++|.. .+.|..+|.+.++        +||+|++|++.++
T Consensus       239 ~P~~~~~~~GSqW~~LtR~~v~~vl~d~~-~~~~~~~~k~t~~--------pDE~ffqTll~~~  293 (391)
T 2gak_A          239 PPLKTPLFSGSAYFVVTREYVGYVLENEN-IQKLMEWAQDTYS--------PDEFLWATIQRIP  293 (391)
T ss_dssp             CSCSSCCEECCSCCEEEHHHHHHHHHCHH-HHHHHHHHTTSSS--------GGGTHHHHHTTST
T ss_pred             CccccceecccceeEecHHHHHHHHhCCc-HHHHHHHHcCCcC--------CchhHHHHHhhcc
Confidence            12367899999999999999999999854 5666677766554        6789999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	285
d1qg8a_	255	Spore coat polysaccharide biosynthesis protein Sps	81.2

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Spore coat polysaccharide biosynthesis protein SpsA
domain: Spore coat polysaccharide biosynthesis protein SpsA
species: Bacillus subtilis [TaxId: 1423]

Probab=81.20  E-value=6.4  Score=31.11  Aligned_cols=107  Identities=11%  Similarity=0.139  Sum_probs=60.6

Q ss_pred             CeEEEEEEeCCCCChHHHHHHhhhhc---CCCceEEEEEeCCCCCccccccCCcceeccccCCceeeec----------C
Q 023235           60 AKIAFLFLARRELPLDFLWGSFFEIA---DVENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAW----------G  126 (285)
Q Consensus        60 ~KiAfLiLah~~~~~~~l~~rl~~~l---d~~~~~IyIHvD~k~~~~~~~~~~~vf~~r~I~~rv~V~W----------G  126 (285)
                      |||..+|-+++....   +++.++++   ..+.+.|+|.-|.+.+-....- ....    -..++++..          .
T Consensus         1 P~vSiiip~yN~~~~---l~~~l~Si~~Qt~~~~eiivvdd~S~d~t~~~l-~~~~----~~~~i~~~~~~~~~~~~~~~   72 (255)
T d1qg8a_           1 PKVSVIMTSYNKSDY---VAKSISSILSQTFSDFELFIMDDNSNEETLNVI-RPFL----NDNRVRFYQSDISGVKERTE   72 (255)
T ss_dssp             CCEEEEEEESSCTTT---HHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHH-GGGG----GSTTEEEEECCCCSHHHHHS
T ss_pred             CEEEEEEecCCCHHH---HHHHHHHHHhCCCCCeEEEEEECCCCccHHHHH-HHhh----hhcccccccccccccccccc
Confidence            689999999988875   55555553   2367899999887653110000 0000    011222221          2


Q ss_pred             cccHHHHHHHHHHHHhcCCCCCEEEEecCCCccCCC-hHHHHHHHhcCC-CCce
Q 023235          127 ESSMIAAERLLLEAALEDPANQRFVLLSDSCVPIYN-FSYVYKYLMASP-RSFV  178 (285)
Q Consensus       127 g~SlV~Atl~LL~~AL~d~~~~yf~LLSGsD~PL~s-~~~I~~fL~~~~-~sFI  178 (285)
                      ..+.-.|--.+++.|    +.+|++++-+.|++..+ .+.+.+++..++ ..++
T Consensus        73 ~~g~~~a~N~gi~~a----~g~~i~~lD~Dd~~~p~~l~~~~~~~~~~~~~~~v  122 (255)
T d1qg8a_          73 KTRYAALINQAIEMA----EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVI  122 (255)
T ss_dssp             SCHHHHHHHHHHHHC----CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEE
T ss_pred             cchhccccccccccc----ccccccccccccccccchHHHHHHHHHhCCCCCeE
Confidence            233333433444544    56899999999999755 345556666554 4555