Citrus Sinensis ID: 023258

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-----
Protein Sequence
MSKTMSSTSTESSDGDQATVELIVCNSSPSAADGGGTASDEISPLLAQSEKPKTNIFSVSYTRRKPREHVIETDTSLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPL
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccccHcccccccccccccEEEEEEEccccccccccccccccccHHccccccccEEEEEccccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
msktmsststessdgdqaTVELIVcnsspsaadgggtasdeispllaqsekpktnifsvsytrrkprehvietdtSLTNCMLWVwngsrysgLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRrsgqpifgpmHARNLLVLRALVGFLSLFSFVYSIqrlplsqatvlsfTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQavsgglvkpgeaislnvrgSDHMLAVLVGLFSSITGGISYCLIKaganasdqpl
Flexible Loop (DISEMBL)
msktmsststessdgdqATVELIVCNSSPSAADGGGTASDEISpllaqsekpktnifsvsytrrkprehvietdtsltncMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQavsgglvkpGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPL
Low Complexity Region (SEG)
msktmsststessDGDQATVELIVCNSSPSAADGGGTASDEISPLLAQSEKPKTNIFSVSYTRRKPREHVIETDTSLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPL
Disordered region (IsUnstruct)
********************************************************FSVSYT*****EHVIETDTSLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKA*********
Disordered Region (DISOPRED)
*********************************************************************************LWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAG*N******
Disordered Region (DISEMBL)
****************QATVELIVCNSSP*********SDEISPLLAQSEKPKTNIFSVSYTRRKPREHVIETDTSLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPL
Disordered Region (DISPRO)
**************GDQATVELIVCNS**************ISPLLAQSEKPKTNIFSVSYTRRKPREHVI*TDTSLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQ******************GSDHMLAVLVGLFSSITGGISYCLIKAGAN******
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSKTMSSTSTESSDGDQATVELIVCNSSPSAADGGGTASDEISPLLAQSEKPKTNIFSVSYTRRKPREHVIETDTSLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	285	2.2.26 [Sep-21-2011]
Q04835	414	Uncharacterized membrane	yes	no	0.564	0.388	0.283	4e-08
Q2M3R5	365	Solute carrier family 35	yes	no	0.403	0.315	0.322	6e-07
Q8BY79	368	Solute carrier family 35	yes	no	0.498	0.385	0.278	9e-06
Q08980	353	Probable transport protei	no	no	0.564	0.456	0.224	1e-05

>sp|Q04835|YM87_YEAST Uncharacterized membrane protein YMR253C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR253C PE=1 SV=1

 Score = 58.9 bits (141), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 12/173 (6%)

Query: 110 SDVFMVQSIPLFETVFMRCTVTLI--LSYLWLRRS--GQPIFGPMHARNLLVLRALVGFL 165
            D+   + I   + + +R  +T I  L Y+++ +S      FG    R  LVLR   GF 
Sbjct: 96  DDIANDRQIKPLQILLVRMVITYIGTLIYMYINKSTISDVPFGKPEVRKWLVLRGCTGFF 155

Query: 166 SLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR 225
            +F   YS+  L +S A +++F AP +    + +ILRE+    E  G  +S  GV+ I R
Sbjct: 156 GVFGMYYSLMYLTISDAVLITFLAPSLTIFLSWVILRERFTKVEALGSLISLLGVVLIVR 215

Query: 226 RILTTQAVSGGLVKPGEAISLNVRGSD---HMLAVLVGLFSSITGGISYCLIK 275
                 +   G  +  ++ S  V  SD    ++A LVGL+  +     Y +I+
Sbjct: 216 -----PSFLFGTPELTDSSSQIVESSDPKSRLIATLVGLWGVLGMSCVYIIIR 263

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q2M3R5|S35G1_HUMAN Solute carrier family 35 member G1 OS=Homo sapiens GN=SLC35G1 PE=2 SV=1

 Score = 55.1 bits (131), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 6/121 (4%)

Query: 105 FMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGF 164
           F++ + DV  V+ I  F  VF    V   L Y   R++G    GP   R  L+LR ++G 
Sbjct: 88  FVKKVQDVHAVE-ISAFRCVFQMLVVIPCLIY---RKTG--FIGPKGQRIFLILRGVLGS 141

Query: 165 LSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF 224
            ++    Y+ Q + L+ ATV++F++P+  SI A I L+EK    +      +  GV+ I 
Sbjct: 142 TAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKEKYSPWDALFTVFTITGVILIV 201

Query: 225 R 225
           R
Sbjct: 202 R 202

Homo sapiens (taxid: 9606)

>sp|Q8BY79|S35G1_MOUSE Solute carrier family 35 member G1 OS=Mus musculus GN=Slc35g1 PE=2 SV=1

 Score = 51.2 bits (121), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 9/151 (5%)

Query: 105 FMQVISDVFM--VQSIPLFETVFMRCTVTL--ILSYLWLRRSGQPIFGPMHARNLLVLRA 160
           F+  ++ +F+  VQ +   E    RC V +  I+  L  R++G    GP   R  L LR 
Sbjct: 83  FLFSVASLFVKKVQGVHAVEISAFRCVVQMLVIIPCLIYRKTG--FIGPKGQRLFLFLRG 140

Query: 161 LVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGV 220
           + G  ++    Y+ Q   L+ ATV++F+ P+  SI A I L+EK  + +      +  GV
Sbjct: 141 VFGSSAMILMYYAFQTTSLADATVIAFSCPVFTSIFAWIFLKEKYSLWDAFFTLFAIAGV 200

Query: 221 LFIFRRILTTQAVSGGLVKPGEAISLNVRGS 251
           + I R      + + G+    E+ S +++G+
Sbjct: 201 ILIVRPPFIFGSDTSGM---RESYSEHIKGT 228

Mus musculus (taxid: 10090)

>sp|Q08980|YP264_YEAST Probable transport protein YPL264C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPL264C PE=1 SV=1

 Score = 50.8 bits (120), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 4/165 (2%)

Query: 122 ETVFMRCTVTLILSYLWLRRSGQPI----FGPMHARNLLVLRALVGFLSLFSFVYSIQRL 177
           + + +R ++T   + +++  + Q +    +GP   R  L+LR ++GF  +F   +S+  L
Sbjct: 53  QILLVRMSITYCCTLVYMHWNKQSVPDIPWGPAPCRKWLILRGIMGFFGVFGMYFSLMYL 112

Query: 178 PLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGL 237
            +S A +++F +P +    + ++L E     E  G  +SF GV+ I R        + G 
Sbjct: 113 SISDAVLITFMSPTLTIFLSFLLLGEPFSKLEALGSLISFSGVVLIIRPTFLFGEQTQGQ 172

Query: 238 VKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASD 282
             P + I         ++A+ V L         Y +I+   N + 
Sbjct: 173 QSPQDDIVETQNPKLRLIAIGVSLLGVCGLSSVYIIIRYIGNKAH 217

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	285
225447127	390	PREDICTED: uncharacterized protein LOC10	0.961	0.702	0.691	1e-100
224129018	393	predicted protein [Populus trichocarpa]	0.940	0.681	0.646	5e-96
147835022	413	hypothetical protein VITISV_004002 [Viti	0.961	0.663	0.639	5e-96
255568715	425	Transmembrane protein, putative [Ricinus	0.933	0.625	0.628	4e-92
21554090	401	unknown [Arabidopsis thaliana]	0.961	0.683	0.620	1e-90
18396156	401	nodulin MtN21 /EamA-like transporter pro	0.961	0.683	0.610	2e-90
297831648	401	integral membrane family protein [Arabid	0.961	0.683	0.603	3e-89
449444715	392	PREDICTED: uncharacterized protein LOC10	0.968	0.704	0.544	1e-78
148910334	387	unknown [Picea sitchensis]	0.919	0.677	0.407	2e-50
357462229	475	Membrane protein, putative [Medicago tru	0.603	0.362	0.518	6e-43

>gi|225447127|ref|XP_002271163.1| PREDICTED: uncharacterized protein LOC100256852 [Vitis vinifera] gi|297739206|emb|CBI28857.3| unnamed protein product [Vitis vinifera]

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 193/279 (69%), Positives = 216/279 (77%), Gaps = 5/279 (1%)

Query: 9   STESSDGDQATVELIVCNSSPSAADGGGTASDEISPLLAQSEKPKTNIFSVSYTRRKPRE 68
           S E+ D D   VELIVC++S S +      S+EI PLLA SEKPK NIFSVSY+RRKPRE
Sbjct: 3   SVETIDSDAPAVELIVCDASSSDSAANSVGSEEIEPLLAVSEKPKINIFSVSYSRRKPRE 62

Query: 69  HVIET--DTSLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFM 126
            V ++  D S T  +LW W+GSR SGL+CMALSSTIY  M+ +SD+F  QSIPLFET F 
Sbjct: 63  QVTKSAEDASFTQFILWAWSGSRCSGLLCMALSSTIYCIMEALSDIFSAQSIPLFETAFT 122

Query: 127 RCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLS 186
           RCTVTLILSY WLRRSGQPIFGP H R+LLV RAL+G+LSL SFVY IQRLPLSQA VLS
Sbjct: 123 RCTVTLILSYFWLRRSGQPIFGPTHVRSLLVSRALMGYLSLLSFVYCIQRLPLSQAVVLS 182

Query: 187 FTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISL 246
           FT PIMASI ARIIL EKL IAEIGGLA SF GVLFIFR IL  Q   GGL K  EA ++
Sbjct: 183 FTTPIMASIMARIILHEKLNIAEIGGLACSFIGVLFIFRPILAAQ---GGLPKAEEANNI 239

Query: 247 NVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPL 285
            V GSDH+ AVLVGL SSI+GGISYCL +AGA ASDQP+
Sbjct: 240 YVGGSDHIYAVLVGLVSSISGGISYCLTRAGAKASDQPV 278

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129018|ref|XP_002320480.1| predicted protein [Populus trichocarpa] gi|222861253|gb|EEE98795.1| predicted protein [Populus trichocarpa]

 Score =  357 bits (915), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 185/286 (64%), Positives = 218/286 (76%), Gaps = 18/286 (6%)

Query: 11  ESSDGDQATVELIVCNSSPS-------AADGGGTASDEISPLLAQSEKPKTNIFSVSYTR 63
           E S+GD   VELIVC++S S       + DG   AS+EI+PLL    KPK NIFSVS++R
Sbjct: 3   EISNGDHDAVELIVCDASASELVPDEISGDGAVLASEEITPLL----KPKINIFSVSHSR 58

Query: 64  RKPREH---VIETDT-SLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIP 119
           RKPRE    + + +T  +T  +LW+W GSRYSGL+C+A+SSTIYF M+V+SD F  QSIP
Sbjct: 59  RKPREQGTKIPDIETFPVTQFVLWIWGGSRYSGLLCVAISSTIYFVMEVLSDFFSAQSIP 118

Query: 120 LFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPL 179
           LFET F RCT+TLILSYLWLR +GQPIFGP HAR  L  RAL G LSL SF+Y I+RLPL
Sbjct: 119 LFETAFARCTITLILSYLWLRGNGQPIFGPAHARKFLFSRALTGCLSLLSFIYCIRRLPL 178

Query: 180 SQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVK 239
           SQA VLSFT PIMASI ARIIL EKLKI ++GGLA SFFGVLFIFR+ILTTQ   G L++
Sbjct: 179 SQAIVLSFTTPIMASIVARIILHEKLKIVDVGGLACSFFGVLFIFRQILTTQ---GALLR 235

Query: 240 PGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPL 285
            GE   + + G +H+L VLV LFSSITGGISYCL+KAGA ASDQPL
Sbjct: 236 VGETNYIAIMGRNHVLTVLVALFSSITGGISYCLVKAGAKASDQPL 281

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147835022|emb|CAN70194.1| hypothetical protein VITISV_004002 [Vitis vinifera]

 Score =  356 bits (914), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 193/302 (63%), Positives = 216/302 (71%), Gaps = 28/302 (9%)

Query: 9   STESSDGDQATVELIVCNSSPSAADGGGTASDEISPLLAQSEKPKTNIFSVSYTRRKPRE 68
           S E+ D D   VELIVC++S S +      S+EI PLLA SEKPK NIFSVSY+RRKPRE
Sbjct: 3   SXETIDSDAPAVELIVCDASSSDSAANSVGSEEIEPLLAVSEKPKINIFSVSYSRRKPRE 62

Query: 69  HVIET--DTSLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFM 126
            V ++  D S T  +LW W+GSR SGL+CMALSSTIY  M+ +SD+F  QSIPLFET F 
Sbjct: 63  QVTKSAEDASFTQFILWAWSGSRCSGLLCMALSSTIYCIMEALSDIFSAQSIPLFETAFT 122

Query: 127 RCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLS 186
           RCTVTLILSY WLRRSGQPIFGP H R+LLV RAL+G+LSL SFVY IQRLPLSQA VLS
Sbjct: 123 RCTVTLILSYFWLRRSGQPIFGPTHVRSLLVSRALMGYLSLLSFVYCIQRLPLSQAVVLS 182

Query: 187 FTAPIMASIAARIILREKLKIAEIG-----------------------GLALSFFGVLFI 223
           FT PIMASI ARIIL EKL IAEIG                       GLA SF GVLFI
Sbjct: 183 FTTPIMASIMARIILHEKLNIAEIGELYTYFCEAGGETDCFVBCIYFPGLACSFIGVLFI 242

Query: 224 FRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQ 283
           FR IL  Q   GGL K  EA ++ V GSDH+ AVLVGL SSI+GGISYCL +AGA ASDQ
Sbjct: 243 FRPILAAQ---GGLPKAEEANNIYVGGSDHIYAVLVGLVSSISGGISYCLTRAGAKASDQ 299

Query: 284 PL 285
           P+
Sbjct: 300 PV 301

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568715|ref|XP_002525329.1| Transmembrane protein, putative [Ricinus communis] gi|223535388|gb|EEF37062.1| Transmembrane protein, putative [Ricinus communis]

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 186/296 (62%), Positives = 217/296 (73%), Gaps = 30/296 (10%)

Query: 7   STSTESSDGDQATVELIVCNSS----------PSAADGG---GTASDEISPLLAQSEKPK 53
           + S E  DGD A VELIVCNSS           S AD G   G+ SDEI+PLL    KPK
Sbjct: 2   AASAEIIDGDHA-VELIVCNSSSSSSSSSSSPDSFADNGNPTGSPSDEITPLL----KPK 56

Query: 54  TNIFSVSYTRRKPREHVI---ETDTS-LTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVI 109
            NIFSVS++RRKPRE V    ET+T      +LWVW+GSRYSG++CMALSS+IYF M+++
Sbjct: 57  INIFSVSHSRRKPREQVAKLPETETPPFIQLILWVWSGSRYSGILCMALSSSIYFVMEIL 116

Query: 110 SDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFS 169
           S  F  +SIPLFET FMRCT+ LILSY+WLRRSGQPIFG +HAR LL LRAL GFLSL S
Sbjct: 117 SHSFSTRSIPLFETAFMRCTIVLILSYIWLRRSGQPIFGAVHARKLLFLRALTGFLSLLS 176

Query: 170 FVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILT 229
           F+Y IQRLP SQA +L+FT PI+ASI AR++L EKLKIA+IGGL  SFFGVLFI+R+IL 
Sbjct: 177 FIYCIQRLPFSQAIILNFTTPIVASILARLMLHEKLKIADIGGLTCSFFGVLFIYRQILR 236

Query: 230 TQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPL 285
           TQA        GEA + +  GS H+ AVL GL S ITGGISYC IKAGA ASDQP+
Sbjct: 237 TQA--------GEANNTSASGSHHVYAVLAGLLSLITGGISYCFIKAGAKASDQPV 284

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21554090|gb|AAM63171.1| unknown [Arabidopsis thaliana]

 Score =  338 bits (868), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 180/290 (62%), Positives = 218/290 (75%), Gaps = 16/290 (5%)

Query: 5   MSSTSTESSDGDQA-TVELIVCN-SSP---SAADGGGTASDEISPLLAQSEKPKTNIFSV 59
           M+S+S E+   D+  ++EL V +  SP   SA+     +SDEI PLL Q+++P+ NIFS 
Sbjct: 1   MASSSPETRIADEHLSLELTVRDLESPALESASSAPELSSDEIIPLLNQNQRPRINIFSA 60

Query: 60  SYTRRKPREHVI---ETDTS-LTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMV 115
           SYTRRKPRE VI   ET+ S LT    W+W+GSRYSGL+CMALSST+Y  M+++SD F V
Sbjct: 61  SYTRRKPREQVIKVTETEISPLTQFSSWIWSGSRYSGLLCMALSSTLYLIMELVSDTFSV 120

Query: 116 QSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQ 175
           Q IPLFET FMRCT+ LILSYLWL+R GQPIFGP HAR LLV RALVG+LSLFSF++SIQ
Sbjct: 121 QPIPLFETAFMRCTIILILSYLWLKRIGQPIFGPAHARKLLVSRALVGYLSLFSFIFSIQ 180

Query: 176 RLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSG 235
            LPLSQA VLSF  PIMASIAAR+++ EKLKI +IGGLA SFFGVLFIF   LT Q    
Sbjct: 181 MLPLSQAIVLSFLNPIMASIAARVVMHEKLKITDIGGLACSFFGVLFIFGPTLTVQV--- 237

Query: 236 GLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPL 285
           GL    E    N++ + H+ A L+GLFSSITGGI+YCLIKA A AS+QP+
Sbjct: 238 GLEGKNE----NLKENHHIYAFLLGLFSSITGGITYCLIKAAAKASEQPV 283

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18396156|ref|NP_565328.1| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana] gi|20198220|gb|AAM15467.1| Expressed protein [Arabidopsis thaliana] gi|109134115|gb|ABG25056.1| At2g05755 [Arabidopsis thaliana] gi|110738794|dbj|BAF01320.1| hypothetical protein [Arabidopsis thaliana] gi|330250873|gb|AEC05967.1| nodulin MtN21 /EamA-like transporter protein [Arabidopsis thaliana]

 Score =  338 bits (867), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 177/290 (61%), Positives = 217/290 (74%), Gaps = 16/290 (5%)

Query: 5   MSSTSTESSDGDQA-TVELIVCNSSPSAADGGGTA----SDEISPLLAQSEKPKTNIFSV 59
           M+S+S E+   D+  ++EL V +   +A +   +A    SDEI PLL Q+++P+ NIFS 
Sbjct: 1   MASSSPETRIADEHLSLELTVRDLESTALESASSAPELSSDEIIPLLNQNQRPRINIFSA 60

Query: 60  SYTRRKPREHVI---ETDTS-LTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMV 115
           SYTRRKP E VI   ET+ S +T    W+W+GSRYSGL+CMALSST+Y  M+++SD F V
Sbjct: 61  SYTRRKPSEQVIKVTETEISPVTQFSSWIWSGSRYSGLLCMALSSTLYLIMELVSDTFSV 120

Query: 116 QSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQ 175
           Q IPLFET FMRCT+ LILSYLWL+R GQPIFGP HAR LLV RALVG+LSLFSF++SIQ
Sbjct: 121 QPIPLFETAFMRCTIILILSYLWLKRIGQPIFGPAHARKLLVSRALVGYLSLFSFIFSIQ 180

Query: 176 RLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSG 235
            LPLSQA VLSF  PIMASIAAR+++ EKLKI +IGGLA SFFGVLFIF   LT Q    
Sbjct: 181 MLPLSQAIVLSFLNPIMASIAARVVMHEKLKITDIGGLACSFFGVLFIFGPTLTVQV--- 237

Query: 236 GLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPL 285
           GL    E    N++G+ H+ A L+GLFSSITGGI+YCLIKA A AS+QP+
Sbjct: 238 GLEGKNE----NLKGNHHIYAFLLGLFSSITGGITYCLIKAAAKASEQPV 283

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297831648|ref|XP_002883706.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata] gi|297329546|gb|EFH59965.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  333 bits (855), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 175/290 (60%), Positives = 215/290 (74%), Gaps = 16/290 (5%)

Query: 5   MSSTSTESSDGDQA-TVELIVCN-SSPSAADGGG---TASDEISPLLAQSEKPKTNIFSV 59
           M+S+S E+   D+   +EL V +  SP+  D      ++SDEI PLL Q+++P+ NIFS 
Sbjct: 1   MASSSPETRITDEHLALELTVRDLESPALEDASSAPESSSDEIIPLLNQNQRPRINIFSA 60

Query: 60  SYTRRKPREHVI---ETDTS-LTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMV 115
           SYTR KPRE VI   ET+ S +T    W+W+GSRYSGL+CM LSST+Y  M+++SD F V
Sbjct: 61  SYTRHKPREQVIKVTETEISPVTQFSSWIWSGSRYSGLLCMVLSSTLYLIMELVSDTFSV 120

Query: 116 QSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQ 175
           Q IPLFET FMRCT+ LILSYLWL+R GQPIFGP HAR LLV RALVG+LSLFSF++SIQ
Sbjct: 121 QPIPLFETAFMRCTIILILSYLWLKRIGQPIFGPAHARKLLVSRALVGYLSLFSFIFSIQ 180

Query: 176 RLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSG 235
            LPLSQA VLSF  PIMASIAAR+++ EKLKI +IGGLA SFFGVLFIF   LT Q  S 
Sbjct: 181 MLPLSQAIVLSFLNPIMASIAARVVMHEKLKITDIGGLACSFFGVLFIFGPTLTVQVGS- 239

Query: 236 GLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPL 285
                 E  + N++G+ H+ A  +GLFSSITGGI+YCLIKA A AS+QP+
Sbjct: 240 ------EGTNENLKGNHHIYAFWLGLFSSITGGITYCLIKAAAKASEQPV 283

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444715|ref|XP_004140119.1| PREDICTED: uncharacterized protein LOC101208388 [Cucumis sativus] gi|449481153|ref|XP_004156097.1| PREDICTED: uncharacterized protein LOC101226055 [Cucumis sativus]

 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 153/281 (54%), Positives = 190/281 (67%), Gaps = 5/281 (1%)

Query: 9   STESSDGDQATVELIVCNSSPSAADGGGTASDEISPLLAQSEKPKTNIFSVSYTRRKPRE 68
            ++ + G    VELIV    PS AD     S+EI+PLL Q EKPK NIF++SY RR P E
Sbjct: 2   DSDMNSGVDHLVELIVREEPPSIADDV-PISEEIAPLLTQIEKPKINIFTISYPRRTPME 60

Query: 69  HVIETD----TSLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETV 124
            V +      +SL+  ++W+W+GSRYSGL+C +LSS  YF M+V+  VF  QSIP+ E  
Sbjct: 61  QVNKVHDSDVSSLSQSIIWIWSGSRYSGLLCASLSSIFYFAMEVLMGVFSAQSIPIIEMA 120

Query: 125 FMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATV 184
           F RC +  ILSYLWLRRS QPIFG  H R LLV RAL G LS+ SF+YSI+RL +SQA V
Sbjct: 121 FTRCVIITILSYLWLRRSEQPIFGQPHVRKLLVSRALTGLLSMMSFIYSIRRLHISQAIV 180

Query: 185 LSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAI 244
           LSFT PI+AS+AAR IL EK K ++ GGLA SF GVL IF+ + T+Q    GL K G+  
Sbjct: 181 LSFTTPILASVAARFILNEKFKFSDFGGLACSFLGVLLIFQDLFTSQGTEAGLTKAGKGS 240

Query: 245 SLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQPL 285
           +    GS H  AVLVG  +SI G +SYCLI+A A ASDQP+
Sbjct: 241 TTPSLGSHHAYAVLVGFVASIAGAVSYCLIRASAKASDQPV 281

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148910334|gb|ABR18246.1| unknown [Picea sitchensis]

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 112/275 (40%), Positives = 171/275 (62%), Gaps = 13/275 (4%)

Query: 16  DQATVELIVCNSSPSAADGGGTASDEISPLLAQSEKPKTNIFSVSY--TRRKPREHV-IE 72
           D+    L+V + S  A       +D ++P     +  K +IFSVS+   R K R +  +E
Sbjct: 8   DEEIRPLMVSSPSTVANSIVEVTTDTLAP-----QCLKMSIFSVSHGTARSKERRNKPME 62

Query: 73  TD-TSLTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVT 131
            D T+L+  ++W W GSRYSG++CMALSS +Y  M +  ++F   S P +ET+F+RC V 
Sbjct: 63  ADFTALSEFLIWAWGGSRYSGMVCMALSSLMYSIMGLFVELFAATSAPSYETIFIRCAVI 122

Query: 132 LILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPI 191
           L+ +++WLR++GQP+FG  H   LL+ RA+ G+LSL  F YSIQ LPL  A VL+FT P 
Sbjct: 123 LVAAFIWLRKTGQPLFGLPHVWRLLMARAITGYLSLLGFFYSIQVLPLHDAIVLNFTTPF 182

Query: 192 MASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGS 251
           MA+I A  IL+EKL + E+GG+  +F G+  +++ I   Q   G   +   +  L++ G 
Sbjct: 183 MAAILASFILQEKLGVIELGGIFCNFLGIFLVYQPIPFLQ---GQRPESNGSTGLDIPGR 239

Query: 252 DHML-AVLVGLFSSITGGISYCLIKAGANASDQPL 285
            + + ++L+ L S++TGG +YC I+A A AS+QPL
Sbjct: 240 QYYIHSILIALLSAVTGGANYCFIRAAAKASEQPL 274

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357462229|ref|XP_003601396.1| Membrane protein, putative [Medicago truncatula] gi|355490444|gb|AES71647.1| Membrane protein, putative [Medicago truncatula]

 Score =  180 bits (457), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 98/189 (51%), Positives = 132/189 (69%), Gaps = 17/189 (8%)

Query: 9   STESSDGDQATVELIVCN---------SSPSAADGGGTASDEISPLLAQSEKPKTNIFSV 59
           ++  S+G    VELIV +         SS S+ D    A D+I+PLL+ +++PK NIF+ 
Sbjct: 2   ASPESNGSDHVVELIVRDIPQPPPLPSSSSSSDDSRDNAHDQIAPLLSHTDRPKINIFTA 61

Query: 60  SYTRRK-PREHV---IETDTS-LTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFM 114
           SY RRK PR+ V   +E++TS  T C+LW+WNGSRYSGL+CMALSS +YF M V+S++F 
Sbjct: 62  SYPRRKQPRDEVTRLLESETSPFTQCILWIWNGSRYSGLLCMALSSFLYFLMGVLSNIFS 121

Query: 115 VQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVY-- 172
           VQ+IPLFET F RCT+ LILSYLWLRRS QP+FG  + R +L+LRAL G +S+ SFV   
Sbjct: 122 VQAIPLFETAFTRCTIILILSYLWLRRSEQPLFGTSNVRIILLLRALAGCISMSSFVRWV 181

Query: 173 -SIQRLPLS 180
             ++R P+ 
Sbjct: 182 GHVERRPVD 190

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	285
TAIR|locus:505006238	401	AT2G05755 [Arabidopsis thalian	0.919	0.653	0.626	1.3e-82
DICTYBASE|DDB_G0282673	510	DDB_G0282673 "Uncharacterized	0.649	0.362	0.278	5.8e-11
CGD|CAL0006171	460	orf19.2204 [Candida albicans (	0.550	0.341	0.329	8.6e-11
UNIPROTKB|Q5A2K2	460	CaO19.2204 "Putative uncharact	0.550	0.341	0.329	8.6e-11
UNIPROTKB|Q47WD7	291	CPS_4235 "Membrane protein" [C	0.371	0.364	0.324	1.8e-10
TIGR_CMR|CPS_4235	291	CPS_4235 "membrane protein" [C	0.371	0.364	0.324	1.8e-10
DICTYBASE|DDB_G0292606	698	tmem20 "EamA-like transporter	0.638	0.260	0.276	9.4e-10
UNIPROTKB|G4NII1	438	MGG_09833 "Uncharacterized pro	0.382	0.248	0.360	1.3e-09
SGD|S000004866	414	YMR253C "Putative protein of u	0.557	0.384	0.289	4.5e-09
UNIPROTKB|I3LCX7	366	SLC35G1 "Uncharacterized prote	0.449	0.349	0.297	1.2e-08

TAIR|locus:505006238 AT2G05755 [Arabidopsis thaliana (taxid:3702)]

 Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
 Identities = 171/273 (62%), Positives = 206/273 (75%)

Query:    17 QATVELIVCNSSPSAADGGGTASDEISPLLAQSEKPKTNIFSVSYTRRKPREHVI---ET 73
             + TV  +   +  SA+     +SDEI PLL Q+++P+ NIFS SYTRRKP E VI   ET
Sbjct:    18 ELTVRDLESTALESASSAPELSSDEIIPLLNQNQRPRINIFSASYTRRKPSEQVIKVTET 77

Query:    74 DTS-LTNCMLWVWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTL 132
             + S +T    W+W+GSRYSGL+CMALSST+Y  M+++SD F VQ IPLFET FMRCT+ L
Sbjct:    78 EISPVTQFSSWIWSGSRYSGLLCMALSSTLYLIMELVSDTFSVQPIPLFETAFMRCTIIL 137

Query:   133 ILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIM 192
             ILSYLWL+R GQPIFGP HAR LLV RALVG+LSLFSF++SIQ LPLSQA VLSF  PIM
Sbjct:   138 ILSYLWLKRIGQPIFGPAHARKLLVSRALVGYLSLFSFIFSIQMLPLSQAIVLSFLNPIM 197

Query:   193 ASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSD 252
             ASIAAR+++ EKLKI +IGGLA SFFGVLFIF   LT Q    GL    E    N++G+ 
Sbjct:   198 ASIAARVVMHEKLKITDIGGLACSFFGVLFIFGPTLTVQV---GLEGKNE----NLKGNH 250

Query:   253 HMLAVLVGLFSSITGGISYCLIKAGANASDQPL 285
             H+ A L+GLFSSITGGI+YCLIKA A AS+QP+
Sbjct:   251 HIYAFLLGLFSSITGGITYCLIKAAAKASEQPV 283

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0046520 "sphingoid biosynthetic process" evidence=RCA

DICTYBASE|DDB_G0282673 DDB_G0282673 "Uncharacterized membrane protein YMR253C" [Dictyostelium discoideum (taxid:44689)]

 Score = 175 (66.7 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 56/201 (27%), Positives = 96/201 (47%)

Query:    84 VWNGSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMR---CTVTLILSYLWLR 140
             +W  S++ G++ + LS+ ++  M  ++   + + +   E  F R   C +  +L    L+
Sbjct:   211 IW--SKFQGIILLVLSTGLFSVM-ALAVKQLSKELSSLEIAFFRSFYCFIGCLLILFPLK 267

Query:   141 RSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARII 200
              +  P+ GP   R  L LR L G + L ++ YSI  LPLS+A ++SFT+P+M +  A ++
Sbjct:   268 IN--PL-GPKEKRLFLSLRGLSGTIGLCAYFYSITVLPLSEAVIISFTSPVMTAALAAVL 324

Query:   201 LREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDH-MLAVLV 259
             L+EK    +     LS  G+  I +               G   S +  G  H +L +  
Sbjct:   325 LKEKWGPVQAICAFLSLCGITVISKPSFLFHDDHND----GSTAS-HAEGDPHKLLYIFT 379

Query:   260 GLFSSITGGISYCLI-KAGAN 279
             G+  +  G ISY  + K G N
Sbjct:   380 GIIGAFFGAISYIAVRKVGPN 400

GO:0016020 "membrane" evidence=IEA

CGD|CAL0006171 orf19.2204 [Candida albicans (taxid:5476)]

 Score = 173 (66.0 bits), Expect = 8.6e-11, P = 8.6e-11
 Identities = 54/164 (32%), Positives = 78/164 (47%)

Query:   122 ETVFMRCTVTLI--LSYLWLRRSGQPI-FGPMHARNLLVLRALVGFLSLFSFVYSIQRLP 178
             + +F+R  +T I  L Y+ + RS     FGP   R LL+LR LVGF  +F   +S+Q L 
Sbjct:   140 QILFVRMFITYICCLLYMAITRSVPDAPFGPKPIRKLLLLRGLVGFFGVFGMYFSLQYLS 199

Query:   179 LSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLV 238
             LS A  L+F  P++ +  A ++L EK  I E      S  GV+ I +        S    
Sbjct:   200 LSDAVALTFLVPMVTAFLAFVLLHEKYSILEAICSVFSLAGVVLIAKPTFIFGNESNKET 259

Query:   239 KPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLI--KAGANA 280
                E I  +      +LA +VGL   + G  S  ++  K G NA
Sbjct:   260 GNDETIESS-SSEKRILATIVGLIG-VCGASSVYIVLRKIGMNA 301

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5A2K2 CaO19.2204 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 173 (66.0 bits), Expect = 8.6e-11, P = 8.6e-11
 Identities = 54/164 (32%), Positives = 78/164 (47%)

Query:   122 ETVFMRCTVTLI--LSYLWLRRSGQPI-FGPMHARNLLVLRALVGFLSLFSFVYSIQRLP 178
             + +F+R  +T I  L Y+ + RS     FGP   R LL+LR LVGF  +F   +S+Q L 
Sbjct:   140 QILFVRMFITYICCLLYMAITRSVPDAPFGPKPIRKLLLLRGLVGFFGVFGMYFSLQYLS 199

Query:   179 LSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLV 238
             LS A  L+F  P++ +  A ++L EK  I E      S  GV+ I +        S    
Sbjct:   200 LSDAVALTFLVPMVTAFLAFVLLHEKYSILEAICSVFSLAGVVLIAKPTFIFGNESNKET 259

Query:   239 KPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLI--KAGANA 280
                E I  +      +LA +VGL   + G  S  ++  K G NA
Sbjct:   260 GNDETIESS-SSEKRILATIVGLIG-VCGASSVYIVLRKIGMNA 301

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q47WD7 CPS_4235 "Membrane protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 157 (60.3 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
 Identities = 35/108 (32%), Positives = 61/108 (56%)

Query:   118 IPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRL 177
             IP+ E V  R  V+ I+SY  ++R    ++G  H + LL+ R  VG  +L    Y++  L
Sbjct:    38 IPVLEIVAARAIVSGIISYADIKRKKISLWG--HNKALLIARGTVGSFALMFVYYAVTTL 95

Query:   178 PLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR 225
             PL++ATVL +  P+  ++ A   L+E ++ + I  +A+S  G+  I +
Sbjct:    96 PLAEATVLQYLHPVFTAVLAVFFLKETIQRSTIACIAISLLGLFIIIQ 143

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CPS_4235 CPS_4235 "membrane protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 157 (60.3 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
 Identities = 35/108 (32%), Positives = 61/108 (56%)

Query:   118 IPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRL 177
             IP+ E V  R  V+ I+SY  ++R    ++G  H + LL+ R  VG  +L    Y++  L
Sbjct:    38 IPVLEIVAARAIVSGIISYADIKRKKISLWG--HNKALLIARGTVGSFALMFVYYAVTTL 95

Query:   178 PLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR 225
             PL++ATVL +  P+  ++ A   L+E ++ + I  +A+S  G+  I +
Sbjct:    96 PLAEATVLQYLHPVFTAVLAVFFLKETIQRSTIACIAISLLGLFIIIQ 143

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

DICTYBASE|DDB_G0292606 tmem20 "EamA-like transporter Tmem20" [Dictyostelium discoideum (taxid:44689)]

 Score = 167 (63.8 bits), Expect = 9.4e-10, P = 9.4e-10
 Identities = 53/192 (27%), Positives = 92/192 (47%)

Query:    92 GLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMH 151
             GL+ +  ++ ++ FM  +  +   +   L E  FMR    LI   + L    +   GP +
Sbjct:   406 GLILLVFAAFLFSFMAYLVKLISKEFDSL-EIAFMRSFYGLIGCIIILFSLRENPLGPKN 464

Query:   152 ARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIG 211
              R  L  R L G +SL ++ Y++  LPLS+A ++SFT+P++ +  A ++L+EK    E  
Sbjct:   465 VRWFLAARGLSGAISLCAYFYTLTVLPLSEAVIISFTSPVITAALAAVVLKEKWGGIEAI 524

Query:   212 GLALSFFGVLFIFR-RILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGIS 270
                LS  GV+ + +   L      G   + GE        S  +L VL+G+  +    +S
Sbjct:   525 CAFLSLCGVVVVSKPSFLFHHHTDGSTTENGE-------DSGKLLYVLIGVGGAFFTAVS 577

Query:   271 YCLI-KAGANAS 281
             Y  + K G + +
Sbjct:   578 YIAVRKVGPSVN 589

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|G4NII1 MGG_09833 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 163 (62.4 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 40/111 (36%), Positives = 53/111 (47%)

Query:   117 SIPLFETVFMRCTVTLILS--YLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSI 174
             S      +F+R   T IL   Y+W +      FG    R LL+LR   GF  L    YS+
Sbjct:   102 SFHALHVIFVRMLATAILGLLYMWWKSVPDAPFGDRRVRGLLLLRGASGFSGLLGLYYSL 161

Query:   175 QRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR 225
               LPLS AT +SF  P + +I   + L+E +   E     L+F GVL I R
Sbjct:   162 SYLPLSDATFISFIIPAITAIVCFVFLKEPMSKHETFAGVLAFTGVLLIAR 212

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

SGD|S000004866 YMR253C "Putative protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 158 (60.7 bits), Expect = 4.5e-09, P = 4.5e-09
 Identities = 50/173 (28%), Positives = 84/173 (48%)

Query:   111 DVFMVQSIPLFETVFMRCTVTLI--LSYLWLRRS--GQPIFGPMHARNLLVLRALVGFLS 166
             D+   + I   + + +R  +T I  L Y+++ +S      FG    R  LVLR   GF  
Sbjct:    97 DIANDRQIKPLQILLVRMVITYIGTLIYMYINKSTISDVPFGKPEVRKWLVLRGCTGFFG 156

Query:   167 LFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKL-KIAEIGGLALSFFGVLFIFR 225
             +F   YS+  L +S A +++F AP +    + +ILRE+  K+  +G L +S  GV+ I R
Sbjct:   157 VFGMYYSLMYLTISDAVLITFLAPSLTIFLSWVILRERFTKVEALGSL-ISLLGVVLIVR 215

Query:   226 RILTTQAVSGGLVKPGEAISLNVRGSD---HMLAVLVGLFSSITGGISYCLIK 275
                   +   G  +  ++ S  V  SD    ++A LVGL+  +     Y +I+
Sbjct:   216 -----PSFLFGTPELTDSSSQIVESSDPKSRLIATLVGLWGVLGMSCVYIIIR 263

GO:0003674 "molecular_function" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISM;IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|I3LCX7 SLC35G1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 152 (58.6 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
 Identities = 41/138 (29%), Positives = 72/138 (52%)

Query:    92 GLMCMALSSTIY----FFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIF 147
             G+  M LS+ ++     F++ + D+  V+ I  F  VF    + +I+  L  R++G    
Sbjct:    72 GMFYMLLSAFLFSVAALFVKKVQDIHAVE-ISAFRCVFQ---MLIIIPCLIYRKTG--FI 125

Query:   148 GPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKI 207
             GP   R  L+LR ++G +S+    Y+ Q   L+ ATV++F+ P+  SI A I L+E+  +
Sbjct:   126 GPKDQRIFLILRGVLGSVSMILIYYAYQSTSLADATVITFSCPVFTSIFACIFLKERYSL 185

Query:   208 AEIGGLALSFFGVLFIFR 225
              +      +  GV+ I R
Sbjct:   186 WDAVFTVFTLTGVILIVR 203

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00141051 hypothetical protein (393 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	285
pfam00892	126	pfam00892, EamA, EamA-like transporter family	2e-12
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	2e-09
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	1e-05

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 62.2 bits (152), Expect = 2e-12
 Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 2/115 (1%)

Query: 113 FMVQSIPLFETVFMRCTVT--LILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSF 170
            +++ I        R  +   L++  L+L R    +        LL L      L    +
Sbjct: 12  KLLERISPLTFTAYRFLIAGILLILLLFLLRKPFALLSLKAILALLYLGLFGTALGYLLY 71

Query: 171 VYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR 225
            Y+++ +  S A+V++  +P+   I + ++L EKL + ++ G+ L   GVL I  
Sbjct: 72  FYALKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVLILLGVLLILL 126

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 57.2 bits (138), Expect = 2e-09
 Identities = 27/147 (18%), Positives = 58/147 (39%), Gaps = 2/147 (1%)

Query: 91  SGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPM 150
            GL+ + L   ++    +   + +    P      +R  +  +L    L    + +   +
Sbjct: 7   LGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPAL 66

Query: 151 HARN-LLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIIL-REKLKIA 208
                LL+L  L   L       +++    S A+++    P+  ++ A ++L  E+L + 
Sbjct: 67  RPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL 126

Query: 209 EIGGLALSFFGVLFIFRRILTTQAVSG 235
           +I G+ L+  GVL I         +S 
Sbjct: 127 QILGILLALAGVLLILLGGGGGGILSL 153

Length = 292

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 1/135 (0%)

Query: 92  GLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMH 151
           GL+    ++ ++     +              +       L+L   +L   G PI     
Sbjct: 155 GLLLALAAALLWALYTALVKRLSRLGPVTLALLLQLLLALLLLLLFFLSGFGAPILSRAW 214

Query: 152 ARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIG 211
              LL L      L+   + Y+++ L  S   +LS   P+ A++   ++L E L  A++ 
Sbjct: 215 LL-LLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLL 273

Query: 212 GLALSFFGVLFIFRR 226
           G AL   GVL    R
Sbjct: 274 GAALVVLGVLLASLR 288

Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	285
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.87
PRK15430	296	putative chloramphenical resistance permease RarD;	99.85
PRK11689	295	aromatic amino acid exporter; Provisional	99.84
PRK11272	292	putative DMT superfamily transporter inner membran	99.83
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.82
PLN00411	358	nodulin MtN21 family protein; Provisional	99.82
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.8
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.77
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.74
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.73
COG2510	140	Predicted membrane protein [Function unknown]	99.72
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.7
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.67
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.66
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.59
COG2962	293	RarD Predicted permeases [General function predict	99.59
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.59
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.57
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.55
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.47
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.37
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.37
PRK11689	295	aromatic amino acid exporter; Provisional	99.35
PRK11272	292	putative DMT superfamily transporter inner membran	99.33
PLN00411	358	nodulin MtN21 family protein; Provisional	99.29
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.2
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.18
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.06
PRK15430	296	putative chloramphenical resistance permease RarD;	99.05
KOG2765	416	consensus Predicted membrane protein [Function unk	99.05
COG0697	292	RhaT Permeases of the drug/metabolite transporter	98.99
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.97
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.94
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.94
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.93
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.9
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	98.86
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	98.85
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.84
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.59
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	98.52
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.4
KOG2766	336	consensus Predicted membrane protein [Function unk	98.37
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	98.35
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	98.32
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	98.32
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.24
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	98.24
PRK13499	345	rhamnose-proton symporter; Provisional	98.21
COG2962	293	RarD Predicted permeases [General function predict	98.21
PRK09541	110	emrE multidrug efflux protein; Reviewed	98.19
PRK10650	109	multidrug efflux system protein MdtI; Provisional	98.19
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	98.15
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	98.13
COG2076	106	EmrE Membrane transporters of cations and cationic	98.12
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.07
PRK11431	105	multidrug efflux system protein; Provisional	98.05
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	98.04
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.02
KOG3912	372	consensus Predicted integral membrane protein [Gen	97.96
KOG4510	346	consensus Permease of the drug/metabolite transpor	97.87
KOG1581	327	consensus UDP-galactose transporter related protei	97.7
KOG1443	349	consensus Predicted integral membrane protein [Fun	97.65
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	97.64
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	97.52
KOG2765	416	consensus Predicted membrane protein [Function unk	97.44
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	97.4
PRK13499	345	rhamnose-proton symporter; Provisional	97.33
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	97.32
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.26
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	97.17
KOG1581	327	consensus UDP-galactose transporter related protei	96.96
KOG1580	337	consensus UDP-galactose transporter related protei	96.94
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	96.85
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	96.66
KOG1580	337	consensus UDP-galactose transporter related protei	96.45
KOG2922	335	consensus Uncharacterized conserved protein [Funct	96.36
KOG1582	367	consensus UDP-galactose transporter related protei	95.95
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	95.89
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	95.39
PRK02237	109	hypothetical protein; Provisional	95.11
KOG4831	125	consensus Unnamed protein [Function unknown]	94.63
KOG1443	349	consensus Predicted integral membrane protein [Fun	94.59
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	94.51
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	94.33
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	94.21
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	93.09
KOG2766	336	consensus Predicted membrane protein [Function unk	92.99
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	92.67
COG1742	109	Uncharacterized conserved protein [Function unknow	91.92
PF04342	108	DUF486: Protein of unknown function, DUF486; Inter	90.58
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	89.52
PF06570	206	DUF1129: Protein of unknown function (DUF1129); In	87.31
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	86.51
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	86.35
KOG3912	372	consensus Predicted integral membrane protein [Gen	85.81
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	85.02
KOG1582	367	consensus UDP-galactose transporter related protei	83.68

>TIGR00688 rarD rarD protein

Probab=99.87  E-value=2.6e-20  Score=164.85  Aligned_cols=161  Identities=14%  Similarity=0.119  Sum_probs=133.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCC--------CCCcchHHHHHHHHHHH
Q 023258           91 SGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQP--------IFGPMHARNLLVLRALV  162 (285)
Q Consensus        91 ~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~--------~~~~~~~~~~l~~~~~~  162 (285)
                      +|++++++++++|+.+.++.|.+  .+++|.+++++|++++.++++++...++++        ...+++++..+.+.+++
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~--~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   79 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL--KPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL   79 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence            48999999999999999999983  569999999999999988877655333211        01122234456778888


Q ss_pred             HHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCc
Q 023258          163 GFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGE  242 (285)
Q Consensus       163 ~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~  242 (285)
                      .+.++.++++|++++++++++++.++.|+++++++++++|||+++++|++++++++|+.++..++..             
T Consensus        80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~-------------  146 (256)
T TIGR00688        80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGS-------------  146 (256)
T ss_pred             HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCC-------------
Confidence            8899999999999999999999999999999999999999999999999999999999988753111             


Q ss_pred             ccccccCCCchHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 023258          243 AISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGAN  279 (285)
Q Consensus       243 ~~~~~~~~~~~~~G~l~~llsa~~~A~~~v~~r~l~~  279 (285)
                               ..    +++++++++||+|.+..|+..+
T Consensus       147 ---------~~----~~~l~aa~~~a~~~i~~~~~~~  170 (256)
T TIGR00688       147 ---------LP----WEALVLAFSFTAYGLIRKALKN  170 (256)
T ss_pred             ---------ch----HHHHHHHHHHHHHHHHHhhcCC
Confidence                     11    4578899999999999999765

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.85  E-value=1.3e-19  Score=163.78  Aligned_cols=164  Identities=13%  Similarity=0.121  Sum_probs=134.2

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC-----CcchHHHHHHHHHHH
Q 023258           88 SRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIF-----GPMHARNLLVLRALV  162 (285)
Q Consensus        88 ~~~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~-----~~~~~~~~l~~~~~~  162 (285)
                      ++.+|++++++++++|+.+.+..|..  .+++|.+++++|+.++.++++++...+++...     +.++.+...+.+++.
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~--~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI--YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVL   82 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHH
Confidence            34789999999999999999999984  57999999999999998877666544432111     122333344566677


Q ss_pred             HHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCc
Q 023258          163 GFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGE  242 (285)
Q Consensus       163 ~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~  242 (285)
                      .+..+.++++|++++|+++++++.++.|+++++++++++|||+++++|+|++++++|+.++..+...             
T Consensus        83 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~-------------  149 (296)
T PRK15430         83 IGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGS-------------  149 (296)
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCC-------------
Confidence            7888999999999999999999999999999999999999999999999999999999998753211             


Q ss_pred             ccccccCCCchHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 023258          243 AISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGAN  279 (285)
Q Consensus       243 ~~~~~~~~~~~~~G~l~~llsa~~~A~~~v~~r~l~~  279 (285)
                               .    .+++++++++||+|.+..|+..+
T Consensus       150 ---------~----~~~~l~aa~~~a~~~i~~r~~~~  173 (296)
T PRK15430        150 ---------L----PIIALGLAFSFAFYGLVRKKIAV  173 (296)
T ss_pred             ---------c----cHHHHHHHHHHHHHHHHHHhcCC
Confidence                     0    14688899999999999998754

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.84  E-value=2.4e-19  Score=162.07  Aligned_cols=176  Identities=13%  Similarity=0.068  Sum_probs=136.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFS  169 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~  169 (285)
                      .++++++++++++||.+.+..|... ++++|+.+.++|+.++.++++++..++  +  .++++++..+.+++..+....+
T Consensus         3 ~~~~l~~l~a~~~Wg~~~~~~k~~~-~~~~P~~~~~~R~~~a~l~l~~~~~~~--~--~~~~~~~~~~~~~l~~~~~~~~   77 (295)
T PRK11689          3 QKATLIGLIAILLWSTMVGLIRGVS-ESLGPVGGAAMIYSVSGLLLLLTVGFP--R--LRQFPKRYLLAGGLLFVSYEIC   77 (295)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHH-ccCChHHHHHHHHHHHHHHHHHHcccc--c--cccccHHHHHHHhHHHHHHHHH
Confidence            5688999999999999999999977 889999999999999988887654211  1  1222334455555555566667


Q ss_pred             HHHHHh----ccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCcccc
Q 023258          170 FVYSIQ----RLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAIS  245 (285)
Q Consensus       170 ~~~al~----~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ++.+++    ++++.+++++.++.|+++.+++++++|||+++++++|++++++|+.++..++.....        ++.+ 
T Consensus        78 ~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~--------~~~~-  148 (295)
T PRK11689         78 LALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSL--------AELI-  148 (295)
T ss_pred             HHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchh--------hhhh-
Confidence            777765    467888999999999999999999999999999999999999999999876432110        0000 


Q ss_pred             cccCCCchHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 023258          246 LNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANAS  281 (285)
Q Consensus       246 ~~~~~~~~~~G~l~~llsa~~~A~~~v~~r~l~~~~  281 (285)
                        .+...+..|++++++++++||+|.++.|+..++.
T Consensus       149 --~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~  182 (295)
T PRK11689        149 --NNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK  182 (295)
T ss_pred             --hccccChHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence              0012345799999999999999999999987654

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.83  E-value=7.6e-19  Score=158.52  Aligned_cols=163  Identities=15%  Similarity=0.103  Sum_probs=134.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHH-HHHHHHHH
Q 023258           93 LMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVG-FLSLFSFV  171 (285)
Q Consensus        93 ~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~l~~~~~~  171 (285)
                      +++.++..++||.+.+..|... ++++|.+++++|+.+++++++++...++++.. +++.+......|.+. ...+.+++
T Consensus        10 ~~~~~~~~~iWg~~~~~~K~~~-~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~   87 (292)
T PRK11272         10 FGALFALYIIWGSTYLVIRIGV-ESWPPLMMAGVRFLIAGILLLAFLLLRGHPLP-TLRQWLNAALIGLLLLAVGNGMVT   87 (292)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC-cHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4567888999999999999977 79999999999999999888887766554433 344455455555544 56678888


Q ss_pred             HHH-hccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCcccccccCC
Q 023258          172 YSI-QRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRG  250 (285)
Q Consensus       172 ~al-~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (285)
                      ++. ++++++.++++.++.|+++.+++++ +|||+++++++|++++++|++++..++..                     
T Consensus        88 ~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~---------------------  145 (292)
T PRK11272         88 VAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL---------------------  145 (292)
T ss_pred             HHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc---------------------
Confidence            898 9999999999999999999999986 79999999999999999999988643211                     


Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 023258          251 SDHMLAVLVGLFSSITGGISYCLIKAGAN  279 (285)
Q Consensus       251 ~~~~~G~l~~llsa~~~A~~~v~~r~l~~  279 (285)
                      .....|++++++++++||.+.+..|+..+
T Consensus       146 ~~~~~G~l~~l~a~~~~a~~~~~~~~~~~  174 (292)
T PRK11272        146 SGNPWGAILILIASASWAFGSVWSSRLPL  174 (292)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            12457999999999999999999999765

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.82  E-value=2.5e-18  Score=155.62  Aligned_cols=164  Identities=18%  Similarity=0.221  Sum_probs=129.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHH-HHHHHHH
Q 023258           92 GLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVG-FLSLFSF  170 (285)
Q Consensus        92 G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~l~~~~~  170 (285)
                      ..+++++++++||.+.++.|... ++++|..+.++|+.++.+.++++..+++.       .++..+..++.. +..+.++
T Consensus         5 ~~l~~l~~~~~Wg~~~~~~k~~~-~~~~p~~~~~~R~~~a~~~l~~~~~~~~~-------~~~~~~~~g~~~~~~~~~~~   76 (299)
T PRK11453          5 DGVLALLVVVVWGLNFVVIKVGL-HNMPPLMLAGLRFMLVAFPAIFFVARPKV-------PLNLLLGYGLTISFGQFAFL   76 (299)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHhcCCCC-------chHHHHHHHHHHHHHHHHHH
Confidence            34668899999999999999987 78999999999999987666554432111       122334444444 3444577


Q ss_pred             HHHHhc-cchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCcccccccC
Q 023258          171 VYSIQR-LPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVR  249 (285)
Q Consensus       171 ~~al~~-~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (285)
                      +.++++ .+++.++++.++.|+++.+++++++|||+++++++|++++++|+.++..++...                   
T Consensus        77 ~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~-------------------  137 (299)
T PRK11453         77 FCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG-------------------  137 (299)
T ss_pred             HHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC-------------------
Confidence            789988 689999999999999999999999999999999999999999999988543211                   


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 023258          250 GSDHMLAVLVGLFSSITGGISYCLIKAGANASD  282 (285)
Q Consensus       250 ~~~~~~G~l~~llsa~~~A~~~v~~r~l~~~~~  282 (285)
                      ...+..|++++++++++||++.++.|+..++.+
T Consensus       138 ~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~  170 (299)
T PRK11453        138 QHVAMLGFMLTLAAAFSWACGNIFNKKIMSHST  170 (299)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence            122457999999999999999999999865443

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.82  E-value=2.2e-18  Score=159.34  Aligned_cols=193  Identities=15%  Similarity=0.091  Sum_probs=145.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCC--C-CCCcchHHHHHHHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQ--P-IFGPMHARNLLVLRALVGFLS  166 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~--~-~~~~~~~~~~l~~~~~~~~l~  166 (285)
                      .+.++.+++.-++++...++.|.+.+.+++|+.++++|+.++.++++++.+.+++  + +...++.+..+.+.|+++++.
T Consensus        12 ~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~   91 (358)
T PLN00411         12 AVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMY   91 (358)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHH
Confidence            5688999999999999999999998889999999999999999888887654322  2 222344556666677777667


Q ss_pred             HHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHH------hcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCC
Q 023258          167 LFSFVYSIQRLPLSQATVLSFTAPIMASIAARII------LREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKP  240 (285)
Q Consensus       167 ~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~------l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~  240 (285)
                      +.+++++++++++++++++.++.|++++++++++      +|||+++++++|++++++|+.++...+.......++.+..
T Consensus        92 ~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~  171 (358)
T PLN00411         92 VITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYL  171 (358)
T ss_pred             HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccc
Confidence            7789999999999999999999999999999999      6999999999999999999998875332100000000000


Q ss_pred             C--ccc-ccccCCCchHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 023258          241 G--EAI-SLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASD  282 (285)
Q Consensus       241 ~--~~~-~~~~~~~~~~~G~l~~llsa~~~A~~~v~~r~l~~~~~  282 (285)
                      +  +.. +......+...|.+++++++++||+|+++.|+..++.+
T Consensus       172 ~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~  216 (358)
T PLN00411        172 NFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP  216 (358)
T ss_pred             cccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            0  000 00011123467999999999999999999998866543

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.80  E-value=2.6e-18  Score=151.85  Aligned_cols=155  Identities=22%  Similarity=0.283  Sum_probs=130.7

Q ss_pred             HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhccchhHH
Q 023258          103 YFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQA  182 (285)
Q Consensus       103 ~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~al~~~~~~~a  182 (285)
                      ||.+.+..|...+...++..+.+.|++++.+++.++.+.+    ...+++++.+..+++...+.+.++++|+++++++++
T Consensus         1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~   76 (260)
T TIGR00950         1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEA   76 (260)
T ss_pred             CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhh
Confidence            7889999999775678999999999999988877765544    223444556666666778899999999999999999


Q ss_pred             HHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCcccccccCCCchHHHHHHHHH
Q 023258          183 TVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLF  262 (285)
Q Consensus       183 ~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~ll  262 (285)
                      +++.++.|+++.+++++++|||+++++++|++++++|+.++..++..                     ..+..|++++++
T Consensus        77 ~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~---------------------~~~~~G~~~~l~  135 (260)
T TIGR00950        77 ALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNL---------------------SINPAGLLLGLG  135 (260)
T ss_pred             HHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcc---------------------cccHHHHHHHHH
Confidence            99999999999999999999999999999999999999998754311                     235689999999


Q ss_pred             HHHHHHHHHHHHHhhcccCC
Q 023258          263 SSITGGISYCLIKAGANASD  282 (285)
Q Consensus       263 sa~~~A~~~v~~r~l~~~~~  282 (285)
                      ++++|+++.+..|+..++.+
T Consensus       136 a~~~~a~~~~~~k~~~~~~~  155 (260)
T TIGR00950       136 SGISFALGTVLYKRLVKKEG  155 (260)
T ss_pred             HHHHHHHHHHHHhHHhhcCC
Confidence            99999999999999876444

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.77  E-value=6e-17  Score=146.27  Aligned_cols=165  Identities=12%  Similarity=0.099  Sum_probs=132.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHH
Q 023258           89 RYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLF  168 (285)
Q Consensus        89 ~~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~  168 (285)
                      +.+|+.++++++++|+.+..+.|+.. ++.+|.++.++|++++.++++++.++++++ . +++.++..+..|++....+.
T Consensus        10 ~~~~~~~~~la~~~~~~~~~~~K~~~-~~~~~~~~~~~R~~~a~l~l~~~~~~~~~~-~-~~~~~~~~~~~g~~~~~~~~   86 (293)
T PRK10532         10 VWLPILLLLIAMASIQSGASLAKSLF-PLVGAPGVTALRLALGTLILIAIFKPWRLR-F-AKEQRLPLLFYGVSLGGMNY   86 (293)
T ss_pred             cchHHHHHHHHHHHHHhhHHHHHHHH-HHcCHHHHHHHHHHHHHHHHHHHHhHHhcc-C-CHHHHHHHHHHHHHHHHHHH
Confidence            36799999999999999999999987 679999999999999998887766543322 2 33445556677777788888


Q ss_pred             HHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCccccccc
Q 023258          169 SFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNV  248 (285)
Q Consensus       169 ~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~  248 (285)
                      +++++++++|++.++++.++.|+++.+++.    |++.+  +.++.++++|++++..++...                  
T Consensus        87 ~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~li~~~~~~~------------------  142 (293)
T PRK10532         87 LFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVD--FVWVVLAVLGLWFLLPLGQDV------------------  142 (293)
T ss_pred             HHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHH--HHHHHHHHHHHheeeecCCCc------------------
Confidence            999999999999999999999999998863    56554  455677899999887543221                  


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 023258          249 RGSDHMLAVLVGLFSSITGGISYCLIKAGANAS  281 (285)
Q Consensus       249 ~~~~~~~G~l~~llsa~~~A~~~v~~r~l~~~~  281 (285)
                       +..+..|++++++++++||++.+..|+..++.
T Consensus       143 -~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~  174 (293)
T PRK10532        143 -SHVDLTGAALALGAGACWAIYILSGQRAGAEH  174 (293)
T ss_pred             -ccCChHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence             12246899999999999999999999986643

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.74  E-value=2.7e-16  Score=141.10  Aligned_cols=163  Identities=15%  Similarity=0.083  Sum_probs=130.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHh--CC-CCCCcchHHHHHHHHHHHHHHHHHH
Q 023258           93 LMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRS--GQ-PIFGPMHARNLLVLRALVGFLSLFS  169 (285)
Q Consensus        93 ~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~--~~-~~~~~~~~~~~l~~~~~~~~l~~~~  169 (285)
                      +++.++++++|+...+..|... ++.++  ..++++..+.+++.++...+  ++ ....+++++...+++++.....+.+
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~-~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHA-DKEPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLG   79 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcC-CchhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence            5688999999999999999654 33333  34777777777776665543  22 2222445566677788888899999


Q ss_pred             HHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCcccccccC
Q 023258          170 FVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVR  249 (285)
Q Consensus       170 ~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (285)
                      +++++++.+++.++++.++.|+++++++++++|||+++++|+|++++++|++++..++..                    
T Consensus        80 ~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~--------------------  139 (281)
T TIGR03340        80 LAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA--------------------  139 (281)
T ss_pred             HHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc--------------------
Confidence            999999999999999999999999999999999999999999999999999998754321                    


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 023258          250 GSDHMLAVLVGLFSSITGGISYCLIKAGAN  279 (285)
Q Consensus       250 ~~~~~~G~l~~llsa~~~A~~~v~~r~l~~  279 (285)
                       ..+..|+.++++++++|++|.++.|+..+
T Consensus       140 -~~~~~g~~~~l~aal~~a~~~i~~k~~~~  168 (281)
T TIGR03340       140 -QHRRKAYAWALAAALGTAIYSLSDKAAAL  168 (281)
T ss_pred             -ccchhHHHHHHHHHHHHHHhhhhcccccc
Confidence             11346788999999999999999887643

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.73  E-value=5e-19  Score=152.24  Aligned_cols=183  Identities=21%  Similarity=0.354  Sum_probs=148.6

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHH
Q 023258           89 RYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLF  168 (285)
Q Consensus        89 ~~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~  168 (285)
                      ..+|+++..++ ..+....++.+..  ...+|.+..-.|+++-.+..+++...+.++...++..+++++++|+.++.+..
T Consensus        36 p~~gl~l~~vs-~ff~~~~vv~t~~--~e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvm  112 (346)
T KOG4510|consen   36 PNLGLLLLTVS-YFFNSCMVVSTKV--LENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVM  112 (346)
T ss_pred             CccCceehhhH-HHHhhHHHhhhhh--hccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHH
Confidence            36788888888 4455555555443  36899999999988888887777666666655566666778999999999999


Q ss_pred             HHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCccccccc
Q 023258          169 SFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNV  248 (285)
Q Consensus       169 ~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~  248 (285)
                      +.|||++|++.++|+++.++.|+++.+++|.++||+.++.+.++..+.+.||+||++|.+.++    .....++    +.
T Consensus       113 lmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG----~~t~g~~----~s  184 (346)
T KOG4510|consen  113 LMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFG----DTTEGED----SS  184 (346)
T ss_pred             HHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccC----CCccccc----cc
Confidence            999999999999999999999999999999999999999999999999999999999998753    2222222    11


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 023258          249 RGSDHMLAVLVGLFSSITGGISYCLIKAGANASD  282 (285)
Q Consensus       249 ~~~~~~~G~l~~llsa~~~A~~~v~~r~l~~~~~  282 (285)
                      .-..+..|.+.++.+++..|.-|++.|+++|+.+
T Consensus       185 ~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h  218 (346)
T KOG4510|consen  185 QVEYDIPGTVAAISSVLFGASVYIILRYIGKNAH  218 (346)
T ss_pred             cccccCCchHHHHHhHhhhhhHHHHHHHhhcccc
Confidence            2244567889999999999999999999987654

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.72  E-value=5e-17  Score=125.29  Aligned_cols=132  Identities=19%  Similarity=0.253  Sum_probs=121.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCC---cchHHHHHHHHHHHHHHHHH
Q 023258           92 GLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFG---PMHARNLLVLRALVGFLSLF  168 (285)
Q Consensus        92 G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~l~~~  168 (285)
                      -.+++++++++|+...++.|... +++||..-+++|.++..+++..++...++....   .++.|.++++.|+.+.++++
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl-~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl   82 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGL-EGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWL   82 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc-cccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHH
Confidence            56889999999999999999987 999999999999999988888888777665443   56678889999999999999


Q ss_pred             HHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhh
Q 023258          169 SFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF  224 (285)
Q Consensus       169 ~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~  224 (285)
                      +||.|++..+++.+..+..++|+++++++++++|||++..+|+|++++.+|++++.
T Consensus        83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            99999999999999999999999999999999999999999999999999998875

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.70  E-value=4.8e-15  Score=137.10  Aligned_cols=169  Identities=13%  Similarity=0.136  Sum_probs=135.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-HHHHHHHHHHHHHHHHHHHHHHhCC--CCCC-cchHHHHHHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIP-LFETVFMRCTVTLILSYLWLRRSGQ--PIFG-PMHARNLLVLRALVGFL  165 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~--~~~~-~~~~~~~l~~~~~~~~l  165 (285)
                      .+-.++.+.--.+-.......|.+. +.++ |+.++++|++++.++..++.....+  +... .+..++.++..|+++..
T Consensus        48 ~~~~~~~~~wy~~s~~~~~~nK~vl-~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~~  126 (350)
T PTZ00343         48 WKLALLFLTWYALNVLYVVDNKLAL-NMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHLF  126 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            4455566666666666777789987 7789 9999999999997765544332111  2121 34466778888888877


Q ss_pred             HHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCcccc
Q 023258          166 SLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAIS  245 (285)
Q Consensus       166 ~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      .....+.|+++++++.+.++.++.|+++++++++++|||++++++++++++++|+++....+.                 
T Consensus       127 ~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~-----------------  189 (350)
T PTZ00343        127 VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL-----------------  189 (350)
T ss_pred             HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc-----------------
Confidence            777778999999999999999999999999999999999999999999999999999874321                 


Q ss_pred             cccCCCchHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 023258          246 LNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANAS  281 (285)
Q Consensus       246 ~~~~~~~~~~G~l~~llsa~~~A~~~v~~r~l~~~~  281 (285)
                           ..++.|++++++++++||++.++.|++.++.
T Consensus       190 -----~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~  220 (350)
T PTZ00343        190 -----HFTWLAFWCAMLSNLGSSLRSIFAKKTMKNK  220 (350)
T ss_pred             -----hhHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence                 2257899999999999999999999976543

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.67  E-value=1.5e-14  Score=130.95  Aligned_cols=154  Identities=12%  Similarity=0.054  Sum_probs=123.5

Q ss_pred             HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHH-hCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhccchhHH
Q 023258          104 FFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRR-SGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQA  182 (285)
Q Consensus       104 a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~al~~~~~~~a  182 (285)
                      ....+..|.+...-..|..++++|+.++.+++.+.... .+++...+++.++.++..|++.++...+.++++++++++.+
T Consensus        15 ~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~   94 (302)
T TIGR00817        15 VYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFT   94 (302)
T ss_pred             HHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence            33445678877333779999999999987766554221 11222234556777888888888888999999999999999


Q ss_pred             HHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCcccccccCCCchHHHHHHHHH
Q 023258          183 TVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLF  262 (285)
Q Consensus       183 ~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~ll  262 (285)
                      +++.++.|+++++++++++|||+++++++|++++++|+.+....+                      ...+..|++++++
T Consensus        95 ~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~----------------------~~~~~~G~~~~l~  152 (302)
T TIGR00817        95 HTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE----------------------LSFNWAGFLSAMI  152 (302)
T ss_pred             HHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc----------------------ccccHHHHHHHHH
Confidence            999999999999999999999999999999999999998753211                      1234679999999


Q ss_pred             HHHHHHHHHHHHHhhcc
Q 023258          263 SSITGGISYCLIKAGAN  279 (285)
Q Consensus       263 sa~~~A~~~v~~r~l~~  279 (285)
                      ++++||++.+..|+..+
T Consensus       153 a~~~~a~~~v~~k~~~~  169 (302)
T TIGR00817       153 SNITFVSRNIFSKKAMT  169 (302)
T ss_pred             HHHHHHHHHHHHHHhhc
Confidence            99999999999999765

specificities overlap.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.66  E-value=2.2e-14  Score=127.70  Aligned_cols=169  Identities=19%  Similarity=0.202  Sum_probs=139.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHHHHHhCC-CCCCcchHHHHHHHHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQS-IPLFETVFMRCTVTLILSYLWLRRSGQ-PIFGPMHARNLLVLRALVGFLSL  167 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~~-~~p~~~~~~R~~~a~l~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~l~~  167 (285)
                      ..+..+.++.++.|+......|... ++ .++....+.|..++.++..+...+++. .....++.++..+.+++.....+
T Consensus         6 ~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (292)
T COG0697           6 LLGLLALLLWGLLWGLSFIALKLAV-ESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPF   84 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh-cccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHH
Confidence            5688889999999999999999976 44 777777888999988774444443321 22222224566777778888999


Q ss_pred             HHHHHHHhccchhHHHHHHhhHHHHHHHHHH-HHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCccccc
Q 023258          168 FSFVYSIQRLPLSQATVLSFTAPIMASIAAR-IILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISL  246 (285)
Q Consensus       168 ~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~-~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .+++.++++++++.++.+.++.|+++.++++ +++|||+++++++++.++++|++++..++.....              
T Consensus        85 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~--------------  150 (292)
T COG0697          85 LLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGI--------------  150 (292)
T ss_pred             HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchh--------------
Confidence            9999999999999999999999999999997 7679999999999999999999999987765311              


Q ss_pred             ccCCCchHHHHHHHHHHHHHHHHHHHHHHhhc
Q 023258          247 NVRGSDHMLAVLVGLFSSITGGISYCLIKAGA  278 (285)
Q Consensus       247 ~~~~~~~~~G~l~~llsa~~~A~~~v~~r~l~  278 (285)
                          . ...|+++++++++++|++.+..|+..
T Consensus       151 ----~-~~~g~~~~l~a~~~~a~~~~~~~~~~  177 (292)
T COG0697         151 ----L-SLLGLLLALAAALLWALYTALVKRLS  177 (292)
T ss_pred             ----H-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence                1 67999999999999999999999876

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.59  E-value=1.4e-14  Score=113.02  Aligned_cols=122  Identities=23%  Similarity=0.352  Sum_probs=100.0

Q ss_pred             HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCC---CCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 023258          101 TIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQ---PIFGPMHARNLLVLRALVGFLSLFSFVYSIQRL  177 (285)
Q Consensus       101 ~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~l~~~~~~~al~~~  177 (285)
                      ++||.+.++.|... ++.+|....++|+.++.+ ++++....++   .....+......+.+++...+++.+++++++++
T Consensus         1 ~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~   78 (126)
T PF00892_consen    1 FSWAIYSVFSKKLL-KKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI   78 (126)
T ss_pred             ceeeeHHHHHHHHh-ccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence            46999999999987 779999999999999986 4443333222   223333434444444444689999999999999


Q ss_pred             chhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhh
Q 023258          178 PLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF  224 (285)
Q Consensus       178 ~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~  224 (285)
                      +++.++.+.++.|+++.+++++++||++++++++|++++++|++++.
T Consensus        79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999875

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.59  E-value=1.4e-13  Score=120.67  Aligned_cols=162  Identities=18%  Similarity=0.192  Sum_probs=134.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCC-----CCcchHHHHHHHHHHHH
Q 023258           89 RYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPI-----FGPMHARNLLVLRALVG  163 (285)
Q Consensus        89 ~~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~-----~~~~~~~~~l~~~~~~~  163 (285)
                      ..+|+++++.+.++||......|.+  +++++.++...|.+.+.++++.+....+++.     .+.++.+....+.++..
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll--~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li   82 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLL--EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI   82 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHH--ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH
Confidence            3679999999999999999999995  6899999999999999887766554333221     22344556677788888


Q ss_pred             HHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCcc
Q 023258          164 FLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEA  243 (285)
Q Consensus       164 ~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~  243 (285)
                      ...+..|.+|+++-..-++++-+++.|++.++++++++|||+++.+|+++.++.+||..........             
T Consensus        83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~l-------------  149 (293)
T COG2962          83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSL-------------  149 (293)
T ss_pred             HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCC-------------
Confidence            8999999999999999999999999999999999999999999999999999999999877643322             


Q ss_pred             cccccCCCchHHHHHHHHHHHHHHHHHHHHHHhhc
Q 023258          244 ISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGA  278 (285)
Q Consensus       244 ~~~~~~~~~~~~G~l~~llsa~~~A~~~v~~r~l~  278 (285)
                               +    ..++.-+++|+.|..+-|++.
T Consensus       150 ---------p----wval~la~sf~~Ygl~RK~~~  171 (293)
T COG2962         150 ---------P----WVALALALSFGLYGLLRKKLK  171 (293)
T ss_pred             ---------c----HHHHHHHHHHHHHHHHHHhcC
Confidence                     2    566677788998887777654

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.59  E-value=1.2e-13  Score=125.86  Aligned_cols=180  Identities=16%  Similarity=0.143  Sum_probs=135.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-HHHHHHHHHHHHHHHHHHHH-HHhCCC--CCCcchHHHHHHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIP-LFETVFMRCTVTLILSYLWL-RRSGQP--IFGPMHARNLLVLRALVGFL  165 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~-p~~~~~~R~~~a~l~l~~~~-~~~~~~--~~~~~~~~~~l~~~~~~~~l  165 (285)
                      .++++++-+-++|-..+++.+..+...+.+ |..-.++-++.-.++..++. .+++..  ....++.++..++.+++...
T Consensus        12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~   91 (334)
T PF06027_consen   12 WIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVE   91 (334)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHH
Confidence            568888888899999999998886644333 44444444443333333333 232221  11122334445556899999


Q ss_pred             HHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCcccc
Q 023258          166 SLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAIS  245 (285)
Q Consensus       166 ~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~  245 (285)
                      ++++...|++|++.+.++++..+.-+++++++++++|+|.++.+++|++++++|+.+++..+...+.         +   
T Consensus        92 aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~---------~---  159 (334)
T PF06027_consen   92 ANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGS---------D---  159 (334)
T ss_pred             HHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccc---------c---
Confidence            9999999999999999999999999999999999999999999999999999999999887654321         0   


Q ss_pred             cccCCCchHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 023258          246 LNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASD  282 (285)
Q Consensus       246 ~~~~~~~~~~G~l~~llsa~~~A~~~v~~r~l~~~~~  282 (285)
                       +..+.+..+|++++++++++||+++++.+++.++.+
T Consensus       160 -~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~  195 (334)
T PF06027_consen  160 -SSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAP  195 (334)
T ss_pred             -CCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence             113456899999999999999999999999887554

Some of the sequences in this family are annotated as putative membrane proteins.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.57  E-value=2.3e-13  Score=116.78  Aligned_cols=164  Identities=13%  Similarity=0.124  Sum_probs=138.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 023258           92 GLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFV  171 (285)
Q Consensus        92 G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~  171 (285)
                      .+++.+.+++.--....+.|.++ +.+++.-++.+|..++.++++.+.+..+++  ..++.+..++.+|......+++||
T Consensus        13 p~~~ll~amvsiq~Gas~Ak~LF-P~vG~~g~t~lRl~~aaLIll~l~RPwr~r--~~~~~~~~~~~yGvsLg~MNl~FY   89 (292)
T COG5006          13 PILALLVAMVSIQSGASFAKSLF-PLVGAAGVTALRLAIAALILLALFRPWRRR--LSKPQRLALLAYGVSLGGMNLLFY   89 (292)
T ss_pred             cHHHHHHHHHHHHhhHHHHHHHc-cccChhhHHHHHHHHHHHHHHHHhhHHHhc--cChhhhHHHHHHHHHHHHHHHHHH
Confidence            57788888888888889999988 999999999999999999888777654432  255567888999999999999999


Q ss_pred             HHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCcccccccCCC
Q 023258          172 YSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGS  251 (285)
Q Consensus       172 ~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (285)
                      .+++++|.+.+..+.++.|+...+++.-      +.++.+.+.+++.|+.++.-.+..                   ...
T Consensus        90 ~si~riPlGiAVAiEF~GPL~vA~~~sR------r~~d~vwvaLAvlGi~lL~p~~~~-------------------~~~  144 (292)
T COG5006          90 LSIERIPLGIAVAIEFTGPLAVALLSSR------RLRDFVWVALAVLGIWLLLPLGQS-------------------VWS  144 (292)
T ss_pred             HHHHhccchhhhhhhhccHHHHHHHhcc------chhhHHHHHHHHHHHHhheeccCC-------------------cCc
Confidence            9999999999999999999999988765      667888888999999988654433                   235


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 023258          252 DHMLAVLVGLFSSITGGISYCLIKAGANASDQ  283 (285)
Q Consensus       252 ~~~~G~l~~llsa~~~A~~~v~~r~l~~~~~~  283 (285)
                      .++.|..+++.++.||++|.+..+|..+..++
T Consensus       145 lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g  176 (292)
T COG5006         145 LDPVGVALALGAGACWALYIVLGQRAGRAEHG  176 (292)
T ss_pred             CCHHHHHHHHHHhHHHHHHHHHcchhcccCCC
Confidence            68899999999999999999999998864443

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.55  E-value=3.6e-13  Score=121.55  Aligned_cols=168  Identities=14%  Similarity=0.055  Sum_probs=132.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 023258           92 GLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFV  171 (285)
Q Consensus        92 G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~  171 (285)
                      +++++++++++||...+..|...  +.++.++.  |..++.+++..+....+.+....++.+...++.|+....++++++
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~l~G~~w~ig~~~~~   77 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLPEFWALSIFLVGLLSGAFWALGQINQF   77 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHhhhhhHH
Confidence            67899999999999999999853  77887775  777777666554433332223335556667777888889999999


Q ss_pred             HHHhccchhHHHHHHh-hHHHHHHHHHHHHhcCcCcHHH----HHHHHHHHHHHHHhhccccccccccCCCCCCCccccc
Q 023258          172 YSIQRLPLSQATVLSF-TAPIMASIAARIILREKLKIAE----IGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISL  246 (285)
Q Consensus       172 ~al~~~~~~~a~~l~~-~~Pl~~~ll~~~~l~e~~~~~~----~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      .++++++.+.+..+.+ +.+++..+++.+++||+.++++    ++|++++++|++++...+....            +++
T Consensus        78 ~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~------------~~~  145 (290)
T TIGR00776        78 KSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSA------------GIK  145 (290)
T ss_pred             HHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccc------------ccc
Confidence            9999999999999988 8889999999999999999999    9999999999988865432210            000


Q ss_pred             ccCCCchHHHHHHHHHHHHHHHHHHHHHHhh
Q 023258          247 NVRGSDHMLAVLVGLFSSITGGISYCLIKAG  277 (285)
Q Consensus       247 ~~~~~~~~~G~l~~llsa~~~A~~~v~~r~l  277 (285)
                      +  ..+...|++++++++++|+.|.+..|+.
T Consensus       146 ~--~~~~~~Gi~~~l~sg~~y~~~~~~~~~~  174 (290)
T TIGR00776       146 S--EFNFKKGILLLLMSTIGYLVYVVVAKAF  174 (290)
T ss_pred             c--ccchhhHHHHHHHHHHHHHHHHHHHHHc
Confidence            0  0224679999999999999999999976

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.47  E-value=3.5e-12  Score=112.62  Aligned_cols=132  Identities=19%  Similarity=0.160  Sum_probs=107.4

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCH--HHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHH-HHHHHHHHHHH
Q 023258           89 RYSGLMCMALSSTIYFFMQVISDVFMVQSIPL--FETVFMRCTVTLILSYLWLRRSGQPIFGPMHARN-LLVLRALVGFL  165 (285)
Q Consensus        89 ~~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p--~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~l  165 (285)
                      ..+|.+++++++++|+.+.+..|... ++.++  .....+++.++.++++++....++........+. .+..+.+...+
T Consensus       126 ~~~G~~~~l~a~~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (260)
T TIGR00950       126 NPAGLLLGLGSGISFALGTVLYKRLV-KKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTAL  204 (260)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhHHh-hcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHH
Confidence            46799999999999999999999976 55664  4555577888888887776655433322333333 44444555689


Q ss_pred             HHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHH
Q 023258          166 SLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVL  221 (285)
Q Consensus       166 ~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~  221 (285)
                      ++.+|++++++.+++.++++.++.|++++++++++++|+++..+++|.+++++|+.
T Consensus       205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999873

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.37  E-value=8.4e-12  Score=96.92  Aligned_cols=104  Identities=19%  Similarity=0.285  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHHHHHHHHhCCCCC----CcchHHHHHHHHHHHH-HHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHH
Q 023258          125 FMRCTVTLILSYLWLRRSGQPIF----GPMHARNLLVLRALVG-FLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARI  199 (285)
Q Consensus       125 ~~R~~~a~l~l~~~~~~~~~~~~----~~~~~~~~l~~~~~~~-~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~  199 (285)
                      .+|+.++.+++..+...+++...    .+++.+...+..++.+ ..++.++++|+++.| +.++.+.++.|+++++++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            57899998888777666543211    1223334455556655 488999999999999 58889999999999999999


Q ss_pred             HhcCcCcHHHHHHHHHHHHHHHHhhccccc
Q 023258          200 ILREKLKIAEIGGLALSFFGVLFIFRRILT  229 (285)
Q Consensus       200 ~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~  229 (285)
                      ++|||+++++|++++++++|+.++..++..
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            999999999999999999999999877654

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.37  E-value=5.5e-11  Score=107.42  Aligned_cols=136  Identities=12%  Similarity=0.003  Sum_probs=106.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHH-HHHHHHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARN-LLVLRALVGFLSLF  168 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~l~~~  168 (285)
                      ..|.+++++++++|+.+.+..|... ++.++..+... .+++.+++.++..............+. .+.++.++..+++.
T Consensus       147 ~~G~ll~l~aa~~~a~~~v~~r~~~-~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~~  224 (293)
T PRK10532        147 LTGAALALGAGACWAIYILSGQRAG-AEHGPATVAIG-SLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPYS  224 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHh-ccCCchHHHHH-HHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            5699999999999999999999875 66777776544 455555555554443321112222232 33444555678899


Q ss_pred             HHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccc
Q 023258          169 SFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRI  227 (285)
Q Consensus       169 ~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~  227 (285)
                      +|++++++++++.++++.+++|+++.++++++++|+++..+++|.+++++|+++.....
T Consensus       225 l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        225 LEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999986543

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.35  E-value=5.3e-11  Score=107.61  Aligned_cols=133  Identities=15%  Similarity=0.126  Sum_probs=101.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCC-CCcchHHHHHHHHHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPI-FGPMHARNLLVLRALVGFLSLF  168 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~l~~~  168 (285)
                      ..|.+++++++++|+.+.+..|... ++.++....+   ..+.+++.+......... ......+..++..++...+++.
T Consensus       155 ~~G~~~~l~aa~~~A~~~v~~k~~~-~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~  230 (295)
T PRK11689        155 PLSYGLAFIGAFIWAAYCNVTRKYA-RGKNGITLFF---ILTALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFGYA  230 (295)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcc-CCCCchhHHH---HHHHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHHHH
Confidence            4599999999999999999999965 5667765432   222233322222222211 1223344445556667788999


Q ss_pred             HHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhcc
Q 023258          169 SFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRR  226 (285)
Q Consensus       169 ~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~  226 (285)
                      +|++++++++++.++.+.++.|++++++++++++|+++..+++|.+++++|+++....
T Consensus       231 l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~  288 (295)
T PRK11689        231 AWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA  288 (295)
T ss_pred             HHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence            9999999999999999999999999999999999999999999999999999887653

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.33  E-value=1.2e-10  Score=105.20  Aligned_cols=135  Identities=15%  Similarity=0.121  Sum_probs=107.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC--Cc-chHHHHHHHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIF--GP-MHARNLLVLRALVGFLS  166 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~--~~-~~~~~~l~~~~~~~~l~  166 (285)
                      ..|.+++++++++|+.+.+..|... . .++.....+++.++.+++.++.........  .. ..+...++++.+...++
T Consensus       149 ~~G~l~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        149 PWGAILILIASASWAFGSVWSSRLP-L-PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcC-C-CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence            5799999999999999999999854 2 345566778888887777666554332211  12 23333444444456789


Q ss_pred             HHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhcc
Q 023258          167 LFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRR  226 (285)
Q Consensus       167 ~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~  226 (285)
                      +.+|++++++.++++++++.++.|++++++++++++|+++..+++|.+++++|++++...
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999988653

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.29  E-value=2.2e-10  Score=106.13  Aligned_cols=137  Identities=11%  Similarity=0.097  Sum_probs=102.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCH-HHHHHHHHHHHHHHHHHHHHH-hCCCC--C--CcchHHHHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIPL-FETVFMRCTVTLILSYLWLRR-SGQPI--F--GPMHARNLLVLRALVG  163 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p-~~~~~~R~~~a~l~l~~~~~~-~~~~~--~--~~~~~~~~l~~~~~~~  163 (285)
                      ..|.+++++++++|+++.++.|... ...++ ....++.++++.+.+.+.... .+...  +  ........++..+++.
T Consensus       188 ~lG~~l~l~aa~~wa~~~il~~~~~-~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~t  266 (358)
T PLN00411        188 LIGGALLTIQGIFVSVSFILQAHIM-SEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAIIT  266 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHHH
Confidence            4599999999999999999998865 44544 455666666655544333322 22111  1  0111112233344555


Q ss_pred             HHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccc
Q 023258          164 FLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRI  227 (285)
Q Consensus       164 ~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~  227 (285)
                      .+++.+|++++++.+++.+++..++.|++++++++++++|+++..+++|.+++++|++++..+.
T Consensus       267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~  330 (358)
T PLN00411        267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK  330 (358)
T ss_pred             HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence            6788889999999999999999999999999999999999999999999999999999987643

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.20  E-value=1.4e-10  Score=104.15  Aligned_cols=133  Identities=11%  Similarity=0.075  Sum_probs=97.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHH----HHHHHHHHHHHHHHHHHHHHhCCC-C-CCcchHHHHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIPLF----ETVFMRCTVTLILSYLWLRRSGQP-I-FGPMHARNLLVLRALVG  163 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~----~~~~~R~~~a~l~l~~~~~~~~~~-~-~~~~~~~~~l~~~~~~~  163 (285)
                      ..|.+++++++++|+.+.+..|... .+.++.    ....+.++...+.+.++...++.. . ......+......++..
T Consensus       143 ~~g~~~~l~aal~~a~~~i~~k~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  221 (281)
T TIGR03340       143 RKAYAWALAAALGTAIYSLSDKAAA-LGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQILPSATLGGLMI  221 (281)
T ss_pred             hhHHHHHHHHHHHHHHhhhhccccc-cchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHH
Confidence            5688899999999999999988743 333332    233333333312222222222221 1 12234455566777777


Q ss_pred             HHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHh
Q 023258          164 FLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFI  223 (285)
Q Consensus       164 ~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li  223 (285)
                      .+++.++++++++.+++.++.+.++.|+++.+++++++||+++..+++|++++++|++++
T Consensus       222 ~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l~  281 (281)
T TIGR03340       222 GGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVVL  281 (281)
T ss_pred             HHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHhC
Confidence            899999999999999999999999999999999999999999999999999999999863

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.18  E-value=2.3e-09  Score=97.02  Aligned_cols=139  Identities=14%  Similarity=0.155  Sum_probs=101.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHHH-HhCCC-------CCCcchHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQS--IPLFETVFMRCTVTLILSYLWLR-RSGQP-------IFGPMHARNLLVLR  159 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~~--~~p~~~~~~R~~~a~l~l~~~~~-~~~~~-------~~~~~~~~~~l~~~  159 (285)
                      ..|.+++++++++|+.+.+..|......  .......++-++++.+.+..... ..+..       ......+...+.++
T Consensus       142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  221 (299)
T PRK11453        142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA  221 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence            4699999999999999999999864222  22233344444444333322221 11111       11223334444555


Q ss_pred             HHHHHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhcccc
Q 023258          160 ALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRIL  228 (285)
Q Consensus       160 ~~~~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~  228 (285)
                      .+...+++.+|++++++.+++.++.+.++.|+++.++++++++|+++..+++|.+++++|+++...+..
T Consensus       222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence            566678999999999999999999999999999999999999999999999999999999998876543

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.06  E-value=2.6e-09  Score=96.77  Aligned_cols=136  Identities=13%  Similarity=0.144  Sum_probs=104.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCc------------chHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQ--SIPLFETVFMRCTVTLILSYLWLRRSGQPIFGP------------MHARNL  155 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~--~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~------------~~~~~~  155 (285)
                      ..|.+++++++++|+++.+..|... +  +.++..+..+.+.++.++++++...........            ...+..
T Consensus       144 ~~G~~~~l~a~~~~a~~~v~~k~~~-~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (302)
T TIGR00817       144 WAGFLSAMISNITFVSRNIFSKKAM-TIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV  222 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence            5699999999999999999999876 5  789999999999988888877755432111000            001111


Q ss_pred             HHHHHH-HHHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhcc
Q 023258          156 LVLRAL-VGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRR  226 (285)
Q Consensus       156 l~~~~~-~~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~  226 (285)
                      .+..++ +..+.+.+++++++++++..++++.++.|++++++++++++|+++..+++|.+++++|+++....
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~  294 (302)
T TIGR00817       223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRV  294 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHH
Confidence            112222 22233356678999999999999999999999999999999999999999999999999987654

specificities overlap.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.05  E-value=9e-09  Score=93.08  Aligned_cols=134  Identities=16%  Similarity=0.219  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHHHHHhCCCCC--CcchHHHHHHHHHHHHHHHHHHH
Q 023258           94 MCMALSSTIYFFMQVISDVFMVQS-IPLFETVFMRCTVTLILSYLWLRRSGQPIF--GPMHARNLLVLRALVGFLSLFSF  170 (285)
Q Consensus        94 l~~l~a~~~~a~~~v~~k~~~~~~-~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~l~~~~~  170 (285)
                      +++++++++|+.+.+..|....+. .+......+-..++.+....... ......  .+...+..++..++...+++.++
T Consensus       152 ~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~t~i~~~~~  230 (296)
T PRK15430        152 IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIAD-SSTSHMGQNPMSLNLLLIAAGIVTTVPLLCF  230 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHcc-CCcccccCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            467889999999999998853111 22233333333333333221111 111111  11122344555566777999999


Q ss_pred             HHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhcccc
Q 023258          171 VYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRIL  228 (285)
Q Consensus       171 ~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~  228 (285)
                      ++++++.+++.++++.++.|+++.++++++++|+++..+++|++++++|+.++...+.
T Consensus       231 ~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~  288 (296)
T PRK15430        231 TAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAI  288 (296)
T ss_pred             HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999988876554

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.05  E-value=8.9e-10  Score=99.64  Aligned_cols=119  Identities=17%  Similarity=0.212  Sum_probs=103.0

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhcccc
Q 023258          149 PMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRIL  228 (285)
Q Consensus       149 ~~~~~~~l~~~~~~~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~  228 (285)
                      .++..+..+....+.+++++.+..|+.+++++..+++.++.-+|+..++.++-.||+++.+.++.++.+.||+++...+.
T Consensus       155 ~~~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s  234 (416)
T KOG2765|consen  155 ATQTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDS  234 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccc
Confidence            44556677777888899999999999999999999999999999999999999999999999999999999999987654


Q ss_pred             ccccccCCCCCCCcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 023258          229 TTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANAS  281 (285)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~llsa~~~A~~~v~~r~l~~~~  281 (285)
                      ..+              ++........|.++++++|+.||+|.++.|+-...+
T Consensus       235 ~~~--------------~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~e  273 (416)
T KOG2765|consen  235 KQN--------------SDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDE  273 (416)
T ss_pred             ccc--------------ccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            321              123446678999999999999999999999866544

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=98.99  E-value=4.3e-08  Score=87.10  Aligned_cols=134  Identities=20%  Similarity=0.278  Sum_probs=102.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHH-HHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHH-HHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVF-MRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGF-LSL  167 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~-~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-l~~  167 (285)
                      ..|.+++++++++|+++.+..|...  ..++..... +.+....++.......... .......+..+...++... +++
T Consensus       153 ~~g~~~~l~a~~~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~i~~  229 (292)
T COG0697         153 LLGLLLALAAALLWALYTALVKRLS--RLGPVTLALLLQLLLALLLLLLFFLSGFG-APILSRAWLLLLYLGVFSTGLAY  229 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHHhcccc-ccCCHHHHHHHHHHHHHHHHHHH
Confidence            4799999999999999999999854  566666666 3333222222222222211 2223334555555565554 799


Q ss_pred             HHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhcc
Q 023258          168 FSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRR  226 (285)
Q Consensus       168 ~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~  226 (285)
                      .++++++++.++..++.+.++.|+++.++++++++|+++..+++|..+++.|+.++...
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         230 LLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999999988754

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.97  E-value=1.2e-07  Score=86.09  Aligned_cols=151  Identities=13%  Similarity=0.104  Sum_probs=118.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHH
Q 023258          119 PLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAAR  198 (285)
Q Consensus       119 ~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~  198 (285)
                      .|..+++..+....++..+.....+.. ..++..++..+..+++.+++..+-+.|++++|...-.++.+..|++++++++
T Consensus        31 ~~~~lt~~q~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~  109 (303)
T PF08449_consen   31 FPLFLTFVQFAFNALFSFILLSLFKFP-KSRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGV  109 (303)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhcccc-CCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHH
Confidence            388999999998887776655544412 2233345566777888899999999999999999999999999999999999


Q ss_pred             HHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHhhc
Q 023258          199 IILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGA  278 (285)
Q Consensus       199 ~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~llsa~~~A~~~v~~r~l~  278 (285)
                      +++|+|.+++++++.++..+|+.+....+.....            +.+........|+++.+++.++.|...+..+++-
T Consensus       110 l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~------------~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~  177 (303)
T PF08449_consen  110 LILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS------------SSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLF  177 (303)
T ss_pred             HhcCccccHHHHHHHHHHHhhHheeeeccccccc------------ccccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999998776544211            0011112233499999999999999999999877


Q ss_pred             ccCC
Q 023258          279 NASD  282 (285)
Q Consensus       279 ~~~~  282 (285)
                      ++.+
T Consensus       178 ~~~~  181 (303)
T PF08449_consen  178 KKYG  181 (303)
T ss_pred             HHhC
Confidence            5444

; GO: 0055085 transmembrane transport

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.94  E-value=6.1e-08  Score=89.82  Aligned_cols=135  Identities=10%  Similarity=0.111  Sum_probs=99.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHHHHhCC-C----------CCCc---
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQ------SIPLFETVFMRCTVTLILSYLWLRRSGQ-P----------IFGP---  149 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~------~~~p~~~~~~R~~~a~l~l~~~~~~~~~-~----------~~~~---  149 (285)
                      ..|.+++++++++|++..+..|.....      +.++..+..+-..++.++++++...... .          ....   
T Consensus       193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~  272 (350)
T PTZ00343        193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK  272 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence            469999999999999999999997632      3567777766677787777776542211 0          0000   


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhh
Q 023258          150 MHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF  224 (285)
Q Consensus       150 ~~~~~~l~~~~~~~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~  224 (285)
                      ......++..++..++.+.+.|++++++++..+++..++-|+++.++++++++|+++..+++|.+++++|+++..
T Consensus       273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            011112223333334444455579999999999999999999999999999999999999999999999998753

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.94  E-value=2.5e-08  Score=90.07  Aligned_cols=129  Identities=19%  Similarity=0.235  Sum_probs=101.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHH---HHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCT---VTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLS  166 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~---~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~  166 (285)
                      .+|++++++++++|+.+.+..|..   +.+|....+..+.   ++..++.... ++. ++...+ ..+..++.|++..++
T Consensus       151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~-~~~~~~-~~~~~~~~Gi~~~ia  224 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH-ILA-KPLKKY-AILLNILPGLMWGIG  224 (290)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH-hcc-cchHHH-HHHHHHHHHHHHHHH
Confidence            579999999999999999999974   4788888655554   3333222222 111 222222 333445577778888


Q ss_pred             HHHHHHHHh-ccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHH----HHHHHHHHHHHHhh
Q 023258          167 LFSFVYSIQ-RLPLSQATVLSFTAPIMASIAARIILREKLKIAEI----GGLALSFFGVLFIF  224 (285)
Q Consensus       167 ~~~~~~al~-~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~----ig~~l~l~Gv~li~  224 (285)
                      +.+|+.+.+ +.+++.+.++.+..|+.+.+++++++||+.+++++    +|.++++.|+.++.
T Consensus       225 ~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~  287 (290)
T TIGR00776       225 NFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG  287 (290)
T ss_pred             HHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence            999999999 99999999999999999999999999999999999    99999999998874

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.93  E-value=7.4e-08  Score=78.15  Aligned_cols=131  Identities=21%  Similarity=0.273  Sum_probs=111.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHHHHhCCCC--------CC-----cchH
Q 023258           92 GLMCMALSSTIYFFMQVISDVFMVQ------SIPLFETVFMRCTVTLILSYLWLRRSGQPI--------FG-----PMHA  152 (285)
Q Consensus        92 G~l~~l~a~~~~a~~~v~~k~~~~~------~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~--------~~-----~~~~  152 (285)
                      |.++++++.++.++..+..|....+      +.++.++..+-...+.++++++........        ..     ....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            6789999999999999999886644      789999999999999888877655432211        00     2244


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHH
Q 023258          153 RNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLF  222 (285)
Q Consensus       153 ~~~l~~~~~~~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~l  222 (285)
                      +..++..+++.++.+++.+..++++++-..+++..+-.+++.++++++++|+++..+++|++++++|+++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            5667778888889999999999999999999999999999999999999999999999999999999864

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.90  E-value=8.3e-08  Score=74.23  Aligned_cols=65  Identities=15%  Similarity=0.161  Sum_probs=60.4

Q ss_pred             HHHHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhc
Q 023258          161 LVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR  225 (285)
Q Consensus       161 ~~~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~  225 (285)
                      ++..++++++.++++++|.+.+..+.++.++++++++++++|||++.++++|+.++++|+.++..
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            44567889999999999999999999999999999999999999999999999999999998753

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=98.86  E-value=6.2e-08  Score=85.26  Aligned_cols=130  Identities=15%  Similarity=0.129  Sum_probs=103.1

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccc
Q 023258          150 MHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILT  229 (285)
Q Consensus       150 ~~~~~~l~~~~~~~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~  229 (285)
                      ++....+.+=+++..+.+.+.|+++++++++.-.++..+-.+++++++++++|+|+++++|+++++.++|+.++-.+...
T Consensus        14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            33455666777888899999999999999999999999999999999999999999999999999999999998665544


Q ss_pred             cccccCCCCCCCcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 023258          230 TQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQP  284 (285)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~llsa~~~A~~~v~~r~l~~~~~~p  284 (285)
                      ...    .. .++..+.+....+...|+++.++++++.+++.+..+++-|+.+.|
T Consensus        94 ~~~----~~-~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s  143 (244)
T PF04142_consen   94 SSD----NS-SSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVS  143 (244)
T ss_pred             ccc----cc-cccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchh
Confidence            210    00 000000111235578999999999999999999999988877654

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=98.85  E-value=1.1e-07  Score=82.01  Aligned_cols=131  Identities=15%  Similarity=0.068  Sum_probs=107.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHH-HHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVG-FLSLF  168 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~l~~~  168 (285)
                      ..|..+++.++.||+.+-+..|... +..+--.-+.+-+.++.++.+++-.................+..+++. .+-+.
T Consensus       147 p~Gv~~Al~AG~~Wa~YIv~G~r~g-~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYs  225 (292)
T COG5006         147 PVGVALALGAGACWALYIVLGQRAG-RAEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPYS  225 (292)
T ss_pred             HHHHHHHHHHhHHHHHHHHHcchhc-ccCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccchH
Confidence            6799999999999999999998865 466667777888899999888887655444333444444444444444 57778


Q ss_pred             HHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHH
Q 023258          169 SFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVL  221 (285)
Q Consensus       169 ~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~  221 (285)
                      +-..+++++|...-.++.++.|.+.++.++++++|+++..||+++.+++++..
T Consensus       226 LEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         226 LEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             HHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            88999999999999999999999999999999999999999999998887664

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.84  E-value=1.8e-07  Score=74.20  Aligned_cols=120  Identities=21%  Similarity=0.210  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHH
Q 023258           91 SGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSF  170 (285)
Q Consensus        91 ~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~  170 (285)
                      .|+++.+++.++-+...++.|... .+.+..+.... . ...+.    . ..        .....++++.++..+++++|
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~-~~~g~~~~~~~-~-~~~~~----~-~~--------~p~~~i~lgl~~~~la~~~w   65 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGM-SRLPLLSHAWD-F-IAALL----A-FG--------LALRAVLLGLAGYALSMLCW   65 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHH-hhCCCccchhH-H-HHHHH----H-Hh--------ccHHHHHHHHHHHHHHHHHH
Confidence            378999999999999999999976 44433332211 1 00000    0 00        01234566777778999999


Q ss_pred             HHHHhccchhHHHHHHhhHHHHHHHHHHH--HhcCcCcHHHHHHHHHHHHHHHHhhcc
Q 023258          171 VYSIQRLPLSQATVLSFTAPIMASIAARI--ILREKLKIAEIGGLALSFFGVLFIFRR  226 (285)
Q Consensus       171 ~~al~~~~~~~a~~l~~~~Pl~~~ll~~~--~l~e~~~~~~~ig~~l~l~Gv~li~~~  226 (285)
                      .+++++.|++.+..+.+..+.++.+.++.  ++||+++..+++|++++++|++++..+
T Consensus        66 ~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~  123 (129)
T PRK02971         66 LKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP  123 (129)
T ss_pred             HHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence            99999999999999999999999888885  899999999999999999999998754

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.59  E-value=2.3e-06  Score=78.40  Aligned_cols=140  Identities=19%  Similarity=0.098  Sum_probs=107.6

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHh-CCC---CCCcchHHHHHHHHHHHH
Q 023258           88 SRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRS-GQP---IFGPMHARNLLVLRALVG  163 (285)
Q Consensus        88 ~~~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~-~~~---~~~~~~~~~~l~~~~~~~  163 (285)
                      +..+|.++++++++++|+++++.+... .+.+..+....=.+++.++..+.+..- +..   ...+.+...+++...++.
T Consensus       165 ~~i~GDll~l~~a~lya~~nV~~E~~v-~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~l  243 (334)
T PF06027_consen  165 NPILGDLLALLGAILYAVSNVLEEKLV-KKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCL  243 (334)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHH
Confidence            347899999999999999999999977 778888888777777777766544321 111   112333344444455555


Q ss_pred             HHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhcccc
Q 023258          164 FLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRIL  228 (285)
Q Consensus       164 ~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~  228 (285)
                      +..+.+.-..+++.++....+=.-+..+++++++++++|+++++..++|.+++++|+++....+.
T Consensus       244 f~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~  308 (334)
T PF06027_consen  244 FLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAES  308 (334)
T ss_pred             HHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCC
Confidence            66666666788888888888877889999999999999999999999999999999998865543

Some of the sequences in this family are annotated as putative membrane proteins.

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=98.52  E-value=2.6e-05  Score=70.84  Aligned_cols=182  Identities=14%  Similarity=0.134  Sum_probs=129.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHHHHhC----C-CCCC-------cchHHHHH
Q 023258           92 GLMCMALSSTIYFFMQVISDVFMVQS---IPLFETVFMRCTVTLILSYLWLRRSG----Q-PIFG-------PMHARNLL  156 (285)
Q Consensus        92 G~l~~l~a~~~~a~~~v~~k~~~~~~---~~p~~~~~~R~~~a~l~l~~~~~~~~----~-~~~~-------~~~~~~~l  156 (285)
                      =++.+++..+.++......|+....+   ..|....+.--++-.++....+.+..    + ....       .++....+
T Consensus        16 k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~   95 (345)
T KOG2234|consen   16 KYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKV   95 (345)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHH
Confidence            35566777788888999999865444   66777777666666555544444331    1 1111       12122333


Q ss_pred             HHHHHHHHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCC
Q 023258          157 VLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGG  236 (285)
Q Consensus       157 ~~~~~~~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~  236 (285)
                      .+=++...+.+.++|.++.+++++.-.+...+-.+.++++..+++++|+++++|.++++.++|+.++-.+....      
T Consensus        96 ~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~------  169 (345)
T KOG2234|consen   96 SVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSP------  169 (345)
T ss_pred             HHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCC------
Confidence            44445556666799999999999999999999999999999999999999999999999999999986332221      


Q ss_pred             CCCCCcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 023258          237 LVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANASDQP  284 (285)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~G~l~~llsa~~~A~~~v~~r~l~~~~~~p  284 (285)
                         .++.  ......+.+.|....+.+.+.-+++.+...++-|..+.+
T Consensus       170 ---~~a~--~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s  212 (345)
T KOG2234|consen  170 ---TGAK--SESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVS  212 (345)
T ss_pred             ---CCcc--CCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCch
Confidence               0000  012245678999999999999999989888888776654

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.40  E-value=9.5e-06  Score=71.86  Aligned_cols=128  Identities=19%  Similarity=0.279  Sum_probs=97.5

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHH
Q 023258           89 RYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLF  168 (285)
Q Consensus        89 ~~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~  168 (285)
                      ..+|+++.+++.+.|..+.++.|.   .+.+++...+-..+...+...++....++..+ .+. .+.-++.|+....+.+
T Consensus       136 ~~kgi~~Ll~stigy~~Y~~~~~~---~~~~~~~~~lPqaiGm~i~a~i~~~~~~~~~~-~k~-~~~nil~G~~w~ignl  210 (269)
T PF06800_consen  136 MKKGILALLISTIGYWIYSVIPKA---FHVSGWSAFLPQAIGMLIGAFIFNLFSKKPFF-EKK-SWKNILTGLIWGIGNL  210 (269)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHh---cCCChhHhHHHHHHHHHHHHHHHhhccccccc-ccc-hHHhhHHHHHHHHHHH
Confidence            477999999999999999999998   46788887776654444433333333322222 233 3456788999999999


Q ss_pred             HHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhh
Q 023258          169 SFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF  224 (285)
Q Consensus       169 ~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~  224 (285)
                      +++.+.+....+.+-.+..+..++..+.+.+++||+=+++++..   .++|+++++
T Consensus       211 ~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~---~~~G~~Liv  263 (269)
T PF06800_consen  211 FYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIY---TLIGLILIV  263 (269)
T ss_pred             HHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHH---HHHHHHHHH
Confidence            99999999999999999999999999999999999999887753   334444443

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=98.37  E-value=5.9e-09  Score=89.99  Aligned_cols=176  Identities=13%  Similarity=0.097  Sum_probs=128.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQSI-PLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLF  168 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~~~-~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~  168 (285)
                      +.|+.++-+-++|-.........+...++ .|..-.|+-+..-+++..++..+|++.   .+..|+..++.++...-+++
T Consensus        17 li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~---~~~~~~hYilla~~DVEaNy   93 (336)
T KOG2766|consen   17 LIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKY---IKAKWRHYILLAFVDVEANY   93 (336)
T ss_pred             hheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHH---HHHHHHHhhheeEEeecccE
Confidence            45665555555555444444444332323 356666777666666666666555422   22234446667777788888


Q ss_pred             HHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCccccccc
Q 023258          169 SFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNV  248 (285)
Q Consensus       169 ~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~  248 (285)
                      +..-|.+|++...+.++-.-....+.+++|+++|-|.++.++.|.+++++|+.+++..+-....              ..
T Consensus        94 ~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd--------------~a  159 (336)
T KOG2766|consen   94 FVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGD--------------RA  159 (336)
T ss_pred             EEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeecccc--------------cc
Confidence            8889999999999999999888899999999999999999999999999999999876654311              22


Q ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 023258          249 RGSDHMLAVLVGLFSSITGGISYCLIKAGANASD  282 (285)
Q Consensus       249 ~~~~~~~G~l~~llsa~~~A~~~v~~r~l~~~~~  282 (285)
                      .+.+..+|+.+.+++|-+||+++++-+.+.|+.|
T Consensus       160 ggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d  193 (336)
T KOG2766|consen  160 GGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNAD  193 (336)
T ss_pred             CCCCCccCcEEEEecceeeeeccccHHHHHhcCc
Confidence            3567889999999999999999999888877654

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=98.35  E-value=1.2e-06  Score=73.24  Aligned_cols=98  Identities=14%  Similarity=0.151  Sum_probs=87.7

Q ss_pred             HHHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCC
Q 023258          162 VGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPG  241 (285)
Q Consensus       162 ~~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~  241 (285)
                      +.....+.|..|++.+++++++.+....--|+.+++|+++|+|+...++++.++++.|+.++...++.+           
T Consensus        62 ~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~-----------  130 (290)
T KOG4314|consen   62 FWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH-----------  130 (290)
T ss_pred             EEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh-----------
Confidence            345678899999999999999999999999999999999999999999999999999999987655442           


Q ss_pred             cccccccCCCchHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 023258          242 EAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGAN  279 (285)
Q Consensus       242 ~~~~~~~~~~~~~~G~l~~llsa~~~A~~~v~~r~l~~  279 (285)
                               .+++.|+.+++.++...|.|-++.|+...
T Consensus       131 ---------a~e~iGi~~AV~SA~~aAlYKV~FK~~iG  159 (290)
T KOG4314|consen  131 ---------ADEIIGIACAVGSAFMAALYKVLFKMFIG  159 (290)
T ss_pred             ---------hhhhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence                     56899999999999999999999987543

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=98.32  E-value=2.7e-05  Score=70.62  Aligned_cols=135  Identities=19%  Similarity=0.250  Sum_probs=113.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHHH--hCCCCC------CcchHHHHHHHHHHH
Q 023258           92 GLMCMALSSTIYFFMQVISDVFM-VQSIPLFETVFMRCTVTLILSYLWLRR--SGQPIF------GPMHARNLLVLRALV  162 (285)
Q Consensus        92 G~l~~l~a~~~~a~~~v~~k~~~-~~~~~p~~~~~~R~~~a~l~l~~~~~~--~~~~~~------~~~~~~~~l~~~~~~  162 (285)
                      |+++.+++.++-++..+..+... ..+.++.+++++-..++.++.++....  .+....      ..+..+..+++..++
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~  234 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT  234 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence            99999999999999999998765 348899999999999988877666555  322111      133456677788888


Q ss_pred             HHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhcc
Q 023258          163 GFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRR  226 (285)
Q Consensus       163 ~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~  226 (285)
                      +.+++.+.++.+++.++-..+++..+--+++.+++.++++++++..+|+|+++.+.|+.+=...
T Consensus       235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~  298 (303)
T PF08449_consen  235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYA  298 (303)
T ss_pred             HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHh
Confidence            8999999999999999999999999999999999999999999999999999999999876543

; GO: 0055085 transmembrane transport

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=98.32  E-value=2.2e-06  Score=77.71  Aligned_cols=150  Identities=13%  Similarity=0.040  Sum_probs=119.5

Q ss_pred             HHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCC--cchHHHHHHHHHHHHHHHHHHHHHHHhccchhHHH
Q 023258          108 VISDVFMV--QSIPLFETVFMRCTVTLILSYLWLRRSGQPIFG--PMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQAT  183 (285)
Q Consensus       108 v~~k~~~~--~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~l~~~~~~~al~~~~~~~a~  183 (285)
                      ...|+.+.  .---|..++.+++..+.+.++.....+-.+...  .+..+..++..+++.+++.++-..++.+.|++...
T Consensus        34 ~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q  113 (316)
T KOG1441|consen   34 ILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQ  113 (316)
T ss_pred             EeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcchhhhccchhHHH
Confidence            34477663  334477777776666666655544333222222  44567778888999999999999999999999999


Q ss_pred             HHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCcccccccCCCchHHHHHHHHHH
Q 023258          184 VLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFS  263 (285)
Q Consensus       184 ~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~lls  263 (285)
                      ++-.+.|++++++++++.+|+.++..++.++.+..||.+....+.                      .-+++|.+.++.+
T Consensus       114 ~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~----------------------~fn~~G~i~a~~s  171 (316)
T KOG1441|consen  114 TIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL----------------------SFNLFGFISAMIS  171 (316)
T ss_pred             HHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc----------------------cccHHHHHHHHHH
Confidence            999999999999999999999999999999999999988776433                      3478999999999


Q ss_pred             HHHHHHHHHHHHhhcc
Q 023258          264 SITGGISYCLIKAGAN  279 (285)
Q Consensus       264 a~~~A~~~v~~r~l~~  279 (285)
                      -+..+..+++.+++-+
T Consensus       172 ~~~~al~~I~~~~ll~  187 (316)
T KOG1441|consen  172 NLAFALRNILSKKLLT  187 (316)
T ss_pred             HHHHHHHHHHHHHhhh
Confidence            9999999999998764

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.24  E-value=4.2e-05  Score=67.80  Aligned_cols=145  Identities=14%  Similarity=0.040  Sum_probs=102.4

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHh-hHHHHHHHHH
Q 023258          119 PLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSF-TAPIMASIAA  197 (285)
Q Consensus       119 ~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~al~~~~~~~a~~l~~-~~Pl~~~ll~  197 (285)
                      +|.+-.+--.+.+.++-+......+.....+...+...++.|++..+++..+|.++++++++.+..+.. ++-+.+.+++
T Consensus        11 ~~~~Q~lG~t~Gali~alv~~~~~~p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~g   90 (269)
T PF06800_consen   11 KPANQILGTTIGALIFALVVFLFRQPAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIG   90 (269)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHH
Confidence            444444433333444433333343332221235677888999999999999999999999999999975 6667799999


Q ss_pred             HHHhcCcCcHHHHH----HHHHHHHHHHHhhccccccccccCCCCCCCcccccccCCCchHHHHHHHHHHHHHHHHHHHH
Q 023258          198 RIILREKLKIAEIG----GLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCL  273 (285)
Q Consensus       198 ~~~l~e~~~~~~~i----g~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~llsa~~~A~~~v~  273 (285)
                      .++|+|.-+..+++    +++++++|+++-...+.....              .....+...|++..+++.+.|-.|.++
T Consensus        91 v~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~--------------~~~~~~~~kgi~~Ll~stigy~~Y~~~  156 (269)
T PF06800_consen   91 VLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDK--------------SSSKSNMKKGILALLISTIGYWIYSVI  156 (269)
T ss_pred             HhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccc--------------cccccchhhHHHHHHHHHHHHHHHHHH
Confidence            99999988876654    777788888877665543210              011345678999999999999999888


Q ss_pred             HHhh
Q 023258          274 IKAG  277 (285)
Q Consensus       274 ~r~l  277 (285)
                      .|..
T Consensus       157 ~~~~  160 (269)
T PF06800_consen  157 PKAF  160 (269)
T ss_pred             HHhc
Confidence            7753

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=98.24  E-value=6.1e-05  Score=60.50  Aligned_cols=129  Identities=19%  Similarity=0.283  Sum_probs=96.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCC-HHHHHHHHHHHHHHHHHHHHHHhCC-CCCCcchHHHHHHHHHHHHHHHHHHH
Q 023258           93 LMCMALSSTIYFFMQVISDVFMVQSIP-LFETVFMRCTVTLILSYLWLRRSGQ-PIFGPMHARNLLVLRALVGFLSLFSF  170 (285)
Q Consensus        93 ~l~~l~a~~~~a~~~v~~k~~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~l~~~~~  170 (285)
                      +++++++..+-+....+.-.+. +..+ |+...++-+..+.+++..+....++ .....++..++.+++|+++.....+.
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~-~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~lGG~lG~~~V~~~   81 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLG-KALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYLGGLLGVFFVLSN   81 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhccHHHHHHHHHHH
Confidence            4567777777777777765554 4454 9999999999998887776655443 22223334456677999999999999


Q ss_pred             HHHHhccchhHHHHHHhhHHHHHHH-HHHH----HhcCcCcHHHHHHHHHHHHHHHH
Q 023258          171 VYSIQRLPLSQATVLSFTAPIMASI-AARI----ILREKLKIAEIGGLALSFFGVLF  222 (285)
Q Consensus       171 ~~al~~~~~~~a~~l~~~~Pl~~~l-l~~~----~l~e~~~~~~~ig~~l~l~Gv~l  222 (285)
                      .+.+.+++++.++.+.-+.-+++.+ +..+    .-+++++..+++|+++.++|+++
T Consensus        82 ~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   82 IILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            9999999999988887766655554 4443    35789999999999999999874

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.21  E-value=0.0001  Score=67.84  Aligned_cols=172  Identities=10%  Similarity=-0.005  Sum_probs=116.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHH-HHHHHHHHHH---HHHHHhC---CCCCCcchHHHHHHHHHH
Q 023258           89 RYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFM-RCTVTLILSY---LWLRRSG---QPIFGPMHARNLLVLRAL  161 (285)
Q Consensus        89 ~~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~-R~~~a~l~l~---~~~~~~~---~~~~~~~~~~~~l~~~~~  161 (285)
                      ...|+++.+++++||+...+-.|..  +..+ +|.-+. -.+++.++..   .....+.   .-...+...+...++.|+
T Consensus         5 ~~~G~~~~~i~~~~~GS~~~p~K~~--k~w~-wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~   81 (345)
T PRK13499          5 IILGIIWHLIGGASSGSFYAPFKKV--KKWS-WETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGA   81 (345)
T ss_pred             hHHHHHHHHHHHHHhhccccccccc--CCCc-hhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHH
Confidence            4679999999999999999999983  3333 222221 1112222211   1111110   001123445677888999


Q ss_pred             HHHHHHHHHHHHHhccchhHHHHHH-hhHHHHHHHHHHHHhcCcC-------cHHHHHHHHHHHHHHHHhhccccccccc
Q 023258          162 VGFLSLFSFVYSIQRLPLSQATVLS-FTAPIMASIAARIILREKL-------KIAEIGGLALSFFGVLFIFRRILTTQAV  233 (285)
Q Consensus       162 ~~~l~~~~~~~al~~~~~~~a~~l~-~~~Pl~~~ll~~~~l~e~~-------~~~~~ig~~l~l~Gv~li~~~~~~~~~~  233 (285)
                      +-.+++..++.++++++.+.+..+. .+.-++..++..++++|-.       ...-++|++++++|+.+....+...+. 
T Consensus        82 ~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~-  160 (345)
T PRK13499         82 LWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKER-  160 (345)
T ss_pred             HHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhccc-
Confidence            9999999999999999999998875 5888999999999998754       245778889999999998875443211 


Q ss_pred             cCCCCCCCcccccccCCCchHHHHHHHHHHHHHHHHHHH
Q 023258          234 SGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYC  272 (285)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~G~l~~llsa~~~A~~~v  272 (285)
                             ++.++ +....+...|+++++++++.+++++.
T Consensus       161 -------~~~~~-~~~~~~~~KGi~ialisgi~~~~f~~  191 (345)
T PRK13499        161 -------KMGIK-KAEEFNLKKGLILAVMSGIFSACFSF  191 (345)
T ss_pred             -------ccccc-cccccchHhHHHHHHHHHHHHHHHHH
Confidence                   00000 01235678999999999999999994

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.21  E-value=0.00013  Score=64.65  Aligned_cols=128  Identities=16%  Similarity=0.208  Sum_probs=103.9

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCC----CCcchHHHHHHHHHHHHHHHHHHHHH
Q 023258           97 ALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPI----FGPMHARNLLVLRALVGFLSLFSFVY  172 (285)
Q Consensus        97 l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~l~~~~~~~  172 (285)
                      +.-++.|+++..+-|.   -++++.+-...-++.-.+..+.+........    ......+.++++.|....+...+|..
T Consensus       154 l~la~sf~~Ygl~RK~---~~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL~lf~~  230 (293)
T COG2962         154 LALALSFGLYGLLRKK---LKVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPLLLFAA  230 (293)
T ss_pred             HHHHHHHHHHHHHHHh---cCCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHHHHHHH
Confidence            3445668888888777   4688888888777776665555544433222    13455678889999999999999999


Q ss_pred             HHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccc
Q 023258          173 SIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRI  227 (285)
Q Consensus       173 al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~  227 (285)
                      |-+++|.+...+++|..|.+..+++.++++|+++..++++-+++-+|+.+....+
T Consensus       231 aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~  285 (293)
T COG2962         231 AAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG  285 (293)
T ss_pred             HHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999998876544

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=98.19  E-value=8e-05  Score=57.38  Aligned_cols=69  Identities=20%  Similarity=0.229  Sum_probs=60.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhccchhHHHHH-HhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhc
Q 023258          157 VLRALVGFLSLFSFVYSIQRLPLSQATVL-SFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR  225 (285)
Q Consensus       157 ~~~~~~~~l~~~~~~~al~~~~~~~a~~l-~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~  225 (285)
                      +...++..+++.++..+++++|.+.|-.+ ..+.-+.+++++++++||++++.+++|+.++++|++++-.
T Consensus        34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            44556667888888999999999999666 6699999999999999999999999999999999999853

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=98.19  E-value=7.8e-05  Score=57.25  Aligned_cols=68  Identities=18%  Similarity=0.185  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhHH-HHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHh
Q 023258          156 LVLRALVGFLSLFSFVYSIQRLPLSQA-TVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFI  223 (285)
Q Consensus       156 l~~~~~~~~l~~~~~~~al~~~~~~~a-~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li  223 (285)
                      .+...++..+++++...+++++|.+.+ ++...+.-+.+.+++++++||++++.+++|+.++++|+.++
T Consensus        38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            444566667888889999999999998 45566999999999999999999999999999999999886

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.15  E-value=0.00026  Score=63.53  Aligned_cols=166  Identities=11%  Similarity=0.092  Sum_probs=116.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcC-CCC-HHHHHHHHHHHHHHHHHHHHHHhCCC-CCCcchHHHHHHHHHHHHHHHHHH
Q 023258           93 LMCMALSSTIYFFMQVISDVFMVQ-SIP-LFETVFMRCTVTLILSYLWLRRSGQP-IFGPMHARNLLVLRALVGFLSLFS  169 (285)
Q Consensus        93 ~l~~l~a~~~~a~~~v~~k~~~~~-~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~l~~~~  169 (285)
                      +..++.-+++-..+.+.-|++... +.+ .+.+..++.+...+.++..-+.+-.. +..+++..+.++-..+...+..+.
T Consensus        14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t   93 (314)
T KOG1444|consen   14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFT   93 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHH
Confidence            333444444444455566776533 222 33333477777666655443322111 112333444455556666666666


Q ss_pred             HHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCcccccccC
Q 023258          170 FVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVR  249 (285)
Q Consensus       170 ~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (285)
                      -..+++++++..-+++-+..|+++++...+++|.++++..|.++....+|......++..+                   
T Consensus        94 ~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf-------------------  154 (314)
T KOG1444|consen   94 GSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSF-------------------  154 (314)
T ss_pred             ccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccccee-------------------
Confidence            7789999999999999999999999999999999999999999999999998887776654                   


Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 023258          250 GSDHMLAVLVGLFSSITGGISYCLIKAGANA  280 (285)
Q Consensus       250 ~~~~~~G~l~~llsa~~~A~~~v~~r~l~~~  280 (285)
                         +..|+.+++..-++-+.+.+..|+..+.
T Consensus       155 ---~~~gY~w~~~n~~~~a~~~v~~kk~vd~  182 (314)
T KOG1444|consen  155 ---NLRGYSWALANCLTTAAFVVYVKKSVDS  182 (314)
T ss_pred             ---cchhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence               3358999999999999999999976553

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=98.13  E-value=2.8e-05  Score=60.78  Aligned_cols=69  Identities=19%  Similarity=0.336  Sum_probs=61.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhccchhHHHHH-HhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhc
Q 023258          157 VLRALVGFLSLFSFVYSIQRLPLSQATVL-SFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR  225 (285)
Q Consensus       157 ~~~~~~~~l~~~~~~~al~~~~~~~a~~l-~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~  225 (285)
                      ++..++..++++++..+++++|.+.|-.+ ..+.-+.++++++++++|+++..+++|+.++++|++++-.
T Consensus        34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l  103 (120)
T PRK10452         34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS  103 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence            45566677889999999999999999766 4699999999999999999999999999999999988744

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=98.12  E-value=2.7e-05  Score=59.04  Aligned_cols=71  Identities=20%  Similarity=0.279  Sum_probs=62.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccchhHH-HHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhc
Q 023258          155 LLVLRALVGFLSLFSFVYSIQRLPLSQA-TVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR  225 (285)
Q Consensus       155 ~l~~~~~~~~l~~~~~~~al~~~~~~~a-~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~  225 (285)
                      ..++..++..+++.++-.|++++|.+.| ++......+.+++.++++++|+++..+++++.++++|+..+-.
T Consensus        32 ~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          32 PSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            3455666777888999999999999998 5557799999999999999999999999999999999988743

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.07  E-value=4.5e-05  Score=69.20  Aligned_cols=120  Identities=21%  Similarity=0.190  Sum_probs=87.3

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHH-HHHHHHHHHH
Q 023258           87 GSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNL-LVLRALVGFL  165 (285)
Q Consensus        87 ~~~~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~l  165 (285)
                      .+...|++++++++++.+....+.|....+ .+.   ...|              .+...  ....... ++.+.+...+
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~---~~~~--------------~~~~~--~~~l~~~~W~~G~~~~~~   62 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR---GSLR--------------AGSGG--RSYLRRPLWWIGLLLMVL   62 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc---cccc--------------ccchh--hHHHhhHHHHHHHHHHhc
Confidence            345789999999999999999999885311 000   0000              00000  0111111 2222334467


Q ss_pred             HHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhcc
Q 023258          166 SLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRR  226 (285)
Q Consensus       166 ~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~  226 (285)
                      +..+-+.|+.+.|.+..+.+..+.-++.++++.+++|||+++++++|..++++|+.+++.-
T Consensus        63 g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~  123 (300)
T PF05653_consen   63 GEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIF  123 (300)
T ss_pred             chHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEe
Confidence            7788889999999999999999999999999999999999999999999999999887643

>PRK11431 multidrug efflux system protein; Provisional

Probab=98.05  E-value=5.8e-05  Score=57.61  Aligned_cols=69  Identities=20%  Similarity=0.274  Sum_probs=60.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhHHH-HHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhh
Q 023258          156 LVLRALVGFLSLFSFVYSIQRLPLSQAT-VLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF  224 (285)
Q Consensus       156 l~~~~~~~~l~~~~~~~al~~~~~~~a~-~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~  224 (285)
                      .+...++...++++...+++++|.+.+- +...+.-+.+.+++++++||+++..+++|+.++++|+..+-
T Consensus        32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            3444666678888999999999999984 45669999999999999999999999999999999999873

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=98.04  E-value=1.6e-05  Score=61.19  Aligned_cols=109  Identities=12%  Similarity=0.087  Sum_probs=77.8

Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 023258           98 LSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRL  177 (285)
Q Consensus        98 ~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~al~~~  177 (285)
                      +.+++||+.+.+.|... .+.++..-.. |..-....+     .+         .++ ..+.-+....+...||+.+.+.
T Consensus         3 ~Vg~~WG~Tnpfik~g~-~~~~~~~~~~-~~~~~~~~L-----l~---------n~~-y~ipf~lNq~GSv~f~~~L~~~   65 (113)
T PF10639_consen    3 LVGILWGCTNPFIKRGS-SGLEKVKASL-QLLQEIKFL-----LL---------NPK-YIIPFLLNQSGSVLFFLLLGSA   65 (113)
T ss_pred             eehHHhcCchHHHHHHH-hhcCCccchH-HHHHHHHHH-----HH---------hHH-HHHHHHHHHHHHHHHHHHHhcC
Confidence            45788999999999976 3333332221 322111110     00         122 2334455567888999999999


Q ss_pred             chhHHHHHH-hhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHh
Q 023258          178 PLSQATVLS-FTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFI  223 (285)
Q Consensus       178 ~~~~a~~l~-~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li  223 (285)
                      +.+.+..+. ++.-+++++.++++.+|..+++.++|++++++|+.+.
T Consensus        66 dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   66 DLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             CceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            999999995 7889999999999888888999999999999999764

Many members are annotated as potential transmembrane proteins.

>TIGR00688 rarD rarD protein

Probab=98.02  E-value=0.00017  Score=63.68  Aligned_cols=104  Identities=17%  Similarity=0.242  Sum_probs=68.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCC---CCCcchHHHHHHHHHHHHHHHHHHH
Q 023258           94 MCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQP---IFGPMHARNLLVLRALVGFLSLFSF  170 (285)
Q Consensus        94 l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~l~~~~~  170 (285)
                      +++++++++|+.+.+..|... . .+......... ....+..+........   .......|..++..+++..+++.++
T Consensus       149 ~~~l~aa~~~a~~~i~~~~~~-~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~i~~~l~  225 (256)
T TIGR00688       149 WEALVLAFSFTAYGLIRKALK-N-TDLAGFCLETL-SLMPVAIYYLLQTDFATVQQTNPFPIWLLLVLAGLITGTPLLAF  225 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhcC-C-CCcchHHHHHH-HHHHHHHHHHHHhccCcccccCchhHHHHHHHHHHHHHHHHHHH
Confidence            367889999999999998854 2 23333222211 1111221111111111   1112234566666777788999999


Q ss_pred             HHHHhccchhHHHHHHhhHHHHHHHHHHHH
Q 023258          171 VYSIQRLPLSQATVLSFTAPIMASIAARII  200 (285)
Q Consensus       171 ~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~  200 (285)
                      ++++++.|++.++++.++.|+++++++.++
T Consensus       226 ~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       226 VIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999874

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=97.96  E-value=0.00034  Score=61.76  Aligned_cols=116  Identities=12%  Similarity=0.062  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccc
Q 023258          154 NLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAV  233 (285)
Q Consensus       154 ~~l~~~~~~~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~  233 (285)
                      ...+.-+++...+..+.|.++.+++++.-..+....-+|+.+++.-+++++++.++|+|+....+|+.++...+..... 
T Consensus        87 ~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~-  165 (372)
T KOG3912|consen   87 VLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVT-  165 (372)
T ss_pred             ceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeeccccc-
Confidence            3455578888999999999999999999999999999999999999999999999999999999999988665432110 


Q ss_pred             cCCCCCCCcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 023258          234 SGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANAS  281 (285)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~G~l~~llsa~~~A~~~v~~r~l~~~~  281 (285)
                       ...+          .-+..+.|+++.+++-+.-|+.+++-+|.-++.
T Consensus       166 -~p~~----------d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~  202 (372)
T KOG3912|consen  166 -DPYT----------DYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKS  202 (372)
T ss_pred             -CCcc----------ccccchhhhHHHHHHHHHHHHHHHHHHhhhhhc
Confidence             0000          113467899999999999999999988755443

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=97.87  E-value=1e-05  Score=70.67  Aligned_cols=135  Identities=13%  Similarity=0.102  Sum_probs=106.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCC-CCCCcchHHHHHHHHHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQ-PIFGPMHARNLLVLRALVGFLSLF  168 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~l~~~  168 (285)
                      ..|...++.+++.-+...++.|+.. .+.+....+.+-.+++.+..++.+..-+. ..+..+++|++++..|++++++++
T Consensus       190 ~~gt~aai~s~lf~asvyIilR~iG-k~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~cgkdr~l~~~lGvfgfigQI  268 (346)
T KOG4510|consen  190 IPGTVAAISSVLFGASVYIILRYIG-KNAHAIMSVSYFSLITLVVSLIGCASIGAVQLPHCGKDRWLFVNLGVFGFIGQI  268 (346)
T ss_pred             CCchHHHHHhHhhhhhHHHHHHHhh-ccccEEEEehHHHHHHHHHHHHHHhhccceecCccccceEEEEEehhhhhHHHH
Confidence            4578888888888888888889975 66666665666556655554444332222 223344567778889999999999


Q ss_pred             HHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhc
Q 023258          169 SFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR  225 (285)
Q Consensus       169 ~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~  225 (285)
                      +...+++.-.++.+++..++.-+++.+.-.+++++.|+++.|.|+++++...+.+..
T Consensus       269 llTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~  325 (346)
T KOG4510|consen  269 LLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVAL  325 (346)
T ss_pred             HHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHH
Confidence            999999999999999999999999999999999999999999999988877666553

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=97.70  E-value=0.00071  Score=60.35  Aligned_cols=136  Identities=15%  Similarity=0.160  Sum_probs=113.7

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC------CcchHHHHHHHHHH
Q 023258           89 RYSGLMCMALSSTIYFFMQVISDVFMV-QSIPLFETVFMRCTVTLILSYLWLRRSGQPIF------GPMHARNLLVLRAL  161 (285)
Q Consensus        89 ~~~G~l~~l~a~~~~a~~~v~~k~~~~-~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~------~~~~~~~~l~~~~~  161 (285)
                      ...|++++...-++=|+.+...+.+.. ..++++.+++.-.++..+.-.......+....      ..++.++-+++...
T Consensus       170 s~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~  249 (327)
T KOG1581|consen  170 SPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST  249 (327)
T ss_pred             chHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH
Confidence            468999999888888888887766543 47999999999988888776665444443221      25567888999999


Q ss_pred             HHHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhh
Q 023258          162 VGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF  224 (285)
Q Consensus       162 ~~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~  224 (285)
                      ++..++.+.|+-++.-++-.-++++.+--++..++++++++.+++..+|+|+.+.+.|+.+=.
T Consensus       250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~  312 (327)
T KOG1581|consen  250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEI  312 (327)
T ss_pred             hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHH
Confidence            999999999999999888888999999999999999999999999999999999999998743

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=97.65  E-value=0.00024  Score=63.33  Aligned_cols=141  Identities=14%  Similarity=0.092  Sum_probs=105.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCC------CCCcchHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHhhHHHHH
Q 023258          120 LFETVFMRCTVTLILSYLWLRRSGQP------IFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMA  193 (285)
Q Consensus       120 p~~~~~~R~~~a~l~l~~~~~~~~~~------~~~~~~~~~~l~~~~~~~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~  193 (285)
                      |+.++.+.+++-.++.....+..+.+      ....+...+.+.-.+++..+...+-.+++++++.+.-+..-+..++|+
T Consensus        45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FI  124 (349)
T KOG1443|consen   45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFI  124 (349)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHH
Confidence            77788777777666554443332221      122334455666788888888889999999999999999999999999


Q ss_pred             HHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCcccccccCCCchHHHHHHHHHHHHHHHHHHHH
Q 023258          194 SIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCL  273 (285)
Q Consensus       194 ~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~llsa~~~A~~~v~  273 (285)
                      .+++.++.=||+++.-..-..++.+|+++....+..+                      +..|..+.+.++++-++-+.+
T Consensus       125 llFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf----------------------~i~Gf~lv~~aS~~sGlRW~~  182 (349)
T KOG1443|consen  125 LLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQF----------------------NIEGFFLVLAASLLSGLRWAF  182 (349)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccce----------------------eehhHHHHHHHHHhhhhhHHH
Confidence            9999998889999999999999999999987665443                      456777777777776666666


Q ss_pred             HHhhcccCC
Q 023258          274 IKAGANASD  282 (285)
Q Consensus       274 ~r~l~~~~~  282 (285)
                      .+.+.++.+
T Consensus       183 tQ~ll~~~~  191 (349)
T KOG1443|consen  183 TQMLLRNQP  191 (349)
T ss_pred             HHHHHhcCc
Confidence            665554443

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=97.64  E-value=0.00081  Score=50.19  Aligned_cols=59  Identities=20%  Similarity=0.275  Sum_probs=35.8

Q ss_pred             HHHHHHHHHHHHHHHHHhccchhHHHHH-HhhHHHHHHHHHHHHhcCcCcHHHHHHHHHH
Q 023258          158 LRALVGFLSLFSFVYSIQRLPLSQATVL-SFTAPIMASIAARIILREKLKIAEIGGLALS  216 (285)
Q Consensus       158 ~~~~~~~l~~~~~~~al~~~~~~~a~~l-~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~  216 (285)
                      ....+..++++++..+++++|.+.+-.+ ..+..+.+.+++.+++||+++..+++|+.++
T Consensus        34 ~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   34 LAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            3444667888899999999999999555 5699999999999999999999999998764

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=97.52  E-value=0.00039  Score=63.20  Aligned_cols=136  Identities=16%  Similarity=0.260  Sum_probs=106.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHH-HHHHHhCC-CC------CCcchHHHHHH
Q 023258           89 RYSGLMCMALSSTIYFFMQVISDVFM---VQSIPLFETVFMRCTVTLILSY-LWLRRSGQ-PI------FGPMHARNLLV  157 (285)
Q Consensus        89 ~~~G~l~~l~a~~~~a~~~v~~k~~~---~~~~~p~~~~~~R~~~a~l~l~-~~~~~~~~-~~------~~~~~~~~~l~  157 (285)
                      +..|.+.++++.+..+...++.|...   ..+++++.+..+-.-++.+.++ |+...... ..      ....... .++
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~-~~~  239 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFL-ILL  239 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhH-HHH
Confidence            47899999999999999999999876   2469999999988888887777 76543221 11      1111122 223


Q ss_pred             HHHHHHHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhc
Q 023258          158 LRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR  225 (285)
Q Consensus       158 ~~~~~~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~  225 (285)
                      +..++.++.+...|..+.++++-.=.+....=-+++.+.++++++++++....+|.+++++|+++=..
T Consensus       240 ~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  240 LNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR  307 (316)
T ss_pred             HHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence            33367777888889999999998888888777788889999999999999999999999999988543

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=97.44  E-value=0.0016  Score=59.67  Aligned_cols=139  Identities=16%  Similarity=0.069  Sum_probs=101.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHH---HhCCCCC---CcchHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQ---SIPLFETVFMRCTVTLILSYLWLR---RSGQPIF---GPMHARNLLVLRA  160 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~---~~~p~~~~~~R~~~a~l~l~~~~~---~~~~~~~---~~~~~~~~l~~~~  160 (285)
                      ..|.+++++++++||.+.++.|.-...   .+|--.+..+-.++..++++|.++   +.+...+   ...+ ...++..+
T Consensus       246 llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q-~~~vv~~~  324 (416)
T KOG2765|consen  246 LLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQ-FSLVVFNN  324 (416)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCce-eEeeeHhh
Confidence            689999999999999999999885422   233333333344555555554332   2222222   2222 33334444


Q ss_pred             H-HHHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccc
Q 023258          161 L-VGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILT  229 (285)
Q Consensus       161 ~-~~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~  229 (285)
                      + ..+++-++|..|.-.+++-.+++-+.++.-.+++.-.++.+.+++...++|.+.+++|-+++...+..
T Consensus       325 ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~  394 (416)
T KOG2765|consen  325 LIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSEN  394 (416)
T ss_pred             HHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccccc
Confidence            4 44788999999999999999999999888889999999889999999999999999999998766543

>TIGR00803 nst UDP-galactose transporter

Probab=97.40  E-value=0.0013  Score=56.78  Aligned_cols=133  Identities=14%  Similarity=0.116  Sum_probs=85.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHH-HHHHHHHHHHHHHhCCC-C--CC-cchHHHHHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRC-TVTLILSYLWLRRSGQP-I--FG-PMHARNLLVLRALVGF  164 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~-~~a~l~l~~~~~~~~~~-~--~~-~~~~~~~l~~~~~~~~  164 (285)
                      ..|..+.+.+.++-++..+..++.....-..+..-.+.. ++..+............ .  .. ..+.....+...+...
T Consensus        84 ~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  163 (222)
T TIGR00803        84 VVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLLNV  163 (222)
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHHHH
Confidence            567777777888878888888775422211111111111 11111111111111110 0  00 1111233444556667


Q ss_pred             HHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHH
Q 023258          165 LSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLF  222 (285)
Q Consensus       165 l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~l  222 (285)
                      .+..+..+.+++.+...-++...+.++++.++++++++++++..+|+|+.+++.|+++
T Consensus       164 ~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       164 GGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             hcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            7778889999999999999999999999999999999999999999999999988754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.33  E-value=0.014  Score=53.91  Aligned_cols=138  Identities=9%  Similarity=0.026  Sum_probs=88.3

Q ss_pred             CchHHHHHHHHHHHHHHHHH-------HHHHHhhcCCCCHHHHHHHHHH---HHHHHH-HHHHH---HhCCCC--CC---
Q 023258           88 SRYSGLMCMALSSTIYFFMQ-------VISDVFMVQSIPLFETVFMRCT---VTLILS-YLWLR---RSGQPI--FG---  148 (285)
Q Consensus        88 ~~~~G~l~~l~a~~~~a~~~-------v~~k~~~~~~~~p~~~~~~R~~---~a~l~l-~~~~~---~~~~~~--~~---  148 (285)
                      +..+|++.++++.+.++++.       +..+.....+.++.....-.++   ++.++. .+++.   .+++..  ..   
T Consensus       171 ~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~  250 (345)
T PRK13499        171 NLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFS  250 (345)
T ss_pred             chHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhcc
Confidence            34789999999999999999       5554432245666665555554   333333 22222   122221  11   


Q ss_pred             -cchHHH----HHHHHHHHHHHHHHHHHHHHhccchhHHHH---HH-hhHHHHHHHHHHHHhcCcCc------HHHHHHH
Q 023258          149 -PMHARN----LLVLRALVGFLSLFSFVYSIQRLPLSQATV---LS-FTAPIMASIAARIILREKLK------IAEIGGL  213 (285)
Q Consensus       149 -~~~~~~----~l~~~~~~~~l~~~~~~~al~~~~~~~a~~---l~-~~~Pl~~~ll~~~~l~e~~~------~~~~ig~  213 (285)
                       +++.+.    ...+.|+.-.+++.++..+-...+.+.+.+   +. .+.-++..+-+. ++||+=+      +.-++|+
T Consensus       251 ~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~  329 (345)
T PRK13499        251 LAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGC  329 (345)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHH
Confidence             111122    336667777888888888888887666555   66 566677777777 5998866      5667888


Q ss_pred             HHHHHHHHHhhcc
Q 023258          214 ALSFFGVLFIFRR  226 (285)
Q Consensus       214 ~l~l~Gv~li~~~  226 (285)
                      ++.++|..++..+
T Consensus       330 vliI~g~~lig~~  342 (345)
T PRK13499        330 VVIILAANIVGLG  342 (345)
T ss_pred             HHHHHHHHHHhhc
Confidence            8888888887643

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.32  E-value=0.019  Score=46.43  Aligned_cols=135  Identities=17%  Similarity=0.150  Sum_probs=90.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCC-CCCC-cchHHHHHHHHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQ-PIFG-PMHARNLLVLRALVGFLSL  167 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~-~~~~-~~~~~~~l~~~~~~~~l~~  167 (285)
                      ...+++++++..+-.....+.-.+....-+|+.-.++-+..+.+++..+...+.+ +... ..+..++.+++|+++.+..
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~v   83 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFV   83 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhh
Confidence            4466777777777777776665544223358888888888877766665554322 2221 2333456677888887777


Q ss_pred             HHHHHHHhccchhHHHHH-HhhHHHHHHHHHHHHh----cCcCcHHHHHHHHHHHHHHHHhh
Q 023258          168 FSFVYSIQRLPLSQATVL-SFTAPIMASIAARIIL----REKLKIAEIGGLALSFFGVLFIF  224 (285)
Q Consensus       168 ~~~~~al~~~~~~~a~~l-~~~~Pl~~~ll~~~~l----~e~~~~~~~ig~~l~l~Gv~li~  224 (285)
                      ..-.....++.++....+ ..-+-++..++..+=+    +++++..+++|+++.++|++++-
T Consensus        84 t~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          84 TSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             hhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            777777888888776555 4555566666665543    47899999999999999955543

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.26  E-value=1.6e-05  Score=68.72  Aligned_cols=165  Identities=12%  Similarity=0.036  Sum_probs=111.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 023258           92 GLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFV  171 (285)
Q Consensus        92 G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~  171 (285)
                      .++.+++-++.|+........   -+-+|.+-+.---+-+.++.+..++..  .+..+...+...++.|++..+++..++
T Consensus         3 ~~liaL~P~l~WGsip~v~~k---~GG~p~qQ~lGtT~GALifaiiv~~~~--~p~~T~~~~iv~~isG~~Ws~GQ~~Qf   77 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANK---FGGKPYQQTLGTTLGALIFAIIVFLFV--SPELTLTIFIVGFISGAFWSFGQANQF   77 (288)
T ss_pred             hHHHHHHHHHHhcccceeeee---cCCChhHhhhhccHHHHHHHHHHheee--cCccchhhHHHHHHhhhHhhhhhhhhh
Confidence            678899999999999888644   245677766555555555544444442  233355566777888999999999999


Q ss_pred             HHHhccchhHHHHHHh-hHHHHHHHHHHHHhcCcCcHHHH----HHHHHHHHHHHHhhccccccccccCCCCCCCccccc
Q 023258          172 YSIQRLPLSQATVLSF-TAPIMASIAARIILREKLKIAEI----GGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISL  246 (285)
Q Consensus       172 ~al~~~~~~~a~~l~~-~~Pl~~~ll~~~~l~e~~~~~~~----ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~  246 (285)
                      -|+++.+++.+..+.. ++-+-+.+++.+.++|..+..+.    ++++++++|+++-...+...          .+    
T Consensus        78 ka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~n----------k~----  143 (288)
T COG4975          78 KAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNN----------KE----  143 (288)
T ss_pred             hheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccc----------cc----
Confidence            9999999999999975 77788999999999998887654    34555556665544333211          11    


Q ss_pred             ccCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 023258          247 NVRGSDHMLAVLVGLFSSITGGISYCLIK  275 (285)
Q Consensus       247 ~~~~~~~~~G~l~~llsa~~~A~~~v~~r  275 (285)
                      ..+..+.-.|+...+.+.+.|-.|.++.+
T Consensus       144 ~~~~~n~kkgi~~L~iSt~GYv~yvvl~~  172 (288)
T COG4975         144 EENPSNLKKGIVILLISTLGYVGYVVLFQ  172 (288)
T ss_pred             ccChHhhhhheeeeeeeccceeeeEeeec
Confidence            11223345666666666666655555444

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=97.17  E-value=0.024  Score=51.78  Aligned_cols=174  Identities=9%  Similarity=0.035  Sum_probs=116.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHH--HhCCC-----CCCcchHHHHHHHHHH
Q 023258           89 RYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLR--RSGQP-----IFGPMHARNLLVLRAL  161 (285)
Q Consensus        89 ~~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~--~~~~~-----~~~~~~~~~~l~~~~~  161 (285)
                      -..|+++..+++++-+...+-.|..  ++.+--..=....+++.+++ |+..  ..-+.     ...+...+...++.|+
T Consensus         5 ii~Gii~h~iGg~~~~sfy~P~kkv--k~WsWEs~Wlv~gi~swli~-P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~   81 (344)
T PF06379_consen    5 IILGIIFHAIGGFASGSFYVPFKKV--KGWSWESYWLVQGIFSWLIV-PWLWALLAIPDFFSIYSATPASTLFWTFLFGV   81 (344)
T ss_pred             HHHHHHHHHHHHHHhhhhccchhhc--CCccHHHHHHHHHHHHHHHH-HHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence            3679999999999999999999884  44443333233344444333 3221  11111     1113345666777888


Q ss_pred             HHHHHHHHHHHHHhccchhHHHH-HHhhHHHHHHHHHHHHhc-------CcCcHHHHHHHHHHHHHHHHhhccccccccc
Q 023258          162 VGFLSLFSFVYSIQRLPLSQATV-LSFTAPIMASIAARIILR-------EKLKIAEIGGLALSFFGVLFIFRRILTTQAV  233 (285)
Q Consensus       162 ~~~l~~~~~~~al~~~~~~~a~~-l~~~~Pl~~~ll~~~~l~-------e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~  233 (285)
                      .-.++.+.|=.+++|+..+...- ...+.-++..++-.++.+       .+-....++|++++++|+.++...+...+. 
T Consensus        82 lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~-  160 (344)
T PF06379_consen   82 LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEK-  160 (344)
T ss_pred             HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhh-
Confidence            88899999999999999888644 345666777666555433       344567899999999999999887765422 


Q ss_pred             cCCCCCCCcccccccCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 023258          234 SGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIK  275 (285)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~G~l~~llsa~~~A~~~v~~r  275 (285)
                             +..  .+..+.+...|++.++++++..|+.++-..
T Consensus       161 -------~~~--~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~  193 (344)
T PF06379_consen  161 -------ELG--EEAKEFNFKKGLIIAVLSGVMSACFNFGLD  193 (344)
T ss_pred             -------hhc--cchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence                   001  112335567999999999999888776554

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.96  E-value=0.03  Score=50.20  Aligned_cols=147  Identities=13%  Similarity=0.055  Sum_probs=108.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHH
Q 023258          119 PLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAAR  198 (285)
Q Consensus       119 ~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~  198 (285)
                      ++..+.+...+.+.++...++..++... ..+..++.....++...++..+.|.|++|++-=.-++--+.=-+-+++++.
T Consensus        50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~~-~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~  128 (327)
T KOG1581|consen   50 HSLFLVFCQRLVALLVSYAMLKWWKKEL-SGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGT  128 (327)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcccccC-CCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHH
Confidence            5677777777777777766555444333 344456667778888899999999999999887777777777777889999


Q ss_pred             HHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCcccccccCCCchHHHHHHHHHHHHHHHHHHHHHHhhc
Q 023258          199 IILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGA  278 (285)
Q Consensus       199 ~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~llsa~~~A~~~v~~r~l~  278 (285)
                      ++.|.|.+..+.+...++-.|+.+-...+.....        .     +....+.++|+++....-+.=++.+....++-
T Consensus       129 Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~--------~-----~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf  195 (327)
T KOG1581|consen  129 LVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSS--------S-----KSGRENSPIGILLLFGYLLFDGFTNATQDSLF  195 (327)
T ss_pred             HHhcCccCcHHHHHHHHHHhheeeEEEecCCCCc--------c-----ccCCCCchHhHHHHHHHHHHHhhHHhHHHHHh
Confidence            9999999999999999999999776544332100        0     11224578999998888887777777666654


Q ss_pred             c
Q 023258          279 N  279 (285)
Q Consensus       279 ~  279 (285)
                      +
T Consensus       196 ~  196 (327)
T KOG1581|consen  196 K  196 (327)
T ss_pred             c
Confidence            3

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.94  E-value=0.0028  Score=54.74  Aligned_cols=171  Identities=11%  Similarity=0.140  Sum_probs=115.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcCCC-----------CHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHH
Q 023258           94 MCMALSSTIYFFMQVISDVFMVQSI-----------PLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALV  162 (285)
Q Consensus        94 l~~l~a~~~~a~~~v~~k~~~~~~~-----------~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~  162 (285)
                      +++..--+|+-.+.+..........           =+..+++++|..-.++.=+++.+++.....+.+ -+......+.
T Consensus        16 ica~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t~-~~~YaAcs~s   94 (337)
T KOG1580|consen   16 ICAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEIDNTP-TKMYAACSAS   94 (337)
T ss_pred             EEecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccccccCCc-chHHHHHHHH
Confidence            3444445566667776644332111           145566777776665554433344322222222 2334445555


Q ss_pred             HHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCc
Q 023258          163 GFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGE  242 (285)
Q Consensus       163 ~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~  242 (285)
                      ..+.++.-..|++++|--...+--+.-|+-+++++.++.|.+.+|++..+.+++++||.+....+.-..           
T Consensus        95 YLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~-----------  163 (337)
T KOG1580|consen   95 YLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVG-----------  163 (337)
T ss_pred             HHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccC-----------
Confidence            567778888999999999999999999999999999999999999999999999999999876544321           


Q ss_pred             ccccccCCCchHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 023258          243 AISLNVRGSDHMLAVLVGLFSSITGGISYCLIKAGANA  280 (285)
Q Consensus       243 ~~~~~~~~~~~~~G~l~~llsa~~~A~~~v~~r~l~~~  280 (285)
                          +..+....+|.++.+++--+-+..-.+..++.+.
T Consensus       164 ----g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~  197 (337)
T KOG1580|consen  164 ----GAEDKTFGFGELLLILSLAMDGLTGSIQDRIRAS  197 (337)
T ss_pred             ----CCcccccchHHHHHHHHHHhcccchhHHHHHHHh
Confidence                1123456788899998877777766776666543

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=96.85  E-value=0.014  Score=51.59  Aligned_cols=183  Identities=10%  Similarity=0.061  Sum_probs=116.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHH
Q 023258           92 GLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFSFV  171 (285)
Q Consensus        92 G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~  171 (285)
                      |++.++++++++|.+.+-.|..  +.-|++..-++-+....+.-++....++.+.     ...+..++|.+-..++.+-.
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~--~~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~-----f~p~amlgG~lW~~gN~~~v   73 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKF--DTGDGFFFQWVMCSGIFLVGLVVNLILGFPP-----FYPWAMLGGALWATGNILVV   73 (254)
T ss_pred             CchhHHHHHHHhcccceeeEec--cCCCcHHHHHHHHHHHHHHHHHHHHhcCCCc-----ceeHHHhhhhhhhcCceeeh
Confidence            5788999999999999999984  4567777777766655554444444443322     34567888999999999999


Q ss_pred             HHHhccchhHHHHHHhhHHHHHH-HHHHH-Hhc---CcC--cHHHHHHHHHHHHHHHHhhcccccccc---ccCCCC---
Q 023258          172 YSIQRLPLSQATVLSFTAPIMAS-IAARI-ILR---EKL--KIAEIGGLALSFFGVLFIFRRILTTQA---VSGGLV---  238 (285)
Q Consensus       172 ~al~~~~~~~a~~l~~~~Pl~~~-ll~~~-~l~---e~~--~~~~~ig~~l~l~Gv~li~~~~~~~~~---~~~~~~---  238 (285)
                      -.++.++.+.+..+-++.-+++. ..+++ +++   |.+  .+..++|++++++|..+..........   -....+   
T Consensus        74 pii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~~~~~  153 (254)
T PF07857_consen   74 PIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEETPLSI  153 (254)
T ss_pred             hHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCCCCcccccccccccc
Confidence            99999999999888776444333 33333 343   322  356778888888888775542221100   000000   


Q ss_pred             C-CCcc-------cccccCC-----CchHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 023258          239 K-PGEA-------ISLNVRG-----SDHMLAVLVGLFSSITGGISYCLIKAGANAS  281 (285)
Q Consensus       239 ~-~~~~-------~~~~~~~-----~~~~~G~l~~llsa~~~A~~~v~~r~l~~~~  281 (285)
                      + .++.       ++++..+     ...+.|+++++++++.|+...+=..++.++.
T Consensus       154 ~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~  209 (254)
T PF07857_consen  154 EDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDHP  209 (254)
T ss_pred             ccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence            0 0000       0001111     1478999999999999999877777665544

The region concerned is approximately 280 residues long.

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=96.66  E-value=0.0017  Score=57.20  Aligned_cols=141  Identities=13%  Similarity=0.145  Sum_probs=93.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhCC--CCCC------cchHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHhhHH
Q 023258          119 PLFETVFMRCTVTLILSYLWLRRSGQ--PIFG------PMHARNLLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAP  190 (285)
Q Consensus       119 ~p~~~~~~R~~~a~l~l~~~~~~~~~--~~~~------~~~~~~~l~~~~~~~~l~~~~~~~al~~~~~~~a~~l~~~~P  190 (285)
                      .|..+.+++++....+-..+-+...+  ..+.      +-+..+.+.-..+.-.++..+=.+++++.+++---+-.++..
T Consensus        60 ~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLtt  139 (347)
T KOG1442|consen   60 APLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTT  139 (347)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccchhh
Confidence            48889999998876554444332111  1110      111111112122222233333356778888877777778899


Q ss_pred             HHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCcccccccCCCchHHHHHHHHHHHHHHHHH
Q 023258          191 IMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHMLAVLVGLFSSITGGIS  270 (285)
Q Consensus       191 l~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~llsa~~~A~~  270 (285)
                      +|++++.++++|+|-+..-..+..++++|-.+=+..+..                   .+...+.|.++++++.++-|+.
T Consensus       140 vFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~-------------------~~~ls~~GvifGVlaSl~vAln  200 (347)
T KOG1442|consen  140 VFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGS-------------------TGTLSWIGVIFGVLASLAVALN  200 (347)
T ss_pred             hHHHHhHHhhcccccccccceeehhheehheeccccccc-------------------cCccchhhhHHHHHHHHHHHHH
Confidence            999999999999999999988888888887665443322                   2355789999999999999999


Q ss_pred             HHHHHhhc
Q 023258          271 YCLIKAGA  278 (285)
Q Consensus       271 ~v~~r~l~  278 (285)
                      .+.+|+.-
T Consensus       201 aiytkk~l  208 (347)
T KOG1442|consen  201 AIYTKKVL  208 (347)
T ss_pred             HHhhheec
Confidence            99988643

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.45  E-value=0.02  Score=49.60  Aligned_cols=136  Identities=13%  Similarity=0.017  Sum_probs=99.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCC------CCcchHHHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFM-VQSIPLFETVFMRCTVTLILSYLWLRRSGQPI------FGPMHARNLLVLRALV  162 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~-~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~------~~~~~~~~~l~~~~~~  162 (285)
                      ..|-++.+++-.+=+.........- ...-+.-.+++.-.+.+.+.+..-..+.+...      ...+..++-+.+.+++
T Consensus       171 g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~  250 (337)
T KOG1580|consen  171 GFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIA  250 (337)
T ss_pred             chHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHH
Confidence            4577777888777777777664422 12344455666666666655544333322210      0123456777888999


Q ss_pred             HHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhc
Q 023258          163 GFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR  225 (285)
Q Consensus       163 ~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~  225 (285)
                      .++++.+.|.-+.+-++-.-+++..+--+|+++.+.++++.+++.++|+|.++.+.|...=+.
T Consensus       251 s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  251 SCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             HHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence            999999999999998888888899999999999999999999999999999999999876443

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=96.36  E-value=0.00066  Score=61.02  Aligned_cols=122  Identities=20%  Similarity=0.138  Sum_probs=90.2

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCC-cchHHHHHHHHHHHHHH
Q 023258           87 GSRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFG-PMHARNLLVLRALVGFL  165 (285)
Q Consensus        87 ~~~~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~l  165 (285)
                      ++...|.++++.+.++.+.+..+-|....+           ...       -..+.++.... .+.  +..+.+.+...+
T Consensus        17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r-----------~~~-------~~~ra~~gg~~yl~~--~~Ww~G~ltm~v   76 (335)
T KOG2922|consen   17 SDNIIGLVLAISSSIFIGSSFILKKKGLKR-----------AGA-------SGLRAGEGGYGYLKE--PLWWAGMLTMIV   76 (335)
T ss_pred             cCceeeeeehhhccEEEeeehhhhHHHHHH-----------Hhh-------hcccccCCCcchhhh--HHHHHHHHHHHH
Confidence            456889999999999999999998884411           110       00111111111 112  222334444567


Q ss_pred             HHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhcccc
Q 023258          166 SLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRIL  228 (285)
Q Consensus       166 ~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~  228 (285)
                      +-.+-|.|+.+.|+...+.+..+.-++.++++.+++|||+++...+|.+++++|..+++.-..
T Consensus        77 Gei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP  139 (335)
T KOG2922|consen   77 GEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAP  139 (335)
T ss_pred             HhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecC
Confidence            778888899999999999999999999999999999999999999999999999988875443

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=95.95  E-value=0.084  Score=46.76  Aligned_cols=139  Identities=11%  Similarity=0.142  Sum_probs=103.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHH-HHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC-------CcchHHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVIS-DVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIF-------GPMHARNLLVLRAL  161 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~-k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~-------~~~~~~~~l~~~~~  161 (285)
                      ..|+.+.-.+-++=++-.-+. |......-+..+++++-+.++.++++......+.-..       .+.+.....++..+
T Consensus       189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~  268 (367)
T KOG1582|consen  189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL  268 (367)
T ss_pred             eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH
Confidence            456665555555544443333 3332245667888888888888777766655443221       13334567778888


Q ss_pred             HHHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhcccc
Q 023258          162 VGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRIL  228 (285)
Q Consensus       162 ~~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~  228 (285)
                      .++++..+...-++.-++..++++...---++.+++++++..+++-...-+.++++.|+++=+.+..
T Consensus       269 ~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~  335 (367)
T KOG1582|consen  269 AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR  335 (367)
T ss_pred             HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence            8888888888888889999999999999999999999999999999999999999999999877663

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=95.89  E-value=0.098  Score=47.26  Aligned_cols=136  Identities=12%  Similarity=0.145  Sum_probs=106.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHHHhCCCC--------CCcchHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMV-QSIPLFETVFMRCTVTLILSYLWLRRSGQPI--------FGPMHARNLLVLRA  160 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~-~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~--------~~~~~~~~~l~~~~  160 (285)
                      ..|+.+++...+.-+...+..|.-.+ .+.+-+.++++..+++.+.+..+....+...        ......+..+.+.+
T Consensus       156 ~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lSc  235 (314)
T KOG1444|consen  156 LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSC  235 (314)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHH
Confidence            46999999999999999999988543 4788899999999999887776665444311        12233456777888


Q ss_pred             HHHHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhc
Q 023258          161 LVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR  225 (285)
Q Consensus       161 ~~~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~  225 (285)
                      ++++.-.++-+++.+..++..-+++....-+.+.+...++.+++.++...+|+.++++|-.+=..
T Consensus       236 v~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~  300 (314)
T KOG1444|consen  236 VMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSY  300 (314)
T ss_pred             HHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhh
Confidence            88888888889999999888888888666667777777777889999999999999998876543

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=95.39  E-value=0.64  Score=40.89  Aligned_cols=126  Identities=10%  Similarity=0.046  Sum_probs=83.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHH-HHHHHHHHHHHHHHhCC-CCCC---cchHHHHHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMR-CTVTLILSYLWLRRSGQ-PIFG---PMHARNLLVLRALVGF  164 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R-~~~a~l~l~~~~~~~~~-~~~~---~~~~~~~l~~~~~~~~  164 (285)
                      ..|+++.++++++-++..+........+-.+++.--.+ ++.+.++.++....+.. ....   ...+-...+...+...
T Consensus       113 ~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~f~G~~~~~~~~i~~~a  192 (244)
T PF04142_consen  113 LLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESGFFHGYSWWVWIVIFLQA  192 (244)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCCchhhcchHHHHHHHHHH
Confidence            67999999999999999999966553333344333333 33444444333322221 1110   1122223344445556


Q ss_pred             HHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHH
Q 023258          165 LSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLAL  215 (285)
Q Consensus       165 l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l  215 (285)
                      ++-++.-.-++|.+.-.=..-....-+++.++++++++.+++....+|..+
T Consensus       193 ~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~  243 (244)
T PF04142_consen  193 IGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL  243 (244)
T ss_pred             HhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence            666677778899888888888889999999999999999999998888653

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK02237 hypothetical protein; Provisional

Probab=95.11  E-value=0.45  Score=36.13  Aligned_cols=47  Identities=9%  Similarity=0.012  Sum_probs=37.8

Q ss_pred             hhHH-HHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhc
Q 023258          179 LSQA-TVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR  225 (285)
Q Consensus       179 ~~~a-~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~  225 (285)
                      .+.+ +..-..+.+...+..|.+-+.||++.+++|..++++|+.+|..
T Consensus        58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~  105 (109)
T PRK02237         58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY  105 (109)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence            4444 2333467777788999999999999999999999999988854

>KOG4831 consensus Unnamed protein [Function unknown]

Probab=94.63  E-value=0.35  Score=36.55  Aligned_cols=111  Identities=13%  Similarity=0.078  Sum_probs=74.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCC------CHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHH
Q 023258           95 CMALSSTIYFFMQVISDVFMVQSI------PLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLF  168 (285)
Q Consensus        95 ~~l~a~~~~a~~~v~~k~~~~~~~------~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~  168 (285)
                      -+++.+++|+..+.+.|... .+.      +.-...++|-.....+                 .|.+++ -.+..-.+..
T Consensus         7 ~lvaVgllWG~Tnplirrgs-~g~~~v~~~~~k~~~~lqe~~tl~l-----------------~w~Y~i-PFllNqcgSa   67 (125)
T KOG4831|consen    7 KLVAVGLLWGATNPLIRRGS-LGWDKVKSSSRKIMIALQEMKTLFL-----------------NWEYLI-PFLLNQCGSA   67 (125)
T ss_pred             HHHHHHHHHccccHHHHHHH-hhHhhccCchHHHHHHHHHHHHHHH-----------------hHHHHH-HHHHHHhhHH
Confidence            35677888999999999864 222      2333333333322111                 112222 2223345667


Q ss_pred             HHHHHHhccchhHHHHHHh-hHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhh
Q 023258          169 SFVYSIQRLPLSQATVLSF-TAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF  224 (285)
Q Consensus       169 ~~~~al~~~~~~~a~~l~~-~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~  224 (285)
                      +||.-+++.|.+.+..+.+ +.-.|+.+.+..+-.|-..++-++|..++.+|+++.+
T Consensus        68 ly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci  124 (125)
T KOG4831|consen   68 LYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI  124 (125)
T ss_pred             HHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence            8889999999999888865 6778899999885555677888999999999998753

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=94.59  E-value=0.95  Score=40.90  Aligned_cols=134  Identities=18%  Similarity=0.189  Sum_probs=84.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHH-HHhCCCC---------CCcchHHH-
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQ----SIPLFETVFMRCTVTLILSYLWL-RRSGQPI---------FGPMHARN-  154 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~----~~~p~~~~~~R~~~a~l~l~~~~-~~~~~~~---------~~~~~~~~-  154 (285)
                      ..|..+..+++++-|+-..+.+.+...    .-+|+...+.-.-.-.+.+++.. .+.+...         ..+...++ 
T Consensus       163 i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv  242 (349)
T KOG1443|consen  163 IEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRV  242 (349)
T ss_pred             ehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHH
Confidence            579999999999988888888776532    23466655544433333333332 2333211         11111222 


Q ss_pred             --HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHh
Q 023258          155 --LLVLRALVGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFI  223 (285)
Q Consensus       155 --~l~~~~~~~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li  223 (285)
                        .+.++|+..+.--.+-|.-+..++.-..++..-.-=+.+.+++..+.+++++..-|+|+.+++.|+.+=
T Consensus       243 ~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  243 IGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence              223333333333344455556666666666666666888999999999999999999999999999876

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=94.51  E-value=0.0045  Score=53.83  Aligned_cols=127  Identities=15%  Similarity=0.141  Sum_probs=90.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARNLLVLRALVGFLSLFS  169 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~  169 (285)
                      .+|+...+.+.+.|-.+.++.+...-++.+...--..-++++++.+.    ..+...+..+ ..++-.+.|+....++++
T Consensus       151 kkgi~~L~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~ali~~----~~~~~~~~~K-~t~~nii~G~~Wa~GNl~  225 (288)
T COG4975         151 KKGIVILLISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGALILG----FFKMEKRFNK-YTWLNIIPGLIWAIGNLF  225 (288)
T ss_pred             hhheeeeeeeccceeeeEeeeccccccchhhhhHHHHHHHHHHHHHh----hcccccchHH-HHHHHHhhHHHHHhhHHH
Confidence            67888888888888888888776433455555555555555544432    2222222233 345567788888999999


Q ss_pred             HHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhh
Q 023258          170 FVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF  224 (285)
Q Consensus       170 ~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~  224 (285)
                      +++|-+..+.+.+=.+..+..+...+-+.+++|||=+++++..   ..+|+++++
T Consensus       226 ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~---v~iGiiliv  277 (288)
T COG4975         226 MLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVY---VIIGIILIV  277 (288)
T ss_pred             HHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhh---hhhhHHHHH
Confidence            9999999999998888899999999999999999999998754   334444444

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=94.33  E-value=0.43  Score=36.19  Aligned_cols=53  Identities=11%  Similarity=0.086  Sum_probs=41.0

Q ss_pred             HhccchhHH-HHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhcc
Q 023258          174 IQRLPLSQA-TVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRR  226 (285)
Q Consensus       174 l~~~~~~~a-~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~  226 (285)
                      ++-.+.+.+ +..-....+...+..|.+-|++|++.+++|..++++|+.+|...
T Consensus        51 l~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~  104 (107)
T PF02694_consen   51 LQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA  104 (107)
T ss_pred             cCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence            333444444 33344777888889999999999999999999999999988754

; GO: 0016020 membrane

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=94.21  E-value=0.46  Score=41.06  Aligned_cols=133  Identities=10%  Similarity=0.105  Sum_probs=100.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCC------cchHHHHHHHHHHHH
Q 023258           91 SGLMCMALSSTIYFFMQVISDVFM-VQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFG------PMHARNLLVLRALVG  163 (285)
Q Consensus        91 ~G~l~~l~a~~~~a~~~v~~k~~~-~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~------~~~~~~~l~~~~~~~  163 (285)
                      .|++++..-++.-+......|... ..+.--++.+++..+++..+++.+-....++...      +.......+..|++.
T Consensus       155 ~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~s  234 (309)
T COG5070         155 PGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCS  234 (309)
T ss_pred             CceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHH
Confidence            477777777766666666666532 1467788899999999998888776654433222      223344667788888


Q ss_pred             HHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHh
Q 023258          164 FLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFI  223 (285)
Q Consensus       164 ~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li  223 (285)
                      +.-.++--|.++-++...-+.+..+.-.-.++-+.++++|+.+...+.+++++++...+-
T Consensus       235 vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iY  294 (309)
T COG5070         235 VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIY  294 (309)
T ss_pred             hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHH
Confidence            777788888999999999899999999999999999999999999999999988655443

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=93.09  E-value=0.12  Score=45.97  Aligned_cols=136  Identities=13%  Similarity=0.092  Sum_probs=91.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHHHhCC-------CCCCcchHHHHHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMVQ-SIPLFETVFMRCTVTLILSYLWLRRSGQ-------PIFGPMHARNLLVLRAL  161 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~~-~~~p~~~~~~R~~~a~l~l~~~~~~~~~-------~~~~~~~~~~~l~~~~~  161 (285)
                      ..|+++++.++++-++..+..|..... +-.-+.+.++..+.+.++.++.+...+.       +.....+.|..+.++|+
T Consensus       184 ~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsgl  263 (347)
T KOG1442|consen  184 WIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGL  263 (347)
T ss_pred             hhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHH
Confidence            679999999999999999999875422 2335567777888888888887765542       11223445667777888


Q ss_pred             HHHHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhc
Q 023258          162 VGFLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFR  225 (285)
Q Consensus       162 ~~~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~  225 (285)
                      +++...+.-.+=++-+++-.=.+-...--.-=.+++..+++|--+...|-+-+++++|..+-..
T Consensus       264 fgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~  327 (347)
T KOG1442|consen  264 FGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTL  327 (347)
T ss_pred             HHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHH
Confidence            8765555444445555443211111122233356777889999999999999888888766543

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=92.99  E-value=0.15  Score=44.93  Aligned_cols=134  Identities=12%  Similarity=0.027  Sum_probs=86.8

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcchHHH--HHHHHHHHHHH
Q 023258           88 SRYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWLRRSGQPIFGPMHARN--LLVLRALVGFL  165 (285)
Q Consensus        88 ~~~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~l  165 (285)
                      +..+|..++++++.+++.+++.-.++. .+.+-.+++..-.+++.++..+-....+.........+.  ..+...++.++
T Consensus       163 np~~GD~lvi~GATlYaVSNv~EEflv-kn~d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~w~~~i~~yl~f~L~MFl  241 (336)
T KOG2766|consen  163 NPVKGDFLVIAGATLYAVSNVSEEFLV-KNADRVELMGFLGLFGAIISAIQFIFERHHVSTLHWDSAIFLYLRFALTMFL  241 (336)
T ss_pred             CCccCcEEEEecceeeeeccccHHHHH-hcCcHHHHHHHHHHHHHHHHHHHHhhhccceeeEeehHHHHHHHHHHHHHHH
Confidence            447899999999999999999999977 889999999988888888877665544433221111121  11112222222


Q ss_pred             HHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhh
Q 023258          166 SLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF  224 (285)
Q Consensus       166 ~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~  224 (285)
                      .+.+.-.-++..++..-.+-.-+.-++..++  ..++=+.+|...++...+..|.++-.
T Consensus       242 lYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs  298 (336)
T KOG2766|consen  242 LYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYS  298 (336)
T ss_pred             HHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEee
Confidence            2222223444444444433344555666666  55677799999999999999987653

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=92.67  E-value=8.2  Score=35.58  Aligned_cols=136  Identities=13%  Similarity=0.108  Sum_probs=83.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHH-HHHHHHHHHHHHh-CCCCC--C-cchHHHHHHHHHHHH
Q 023258           89 RYSGLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCT-VTLILSYLWLRRS-GQPIF--G-PMHARNLLVLRALVG  163 (285)
Q Consensus        89 ~~~G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~-~a~l~l~~~~~~~-~~~~~--~-~~~~~~~l~~~~~~~  163 (285)
                      ...|....+.++++-++.++.-..++..+-.+.++-=+|+- ++.++-+.-++.. +.+..  + ...+-+..++..+..
T Consensus       181 ~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl~~  260 (345)
T KOG2234|consen  181 PFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVLLN  260 (345)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHHHHH
Confidence            36799999999999999999886655333344444333333 3333333323221 11110  0 111222333333333


Q ss_pred             HHHHHHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhh
Q 023258          164 FLSLFSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF  224 (285)
Q Consensus       164 ~l~~~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~  224 (285)
                      ..+-++.-.-++|..--.=..-..+..+++.+.++++++-+++....+|+.+++..+.+=.
T Consensus       261 a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~  321 (345)
T KOG2234|consen  261 AVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYS  321 (345)
T ss_pred             hccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhh
Confidence            4444444444555555554555667888999999999999999999999999999888766

>COG1742 Uncharacterized conserved protein [Function unknown]

Probab=91.92  E-value=2.2  Score=32.19  Aligned_cols=40  Identities=13%  Similarity=-0.052  Sum_probs=34.3

Q ss_pred             hhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhcc
Q 023258          187 FTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRR  226 (285)
Q Consensus       187 ~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~  226 (285)
                      ..+.+...+..+++-|.+|++.+|+|..++++|+.+|..+
T Consensus        66 GvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~  105 (109)
T COG1742          66 GVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG  105 (109)
T ss_pred             chHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence            3666777788888889999999999999999999887754

>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function

Probab=90.58  E-value=5  Score=30.44  Aligned_cols=52  Identities=21%  Similarity=0.214  Sum_probs=38.3

Q ss_pred             HHhccchhHHHHHHh-hHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhh
Q 023258          173 SIQRLPLSQATVLSF-TAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIF  224 (285)
Q Consensus       173 al~~~~~~~a~~l~~-~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~  224 (285)
                      +.+..+++.--+++- .+-..-+.++.+++||++++..+.|.++.+.+++++.
T Consensus        55 G~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF  107 (108)
T PF04342_consen   55 GYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFIF  107 (108)
T ss_pred             hccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence            444455666555654 3445556778899999999999999999998887764

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=89.52  E-value=2.9  Score=37.42  Aligned_cols=137  Identities=14%  Similarity=0.109  Sum_probs=93.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHH---------HhCCC--CCCcchHHHHHH
Q 023258           90 YSGLMCMALSSTIYFFMQVISDVFMV-QSIPLFETVFMRCTVTLILSYLWLR---------RSGQP--IFGPMHARNLLV  157 (285)
Q Consensus        90 ~~G~l~~l~a~~~~a~~~v~~k~~~~-~~~~p~~~~~~R~~~a~l~l~~~~~---------~~~~~--~~~~~~~~~~l~  157 (285)
                      ..|+.+..++.+.-+.+++....... .+-++-+.+++-..+...+++....         +..++  .+.........+
T Consensus       163 ~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~  242 (330)
T KOG1583|consen  163 LIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMW  242 (330)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHH
Confidence            56888888999988888888866542 3778999999999888776654321         11110  000001122334


Q ss_pred             HHHHHHHHHHHHHHHHHhccch----hHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhcc
Q 023258          158 LRALVGFLSLFSFVYSIQRLPL----SQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRR  226 (285)
Q Consensus       158 ~~~~~~~l~~~~~~~al~~~~~----~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~  226 (285)
                      ..-++.++.++...-++..++.    -+++++..+-=++..+++.+.++..+++..|+|..+.++|.++-...
T Consensus       243 ~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~  315 (330)
T KOG1583|consen  243 VYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANV  315 (330)
T ss_pred             HHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            4455555666555544444333    33556667788899999999999999999999999999999886543

>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues

Probab=87.31  E-value=17  Score=30.89  Aligned_cols=88  Identities=10%  Similarity=0.057  Sum_probs=35.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH-HHhCCCCCCcchHHHHHHHHHHHHHHHHHHH
Q 023258           92 GLMCMALSSTIYFFMQVISDVFMVQSIPLFETVFMRCTVTLILSYLWL-RRSGQPIFGPMHARNLLVLRALVGFLSLFSF  170 (285)
Q Consensus        92 G~l~~l~a~~~~a~~~v~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~  170 (285)
                      ++++..+-+++.++...+.+... ...+...++..- +++.+++..+. +..+......+..++..++.++..++.+...
T Consensus        86 ~L~~~~if~~~~gi~~~f~~~~~-~~~gi~tli~~~-i~~G~~~~~~~~~i~~~~~~~~r~~~~k~~~~~~~~~~~w~~~  163 (206)
T PF06570_consen   86 SLLFFGIFSLLFGIMGFFSPKNS-NQYGIITLILVS-IVGGLVFYFIFKYIYPYKKKKKRPSWWKYILISVLAMVLWIVI  163 (206)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccc-ccccHHHHHHHH-HHHHHHHHHHHHHHhcccccccccHHHHHHHHHHHHHHHHHHH
Confidence            34444445555666665555322 222333333222 33333333332 2232112222223333334444444455444


Q ss_pred             HHHHhccchhH
Q 023258          171 VYSIQRLPLSQ  181 (285)
Q Consensus       171 ~~al~~~~~~~  181 (285)
                      +.....+|+..
T Consensus       164 ~~~~~~lp~~i  174 (206)
T PF06570_consen  164 FVLTSFLPPVI  174 (206)
T ss_pred             HHHHHHccccC
Confidence            44444466553

However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).

>TIGR00803 nst UDP-galactose transporter

Probab=86.51  E-value=3.4  Score=35.34  Aligned_cols=103  Identities=10%  Similarity=0.037  Sum_probs=62.3

Q ss_pred             hHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhcccccccc----ccCC-CCCCCcccccccCCCchH
Q 023258          180 SQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQA----VSGG-LVKPGEAISLNVRGSDHM  254 (285)
Q Consensus       180 ~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~  254 (285)
                      -......+..++++++.++.+.++|.+..++++.++...|+......+..-..    ..|- ....++.........+.+
T Consensus         5 Pa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~~~   84 (222)
T TIGR00803         5 PIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGNPV   84 (222)
T ss_pred             cchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccccHH
Confidence            34556677888999999999899998899999999988888754333221000    0000 000000000011223567


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 023258          255 LAVLVGLFSSITGGISYCLIKAGANASD  282 (285)
Q Consensus       255 ~G~l~~llsa~~~A~~~v~~r~l~~~~~  282 (285)
                      .|....+.+.++-+...+..++..|..+
T Consensus        85 ~g~~~~l~a~~~~~~~~~y~e~~~k~~~  112 (222)
T TIGR00803        85 VGLSAVLSALLSSGFAGVYFEKILKDGD  112 (222)
T ss_pred             HHHHHHHHHHHHHhhhHHHHHHcccCCC
Confidence            7887777777777777787777665543

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=86.35  E-value=7.3  Score=33.85  Aligned_cols=96  Identities=9%  Similarity=0.068  Sum_probs=72.6

Q ss_pred             HHHHHHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCcccccc
Q 023258          168 FSFVYSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLN  247 (285)
Q Consensus       168 ~~~~~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~  247 (285)
                      +.---+++|++...-++.-++..+..+....+++|.|++..+....++.++.-+...+++.....+              
T Consensus        83 yt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~--------------  148 (309)
T COG5070          83 YTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAF--------------  148 (309)
T ss_pred             HhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHH--------------
Confidence            333468999999999999999999999999999999999999999888888887777766532110              


Q ss_pred             cCCCchHHHHHHHHHHHHHHHHHHHHHHhhc
Q 023258          248 VRGSDHMLAVLVGLFSSITGGISYCLIKAGA  278 (285)
Q Consensus       248 ~~~~~~~~G~l~~llsa~~~A~~~v~~r~l~  278 (285)
                       ....--.|++|...-.+.-|.+....|+-.
T Consensus       149 -~~~~lN~GY~Wm~~NclssaafVL~mrkri  178 (309)
T COG5070         149 -KAQILNPGYLWMFTNCLSSAAFVLIMRKRI  178 (309)
T ss_pred             -HhcccCCceEEEehhhHhHHHHHHHHHHhh
Confidence             001122477777777777788777777544

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=85.81  E-value=17  Score=32.72  Aligned_cols=135  Identities=15%  Similarity=0.170  Sum_probs=88.2

Q ss_pred             chHHHHHHHHHHHHHHHHHHHH-HHhhcCCCCHHHHHHHHHHHHHHHHHHHHH----H-hCCC----CCCcchHHHH---
Q 023258           89 RYSGLMCMALSSTIYFFMQVIS-DVFMVQSIPLFETVFMRCTVTLILSYLWLR----R-SGQP----IFGPMHARNL---  155 (285)
Q Consensus        89 ~~~G~l~~l~a~~~~a~~~v~~-k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~----~-~~~~----~~~~~~~~~~---  155 (285)
                      -..|.++.+.+-++-+.-.++- |++...+++|.+.+.+..+++..++-.+..    . .++.    +.....++..   
T Consensus       174 iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~  253 (372)
T KOG3912|consen  174 IITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFA  253 (372)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHH
Confidence            3579999999999999999988 445556899999999999988544432221    1 1111    1111112221   


Q ss_pred             ------HHHHHHHHHHHHHHHH-----HHHhccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHh
Q 023258          156 ------LVLRALVGFLSLFSFV-----YSIQRLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFI  223 (285)
Q Consensus       156 ------l~~~~~~~~l~~~~~~-----~al~~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li  223 (285)
                            .+...+.++.....||     +--++.++++=.++-.+-..+.=+++.....|++...++.|.++-+.|+++-
T Consensus       254 ~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY  332 (372)
T KOG3912|consen  254 ALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILY  332 (372)
T ss_pred             HhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  1222222222222221     2234467777777778777777778888889999999999999999999873

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=85.02  E-value=0.44  Score=42.43  Aligned_cols=70  Identities=10%  Similarity=0.219  Sum_probs=55.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhc-cchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhcc
Q 023258          157 VLRALVGFLSLFSFVYSIQR-LPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRR  226 (285)
Q Consensus       157 ~~~~~~~~l~~~~~~~al~~-~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~  226 (285)
                      +......+....+=.+|+++ +|.-.=.++.+-.++-+++++|+++|.|.+.+++.+.++..+|+++-...
T Consensus        68 ~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~  138 (330)
T KOG1583|consen   68 AITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLF  138 (330)
T ss_pred             heehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEee
Confidence            33334445556666778877 55555667778899999999999999999999999999999999886543

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=83.68  E-value=20  Score=32.13  Aligned_cols=157  Identities=10%  Similarity=0.048  Sum_probs=90.4

Q ss_pred             HHHHHHHHHHHHHhhc-CCCCH--HHHHHHHHHHHHHHHHHHHH-HhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHh
Q 023258          100 STIYFFMQVISDVFMV-QSIPL--FETVFMRCTVTLILSYLWLR-RSGQPIFGPMHARNLLVLRALVGFLSLFSFVYSIQ  175 (285)
Q Consensus       100 ~~~~a~~~v~~k~~~~-~~~~p--~~~~~~R~~~a~l~l~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~al~  175 (285)
                      -+.+-.+..+..+... ++..|  +.+++.++++-..+.++-+. ++.+++.   ..|+..+..+.+......+--.++.
T Consensus        52 Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~---iP~rtY~~la~~t~gtmGLsn~Slg  128 (367)
T KOG1582|consen   52 FFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRV---IPWRTYVILAFLTVGTMGLSNGSLG  128 (367)
T ss_pred             HHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeeccccee---cchhHhhhhHhhhhhccccCcCccc
Confidence            3445566666666542 35554  34555555544332222111 1111111   1233333344444444455555666


Q ss_pred             ccchhHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccccccccccCCCCCCCcccccccCCCchHH
Q 023258          176 RLPLSQATVLSFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRILTTQAVSGGLVKPGEAISLNVRGSDHML  255 (285)
Q Consensus       176 ~~~~~~a~~l~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (285)
                      |++--.-.+.-.+--+-+++.+.++-+.|.++.+.++..+..+|+++....+...                  ..+.+..
T Consensus       129 YLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~------------------sPNF~~~  190 (367)
T KOG1582|consen  129 YLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQT------------------SPNFNLI  190 (367)
T ss_pred             cccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccccc------------------CCCccee
Confidence            6655555555555556667788899999999999999999999999887766543                  1244667


Q ss_pred             HHHHHHHHHHHHHHH-HHHHHhh
Q 023258          256 AVLVGLFSSITGGIS-YCLIKAG  277 (285)
Q Consensus       256 G~l~~llsa~~~A~~-~v~~r~l  277 (285)
                      |+.+.-.+-++-|+- ++.-|.+
T Consensus       191 Gv~mIsgALl~DA~iGNvQEk~m  213 (367)
T KOG1582|consen  191 GVMMISGALLADAVIGNVQEKAM  213 (367)
T ss_pred             eHHHHHHHHHHHHHhhHHHHHHH
Confidence            877766666666554 4443433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	285
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.97
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.89

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.97  E-value=2.1e-08  Score=76.40  Aligned_cols=70  Identities=20%  Similarity=0.220  Sum_probs=64.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhccchhHHHHH-HhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhcc
Q 023258          157 VLRALVGFLSLFSFVYSIQRLPLSQATVL-SFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRR  226 (285)
Q Consensus       157 ~~~~~~~~l~~~~~~~al~~~~~~~a~~l-~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~  226 (285)
                      +...++..++++++.+++++.|.+.+..+ ..+.|+++++++++++||+++..+++|+.++++|++++...
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~  104 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            45566678889999999999999999888 79999999999999999999999999999999999998654

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.89  E-value=5.2e-09  Score=82.75  Aligned_cols=71  Identities=20%  Similarity=0.208  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhccchhHHHHH-HhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHhhccc
Q 023258          157 VLRALVGFLSLFSFVYSIQRLPLSQATVL-SFTAPIMASIAARIILREKLKIAEIGGLALSFFGVLFIFRRI  227 (285)
Q Consensus       157 ~~~~~~~~l~~~~~~~al~~~~~~~a~~l-~~~~Pl~~~ll~~~~l~e~~~~~~~ig~~l~l~Gv~li~~~~  227 (285)
                      +++.++..++++++.++++++|++.+..+ .++.|++++++++++++|++++.+++|++++++|++++...+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            55666778999999999999999999888 899999999999999999999999999999999999987644

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00