Citrus Sinensis ID: 023290
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 284 | 2.2.26 [Sep-21-2011] | |||||||
| Q9R9N2 | 351 | Lipopolysaccharide core b | yes | no | 0.767 | 0.621 | 0.246 | 7e-12 | |
| D2Q1C4 | 424 | D-inositol 3-phosphate gl | yes | no | 0.616 | 0.412 | 0.293 | 2e-09 | |
| P46915 | 377 | Spore coat protein SA OS= | yes | no | 0.651 | 0.490 | 0.285 | 5e-09 | |
| P39862 | 380 | Capsular polysaccharide b | yes | no | 0.626 | 0.468 | 0.268 | 3e-08 | |
| C7R101 | 424 | D-inositol 3-phosphate gl | yes | no | 0.507 | 0.339 | 0.287 | 3e-07 | |
| A1R8N8 | 408 | D-inositol 3-phosphate gl | yes | no | 0.760 | 0.529 | 0.250 | 4e-07 | |
| C3PK12 | 421 | D-inositol 3-phosphate gl | yes | no | 0.700 | 0.472 | 0.260 | 4e-07 | |
| O34413 | 407 | Putative glycosyltransfer | no | no | 0.686 | 0.479 | 0.273 | 1e-06 | |
| Q8X0H8 | 471 | Alpha-1,3/1,6-mannosyltra | N/A | no | 0.334 | 0.201 | 0.378 | 1e-06 | |
| Q8FSH1 | 424 | D-inositol 3-phosphate gl | yes | no | 0.672 | 0.450 | 0.275 | 1e-06 |
| >sp|Q9R9N2|LPSB_RHIME Lipopolysaccharide core biosynthesis mannosyltransferase LpsB OS=Rhizobium meliloti (strain 1021) GN=lpsB PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 98/239 (41%), Gaps = 21/239 (8%)
Query: 41 IKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQD 100
+ +P+T ++H ++K + AK+ +LG+ V KG D
Sbjct: 132 LDVPNTVILHGIDTKRFQPPFDKTEAKK--------ALGLDPAKKFVGCFGRVRHQKGTD 183
Query: 101 LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 160
LF+ S L P A++ G FESEL+ V + + DR+ FV +
Sbjct: 184 LFVDSMIALLPC-------RPDWGAIVAGRATGPHLAFESELKERVAKAGLADRILFVGE 236
Query: 161 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGT--TGL 218
+ + A+D+ V Q W E FG +EAMA +PV+ T G +E+V G+ TGL
Sbjct: 237 HTNIPDWYRALDLFVA-PQRW-EGFGLTPLEAMATGVPVVATDVGAFSELVTGGSEETGL 294
Query: 219 LHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK 277
+ + + + + R G R + F A IA V + +++
Sbjct: 295 I--IAADDLKAMVDAAAAFMDDRPRLAAASANGLARTSKNFAIEQEARAIAAVYESLMR 351
|
Acts at transfer of mannose group to a 3-deoxy-D-mono octulonic acid (KDO) via an alpha-1,5 linkage. Rhizobium meliloti (strain 1021) (taxid: 266834) EC: 2EC: .EC: 4EC: .EC: -EC: .EC: - |
| >sp|D2Q1C4|MSHA_KRIFD D-inositol 3-phosphate glycosyltransferase OS=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) GN=mshA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 9/184 (4%)
Query: 75 RESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA 134
R ++GVR + ++ A + + K DL + + LE ++ +L V AVI G N
Sbjct: 223 RRAVGVREDAIVLAFVGRIQPLKAPDLLIRAAARMLE--RQPELRDRLVVAVIGGPSGNG 280
Query: 135 QTKFESELRNYVMQKKIQDRVHFVNKTL--TVAPYLAAIDVLVQNSQAWGECFGRITIEA 192
E+ + + D FV +A + A V+ S + E FG + +EA
Sbjct: 281 MEHPEAHA-ELARRLGVDDVTRFVKPMPRPGLADWYRAASVVCVPS--YSESFGLVALEA 337
Query: 193 MAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGY 252
A PV+ A GG T V +G TGLL P G+ A + +AT R TMGK
Sbjct: 338 QACGTPVVAAAVGGLTTAVTDGVTGLLVP--GHGVDDFADALAAIATDPGTRETMGKAAV 395
Query: 253 ERVK 256
E +
Sbjct: 396 EHAQ 399
|
Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) (taxid: 479435) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 0 |
| >sp|P46915|COTSA_BACSU Spore coat protein SA OS=Bacillus subtilis (strain 168) GN=cotSA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 25/210 (11%)
Query: 71 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS 130
RE +R LG+ + ++ + +S+ KG + L + + +E E P V V IGS
Sbjct: 179 REEMRSELGLHGKKIVL-FVGRLSKVKGPHILLQALPDIIE-------EHPDVMMVFIGS 230
Query: 131 DMNAQTKFESELRNYV--------MQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWG 182
++EL NYV MQK + FV K + DV V +SQ W
Sbjct: 231 KWFG----DNELNNYVKHLHTLGAMQKDHVTFIQFV-KPKDIPRLYTMSDVFVCSSQ-WQ 284
Query: 183 ECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTG-LLHPVGKEGITPLAKNIVKLATHV 241
E R+ EAMA LP++ + GG E++ G G ++H E A+ I L +
Sbjct: 285 EPLARVHYEAMAAGLPIITSNRGGNPEVIEEGKNGYIIHDF--ENPKQYAERINDLLSSS 342
Query: 242 ERRLTMGKRGYERVKEIFQEHHMAERIAVV 271
E+R +GK + F +AE + V
Sbjct: 343 EKRERLGKYSRREAESNFGWQRVAENLLSV 372
|
Bacillus subtilis (strain 168) (taxid: 224308) EC: 2 EC: . EC: 4 EC: . EC: - EC: . EC: - |
| >sp|P39862|CAPM_STAAU Capsular polysaccharide biosynthesis glycosyltransferase CapM OS=Staphylococcus aureus GN=capM PE=3 SV=1 | Back alignment and function description |
|---|
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 27/205 (13%)
Query: 82 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESE 141
N++ + + + + KG +H +S ++I K +V ++IGS + ES+
Sbjct: 195 NDNFVIGYVGRIVKDKG----IHELIQSFKIIVSKGY---NVKLLVIGSLETENSIDESD 247
Query: 142 L------RNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAF 195
N V+ K + D + F N ++V V + G FG ++IEA A
Sbjct: 248 YLFLTQNPNVVLIKHVSDPISFYNN----------MNVFVFPTHREG--FGNVSIEAQAL 295
Query: 196 QLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERV 255
++PV+ T G + VVNG TG + V K +A+ I KL R T+G G +RV
Sbjct: 296 EVPVITTNVTGAIDTVVNGETGFI--VEKGDFKAIAEKIEKLINDESLRETIGHNGRKRV 353
Query: 256 KEIFQEHHMAERIAVVLKEVLKKSK 280
+ F + E + + LK+S+
Sbjct: 354 ENKFSSQIIWEELESMYNTFLKESE 378
|
Required for the biosynthesis of type 1 capsular polysaccharide. Staphylococcus aureus (taxid: 1280) EC: 2 EC: . EC: 4 EC: . EC: - EC: . EC: - |
| >sp|C7R101|MSHA_JONDD D-inositol 3-phosphate glycosyltransferase OS=Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) GN=mshA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Query: 71 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS 130
R+ R +LG+ E + + KG D+ + ++L L++ ++ + P VIIG
Sbjct: 219 RQAERVALGLAPEGDVIVFAGRIQPLKGPDVLV----DALALLRSQQPDRPMPTLVIIGG 274
Query: 131 DMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRI 188
ELR V Q+ + V FV T+A ++ D + S+ E FG +
Sbjct: 275 PSGRPAAL-GELRARVFQRGVAQHVRFVPPADRPTLAQWMRVADYVAMPSR--NESFGLV 331
Query: 189 TIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHP 221
IEA A PV+ GG T V + +GLL P
Sbjct: 332 AIEAQACGTPVIAADVGGLTTAVAHKKSGLLVP 364
|
Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) (taxid: 471856) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 0 |
| >sp|A1R8N8|MSHA_ARTAT D-inositol 3-phosphate glycosyltransferase OS=Arthrobacter aurescens (strain TC1) GN=mshA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 35/251 (13%)
Query: 45 DTYVVHLGNSKELMEVAEDNVAKRVL----REHVRESLGVRNEDLLFAIINSVSRGKGQD 100
D V H G + ++VA V +V R R GVR + + R KG
Sbjct: 176 DELVSHYGADLDRIDVAPPGVDLKVFTPSFRRKSRSLRGVRPDSFHILFAGRIQRLKGPQ 235
Query: 101 LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 160
+F+ ++ ++++++ ++ + I+GS A+ + L++++ + D V ++
Sbjct: 236 VFV----KAAGILRKRRPDI-DLEMTILGSLSGAK---DFNLQHFIEDAGLADVV--THR 285
Query: 161 TLTVAPYLAA----IDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTT 216
VAP LA+ DV+V S + E FG + +EA A PV+ T GG + + +G T
Sbjct: 286 PPVVAPELASWFRSADVVVMPS--FSESFGLVALEAQACGTPVVATNVGGLSRAISDGRT 343
Query: 217 GLL----HPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL 272
G+L HP + A + L V+ R MG R+ E +R A +
Sbjct: 344 GILVDGHHP------SDWADALEDLYDDVQTREDMG-----RLAATHAESFGWQRTAAIT 392
Query: 273 KEVLKKSKSHL 283
E +++ S L
Sbjct: 393 LESYREAVSGL 403
|
Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. Arthrobacter aurescens (strain TC1) (taxid: 290340) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 0 |
| >sp|C3PK12|MSHA_CORA7 D-inositol 3-phosphate glycosyltransferase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=mshA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 20/219 (9%)
Query: 44 PDT-YVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLF 102
PD VV G +L D + +R R+ LG+ + A + + + KG D+
Sbjct: 187 PDNIVVVSPGADTDLYTPGTDRMTERARRQ-----LGIPLHTKVVAFVGRLQKFKGPDVL 241
Query: 103 LHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL 162
+ + E +E +++L V VI G A + ++ N + ++ V F++
Sbjct: 242 IRATAELMERDPDRRLRV-----VICGGASGANSSPDT-YHNLARELGVERVVRFLSPRP 295
Query: 163 T---VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLL 219
VA Y AA V V + + E FG + +EA A PV+ A GG V +G TGLL
Sbjct: 296 PQELVAIYQAADIVAVPS---YNESFGLVAMEAQASGTPVVAAAVGGLPIAVADGDTGLL 352
Query: 220 HPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEI 258
V A + +L RR++MG+ + ++
Sbjct: 353 --VHSHSAQDWADALEQLLDDDPRRISMGEAAVDHAQQF 389
|
Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) (taxid: 548476) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 0 |
| >sp|O34413|YTCC_BACSU Putative glycosyltransferase YtcC OS=Bacillus subtilis (strain 168) GN=ytcC PE=3 SV=1 | Back alignment and function description |
|---|
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 17/212 (8%)
Query: 70 LREHVRESLGVRNED-LLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII 128
+R+ R+ G+ ++ +LFA +S KG L +HS L+ + P VI
Sbjct: 178 VRKTYRKKYGIEDKKVILFA--GRLSPTKGPHLLIHSMRRILQ-------QHPDAVLVIA 228
Query: 129 GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAI----DVLVQNSQAWGEC 184
G + E++ Y+ + R H + A + + DV V +SQ W E
Sbjct: 229 GGKWFSDDS-ENQYVTYLRTLALPYRDHIIFTKFIPADDIPNLFLMADVFVCSSQ-WNEP 286
Query: 185 FGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERR 244
R+ EAMA P++ T GG E+V + TGL+ + + AK I + T E
Sbjct: 287 LARVNYEAMAAGTPLITTNRGGNGEVVKHEVTGLVIDSYNKP-SSFAKAIDRAFTDQELM 345
Query: 245 LTMGKRGYERVKEIFQEHHMAERIAVVLKEVL 276
M K + V+ +F H A+R+ V + VL
Sbjct: 346 NKMTKNARKHVEALFTFTHAAKRLNTVYQSVL 377
|
Bacillus subtilis (strain 168) (taxid: 224308) EC: 2 EC: . EC: 4 EC: . EC: - EC: . EC: - |
| >sp|Q8X0H8|ALG2_NEUCR Alpha-1,3/1,6-mannosyltransferase alg-2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=alg-2 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 47/95 (49%)
Query: 183 ECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVE 242
E FG + +EAM +PVL GG TE VV G TG L G + V E
Sbjct: 345 EHFGIVPLEAMLRGVPVLAANNGGPTETVVEGETGWLRDPNDVGEWAKVMDKVLNGMGEE 404
Query: 243 RRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK 277
MGK+G ERVK F + MAER+ +++ + K
Sbjct: 405 ELKRMGKKGVERVKGRFADTQMAERLEEIIERMPK 439
|
Mannosylates Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 7 |
| >sp|Q8FSH1|MSHA_COREF D-inositol 3-phosphate glycosyltransferase OS=Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) GN=mshA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 87/214 (40%), Gaps = 23/214 (10%)
Query: 48 VVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFY 107
VV G L D +R RE LGV + A + + KG + +H+
Sbjct: 192 VVSPGADIALYTPGNDRATERSRRE-----LGVPLHAKVVAFVGRLQPFKGPQVLIHAVA 246
Query: 108 ESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLT---V 164
E LE ++ L V +I G E+ RN ++ + R+ F++ V
Sbjct: 247 ELLERDPQRNLRV-----LICGGPSGPSATPET-YRNLAVELGVDKRIRFLDPRPPEELV 300
Query: 165 APYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGK 224
A Y AA D++ S + E FG + +EA A PV+ GG V G TGLL
Sbjct: 301 AVYRAA-DIIAVPS--YNESFGLVAMEAQATGTPVVAARVGGLPVAVAEGETGLL----V 353
Query: 225 EGITP--LAKNIVKLATHVERRLTMGKRGYERVK 256
+G P A + L E R+ MG+ E +
Sbjct: 354 DGHDPALWADTLATLLDDDETRIRMGQDAVEHAR 387
|
Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) (taxid: 196164) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 0 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 284 | ||||||
| 224133786 | 481 | predicted protein [Populus trichocarpa] | 0.992 | 0.586 | 0.900 | 1e-149 | |
| 302142552 | 463 | unnamed protein product [Vitis vinifera] | 1.0 | 0.613 | 0.862 | 1e-144 | |
| 225458171 | 479 | PREDICTED: uncharacterized protein LOC10 | 1.0 | 0.592 | 0.862 | 1e-143 | |
| 356518559 | 464 | PREDICTED: uncharacterized protein LOC10 | 0.985 | 0.603 | 0.864 | 1e-142 | |
| 255538754 | 477 | glycosyltransferase, putative [Ricinus c | 0.989 | 0.589 | 0.868 | 1e-142 | |
| 255648383 | 463 | unknown [Glycine max] | 0.978 | 0.600 | 0.870 | 1e-141 | |
| 147771878 | 495 | hypothetical protein VITISV_033235 [Viti | 0.971 | 0.557 | 0.876 | 1e-140 | |
| 356564312 | 833 | PREDICTED: proteasome-activating nucleot | 0.975 | 0.332 | 0.866 | 1e-140 | |
| 449436130 | 472 | PREDICTED: uncharacterized protein LOC10 | 0.992 | 0.597 | 0.812 | 1e-136 | |
| 225431277 | 466 | PREDICTED: uncharacterized protein LOC10 | 0.992 | 0.605 | 0.829 | 1e-136 |
| >gi|224133786|ref|XP_002327680.1| predicted protein [Populus trichocarpa] gi|222836765|gb|EEE75158.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 532 bits (1370), Expect = e-149, Method: Compositional matrix adjust.
Identities = 254/282 (90%), Positives = 273/282 (96%)
Query: 1 MRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEV 60
MRGHYFKLDYVKHLPLV GAMIDSHVTAEYWKNRT+ERLRIKMP+TYVVHLGNSKELMEV
Sbjct: 197 MRGHYFKLDYVKHLPLVGGAMIDSHVTAEYWKNRTQERLRIKMPETYVVHLGNSKELMEV 256
Query: 61 AEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEV 120
AED+VAKRVLREH+RESLGVR+ED+LFAIINSVSRGKGQDLFL SFYESL++I+ KKL+V
Sbjct: 257 AEDSVAKRVLREHIRESLGVRDEDILFAIINSVSRGKGQDLFLRSFYESLQIIQVKKLKV 316
Query: 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA 180
PS+HAVI+GSDM+AQTKFE+ELRNYVMQK IQDRVHF+NKTLTVAPYLAAIDVLVQNSQA
Sbjct: 317 PSMHAVIVGSDMSAQTKFETELRNYVMQKNIQDRVHFINKTLTVAPYLAAIDVLVQNSQA 376
Query: 181 WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240
GECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLH VGKEG+TPLAKNIVKLATH
Sbjct: 377 RGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHSVGKEGVTPLAKNIVKLATH 436
Query: 241 VERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSKSH 282
VERRLTMGKRGYERV+E+F EHHMA RIA VLKEVL+KSKSH
Sbjct: 437 VERRLTMGKRGYERVREMFLEHHMAHRIASVLKEVLRKSKSH 478
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302142552|emb|CBI19755.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 515 bits (1327), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/284 (86%), Positives = 270/284 (95%)
Query: 1 MRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEV 60
MRGHYFKL+YVKHLP VAGAMIDSH TAEYWKNRTRERL IKMP+TYVVHLGNSKELME+
Sbjct: 179 MRGHYFKLEYVKHLPYVAGAMIDSHTTAEYWKNRTRERLGIKMPETYVVHLGNSKELMEI 238
Query: 61 AEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEV 120
AE+NVAKRVLREHVRESLGVRNEDLLFA+INSVSRGKGQDLFL SFY+SL+LIK +KL+V
Sbjct: 239 AENNVAKRVLREHVRESLGVRNEDLLFAVINSVSRGKGQDLFLRSFYQSLQLIKGRKLQV 298
Query: 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA 180
PS+HAVI+GSDMNAQTKFE+ELRN+V++ KIQD+VHF+NKTLTVAPYLA+IDVLVQNSQA
Sbjct: 299 PSIHAVIVGSDMNAQTKFETELRNFVVENKIQDQVHFINKTLTVAPYLASIDVLVQNSQA 358
Query: 181 WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240
GECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLH VGKEG+ PLA NIVKLAT+
Sbjct: 359 RGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHNVGKEGVKPLANNIVKLATN 418
Query: 241 VERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSKSHLY 284
VERRLTMGKRGYERVKE F EHHM+ERIA VLKEVLKK+++H +
Sbjct: 419 VERRLTMGKRGYERVKERFLEHHMSERIASVLKEVLKKAENHAF 462
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225458171|ref|XP_002281084.1| PREDICTED: uncharacterized protein LOC100257473 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/284 (86%), Positives = 270/284 (95%)
Query: 1 MRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEV 60
MRGHYFKL+YVKHLP VAGAMIDSH TAEYWKNRTRERL IKMP+TYVVHLGNSKELME+
Sbjct: 195 MRGHYFKLEYVKHLPYVAGAMIDSHTTAEYWKNRTRERLGIKMPETYVVHLGNSKELMEI 254
Query: 61 AEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEV 120
AE+NVAKRVLREHVRESLGVRNEDLLFA+INSVSRGKGQDLFL SFY+SL+LIK +KL+V
Sbjct: 255 AENNVAKRVLREHVRESLGVRNEDLLFAVINSVSRGKGQDLFLRSFYQSLQLIKGRKLQV 314
Query: 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA 180
PS+HAVI+GSDMNAQTKFE+ELRN+V++ KIQD+VHF+NKTLTVAPYLA+IDVLVQNSQA
Sbjct: 315 PSIHAVIVGSDMNAQTKFETELRNFVVENKIQDQVHFINKTLTVAPYLASIDVLVQNSQA 374
Query: 181 WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240
GECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLH VGKEG+ PLA NIVKLAT+
Sbjct: 375 RGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHNVGKEGVKPLANNIVKLATN 434
Query: 241 VERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSKSHLY 284
VERRLTMGKRGYERVKE F EHHM+ERIA VLKEVLKK+++H +
Sbjct: 435 VERRLTMGKRGYERVKERFLEHHMSERIASVLKEVLKKAENHAF 478
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356518559|ref|XP_003527946.1| PREDICTED: uncharacterized protein LOC100791337 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/280 (86%), Positives = 268/280 (95%)
Query: 1 MRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEV 60
MRGHYFK++YVKHLP VAGAMIDSH TAEYWKNRTRERL I+MP+TYVVHLGNSKELMEV
Sbjct: 184 MRGHYFKVEYVKHLPFVAGAMIDSHTTAEYWKNRTRERLGIEMPETYVVHLGNSKELMEV 243
Query: 61 AEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEV 120
AED+VAKRVLREHVRESLGVRN+DLLFAIINSVSRGKGQDLFL SFYESL+LI+EKKL++
Sbjct: 244 AEDSVAKRVLREHVRESLGVRNDDLLFAIINSVSRGKGQDLFLRSFYESLQLIQEKKLQL 303
Query: 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA 180
P +HAVI+GSDMNAQTKFE ELR +V++KKIQ+RVHFVNKTL VAPYLAAIDVLVQNSQA
Sbjct: 304 PFLHAVIVGSDMNAQTKFEMELRKFVVEKKIQNRVHFVNKTLAVAPYLAAIDVLVQNSQA 363
Query: 181 WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240
GECFGRITIEAMAF+LPVLGTAAGGT EIVVNGTTGLLHPVGKEG+TPLAKNIVKLA+H
Sbjct: 364 RGECFGRITIEAMAFRLPVLGTAAGGTMEIVVNGTTGLLHPVGKEGVTPLAKNIVKLASH 423
Query: 241 VERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSK 280
VE+RLTMGK+GYERVKE F EHHM++RIA+VLKEVL+K+K
Sbjct: 424 VEKRLTMGKKGYERVKERFLEHHMSQRIALVLKEVLQKAK 463
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255538754|ref|XP_002510442.1| glycosyltransferase, putative [Ricinus communis] gi|223551143|gb|EEF52629.1| glycosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/281 (86%), Positives = 265/281 (94%)
Query: 1 MRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEV 60
MRGHYFKL+YVKHLP VAGAMIDSH TAEYWKNRTRERL IKMP+TYVVHLGNSK+LMEV
Sbjct: 197 MRGHYFKLEYVKHLPFVAGAMIDSHTTAEYWKNRTRERLGIKMPETYVVHLGNSKDLMEV 256
Query: 61 AEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEV 120
AED+VAKRVL EHVRESLGVRN+DLLFAIINSVSRGKGQDLFL SFYESL+LI+EKKL+V
Sbjct: 257 AEDSVAKRVLCEHVRESLGVRNDDLLFAIINSVSRGKGQDLFLRSFYESLQLIQEKKLKV 316
Query: 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA 180
PS+HAV++GSDMNAQTKFE ELR +V +KKIQDRVHFVNKTLTVAPYLA+IDVLVQNSQA
Sbjct: 317 PSLHAVVVGSDMNAQTKFEMELRKFVQEKKIQDRVHFVNKTLTVAPYLASIDVLVQNSQA 376
Query: 181 WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240
GECFGRITIEAMAFQLPVLGTAAGGT EIVVNGTTGLLHP GKEG+TPLA NIVKLATH
Sbjct: 377 RGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPAGKEGVTPLANNIVKLATH 436
Query: 241 VERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSKS 281
VERRLTMGK GY+RVKE F EHHM+ RIA+VLKEVL+K+K+
Sbjct: 437 VERRLTMGKNGYKRVKERFLEHHMSHRIALVLKEVLRKAKT 477
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255648383|gb|ACU24642.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust.
Identities = 242/278 (87%), Positives = 264/278 (94%)
Query: 1 MRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEV 60
MRGHYFK++YVKHLP VAGAMIDSH TAEYWKNRTRERL IKMP+TYVVHLGNSKELMEV
Sbjct: 182 MRGHYFKVEYVKHLPFVAGAMIDSHTTAEYWKNRTRERLGIKMPETYVVHLGNSKELMEV 241
Query: 61 AEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEV 120
AED+VAKRVLREHVR+SLGVRN+DLLFAIINSVSRGKGQDLFL SFYESL LI+EKKL+V
Sbjct: 242 AEDSVAKRVLREHVRQSLGVRNDDLLFAIINSVSRGKGQDLFLRSFYESLMLIQEKKLQV 301
Query: 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA 180
PS+HA+++GSDMNAQTKFE+ELR +VM+KKIQDRVHFVNKTL VAPYLA+IDVLVQNSQA
Sbjct: 302 PSLHAIVVGSDMNAQTKFETELRQFVMEKKIQDRVHFVNKTLAVAPYLASIDVLVQNSQA 361
Query: 181 WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240
GECFGRITIEAMAF+LPVLGTAAGGT EIVVN TTGLLHPVGKEG+TPLAKNIV LATH
Sbjct: 362 RGECFGRITIEAMAFRLPVLGTAAGGTVEIVVNRTTGLLHPVGKEGVTPLAKNIVNLATH 421
Query: 241 VERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKK 278
VERRLTMGK+GYERVKE F E HMA+RIA+VLKEVL+K
Sbjct: 422 VERRLTMGKKGYERVKERFLEPHMAQRIALVLKEVLRK 459
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147771878|emb|CAN73426.1| hypothetical protein VITISV_033235 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust.
Identities = 242/276 (87%), Positives = 262/276 (94%)
Query: 1 MRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEV 60
MRGHYFKL+YVKHLP VAGAMIDSH TAEYWKNRTRERL IKMP+TYVVHLGNSKELME+
Sbjct: 195 MRGHYFKLEYVKHLPYVAGAMIDSHTTAEYWKNRTRERLGIKMPETYVVHLGNSKELMEI 254
Query: 61 AEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEV 120
AE+NVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFL SFY+SL+LIK +KL+V
Sbjct: 255 AENNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLRSFYQSLQLIKGRKLQV 314
Query: 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA 180
PS+HAVI+GSDMNAQTKFE+ELRN+V++ KIQD+VHF+NKTLTVAPYLA+IDVLVQNSQA
Sbjct: 315 PSIHAVIVGSDMNAQTKFETELRNFVVENKIQDQVHFINKTLTVAPYLASIDVLVQNSQA 374
Query: 181 WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240
GECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLH VGKEG+ PLA NIVKLAT+
Sbjct: 375 RGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHNVGKEGVKPLANNIVKLATN 434
Query: 241 VERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVL 276
VERRLTMGKRGYERVKE F EHHM+ERIA VLKE L
Sbjct: 435 VERRLTMGKRGYERVKERFLEHHMSERIASVLKEEL 470
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356564312|ref|XP_003550399.1| PREDICTED: proteasome-activating nucleotidase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 240/277 (86%), Positives = 263/277 (94%)
Query: 1 MRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEV 60
MRGHYFK++YVKHLP VAGAMIDSH TAEYWKNRTRERL IKMP+TYVVHLGNSKELMEV
Sbjct: 182 MRGHYFKVEYVKHLPFVAGAMIDSHTTAEYWKNRTRERLGIKMPETYVVHLGNSKELMEV 241
Query: 61 AEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEV 120
AED+VAKRVLREHVR+SLGVRN+DLLFAIINSVSRGKGQDLFL SFYESL LI+EKKL+V
Sbjct: 242 AEDSVAKRVLREHVRQSLGVRNDDLLFAIINSVSRGKGQDLFLRSFYESLMLIQEKKLQV 301
Query: 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA 180
PS+HA+++GSDMNAQTKFE+ELR +VM+KKIQDRVHFVNKTL VAPYLA+IDVLVQNSQA
Sbjct: 302 PSLHAIVVGSDMNAQTKFETELRQFVMEKKIQDRVHFVNKTLAVAPYLASIDVLVQNSQA 361
Query: 181 WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240
GECFGRITIEAMAF+LPVLGTAAGGT EIVVN TTGLLHPVGKEG+TPLAKNIV LATH
Sbjct: 362 RGECFGRITIEAMAFRLPVLGTAAGGTVEIVVNRTTGLLHPVGKEGVTPLAKNIVNLATH 421
Query: 241 VERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK 277
VERRLTMGK+GYERVKE F E HMA+RIA+VLKE+L+
Sbjct: 422 VERRLTMGKKGYERVKERFLEPHMAQRIALVLKELLQ 458
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449436130|ref|XP_004135847.1| PREDICTED: uncharacterized protein LOC101206589 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 491 bits (1265), Expect = e-136, Method: Compositional matrix adjust.
Identities = 229/282 (81%), Positives = 264/282 (93%)
Query: 1 MRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEV 60
MRG+YFK++YVKHLP VAGAMIDSH TAEYWKNRT +RL I+MP+TYVVHLGNSK+LMEV
Sbjct: 190 MRGNYFKVEYVKHLPFVAGAMIDSHTTAEYWKNRTWDRLGIQMPETYVVHLGNSKDLMEV 249
Query: 61 AEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEV 120
AE+NVAKRVLREH+RESLGVRNED+LFAIINSVSRGKGQDLFL +F++SL++I++KKL V
Sbjct: 250 AENNVAKRVLREHIRESLGVRNEDILFAIINSVSRGKGQDLFLRAFHQSLQMIQDKKLRV 309
Query: 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA 180
P +HAV++GSDMNA TKFE+ELRN+V + KIQDRVHFVNKTL+VAPYLA+IDVLVQNSQ
Sbjct: 310 PRIHAVVVGSDMNAHTKFETELRNFVNENKIQDRVHFVNKTLSVAPYLASIDVLVQNSQG 369
Query: 181 WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240
GECFGRITIEAMAFQLPVLGTAAGGT EIVVNGTTGLLHP GKEG+TPLA NIVKLATH
Sbjct: 370 RGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPAGKEGVTPLAHNIVKLATH 429
Query: 241 VERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSKSH 282
VERRLTMGK+GYERV+++F E HM +RIAVVLK+V++K+KSH
Sbjct: 430 VERRLTMGKKGYERVRQMFLEQHMMQRIAVVLKKVMEKAKSH 471
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225431277|ref|XP_002268739.1| PREDICTED: uncharacterized protein LOC100243789 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/282 (82%), Positives = 261/282 (92%)
Query: 1 MRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEV 60
++GHYF+L+YV+HLPLVA AMIDSHV AEYWK TR+ LRIKMPDTYVVHLGNSK+LM++
Sbjct: 182 IQGHYFQLEYVRHLPLVAAAMIDSHVAAEYWKTGTRDYLRIKMPDTYVVHLGNSKDLMDI 241
Query: 61 AEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEV 120
AED+VAKRVLREHVRESLGVR+ED+LFA+INSVSRGKGQDLFL SFYESL+LI +KKL V
Sbjct: 242 AEDSVAKRVLREHVRESLGVRDEDVLFAMINSVSRGKGQDLFLQSFYESLQLIIQKKLRV 301
Query: 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA 180
PS+HAVI+GSDM AQ KFES+LR++V KKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA
Sbjct: 302 PSMHAVIVGSDMTAQPKFESQLRDFVRVKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA 361
Query: 181 WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240
GECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG+TGLLHP GKEG+TPLAKNIV LAT+
Sbjct: 362 RGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGSTGLLHPTGKEGVTPLAKNIVTLATN 421
Query: 241 VERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSKSH 282
V RRLT+GK GYE+VKE F EHHMA RIA VLKEVL+K+KSH
Sbjct: 422 VHRRLTLGKTGYEKVKETFLEHHMAHRIATVLKEVLQKAKSH 463
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 284 | ||||||
| TAIR|locus:2018392 | 463 | AT1G75420 [Arabidopsis thalian | 0.947 | 0.580 | 0.795 | 6.8e-111 | |
| TAIR|locus:2013089 | 479 | AT1G19710 [Arabidopsis thalian | 0.947 | 0.561 | 0.774 | 2.7e-107 | |
| TAIR|locus:2093925 | 697 | AT3G15940 [Arabidopsis thalian | 0.489 | 0.199 | 0.432 | 1.4e-30 | |
| TAIR|locus:2018144 | 670 | AT1G52420 [Arabidopsis thalian | 0.489 | 0.207 | 0.390 | 3e-26 | |
| TIGR_CMR|BA_1558 | 381 | BA_1558 "glycosyl transferase, | 0.397 | 0.296 | 0.358 | 2.4e-09 | |
| TIGR_CMR|CHY_1134 | 378 | CHY_1134 "glycosyl transferase | 0.401 | 0.301 | 0.347 | 9.5e-09 | |
| TIGR_CMR|CPS_4999 | 367 | CPS_4999 "glycosyl transferase | 0.630 | 0.487 | 0.279 | 2e-08 | |
| UNIPROTKB|Q47WI9 | 364 | CPS_4182 "Putative lipopolysac | 0.588 | 0.458 | 0.271 | 1.4e-07 | |
| TIGR_CMR|CPS_4182 | 364 | CPS_4182 "putative lipopolysac | 0.588 | 0.458 | 0.271 | 1.4e-07 | |
| TIGR_CMR|CHY_1814 | 369 | CHY_1814 "glycosyltransferase, | 0.482 | 0.371 | 0.303 | 5.4e-07 |
| TAIR|locus:2018392 AT1G75420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1095 (390.5 bits), Expect = 6.8e-111, P = 6.8e-111
Identities = 214/269 (79%), Positives = 234/269 (86%)
Query: 1 MRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEV 60
MRGHYF D VKHLP VAGAMIDSH TA YWKNRT+ RL IKMP TYVVHLGNSKELMEV
Sbjct: 179 MRGHYFNADLVKHLPFVAGAMIDSHATAGYWKNRTQARLGIKMPKTYVVHLGNSKELMEV 238
Query: 61 AEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESXXXXXXXXXXV 120
AED+VAKRVLREHVRESLGVRNEDLLF IINSVSRGKGQDLFL +F+ES V
Sbjct: 239 AEDSVAKRVLREHVRESLGVRNEDLLFGIINSVSRGKGQDLFLRAFHESLERIKEKKLQV 298
Query: 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA 180
P++HAV++GSDM+ QTKFE+ELRN+V +KK+++ VHFVNKTLTVAPY+AAIDVLVQNSQA
Sbjct: 299 PTMHAVVVGSDMSKQTKFETELRNFVREKKLENFVHFVNKTLTVAPYIAAIDVLVQNSQA 358
Query: 181 WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240
GECFGRITIEAMAF+LPVLGTAAGGT EIVVNGTTGLLH GKEG+ PLAKNIVKLAT
Sbjct: 359 RGECFGRITIEAMAFKLPVLGTAAGGTMEIVVNGTTGLLHSAGKEGVIPLAKNIVKLATQ 418
Query: 241 VERRLTMGKRGYERVKEIFQEHHMAERIA 269
VE RL MGK GYERVKE+F EHHM+ RIA
Sbjct: 419 VELRLRMGKNGYERVKEMFLEHHMSHRIA 447
|
|
| TAIR|locus:2013089 AT1G19710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1061 (378.5 bits), Expect = 2.7e-107, P = 2.7e-107
Identities = 209/270 (77%), Positives = 232/270 (85%)
Query: 1 MRGHYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEV 60
MRGHYFK D VKHLP VAGAMIDSH TAEYWKNRT +RL IKMP TYVVHLGNSKELMEV
Sbjct: 189 MRGHYFKPDLVKHLPFVAGAMIDSHATAEYWKNRTHDRLGIKMPKTYVVHLGNSKELMEV 248
Query: 61 AEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESXXXXXXXXXX- 119
AED+ AK VLRE VRESLGVRNED+LF IINSVSRGKGQDLFL +F+ES
Sbjct: 249 AEDSFAKNVLREQVRESLGVRNEDILFGIINSVSRGKGQDLFLRAFHESLKVIKETKKLE 308
Query: 120 VPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQ 179
VP++HAV++GSDM+AQTKFE+ELRN+V + K+Q VHFVNKT+ VAPYLAAIDVLVQNSQ
Sbjct: 309 VPTMHAVVVGSDMSAQTKFETELRNFVQEMKLQKIVHFVNKTMKVAPYLAAIDVLVQNSQ 368
Query: 180 AWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT 239
A GECFGRITIEAMAF+LPVLGTAAGGT EIVVN TTGLLH GK+G+ PLAKNIVKLAT
Sbjct: 369 ARGECFGRITIEAMAFKLPVLGTAAGGTMEIVVNRTTGLLHNTGKDGVLPLAKNIVKLAT 428
Query: 240 HVERRLTMGKRGYERVKEIFQEHHMAERIA 269
+V+ R TMGK+GYERVKE+F EHHM+ RIA
Sbjct: 429 NVKMRNTMGKKGYERVKEMFLEHHMSHRIA 458
|
|
| TAIR|locus:2093925 AT3G15940 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 275 (101.9 bits), Expect = 1.4e-30, Sum P(3) = 1.4e-30
Identities = 61/141 (43%), Positives = 88/141 (62%)
Query: 128 IGSDMNAQTKFESELRNYVMQK-KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFG 186
+GS N + + E+ +++ + + V + T VA +A DV V NSQ GE FG
Sbjct: 547 VGSKSN-KVAYVKEMLSFLSNNGNLSNSVLWTPATTRVASLYSAADVYVTNSQGVGETFG 605
Query: 187 RITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLT 246
R+TIEAMA+ LPVLGT AGGT EIV + TGLLHPVG+ G LA+N++ L + RL
Sbjct: 606 RVTIEAMAYGLPVLGTDAGGTKEIVEHNVTGLLHPVGRAGNKVLAQNLLFLLRNPSTRLQ 665
Query: 247 MGKRGYERVKEIFQEHHMAER 267
+G +G E V++++ + HM +R
Sbjct: 666 LGSQGREIVEKMYMKQHMYKR 686
|
|
| TAIR|locus:2018144 AT1G52420 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 248 (92.4 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 55/141 (39%), Positives = 84/141 (59%)
Query: 128 IGSDMNAQTKFESELRNYVMQK-KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFG 186
+GS N + + E+ +++ + V + T VA +A DV V NSQ GE FG
Sbjct: 520 VGSKSN-KVGYVKEMLSFLSNSGNLSKSVMWTPATTRVASLYSAADVYVTNSQGVGETFG 578
Query: 187 RITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLT 246
R+TIEAMA+ L V+GT AGGT E+V + TGLLH +G+ G LA N++ L + + RL
Sbjct: 579 RVTIEAMAYGLAVVGTDAGGTKEMVQHNMTGLLHSMGRSGNKELAHNLLYLLRNPDERLR 638
Query: 247 MGKRGYERVKEIFQEHHMAER 267
+G G + V++++ + HM +R
Sbjct: 639 LGSEGRKMVEKMYMKQHMYKR 659
|
|
| TIGR_CMR|BA_1558 BA_1558 "glycosyl transferase, group 1 family protein" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 159 (61.0 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 42/117 (35%), Positives = 62/117 (52%)
Query: 151 IQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEI 210
I+DRV F+ K VA LA D+++ S+ E FG + +EAMA +P +GT GG E+
Sbjct: 252 IEDRVLFLGKQDNVAELLAMSDLMLLLSEK--ESFGLVLLEAMACGVPCIGTRVGGIPEV 309
Query: 211 VVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAER 267
+ +G TG L VG T +A ++L E MG+R E V E F+ + +
Sbjct: 310 IQHGDTGYLCEVGDT--TGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQ 364
|
|
| TIGR_CMR|CHY_1134 CHY_1134 "glycosyl transferase, group 1 family" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 154 (59.3 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 41/118 (34%), Positives = 63/118 (53%)
Query: 144 NYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA 203
N V +K + ++V F+ K V+ L+ DVL+ S+ E FG + +EAMA ++PV+
Sbjct: 247 NEVQKKNLTNKVKFLGKMPKVSDVLSISDVLLITSET--ESFGLVALEAMAMEVPVVAYR 304
Query: 204 AGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQE 261
GG E+VV+G TG L V + A+ +VKL + G+ G R KE F +
Sbjct: 305 VGGLPEVVVDGQTGYL--VDYLDLEKAAEAVVKLLKEPWLKRDFGRWGRIRAKERFSK 360
|
|
| TIGR_CMR|CPS_4999 CPS_4999 "glycosyl transferase, group 1 family protein" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 151 (58.2 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 54/193 (27%), Positives = 84/193 (43%)
Query: 75 RESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVIIGSDMNA 134
R LG+ + L+ I + KG H ++ +P++H I G D A
Sbjct: 179 RADLGIPLDQLMLLSIGHLGEIKG-----HQ--DTLVALSKFTKTMPALHLYIAG-DGAA 230
Query: 135 QTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMA 194
Q K +L V + +I + V F+ + +L A D+ +Q S E FG + +EA A
Sbjct: 231 QEK--QKLTELVNKLQINENVTFLGQINNAFSWLEACDIFIQPSVE--EAFGLVFVEAGA 286
Query: 195 FQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYER 254
PV+ T GG EI+V+ TGLL V + + L R G+ GY+R
Sbjct: 287 KAKPVIATTVGGIKEIIVSKETGLL--VLPSSPKAVEHALAILINSPPLRQQYGENGYKR 344
Query: 255 VKEIFQEHHMAER 267
+ E F +M +
Sbjct: 345 ITEHFSLTNMVNK 357
|
|
| UNIPROTKB|Q47WI9 CPS_4182 "Putative lipopolysaccharide core biosynthesis mannosyltransferase" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 144 (55.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 50/184 (27%), Positives = 86/184 (46%)
Query: 88 AIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVIIGSDMNAQTKFESELRNYVM 147
AI+ V + KG LF+ S + P AVI+GS ++ F +EL++ +
Sbjct: 185 AILGRVRKQKGVHLFVESCIDILKDR-------PDYTAVIVGSISSSNESFVNELQSKID 237
Query: 148 QKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG 205
Q + +R+ F + + +++ ++V S+ E FG +EAM+ VL + AG
Sbjct: 238 QAGLTERIVFAGEQNFADIPKIFSSLSLVVALSE--NEGFGLTILEAMSSGAAVLASEAG 295
Query: 206 GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMA 265
E+V G G + P+ + + + + L E+ + MG+ G ERV E H+
Sbjct: 296 AWPEVVRQGVDGYVVPIND--LDAVTEKMSLLLADEEKLMQMGRDGRERVLE----HYSV 349
Query: 266 ERIA 269
ER A
Sbjct: 350 EREA 353
|
|
| TIGR_CMR|CPS_4182 CPS_4182 "putative lipopolysaccharide core biosynthesis mannosyltransferase" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 144 (55.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 50/184 (27%), Positives = 86/184 (46%)
Query: 88 AIINSVSRGKGQDLFLHSFYESXXXXXXXXXXVPSVHAVIIGSDMNAQTKFESELRNYVM 147
AI+ V + KG LF+ S + P AVI+GS ++ F +EL++ +
Sbjct: 185 AILGRVRKQKGVHLFVESCIDILKDR-------PDYTAVIVGSISSSNESFVNELQSKID 237
Query: 148 QKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG 205
Q + +R+ F + + +++ ++V S+ E FG +EAM+ VL + AG
Sbjct: 238 QAGLTERIVFAGEQNFADIPKIFSSLSLVVALSE--NEGFGLTILEAMSSGAAVLASEAG 295
Query: 206 GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMA 265
E+V G G + P+ + + + + L E+ + MG+ G ERV E H+
Sbjct: 296 AWPEVVRQGVDGYVVPIND--LDAVTEKMSLLLADEEKLMQMGRDGRERVLE----HYSV 349
Query: 266 ERIA 269
ER A
Sbjct: 350 EREA 353
|
|
| TIGR_CMR|CHY_1814 CHY_1814 "glycosyltransferase, group 1 family" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 139 (54.0 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 44/145 (30%), Positives = 71/145 (48%)
Query: 123 VHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWG 182
V IIG D ++EL+ + I+ V F A + ID+ V S + G
Sbjct: 223 VFRAIIGGD----GPLKNELKELAKELGIESLVTFPGYIPNPAEFYREIDIFVLPSISEG 278
Query: 183 ECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVE 242
+EAM+++L V+ T GG E++ +G GLL P K+ T L + + L +
Sbjct: 279 LPLS--LLEAMSWKLAVIATNVGGIPEVINSGENGLLVPP-KDA-TALTEALYTLIFNEN 334
Query: 243 RRLTMGKRGYERVKEIFQEHHMAER 267
RL++G+R Y ++E + HMA+R
Sbjct: 335 FRLSLGERAYITIREKYNVAHMAQR 359
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
 |
 |
 |
 |
 |
 |
 |
 |
||
 | eugene3.00570137 | hypothetical protein (481 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 284 | |||
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 1e-28 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 5e-24 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 1e-19 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 1e-19 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 4e-17 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 8e-17 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 4e-16 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 4e-16 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 8e-16 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 1e-15 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 2e-15 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 8e-15 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 1e-14 | |
| cd03822 | 366 | cd03822, GT1_ecORF704_like, This family is most cl | 9e-14 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 7e-13 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 1e-12 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 3e-12 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 1e-11 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 2e-11 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 2e-11 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 3e-11 | |
| cd03805 | 392 | cd03805, GT1_ALG2_like, This family is most closel | 6e-11 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 1e-10 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 1e-10 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 3e-10 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 6e-10 | |
| cd03813 | 475 | cd03813, GT1_like_3, This family is most closely r | 2e-08 | |
| PRK15484 | 380 | PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety | 3e-08 | |
| TIGR04157 | 406 | TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG | 1e-07 | |
| TIGR03449 | 405 | TIGR03449, mycothiol_MshA, D-inositol-3-phosphate | 3e-07 | |
| cd03792 | 372 | cd03792, GT1_Trehalose_phosphorylase, Trehalose ph | 1e-06 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 2e-06 | |
| PLN02871 | 465 | PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu | 6e-06 | |
| cd03802 | 335 | cd03802, GT1_AviGT4_like, This family is most clos | 8e-05 | |
| cd04946 | 407 | cd04946, GT1_AmsK_like, This family is most closel | 2e-04 | |
| TIGR02470 | 784 | TIGR02470, sucr_synth, sucrose synthase | 4e-04 | |
| PRK15490 | 578 | PRK15490, PRK15490, Vi polysaccharide biosynthesis | 7e-04 | |
| cd03804 | 351 | cd03804, GT1_wbaZ_like, This family is most closel | 7e-04 | |
| pfam13524 | 92 | pfam13524, Glyco_trans_1_2, Glycosyl transferases | 0.001 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 0.002 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 0.002 | |
| TIGR04063 | 397 | TIGR04063, stp3, PEP-CTERM/exosortase A-associated | 0.002 | |
| PLN00142 | 815 | PLN00142, PLN00142, sucrose synthase | 0.003 | |
| PRK15179 | 694 | PRK15179, PRK15179, Vi polysaccharide biosynthesis | 0.003 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 1e-28
Identities = 71/247 (28%), Positives = 103/247 (41%), Gaps = 27/247 (10%)
Query: 29 EYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFA 88
E + RE + V+ G ++ A R R LG+ ++ +
Sbjct: 153 EATREELRELGGVPPEKITVIPNG-----VDTERFRPAPR----AARRRLGIPEDEPVIL 203
Query: 89 IINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQ 148
+ + KG DL L E+L +++ E P V VI+G EL +
Sbjct: 204 FVGRLVPRKGVDLLL----EALAKLRK---EYPDVRLVIVGDG-----PLREELEALAAE 251
Query: 149 KKIQDRVHFVNKTL--TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG 206
+ DRV F+ + AA DV V S E FG + +EAMA LPV+ + GG
Sbjct: 252 LGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLY--EGFGLVLLEAMAAGLPVVASDVGG 309
Query: 207 TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAE 266
E+V +G TGLL P G LA+ I++L E R +G+ ERV E F +A
Sbjct: 310 IPEVVEDGETGLLVPPGDP--EALAEAILRLLDDPELRRRLGEAARERVAERFSWDRVAA 367
Query: 267 RIAVVLK 273
R V
Sbjct: 368 RTEEVYY 374
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 99.2 bits (248), Expect = 5e-24
Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 97 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ---- 152
KG D L E+ ++K K P+V +++G + + N +I+
Sbjct: 201 KGIDELL----EAARILKAKG---PNVRLLLVG---------DGDEENPAAILEIEKLGL 244
Query: 153 -DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIV 211
RV F+ V LAA DV V S + E R+ +EAMA PV+ T G E V
Sbjct: 245 EGRVEFLGFRDDVPELLAAADVFVLPS--YREGLPRVLLEAMAMGRPVIATDVPGCREAV 302
Query: 212 VNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERI 268
++G G L P G LA I +L E R MG+ +R +E F E + +++
Sbjct: 303 IDGVNGFLVPPGDA--EALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVKKL 357
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 87.3 bits (217), Expect = 1e-19
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 12/194 (6%)
Query: 66 AKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHA 125
+R+L + + + ++R KGQ++F+ E+L +K+ + P VH
Sbjct: 169 PERILAL--AREWPLPKGKPVILLPGRLTRWKGQEVFI----EALARLKK---DDPDVHL 219
Query: 126 VIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECF 185
+I+G + + +EL + + +QDRV FV + A D++V S E F
Sbjct: 220 LIVGDA-QGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYALADIVVSASTE-PEAF 277
Query: 186 GRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRL 245
GR +EA A PV+ + GG E V G TGLL P G A + + E R
Sbjct: 278 GRTAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLL-PEGRA 336
Query: 246 TMGKRGYERVKEIF 259
M + V+ +F
Sbjct: 337 KMFAKARMCVETLF 350
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 87.0 bits (216), Expect = 1e-19
Identities = 61/183 (33%), Positives = 88/183 (48%), Gaps = 24/183 (13%)
Query: 97 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH 156
KG D + E+L + +K+ P VH VI+G L + ++DRV
Sbjct: 215 KGIDYLI----EALARLLKKR---PDVHLVIVGDG-----PLREALEALAAELGLEDRVT 262
Query: 157 FV----NKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVV 212
F+ ++ V Y AA DV V S E FG + +EAMA LPV+ T GG EI+
Sbjct: 263 FLGAVPHEE--VPAYYAAADVFVLPS--LREGFGLVLLEAMACGLPVVATDVGGIPEIIT 318
Query: 213 NGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL 272
+G GLL P G LA+ I++L R +G+ RV E F ++AER+ +
Sbjct: 319 DGENGLLVPPG--DPEALAEAILRLLADPWLR--LGRAARRRVAERFSWENVAERLLELY 374
Query: 273 KEV 275
+EV
Sbjct: 375 REV 377
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 79.7 bits (197), Expect = 4e-17
Identities = 51/169 (30%), Positives = 71/169 (42%), Gaps = 15/169 (8%)
Query: 94 SRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQD 153
S KG D + +F + E P VI+G EL + + D
Sbjct: 199 SPQKGFDTLIRAFALL-------RKEGPDARLVILGDG-----PLREELEALAKELGLAD 246
Query: 154 RVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN 213
RVHF+ PYL A D+ V +S+ E F + +EAMA PV+ T G EI+ +
Sbjct: 247 RVHFLGFQSNPYPYLKAADLFVLSSRY--EGFPNVLLEAMALGTPVVATDCPGPREILED 304
Query: 214 GTTGLLHPVGKEGI-TPLAKNIVKLATHVERRLTMGKRGYERVKEIFQE 261
G GLL PVG E A ++ L E R + ERV + +
Sbjct: 305 GENGLLVPVGDEAALAAAALALLDLLLDPELRERLAAAARERVAREYSK 353
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 79.2 bits (194), Expect = 8e-17
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 17/200 (8%)
Query: 82 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESE 141
+ + + KG DL + E + K P + VI+G + E
Sbjct: 197 GGKFVVLYVGRLDPEKGLDLLI-------EAAAKLKKRGPDIKLVIVGD----GPERREE 245
Query: 142 LRNYVMQKKIQDRVHFVN--KTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPV 199
L + ++D V F+ +A LA+ DV V S E FG + +EAMA PV
Sbjct: 246 LEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSL--SEGFGLVLLEAMAAGTPV 303
Query: 200 LGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIF 259
+ + GG E+V +G TGLL V + LA + +L E R +G+ ERV+E F
Sbjct: 304 IASDVGGIPEVVEDGETGLL--VPPGDVEELADALEQLLEDPELREELGEAARERVEEEF 361
Query: 260 QEHHMAERIAVVLKEVLKKS 279
+AE++ + +E+L +
Sbjct: 362 SWERIAEQLLELYEELLAEK 381
|
Length = 381 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 77.2 bits (191), Expect = 4e-16
Identities = 49/151 (32%), Positives = 69/151 (45%), Gaps = 12/151 (7%)
Query: 119 EVPSVHAVIIGS-DMNAQTKFESELRNYVMQKKIQDRVHFVNKTL--TVAPYLAAIDVLV 175
+P VI+G + E+EL + DRV F+ + A LAA DV V
Sbjct: 215 ALPDAPLVIVGEGPL------EAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFV 268
Query: 176 QNSQAWGECFGRITIEAMAFQLPVLGTA-AGGTTEIVVNGTTGLLHPVGKEGITPLAKNI 234
S E FG + +EAMAF PV+ T G + + ++G TGL+ P G LA+ I
Sbjct: 269 FPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPA--ALAEAI 326
Query: 235 VKLATHVERRLTMGKRGYERVKEIFQEHHMA 265
+L E R +G+ ER +E F M
Sbjct: 327 RRLLEDPELRERLGEAARERAEEEFTADRMV 357
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 76.9 bits (190), Expect = 4e-16
Identities = 54/198 (27%), Positives = 87/198 (43%), Gaps = 19/198 (9%)
Query: 71 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS 130
R +RE LG+ + L I+ + K L + L+ +K P+ +++G
Sbjct: 180 RARLREELGLPEDTFLIGIVARLHPQKDHATLLRAA----ALLLKK---FPNARLLLVGD 232
Query: 131 DMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITI 190
+ + E + ++D+V + + V L A+DV V +S + E F + +
Sbjct: 233 GPD-RANLELLALK---ELGLEDKVILLGERSDVPALLNALDVFVLSSLS--EGFPNVLL 286
Query: 191 EAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVG-KEGITPLAKNIVKLATHVERRLTMGK 249
EAMA LPV+ T G E+V + TG L P G E LA+ I L R +G+
Sbjct: 287 EAMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEA---LAEAIEALLADPALRQALGE 341
Query: 250 RGYERVKEIFQEHHMAER 267
ER++E F M E
Sbjct: 342 AARERIEENFSIEAMVEA 359
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 76.1 bits (188), Expect = 8e-16
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 139 ESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLP 198
S + +QD V F+ K V L+ D+ + S+ E FG +EAMA +P
Sbjct: 239 RSPAERLARELGLQDDVLFLGKQDHVEELLSIADLFLLPSEK--ESFGLAALEAMACGVP 296
Query: 199 VLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEI 258
V+ + AGG E+V +G TG L VG + +A+ + L E + R E
Sbjct: 297 VVASNAGGIPEVVKHGETGFLVDVGD--VEAMAEYALSLLEDDELWQEFSRAARNRAAER 354
Query: 259 FQEHHMAERI 268
F +ERI
Sbjct: 355 FD----SERI 360
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 75.7 bits (187), Expect = 1e-15
Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 140 SELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPV 199
S V + + DRV F+ K VA L+ D+ + S+ E FG +EAMA +PV
Sbjct: 242 SPAEQLVRELGLTDRVLFLGKQDDVAELLSISDLFLLPSEK--ESFGLAALEAMACGVPV 299
Query: 200 LGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIF 259
+ + AGG E+V +G TG L VG + +A+ + L E ER KE F
Sbjct: 300 IASNAGGIPEVVEHGVTGFLCDVGD--VETMAEYAISLLEDEELLQRFSAAARERAKERF 357
Query: 260 QEHHMAERIAVVLKEVL 276
+ + + + +L
Sbjct: 358 DSEKIVPQYEALYRRLL 374
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 71.5 bits (176), Expect = 2e-15
Identities = 56/171 (32%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 89 IINSVSRG---KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNY 145
II V R KG DL L E+ L+KE+ P++ VI+G + E +L+
Sbjct: 4 IILFVGRLVPEKGLDLLL----EAFALLKEQH---PNLKLVIVGDG-----EEEKKLKKL 51
Query: 146 VMQKKIQDRVHFVN--KTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA 203
++ ++D V FV + D+ V S+ E FG + +EAMA +PV+ T
Sbjct: 52 ALKLGLEDNVIFVGFVPDEDLIELYRIADLFVLPSRY--EGFGLVLLEAMAAGVPVIATD 109
Query: 204 AGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYER 254
GG EIV +G TGLL G LA+ I KL E R +G+ +R
Sbjct: 110 VGGPAEIVKDGETGLLVDPGD--AEALAEAIEKLLKDEELRERLGENARKR 158
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 73.0 bits (180), Expect = 8e-15
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 17/162 (10%)
Query: 97 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH 156
KG DL + ++ + + + KL I+G L + + ++DRV
Sbjct: 191 KGFDLLIEAWAKIAKKHPDWKL-------RIVGDG-----PEREALEALIKELGLEDRVI 238
Query: 157 FVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA-GGTTEIVVNGT 215
+ T + Y A + V S+ E F + +EAMAF LPV+ G +EI+ +G
Sbjct: 239 LLGFTKNIEEYYAKASIFVLTSRF--EGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGV 296
Query: 216 TGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKE 257
GLL P G LA+ +++L E R MG E +
Sbjct: 297 NGLLVPNGDVEA--LAEALLRLMEDEELRKRMGANARESAER 336
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 73.0 bits (180), Expect = 1e-14
Identities = 56/179 (31%), Positives = 77/179 (43%), Gaps = 21/179 (11%)
Query: 89 IINSVSR---GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIG--SDMNAQTKFESELR 143
I +V R KG D + ++ E EL + L VI+G D E ELR
Sbjct: 222 RILAVGRLDPRKGIDTLIRAYAELPELRERANL-------VIVGGPRDDILAMD-EEELR 273
Query: 144 NYVMQKKIQDRVHFVNKTLT---VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 200
+ + DRV F ++ + A DV V A E FG +EAMA LPV+
Sbjct: 274 ELARELGVIDRVDFP-GRVSREDLPALYRAADVFVN--PALYEPFGLTALEAMACGLPVV 330
Query: 201 GTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIF 259
TA GG +IVV+G TGLL LA + +L T R + + G R + +
Sbjct: 331 ATAVGGPRDIVVDGVTGLLVDPRDPEA--LAAALRRLLTDPALRRRLSRAGLRRARARY 387
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 70.4 bits (173), Expect = 9e-14
Identities = 61/262 (23%), Positives = 100/262 (38%), Gaps = 50/262 (19%)
Query: 38 RLRIKMPDTYVVHLGN-SKELMEVA-EDNVAK---------RVLREHVRESLGVRNEDLL 86
RL ++ D +V + L+ A + +A E ++ G+ +L
Sbjct: 129 RLLLRRADAVIVMSSELLRALLLRAYPEKIAVIPHGVPDPPAEPPESLKALGGLDGRPVL 188
Query: 87 --FAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRN 144
F ++ KG +L L E+L L+ K P V ++ G ++ E
Sbjct: 189 LTFGLL---RPYKGLELLL----EALPLLVAK---HPDVRLLVAGETHPDLERYRGEAYA 238
Query: 145 YVMQKKIQDRVHFVNKTLT---VAPYLAAIDVLV------QNSQ----AWGECFGRITIE 191
+ + DRV F+N+ L + +A DV+V +Q A+
Sbjct: 239 LAERLGLADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAY---------- 288
Query: 192 AMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRG 251
A+ F PV+ T G E V++G TGLL P G LA+ I +L E + R
Sbjct: 289 AIGFGKPVISTPVGHAEE-VLDGGTGLLVPPGDP--AALAEAIRRLLADPELAQALRARA 345
Query: 252 YERVKEIFQEHHMAERIAVVLK 273
E + +AER +L
Sbjct: 346 REYARA-MSWERVAERYLRLLA 366
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 67.3 bits (165), Expect = 7e-13
Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 22/160 (13%)
Query: 97 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH 156
KG DL L E+ + + +E+ VI+G+ + + + + RV
Sbjct: 204 KGVDLLL----EAFKRLPRGDIEL-----VIVGNGLELEEESYEL--------EGDPRVE 246
Query: 157 FV--NKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG 214
F+ + + A IDVLV S W E F + EA+A +PV+ + GG E+V +G
Sbjct: 247 FLGAYPQEEIDDFYAEIDVLVVPSI-WPENFPLVIREALAAGVPVIASDIGGMAELVRDG 305
Query: 215 TTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYER 254
GLL P G LA + +L + +
Sbjct: 306 VNGLLFPPG--DAEDLAAALERLIDDPDLLERLRAGIEPP 343
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 66.9 bits (164), Expect = 1e-12
Identities = 51/182 (28%), Positives = 77/182 (42%), Gaps = 25/182 (13%)
Query: 96 GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS-DMNAQTKFESELRNYVMQKKIQDR 154
G+ Q L + E+ L+K++ P + +I+G + EL+ + D
Sbjct: 230 GRAQGL--DTLLEAAALLKDR----PDIRFLIVGDGPE------KEELKELAKALGL-DN 276
Query: 155 VHF---VNKTLTVAPYLAAIDVLVQNSQAWGECFGRIT----IEAMAFQLPVLGTAAGGT 207
V F V K + LAA DV + G F ++ E MA PVL + G +
Sbjct: 277 VTFLGRVPKE-ELPELLAAADVGL-VPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGES 334
Query: 208 TEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAER 267
E+V GL+ P G LA I++L E R MG+ G V+E F +AER
Sbjct: 335 AELVEEAGAGLVVPPGD--PEALAAAILELLDDPEERAEMGENGRRYVEEKFSREKLAER 392
Query: 268 IA 269
+
Sbjct: 393 LL 394
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 3e-12
Identities = 55/177 (31%), Positives = 76/177 (42%), Gaps = 20/177 (11%)
Query: 97 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH 156
KG D L E+L L+K++ ++ I+G EL + + ++DRV
Sbjct: 192 KGLDYLL----EALALLKDRGIDF---RLDIVGDG-----PLRDELEALIAELGLEDRVT 239
Query: 157 FVNKTL--TVAPYLAAIDVLVQNSQAWG----ECFGRITIEAMAFQLPVLGTAAGGTTEI 210
+ V L A D+ V S E + +EAMA LPV+ T G E+
Sbjct: 240 LLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPEL 299
Query: 211 VVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAER 267
V +G TGLL P G LA I +L E R MG+ G RV+E F A R
Sbjct: 300 VEDGETGLLVPPGD--PEALADAIERLLDDPELRREMGEAGRARVEEEFDIRKQAAR 354
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 1e-11
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 29/214 (13%)
Query: 67 KRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAV 126
+ V + R LG+ ++ + + +++ K D + +F L+ E P V V
Sbjct: 185 EPVDGDDERRKLGIPEDEPVLLYVGRLAKEKNIDFLIRAFARLLK-------EEPDVKLV 237
Query: 127 IIGSDMNAQTKFESELRNYVMQKKIQDRVHFV-----NKTLTVAPYLAAIDVLVQNSQAW 181
I+G D EL + + DRV F + + Y A D+ V S
Sbjct: 238 IVG-DGPE----REELEELARELGLADRVIFTGFVPREE---LPDYYKAADLFVFASTT- 288
Query: 182 GECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHV 241
E G + +EAMA LPV+ A G ++V +G G L P G E LA+ +++L
Sbjct: 289 -ETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE---ALAEALLRLLQDP 344
Query: 242 ERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEV 275
E R + K E + + A+++ + +EV
Sbjct: 345 ELRRRLSKNAEESAE----KFSFAKKVEKLYEEV 374
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 63.4 bits (155), Expect = 2e-11
Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 15/157 (9%)
Query: 120 VPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQN 177
VP V VIIG + L + RV F+ V + + +Q
Sbjct: 217 VPEVRLVIIG-----DGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQP 271
Query: 178 SQ--AWGEC--FGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEG-ITPLAK 232
S G+ + +EA A +PV+ T GG E V +G TGLL P EG + LA
Sbjct: 272 SVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVP---EGDVAALAA 328
Query: 233 NIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIA 269
+ +L + R MG G RV+E F ++
Sbjct: 329 ALGRLLADPDLRARMGAAGRRRVEERFDLRRQTAKLE 365
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 63.4 bits (155), Expect = 2e-11
Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 29/203 (14%)
Query: 71 REHVRESLGVRNED---LLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVI 127
+ R+ LG+ D +LF + KG D + E+L+ + E+ + + V+
Sbjct: 178 KREARKRLGL-PADKKIILFGAVGGTDPRKGFDELI----EALKRLAERWKD--DIELVV 230
Query: 128 IGSDMNAQTKFESELRNYVMQKKIQDRVHF---VNKTLTVAPYLAAIDVLVQNSQAWGEC 184
G+ + + + VH+ +N ++A +A DV V S E
Sbjct: 231 FGAS-DPEIPPDLPFP-----------VHYLGSLNDDESLALIYSAADVFVVPSLQ--EN 276
Query: 185 FGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERR 244
F IEA+A PV+ GG +IV +G TG L G LA+ I L + R
Sbjct: 277 FPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGD--PEDLAEGIEWLLADPDER 334
Query: 245 LTMGKRGYERVKEIFQEHHMAER 267
+G+ E + F A+R
Sbjct: 335 EELGEAARELAENEFDSRVQAKR 357
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 3e-11
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 27/187 (14%)
Query: 69 VLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII 128
R +R +LGV+N+ + + + K L +F + L + KL +I
Sbjct: 173 ARRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKL-------LIA 225
Query: 129 GSDMNAQTKFESELRNYVMQK----KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGEC 184
G + LR + + + +RV + +A Y A D+ V +S AW E
Sbjct: 226 G---------DGPLRATLERLIKALGLSNRVKLLGLRDDIAAYYNAADLFVLSS-AW-EG 274
Query: 185 FGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH-VER 243
FG + EAMA +LPV+ T AGG E+V G +GL+ P+ LA I ++ E
Sbjct: 275 FGLVVAEAMACELPVVATDAGGVREVV--GDSGLIVPISD--PEALANKIDEILKMSGEE 330
Query: 244 RLTMGKR 250
R +G R
Sbjct: 331 RDIIGAR 337
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 61.8 bits (151), Expect = 6e-11
Identities = 56/190 (29%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 90 INSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDM-----NAQTKFESELRN 144
IN R K L + +F ++K+K E +V VI G N + E EL+
Sbjct: 217 INRFERKKNIALAIEAF----AILKDKLAEFKNVRLVIAGGYDPRVAENVEY-LE-ELQR 270
Query: 145 YVMQKK-IQDRVHF---VNKTLTVAPYLAAIDVLV--QNSQAWGECFGRITIEAMAFQLP 198
+ ++D+V F ++ + +A +L N E FG + +EAM P
Sbjct: 271 LAEELLLLEDQVIFLPSISDSQKELLLSSARALLYTPSN-----EHFGIVPLEAMYAGKP 325
Query: 199 VLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEI 258
V+ +GG E VV+G TG L E A+ ++KLA + MG G +RVKE
Sbjct: 326 VIACNSGGPLETVVDGETGFLCEPTPEE---FAEAMLKLANDPDLADRMGAAGRKRVKEK 382
Query: 259 FQEHHMAERI 268
F AER+
Sbjct: 383 FSTEAFAERL 392
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 61.1 bits (149), Expect = 1e-10
Identities = 32/93 (34%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 163 TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPV 222
+A A+ DV V S+ E FG + +EAMA LPV+ AGG +IV +G GLL
Sbjct: 259 ELAAAYASADVFVFPSRT--ETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEP 316
Query: 223 GKEGITPLAKNIVKLATHVERRLTMGKRGYERV 255
G A + L E R M R
Sbjct: 317 GDAE--AFAAALAALLADPELRRRMAARARAEA 347
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 1e-10
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 155 VHFVNKTLT---VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIV 211
+ ++NK L + L+ +V V S E G + +EAMA PV+ +A GG E+V
Sbjct: 262 IIWINKMLPKEELVELLSNAEVFVCPSIY--EPLGIVNLEAMACGTPVVASATGGIPEVV 319
Query: 212 VNGTTGLLHPVGKEGITP----LAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAER 267
V+G TG L P LAK I L E MG G +R +E F +A++
Sbjct: 320 VDGETGFLVPPDNSDADGFQAELAKAINILLADPELAKKMGIAGRKRAEEEFSWGSIAKK 379
Query: 268 IAVVLKEVL 276
+ ++VL
Sbjct: 380 TVEMYRKVL 388
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 3e-10
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Query: 164 VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVG 223
V + A+D+ V S A E +EAMA LPV+ TA GG E+V +G TG L P G
Sbjct: 266 VPALMQALDLFVLPSLA--EGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPG 323
Query: 224 KEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVL 276
LA+ + + R G G R ++ F + M A + ++L
Sbjct: 324 DA--VALARALQPYVSDPAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQLL 374
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 58.0 bits (140), Expect = 6e-10
Identities = 49/175 (28%), Positives = 70/175 (40%), Gaps = 19/175 (10%)
Query: 48 VVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFY 107
L ++ V N + +L + D +F + ++ KG D + +F
Sbjct: 70 AARLLGIPLVLTVHGVNRSLLEGVPLSLLALSIGLADKVF--VGRLAPEKGLDDLIEAF- 126
Query: 108 ESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFV---NKTLTV 164
K P + VI G + E + DRV F+ + +
Sbjct: 127 ------ALLKERGPDLKLVIAGDGPEREYLEELLAALL-----LLDRVIFLGGLDPEELL 175
Query: 165 APYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLL 219
A LAA DV V S E FG + +EAMA LPV+ T GG EIV +G TGLL
Sbjct: 176 ALLLAAADVFVLPS--LREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLL 228
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 2e-08
Identities = 47/180 (26%), Positives = 72/180 (40%), Gaps = 25/180 (13%)
Query: 97 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH 156
K F+ + + ++P +IG E E R V ++D V
Sbjct: 306 KDIKTFIRAAAIVRK-------KIPDAEGWVIGPTDEDPEYAE-ECRELVESLGLEDNVK 357
Query: 157 F---VNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN 213
F N V YL +DVLV S + E + +EAMA +PV+ T G E++
Sbjct: 358 FTGFQN----VKEYLPKLDVLVLTSIS--EGQPLVILEAMAAGIPVVATDVGSCRELIEG 411
Query: 214 GTTGLLHPVGKEGITP------LAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAER 267
L P G + P LA+ I++L E R MG+ G +RV+ + M +
Sbjct: 412 ADDEALGPAG--EVVPPADPEALARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDS 469
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475 |
| >gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 3e-08
Identities = 59/255 (23%), Positives = 103/255 (40%), Gaps = 45/255 (17%)
Query: 26 VTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNED- 84
V +++ K ER +P+ + + N L + + ++R+ L + ++
Sbjct: 145 VPSQFLKKFYEER----LPNADISIVPNGFCLETYQSNP------QPNLRQQLNISPDET 194
Query: 85 -LLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELR 143
LL+A +S KG L + +F + KL V++G + ++ +
Sbjct: 195 VLLYA--GRISPDKGILLLMQAFEKLATAHSNLKL-------VVVGDPTASSKGEKAAYQ 245
Query: 144 NYVMQ--KKIQDRVHFVNKTLTVAP-----YLAAIDVLVQNSQAWGECFGRITIEAMAFQ 196
V++ K+I DR + P Y D++V SQ E F + +EAMA
Sbjct: 246 KKVLEAAKRIGDRCIMLG---GQPPEKMHNYYPLADLVVVPSQ-VEEAFCMVAVEAMAAG 301
Query: 197 LPVLGTAAGGTTEIVVNGTTG--LLHPVGKEGITPLAKNIVKLATHVE--------RRLT 246
PVL + GG TE V+ G TG L P+ + I +I + E +
Sbjct: 302 KPVLASTKGGITEFVLEGITGYHLAEPMTSDSI---ISDINRTLADPELTQIAEQAKDFV 358
Query: 247 MGKRGYERVKEIFQE 261
K +E V + F+E
Sbjct: 359 FSKYSWEGVTQRFEE 373
|
Length = 380 |
| >gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 49/218 (22%), Positives = 89/218 (40%), Gaps = 32/218 (14%)
Query: 62 EDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVP 121
E V R+ +R+ LG ++ + + + KG D + +F ++K+ P
Sbjct: 205 EAIYLSEVERKKLRKKLGFSEDEKIILFVGRLDEIKGVDYLIEAF---KIVLKKD----P 257
Query: 122 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHF---VNKTLTVAPYLAAIDVLVQNS 178
+ VI+G D + + KKI ++ F ++K Y A DV V S
Sbjct: 258 NCRLVIVG-DGDYSRYLQ-------ECKKIWSKITFTGKLDKEKLYELYQIA-DVGVLPS 308
Query: 179 QAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEG------ITPLAK 232
E + IE M LP++GT + G +E++ +G G P+ + L +
Sbjct: 309 FH--EQCSYVAIEMMMHGLPLIGTTSTGLSEMIEDGLNGYKIPIKEYRDYVELDKKELVQ 366
Query: 233 NIVKLATHVERRLTMGKRGYERVKE-----IFQEHHMA 265
++KL + + MGK R E + +E+ +
Sbjct: 367 KLLKLLSSSDEAKQMGKNARRRYLEKYSLEVMRENMKS 404
|
Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406 |
| >gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase | Back alignment and domain information |
|---|
Score = 50.5 bits (121), Expect = 3e-07
Identities = 50/188 (26%), Positives = 74/188 (39%), Gaps = 17/188 (9%)
Query: 71 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS 130
R R LG+ + + A + + K D+ L + E L+ ++ L V ++G
Sbjct: 206 RATERARLGLPLDTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVI-----VVGG 260
Query: 131 DMNAQTKFESELRNYVMQKKIQDRVHF---VNKTLTVAPYLAAIDVLVQNSQAWGECFGR 187
+ L + I DRV F V Y AA DV+ S + E FG
Sbjct: 261 PSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAA-DVVAVPS--YNESFGL 317
Query: 188 ITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITP--LAKNIVKLATHVERRL 245
+ +EA A PV+ GG V +G TGLL +G P A + +L R+
Sbjct: 318 VAMEAQACGTPVVAARVGGLPVAVADGETGLL----VDGHDPADWADALARLLDDPRTRI 373
Query: 246 TMGKRGYE 253
MG E
Sbjct: 374 RMGAAAVE 381
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405 |
| >gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Score = 48.7 bits (117), Expect = 1e-06
Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 18/158 (11%)
Query: 110 LELIKEKKLEVPSVHAVIIGS----DMNAQTKFESELRNYVMQKKIQDRVHFVN----KT 161
++ ++ K VP V++GS D +E E+ Y + +H +
Sbjct: 209 IDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYE-EVLEY---AEGDPDIHVLTLPPVSD 264
Query: 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHP 221
L V A V++Q S E FG EA+ PV+ GG + +G TG L
Sbjct: 265 LEVNALQRASTVVLQKSI--REGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD 322
Query: 222 VGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIF 259
+E A I+ L E R MG E V+E F
Sbjct: 323 TVEE----AAVRILYLLRDPELRRKMGANAREHVRENF 356
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 20/175 (11%)
Query: 97 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH 156
KG DL + +F + E P H VI G D + + +EL+ ++DRV
Sbjct: 216 KGLDLLIEAF----AKLAE---RFPDWHLVIAGPD---EGGYRAELKQIAAALGLEDRVT 265
Query: 157 F---VNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN 213
F + A A D+ V S + E FG + EA+A PV+ T E++
Sbjct: 266 FTGMLYGEDKAAALADA-DLFVLPSHS--ENFGIVVAEALACGTPVVTTDKVPWQELIEY 322
Query: 214 GTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERI 268
G V + + LA + + +R MG+ G V+E F +A+++
Sbjct: 323 GCGW----VVDDDVDALAAALRRALELPQRLKAMGENGRALVEERFSWTAIAQQL 373
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 6e-06
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 169 AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN---GTTGLLHPVGKE 225
A+ DV V S++ E G + +EAMA +PV+ AGG +I+ G TG L+ G
Sbjct: 330 ASGDVFVMPSES--ETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGD- 386
Query: 226 GITPLAKNIVKLATHVERRLTMGKRGYERVKE 257
+ + + L E R MG E V++
Sbjct: 387 -VDDCVEKLETLLADPELRERMGAAAREEVEK 417
|
Length = 465 |
| >gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 8e-05
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 181 WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240
W E FG + IEAMA PV+ G E+V +G TG L ++ +LA
Sbjct: 253 WEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGF-----------LVDSVEELAAA 301
Query: 241 VERRLTMGKRGYERVKEIFQEHHMAERIA 269
V R + + + + A R+
Sbjct: 302 VARADRLDRA---ACRRRAERRFSAARMV 327
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335 |
| >gnl|CDD|99997 cd04946, GT1_AmsK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 191 EAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITP--LAKNIVKLATHVERRLTMG 248
EAM+F +PV+ T GGT EIV NG GLL + TP L ++ K + E TM
Sbjct: 329 EAMSFGIPVIATNVGGTPEIVDNGGNGLLLS---KDPTPNELVSSLSKFIDNEEEYQTMR 385
Query: 249 KRGYERVKEIF 259
++ E+ +E F
Sbjct: 386 EKAREKWEENF 396
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. Length = 407 |
| >gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 4e-04
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 183 ECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGL 218
E FG +EAM LP T GG EI+ +G +G
Sbjct: 654 EAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGF 689
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784 |
| >gnl|CDD|185387 PRK15490, PRK15490, Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Score = 40.5 bits (94), Expect = 7e-04
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 121 PSVHAVIIGS-DMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQ 179
P+ V++G D+ A+ + +E Q I +R+ FV + V +L ++V + S+
Sbjct: 428 PATRFVLVGDGDLRAEAQKRAE------QLGILERILFVGASRDVGYWLQKMNVFILFSR 481
Query: 180 AWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLL 219
G + IEA +PV+ T AGG+ E + G +G +
Sbjct: 482 YEG--LPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFI 519
|
Length = 578 |
| >gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 7e-04
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 183 ECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLL 219
E FG + +EAMA PV+ GG E V++G TG+L
Sbjct: 271 EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGIL 307
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351 |
| >gnl|CDD|222197 pfam13524, Glyco_trans_1_2, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 37.2 bits (87), Expect = 0.001
Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 7/81 (8%)
Query: 189 TIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMG 248
EA A P+L G E+ G +L+ +E LA+ + L E R +
Sbjct: 15 VFEAAACGAPLLTDRTPGLEELFEPGEEIVLYRDPEE----LAEKLRYLLADPEERRAIA 70
Query: 249 KRGYERVKEIFQEHHMAERIA 269
G ERV EH R
Sbjct: 71 AAGRERVL---AEHTYEHRAE 88
|
Length = 92 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 37.7 bits (88), Expect = 0.002
Identities = 37/156 (23%), Positives = 56/156 (35%), Gaps = 24/156 (15%)
Query: 85 LLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRN 144
+ G L E+L L+++ +P V IIGS EL
Sbjct: 3 VFIGGFGHAPNWDGLLWLLE---EALPLLRKA---LPDVELHIIGSGPE-------ELAR 49
Query: 145 YVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA 204
VHF+ +A LA+ DV + +G +EA+A LPV+ T
Sbjct: 50 LA------PNVHFLGFVEDLAALLASADVAL-APLRFGAGSPLKLLEALAAGLPVVATDI 102
Query: 205 GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240
G + + G+L E A+ IV+L
Sbjct: 103 -GAEGLPEDLGWGVLVADDPEEF---AEAIVRLLAD 134
|
Length = 134 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.002
Identities = 54/249 (21%), Positives = 82/249 (32%), Gaps = 47/249 (18%)
Query: 32 KNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91
K L + V+ LG V E +R + L+ +
Sbjct: 152 KRDLLRYLGVPPDKIVVIPLG-------VDPRFRPPPAEAEVLRALYLLPRPYFLY--VG 202
Query: 92 SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKI 151
++ K + L +F + KL VI+G + + LR + +
Sbjct: 203 TIEPRKNLERLLEAFARLPAKGPDPKL-------VIVGKRGWLNEELLARLR----ELGL 251
Query: 152 QDRVHFVNKTLTVA-PYLAAIDVLVQNSQA-----WGECFGRITIEAMAFQLPVLGTAAG 205
DRV F+ V+ LAA L + ++A E FG +EAMA PV+ +
Sbjct: 252 GDRVRFLGY---VSDEELAA---LYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNIS 305
Query: 206 GTTEIVVNGTTGLLHPVGKEGITP-----LAKNIVKLATHVERRLTMGKRGYERVKEIFQ 260
E+ G L P LA I +L R + +RG R K F
Sbjct: 306 SLPEVA--GDAALY-------FDPLDPEALAAAIERLLEDPALREELRERGLARAKR-FS 355
Query: 261 EHHMAERIA 269
A R
Sbjct: 356 WEKTARRTL 364
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|234452 TIGR04063, stp3, PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.002
Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 17/123 (13%)
Query: 139 ESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRIT------- 189
E LR + DRV F + V Y + IDVL R+T
Sbjct: 256 EEALRAQAAALGLADRVVFTGRVPHDEVERYYSLIDVLAYPRLPM-----RLTELVTPLK 310
Query: 190 -IEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMG 248
+EAMA V + GG E++ +G TG+L P G LA ++ L + + +
Sbjct: 311 PLEAMAQGRLVAASDVGGHRELIRDGETGVLFPAGDP--AALAAALLALLDNRAQWPELR 368
Query: 249 KRG 251
Sbjct: 369 AAA 371
|
PEP-CTERM/exosortase is a protein-sorting system associated with exopolysaccharide production. Members of this protein family are group 1 glycosyltransferases (see pfam00534) in which the overwhelming majority occur in species with the EpsH1 form of exosortase (see TIGR03109), and usually co-clustered with the exosortase. A typical member is Daro_2409 from Dechloromonas aromatica RCB. Length = 397 |
| >gnl|CDD|215073 PLN00142, PLN00142, sucrose synthase | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.003
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 183 ECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTG 217
E FG +EAM LP T GG EI+V+G +G
Sbjct: 677 EAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSG 711
|
Length = 815 |
| >gnl|CDD|185101 PRK15179, PRK15179, Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Score = 38.5 bits (89), Expect = 0.003
Identities = 29/144 (20%), Positives = 56/144 (38%), Gaps = 7/144 (4%)
Query: 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA 180
P V +++G +R + + + +R+ F + V +L + + S+
Sbjct: 547 PKVRFIMVGGG-----PLLESVREFAQRLGMGERILFTGLSRRVGYWLTQFNAFLLLSRF 601
Query: 181 WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240
G + IEA +PV+ T AGG E V G TGL P +A+ + ++
Sbjct: 602 EG--LPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDM 659
Query: 241 VERRLTMGKRGYERVKEIFQEHHM 264
+ ++ + F + M
Sbjct: 660 CAADPGIARKAADWASARFSLNQM 683
|
Length = 694 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 284 | |||
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 100.0 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 99.98 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 99.97 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 99.97 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 99.97 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 99.97 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 99.97 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 99.97 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 99.97 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.97 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 99.97 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.97 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 99.97 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.97 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.97 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 99.97 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.97 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 99.97 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 99.96 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 99.96 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.96 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.96 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 99.96 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.96 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.96 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 99.96 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.95 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.95 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.94 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.94 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.94 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.94 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.93 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.91 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.9 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.9 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.9 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.89 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.88 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.87 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.87 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.86 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.86 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.84 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.82 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.81 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 99.8 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.77 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.76 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.76 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.75 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.75 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.73 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 99.65 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.64 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.62 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.61 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.61 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.6 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.58 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.54 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 99.48 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.43 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 99.41 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.27 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 99.27 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 99.19 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.15 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.11 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 98.9 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.82 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 98.8 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.76 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 98.7 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 98.63 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 98.61 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 98.57 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.55 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 98.54 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.54 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 98.49 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 98.46 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 98.45 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.43 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.42 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 98.38 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 98.37 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 98.31 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 98.31 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 98.3 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 98.27 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 98.01 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 97.97 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 97.93 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 97.92 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 97.89 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 97.78 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.75 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 97.7 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 97.51 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 97.47 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 97.38 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 97.37 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 97.31 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 97.3 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 97.24 | |
| PLN02208 | 442 | glycosyltransferase family protein | 97.08 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 97.05 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 97.04 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 97.02 | |
| PF05159 | 269 | Capsule_synth: Capsule polysaccharide biosynthesis | 96.99 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 96.92 | |
| PLN00414 | 446 | glycosyltransferase family protein | 96.86 | |
| PLN02764 | 453 | glycosyltransferase family protein | 96.76 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 96.75 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 96.71 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 96.66 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 96.55 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 96.36 | |
| TIGR02195 | 334 | heptsyl_trn_II lipopolysaccharide heptosyltransfer | 96.36 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 96.35 | |
| cd03789 | 279 | GT1_LPS_heptosyltransferase Lipopolysaccharide hep | 96.35 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 96.33 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 96.25 | |
| KOG3349 | 170 | consensus Predicted glycosyltransferase [General f | 96.21 | |
| PRK10964 | 322 | ADP-heptose:LPS heptosyl transferase I; Provisiona | 96.06 | |
| PRK10422 | 352 | lipopolysaccharide core biosynthesis protein; Prov | 95.99 | |
| TIGR02193 | 319 | heptsyl_trn_I lipopolysaccharide heptosyltransfera | 95.91 | |
| PRK10916 | 348 | ADP-heptose:LPS heptosyltransferase II; Provisiona | 95.81 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 95.62 | |
| TIGR02201 | 344 | heptsyl_trn_III lipopolysaccharide heptosyltransfe | 95.56 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 95.54 | |
| PF01075 | 247 | Glyco_transf_9: Glycosyltransferase family 9 (hept | 95.5 | |
| KOG1192 | 496 | consensus UDP-glucuronosyl and UDP-glucosyl transf | 95.19 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 95.14 | |
| PF15024 | 559 | Glyco_transf_18: Glycosyltransferase family 18 | 94.8 | |
| PF10087 | 97 | DUF2325: Uncharacterized protein conserved in bact | 94.28 | |
| COG0859 | 334 | RfaF ADP-heptose:LPS heptosyltransferase [Cell env | 94.23 | |
| PF03016 | 302 | Exostosin: Exostosin family; InterPro: IPR004263 H | 93.25 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 93.19 | |
| COG1927 | 277 | Mtd Coenzyme F420-dependent N(5),N(10)-methenyltet | 92.07 | |
| COG1887 | 388 | TagB Putative glycosyl/glycerophosphate transferas | 91.92 | |
| TIGR03609 | 298 | S_layer_CsaB polysaccharide pyruvyl transferase Cs | 91.52 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 91.5 | |
| smart00672 | 256 | CAP10 Putative lipopolysaccharide-modifying enzyme | 91.44 | |
| KOG1021 | 464 | consensus Acetylglucosaminyltransferase EXT1/exost | 91.23 | |
| PF05686 | 395 | Glyco_transf_90: Glycosyl transferase family 90; I | 90.46 | |
| PF04230 | 286 | PS_pyruv_trans: Polysaccharide pyruvyl transferase | 90.3 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 89.62 | |
| PRK05282 | 233 | (alpha)-aspartyl dipeptidase; Validated | 88.29 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 88.05 | |
| cd03146 | 212 | GAT1_Peptidase_E Type 1 glutamine amidotransferase | 87.46 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 87.37 | |
| PF10093 | 374 | DUF2331: Uncharacterized protein conserved in bact | 86.97 | |
| PRK00994 | 277 | F420-dependent methylenetetrahydromethanopterin de | 85.0 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 84.31 | |
| cd03129 | 210 | GAT1_Peptidase_E_like Type 1 glutamine amidotransf | 84.18 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 84.14 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 83.23 | |
| KOG0780 | 483 | consensus Signal recognition particle, subunit Srp | 81.73 | |
| PRK05583 | 104 | ribosomal protein L7Ae family protein; Provisional | 80.45 |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=272.93 Aligned_cols=231 Identities=19% Similarity=0.219 Sum_probs=202.6
Q ss_pred cccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEE
Q 023290 10 YVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 89 (284)
Q Consensus 10 ~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~ 89 (284)
+...++.+|.++++|+...+.+.+ +|.+.+++.++|||+|.+.+.+.... ...+.+.|++
T Consensus 168 ~~~~~~~ad~vv~~S~~~~~~l~~-----~g~~~~ki~vi~nGvd~~~f~~~~~~---------------~~~~~~~il~ 227 (406)
T PRK15427 168 YQQLFRRGDLMLPISDLWAGRLQK-----MGCPPEKIAVSRMGVDMTRFSPRPVK---------------APATPLEIIS 227 (406)
T ss_pred HHHHHHhCCEEEECCHHHHHHHHH-----cCCCHHHEEEcCCCCCHHHcCCCccc---------------cCCCCeEEEE
Confidence 445567899999999987776443 47778899999999998877543211 1235678999
Q ss_pred eccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHH
Q 023290 90 INSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPY 167 (284)
Q Consensus 90 ~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~ 167 (284)
+|++.+.||++.+++++..+.+ +.++++++++|+|+ ..+.+++.++++++.++|.|+|+. +++.++
T Consensus 228 vGrl~~~Kg~~~ll~a~~~l~~-------~~~~~~l~ivG~G~-----~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~ 295 (406)
T PRK15427 228 VARLTEKKGLHVAIEACRQLKE-------QGVAFRYRILGIGP-----WERRLRTLIEQYQLEDVVEMPGFKPSHEVKAM 295 (406)
T ss_pred EeCcchhcCHHHHHHHHHHHHh-------hCCCEEEEEEECch-----hHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHH
Confidence 9999999999999999998765 33789999999986 678899999999999999999986 689999
Q ss_pred HhhccEEEEcCCC----CcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhh-CHH
Q 023290 168 LAAIDVLVQNSQA----WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVE 242 (284)
Q Consensus 168 ~~~ad~~~~ps~~----~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~-~~~ 242 (284)
|+.||++++||.. ..||+|++++|||+||+|||+|+.++..|++.++.+|++++++| +++++++|.++++ |++
T Consensus 296 l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv~~~d--~~~la~ai~~l~~~d~~ 373 (406)
T PRK15427 296 LDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLVPEND--AQALAQRLAAFSQLDTD 373 (406)
T ss_pred HHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEeCCCC--HHHHHHHHHHHHhCCHH
Confidence 9999999999972 13999999999999999999999999999999999999999998 9999999999999 999
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 023290 243 RRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 274 (284)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (284)
.+++|++++++.+.++|+|+.+++++.++|++
T Consensus 374 ~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~ 405 (406)
T PRK15427 374 ELAPVVKRAREKVETDFNQQVINRELASLLQA 405 (406)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999875
|
|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=265.49 Aligned_cols=240 Identities=21% Similarity=0.302 Sum_probs=206.5
Q ss_pred CCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecccc
Q 023290 15 PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS 94 (284)
Q Consensus 15 ~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~ 94 (284)
+.++.++++|....+++.+ .++.+..++.+|+||+|.+.+.+.... +...++.....++.++++++|++.
T Consensus 135 ~~~~~~i~vs~~~~~~~~~----~~~~~~~~~~vi~ngvd~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~vGrl~ 204 (374)
T TIGR03088 135 PLIHHYVAVSRDLEDWLRG----PVKVPPAKIHQIYNGVDTERFHPSRGD------RSPILPPDFFADESVVVGTVGRLQ 204 (374)
T ss_pred hcCCeEEEeCHHHHHHHHH----hcCCChhhEEEeccCccccccCCCccc------hhhhhHhhcCCCCCeEEEEEecCC
Confidence 4678899999988887544 467778899999999998877543221 122233334456788999999999
Q ss_pred ccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhccEE
Q 023290 95 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVL 174 (284)
Q Consensus 95 ~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad~~ 174 (284)
+.||++.+++++..+.+..++ ..++++|+++|.|+ ..+.+++.++++++.+++.|.|..+++..+|+.||++
T Consensus 205 ~~Kg~~~li~a~~~l~~~~~~---~~~~~~l~i~G~g~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~ 276 (374)
T TIGR03088 205 AVKDQPTLVRAFALLVRQLPE---GAERLRLVIVGDGP-----ARGACEQMVRAAGLAHLVWLPGERDDVPALMQALDLF 276 (374)
T ss_pred cccCHHHHHHHHHHHHHhCcc---cccceEEEEecCCc-----hHHHHHHHHHHcCCcceEEEcCCcCCHHHHHHhcCEE
Confidence 999999999999988764321 11479999999876 5678899999999988999999889999999999999
Q ss_pred EEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 023290 175 VQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYER 254 (284)
Q Consensus 175 ~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 254 (284)
++||. .||||++++|||+||+|||+++.++..|++.++.+|++++++| +++++++|..++++++.+..+++++++.
T Consensus 277 v~pS~--~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d--~~~la~~i~~l~~~~~~~~~~~~~a~~~ 352 (374)
T TIGR03088 277 VLPSL--AEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGD--AVALARALQPYVSDPAARRAHGAAGRAR 352 (374)
T ss_pred Eeccc--cccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 99998 8999999999999999999999999999999999999999988 9999999999999999999999999999
Q ss_pred HHHhcCHHHHHHHHHHHHHHHH
Q 023290 255 VKEIFQEHHMAERIAVVLKEVL 276 (284)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~ 276 (284)
+.++|+|+.+++++.++|++++
T Consensus 353 ~~~~fs~~~~~~~~~~~y~~~~ 374 (374)
T TIGR03088 353 AEQQFSINAMVAAYAGLYDQLL 374 (374)
T ss_pred HHHhCCHHHHHHHHHHHHHHhC
Confidence 9999999999999999998763
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-37 Score=261.09 Aligned_cols=237 Identities=19% Similarity=0.301 Sum_probs=200.3
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecc
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 92 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~ 92 (284)
.+..++.+++.|....+++.+. .+..++.+||||+|...+.+.. ...++++++++++..+++++|+
T Consensus 136 ~~~~~~~ii~~S~~~~~~~~~~------~~~~~i~vIpngvd~~~~~~~~--------~~~~~~~~~~~~~~~~il~~Gr 201 (380)
T PRK15484 136 LLDKNAKIIVPSQFLKKFYEER------LPNADISIVPNGFCLETYQSNP--------QPNLRQQLNISPDETVLLYAGR 201 (380)
T ss_pred HhccCCEEEEcCHHHHHHHHhh------CCCCCEEEecCCCCHHHcCCcc--------hHHHHHHhCCCCCCeEEEEecc
Confidence 4457789999999888876553 4667899999999987665432 2456778888878889999999
Q ss_pred ccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCC----ChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHH
Q 023290 93 VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA----QTKFESELRNYVMQKKIQDRVHFVNKT--LTVAP 166 (284)
Q Consensus 93 ~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~----~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~ 166 (284)
+.+.||++.+++|+..+.+ ++++++|+++|+++.. ...+.+.+++.+++++ .++.|+|.. +++..
T Consensus 202 l~~~Kg~~~Li~A~~~l~~-------~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~--~~v~~~G~~~~~~l~~ 272 (380)
T PRK15484 202 ISPDKGILLLMQAFEKLAT-------AHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIG--DRCIMLGGQPPEKMHN 272 (380)
T ss_pred CccccCHHHHHHHHHHHHH-------hCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcC--CcEEEeCCCCHHHHHH
Confidence 9999999999999998865 3489999999987532 1234556767777665 579999986 68999
Q ss_pred HHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCcee-eecCCCCChHHHHHHHHHHhhCHHHHH
Q 023290 167 YLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGL-LHPVGKEGITPLAKNIVKLATHVERRL 245 (284)
Q Consensus 167 ~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~-~~~~~d~~~~~~~~~i~~l~~~~~~~~ 245 (284)
+|+.||++++||. +.|+||++++|||+||+|||+++.+++.|++.++.+|+ ++++.| +++++++|..+++|++. .
T Consensus 273 ~~~~aDv~v~pS~-~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d--~~~la~~I~~ll~d~~~-~ 348 (380)
T PRK15484 273 YYPLADLVVVPSQ-VEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMT--SDSIISDINRTLADPEL-T 348 (380)
T ss_pred HHHhCCEEEeCCC-CccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCC--HHHHHHHHHHHHcCHHH-H
Confidence 9999999999997 25999999999999999999999999999999999998 567777 99999999999999985 6
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 023290 246 TMGKRGYERVKEIFQEHHMAERIAVVLKEVL 276 (284)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (284)
++++++++.+.++|+|+.+++++.++|++..
T Consensus 349 ~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 349 QIAEQAKDFVFSKYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999998764
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-36 Score=259.68 Aligned_cols=241 Identities=22% Similarity=0.282 Sum_probs=208.5
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecc
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 92 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~ 92 (284)
.++.+|.++++|....+.+. +.++.+..++.+||||+|.+.+.+.. +...++++++++++++|+++|+
T Consensus 160 ~~~~~d~vi~~s~~~~~~~~----~~~~~~~~ki~vi~ngvd~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G~ 227 (405)
T TIGR03449 160 LVDNADRLIANTDEEARDLV----RHYDADPDRIDVVAPGADLERFRPGD--------RATERARLGLPLDTKVVAFVGR 227 (405)
T ss_pred HHHhcCeEEECCHHHHHHHH----HHcCCChhhEEEECCCcCHHHcCCCc--------HHHHHHhcCCCCCCcEEEEecC
Confidence 46788999999998777643 34677778999999999988775432 2456778888888899999999
Q ss_pred ccccccHHHHHHHHHHHHHHHHhhccCCCC--eEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHH
Q 023290 93 VSRGKGQDLFLHSFYESLELIKEKKLEVPS--VHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYL 168 (284)
Q Consensus 93 ~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~--~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~ 168 (284)
+.+.||++.+++++..+.+. .++ ++|+++|++..+.....+.++++++++++.++|.|+|.. +++..+|
T Consensus 228 l~~~K~~~~li~a~~~l~~~-------~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l 300 (405)
T TIGR03449 228 IQPLKAPDVLLRAVAELLDR-------DPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVY 300 (405)
T ss_pred CCcccCHHHHHHHHHHHHhh-------CCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHH
Confidence 99999999999999988653 244 999999964322113567889999999998999999986 7899999
Q ss_pred hhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHH
Q 023290 169 AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMG 248 (284)
Q Consensus 169 ~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~ 248 (284)
+.||++++||. .|+||++++|||++|+|||+++.++..+++.++.+|++++++| +++++++|.+++++++.+.+++
T Consensus 301 ~~ad~~v~ps~--~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d--~~~la~~i~~~l~~~~~~~~~~ 376 (405)
T TIGR03449 301 RAADVVAVPSY--NESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHD--PADWADALARLLDDPRTRIRMG 376 (405)
T ss_pred HhCCEEEECCC--CCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCC--HHHHHHHHHHHHhCHHHHHHHH
Confidence 99999999998 8999999999999999999999999999999999999999988 9999999999999999999999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 023290 249 KRGYERVKEIFQEHHMAERIAVVLKEVLK 277 (284)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (284)
+++++.+ ++|+|+.+++++.++|.+++.
T Consensus 377 ~~~~~~~-~~fsw~~~~~~~~~~y~~~~~ 404 (405)
T TIGR03449 377 AAAVEHA-AGFSWAATADGLLSSYRDALA 404 (405)
T ss_pred HHHHHHH-HhCCHHHHHHHHHHHHHHHhh
Confidence 9999877 569999999999999998874
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=257.42 Aligned_cols=229 Identities=19% Similarity=0.257 Sum_probs=192.0
Q ss_pred ccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHH--HhCCCCCCeEEEEeccccccc
Q 023290 20 AMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRE--SLGVRNEDLLFAIINSVSRGK 97 (284)
Q Consensus 20 ~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~--~~~~~~~~~~i~~~g~~~~~k 97 (284)
+++.|..+++. +.+.++.+++++++||||+|+..+.+..... ...+. ..+++++.++++++|++.+.|
T Consensus 342 ~v~~s~~v~~~----l~~~lgip~~KI~VIyNGVD~~rf~p~~~~~------~~~r~~~~~~l~~~~~vIg~VgRl~~~K 411 (578)
T PRK15490 342 FMSNNHCVTRH----YADWLKLEAKHFQVVYNGVLPPSTEPSSEVP------HKIWQQFTQKTQDADTTIGGVFRFVGDK 411 (578)
T ss_pred hhhccHHHHHH----HHHHhCCCHHHEEEEeCCcchhhcCccchhh------HHHHHHhhhccCCCCcEEEEEEEEehhc
Confidence 56666666665 4445788999999999999998766543211 11222 233455667889999999999
Q ss_pred cHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhccEEEEc
Q 023290 98 GQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQN 177 (284)
Q Consensus 98 ~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad~~~~p 177 (284)
|+..+++++.++.+ ..++++|+|+|+|+ ..+.++++++++++.++|.|+|+.+++..+|+.+|++++|
T Consensus 412 g~~~LI~A~a~llk-------~~pdirLvIVGdG~-----~~eeLk~la~elgL~d~V~FlG~~~Dv~~~LaaADVfVlP 479 (578)
T PRK15490 412 NPFAWIDFAARYLQ-------HHPATRFVLVGDGD-----LRAEAQKRAEQLGILERILFVGASRDVGYWLQKMNVFILF 479 (578)
T ss_pred CHHHHHHHHHHHHh-------HCCCeEEEEEeCch-----hHHHHHHHHHHcCCCCcEEECCChhhHHHHHHhCCEEEEc
Confidence 99999999988765 23899999999986 6788999999999999999999999999999999999999
Q ss_pred CCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHH---HHHhhCHHHHHHHHHHHHHH
Q 023290 178 SQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNI---VKLATHVERRLTMGKRGYER 254 (284)
Q Consensus 178 s~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i---~~l~~~~~~~~~~~~~~~~~ 254 (284)
|. +||||++++|||++|+|||+++.++..|++.++.+|++++++| ++++++++ ..+....+.+..+++++++.
T Consensus 480 S~--~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D--~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~ 555 (578)
T PRK15490 480 SR--YEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILDDAQ--TVNLDQACRYAEKLVNLWRSRTGICQQTQSF 555 (578)
T ss_pred cc--ccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEECCCC--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98 9999999999999999999999999999999999999999988 88887776 44555555666789999999
Q ss_pred HHHhcCHHHHHHHHHHHHHH
Q 023290 255 VKEIFQEHHMAERIAVVLKE 274 (284)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~ 274 (284)
+.++|||+.+++++.++|.+
T Consensus 556 V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 556 LQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHhhCCHHHHHHHHHHHHHh
Confidence 99999999999999999864
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=262.81 Aligned_cols=230 Identities=23% Similarity=0.267 Sum_probs=201.9
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEec
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g 91 (284)
..++.+|.+++.|....+.. ..+|.+.+++.+||||+|.+.+.+.... ...++.++|+++|
T Consensus 240 ~~~~~ad~Ii~~s~~~~~~~-----~~~g~~~~ki~vIpNgid~~~f~~~~~~--------------~~~~~~~~i~~vG 300 (475)
T cd03813 240 LAYQAADRITTLYEGNRERQ-----IEDGADPEKIRVIPNGIDPERFAPARRA--------------RPEKEPPVVGLIG 300 (475)
T ss_pred HHHHhCCEEEecCHHHHHHH-----HHcCCCHHHeEEeCCCcCHHHcCCcccc--------------ccCCCCcEEEEEe
Confidence 34578999999999877643 3367888899999999998876543210 1234678899999
Q ss_pred cccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhc
Q 023290 92 SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAI 171 (284)
Q Consensus 92 ~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~a 171 (284)
++.+.||++.+++|+..+.+. .++++++|+|.++ ..+.+.++++++++++++.++|.|+| ..++.++|+.+
T Consensus 301 rl~~~Kg~~~li~a~~~l~~~-------~p~~~l~IvG~g~-~~~~~~~e~~~li~~l~l~~~V~f~G-~~~v~~~l~~a 371 (475)
T cd03813 301 RVVPIKDIKTFIRAAAIVRKK-------IPDAEGWVIGPTD-EDPEYAEECRELVESLGLEDNVKFTG-FQNVKEYLPKL 371 (475)
T ss_pred ccccccCHHHHHHHHHHHHHh-------CCCeEEEEECCCC-cChHHHHHHHHHHHHhCCCCeEEEcC-CccHHHHHHhC
Confidence 999999999999999988763 3899999999874 33457889999999999999999999 67999999999
Q ss_pred cEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeec------CCceeeecCCCCChHHHHHHHHHHhhCHHHHH
Q 023290 172 DVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN------GTTGLLHPVGKEGITPLAKNIVKLATHVERRL 245 (284)
Q Consensus 172 d~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~------~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~ 245 (284)
|++++||. .||+|++++|||+||+|||+|+.++..+++.+ |.+|++++++| +++++++|.++++|++.++
T Consensus 372 Dv~vlpS~--~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv~~~d--~~~la~ai~~ll~~~~~~~ 447 (475)
T cd03813 372 DVLVLTSI--SEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPAD--PEALARAILRLLKDPELRR 447 (475)
T ss_pred CEEEeCch--hhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEECCCC--HHHHHHHHHHHhcCHHHHH
Confidence 99999999 89999999999999999999999999999988 56899999998 9999999999999999999
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 023290 246 TMGKRGYERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (284)
++++++++.+.+.|+|+.+++++.++|+
T Consensus 448 ~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 448 AMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999999999999999999884
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=255.96 Aligned_cols=248 Identities=19% Similarity=0.220 Sum_probs=202.8
Q ss_pred cccCCcccccccchhhHHHHHHH-----HHHHhcccCCCeEEEecCCccccchhhhhhh-----------HHHHHHHHHH
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNR-----TRERLRIKMPDTYVVHLGNSKELMEVAEDNV-----------AKRVLREHVR 75 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~-----~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~-----------~~~~~~~~~r 75 (284)
..+..+|.++++|...++.+... +...++....++.+|+||+|.+.|.+..+.. .+...+..++
T Consensus 205 ~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~ 284 (485)
T PRK14099 205 AGLQLADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQ 284 (485)
T ss_pred HHHHhcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHH
Confidence 34678999999999998876531 1112234567999999999999887654321 1223356788
Q ss_pred HHhCCCC--CCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCC
Q 023290 76 ESLGVRN--EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQD 153 (284)
Q Consensus 76 ~~~~~~~--~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~ 153 (284)
+++|++. +.++++++||+.++||++.+++|+..+.+ .+++|+++|.|.. ++.+.+++++++++ +
T Consensus 285 ~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~---------~~~~lvivG~G~~---~~~~~l~~l~~~~~--~ 350 (485)
T PRK14099 285 ARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLG---------EGAQLALLGSGDA---ELEARFRAAAQAYP--G 350 (485)
T ss_pred HHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHh---------cCcEEEEEecCCH---HHHHHHHHHHHHCC--C
Confidence 9999974 46788999999999999999999988764 6789999998752 25677888887764 3
Q ss_pred cE-EEeccccCHHHHH-hhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecC---------CceeeecC
Q 023290 154 RV-HFVNKTLTVAPYL-AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG---------TTGLLHPV 222 (284)
Q Consensus 154 ~v-~~~~~~~~~~~~~-~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~---------~~g~~~~~ 222 (284)
++ .++|+.+++..+| +.||++++||. +|+||++++|||+||+|+|+++.||..+.+.++ .+|+++++
T Consensus 351 ~v~~~~G~~~~l~~~~~a~aDifv~PS~--~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~ 428 (485)
T PRK14099 351 QIGVVIGYDEALAHLIQAGADALLVPSR--FEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSP 428 (485)
T ss_pred CEEEEeCCCHHHHHHHHhcCCEEEECCc--cCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCC
Confidence 55 7889888888887 47999999999 999999999999999988989999999998775 68999999
Q ss_pred CCCChHHHHHHHHH---HhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhc
Q 023290 223 GKEGITPLAKNIVK---LATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSK 280 (284)
Q Consensus 223 ~d~~~~~~~~~i~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (284)
.| +++++++|.+ +++|++.++++++++++ ++|||+.+++++.++|++++++.+
T Consensus 429 ~d--~~~La~ai~~a~~l~~d~~~~~~l~~~~~~---~~fSw~~~a~~y~~lY~~l~~~~~ 484 (485)
T PRK14099 429 VT--ADALAAALRKTAALFADPVAWRRLQRNGMT---TDVSWRNPAQHYAALYRSLVAERR 484 (485)
T ss_pred CC--HHHHHHHHHHHHHHhcCHHHHHHHHHHhhh---hcCChHHHHHHHHHHHHHHHhhhC
Confidence 98 9999999997 67799999999998863 679999999999999999987654
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=264.26 Aligned_cols=230 Identities=17% Similarity=0.208 Sum_probs=191.9
Q ss_pred cccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHH--hCCCCCCeEEEEecccccc
Q 023290 19 GAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRES--LGVRNEDLLFAIINSVSRG 96 (284)
Q Consensus 19 ~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~--~~~~~~~~~i~~~g~~~~~ 96 (284)
.++++|....+. +.+.++++.+++.|||||+|...+.+.+.. ...+.. ...+++.++|+++||+.+.
T Consensus 461 i~Vs~S~~~~~~----l~~~~g~~~~kI~VI~NGVd~~~f~~~~~~-------~~~~~~~~~~~~~~~~vIg~VGRL~~~ 529 (694)
T PRK15179 461 ALSSNSQFAAHR----YADWLGVDERRIPVVYNGLAPLKSVQDDAC-------TAMMAQFDARTSDARFTVGTVMRVDDN 529 (694)
T ss_pred EEEeCcHHHHHH----HHHHcCCChhHEEEECCCcCHHhcCCCchh-------hHHHHhhccccCCCCeEEEEEEeCCcc
Confidence 344445544444 444578888899999999998766532211 111111 2234557889999999999
Q ss_pred ccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhccEEEE
Q 023290 97 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQ 176 (284)
Q Consensus 97 k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad~~~~ 176 (284)
||++.+++|+..+.+ +.++++|+|+|+|+ ..+.++++++++++.++|.|+|+.+++..+|+.||++++
T Consensus 530 KG~~~LI~A~a~l~~-------~~p~~~LvIvG~G~-----~~~~L~~l~~~lgL~~~V~flG~~~dv~~ll~aaDv~Vl 597 (694)
T PRK15179 530 KRPFLWVEAAQRFAA-------SHPKVRFIMVGGGP-----LLESVREFAQRLGMGERILFTGLSRRVGYWLTQFNAFLL 597 (694)
T ss_pred CCHHHHHHHHHHHHH-------HCcCeEEEEEccCc-----chHHHHHHHHHcCCCCcEEEcCCcchHHHHHHhcCEEEe
Confidence 999999999998866 33899999999986 678899999999999999999999999999999999999
Q ss_pred cCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q 023290 177 NSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVK 256 (284)
Q Consensus 177 ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~ 256 (284)
||. +|+||++++|||+||+|||+|+.++..|++.++.+|++++++|.++++++++|.+++.+......+++++++.+.
T Consensus 598 pS~--~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~ 675 (694)
T PRK15179 598 LSR--FEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTAPDVAEALARIHDMCAADPGIARKAADWAS 675 (694)
T ss_pred ccc--cccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCChHHHHHHHHHHHhChhccHHHHHHHHHHHH
Confidence 998 999999999999999999999999999999999999999988744578999999988876666678889999998
Q ss_pred HhcCHHHHHHHHHHHHH
Q 023290 257 EIFQEHHMAERIAVVLK 273 (284)
Q Consensus 257 ~~~~~~~~~~~~~~~~~ 273 (284)
++|||+.+++++.++|+
T Consensus 676 ~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 676 ARFSLNQMIASTVRCYQ 692 (694)
T ss_pred HhCCHHHHHHHHHHHhC
Confidence 89999999999999984
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=249.25 Aligned_cols=235 Identities=20% Similarity=0.262 Sum_probs=205.3
Q ss_pred ccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEe
Q 023290 11 VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII 90 (284)
Q Consensus 11 ~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~ 90 (284)
...++.+|.+++.|....+.+.+. + ....++.++|||++...+..... ...+++++++++.++++++
T Consensus 137 ~~~~~~~d~ii~~s~~~~~~~~~~----~-~~~~~i~vi~n~~~~~~~~~~~~--------~~~~~~~~~~~~~~~il~~ 203 (371)
T cd04962 137 RFSIEKSDGVTAVSESLRQETYEL----F-DITKEIEVIPNFVDEDRFRPKPD--------EALKRRLGAPEGEKVLIHI 203 (371)
T ss_pred HHHHhhCCEEEEcCHHHHHHHHHh----c-CCcCCEEEecCCcCHhhcCCCch--------HHHHHhcCCCCCCeEEEEe
Confidence 345578999999999887775442 3 34568999999999876544321 3456778888888999999
Q ss_pred ccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhh
Q 023290 91 NSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA 170 (284)
Q Consensus 91 g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 170 (284)
|++.+.||++.+++++..+.+. .+++++++|.++ ..+.+++.++++++.++|.|+|..+++..+|+.
T Consensus 204 g~l~~~K~~~~li~a~~~l~~~--------~~~~l~i~G~g~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 270 (371)
T cd04962 204 SNFRPVKRIDDVIRIFAKVRKE--------VPARLLLVGDGP-----ERSPAERLARELGLQDDVLFLGKQDHVEELLSI 270 (371)
T ss_pred cccccccCHHHHHHHHHHHHhc--------CCceEEEEcCCc-----CHHHHHHHHHHcCCCceEEEecCcccHHHHHHh
Confidence 9999999999999999887541 568999999885 457788888999988899999999999999999
Q ss_pred ccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHH
Q 023290 171 IDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKR 250 (284)
Q Consensus 171 ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~ 250 (284)
||++++||. .|++|++++|||++|+|||+++.++..+++.++.+|++++++| +++++++|..++++++.+.+|+++
T Consensus 271 ~d~~v~ps~--~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~~ 346 (371)
T cd04962 271 ADLFLLPSE--KESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGD--VEAMAEYALSLLEDDELWQEFSRA 346 (371)
T ss_pred cCEEEeCCC--cCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCC--HHHHHHHHHHHHhCHHHHHHHHHH
Confidence 999999998 9999999999999999999999999999999999999999988 999999999999999999999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHH
Q 023290 251 GYERVKEIFQEHHMAERIAVVLKEV 275 (284)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (284)
+++.+.++|+|+.+++++.++|+++
T Consensus 347 ~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 347 ARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 9999888999999999999999763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=255.45 Aligned_cols=247 Identities=15% Similarity=0.195 Sum_probs=191.1
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecc
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 92 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~ 92 (284)
.++.+|.++++|.... .+.+....+.+.+++.+||||+|.+.|.+......... ....+++++..++.++|+++||
T Consensus 181 ~~~~ad~ii~~s~~~~---~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~vGr 256 (439)
T TIGR02472 181 TLAHASLVITSTHQEI---EEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSE-IDNLLAPFLKDPEKPPILAISR 256 (439)
T ss_pred HHHhCCEEEECCHHHH---HHHHHhccCCCccceEEECCCcChhhcCCCCccccchh-HHHHHHhhccccCCcEEEEEcC
Confidence 3567888888875322 22122223577889999999999987765432111111 1122344555667788999999
Q ss_pred ccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCC------hHHHHHHHHHHHHcCCCCcEEEeccc--cCH
Q 023290 93 VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ------TKFESELRNYVMQKKIQDRVHFVNKT--LTV 164 (284)
Q Consensus 93 ~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~------~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~ 164 (284)
+.+.||++.+++|+..+.. +.. .+++. +++|+++... ..+.+.+..+++++++.++|.|+|+. +++
T Consensus 257 l~~~Kg~~~li~A~~~l~~-~~~----~~~l~-li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~ 330 (439)
T TIGR02472 257 PDRRKNIPSLVEAYGRSPK-LQE----MANLV-LVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDV 330 (439)
T ss_pred CcccCCHHHHHHHHHhChh-hhh----hccEE-EEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHH
Confidence 9999999999999986432 111 13332 3557654221 01234566778889999999999974 789
Q ss_pred HHHHhhc----cEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhC
Q 023290 165 APYLAAI----DVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240 (284)
Q Consensus 165 ~~~~~~a----d~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~ 240 (284)
..+|+.| |++++||. .|+||++++|||+||+|||+|+.++..|++.++.+|++++++| +++++++|.++++|
T Consensus 331 ~~~~~~a~~~~Dv~v~pS~--~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d--~~~la~~i~~ll~~ 406 (439)
T TIGR02472 331 PELYRLAARSRGIFVNPAL--TEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLD--LEAIASALEDALSD 406 (439)
T ss_pred HHHHHHHhhcCCEEecccc--cCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCC--HHHHHHHHHHHHhC
Confidence 9999977 99999999 8999999999999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 023290 241 VERRLTMGKRGYERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (284)
++.++++++++++.+.++|||+.+++++.++++
T Consensus 407 ~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 407 SSQWQLWSRNGIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999999999999999999998863
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=260.68 Aligned_cols=250 Identities=16% Similarity=0.168 Sum_probs=207.6
Q ss_pred ccCCcccccccchhhHHHHHHH----HHHHhcccCCCeEEEecCCccccchhhhhhh-----------HHHHHHHHHHHH
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNR----TRERLRIKMPDTYVVHLGNSKELMEVAEDNV-----------AKRVLREHVRES 77 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~----~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~-----------~~~~~~~~~r~~ 77 (284)
.+.++|.++++|...++.+... +...++....++.+|+||+|.+.|.+..+.. .+...+..++++
T Consensus 690 GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRke 769 (977)
T PLN02939 690 AIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQ 769 (977)
T ss_pred HHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHH
Confidence 3457899999999988876542 2233456778999999999999887654321 123335778999
Q ss_pred hCCCC---CCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCc
Q 023290 78 LGVRN---EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR 154 (284)
Q Consensus 78 ~~~~~---~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~ 154 (284)
+|+++ +.++|+++||+.+.||++.+++|+..+.. ++++|+|+|.|+.. .+...++.++.+++..++
T Consensus 770 lGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~---------~dvqLVIvGdGp~~--~~e~eL~~La~~l~l~dr 838 (977)
T PLN02939 770 LGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE---------LGGQFVLLGSSPVP--HIQREFEGIADQFQSNNN 838 (977)
T ss_pred hCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh---------cCCEEEEEeCCCcH--HHHHHHHHHHHHcCCCCe
Confidence 99974 46899999999999999999999988754 67899999988522 256788889999998889
Q ss_pred EEEeccccC--HHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeec---------CCceeeecCC
Q 023290 155 VHFVNKTLT--VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN---------GTTGLLHPVG 223 (284)
Q Consensus 155 v~~~~~~~~--~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~---------~~~g~~~~~~ 223 (284)
|.|++..++ ...+|+.||++++||+ +|+||++++|||+||+|+|++++||..++|.+ +.+|+++++.
T Consensus 839 V~FlG~~de~lah~IYAaADIFLmPSr--~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~ 916 (977)
T PLN02939 839 IRLILKYDEALSHSIYAASDMFIIPSM--FEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTP 916 (977)
T ss_pred EEEEeccCHHHHHHHHHhCCEEEECCC--ccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCC
Confidence 999998744 3579999999999999 99999999999999999999999999998865 5789999998
Q ss_pred CCChHHHHHHHHHHhh----CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhc
Q 023290 224 KEGITPLAKNIVKLAT----HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSK 280 (284)
Q Consensus 224 d~~~~~~~~~i~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (284)
| +++++++|.+++. +++.+++|+.+++ .+.|||+.+++++.++|++++....
T Consensus 917 D--~eaLa~AL~rAL~~~~~dpe~~~~L~~~am---~~dFSWe~~A~qYeeLY~~ll~~~~ 972 (977)
T PLN02939 917 D--EQGLNSALERAFNYYKRKPEVWKQLVQKDM---NIDFSWDSSASQYEELYQRAVARAR 972 (977)
T ss_pred C--HHHHHHHHHHHHHHhccCHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHhhh
Confidence 8 9999999998765 7899999987664 3679999999999999999987643
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=253.05 Aligned_cols=237 Identities=14% Similarity=0.152 Sum_probs=204.2
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEec
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g 91 (284)
..++.+|.+++.|....+.+++ ++.+..++.+||||+|.+.+.+..... ...++++++++++.++++|+|
T Consensus 167 ~~~~~ad~ii~~S~~~~~~~~~-----~~~~~~~i~vi~ngvd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~G 236 (412)
T PRK10307 167 SLLRRFDNVSTISRSMMNKARE-----KGVAAEKVIFFPNWSEVARFQPVADAD-----VDALRAQLGLPDGKKIVLYSG 236 (412)
T ss_pred HHHhhCCEEEecCHHHHHHHHH-----cCCCcccEEEECCCcCHhhcCCCCccc-----hHHHHHHcCCCCCCEEEEEcC
Confidence 3466799999999999887544 467778999999999988765432210 245788899988889999999
Q ss_pred cccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHh
Q 023290 92 SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLA 169 (284)
Q Consensus 92 ~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~ 169 (284)
++.+.||++.+++|+..+.+ .++++|+|+|+|+ ..+.++++++++++. +|.|+|+. +++..+|+
T Consensus 237 ~l~~~kg~~~li~a~~~l~~--------~~~~~l~ivG~g~-----~~~~l~~~~~~~~l~-~v~f~G~~~~~~~~~~~~ 302 (412)
T PRK10307 237 NIGEKQGLELVIDAARRLRD--------RPDLIFVICGQGG-----GKARLEKMAQCRGLP-NVHFLPLQPYDRLPALLK 302 (412)
T ss_pred ccccccCHHHHHHHHHHhcc--------CCCeEEEEECCCh-----hHHHHHHHHHHcCCC-ceEEeCCCCHHHHHHHHH
Confidence 99999999999999987632 2789999999986 568888999998886 79999985 68999999
Q ss_pred hccEEEEcCCCCcCc----cchhHHHHHhcCCCEEEcCCCC--cceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHH
Q 023290 170 AIDVLVQNSQAWGEC----FGRITIEAMAFQLPVLGTAAGG--TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVER 243 (284)
Q Consensus 170 ~ad~~~~ps~~~~e~----~~~~~~Eama~G~Pvi~~~~~~--~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~ 243 (284)
.||++++||. .|+ +|.+++|||+||+|||+++.++ ..+++. .+|++++++| +++++++|.++++|++.
T Consensus 303 ~aDi~v~ps~--~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d--~~~la~~i~~l~~~~~~ 376 (412)
T PRK10307 303 MADCHLLPQK--AGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPES--VEALVAAIAALARQALL 376 (412)
T ss_pred hcCEeEEeec--cCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCC--HHHHHHHHHHHHhCHHH
Confidence 9999999998 676 5778999999999999999876 457775 5899999998 99999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Q 023290 244 RLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKK 278 (284)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (284)
+.+|++++++.+.++|||+.+++++.++|++++.+
T Consensus 377 ~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 377 RPKLGTVAREYAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999998864
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=254.16 Aligned_cols=244 Identities=17% Similarity=0.198 Sum_probs=199.2
Q ss_pred ccCCcccccccchhhHHHHHHH-----HHHHhcccCCCeEEEecCCccccchhhhhhh-----------HHHHHHHHHHH
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNR-----TRERLRIKMPDTYVVHLGNSKELMEVAEDNV-----------AKRVLREHVRE 76 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~-----~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~-----------~~~~~~~~~r~ 76 (284)
.+..+|.++++|...++.+... +...++.+..++.+|+||+|.+.+.+..+.. .+...+..+++
T Consensus 194 ~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~ 273 (466)
T PRK00654 194 GLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQE 273 (466)
T ss_pred HHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHHHHHHHH
Confidence 3678999999999888775431 1122345677999999999999887643210 12233567899
Q ss_pred HhCCCC-CCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcE
Q 023290 77 SLGVRN-EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRV 155 (284)
Q Consensus 77 ~~~~~~-~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v 155 (284)
++|+++ +.++|+++||+.++||++.+++|+.++.+ .+++|+|+|++.. .+.+.+++++++++. ++
T Consensus 274 ~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~---------~~~~lvivG~g~~---~~~~~l~~l~~~~~~--~v 339 (466)
T PRK00654 274 RFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLE---------QGGQLVLLGTGDP---ELEEAFRALAARYPG--KV 339 (466)
T ss_pred HhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHh---------cCCEEEEEecCcH---HHHHHHHHHHHHCCC--cE
Confidence 999975 67899999999999999999999998865 5799999998742 256788888888763 55
Q ss_pred E-EeccccC-HHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecC------CceeeecCCCCCh
Q 023290 156 H-FVNKTLT-VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG------TTGLLHPVGKEGI 227 (284)
Q Consensus 156 ~-~~~~~~~-~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~------~~g~~~~~~d~~~ 227 (284)
. +.+..++ +..+|+.||++++||. +|+||++++|||+||+|+|+++.+|..+++.++ .+|++++++| +
T Consensus 340 ~~~~g~~~~~~~~~~~~aDv~v~PS~--~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d--~ 415 (466)
T PRK00654 340 GVQIGYDEALAHRIYAGADMFLMPSR--FEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFN--A 415 (466)
T ss_pred EEEEeCCHHHHHHHHhhCCEEEeCCC--CCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCC--H
Confidence 5 4566544 5689999999999999 999999999999999999999999999999888 8999999998 9
Q ss_pred HHHHHHHHHHhh---CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 023290 228 TPLAKNIVKLAT---HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK 277 (284)
Q Consensus 228 ~~~~~~i~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (284)
++++++|.++++ +++.+.+++.++++ +.|||+.+++++.++|+++++
T Consensus 416 ~~la~~i~~~l~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 416 EDLLRALRRALELYRQPPLWRALQRQAMA---QDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHHHHhh
Confidence 999999999876 77778888877753 689999999999999999875
|
|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=248.85 Aligned_cols=238 Identities=23% Similarity=0.280 Sum_probs=201.8
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHh-cccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEe
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERL-RIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII 90 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~-~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~ 90 (284)
..++.+|.++++|....+.+.+ .+ +....++.++|||+|.+.+.+.. +...+.+++++++.++++++
T Consensus 140 ~~~~~ad~vi~~S~~~~~~~~~----~~~~~~~~~i~vi~ng~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~ 207 (388)
T TIGR02149 140 TAIEAADRVIAVSGGMREDILK----YYPDLDPEKVHVIYNGIDTKEYKPDD--------GNVVLDRYGIDRSRPYILFV 207 (388)
T ss_pred HHHhhCCEEEEccHHHHHHHHH----HcCCCCcceEEEecCCCChhhcCCCc--------hHHHHHHhCCCCCceEEEEE
Confidence 3456789999999988887544 34 56677899999999988776432 35577888998888899999
Q ss_pred ccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCC-CCcEEEec-cc--cCHHH
Q 023290 91 NSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKI-QDRVHFVN-KT--LTVAP 166 (284)
Q Consensus 91 g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~-~~~v~~~~-~~--~~~~~ 166 (284)
|++.+.||++.+++++.++. ++++++++|+++. ..+..+.+++.++.++. .+++.+++ .. +++..
T Consensus 208 Grl~~~Kg~~~li~a~~~l~----------~~~~l~i~g~g~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 276 (388)
T TIGR02149 208 GRITRQKGVPHLLDAVHYIP----------KDVQVVLCAGAPD-TPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVE 276 (388)
T ss_pred cccccccCHHHHHHHHHHHh----------hcCcEEEEeCCCC-cHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHH
Confidence 99999999999999998763 5678888887643 23356677777777665 23577664 33 78999
Q ss_pred HHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCCh------HHHHHHHHHHhhC
Q 023290 167 YLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGI------TPLAKNIVKLATH 240 (284)
Q Consensus 167 ~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~------~~~~~~i~~l~~~ 240 (284)
+|+.||++++||. .|++|++++|||++|+|||+++.++..|++.++.+|++++++| + ++++++|.+++.|
T Consensus 277 ~~~~aDv~v~ps~--~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~--~~~~~~~~~l~~~i~~l~~~ 352 (388)
T TIGR02149 277 LLSNAEVFVCPSI--YEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDN--SDADGFQAELAKAINILLAD 352 (388)
T ss_pred HHHhCCEEEeCCc--cCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCC--CcccchHHHHHHHHHHHHhC
Confidence 9999999999998 8999999999999999999999999999999999999999987 7 8999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 023290 241 VERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVL 276 (284)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (284)
++.++++++++++.+.++|+|+.+++++.++|++++
T Consensus 353 ~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 353 PELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999998763
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=251.90 Aligned_cols=230 Identities=20% Similarity=0.236 Sum_probs=195.0
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhC-CCCCCeEEEEec
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLG-VRNEDLLFAIIN 91 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~i~~~g 91 (284)
..+.+|.++++|....+.+.+. ...+.+++.++|||+|.+.+.+.... ...+.++. ..++.++|+++|
T Consensus 202 ~~~~ad~ii~~S~~~~~~l~~~----~~~~~~kv~vi~nGvd~~~f~p~~~~-------~~~~~~~~~~~~~~~~i~~vG 270 (465)
T PLN02871 202 LHRAADLTLVTSPALGKELEAA----GVTAANRIRVWNKGVDSESFHPRFRS-------EEMRARLSGGEPEKPLIVYVG 270 (465)
T ss_pred HHhhCCEEEECCHHHHHHHHHc----CCCCcCeEEEeCCccCccccCCcccc-------HHHHHHhcCCCCCCeEEEEeC
Confidence 3467899999999888875542 22446789999999999877653321 33444443 234678899999
Q ss_pred cccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHh
Q 023290 92 SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLA 169 (284)
Q Consensus 92 ~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~ 169 (284)
++.+.||++.+++++..+ ++++|+|+|+|+ +.+.++++++. .+|.|+|++ +++..+|+
T Consensus 271 rl~~~K~~~~li~a~~~~-----------~~~~l~ivG~G~-----~~~~l~~~~~~----~~V~f~G~v~~~ev~~~~~ 330 (465)
T PLN02871 271 RLGAEKNLDFLKRVMERL-----------PGARLAFVGDGP-----YREELEKMFAG----TPTVFTGMLQGDELSQAYA 330 (465)
T ss_pred CCchhhhHHHHHHHHHhC-----------CCcEEEEEeCCh-----HHHHHHHHhcc----CCeEEeccCCHHHHHHHHH
Confidence 999999999999988764 789999999876 66777777664 379999997 78999999
Q ss_pred hccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeec---CCceeeecCCCCChHHHHHHHHHHhhCHHHHHH
Q 023290 170 AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN---GTTGLLHPVGKEGITPLAKNIVKLATHVERRLT 246 (284)
Q Consensus 170 ~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~---~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~ 246 (284)
.||++++||. .|++|++++|||+||+|||+++.++..|++.+ +.+|++++++| +++++++|.++++|++.+++
T Consensus 331 ~aDv~V~pS~--~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d--~~~la~~i~~ll~~~~~~~~ 406 (465)
T PLN02871 331 SGDVFVMPSE--SETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGD--VDDCVEKLETLLADPELRER 406 (465)
T ss_pred HCCEEEECCc--ccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCC--HHHHHHHHHHHHhCHHHHHH
Confidence 9999999998 89999999999999999999999999999998 99999999998 99999999999999999999
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHh
Q 023290 247 MGKRGYERVKEIFQEHHMAERIAV-VLKEVLKK 278 (284)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 278 (284)
|++++++.+. +|+|+.+++++.+ +|++++..
T Consensus 407 ~~~~a~~~~~-~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 407 MGAAAREEVE-KWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred HHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999885 7999999999998 79888764
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=248.61 Aligned_cols=228 Identities=18% Similarity=0.300 Sum_probs=190.7
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEec
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g 91 (284)
.....+|.+++.|....+.+.+.+.+ ++...+++.++|||++.....+.. ..+...|+++|
T Consensus 266 ~~~~~~D~iI~~S~~~~~~l~~~~~~-~~~~~~ki~viP~g~~~~~~~~~~------------------~r~~~~il~vG 326 (500)
T TIGR02918 266 SNADYIDFFITATDIQNQILKNQFKK-YYNIEPRIYTIPVGSLDELQYPEQ------------------ERKPFSIITAS 326 (500)
T ss_pred hchhhCCEEEECCHHHHHHHHHHhhh-hcCCCCcEEEEcCCCcccccCccc------------------ccCCeEEEEEe
Confidence 45667899999999888876664332 334467899999998654432110 12456789999
Q ss_pred cccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhc
Q 023290 92 SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAI 171 (284)
Q Consensus 92 ~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~a 171 (284)
|+.+.||++.+++|+..+.+ ..|+++|+|+|.|+ ..+.++++++++++.++|.|+|+. ++.++|+.|
T Consensus 327 rl~~~Kg~~~li~A~~~l~~-------~~p~~~l~i~G~G~-----~~~~l~~~i~~~~l~~~V~f~G~~-~~~~~~~~a 393 (500)
T TIGR02918 327 RLAKEKHIDWLVKAVVKAKK-------SVPELTFDIYGEGG-----EKQKLQKIINENQAQDYIHLKGHR-NLSEVYKDY 393 (500)
T ss_pred ccccccCHHHHHHHHHHHHh-------hCCCeEEEEEECch-----hHHHHHHHHHHcCCCCeEEEcCCC-CHHHHHHhC
Confidence 99999999999999999876 34899999999986 567899999999999999999976 899999999
Q ss_pred cEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC-CcceeeecCCceeeecCCC--CC----hHHHHHHHHHHhhCHHHH
Q 023290 172 DVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG-GTTEIVVNGTTGLLHPVGK--EG----ITPLAKNIVKLATHVERR 244 (284)
Q Consensus 172 d~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~-~~~e~v~~~~~g~~~~~~d--~~----~~~~~~~i~~l~~~~~~~ 244 (284)
|++++||. .||||++++||||||+|||+++.+ |.++++.++.+|+++++++ .+ +++++++|..+++ ++.+
T Consensus 394 dv~v~pS~--~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~-~~~~ 470 (500)
T TIGR02918 394 ELYLSAST--SEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN-SNDI 470 (500)
T ss_pred CEEEEcCc--cccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC-hHHH
Confidence 99999998 999999999999999999999986 8999999999999998532 12 7889999999994 5678
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 023290 245 LTMGKRGYERVKEIFQEHHMAERIAVVLKEV 275 (284)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (284)
.+|++++++.+ +.|+|+.+++++.++++++
T Consensus 471 ~~~~~~a~~~a-~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 471 DAFHEYSYQIA-EGFLTANIIEKWKKLVREV 500 (500)
T ss_pred HHHHHHHHHHH-HhcCHHHHHHHHHHHHhhC
Confidence 99999999976 5699999999999998753
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=247.65 Aligned_cols=234 Identities=18% Similarity=0.186 Sum_probs=188.1
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEec
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g 91 (284)
..+..+|.+|+.|....+.+.+. + ..++.|||||+|.+.+.+.+.. ....+...++.++.++++|+|
T Consensus 152 ~~~~~ad~vi~~s~~~~~~~~~~----~---~~ki~vI~ngvd~~~f~~~~~~------~~~~~~~~~~~~~~~~i~~vg 218 (396)
T cd03818 152 LALAQADAGVSPTRWQRSTFPAE----L---RSRISVIHDGIDTDRLRPDPQA------RLRLPNGRVLTPGDEVITFVA 218 (396)
T ss_pred HHHHhCCEEECCCHHHHhhCcHh----h---ccceEEeCCCccccccCCCchh------hhcccccccCCCCCeEEEEEC
Confidence 34678999999999888875442 2 3689999999999887654321 112223333456778899999
Q ss_pred c-ccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCCh----HHHHHHHHHHHHcC---CCCcEEEeccc--
Q 023290 92 S-VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQT----KFESELRNYVMQKK---IQDRVHFVNKT-- 161 (284)
Q Consensus 92 ~-~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~----~~~~~l~~~~~~~~---~~~~v~~~~~~-- 161 (284)
| +.+.||++.+++|+..+.+ ..++++|+|+|++.+... ......+.+.++++ ..++|.|+|++
T Consensus 219 R~l~~~Kg~~~ll~a~~~l~~-------~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~ 291 (396)
T cd03818 219 RNLEPYRGFHVFMRALPRLLR-------ARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPY 291 (396)
T ss_pred CCcccccCHHHHHHHHHHHHH-------HCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCH
Confidence 7 9999999999999998865 338999999997432100 00011222233332 24689999986
Q ss_pred cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCH
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHV 241 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~ 241 (284)
+++..+|+.||++++||. .|++|++++||||||+|||+++.++..|++.++.+|++++++| +++++++|.++++++
T Consensus 292 ~~~~~~l~~adv~v~~s~--~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv~~~d--~~~la~~i~~ll~~~ 367 (396)
T cd03818 292 DQYLALLQVSDVHVYLTY--PFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLVDFFD--PDALAAAVIELLDDP 367 (396)
T ss_pred HHHHHHHHhCcEEEEcCc--ccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEcCCCC--HHHHHHHHHHHHhCH
Confidence 689999999999999998 8999999999999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 023290 242 ERRLTMGKRGYERVKEIFQEHHMAERIA 269 (284)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (284)
+.+.+|++++++.+.++|+|+.+++++.
T Consensus 368 ~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 368 ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 9999999999999999999999998875
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-34 Score=258.88 Aligned_cols=247 Identities=17% Similarity=0.177 Sum_probs=202.7
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcc--cCCCeEEEecCCccccchhhhhh------------hHHHHHHHHHHHH
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRI--KMPDTYVVHLGNSKELMEVAEDN------------VAKRVLREHVRES 77 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~--~~~~i~vi~~g~~~~~~~~~~~~------------~~~~~~~~~~r~~ 77 (284)
..+..+|.++++|...++.+.. ...+ ...++++|+||+|.+.|.+..+. ..+...+..++++
T Consensus 757 ~~l~~AD~ViTVS~tya~EI~~----~~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~ 832 (1036)
T PLN02316 757 KAMAYADKATTVSPTYSREVSG----NSAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQR 832 (1036)
T ss_pred HHHHHCCEEEeCCHHHHHHHHh----ccCcccccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHH
Confidence 3456789999999998776543 2222 24789999999999877654321 0122335678999
Q ss_pred hCCCC-CCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCC--CCc
Q 023290 78 LGVRN-EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKI--QDR 154 (284)
Q Consensus 78 ~~~~~-~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~--~~~ 154 (284)
+|++. +.++|+++||+.+.||++.+++|+..+.+ .+++|+|+|+|+. ..+...++++++++++ +++
T Consensus 833 lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~---------~~~qlVIvG~Gpd--~~~e~~l~~La~~Lg~~~~~r 901 (1036)
T PLN02316 833 LGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLE---------RNGQVVLLGSAPD--PRIQNDFVNLANQLHSSHHDR 901 (1036)
T ss_pred hCCCcccCeEEEEEeccccccCHHHHHHHHHHHhh---------cCcEEEEEeCCCC--HHHHHHHHHHHHHhCccCCCe
Confidence 99984 67899999999999999999999998765 6799999998753 2356788899998865 578
Q ss_pred EEEeccccCH--HHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecC-------------Cceee
Q 023290 155 VHFVNKTLTV--APYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG-------------TTGLL 219 (284)
Q Consensus 155 v~~~~~~~~~--~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~-------------~~g~~ 219 (284)
|.|.+..++. ..+|+.||++++||+ +|+||++.+|||+||+|+|+++.||+.+.|.++ .+|++
T Consensus 902 V~f~g~~de~lah~iyaaADiflmPS~--~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGfl 979 (1036)
T PLN02316 902 ARLCLTYDEPLSHLIYAGADFILVPSI--FEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFS 979 (1036)
T ss_pred EEEEecCCHHHHHHHHHhCcEEEeCCc--ccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEE
Confidence 9988766443 369999999999999 999999999999999999999999999999874 68999
Q ss_pred ecCCCCChHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 023290 220 HPVGKEGITPLAKNIVKLATH-VERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK 277 (284)
Q Consensus 220 ~~~~d~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (284)
+++.| +++++.+|.+++++ ++.+..+++.+++.+.+.|||+.+++++.++|+.+++
T Consensus 980 f~~~d--~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~~ 1036 (1036)
T PLN02316 980 FDGAD--AAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSARK 1036 (1036)
T ss_pred eCCCC--HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhC
Confidence 99998 99999999999986 4556667888888888899999999999999998763
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-34 Score=259.86 Aligned_cols=255 Identities=15% Similarity=0.163 Sum_probs=201.5
Q ss_pred ccCCcccccccchhhHHHHHHHH-----------HH-------HhcccCCCeEEEecCCccccchhhhhhhHH-------
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRT-----------RE-------RLRIKMPDTYVVHLGNSKELMEVAEDNVAK------- 67 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~-----------~~-------~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~------- 67 (284)
.+..++.||+.|....+.....+ .. -+|...+++.|||||+|.+.|.+.......
T Consensus 378 ~l~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~ 457 (1050)
T TIGR02468 378 SLDASEIVITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEE 457 (1050)
T ss_pred HHHhcCEEEEeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhccccc
Confidence 46789999999988776432211 00 022335699999999999988764321110
Q ss_pred ------HHHHHHHHHHhCCCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCC------C
Q 023290 68 ------RVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA------Q 135 (284)
Q Consensus 68 ------~~~~~~~r~~~~~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~------~ 135 (284)
......++ .+...++.++|+++||+.+.||++.+++|+..+.... ..++++ +|+|.++.. .
T Consensus 458 ~~~~~~~~~~~~l~-r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~-----~~~nL~-LIiG~gdd~d~l~~~~ 530 (1050)
T TIGR02468 458 HPAKPDPPIWSEIM-RFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLR-----ELANLT-LIMGNRDDIDEMSSGS 530 (1050)
T ss_pred ccccccchhhHHHH-hhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhc-----cCCCEE-EEEecCchhhhhhccc
Confidence 00012233 3344667788999999999999999999999885421 114665 456764321 1
Q ss_pred hHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHhhc----cEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcce
Q 023290 136 TKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAI----DVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTE 209 (284)
Q Consensus 136 ~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~~a----d~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e 209 (284)
..+...+..+++++++.++|.|+|+. +++..+|+.| |++++||. +|+||++++||||||+|||+|+.++..+
T Consensus 531 ~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~--~EgFGLvlLEAMAcGlPVVASdvGG~~E 608 (1050)
T TIGR02468 531 SSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPMVATKNGGPVD 608 (1050)
T ss_pred hHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcc--cCCCCHHHHHHHHhCCCEEEeCCCCcHH
Confidence 12456788899999999999999974 7899999988 69999999 9999999999999999999999999999
Q ss_pred eeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhh
Q 023290 210 IVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKS 279 (284)
Q Consensus 210 ~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (284)
++.++.+|+++++.| +++++++|.++++|++.++++++++++.+. +|+|+.+++++.+.+..+...+
T Consensus 609 II~~g~nGlLVdP~D--~eaLA~AL~~LL~Dpelr~~m~~~gr~~v~-~FSWe~ia~~yl~~i~~~~~~~ 675 (1050)
T TIGR02468 609 IHRVLDNGLLVDPHD--QQAIADALLKLVADKQLWAECRQNGLKNIH-LFSWPEHCKTYLSRIASCRPRH 675 (1050)
T ss_pred HhccCCcEEEECCCC--HHHHHHHHHHHhhCHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHhccC
Confidence 999999999999998 999999999999999999999999999886 6999999999999999887655
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=247.51 Aligned_cols=244 Identities=18% Similarity=0.185 Sum_probs=198.6
Q ss_pred ccCCcccccccchhhHHHHHHH------HHHHhcccCCCeEEEecCCccccchhhhhhh-----------HHHHHHHHHH
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNR------TRERLRIKMPDTYVVHLGNSKELMEVAEDNV-----------AKRVLREHVR 75 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~------~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~-----------~~~~~~~~~r 75 (284)
.+..+|.++++|...++.+... +...+.....++.+|+||+|.+.+.+..+.. .+...+..++
T Consensus 217 ~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~ 296 (489)
T PRK14098 217 GVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALL 296 (489)
T ss_pred HHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHH
Confidence 4578999999999988875431 1111112367899999999999887654321 1233467788
Q ss_pred HHhCCCC--CCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCC
Q 023290 76 ESLGVRN--EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQD 153 (284)
Q Consensus 76 ~~~~~~~--~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~ 153 (284)
+++|++. +.++|+++||+.+.||++.+++|+..+.+ .+++|+|+|+|+. .+.+.+++++++++ +
T Consensus 297 ~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~---------~~~~lvivG~G~~---~~~~~l~~l~~~~~--~ 362 (489)
T PRK14098 297 EEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE---------LDIQLVICGSGDK---EYEKRFQDFAEEHP--E 362 (489)
T ss_pred HHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh---------cCcEEEEEeCCCH---HHHHHHHHHHHHCC--C
Confidence 8999863 56899999999999999999999998865 6899999998752 25678888888764 6
Q ss_pred cEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeec----CCceeeecCCCCCh
Q 023290 154 RVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN----GTTGLLHPVGKEGI 227 (284)
Q Consensus 154 ~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~----~~~g~~~~~~d~~~ 227 (284)
+|.+++.. +++..+|+.||++++||. .|+||++.+|||+||+|+|+++.||..+.+.+ +.+|+++++.| +
T Consensus 363 ~V~~~g~~~~~~~~~~~a~aDi~l~PS~--~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d--~ 438 (489)
T PRK14098 363 QVSVQTEFTDAFFHLAIAGLDMLLMPGK--IESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYT--P 438 (489)
T ss_pred CEEEEEecCHHHHHHHHHhCCEEEeCCC--CCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCCCC--H
Confidence 89999876 456899999999999999 99999999999999999999999999998864 67999999998 9
Q ss_pred HHHHHHHHHHh---hCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 023290 228 TPLAKNIVKLA---THVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK 277 (284)
Q Consensus 228 ~~~~~~i~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (284)
++++++|.+++ ++++.+.+++.++. .+.|||+.+++++.++|+++++
T Consensus 439 ~~la~ai~~~l~~~~~~~~~~~~~~~~~---~~~fsw~~~a~~y~~lY~~~~~ 488 (489)
T PRK14098 439 EALVAKLGEALALYHDEERWEELVLEAM---ERDFSWKNSAEEYAQLYRELLG 488 (489)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHh---cCCCChHHHHHHHHHHHHHHhc
Confidence 99999999865 58888888776653 4689999999999999999874
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-34 Score=244.52 Aligned_cols=230 Identities=20% Similarity=0.209 Sum_probs=195.3
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecc
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 92 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~ 92 (284)
.++.+|.++++|....+.+.. ..+.+.+++.+||||+|.+.+.+.... ..++.++++++|+
T Consensus 141 ~~~~~d~ii~~s~~~~~~~~~----~~~~~~~k~~vi~ngvd~~~f~~~~~~---------------~~~~~~~i~~~gr 201 (398)
T cd03796 141 SLADVDHVICVSHTSKENTVL----RASLDPERVSVIPNAVDSSDFTPDPSK---------------RDNDKITIVVISR 201 (398)
T ss_pred hhccCCEEEEecHhHhhHHHH----HhCCChhhEEEEcCccCHHHcCCCccc---------------CCCCceEEEEEec
Confidence 357899999999988775322 245677889999999998766543211 1346789999999
Q ss_pred ccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHhh
Q 023290 93 VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAA 170 (284)
Q Consensus 93 ~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~~ 170 (284)
+.+.||++.+++++..+.+ ..++++|+++|.++ ..+.++++++++++.++|.|+|.. +++..+|+.
T Consensus 202 l~~~Kg~~~li~a~~~l~~-------~~~~~~l~i~G~g~-----~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ 269 (398)
T cd03796 202 LVYRKGIDLLVGIIPEICK-------KHPNVRFIIGGDGP-----KRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQ 269 (398)
T ss_pred cchhcCHHHHHHHHHHHHh-------hCCCEEEEEEeCCc-----hHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHh
Confidence 9999999999999988765 33899999999875 567889999999999999999986 789999999
Q ss_pred ccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHH
Q 023290 171 IDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKR 250 (284)
Q Consensus 171 ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~ 250 (284)
||++++||. .|+||++++|||+||+|||+++.++..|++.++. ++++++ | +++++++|.+++++......+..+
T Consensus 270 ad~~v~pS~--~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~-~~~~~~-~--~~~l~~~l~~~l~~~~~~~~~~~~ 343 (398)
T cd03796 270 GHIFLNTSL--TEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPDM-ILLAEP-D--VESIVRKLEEAISILRTGKHDPWS 343 (398)
T ss_pred CCEEEeCCh--hhccCHHHHHHHHcCCCEEECCCCCchhheeCCc-eeecCC-C--HHHHHHHHHHHHhChhhhhhHHHH
Confidence 999999998 8999999999999999999999999999997753 444443 5 899999999999987766678888
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHhh
Q 023290 251 GYERVKEIFQEHHMAERIAVVLKEVLKKS 279 (284)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (284)
+++.+.++|||+.+++++.++|+++++..
T Consensus 344 ~~~~~~~~fs~~~~~~~~~~~y~~l~~~~ 372 (398)
T cd03796 344 FHNRVKKMYSWEDVAKRTEKVYDRILQTP 372 (398)
T ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999998653
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=248.62 Aligned_cols=242 Identities=20% Similarity=0.206 Sum_probs=197.7
Q ss_pred ccCCcccccccchhhHHHHHHH-----HHHHhcccCCCeEEEecCCccccchhhhhhh-----------HHHHHHHHHHH
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNR-----TRERLRIKMPDTYVVHLGNSKELMEVAEDNV-----------AKRVLREHVRE 76 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~-----~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~-----------~~~~~~~~~r~ 76 (284)
.+..+|.++++|...++.+... +...+.....++.+|+||+|.+.+.+..+.. .+...+..+++
T Consensus 202 ~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~ 281 (473)
T TIGR02095 202 GIVYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQE 281 (473)
T ss_pred HHHhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHH
Confidence 4678999999999887765431 1111123467899999999999887543211 12233577899
Q ss_pred HhCCCC--CCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCc
Q 023290 77 SLGVRN--EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR 154 (284)
Q Consensus 77 ~~~~~~--~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~ 154 (284)
++|++. +.++|+++||+.+.||++.+++|+.++.+ .+++|+|+|.+.+ .+.+.+++++.+++ .+
T Consensus 282 ~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~---------~~~~lvi~G~g~~---~~~~~l~~~~~~~~--~~ 347 (473)
T TIGR02095 282 ELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLE---------LGGQLVVLGTGDP---ELEEALRELAERYP--GN 347 (473)
T ss_pred HcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHH---------cCcEEEEECCCCH---HHHHHHHHHHHHCC--Cc
Confidence 999976 67899999999999999999999998865 5699999998752 35677888887654 46
Q ss_pred EEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecC------CceeeecCCCCC
Q 023290 155 VHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG------TTGLLHPVGKEG 226 (284)
Q Consensus 155 v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~------~~g~~~~~~d~~ 226 (284)
+.+.+.. +++..+|+.||++++||. +|+||++++|||+||+|+|+++.++..+++.++ .+|+++++.|
T Consensus 348 v~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d-- 423 (473)
T TIGR02095 348 VRVIIGYDEALAHLIYAGADFILMPSR--FEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYD-- 423 (473)
T ss_pred EEEEEcCCHHHHHHHHHhCCEEEeCCC--cCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCC--
Confidence 7776554 456789999999999999 999999999999999999999999999999988 8999999998
Q ss_pred hHHHHHHHHHHhh----CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 023290 227 ITPLAKNIVKLAT----HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEV 275 (284)
Q Consensus 227 ~~~~~~~i~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (284)
+++++++|.+++. +++.++++++++++ +.|||+.+++++.++|+++
T Consensus 424 ~~~la~~i~~~l~~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 424 PGALLAALSRALRLYRQDPSLWEALQKNAMS---QDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHhc---cCCCcHHHHHHHHHHHHhC
Confidence 9999999999888 89989999888753 6899999999999999863
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-34 Score=243.13 Aligned_cols=223 Identities=24% Similarity=0.304 Sum_probs=194.8
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEec
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g 91 (284)
..++.+|.++++|+...+.+.+ .+.+.+++.+++||+|.+.+.+... ..+..+++++|
T Consensus 138 ~~~~~~d~ii~~s~~~~~~~~~-----~~~~~~~i~vi~~g~d~~~~~~~~~-----------------~~~~~~i~~~G 195 (367)
T cd05844 138 RLARRAALFIAVSQFIRDRLLA-----LGFPPEKVHVHPIGVDTAKFTPATP-----------------ARRPPRILFVG 195 (367)
T ss_pred HHHHhcCEEEECCHHHHHHHHH-----cCCCHHHeEEecCCCCHHhcCCCCC-----------------CCCCcEEEEEE
Confidence 4457889999999988887554 3677788999999999876653221 23567889999
Q ss_pred cccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHh
Q 023290 92 SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLA 169 (284)
Q Consensus 92 ~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~ 169 (284)
++.+.||++.+++++..+.+ +.++++|+++|.++ ..+.++..++++++.++|.|+|.+ +++..+|+
T Consensus 196 ~~~~~K~~~~li~a~~~l~~-------~~~~~~l~ivG~g~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~ 263 (367)
T cd05844 196 RFVEKKGPLLLLEAFARLAR-------RVPEVRLVIIGDGP-----LLAALEALARALGLGGRVTFLGAQPHAEVRELMR 263 (367)
T ss_pred eeccccChHHHHHHHHHHHH-------hCCCeEEEEEeCch-----HHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHH
Confidence 99999999999999998865 23799999999875 667889999998888999999987 67999999
Q ss_pred hccEEEEcCCC----CcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHH
Q 023290 170 AIDVLVQNSQA----WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRL 245 (284)
Q Consensus 170 ~ad~~~~ps~~----~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~ 245 (284)
.||++++||.. ..||+|++++|||+||+|||+++.++..+++.++.+|+++++.| +++++++|.+++++++.+.
T Consensus 264 ~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~d--~~~l~~~i~~l~~~~~~~~ 341 (367)
T cd05844 264 RARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPEGD--VAALAAALGRLLADPDLRA 341 (367)
T ss_pred hCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECCCC--HHHHHHHHHHHHcCHHHHH
Confidence 99999999862 14899999999999999999999999999999999999999888 9999999999999999999
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHH
Q 023290 246 TMGKRGYERVKEIFQEHHMAERIAV 270 (284)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (284)
+++.++++.+.++|+|+.+++++.+
T Consensus 342 ~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 342 RMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999999999999999999999875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=238.56 Aligned_cols=234 Identities=24% Similarity=0.331 Sum_probs=198.7
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEec
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g 91 (284)
..+..+|.+++.|....+.+. +.++.+..++.++|||+|.+.+........ ....++++++.+++.++++++|
T Consensus 120 ~~~~~~~~vi~~s~~~~~~~~----~~~~~~~~k~~~i~ngi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~G 192 (355)
T cd03819 120 AIMARGDRVIAVSNFIADHIR----ENYGVDPDRIRVIPRGVDLDRFDPGAVPPE---RILALAREWPLPKGKPVILLPG 192 (355)
T ss_pred HHHHhcCEEEEeCHHHHHHHH----HhcCCChhhEEEecCCccccccCccccchH---HHHHHHHHcCCCCCceEEEEee
Confidence 345678999999998888755 347788889999999999887754332111 1233678888888889999999
Q ss_pred cccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhc
Q 023290 92 SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAI 171 (284)
Q Consensus 92 ~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~a 171 (284)
++.+.||++.+++++..+.. ..++++++++|.+.... .+.+.+.+.++++++.++|.++|+.+++..+|+.|
T Consensus 193 r~~~~Kg~~~li~~~~~l~~-------~~~~~~l~ivG~~~~~~-~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l~~a 264 (355)
T cd03819 193 RLTRWKGQEVFIEALARLKK-------DDPDVHLLIVGDAQGRR-FYYAELLELIKRLGLQDRVTFVGHCSDMPAAYALA 264 (355)
T ss_pred ccccccCHHHHHHHHHHHHh-------cCCCeEEEEEECCcccc-hHHHHHHHHHHHcCCcceEEEcCCcccHHHHHHhC
Confidence 99999999999999998865 23789999999875432 35566677888888888999999999999999999
Q ss_pred cEEEEcC-CCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhh-CHHHHHHHHH
Q 023290 172 DVLVQNS-QAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVERRLTMGK 249 (284)
Q Consensus 172 d~~~~ps-~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~-~~~~~~~~~~ 249 (284)
|++++|| . .|++|++++|||++|+|||+++.++..+++.++.+|++++++| +++++++|..++. +++.+.++++
T Consensus 265 d~~i~ps~~--~e~~~~~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~--~~~l~~~i~~~~~~~~~~~~~~~~ 340 (355)
T cd03819 265 DIVVSASTE--PEAFGRTAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGD--AEALAQALDQILSLLPEGRAKMFA 340 (355)
T ss_pred CEEEecCCC--CCCCchHHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEeCCCC--HHHHHHHHHHHHhhCHHHHHHHHH
Confidence 9999999 5 8999999999999999999999999999999999999999988 9999999975554 8999999999
Q ss_pred HHHHHHHHhcCHHHH
Q 023290 250 RGYERVKEIFQEHHM 264 (284)
Q Consensus 250 ~~~~~~~~~~~~~~~ 264 (284)
++++.+.++|+|+.+
T Consensus 341 ~a~~~~~~~f~~~~~ 355 (355)
T cd03819 341 KARMCVETLFSYDRM 355 (355)
T ss_pred HHHHHHHHhhhhccC
Confidence 999999999999863
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-33 Score=248.83 Aligned_cols=250 Identities=17% Similarity=0.204 Sum_probs=193.0
Q ss_pred cccCCcccccccchhhHHHHHHHHH-----------HHh----cc--cCCCeEEEecCCccccchhhhhhhHHH-H----
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTR-----------ERL----RI--KMPDTYVVHLGNSKELMEVAEDNVAKR-V---- 69 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~-----------~~~----~~--~~~~i~vi~~g~~~~~~~~~~~~~~~~-~---- 69 (284)
..+..+|.+|+.|.....-.++.+. ..+ |+ +.+|+.|||+|+|...|.+........ .
T Consensus 448 ~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ 527 (784)
T TIGR02470 448 IAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPE 527 (784)
T ss_pred HHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcc
Confidence 3455688899988643221111110 111 22 557999999999998665533221110 0
Q ss_pred ------HHHHHHHHhCC--CCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCC----Ch-
Q 023290 70 ------LREHVRESLGV--RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA----QT- 136 (284)
Q Consensus 70 ------~~~~~r~~~~~--~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~----~~- 136 (284)
.+...++.+|+ ++++++|+++||+.+.||++.+++|+.++.. + .++++|+|+|++... +.
T Consensus 528 ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~-l------~~~~~LVIVGGg~~~~~s~d~e 600 (784)
T TIGR02470 528 IEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPK-L------RELVNLVVVAGKLDAKESKDRE 600 (784)
T ss_pred hhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHh-h------CCCeEEEEEeCCcccccccchh
Confidence 11234567776 5577889999999999999999999987643 1 157899999986421 11
Q ss_pred --HHHHHHHHHHHHcCCCCcEEEeccc---cCHHHHHh----hccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCc
Q 023290 137 --KFESELRNYVMQKKIQDRVHFVNKT---LTVAPYLA----AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGT 207 (284)
Q Consensus 137 --~~~~~l~~~~~~~~~~~~v~~~~~~---~~~~~~~~----~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~ 207 (284)
.....+..+++++++.++|.|+|.. .++.++|+ .+|++++||. +|+||++++|||+||+|||+|+.||.
T Consensus 601 e~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~--~EpFGLvvLEAMAcGlPVVAT~~GG~ 678 (784)
T TIGR02470 601 EQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPAL--YEAFGLTVLEAMTCGLPTFATRFGGP 678 (784)
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCc--ccCCCHHHHHHHHcCCCEEEcCCCCH
Confidence 2456788899999999999999964 45556664 3579999998 99999999999999999999999999
Q ss_pred ceeeecCCceeeecCCCCChHHHHHHHHHHh----hCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 023290 208 TEIVVNGTTGLLHPVGKEGITPLAKNIVKLA----THVERRLTMGKRGYERVKEIFQEHHMAERIAVVL 272 (284)
Q Consensus 208 ~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (284)
.|++.++.+|+++++.| +++++++|.+++ .|++.+.++++++++.+.++|+|+.+++++..+.
T Consensus 679 ~EiV~dg~tGfLVdp~D--~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 679 LEIIQDGVSGFHIDPYH--GEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHhcCCCcEEEeCCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999999999999998 999999999876 6999999999999999999999999999998876
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=238.04 Aligned_cols=217 Identities=20% Similarity=0.199 Sum_probs=180.0
Q ss_pred ccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCC
Q 023290 41 IKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEV 120 (284)
Q Consensus 41 ~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~ 120 (284)
.+..++ ++|||+|+......... ......+++++|++++.++|+++||+.+.||++.+++++..+.+ ..
T Consensus 151 ~~~~~~-vipngvd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~-------~~ 219 (372)
T cd03792 151 VPPRKV-IIPPSIDPLSGKNRELS---PADIEYILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKE-------RV 219 (372)
T ss_pred CCCceE-EeCCCCCCCccccCCCC---HHHHHHHHHHhCCCCCCcEEEEEeccccccCcHHHHHHHHHHHh-------hC
Confidence 444444 99999997531111100 11135678889998889999999999999999999999998865 23
Q ss_pred CCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc----cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcC
Q 023290 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT----LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQ 196 (284)
Q Consensus 121 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~----~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G 196 (284)
++++|+++|+++...+...+.++++.+..++.++|.++|.. +++..+|+.||+++.||. .||||++++|||+||
T Consensus 220 ~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~--~Eg~g~~~lEA~a~G 297 (372)
T cd03792 220 PDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQKSI--REGFGLTVTEALWKG 297 (372)
T ss_pred CCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhCeEEEeCCC--ccCCCHHHHHHHHcC
Confidence 78999999998654333444456666667777889998864 688899999999999998 999999999999999
Q ss_pred CCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 023290 197 LPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 274 (284)
Q Consensus 197 ~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (284)
+|||+++.++..+.+.++.+|+++++ .++++.+|.+++.+++.+++|++++++.+.++|+|+.+++++.++|++
T Consensus 298 ~Pvv~s~~~~~~~~i~~~~~g~~~~~----~~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 298 KPVIAGPVGGIPLQIEDGETGFLVDT----VEEAAVRILYLLRDPELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred CCEEEcCCCCchhhcccCCceEEeCC----cHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999874 678899999999999999999999999998899999999999999976
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=240.32 Aligned_cols=223 Identities=23% Similarity=0.259 Sum_probs=190.6
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecc
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 92 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~ 92 (284)
.++.+|.++++|....+++.+ .++...+++.+++||++...+.... ..++.+.++++|+
T Consensus 180 ~~~~~d~ii~~S~~~~~~l~~----~~~~~~~ki~vi~~gv~~~~~~~~~-----------------~~~~~~~il~~Gr 238 (407)
T cd04946 180 LLSSLDAVFPCSEQGRNYLQK----RYPAYKEKIKVSYLGVSDPGIISKP-----------------SKDDTLRIVSCSY 238 (407)
T ss_pred HHhcCCEEEECCHHHHHHHHH----HCCCccccEEEEECCcccccccCCC-----------------CCCCCEEEEEeec
Confidence 357899999999999988554 4777788999999999876543221 1246788999999
Q ss_pred ccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHhh
Q 023290 93 VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAA 170 (284)
Q Consensus 93 ~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~~ 170 (284)
+.+.||++.+++++..+.+..++ .+++++++|+|+ ..+.+++++++.+..++|.|+|++ +++.++|+.
T Consensus 239 l~~~Kg~~~li~a~~~l~~~~p~-----~~l~~~iiG~g~-----~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~ 308 (407)
T cd04946 239 LVPVKRVDLIIKALAALAKARPS-----IKIKWTHIGGGP-----LEDTLKELAESKPENISVNFTGELSNSEVYKLYKE 308 (407)
T ss_pred cccccCHHHHHHHHHHHHHhCCC-----ceEEEEEEeCch-----HHHHHHHHHHhcCCCceEEEecCCChHHHHHHHhh
Confidence 99999999999999998763210 257778899876 667888888888888899999997 578899975
Q ss_pred --ccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHH
Q 023290 171 --IDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMG 248 (284)
Q Consensus 171 --ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~ 248 (284)
+|++++||. .||+|++++|||++|+|||+|+.+|..|++.++.+|+++++.+ ++++++++|.++++|++.+.+|+
T Consensus 309 ~~~~v~v~~S~--~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~-~~~~la~~I~~ll~~~~~~~~m~ 385 (407)
T cd04946 309 NPVDVFVNLSE--SEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDP-TPNELVSSLSKFIDNEEEYQTMR 385 (407)
T ss_pred cCCCEEEeCCc--cccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCC-CHHHHHHHHHHHHhCHHHHHHHH
Confidence 789999998 9999999999999999999999999999999999999998752 29999999999999999999999
Q ss_pred HHHHHHHHHhcCHHHHHHHHH
Q 023290 249 KRGYERVKEIFQEHHMAERIA 269 (284)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~ 269 (284)
++|++.+.++|+|+...+++.
T Consensus 386 ~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 386 EKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHcCHHHhHHHhc
Confidence 999999999999999998875
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=238.01 Aligned_cols=235 Identities=18% Similarity=0.215 Sum_probs=192.9
Q ss_pred cCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccc
Q 023290 14 LPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSV 93 (284)
Q Consensus 14 ~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~ 93 (284)
.+.+|.++++|..+++.+++. ++. .+++.++++|++...+...+.. ..++..+++++|++
T Consensus 218 ~~~ad~ii~nS~~t~~~l~~~----~~~-~~~i~vvyp~vd~~~~~~~~~~---------------~~~~~~~il~vGR~ 277 (463)
T PLN02949 218 GRCAHLAMVNSSWTKSHIEAL----WRI-PERIKRVYPPCDTSGLQALPLE---------------RSEDPPYIISVAQF 277 (463)
T ss_pred cCCCCEEEECCHHHHHHHHHH----cCC-CCCeEEEcCCCCHHHcccCCcc---------------ccCCCCEEEEEEee
Confidence 478999999999998886542 333 3578999999987644221100 01245678899999
Q ss_pred cccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCC-CChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHhh
Q 023290 94 SRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMN-AQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAA 170 (284)
Q Consensus 94 ~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~-~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~~ 170 (284)
.+.||++.+++|+.++.+.+.+ ..++++|+|+|++.. ++.++.++++++++++++.++|.|+|.. +++..+|+.
T Consensus 278 ~~~Kg~~llI~A~~~l~~~~~~---~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g~v~~~el~~ll~~ 354 (463)
T PLN02949 278 RPEKAHALQLEAFALALEKLDA---DVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKNVSYRDLVRLLGG 354 (463)
T ss_pred eccCCHHHHHHHHHHHHHhccc---cCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeCCCCHHHHHHHHHh
Confidence 9999999999999988664432 237899999998743 2234668899999999999999999986 789999999
Q ss_pred ccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcc-eeeec---CCceeeecCCCCChHHHHHHHHHHhh-CHHHHH
Q 023290 171 IDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTT-EIVVN---GTTGLLHPVGKEGITPLAKNIVKLAT-HVERRL 245 (284)
Q Consensus 171 ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~-e~v~~---~~~g~~~~~~d~~~~~~~~~i~~l~~-~~~~~~ 245 (284)
||+++.|+. .|+||++++|||++|+|||+++.+|.. +++.+ +.+|++++ | +++++++|.++++ +++.++
T Consensus 355 a~~~v~~s~--~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~--~~~la~ai~~ll~~~~~~r~ 428 (463)
T PLN02949 355 AVAGLHSMI--DEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--T--VEEYADAILEVLRMRETERL 428 (463)
T ss_pred CcEEEeCCc--cCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC--C--HHHHHHHHHHHHhCCHHHHH
Confidence 999999998 999999999999999999999998864 67655 56898874 4 9999999999998 678899
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Q 023290 246 TMGKRGYERVKEIFQEHHMAERIAVVLKEVLKK 278 (284)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (284)
+|++++++.+ ++|||+.+.+++.+.++++++.
T Consensus 429 ~m~~~ar~~~-~~FS~e~~~~~~~~~i~~l~~~ 460 (463)
T PLN02949 429 EIAAAARKRA-NRFSEQRFNEDFKDAIRPILNS 460 (463)
T ss_pred HHHHHHHHHH-HHcCHHHHHHHHHHHHHHHHhh
Confidence 9999999998 4699999999999999998875
|
|
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=233.16 Aligned_cols=233 Identities=26% Similarity=0.378 Sum_probs=200.7
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEec
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g 91 (284)
...+.++.++++|....+.+.+ ++.+.+++.+++||++...+...... ....+++++++++.++++++|
T Consensus 132 ~~~~~~~~~i~~s~~~~~~~~~-----~~~~~~~~~vi~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~G 200 (365)
T cd03807 132 LLSSFIPLIVANSAAAAEYHQA-----IGYPPKKIVVIPNGVDTERFSPDLDA------RARLREELGLPEDTFLIGIVA 200 (365)
T ss_pred HhccccCeEEeccHHHHHHHHH-----cCCChhheeEeCCCcCHHhcCCcccc------hHHHHHhcCCCCCCeEEEEec
Confidence 3445678788888888776554 36777899999999998766543322 245667889988899999999
Q ss_pred cccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHH-HcCCCCcEEEeccccCHHHHHhh
Q 023290 92 SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVM-QKKIQDRVHFVNKTLTVAPYLAA 170 (284)
Q Consensus 92 ~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~-~~~~~~~v~~~~~~~~~~~~~~~ 170 (284)
++.+.||++.+++++..+.+. .++++|+++|.+. ....++.... +.++.++|.++|..+++..+|+.
T Consensus 201 ~~~~~K~~~~li~a~~~l~~~-------~~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 268 (365)
T cd03807 201 RLHPQKDHATLLRAAALLLKK-------FPNARLLLVGDGP-----DRANLELLALKELGLEDKVILLGERSDVPALLNA 268 (365)
T ss_pred ccchhcCHHHHHHHHHHHHHh-------CCCeEEEEecCCc-----chhHHHHHHHHhcCCCceEEEccccccHHHHHHh
Confidence 999999999999999988663 3889999999876 3344555555 77888899999988999999999
Q ss_pred ccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHH
Q 023290 171 IDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKR 250 (284)
Q Consensus 171 ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~ 250 (284)
||++++||. .|++|++++|||+||+|||+++.++..+++.+ +|++++++| +++++++|.+++++++.+.+++++
T Consensus 269 adi~v~ps~--~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~~ 342 (365)
T cd03807 269 LDVFVLSSL--SEGFPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLVPPGD--PEALAEAIEALLADPALRQALGEA 342 (365)
T ss_pred CCEEEeCCc--cccCCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEeCCCC--HHHHHHHHHHHHhChHHHHHHHHH
Confidence 999999999 79999999999999999999999999999966 899999888 999999999999999999999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHH
Q 023290 251 GYERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~ 273 (284)
+++.+.++|+|+.+++++.++|+
T Consensus 343 ~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 343 ARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HHHHHHHhCCHHHHHHHHHHHhC
Confidence 99999999999999999999874
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=231.52 Aligned_cols=228 Identities=24% Similarity=0.374 Sum_probs=192.0
Q ss_pred cccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecccccc
Q 023290 17 VAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRG 96 (284)
Q Consensus 17 ~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~~~ 96 (284)
++.+++.|....++ +.+..+.+.+++.++|||+|...+...... ...+++++++++++++++++|++.+.
T Consensus 131 ~~~~~~~s~~~~~~----~~~~~~~~~~~~~~i~ng~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~g~~~~~ 200 (360)
T cd04951 131 SDLTTNVSKEALDY----FIASKAFNANKSFVVYNGIDTDRFRKDPAR------RLKIRNALGVKNDTFVILAVGRLVEA 200 (360)
T ss_pred cCceEEEcHHHHHH----HHhccCCCcccEEEEccccchhhcCcchHH------HHHHHHHcCcCCCCEEEEEEeeCchh
Confidence 44555556555554 333345677899999999998766543221 35578888988888999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhccEEEE
Q 023290 97 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQ 176 (284)
Q Consensus 97 k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad~~~~ 176 (284)
||++.+++++.++.+ +.++++|+++|+++ ..+.+++.+++++..++|.++|+.+++..+|+.||++++
T Consensus 201 kg~~~li~a~~~l~~-------~~~~~~l~i~G~g~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~ 268 (360)
T cd04951 201 KDYPNLLKAFAKLLS-------DYLDIKLLIAGDGP-----LRATLERLIKALGLSNRVKLLGLRDDIAAYYNAADLFVL 268 (360)
T ss_pred cCcHHHHHHHHHHHh-------hCCCeEEEEEcCCC-----cHHHHHHHHHhcCCCCcEEEecccccHHHHHHhhceEEe
Confidence 999999999998865 33789999999876 567788888888888899999999999999999999999
Q ss_pred cCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhh-CHHHHHHHHHHHHHHH
Q 023290 177 NSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVERRLTMGKRGYERV 255 (284)
Q Consensus 177 ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~ 255 (284)
||. .|++|++++|||++|+|||+++.++..+++++ +|++++++| +++++++|.++++ +++.+..+..+ ++.+
T Consensus 269 ~s~--~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~--~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~ 341 (360)
T cd04951 269 SSA--WEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVPISD--PEALANKIDEILKMSGEERDIIGAR-RERI 341 (360)
T ss_pred ccc--ccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeCCCC--HHHHHHHHHHHHhCCHHHHHHHHHH-HHHH
Confidence 999 89999999999999999999999999999966 789999888 9999999999995 66666666665 7788
Q ss_pred HHhcCHHHHHHHHHHHHH
Q 023290 256 KEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~ 273 (284)
.++|+|+.+++++.++|+
T Consensus 342 ~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 342 VKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHhcCHHHHHHHHHHHhh
Confidence 889999999999999985
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=235.18 Aligned_cols=235 Identities=26% Similarity=0.300 Sum_probs=199.7
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecc
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 92 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~ 92 (284)
.++.+|.+++.|....+.+.+. ++.+..++.++|||+|.+.+...... ...++.++..+++++|+++|+
T Consensus 160 ~~~~ad~ii~~s~~~~~~~~~~----~~~~~~~~~vi~ng~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~gr 228 (398)
T cd03800 160 LLRAADRVIASTPQEAEELYSL----YGAYPRRIRVVPPGVDLERFTPYGRA-------EARRARLLRDPDKPRILAVGR 228 (398)
T ss_pred HHhhCCEEEEcCHHHHHHHHHH----ccccccccEEECCCCCccceecccch-------hhHHHhhccCCCCcEEEEEcc
Confidence 4568999999999887775443 44555679999999998876554321 122555666677899999999
Q ss_pred ccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCCh-HHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHh
Q 023290 93 VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQT-KFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLA 169 (284)
Q Consensus 93 ~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~-~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~ 169 (284)
+.+.||++.+++++..+.+. .++++|+++|++..... .....++.+++++++.+++.++|++ +++..+|+
T Consensus 229 ~~~~k~~~~ll~a~~~l~~~-------~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 301 (398)
T cd03800 229 LDPRKGIDTLIRAYAELPEL-------RERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYR 301 (398)
T ss_pred cccccCHHHHHHHHHHHHHh-------CCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHH
Confidence 99999999999999988652 37899999998764322 1345577888888988899999996 68999999
Q ss_pred hccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHH
Q 023290 170 AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGK 249 (284)
Q Consensus 170 ~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~ 249 (284)
.||++++||. .|++|++++|||++|+|||+++.++..+++.++.+|++++++| +++++++|.+++++++.+.++++
T Consensus 302 ~adi~l~ps~--~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~ 377 (398)
T cd03800 302 AADVFVNPAL--YEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRD--PEALAAALRRLLTDPALRRRLSR 377 (398)
T ss_pred hCCEEEeccc--ccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHH
Confidence 9999999998 8999999999999999999999999999999999999999988 99999999999999999999999
Q ss_pred HHHHHHHHhcCHHHHHHHHH
Q 023290 250 RGYERVKEIFQEHHMAERIA 269 (284)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~ 269 (284)
++++.+.++|+|+.+++++.
T Consensus 378 ~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 378 AGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHhCCHHHHHHHHh
Confidence 99999989999999999875
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=236.89 Aligned_cols=235 Identities=25% Similarity=0.312 Sum_probs=193.9
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhcccC-CCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEec
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKM-PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~-~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g 91 (284)
.++.+|.++++|..+.+++.+. ++... .++.+|+||+|.+.+.+.... ..++.....++.++++++|
T Consensus 151 ~~~~ad~ii~~s~~~~~~~~~~----~~~~~~~~~~vi~n~vd~~~~~~~~~~--------~~~~~~~~~~~~~~i~~~g 218 (392)
T cd03805 151 TTGMADKIVVNSNFTASVFKKT----FPSLAKNPREVVYPCVDTDSFESTSED--------PDPGLLIPKSGKKTFLSIN 218 (392)
T ss_pred HhhCceEEEEcChhHHHHHHHH----hcccccCCcceeCCCcCHHHcCccccc--------ccccccccCCCceEEEEEe
Confidence 3677999999999988876553 33333 334699999998876543321 1223334556788999999
Q ss_pred cccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCC---hHHHHHHHHHHHH-cCCCCcEEEeccc--cCHH
Q 023290 92 SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ---TKFESELRNYVMQ-KKIQDRVHFVNKT--LTVA 165 (284)
Q Consensus 92 ~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~---~~~~~~l~~~~~~-~~~~~~v~~~~~~--~~~~ 165 (284)
++.+.||++.+++++.++.+... ..++++|+++|+++... ..+.+.+++.+++ +++.++|.|+|++ +++.
T Consensus 219 rl~~~Kg~~~ll~a~~~l~~~~~----~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~ 294 (392)
T cd03805 219 RFERKKNIALAIEAFAILKDKLA----EFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKE 294 (392)
T ss_pred eecccCChHHHHHHHHHHHhhcc----cccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHH
Confidence 99999999999999999866321 01689999999875432 2356788889998 8999999999997 5678
Q ss_pred HHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHH
Q 023290 166 PYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRL 245 (284)
Q Consensus 166 ~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~ 245 (284)
.+|+.||++++||. .|+||++++|||+||+|||+++.++..+++.++.+|+++++ | +++++++|.+++++++.+.
T Consensus 295 ~~l~~ad~~l~~s~--~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~--~~~~a~~i~~l~~~~~~~~ 369 (392)
T cd03805 295 LLLSSARALLYTPS--NEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-T--PEEFAEAMLKLANDPDLAD 369 (392)
T ss_pred HHHhhCeEEEECCC--cCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-C--HHHHHHHHHHHHhChHHHH
Confidence 99999999999998 89999999999999999999999999999999999999976 5 8999999999999999999
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHH
Q 023290 246 TMGKRGYERVKEIFQEHHMAERI 268 (284)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~ 268 (284)
++++++++.+.++|+|+.+++++
T Consensus 370 ~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 370 RMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHHHHHHHHHHHhcCHHHHhhhC
Confidence 99999999999999999998764
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-32 Score=238.10 Aligned_cols=240 Identities=20% Similarity=0.206 Sum_probs=193.9
Q ss_pred ccCCcccccccchhhHHHHHHH-----HHHHhcccCCCeEEEecCCccccchhhhhhh-----------HHHHHHHHHHH
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNR-----TRERLRIKMPDTYVVHLGNSKELMEVAEDNV-----------AKRVLREHVRE 76 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~-----~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~-----------~~~~~~~~~r~ 76 (284)
.+..+|.++++|...++.+... +...+.....++.+|+||+|.+.+.+..+.. .+...+..+++
T Consensus 207 ~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~ 286 (476)
T cd03791 207 GIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQE 286 (476)
T ss_pred HHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHH
Confidence 3567899999999888775431 1222334568999999999998887643321 12344577899
Q ss_pred HhCCC--CCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCc
Q 023290 77 SLGVR--NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR 154 (284)
Q Consensus 77 ~~~~~--~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~ 154 (284)
++|++ ++.++|+++||+.+.||++.+++++..+.+ .+++|+++|.+.. .+.+.++++.+++ .++
T Consensus 287 ~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~---------~~~~lvi~G~g~~---~~~~~~~~~~~~~--~~~ 352 (476)
T cd03791 287 ELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLE---------LGGQLVILGSGDP---EYEEALRELAARY--PGR 352 (476)
T ss_pred HcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHH---------cCcEEEEEecCCH---HHHHHHHHHHHhC--CCc
Confidence 99985 678999999999999999999999998765 5599999998742 2556777777765 457
Q ss_pred EEEecc-c-cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCC------ceeeecCCCCC
Q 023290 155 VHFVNK-T-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGT------TGLLHPVGKEG 226 (284)
Q Consensus 155 v~~~~~-~-~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~------~g~~~~~~d~~ 226 (284)
+.+++. . +.+..+|+.||++++||. +|+||++++|||+||+|||+++.++..+++.++. +|+++++.|
T Consensus 353 v~~~~~~~~~~~~~~~~~aDv~l~pS~--~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~-- 428 (476)
T cd03791 353 VAVLIGYDEALAHLIYAGADFFLMPSR--FEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYN-- 428 (476)
T ss_pred EEEEEeCCHHHHHHHHHhCCEEECCCC--CCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCC--
Confidence 776544 4 445689999999999999 8999999999999999999999999999999987 999999998
Q ss_pred hHHHHHHHHHHhh---CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 023290 227 ITPLAKNIVKLAT---HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 227 ~~~~~~~i~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (284)
+++++++|.++++ +++.+.++++++++ +.|+|+.+++++.++|+
T Consensus 429 ~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~---~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 429 ADALLAALRRALALYRDPEAWRKLQRNAMA---QDFSWDRSAKEYLELYR 475 (476)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHhc---cCCChHHHHHHHHHHHh
Confidence 9999999999875 67777777776654 57999999999999986
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-31 Score=238.74 Aligned_cols=219 Identities=18% Similarity=0.259 Sum_probs=175.0
Q ss_pred CCCeEEEecCCccccchhhhhhhHH-----------HHHHHHHHHHhCC--CCCCeEEEEeccccccccHHHHHHHHHHH
Q 023290 43 MPDTYVVHLGNSKELMEVAEDNVAK-----------RVLREHVRESLGV--RNEDLLFAIINSVSRGKGQDLFLHSFYES 109 (284)
Q Consensus 43 ~~~i~vi~~g~~~~~~~~~~~~~~~-----------~~~~~~~r~~~~~--~~~~~~i~~~g~~~~~k~~~~~~~a~~~l 109 (284)
.+++.|||+|+|...|.+......+ .......++.+|+ ++++++|+++||+.+.||++.+++|+.++
T Consensus 519 ~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l 598 (815)
T PLN00142 519 DPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKN 598 (815)
T ss_pred ccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHH
Confidence 5689999999999866542211100 0001223455675 44567899999999999999999999877
Q ss_pred HHHHHhhccCCCCeEEEEEecCC-CC---ChH---HHHHHHHHHHHcCCCCcEEEeccc------cCHHHHHh-hccEEE
Q 023290 110 LELIKEKKLEVPSVHAVIIGSDM-NA---QTK---FESELRNYVMQKKIQDRVHFVNKT------LTVAPYLA-AIDVLV 175 (284)
Q Consensus 110 ~~~~~~~~~~~~~~~l~i~G~~~-~~---~~~---~~~~l~~~~~~~~~~~~v~~~~~~------~~~~~~~~-~ad~~~ 175 (284)
.+. .++++|+|+|++. +. ..+ ....+.++++++++.++|.|+|.. .++..+++ .+|+++
T Consensus 599 ~~l-------~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfV 671 (815)
T PLN00142 599 KRL-------RELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFV 671 (815)
T ss_pred HHh-------CCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEE
Confidence 441 2689999999862 11 111 235678889999999999999863 24555555 579999
Q ss_pred EcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHH----hhCHHHHHHHHHHH
Q 023290 176 QNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKL----ATHVERRLTMGKRG 251 (284)
Q Consensus 176 ~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l----~~~~~~~~~~~~~~ 251 (284)
+||. +|+||++++|||+||+|||+|+.||..|++.++.+|+++++.| +++++++|.++ +.|++.++++++++
T Consensus 672 lPS~--~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D--~eaLA~aI~~lLekLl~Dp~lr~~mg~~A 747 (815)
T PLN00142 672 QPAL--YEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYH--GDEAANKIADFFEKCKEDPSYWNKISDAG 747 (815)
T ss_pred eCCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 9998 9999999999999999999999999999999999999999998 99999998765 46999999999999
Q ss_pred HHHHHHhcCHHHHHHHHHHHH
Q 023290 252 YERVKEIFQEHHMAERIAVVL 272 (284)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~ 272 (284)
++.+.++|||+.+++++.++.
T Consensus 748 r~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 748 LQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999999999876
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=229.41 Aligned_cols=219 Identities=21% Similarity=0.331 Sum_probs=188.0
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEec
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g 91 (284)
..+..+|.+++.|....+.+.+. ++.. .++.++|||++...+..... .......++++|
T Consensus 153 ~~~~~~d~ii~~s~~~~~~l~~~----~~~~-~~v~~ip~g~~~~~~~~~~~----------------~~~~~~~i~~vg 211 (372)
T cd04949 153 ENLDKVDGVIVATEQQKQDLQKQ----FGNY-NPIYTIPVGSIDPLKLPAQF----------------KQRKPHKIITVA 211 (372)
T ss_pred hChhhCCEEEEccHHHHHHHHHH----hCCC-CceEEEcccccChhhcccch----------------hhcCCCeEEEEE
Confidence 44678899999999888875543 4432 34899999999876543210 113556788999
Q ss_pred cccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhc
Q 023290 92 SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAI 171 (284)
Q Consensus 92 ~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~a 171 (284)
++.+.||++.+++++..+.+ +.++++|+++|.+. ....+...++++++.++|.+.|..+++..+|+.|
T Consensus 212 rl~~~K~~~~li~a~~~l~~-------~~~~~~l~i~G~g~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~a 279 (372)
T cd04949 212 RLAPEKQLDQLIKAFAKVVK-------QVPDATLDIYGYGD-----EEEKLKELIEELGLEDYVFLKGYTRDLDEVYQKA 279 (372)
T ss_pred ccCcccCHHHHHHHHHHHHH-------hCCCcEEEEEEeCc-----hHHHHHHHHHHcCCcceEEEcCCCCCHHHHHhhh
Confidence 99999999999999999876 34899999999986 4567778888889999999999889999999999
Q ss_pred cEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC-CcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHH
Q 023290 172 DVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG-GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKR 250 (284)
Q Consensus 172 d~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~-~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~ 250 (284)
|+++.||. .||||++++|||++|+|||+++.+ +..+++.++.+|++++++| +++++++|..++++++.+.+++++
T Consensus 280 d~~v~~S~--~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d--~~~la~~i~~ll~~~~~~~~~~~~ 355 (372)
T cd04949 280 QLSLLTSQ--SEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGD--IEALAEAIIELLNDPKLLQKFSEA 355 (372)
T ss_pred hEEEeccc--ccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCc--HHHHHHHHHHHHcCHHHHHHHHHH
Confidence 99999999 899999999999999999999987 7899999999999999988 999999999999999999999999
Q ss_pred HHHHHHHhcCHHHHHHHH
Q 023290 251 GYERVKEIFQEHHMAERI 268 (284)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~ 268 (284)
+++.+ ++|+|+.++++|
T Consensus 356 a~~~~-~~~s~~~~~~~w 372 (372)
T cd04949 356 AYENA-ERYSEENVWEKW 372 (372)
T ss_pred HHHHH-HHhhHHHHHhcC
Confidence 99984 679999998764
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=227.45 Aligned_cols=224 Identities=27% Similarity=0.315 Sum_probs=195.2
Q ss_pred cccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEE
Q 023290 10 YVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 89 (284)
Q Consensus 10 ~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~ 89 (284)
....++.+|.+++.|....+++.+. ++.+..++.++|||+|.+.+.... .....+.+.+++
T Consensus 124 ~~~~~~~~~~vi~~s~~~~~~l~~~----~~~~~~~~~vi~~~~d~~~~~~~~---------------~~~~~~~~~i~~ 184 (355)
T cd03799 124 LDEKLARADFVVAISEYNRQQLIRL----LGCDPDKIHVVHCGVDLERFPPRP---------------PPPPGEPLRILS 184 (355)
T ss_pred HHHHHhhCCEEEECCHHHHHHHHHh----cCCCcccEEEEeCCcCHHHcCCcc---------------ccccCCCeEEEE
Confidence 3455678999999999988875553 567788999999999987665432 011346678899
Q ss_pred eccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHH
Q 023290 90 INSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPY 167 (284)
Q Consensus 90 ~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~ 167 (284)
+|++.+.||++.+++++..+.+ +.++++++++|.+. ..+.+++.++++++.++|.+.|+. +++..+
T Consensus 185 ~g~~~~~k~~~~l~~~~~~l~~-------~~~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~ 252 (355)
T cd03799 185 VGRLVEKKGLDYLLEALALLKD-------RGIDFRLDIVGDGP-----LRDELEALIAELGLEDRVTLLGAKSQEEVREL 252 (355)
T ss_pred EeeeccccCHHHHHHHHHHHhh-------cCCCeEEEEEECCc-----cHHHHHHHHHHcCCCCeEEECCcCChHHHHHH
Confidence 9999999999999999998765 33799999999876 567788888888888899999997 789999
Q ss_pred HhhccEEEEcCCCCc------CccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCH
Q 023290 168 LAAIDVLVQNSQAWG------ECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHV 241 (284)
Q Consensus 168 ~~~ad~~~~ps~~~~------e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~ 241 (284)
|+.||++++||. . |++|++++|||++|+|||+++.++..+++.++.+|++++++| +++++++|.++++++
T Consensus 253 ~~~adi~l~~s~--~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~--~~~l~~~i~~~~~~~ 328 (355)
T cd03799 253 LRAADLFVLPSV--TAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVPPGD--PEALADAIERLLDDP 328 (355)
T ss_pred HHhCCEEEecce--ecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeCCCC--HHHHHHHHHHHHhCH
Confidence 999999999998 6 999999999999999999999999999999998999999888 999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 023290 242 ERRLTMGKRGYERVKEIFQEHHMAERI 268 (284)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (284)
+.+.++++++++.+.++|+|+.+++++
T Consensus 329 ~~~~~~~~~a~~~~~~~~s~~~~~~~l 355 (355)
T cd03799 329 ELRREMGEAGRARVEEEFDIRKQAARL 355 (355)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHhhcC
Confidence 999999999999999999999988753
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-31 Score=227.39 Aligned_cols=227 Identities=16% Similarity=0.159 Sum_probs=178.7
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecc
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 92 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~ 92 (284)
.++.+|.++++|....+.+.+. .+....++.+||||+|.+.+.+.... .-.+.++..+++|+|+
T Consensus 169 ~~~~ad~vi~~S~~~~~~l~~~----~~~~~~~v~vipngvd~~~f~~~~~~------------~~~~~~~~~~ilf~G~ 232 (397)
T TIGR03087 169 IAARFDAATFVSRAEAELFRRL----APEAAGRITAFPNGVDADFFSPDRDY------------PNPYPPGKRVLVFTGA 232 (397)
T ss_pred HHhhCCeEEEcCHHHHHHHHHh----CCCCCCCeEEeecccchhhcCCCccc------------cCCCCCCCcEEEEEEe
Confidence 4568999999999988875542 34456789999999999877543211 0012235578899999
Q ss_pred ccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhcc
Q 023290 93 VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAID 172 (284)
Q Consensus 93 ~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad 172 (284)
+.+.||++.++.++..+...+.+ ..++++|+|+|+++. ..+ ++++..++|.|+|+++++..+|+.||
T Consensus 233 l~~~k~~~~l~~~~~~~~~~l~~---~~p~~~l~ivG~g~~------~~~----~~l~~~~~V~~~G~v~~~~~~~~~ad 299 (397)
T TIGR03087 233 MDYWPNIDAVVWFAERVFPAVRA---RRPAAEFYIVGAKPS------PAV----RALAALPGVTVTGSVADVRPYLAHAA 299 (397)
T ss_pred cCCccCHHHHHHHHHHHHHHHHH---HCCCcEEEEECCCCh------HHH----HHhccCCCeEEeeecCCHHHHHHhCC
Confidence 99999999998655544333332 238999999998752 222 33344568999999999999999999
Q ss_pred EEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHH
Q 023290 173 VLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGY 252 (284)
Q Consensus 173 ~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 252 (284)
++++||. +.||+|++++|||+||+|||+|+.++. .+...+.+|+++. +| +++++++|.++++|++.+++|+++++
T Consensus 300 v~v~Ps~-~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv~-~~--~~~la~ai~~ll~~~~~~~~~~~~ar 374 (397)
T TIGR03087 300 VAVAPLR-IARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLVA-AD--PADFAAAILALLANPAEREELGQAAR 374 (397)
T ss_pred EEEeccc-ccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEeC-CC--HHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 9999997 268999999999999999999987543 3333455788886 66 99999999999999999999999999
Q ss_pred HHHHHhcCHHHHHHHHHHHHH
Q 023290 253 ERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~ 273 (284)
+.+.++|+|+.+++++.++|.
T Consensus 375 ~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 375 RRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHhCCHHHHHHHHHHHhc
Confidence 999999999999999999874
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-31 Score=225.79 Aligned_cols=215 Identities=20% Similarity=0.236 Sum_probs=181.4
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecc
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 92 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~ 92 (284)
....++.+++.|....+++... ....++.+||||+|...+...+.. ...++..+..+++++|+++|+
T Consensus 134 ~~~~~~~~i~~s~~~~~~~~~~------~~~~~~~vi~ngvd~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~vGr 200 (358)
T cd03812 134 INRLATDYLACSEEAGKWLFGK------VKNKKFKVIPNGIDLEKFIFNEEI-------RKKRRELGILEDKFVIGHVGR 200 (358)
T ss_pred HHhcCCEEEEcCHHHHHHHHhC------CCcccEEEEeccCcHHHcCCCchh-------hhHHHHcCCCCCCEEEEEEec
Confidence 3567888999999888875442 456789999999998876544321 112566777778899999999
Q ss_pred ccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhcc
Q 023290 93 VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAID 172 (284)
Q Consensus 93 ~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad 172 (284)
+.+.||++.+++++..+.+ ..++++++++|+++ ..+.+++.++++++.++|.++|..+++.++|+.||
T Consensus 201 ~~~~Kg~~~li~a~~~l~~-------~~~~~~l~ivG~g~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad 268 (358)
T cd03812 201 FSEQKNHEFLIEIFAELLK-------KNPNAKLLLVGDGE-----LEEEIKKKVKELGLEDKVIFLGVRNDVPELLQAMD 268 (358)
T ss_pred cccccChHHHHHHHHHHHH-------hCCCeEEEEEeCCc-----hHHHHHHHHHhcCCCCcEEEecccCCHHHHHHhcC
Confidence 9999999999999999876 34899999999886 56788888889999999999999899999999999
Q ss_pred EEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHH
Q 023290 173 VLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGY 252 (284)
Q Consensus 173 ~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 252 (284)
++++||. .|++|++++|||++|+|||+++.++..+.+.+ ..+++..+++ +++++++|.+++++++.++.+...+.
T Consensus 269 i~v~ps~--~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~--~~~~a~~i~~l~~~~~~~~~~~~~~~ 343 (358)
T cd03812 269 VFLFPSL--YEGLPLVLIEAQASGLPCILSDTITKEVDLTD-LVKFLSLDES--PEIWAEEILKLKSEDRRERSSESIKK 343 (358)
T ss_pred EEEeccc--ccCCCHHHHHHHHhCCCEEEEcCCchhhhhcc-CccEEeCCCC--HHHHHHHHHHHHhCcchhhhhhhhhh
Confidence 9999999 89999999999999999999999999999988 4556665555 89999999999999999988888777
Q ss_pred HHHHH
Q 023290 253 ERVKE 257 (284)
Q Consensus 253 ~~~~~ 257 (284)
.....
T Consensus 344 ~~~~~ 348 (358)
T cd03812 344 KGLDA 348 (358)
T ss_pred ccchh
Confidence 65543
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-31 Score=226.64 Aligned_cols=221 Identities=16% Similarity=0.166 Sum_probs=181.5
Q ss_pred cCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccc
Q 023290 14 LPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSV 93 (284)
Q Consensus 14 ~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~ 93 (284)
+..+|.++++|..+.+++.+ ++.+.+++.++|||+|.+.+..... ..+++++++++|++
T Consensus 131 ~~~~d~~i~~S~~~~~~~~~-----~~~~~~ki~vi~N~id~~~~~~~~~----------------~~~~~~~i~~~Grl 189 (359)
T PRK09922 131 ITCADYHLAISSGIKEQMMA-----RGISAQRISVIYNPVEIKTIIIPPP----------------ERDKPAVFLYVGRL 189 (359)
T ss_pred hhcCCEEEEcCHHHHHHHHH-----cCCCHHHEEEEcCCCCHHHccCCCc----------------ccCCCcEEEEEEEE
Confidence 47889999999988877543 4677789999999998653321110 01346788999998
Q ss_pred cc--cccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEecccc----CHHHH
Q 023290 94 SR--GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL----TVAPY 167 (284)
Q Consensus 94 ~~--~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~----~~~~~ 167 (284)
.+ .||++.+++++.++. ++++|+++|+|+ ..+.+++.++++++.++|.|+|+++ ++..+
T Consensus 190 ~~~~~k~~~~l~~a~~~~~----------~~~~l~ivG~g~-----~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~ 254 (359)
T PRK09922 190 KFEGQKNVKELFDGLSQTT----------GEWQLHIIGDGS-----DFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQK 254 (359)
T ss_pred ecccCcCHHHHHHHHHhhC----------CCeEEEEEeCCc-----cHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHH
Confidence 64 599999999998752 579999999986 5678999999999999999999863 46777
Q ss_pred HhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcC-CCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHH
Q 023290 168 LAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA-AGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLT 246 (284)
Q Consensus 168 ~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~-~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~ 246 (284)
|..||++++||. +||||++++||||||+|||+++ .++..|++.++.+|++++++| +++++++|.+++++++.+.
T Consensus 255 ~~~~d~~v~~s~--~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d--~~~la~~i~~l~~~~~~~~- 329 (359)
T PRK09922 255 IKNVSALLLTSK--FEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGN--IDEFVGKLNKVISGEVKYQ- 329 (359)
T ss_pred HhcCcEEEECCc--ccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCC--HHHHHHHHHHHHhCcccCC-
Confidence 888999999999 8999999999999999999999 899999999999999999998 9999999999999987541
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 023290 247 MGKRGYERVKEIFQEHHMAERIAVVLKEVLK 277 (284)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (284)
.++......+|+.+.+.+++.++|.+++.
T Consensus 330 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 330 --HDAIPNSIERFYEVLYFKNLNNALFSKLQ 358 (359)
T ss_pred --HHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 22222334568889999999999988764
|
|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-31 Score=223.30 Aligned_cols=226 Identities=23% Similarity=0.284 Sum_probs=188.6
Q ss_pred cCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccc
Q 023290 14 LPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSV 93 (284)
Q Consensus 14 ~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~ 93 (284)
+..++.+++.+......... .....++.++|||++.+.+...... .. ++.++.+++.++++++|++
T Consensus 147 ~~~~~~i~~~s~~~~~~~~~------~~~~~~~~vi~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~i~~~G~~ 212 (375)
T cd03821 147 LQAAAAVHATSEQEAAEIRR------LGLKAPIAVIPNGVDIPPFAALPSR-------GR-RRKFPILPDKRIILFLGRL 212 (375)
T ss_pred HhcCCEEEECCHHHHHHHHh------hCCcccEEEcCCCcChhccCcchhh-------hh-hhhccCCCCCcEEEEEeCc
Confidence 44566677776554443322 2556789999999998877654321 12 6777777888999999999
Q ss_pred cccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHhhc
Q 023290 94 SRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAI 171 (284)
Q Consensus 94 ~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~~a 171 (284)
.+.||++.+++++..+.+ +.++++|+++|.+... +...++..++++++.++|.++|++ +++..+|+.|
T Consensus 213 ~~~K~~~~li~a~~~l~~-------~~~~~~l~i~G~~~~~---~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 282 (375)
T cd03821 213 HPKKGLDLLIEAFAKLAE-------RFPDWHLVIAGPDEGG---YRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADA 282 (375)
T ss_pred chhcCHHHHHHHHHHhhh-------hcCCeEEEEECCCCcc---hHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhC
Confidence 999999999999998876 3389999999986532 455566666888888999999997 4899999999
Q ss_pred cEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHH
Q 023290 172 DVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRG 251 (284)
Q Consensus 172 d~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~ 251 (284)
|++++||. .|++|++++|||+||+|||+++.++..+++.+ ..|++++.+ +++++++|.+++++++.++++++++
T Consensus 283 dv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~i~~l~~~~~~~~~~~~~~ 356 (375)
T cd03821 283 DLFVLPSH--SENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDDD---VDALAAALRRALELPQRLKAMGENG 356 (375)
T ss_pred CEEEeccc--cCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCCC---hHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 99999999 89999999999999999999999999999988 788888754 6999999999999999999999999
Q ss_pred HHHHHHhcCHHHHHHHHH
Q 023290 252 YERVKEIFQEHHMAERIA 269 (284)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~ 269 (284)
++.+.++|+|+.+++++.
T Consensus 357 ~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 357 RALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHhcCHHHHHHHhh
Confidence 999899999999999875
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-31 Score=220.67 Aligned_cols=219 Identities=18% Similarity=0.183 Sum_probs=167.2
Q ss_pred cCCcccccccchhhHHHHHHHHHHHhccc-CCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecc
Q 023290 14 LPLVAGAMIDSHVTAEYWKNRTRERLRIK-MPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 92 (284)
Q Consensus 14 ~~~~~~~i~~s~~~~~~~~~~~~~~~~~~-~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~ 92 (284)
...+|.++++|..+.+.+.+ .+.+ .+++.+||||+|.+.+.+.... ....+++++.|+
T Consensus 92 ~~~ad~ii~~S~~~~~~l~~-----~g~~~~~~i~vIpNGVd~~~f~~~~~~----------------~~~~~vl~~~g~ 150 (331)
T PHA01630 92 NQPVDEIVVPSQWSKNAFYT-----SGLKIPQPIYVIPHNLNPRMFEYKPKE----------------KPHPCVLAILPH 150 (331)
T ss_pred hccCCEEEECCHHHHHHHHH-----cCCCCCCCEEEECCCCCHHHcCCCccc----------------cCCCEEEEEecc
Confidence 47799999999999887554 3444 4689999999998877543211 124567778889
Q ss_pred ccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhcc
Q 023290 93 VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAID 172 (284)
Q Consensus 93 ~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad 172 (284)
+.+.||++.+++|+..+.+ +.++++++++|++.. ...+ .++.. +......+++..+|+.||
T Consensus 151 ~~~~Kg~d~Li~A~~~l~~-------~~~~~~llivG~~~~-----~~~l------~~~~~-~~~~v~~~~l~~~y~~aD 211 (331)
T PHA01630 151 SWDRKGGDIVVKIFHELQN-------EGYDFYFLIKSSNML-----DPRL------FGLNG-VKTPLPDDDIYSLFAGCD 211 (331)
T ss_pred ccccCCHHHHHHHHHHHHh-------hCCCEEEEEEeCccc-----chhh------ccccc-eeccCCHHHHHHHHHhCC
Confidence 9999999999999998865 337899999996531 1111 12221 111122379999999999
Q ss_pred EEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCC-----------------CCChHHHHHHHH
Q 023290 173 VLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVG-----------------KEGITPLAKNIV 235 (284)
Q Consensus 173 ~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~-----------------d~~~~~~~~~i~ 235 (284)
++++||. .|+||++++||||||+|||+|+.++..|++.++.+|++++.+ +.+.+++++++.
T Consensus 212 v~v~pS~--~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~ii 289 (331)
T PHA01630 212 ILFYPVR--GGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDPDIEDAYQKLL 289 (331)
T ss_pred EEEECCc--cccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCCCHHHHHHHHH
Confidence 9999999 899999999999999999999999999999999888777532 112788899998
Q ss_pred HHhhCH--HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 023290 236 KLATHV--ERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 274 (284)
Q Consensus 236 ~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (284)
+++.++ +.++++..++...+.++|||+.+++++.++|++
T Consensus 290 ~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 290 EALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 988863 445555555556677889999999999999964
|
|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.3e-31 Score=222.90 Aligned_cols=222 Identities=28% Similarity=0.322 Sum_probs=187.5
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEec
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g 91 (284)
..+..+|.+++.|....+.+... . ....++.++|||++...+...... .. .....+.+.+.++++|
T Consensus 133 ~~~~~~d~vi~~s~~~~~~~~~~----~-~~~~~~~~i~~gi~~~~~~~~~~~------~~---~~~~~~~~~~~i~~~G 198 (357)
T cd03795 133 RFLRRADAIVATSPNYAETSPVL----R-RFRDKVRVIPLGLDPARYPRPDAL------EE---AIWRRAAGRPFFLFVG 198 (357)
T ss_pred HHHHhcCEEEeCcHHHHHHHHHh----c-CCccceEEecCCCChhhcCCcchh------hh---HhhcCCCCCcEEEEec
Confidence 35677899999999887764432 2 223789999999998876643321 00 2233455678899999
Q ss_pred cccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHh
Q 023290 92 SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLA 169 (284)
Q Consensus 92 ~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~ 169 (284)
++.+.||++.+++++.++ .+++++++|.+. ....+++.+++.+..++|.|+|++ +++..+|+
T Consensus 199 ~~~~~K~~~~li~a~~~l-----------~~~~l~i~G~g~-----~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~ 262 (357)
T cd03795 199 RLVYYKGLDVLLEAAAAL-----------PDAPLVIVGEGP-----LEAELEALAAALGLLDRVRFLGRLDDEEKAALLA 262 (357)
T ss_pred ccccccCHHHHHHHHHhc-----------cCcEEEEEeCCh-----hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHH
Confidence 999999999999999876 378999999886 667888888888888999999997 56899999
Q ss_pred hccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeec-CCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHH
Q 023290 170 AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN-GTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMG 248 (284)
Q Consensus 170 ~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~-~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~ 248 (284)
.||++++||....|++|++++|||++|+|||+++.++..+.+.+ +.+|++++++| +++++++|.+++++++.+++++
T Consensus 263 ~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d--~~~~~~~i~~l~~~~~~~~~~~ 340 (357)
T cd03795 263 ACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGD--PAALAEAIRRLLEDPELRERLG 340 (357)
T ss_pred hCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCC--HHHHHHHHHHHHHCHHHHHHHH
Confidence 99999999863369999999999999999999999999998876 89999999988 9999999999999999999999
Q ss_pred HHHHHHHHHhcCHHHHH
Q 023290 249 KRGYERVKEIFQEHHMA 265 (284)
Q Consensus 249 ~~~~~~~~~~~~~~~~~ 265 (284)
+++++.+.++|+|+.++
T Consensus 341 ~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 341 EAARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHHHhcchHhhC
Confidence 99999999999999763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-30 Score=218.87 Aligned_cols=234 Identities=30% Similarity=0.397 Sum_probs=201.7
Q ss_pred ccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEe
Q 023290 11 VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII 90 (284)
Q Consensus 11 ~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~ 90 (284)
...++.+|.+++.|....+.+.+. ++....++.++|||++...+.... ...+.......+.+.++++
T Consensus 139 ~~~~~~~d~~i~~s~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~ 205 (374)
T cd03801 139 RRALRRADRIIAVSEATREELREL----GGVPPEKITVIPNGVDTERFRPAP---------RAARRRLGIPEDEPVILFV 205 (374)
T ss_pred HHHHHhCCEEEEecHHHHHHHHhc----CCCCCCcEEEecCcccccccCccc---------hHHHhhcCCcCCCeEEEEe
Confidence 345678899999999888875553 444446899999999988765432 1123334445677899999
Q ss_pred ccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHH
Q 023290 91 NSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYL 168 (284)
Q Consensus 91 g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~ 168 (284)
|++.+.||++.+++++..+.+ +.++++|+++|.+. ....+++.+++.+..++|.+.|.+ +++..+|
T Consensus 206 g~~~~~k~~~~~i~~~~~~~~-------~~~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 273 (374)
T cd03801 206 GRLVPRKGVDLLLEALAKLRK-------EYPDVRLVIVGDGP-----LREELEALAAELGLGDRVTFLGFVPDEDLPALY 273 (374)
T ss_pred cchhhhcCHHHHHHHHHHHhh-------hcCCeEEEEEeCcH-----HHHHHHHHHHHhCCCcceEEEeccChhhHHHHH
Confidence 999999999999999998865 23789999999764 677888888888888999999997 8999999
Q ss_pred hhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHH
Q 023290 169 AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMG 248 (284)
Q Consensus 169 ~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~ 248 (284)
+.||++++|+. .+++|++++|||++|+|||+++.++..+++.++.+|+++++.| +++++++|.+++.+++.+.+++
T Consensus 274 ~~~di~i~~~~--~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~--~~~l~~~i~~~~~~~~~~~~~~ 349 (374)
T cd03801 274 AAADVFVLPSL--YEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGD--PEALAEAILRLLDDPELRRRLG 349 (374)
T ss_pred HhcCEEEecch--hccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCC--HHHHHHHHHHHHcChHHHHHHH
Confidence 99999999999 7999999999999999999999999999999899999999988 9999999999999999999999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHH
Q 023290 249 KRGYERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (284)
+++++.+.+.|+|+.+++++.++|+
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 350 EAARERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHhhC
Confidence 9999889999999999999998873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=219.46 Aligned_cols=233 Identities=22% Similarity=0.274 Sum_probs=186.1
Q ss_pred ccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEe
Q 023290 11 VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII 90 (284)
Q Consensus 11 ~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~ 90 (284)
...++.+|.+++.|. +..++.+.. ...+++.++|||++...+..... .++.+...+.++++++
T Consensus 129 ~~~~~~~d~ii~~s~---~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~-----------~~~~~~~~~~~~i~~~ 191 (366)
T cd03822 129 RLLLRRADAVIVMSS---ELLRALLLR---AYPEKIAVIPHGVPDPPAEPPES-----------LKALGGLDGRPVLLTF 191 (366)
T ss_pred HHHHhcCCEEEEeeH---HHHHHHHhh---cCCCcEEEeCCCCcCcccCCchh-----------hHhhcCCCCCeEEEEE
Confidence 345678999999972 222221111 12478999999999876543321 1233345577899999
Q ss_pred ccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEecc-c--cCHHHH
Q 023290 91 NSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK-T--LTVAPY 167 (284)
Q Consensus 91 g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~-~--~~~~~~ 167 (284)
|++.+.||++.+++++..+.+ +.++++|+++|.+............++++++++.++|.++|. . +++..+
T Consensus 192 G~~~~~K~~~~ll~a~~~~~~-------~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~ 264 (366)
T cd03822 192 GLLRPYKGLELLLEALPLLVA-------KHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPEL 264 (366)
T ss_pred eeccCCCCHHHHHHHHHHHHh-------hCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHH
Confidence 999999999999999998866 338999999998764321111111134778889899999987 4 789999
Q ss_pred HhhccEEEEcCCCCcC--ccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHH
Q 023290 168 LAAIDVLVQNSQAWGE--CFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRL 245 (284)
Q Consensus 168 ~~~ad~~~~ps~~~~e--~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~ 245 (284)
|+.||++++||. .| ++|++++|||++|+|||+++.++ .+.+.++.+|++++++| +++++++|..++++++.+.
T Consensus 265 ~~~ad~~v~ps~--~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d--~~~~~~~l~~l~~~~~~~~ 339 (366)
T cd03822 265 FSAADVVVLPYR--SADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGD--PAALAEAIRRLLADPELAQ 339 (366)
T ss_pred HhhcCEEEeccc--ccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCC--HHHHHHHHHHHHcChHHHH
Confidence 999999999999 88 99999999999999999999999 67777888999999998 9999999999999999999
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 023290 246 TMGKRGYERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (284)
++++++++.+.+ |+|+.+++++.++|+
T Consensus 340 ~~~~~~~~~~~~-~s~~~~~~~~~~~~~ 366 (366)
T cd03822 340 ALRARAREYARA-MSWERVAERYLRLLA 366 (366)
T ss_pred HHHHHHHHHHhh-CCHHHHHHHHHHHhC
Confidence 999999999887 999999999999873
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.8e-31 Score=225.81 Aligned_cols=228 Identities=21% Similarity=0.207 Sum_probs=180.0
Q ss_pred ccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEe
Q 023290 11 VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII 90 (284)
Q Consensus 11 ~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~ 90 (284)
....+.+|.++++|..+.+.+.+. ++. ..++.+|+||+|.+.+...+. ...++.++|+++
T Consensus 184 ~~~~~~aD~ii~~S~~~~~~~~~~----~~~-~~~~~vi~~gvd~~~~~~~~~---------------~~~~~~~~il~v 243 (419)
T cd03806 184 GLAGSFADVVMVNSTWTRNHIRSL----WKR-NTKPSIVYPPCDVEELLKLPL---------------DEKTRENQILSI 243 (419)
T ss_pred HHHhhcCCEEEECCHHHHHHHHHH----hCc-CCCcEEEcCCCCHHHhccccc---------------ccccCCcEEEEE
Confidence 345789999999999998886553 332 247999999999876543221 012356789999
Q ss_pred ccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCC-ChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHH
Q 023290 91 NSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA-QTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPY 167 (284)
Q Consensus 91 g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~-~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~ 167 (284)
|++.+.||++.+++|+..+.+..++. ..++++|+|+|++... +.++.+.++++++++++.++|.|+|.. +++..+
T Consensus 244 gr~~~~K~~~~li~A~~~l~~~~~~~--~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~~ 321 (419)
T cd03806 244 AQFRPEKNHPLQLRAFAKLLKRLPEE--IKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLEE 321 (419)
T ss_pred EeecCCCCHHHHHHHHHHHHHhCccc--ccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHHH
Confidence 99999999999999999987643210 0136999999986432 234678899999999999999999985 789999
Q ss_pred HhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCc-ceeee---cCCceeeecCCCCChHHHHHHHHHHhhCHHH
Q 023290 168 LAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGT-TEIVV---NGTTGLLHPVGKEGITPLAKNIVKLATHVER 243 (284)
Q Consensus 168 ~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~-~e~v~---~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~ 243 (284)
|+.||++++|+. .|+||++++|||+||+|||+++.++. .+++. ++.+|++++ | +++++++|.+++++++.
T Consensus 322 l~~adv~v~~s~--~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d--~~~la~ai~~ll~~~~~ 395 (419)
T cd03806 322 LSTASIGLHTMW--NEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--T--AEEYAEAIEKILSLSEE 395 (419)
T ss_pred HHhCeEEEECCc--cCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--C--HHHHHHHHHHHHhCCHH
Confidence 999999999998 89999999999999999999998764 57887 789999974 5 99999999999996554
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHH
Q 023290 244 RLTMGKRGYERVKEIFQEHHMAE 266 (284)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~ 266 (284)
...+..++++.+.++|+++.+.+
T Consensus 396 ~~~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 396 ERLRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred HHHHHHHHHHHHHHhhCHHHhcc
Confidence 44434555556778899998754
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-30 Score=218.21 Aligned_cols=220 Identities=17% Similarity=0.259 Sum_probs=179.9
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecc
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 92 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~ 92 (284)
.++.+|.++++|+...+.+++. +|.. . .+||||+|...+... ...++.++++++. .++++|+
T Consensus 140 ~~~~ad~ii~~s~~~~~~~~~~----~~~~--~-~~i~ngv~~~~~~~~----------~~~~~~~~~~~~~-~i~~~G~ 201 (363)
T cd04955 140 AVKFADRLIADSPGIKEYLKEK----YGRD--S-TYIPYGADHVVSSEE----------DEILKKYGLEPGR-YYLLVGR 201 (363)
T ss_pred HHhhccEEEeCCHHHHHHHHHh----cCCC--C-eeeCCCcChhhcchh----------hhhHHhcCCCCCc-EEEEEec
Confidence 3567899999999998886543 4443 2 899999998765430 2234556665444 5679999
Q ss_pred ccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHH-HcCCCCcEEEeccc--cCHHHHHh
Q 023290 93 VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVM-QKKIQDRVHFVNKT--LTVAPYLA 169 (284)
Q Consensus 93 ~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~-~~~~~~~v~~~~~~--~~~~~~~~ 169 (284)
+.+.||++.+++++.++. .+++|+++|+++.. ..+.+.++ .++..++|.++|++ +++..+|+
T Consensus 202 ~~~~Kg~~~li~a~~~l~----------~~~~l~ivG~~~~~-----~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~ 266 (363)
T cd04955 202 IVPENNIDDLIEAFSKSN----------SGKKLVIVGNADHN-----TPYGKLLKEKAAADPRIIFVGPIYDQELLELLR 266 (363)
T ss_pred ccccCCHHHHHHHHHhhc----------cCceEEEEcCCCCc-----chHHHHHHHHhCCCCcEEEccccChHHHHHHHH
Confidence 999999999999998762 47899999997522 22333333 56777899999986 67889999
Q ss_pred hccEEEEcCCCCc-CccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHH
Q 023290 170 AIDVLVQNSQAWG-ECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMG 248 (284)
Q Consensus 170 ~ad~~~~ps~~~~-e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~ 248 (284)
.||++++||. . |++|++++|||+||+|||+++.++..|++.+ +|.++++++ . ++++|.+++++++.+.+++
T Consensus 267 ~ad~~v~ps~--~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~--~--l~~~i~~l~~~~~~~~~~~ 338 (363)
T cd04955 267 YAALFYLHGH--SVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGD--D--LASLLEELEADPEEVSAMA 338 (363)
T ss_pred hCCEEEeCCc--cCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCch--H--HHHHHHHHHhCHHHHHHHH
Confidence 9999999998 6 9999999999999999999999999999965 788888765 3 9999999999999999999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHH
Q 023290 249 KRGYERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (284)
+++++.+.++|||+.+++++.++|+
T Consensus 339 ~~~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 339 KAARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999989999999999999874
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=216.04 Aligned_cols=225 Identities=23% Similarity=0.263 Sum_probs=187.7
Q ss_pred CcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccccc
Q 023290 16 LVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSR 95 (284)
Q Consensus 16 ~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~~ 95 (284)
..+.+++.|....+.+.+ .+..+..++.++|||++.+.+.+.. +...++.++++++..++++.|+...
T Consensus 135 ~~~~~v~~s~~~~~~~~~----~~~~~~~~~~vi~ngi~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~ 202 (365)
T cd03825 135 LNLTIVAPSRWLADCARS----SSLFKGIPIEVIPNGIDTTIFRPRD--------KREARKRLGLPADKKIILFGAVGGT 202 (365)
T ss_pred CCcEEEehhHHHHHHHHh----ccccCCCceEEeCCCCcccccCCCc--------HHHHHHHhCCCCCCeEEEEEecCCC
Confidence 455677888777766443 3446678999999999988775433 2456778888888777777776655
Q ss_pred --cccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEecccc---CHHHHHhh
Q 023290 96 --GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL---TVAPYLAA 170 (284)
Q Consensus 96 --~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~---~~~~~~~~ 170 (284)
.||++.+++++..+.+. ..++++++++|.+... .. .+...+|.++|+.. ++..+|+.
T Consensus 203 ~~~K~~~~ll~a~~~l~~~------~~~~~~~~i~G~~~~~-----~~-------~~~~~~v~~~g~~~~~~~~~~~~~~ 264 (365)
T cd03825 203 DPRKGFDELIEALKRLAER------WKDDIELVVFGASDPE-----IP-------PDLPFPVHYLGSLNDDESLALIYSA 264 (365)
T ss_pred ccccCHHHHHHHHHHhhhc------cCCCeEEEEeCCCchh-----hh-------ccCCCceEecCCcCCHHHHHHHHHh
Confidence 89999999999887542 1278999999987521 11 14456899999874 68899999
Q ss_pred ccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHH
Q 023290 171 IDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKR 250 (284)
Q Consensus 171 ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~ 250 (284)
||++++||. .|++|++++|||++|+|||+++.++..+++.++.+|++++..| +++++++|.+++.+++.+.+++++
T Consensus 265 ad~~l~ps~--~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~--~~~~~~~l~~l~~~~~~~~~~~~~ 340 (365)
T cd03825 265 ADVFVVPSL--QENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGD--PEDLAEGIEWLLADPDEREELGEA 340 (365)
T ss_pred CCEEEeccc--cccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHH
Confidence 999999999 8999999999999999999999999999999988999999988 999999999999999999999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHH
Q 023290 251 GYERVKEIFQEHHMAERIAVVLKE 274 (284)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~ 274 (284)
+++.+.++|||+.+++++.++|++
T Consensus 341 ~~~~~~~~~s~~~~~~~~~~~y~~ 364 (365)
T cd03825 341 ARELAENEFDSRVQAKRYLSLYEE 364 (365)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHhh
Confidence 999999999999999999999976
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=215.51 Aligned_cols=228 Identities=24% Similarity=0.383 Sum_probs=193.5
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEec
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g 91 (284)
..++.+|.+++.|....+++.. ++. ..++.++|||+|...+..... ...++.++..++.++++++|
T Consensus 144 ~~~~~~d~i~~~s~~~~~~~~~-----~~~-~~~~~vi~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~G 209 (374)
T cd03817 144 RFYNRCDAVIAPSEKIADLLRE-----YGV-KRPIEVIPTGIDLDRFEPVDG--------DDERRKLGIPEDEPVLLYVG 209 (374)
T ss_pred HHhhhCCEEEeccHHHHHHHHh-----cCC-CCceEEcCCccchhccCccch--------hHHHHhcCCCCCCeEEEEEe
Confidence 4457899999999988777554 333 345899999999887665432 22366677777889999999
Q ss_pred cccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHh
Q 023290 92 SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLA 169 (284)
Q Consensus 92 ~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~ 169 (284)
++.+.||++.+++++..+... .++++++++|++. ..+.+++.++++++.++|.++|.+ +++..+|+
T Consensus 210 ~~~~~k~~~~l~~~~~~~~~~-------~~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 277 (374)
T cd03817 210 RLAKEKNIDFLIRAFARLLKE-------EPDVKLVIVGDGP-----EREELEELARELGLADRVIFTGFVPREELPDYYK 277 (374)
T ss_pred eeecccCHHHHHHHHHHHHHh-------CCCeEEEEEeCCc-----hHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHH
Confidence 999999999999999987652 3789999999876 667888888888988999999987 78999999
Q ss_pred hccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHH
Q 023290 170 AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGK 249 (284)
Q Consensus 170 ~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~ 249 (284)
.||++++|+. .|++|++++|||+||+|||+++.++..+++.++.+|+++++.+ . +++++|.+++++++.++++++
T Consensus 278 ~ad~~l~~s~--~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~--~-~~~~~i~~l~~~~~~~~~~~~ 352 (374)
T cd03817 278 AADLFVFAST--TETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGD--E-ALAEALLRLLQDPELRRRLSK 352 (374)
T ss_pred HcCEEEeccc--ccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCC--H-HHHHHHHHHHhChHHHHHHHH
Confidence 9999999998 8999999999999999999999999999999999999999876 5 999999999999999999999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHH
Q 023290 250 RGYERVKEIFQEHHMAERIAVVLKE 274 (284)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (284)
++++.+.+.+ +.+++.++|++
T Consensus 353 ~~~~~~~~~~----~~~~~~~~~~~ 373 (374)
T cd03817 353 NAEESAEKFS----FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHHHH----HHHHHHHHHhc
Confidence 9999887644 56666666654
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=213.78 Aligned_cols=217 Identities=22% Similarity=0.288 Sum_probs=184.6
Q ss_pred ccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEe
Q 023290 11 VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII 90 (284)
Q Consensus 11 ~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~ 90 (284)
...++.+|.+++.|...... ....+..++.++|||++...+... ...+...++++
T Consensus 130 ~~~~~~~d~ii~~s~~~~~~-------~~~~~~~~~~vi~~~~~~~~~~~~------------------~~~~~~~i~~~ 184 (348)
T cd03820 130 RLLYRRADAVVVLTEEDRAL-------YYKKFNKNVVVIPNPLPFPPEEPS------------------SDLKSKRILAV 184 (348)
T ss_pred HHHHhcCCEEEEeCHHHHHH-------hhccCCCCeEEecCCcChhhcccc------------------CCCCCcEEEEE
Confidence 34477899999999988611 123567789999999988765432 12456788999
Q ss_pred ccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhh
Q 023290 91 NSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA 170 (284)
Q Consensus 91 g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 170 (284)
|++.+.||++.+++++..+.+ ..++++|+++|.+. ....+.+.+++.++.++|.+.|..+++..+|+.
T Consensus 185 g~~~~~K~~~~l~~~~~~l~~-------~~~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 252 (348)
T cd03820 185 GRLVPQKGFDLLIEAWAKIAK-------KHPDWKLRIVGDGP-----EREALEALIKELGLEDRVILLGFTKNIEEYYAK 252 (348)
T ss_pred EeeccccCHHHHHHHHHHHHh-------cCCCeEEEEEeCCC-----CHHHHHHHHHHcCCCCeEEEcCCcchHHHHHHh
Confidence 999999999999999998865 33899999999876 456777788889998999999998999999999
Q ss_pred ccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC-CcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHH
Q 023290 171 IDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG-GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGK 249 (284)
Q Consensus 171 ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~-~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~ 249 (284)
||+++.||. .|++|++++|||++|+|||+++.+ +..+++.++.+|+++++.| +++++++|.++++|++.++++++
T Consensus 253 ad~~i~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~i~~ll~~~~~~~~~~~ 328 (348)
T cd03820 253 ASIFVLTSR--FEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGD--VEALAEALLRLMEDEELRKRMGA 328 (348)
T ss_pred CCEEEeCcc--ccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCC--HHHHHHHHHHHHcCHHHHHHHHH
Confidence 999999999 899999999999999999999875 4566777777999999988 99999999999999999999999
Q ss_pred HHHHHHHHhcCHHHHHHHHH
Q 023290 250 RGYERVKEIFQEHHMAERIA 269 (284)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~ 269 (284)
++++.+ +.|+|+.+++++.
T Consensus 329 ~~~~~~-~~~~~~~~~~~~~ 347 (348)
T cd03820 329 NARESA-ERFSIENIIKQWE 347 (348)
T ss_pred HHHHHH-HHhCHHHHHHHhc
Confidence 997655 6799999998875
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=214.76 Aligned_cols=223 Identities=24% Similarity=0.327 Sum_probs=186.9
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhccc-CCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEe
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIK-MPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII 90 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~-~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~ 90 (284)
..++.+|.+++.|....+.+.+. ...+ ..++.+++++++...+...... ..++.+.++++
T Consensus 134 ~~~~~~d~ii~~s~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~i~~~ 194 (359)
T cd03808 134 LALRFTDKVIFQNEDDRDLALKL----GIIKKKKTVLIPGSGVDLDRFSPSPEP---------------IPEDDPVFLFV 194 (359)
T ss_pred HHHhhccEEEEcCHHHHHHHHHh----cCCCcCceEEecCCCCChhhcCccccc---------------cCCCCcEEEEE
Confidence 34567899999999988876553 2222 4567778889888766543210 13467899999
Q ss_pred ccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHH-HHHHcCCCCcEEEeccccCHHHHHh
Q 023290 91 NSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRN-YVMQKKIQDRVHFVNKTLTVAPYLA 169 (284)
Q Consensus 91 g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~-~~~~~~~~~~v~~~~~~~~~~~~~~ 169 (284)
|++.+.||++.+++++..+.+ ..++++|+++|.+.... .... .+.+.+..++|.++|+.+++..+|+
T Consensus 195 G~~~~~k~~~~li~~~~~l~~-------~~~~~~l~i~G~~~~~~-----~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 262 (359)
T cd03808 195 ARLLKDKGIDELLEAARILKA-------KGPNVRLLLVGDGDEEN-----PAAILEIEKLGLEGRVEFLGFRDDVPELLA 262 (359)
T ss_pred eccccccCHHHHHHHHHHHHh-------cCCCeEEEEEcCCCcch-----hhHHHHHHhcCCcceEEEeeccccHHHHHH
Confidence 999999999999999988765 34899999999976432 2222 3566677789999999999999999
Q ss_pred hccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHH
Q 023290 170 AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGK 249 (284)
Q Consensus 170 ~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~ 249 (284)
.||++++||. .|++|++++|||++|+|||+++.++..+++.++.+|++++++| +++++++|.+++.+++.+.++++
T Consensus 263 ~adi~i~ps~--~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~--~~~~~~~i~~l~~~~~~~~~~~~ 338 (359)
T cd03808 263 AADVFVLPSY--REGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLVPPGD--AEALADAIERLIEDPELRARMGQ 338 (359)
T ss_pred hccEEEecCc--ccCcchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEECCCC--HHHHHHHHHHHHhCHHHHHHHHH
Confidence 9999999999 7999999999999999999999999999999899999999988 99999999999999999999999
Q ss_pred HHHHHHHHhcCHHHHHHHHH
Q 023290 250 RGYERVKEIFQEHHMAERIA 269 (284)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~ 269 (284)
++++.+.++|+|+.+++++.
T Consensus 339 ~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 339 AARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHHhcCHHHHHHHhh
Confidence 99999999999999998875
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=215.75 Aligned_cols=223 Identities=24% Similarity=0.305 Sum_probs=186.5
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEec
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g 91 (284)
...+.+|.+++.|....+.+.+ ....++.+++||+|.+.+.+.... ...+.+++ .++.++++++|
T Consensus 140 ~~~~~~d~i~~~s~~~~~~~~~-------~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~-~~~~~~i~~~G 204 (364)
T cd03814 140 WFHNRADRVLVPSPSLADELRA-------RGFRRVRLWPRGVDTELFHPRRRD-------EALRARLG-PPDRPVLLYVG 204 (364)
T ss_pred HHHHhCCEEEeCCHHHHHHHhc-------cCCCceeecCCCccccccCccccc-------HHHHHHhC-CCCCeEEEEEe
Confidence 3456789999999988774332 344679999999998877544321 23344555 45678899999
Q ss_pred cccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHh
Q 023290 92 SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLA 169 (284)
Q Consensus 92 ~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~ 169 (284)
++.+.||++.+++++..+.. + ++++|+++|.++ ....++ +..++|.++|+. +++..+|+
T Consensus 205 ~~~~~k~~~~~i~~~~~l~~-------~-~~~~l~i~G~~~-----~~~~~~------~~~~~v~~~g~~~~~~~~~~~~ 265 (364)
T cd03814 205 RLAPEKNLEALLDADLPLRR-------R-PPVRLVIVGDGP-----ARARLE------ARYPNVHFLGFLDGEELAAAYA 265 (364)
T ss_pred ccccccCHHHHHHHHHHhhh-------c-CCceEEEEeCCc-----hHHHHh------ccCCcEEEEeccCHHHHHHHHH
Confidence 99999999999999998864 3 689999999875 333333 345689999964 78999999
Q ss_pred hccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHH
Q 023290 170 AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGK 249 (284)
Q Consensus 170 ~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~ 249 (284)
.||+++.||. .|++|++++|||+||+|||+++.++..+++.++.+|+++++.+ .++++++|.+++.|++.+.++++
T Consensus 266 ~~d~~l~~s~--~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~ 341 (364)
T cd03814 266 SADVFVFPSR--TETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGD--AEAFAAALAALLADPELRRRMAA 341 (364)
T ss_pred hCCEEEECcc--cccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCC--HHHHHHHHHHHHcCHHHHHHHHH
Confidence 9999999998 8999999999999999999999999999999989999999988 99999999999999999999999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHH
Q 023290 250 RGYERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~ 273 (284)
++++.+ ++|+|+.+.+++.++|+
T Consensus 342 ~~~~~~-~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 342 RARAEA-ERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHHH-hhcCHHHHHHHHHHhhC
Confidence 999988 67999999999998873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=215.72 Aligned_cols=232 Identities=30% Similarity=0.438 Sum_probs=200.0
Q ss_pred ccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEe
Q 023290 11 VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII 90 (284)
Q Consensus 11 ~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~ 90 (284)
...++.+|.+++.|....+.+.+. +.+..++.+++||+|...+...... .. ...+...+.+.++++
T Consensus 143 ~~~~~~~d~ii~~s~~~~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~~i~~~ 208 (377)
T cd03798 143 RRALRRADAVIAVSEALADELKAL-----GIDPEKVTVIPNGVDTERFSPADRA-------EA--RKLGLPEDKKVILFV 208 (377)
T ss_pred HHHHhcCCeEEeCCHHHHHHHHHh-----cCCCCceEEcCCCcCcccCCCcchH-------HH--HhccCCCCceEEEEe
Confidence 355678999999999988876552 2577899999999998877654321 11 344555678899999
Q ss_pred ccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHH
Q 023290 91 NSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYL 168 (284)
Q Consensus 91 g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~ 168 (284)
|++.+.||++.+++++..+.+ ++++++++++|.+. ....+++.+++.+..++|.+.|+. +++..+|
T Consensus 209 g~~~~~k~~~~li~~~~~~~~-------~~~~~~l~i~g~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 276 (377)
T cd03798 209 GRLVPRKGIDYLIEALARLLK-------KRPDVHLVIVGDGP-----LREALEALAAELGLEDRVTFLGAVPHEEVPAYY 276 (377)
T ss_pred ccCccccCHHHHHHHHHHHHh-------cCCCeEEEEEcCCc-----chHHHHHHHHhcCCcceEEEeCCCCHHHHHHHH
Confidence 999999999999999998865 33789999999875 456777888888888899999987 6799999
Q ss_pred hhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHH
Q 023290 169 AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMG 248 (284)
Q Consensus 169 ~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~ 248 (284)
+.||++++|+. .+++|++++|||++|+|||+++.++..+++.++.+|+++++.| +++++++|.+++++++. ++.
T Consensus 277 ~~ad~~i~~~~--~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~--~~~l~~~i~~~~~~~~~--~~~ 350 (377)
T cd03798 277 AAADVFVLPSL--REGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGD--PEALAEAILRLLADPWL--RLG 350 (377)
T ss_pred HhcCeeecchh--hccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCC--HHHHHHHHHHHhcCcHH--HHh
Confidence 99999999999 8999999999999999999999999999999999999999998 99999999999999876 788
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHH
Q 023290 249 KRGYERVKEIFQEHHMAERIAVVLKE 274 (284)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (284)
.++++.+.+.|+|+.+++++.++|++
T Consensus 351 ~~~~~~~~~~~s~~~~~~~~~~~~~~ 376 (377)
T cd03798 351 RAARRRVAERFSWENVAERLLELYRE 376 (377)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhh
Confidence 88889999999999999999999875
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-30 Score=217.04 Aligned_cols=229 Identities=21% Similarity=0.192 Sum_probs=189.0
Q ss_pred cccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEE
Q 023290 10 YVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 89 (284)
Q Consensus 10 ~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~ 89 (284)
....++.+|.+++.|+...+.+.+ .++.+..++.++|||++...+...... . +.......+++++++
T Consensus 134 ~~~~~~~~d~~i~~s~~~~~~~~~----~~~~~~~~~~vi~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~~i~~ 200 (365)
T cd03809 134 LRRALRRADAIITVSEATKRDLLR----YLGVPPDKIVVIPLGVDPRFRPPPAEA-------E--VLRALYLLPRPYFLY 200 (365)
T ss_pred HHHHHHHcCEEEEccHHHHHHHHH----HhCcCHHHEEeeccccCccccCCCchH-------H--HHHHhcCCCCCeEEE
Confidence 345567889999999988887554 356667789999999998877654321 1 334444567788999
Q ss_pred eccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHH
Q 023290 90 INSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPY 167 (284)
Q Consensus 90 ~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~ 167 (284)
+|++.+.||++.+++++..+.. ..++++|+++|.+.... .......++.+..++|.++|.. +++..+
T Consensus 201 ~G~~~~~K~~~~~l~~~~~~~~-------~~~~~~l~i~G~~~~~~----~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 269 (365)
T cd03809 201 VGTIEPRKNLERLLEAFARLPA-------KGPDPKLVIVGKRGWLN----EELLARLRELGLGDRVRFLGYVSDEELAAL 269 (365)
T ss_pred eCCCccccCHHHHHHHHHHHHH-------hcCCCCEEEecCCcccc----HHHHHHHHHcCCCCeEEECCCCChhHHHHH
Confidence 9999999999999999998866 22578999999865432 2233333667888899999997 789999
Q ss_pred HhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHH
Q 023290 168 LAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTM 247 (284)
Q Consensus 168 ~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~ 247 (284)
|+.||++++||. .|++|++++|||++|+|||+++.+++.+++. .+|+++++.| +++++++|.+++.|++.+.++
T Consensus 270 ~~~~d~~l~ps~--~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~--~~~~~~~i~~l~~~~~~~~~~ 343 (365)
T cd03809 270 YRGARAFVFPSL--YEGFGLPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLD--PEALAAAIERLLEDPALREEL 343 (365)
T ss_pred Hhhhhhhcccch--hccCCCCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCC--HHHHHHHHHHHhcCHHHHHHH
Confidence 999999999998 8999999999999999999999999999984 4688999888 999999999999999999999
Q ss_pred HHHHHHHHHHhcCHHHHHHHHH
Q 023290 248 GKRGYERVKEIFQEHHMAERIA 269 (284)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~ 269 (284)
++++++.+ +.|+|+.+++++.
T Consensus 344 ~~~~~~~~-~~~sw~~~~~~~~ 364 (365)
T cd03809 344 RERGLARA-KRFSWEKTARRTL 364 (365)
T ss_pred HHHHHHHH-HhCCHHHHHHHHh
Confidence 99999655 5799999998875
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=212.13 Aligned_cols=220 Identities=27% Similarity=0.346 Sum_probs=188.6
Q ss_pred ccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEe
Q 023290 11 VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII 90 (284)
Q Consensus 11 ~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~ 90 (284)
...++.+|.+++.|....+++.+. ++.+..++.++|||++...+...... . . .++..+++++++++
T Consensus 130 ~~~~~~~d~ii~~s~~~~~~~~~~----~~~~~~~~~vi~~~~~~~~~~~~~~~-------~-~--~~~~~~~~~~i~~~ 195 (353)
T cd03811 130 RKLYRRADKIVAVSEGVKEDLLKL----LGIPPDKIEVIYNPIDIEEIRALAEE-------P-L--ELGIPPDGPVILAV 195 (353)
T ss_pred HhhccccceEEEeccchhhhHHHh----hcCCccccEEecCCcChhhcCcccch-------h-h--hcCCCCCceEEEEE
Confidence 456688999999999998885554 55556889999999998876544321 0 0 34456678899999
Q ss_pred ccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhh
Q 023290 91 NSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA 170 (284)
Q Consensus 91 g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 170 (284)
|++.+.||++.+++++..+.+ ..++++|+++|.+. ....+++.+++++..++|.+.|..+++.++|+.
T Consensus 196 g~~~~~k~~~~~i~~~~~l~~-------~~~~~~l~i~G~~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 263 (353)
T cd03811 196 GRLSPQKGFDTLIRAFALLRK-------EGPDARLVILGDGP-----LREELEALAKELGLADRVHFLGFQSNPYPYLKA 263 (353)
T ss_pred ecchhhcChHHHHHHHHHhhh-------cCCCceEEEEcCCc-----cHHHHHHHHHhcCCCccEEEecccCCHHHHHHh
Confidence 999999999999999998865 23789999999876 556777888999998999999999999999999
Q ss_pred ccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHH---HHHHHHHhhCHHHHHHH
Q 023290 171 IDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPL---AKNIVKLATHVERRLTM 247 (284)
Q Consensus 171 ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~---~~~i~~l~~~~~~~~~~ 247 (284)
||++++||. .|++|++++|||++|+|||+++.++..+++.++.+|+++++.+ ++++ ++++..+..+++.+.++
T Consensus 264 ~d~~i~ps~--~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~ 339 (353)
T cd03811 264 ADLFVLSSR--YEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGD--EAALAAAALALLDLLLDPELRERL 339 (353)
T ss_pred CCEEEeCcc--cCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCC--HHHHHHHHHHHHhccCChHHHHHH
Confidence 999999999 8999999999999999999999999999999999999999988 8888 78888888899999999
Q ss_pred HHHHHHHHHHhcC
Q 023290 248 GKRGYERVKEIFQ 260 (284)
Q Consensus 248 ~~~~~~~~~~~~~ 260 (284)
+.++++.+.++|+
T Consensus 340 ~~~~~~~~~~~~~ 352 (353)
T cd03811 340 AAAARERVAREYS 352 (353)
T ss_pred HHHHHHHHHHHhc
Confidence 9988888888776
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-29 Score=206.69 Aligned_cols=225 Identities=20% Similarity=0.224 Sum_probs=166.6
Q ss_pred ccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCC-CCCeEEEE
Q 023290 11 VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVR-NEDLLFAI 89 (284)
Q Consensus 11 ~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~i~~ 89 (284)
.+.+..-+.+|++|+.+++.+.+ .|++.+ + +|++|+|.+.+.+.... ...++++++.. ++.+++++
T Consensus 87 ~~~m~~~~~vIavS~~t~~~L~~-----~G~~~~-i-~I~~GVD~~~f~p~~~~------~~~~r~~~~~~~~~~~~i~~ 153 (335)
T PHA01633 87 NKYLLQDVKFIPNSKFSAENLQE-----VGLQVD-L-PVFHGINFKIVENAEKL------VPQLKQKLDKDFPDTIKFGI 153 (335)
T ss_pred HHHHhcCCEEEeCCHHHHHHHHH-----hCCCCc-e-eeeCCCChhhcCccchh------hHHHHHHhCcCCCCCeEEEE
Confidence 34445566889999999887553 466544 3 47889998877653311 23456666643 46778899
Q ss_pred eccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEec---cc--cCH
Q 023290 90 INSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN---KT--LTV 164 (284)
Q Consensus 90 ~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~---~~--~~~ 164 (284)
+||+.++||++.+++|+..+.+..++. ..+++++++|.+ ..+++++.++|.|+| .. +++
T Consensus 154 vGRl~~~KG~~~LI~A~~~L~~~~p~~---~~~i~l~ivG~~-------------~~~~l~l~~~V~f~g~~G~~~~~dl 217 (335)
T PHA01633 154 VSGLTKRKNMDLMLQVFNELNTKYPDI---AKKIHFFVISHK-------------QFTQLEVPANVHFVAEFGHNSREYI 217 (335)
T ss_pred EeCCccccCHHHHHHHHHHHHHhCCCc---cccEEEEEEcHH-------------HHHHcCCCCcEEEEecCCCCCHHHH
Confidence 999999999999999999987632110 024678877741 234567788999985 32 679
Q ss_pred HHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeec------------------CCceeeecCCCCC
Q 023290 165 APYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN------------------GTTGLLHPVGKEG 226 (284)
Q Consensus 165 ~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~------------------~~~g~~~~~~d~~ 226 (284)
..+|+.||++++||. .||||++++|||+||+|||+++.+++.|++.+ ...|+.++..|
T Consensus 218 ~~~y~~aDifV~PS~--~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d-- 293 (335)
T PHA01633 218 FAFYGAMDFTIVPSG--TEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQ-- 293 (335)
T ss_pred HHHHHhCCEEEECCc--cccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCC--
Confidence 999999999999999 89999999999999999999999998887542 22366777777
Q ss_pred hHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 023290 227 ITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAV 270 (284)
Q Consensus 227 ~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (284)
+++++++|..+++..+ +...+.++++.++ .|+|+.+.+++++
T Consensus 294 ~~~la~ai~~~~~~~~-~~~~~~~~~~~a~-~f~~~~~~~~~~~ 335 (335)
T PHA01633 294 IEDMANAIILAFELQD-REERSMKLKELAK-KYDIRNLYTRFLE 335 (335)
T ss_pred HHHHHHHHHHHHhccC-hhhhhHHHHHHHH-hcCHHHHHHHhhC
Confidence 9999999999965322 2233566776664 6999999998863
|
|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-29 Score=215.21 Aligned_cols=233 Identities=13% Similarity=0.101 Sum_probs=177.4
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHH-------------HhC
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRE-------------SLG 79 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~-------------~~~ 79 (284)
..+.+|.++++|+.+.+++.+ ++.+.+++.||+||.+ ..+.+.+.... ....++ ..+
T Consensus 157 ~~~~ad~ii~vS~~~~~~l~~-----~~~~~~ki~vI~Ng~~-~~f~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 226 (415)
T cd03816 157 FGRLADYNLCVTKAMKEDLQQ-----FNNWKIRATVLYDRPP-EQFRPLPLEEK----HELFLKLAKTFLTRELRIGAVQ 226 (415)
T ss_pred HhhcCCEeeecCHHHHHHHHh-----hhccCCCeeecCCCCH-HHceeCcHHHH----HHHHHhccccccccccccccce
Confidence 346799999999999887543 5678899999999954 33333221110 011111 112
Q ss_pred C-CCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEe
Q 023290 80 V-RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFV 158 (284)
Q Consensus 80 ~-~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~ 158 (284)
+ +++..+++++|++.+.||++.+++|+..+.+..... ..+++++|+|+|+|+ ..+.++++++++++.+.+.+.
T Consensus 227 ~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~-~~~~~i~l~ivG~G~-----~~~~l~~~~~~~~l~~~~~~~ 300 (415)
T cd03816 227 LSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAATG-PKLPKLLCIITGKGP-----LKEKYLERIKELKLKKVTIRT 300 (415)
T ss_pred ecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhccc-ccCCCEEEEEEecCc-----cHHHHHHHHHHcCCCcEEEEc
Confidence 2 234567778999999999999999999886532110 023689999999986 678899999999987544455
Q ss_pred ccc--cCHHHHHhhccEEEEcCCC-CcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHH
Q 023290 159 NKT--LTVAPYLAAIDVLVQNSQA-WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIV 235 (284)
Q Consensus 159 ~~~--~~~~~~~~~ad~~~~ps~~-~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~ 235 (284)
|+. +++..+|+.||+++.++.. ..+++|++++||||||+|||+++.++..|+++++.+|++++ | +++++++|.
T Consensus 301 g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d--~~~la~~i~ 376 (415)
T cd03816 301 PWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--D--SEELAEQLI 376 (415)
T ss_pred CcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--C--HHHHHHHHH
Confidence 654 8999999999999875331 15789999999999999999999999999999999999984 5 999999999
Q ss_pred HHhhC---HHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 023290 236 KLATH---VERRLTMGKRGYERVKEIFQEHHMAER 267 (284)
Q Consensus 236 ~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (284)
.+++| ++.+++|++++++..+ ++|+....+
T Consensus 377 ~ll~~~~~~~~~~~m~~~~~~~~~--~~~~~~~~~ 409 (415)
T cd03816 377 DLLSNFPNRGKLNSLKKGAQEESE--LRWDENWDR 409 (415)
T ss_pred HHHhcCCCHHHHHHHHHHHHHhhh--cCHHHHHHH
Confidence 99999 9999999999998774 566554444
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-28 Score=213.07 Aligned_cols=209 Identities=12% Similarity=0.094 Sum_probs=165.3
Q ss_pred cccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecccccc
Q 023290 17 VAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRG 96 (284)
Q Consensus 17 ~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~~~ 96 (284)
++.+++.|..+.+. +...+..+ ||+|.++|.+... ...++++++......++|+||+.+.
T Consensus 499 cD~VIaPS~atq~L-----------~~~vI~nV-nGVDte~F~P~~r--------~~~~r~lgi~~~~kgiLfVGRLa~E 558 (794)
T PLN02501 499 CHKVLRLSAATQDL-----------PKSVICNV-HGVNPKFLKIGEK--------VAEERELGQQAFSKGAYFLGKMVWA 558 (794)
T ss_pred CCEEEcCCHHHHHh-----------cccceeec-ccccccccCCcch--------hHHHHhcCCccccCceEEEEccccc
Confidence 78899988665531 22222222 6999998886543 2222556665444557899999999
Q ss_pred ccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhccEEEE
Q 023290 97 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQ 176 (284)
Q Consensus 97 k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad~~~~ 176 (284)
||++.+++++..+.. +.++++|+|+|+|+ ..+.+++.++++++ +|.|+|..++...+|+.+|++++
T Consensus 559 KGld~LLeAla~L~~-------~~pnvrLvIVGDGP-----~reeLe~la~eLgL--~V~FLG~~dd~~~lyasaDVFVl 624 (794)
T PLN02501 559 KGYRELIDLLAKHKN-------ELDGFNLDVFGNGE-----DAHEVQRAAKRLDL--NLNFLKGRDHADDSLHGYKVFIN 624 (794)
T ss_pred CCHHHHHHHHHHHHh-------hCCCeEEEEEcCCc-----cHHHHHHHHHHcCC--EEEecCCCCCHHHHHHhCCEEEE
Confidence 999999999988765 23789999999987 67889999998887 58999998888899999999999
Q ss_pred cCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Q 023290 177 NSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVK 256 (284)
Q Consensus 177 ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~ 256 (284)
||. .|+||++++||||||+|||+++.++. +++.++.+|++. +| +++++++|.+++++++.+..+.+ .
T Consensus 625 PS~--sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D--~EafAeAI~~LLsd~~~rl~~~a------~ 691 (794)
T PLN02501 625 PSI--SDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KT--SEDFVAKVKEALANEPQPLTPEQ------R 691 (794)
T ss_pred CCC--cccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CC--HHHHHHHHHHHHhCchhhhHHHH------H
Confidence 999 99999999999999999999999985 446678888765 45 99999999999998775433321 2
Q ss_pred HhcCHHHHHHHHHHHH
Q 023290 257 EIFQEHHMAERIAVVL 272 (284)
Q Consensus 257 ~~~~~~~~~~~~~~~~ 272 (284)
..+||+.+++++++.-
T Consensus 692 ~~~SWeAaadrLle~~ 707 (794)
T PLN02501 692 YNLSWEAATQRFMEYS 707 (794)
T ss_pred hhCCHHHHHHHHHHhh
Confidence 3699999999998754
|
|
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-28 Score=209.60 Aligned_cols=226 Identities=24% Similarity=0.296 Sum_probs=190.7
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEec
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g 91 (284)
..+..+|.+++.|....+++. ..+.+..++.++|||++...+...... .. +.+.....+.+.++++|
T Consensus 161 ~~~~~~d~vi~~s~~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~i~~~G 227 (394)
T cd03794 161 LIYRRADAIVVISPGMREYLV-----RRGVPPEKISVIPNGVDLELFKPPPAD-------ES-LRKELGLDDKFVVLYAG 227 (394)
T ss_pred HHHhcCCEEEEECHHHHHHHH-----hcCCCcCceEEcCCCCCHHHcCCccch-------hh-hhhccCCCCcEEEEEec
Confidence 345788999999999888755 256778899999999998766544321 11 34445556788999999
Q ss_pred cccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHh
Q 023290 92 SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLA 169 (284)
Q Consensus 92 ~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~ 169 (284)
++.+.||++.+++++..+.+ . ++++++++|.+. ..+.+.+.+...+. ++|.++|.. +++..+|+
T Consensus 228 ~~~~~k~~~~l~~~~~~l~~-------~-~~~~l~i~G~~~-----~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~ 293 (394)
T cd03794 228 NIGRAQGLDTLLEAAALLKD-------R-PDIRFLIVGDGP-----EKEELKELAKALGL-DNVTFLGRVPKEELPELLA 293 (394)
T ss_pred CcccccCHHHHHHHHHHHhh-------c-CCeEEEEeCCcc-----cHHHHHHHHHHcCC-CcEEEeCCCChHHHHHHHH
Confidence 99999999999999998765 2 589999999876 45666666666555 579999976 68999999
Q ss_pred hccEEEEcCCCCcCc-----cchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHH
Q 023290 170 AIDVLVQNSQAWGEC-----FGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERR 244 (284)
Q Consensus 170 ~ad~~~~ps~~~~e~-----~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~ 244 (284)
.||++++|+. .++ +|++++|||++|+|||+++.++..+.+.++.+|++++++| +++++++|.+++.|++.+
T Consensus 294 ~~di~i~~~~--~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~--~~~l~~~i~~~~~~~~~~ 369 (394)
T cd03794 294 AADVGLVPLK--PGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGD--PEALAAAILELLDDPEER 369 (394)
T ss_pred hhCeeEEecc--CcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCC--HHHHHHHHHHHHhChHHH
Confidence 9999999998 554 4788999999999999999999999998888999999988 999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHH
Q 023290 245 LTMGKRGYERVKEIFQEHHMAERI 268 (284)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~ 268 (284)
.++++++++.+.++|+|+.+++++
T Consensus 370 ~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 370 AEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred HHHHHHHHHHHHHhhcHHHHHHhc
Confidence 999999999999899999999876
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=202.04 Aligned_cols=237 Identities=21% Similarity=0.207 Sum_probs=194.3
Q ss_pred CCcccccccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCC
Q 023290 4 HYFKLDYVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNE 83 (284)
Q Consensus 4 ~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 83 (284)
.+++......+...|++||+|...++-. .=+-.+.+.++.+|||.++...|.+.+... -+.+
T Consensus 133 i~~n~ll~~sL~~id~~IcVshtskent----vlr~~L~p~kvsvIPnAv~~~~f~P~~~~~--------------~S~~ 194 (426)
T KOG1111|consen 133 ILTNKLLPLSLANIDRIICVSHTSKENT----VLRGALAPAKVSVIPNAVVTHTFTPDAADK--------------PSAD 194 (426)
T ss_pred hhhcceeeeeecCCCcEEEEeecCCCce----EEEeccCHhHeeeccceeeccccccCcccc--------------CCCC
Confidence 4556667778889999999999876542 112347788999999999999988744321 1234
Q ss_pred CeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--
Q 023290 84 DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT-- 161 (284)
Q Consensus 84 ~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~-- 161 (284)
...++.++|+.++||.|.+++++..+++ ++|+++|+|+|+|+ -...+++..+++.+.++|.++|.+
T Consensus 195 i~~ivv~sRLvyrKGiDll~~iIp~vc~-------~~p~vrfii~GDGP-----k~i~lee~lEk~~l~~rV~~lG~v~h 262 (426)
T KOG1111|consen 195 IITIVVASRLVYRKGIDLLLEIIPSVCD-------KHPEVRFIIIGDGP-----KRIDLEEMLEKLFLQDRVVMLGTVPH 262 (426)
T ss_pred eeEEEEEeeeeeccchHHHHHHHHHHHh-------cCCCeeEEEecCCc-----ccchHHHHHHHhhccCceEEecccch
Confidence 4788899999999999999999999987 56999999999998 567788888899999999999987
Q ss_pred cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCH
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHV 241 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~ 241 (284)
+++.+.|..-|+|++||. .|+|+++++|||+||+|||++..||++|++.++ .-++.+++ ++++++++++.+..-
T Consensus 263 ~~Vr~vl~~G~IFlntSl--TEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d-~i~~~~~~---~~dl~~~v~~ai~~~ 336 (426)
T KOG1111|consen 263 DRVRDVLVRGDIFLNTSL--TEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED-MITLGEPG---PDDLVGAVEKAITKL 336 (426)
T ss_pred HHHHHHHhcCcEEeccHH--HHHHHHHHHHHHhCCCEEEEeecCCccccCCcc-ceeccCCC---hHHHHHHHHHHHHHh
Confidence 899999999999999999 999999999999999999999999999999665 33444444 888999888887643
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhh
Q 023290 242 ERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKS 279 (284)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (284)
... -++..+.+.+.|+|+..+++-+++|.++...+
T Consensus 337 ~~~---p~~~h~~v~~~y~w~dVa~rTekvy~r~~~t~ 371 (426)
T KOG1111|consen 337 RTL---PLEFHDRVKKMYSWKDVAERTEKVYDRAATTS 371 (426)
T ss_pred ccC---chhHHHHHHHhccHHHHHHHHHHHHHHHhhcc
Confidence 222 23344567778999999999999999988754
|
|
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=211.20 Aligned_cols=206 Identities=15% Similarity=0.122 Sum_probs=157.2
Q ss_pred CcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccc--
Q 023290 16 LVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSV-- 93 (284)
Q Consensus 16 ~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~-- 93 (284)
.++.+|+.|.+.++.+.+ .+ ...++.+||||+|.+.+.+.+.. ...+ .++++++++++|+.
T Consensus 190 ~~~~iV~~S~~l~~~~~~----~~--~~~~i~vI~NGid~~~~~~~~~~-------~~~~----~~~~~~~il~v~~~~~ 252 (405)
T PRK10125 190 LGCQFISPSQHVADAFNS----LY--GPGRCRIINNGIDMATEAILAEL-------PPVR----ETQGKPKIAVVAHDLR 252 (405)
T ss_pred cCcEEEEcCHHHHHHHHH----Hc--CCCCEEEeCCCcCcccccccccc-------cccc----cCCCCCEEEEEEeccc
Confidence 456788889888876443 23 35689999999997533221110 0000 12456778899984
Q ss_pred cccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc---cCHHHHHhh
Q 023290 94 SRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT---LTVAPYLAA 170 (284)
Q Consensus 94 ~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~---~~~~~~~~~ 170 (284)
.+.||++.+++|+..+. ++++|+++|.+.+.. ..++.++|.. .++.++|+.
T Consensus 253 ~~~Kg~~~li~A~~~l~----------~~~~L~ivG~g~~~~----------------~~~v~~~g~~~~~~~l~~~y~~ 306 (405)
T PRK10125 253 YDGKTDQQLVREMMALG----------DKIELHTFGKFSPFT----------------AGNVVNHGFETDKRKLMSALNQ 306 (405)
T ss_pred cCCccHHHHHHHHHhCC----------CCeEEEEEcCCCccc----------------ccceEEecCcCCHHHHHHHHHh
Confidence 36899999999998751 679999999864210 1357777764 568899999
Q ss_pred ccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHH----
Q 023290 171 IDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLT---- 246 (284)
Q Consensus 171 ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~---- 246 (284)
||++++||. +|+||++++||||||+|||+|+.||++|++.++ +|++++++| ++++++++ +++.+.+
T Consensus 307 aDvfV~pS~--~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv~~~d--~~~La~~~-----~~~~~~~~~~~ 376 (405)
T PRK10125 307 MDALVFSSR--VDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTVSEEE--VLQLAQLS-----KPEIAQAVFGT 376 (405)
T ss_pred CCEEEECCc--cccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEECCCC--HHHHHhcc-----CHHHHHHhhhh
Confidence 999999999 999999999999999999999999999999765 899999999 99999854 3333332
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 023290 247 MGKRGYERVKEIFQEHHMAERIAVVLKE 274 (284)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (284)
+..++++.+.+.|+++.+++++.++|++
T Consensus 377 ~~~~~r~~~~~~fs~~~~~~~y~~lY~~ 404 (405)
T PRK10125 377 TLAEFSQRSRAAYSGQQMLEEYVNFYQN 404 (405)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 2355788888899999999999999975
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=186.25 Aligned_cols=169 Identities=29% Similarity=0.497 Sum_probs=152.3
Q ss_pred HHHHHHHhCCCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcC
Q 023290 71 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKK 150 (284)
Q Consensus 71 ~~~~r~~~~~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~ 150 (284)
++..+.+.+..+++++|+++|++.+.||++.+++++..+..... ++++++|+|.+. +...+...++.++
T Consensus 2 ~~~~~~~~~~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~------~~~~l~i~G~~~-----~~~~~~~~~~~~~ 70 (172)
T PF00534_consen 2 KDKLREKLKIPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKN------PNYKLVIVGDGE-----YKKELKNLIEKLN 70 (172)
T ss_dssp HHHHHHHTTT-TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHH------TTEEEEEESHCC-----HHHHHHHHHHHTT
T ss_pred hHHHHHHcCCCCCCeEEEEEecCccccCHHHHHHHHHHHHhhcC------CCeEEEEEcccc-----ccccccccccccc
Confidence 46788888998999999999999999999999999999875311 899999999654 7788999999999
Q ss_pred CCCcEEEecccc--CHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChH
Q 023290 151 IQDRVHFVNKTL--TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGIT 228 (284)
Q Consensus 151 ~~~~v~~~~~~~--~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~ 228 (284)
+.+++.+++... ++..+|+.||++++||. .|++|.+++|||++|+|||+++.+++.+++.++.+|+++++.+ ++
T Consensus 71 ~~~~i~~~~~~~~~~l~~~~~~~di~v~~s~--~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~--~~ 146 (172)
T PF00534_consen 71 LKENIIFLGYVPDDELDELYKSSDIFVSPSR--NEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPND--IE 146 (172)
T ss_dssp CGTTEEEEESHSHHHHHHHHHHTSEEEE-BS--SBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTS--HH
T ss_pred ccccccccccccccccccccccceecccccc--ccccccccccccccccceeeccccCCceeeccccceEEeCCCC--HH
Confidence 999999999975 99999999999999999 8999999999999999999999999999999999999999998 99
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHH
Q 023290 229 PLAKNIVKLATHVERRLTMGKRGYER 254 (284)
Q Consensus 229 ~~~~~i~~l~~~~~~~~~~~~~~~~~ 254 (284)
+++++|.+++.+++.++.|+++++++
T Consensus 147 ~l~~~i~~~l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 147 ELADAIEKLLNDPELRQKLGKNARER 172 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCHHHHHHHHHHhcCC
Confidence 99999999999999999999999874
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-28 Score=203.63 Aligned_cols=214 Identities=22% Similarity=0.269 Sum_probs=177.3
Q ss_pred CcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccccc
Q 023290 16 LVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSR 95 (284)
Q Consensus 16 ~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~~ 95 (284)
..|.+++.|....+.+.+ .+....++.+++||+|...+..... +.+.++++++++|++.+
T Consensus 143 ~~d~ii~~s~~~~~~~~~-----~~~~~~~~~vi~n~~~~~~~~~~~~---------------~~~~~~~~i~~~G~~~~ 202 (359)
T cd03823 143 GGDAVIAPSRFLLDRYVA-----NGLFAEKISVIRNGIDLDRAKRPRR---------------APPGGRLRFGFIGQLTP 202 (359)
T ss_pred CCCEEEEeCHHHHHHHHH-----cCCCccceEEecCCcChhhcccccc---------------CCCCCceEEEEEecCcc
Confidence 338899999988777554 2344578999999999887654321 23456788999999999
Q ss_pred cccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHhhccE
Q 023290 96 GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDV 173 (284)
Q Consensus 96 ~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~~ad~ 173 (284)
.||++.+++++..+.+ ++++|+++|.+... ....... +..++|.++|+. +++..+|+.||+
T Consensus 203 ~k~~~~li~~~~~l~~---------~~~~l~i~G~~~~~-----~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ad~ 265 (359)
T cd03823 203 HKGVDLLLEAFKRLPR---------GDIELVIVGNGLEL-----EEESYEL---EGDPRVEFLGAYPQEEIDDFYAEIDV 265 (359)
T ss_pred ccCHHHHHHHHHHHHh---------cCcEEEEEcCchhh-----hHHHHhh---cCCCeEEEeCCCCHHHHHHHHHhCCE
Confidence 9999999999998754 68999999987532 2221111 455789999997 899999999999
Q ss_pred EEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 023290 174 LVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYE 253 (284)
Q Consensus 174 ~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~ 253 (284)
+++||.. .|++|++++|||+||+|||+++.++..+++.++.+|++++++| +++++++|.+++++++.++.+++++++
T Consensus 266 ~i~ps~~-~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d--~~~l~~~i~~l~~~~~~~~~~~~~~~~ 342 (359)
T cd03823 266 LVVPSIW-PENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGD--AEDLAAALERLIDDPDLLERLRAGIEP 342 (359)
T ss_pred EEEcCcc-cCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCC--HHHHHHHHHHHHhChHHHHHHHHhHHH
Confidence 9999972 6999999999999999999999999999999998999999998 999999999999999999999998887
Q ss_pred HHHHhcCHHHHHHHHHHHHH
Q 023290 254 RVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~ 273 (284)
.... +.+++++.++|+
T Consensus 343 ~~~~----~~~~~~~~~~~~ 358 (359)
T cd03823 343 PRSI----EDQAEEYLKLYR 358 (359)
T ss_pred hhhH----HHHHHHHHHHhh
Confidence 6543 888888888875
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-28 Score=202.86 Aligned_cols=205 Identities=18% Similarity=0.234 Sum_probs=164.6
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecc
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 92 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~ 92 (284)
.....+.+++.|+...+.+.. . .++.+||||+|.+.+...+ .++..++++|+
T Consensus 128 ~~~~~~~~~~~s~~~~~~~~~-------~--~~~~vi~ngvd~~~~~~~~-------------------~~~~~i~~~Gr 179 (335)
T cd03802 128 AARPDVPFVSISDAQRRPWPP-------L--PWVATVHNGIDLDDYPFRG-------------------PKGDYLLFLGR 179 (335)
T ss_pred hhCcCCeEEEecHHHHhhccc-------c--cccEEecCCcChhhCCCCC-------------------CCCCEEEEEEe
Confidence 345667788888877665322 1 6899999999988775421 24567889999
Q ss_pred ccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcC-CCCcEEEeccc--cCHHHHHh
Q 023290 93 VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKK-IQDRVHFVNKT--LTVAPYLA 169 (284)
Q Consensus 93 ~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~-~~~~v~~~~~~--~~~~~~~~ 169 (284)
+.+.||++.+++++.+ .+++++++|.+.. ...+.....+.. +.++|.|+|++ +++..+|+
T Consensus 180 ~~~~Kg~~~li~~~~~------------~~~~l~i~G~~~~-----~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~ 242 (335)
T cd03802 180 ISPEKGPHLAIRAARR------------AGIPLKLAGPVSD-----PDYFYREIAPELLDGPDIEYLGEVGGAEKAELLG 242 (335)
T ss_pred eccccCHHHHHHHHHh------------cCCeEEEEeCCCC-----HHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHH
Confidence 9999999999998653 6789999999852 233444444432 45799999997 56789999
Q ss_pred hccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHH
Q 023290 170 AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGK 249 (284)
Q Consensus 170 ~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~ 249 (284)
.+|++++||. +.|+||++++|||+||+|||+++.++..|++.++.+|+++++ +++++++|..+...+ .+
T Consensus 243 ~~d~~v~ps~-~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~----~~~l~~~l~~l~~~~------~~ 311 (335)
T cd03802 243 NARALLFPIL-WEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS----VEELAAAVARADRLD------RA 311 (335)
T ss_pred hCcEEEeCCc-ccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC----HHHHHHHHHHHhccH------HH
Confidence 9999999997 259999999999999999999999999999999999999985 899999999986543 23
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHH
Q 023290 250 RGYERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~ 273 (284)
++++.+.++|+|+.+++++.++|+
T Consensus 312 ~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 312 ACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhC
Confidence 566778899999999999999884
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-28 Score=204.34 Aligned_cols=199 Identities=22% Similarity=0.279 Sum_probs=161.7
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecc
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 92 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~ 92 (284)
.++.+|.++++|..+.+.+.+. ++ .+..+++||+|.+.+.... .....++++|+
T Consensus 150 ~~~~~d~ii~~S~~~~~~~~~~----~~---~~~~vi~~~~d~~~~~~~~-------------------~~~~~il~~G~ 203 (351)
T cd03804 150 SAARVDYFIANSRFVARRIKKY----YG---RDATVIYPPVDTDRFTPAE-------------------EKEDYYLSVGR 203 (351)
T ss_pred HhcCCCEEEECCHHHHHHHHHH----hC---CCcEEECCCCCHhhcCcCC-------------------CCCCEEEEEEc
Confidence 3578999999999999887553 22 3468999999987665322 13345789999
Q ss_pred ccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHhh
Q 023290 93 VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAA 170 (284)
Q Consensus 93 ~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~~ 170 (284)
+.+.||++.+++++..+ + ++|+++|+++ ..+.+++ +..++|.|+|++ +++.++|+.
T Consensus 204 ~~~~K~~~~li~a~~~~-----------~-~~l~ivG~g~-----~~~~l~~-----~~~~~V~~~g~~~~~~~~~~~~~ 261 (351)
T cd03804 204 LVPYKRIDLAIEAFNKL-----------G-KRLVVIGDGP-----ELDRLRA-----KAGPNVTFLGRVSDEELRDLYAR 261 (351)
T ss_pred CccccChHHHHHHHHHC-----------C-CcEEEEECCh-----hHHHHHh-----hcCCCEEEecCCCHHHHHHHHHh
Confidence 99999999999999764 5 8899999975 3444444 445799999997 559999999
Q ss_pred ccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHH
Q 023290 171 IDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKR 250 (284)
Q Consensus 171 ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~ 250 (284)
||++++||. |+||++++|||+||+|||+++.++..+++.++.+|++++++| +++++++|..++++++ .+.++
T Consensus 262 ad~~v~ps~---e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~--~~~la~~i~~l~~~~~---~~~~~ 333 (351)
T cd03804 262 ARAFLFPAE---EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQT--VESLAAAVERFEKNED---FDPQA 333 (351)
T ss_pred CCEEEECCc---CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCC--HHHHHHHHHHHHhCcc---cCHHH
Confidence 999999984 999999999999999999999999999999999999999988 9999999999999884 22333
Q ss_pred HHHHHHHhcCHHHHHHHH
Q 023290 251 GYERVKEIFQEHHMAERI 268 (284)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~ 268 (284)
+++.+. +|+|+.+.+++
T Consensus 334 ~~~~~~-~~~~~~~~~~~ 350 (351)
T cd03804 334 IRAHAE-RFSESRFREKI 350 (351)
T ss_pred HHHHHH-hcCHHHHHHHh
Confidence 444443 59999988775
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-27 Score=203.23 Aligned_cols=247 Identities=17% Similarity=0.113 Sum_probs=183.1
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcc-----------cCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCC
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRI-----------KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGV 80 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~-----------~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 80 (284)
+.+-.+|.+-+.+...++.+...+.+.+|. ...++.++|||+|++.|.+.............+|++++
T Consensus 179 ~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~- 257 (456)
T TIGR02400 179 EGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLK- 257 (456)
T ss_pred HHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcC-
Confidence 344457878888887777766645444443 34568899999999988764433222222345677763
Q ss_pred CCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHc--------CCC
Q 023290 81 RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK--------KIQ 152 (284)
Q Consensus 81 ~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~--------~~~ 152 (284)
++.+|+++||+.+.||++.+++|+.++.+..++. ..++.|+++|.+.....+....+++.++++ +..
T Consensus 258 --~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~---~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~ 332 (456)
T TIGR02400 258 --GRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEW---RGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTL 332 (456)
T ss_pred --CCeEEEEccccccccCHHHHHHHHHHHHHhCccc---cCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCC
Confidence 6678889999999999999999999987643211 024678888654323223445555555543 111
Q ss_pred C--cEEEec-c--ccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCC----EEEcCCCCcceeeecCCceeeecCC
Q 023290 153 D--RVHFVN-K--TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLP----VLGTAAGGTTEIVVNGTTGLLHPVG 223 (284)
Q Consensus 153 ~--~v~~~~-~--~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~P----vi~~~~~~~~e~v~~~~~g~~~~~~ 223 (284)
+ .+.+++ . .+++.++|+.||++++||. .||||++++||||||+| +|+|+.+|..+.+. +|+++++.
T Consensus 333 ~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~--~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~ 407 (456)
T TIGR02400 333 DWTPIRYLNRSYDREELMALYRAADVGLVTPL--RDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPY 407 (456)
T ss_pred CCccEEEEcCCCCHHHHHHHHHhCcEEEECcc--ccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCC
Confidence 1 144544 3 3799999999999999999 99999999999999999 99999888877773 69999999
Q ss_pred CCChHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 023290 224 KEGITPLAKNIVKLAT-HVERRLTMGKRGYERVKEIFQEHHMAERIAVVL 272 (284)
Q Consensus 224 d~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (284)
| +++++++|.++++ +++++++..++.++.+. .|++..+++++++-+
T Consensus 408 d--~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~-~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 408 D--IDGMADAIARALTMPLEEREERHRAMMDKLR-KNDVQRWREDFLSDL 454 (456)
T ss_pred C--HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh-hCCHHHHHHHHHHHh
Confidence 9 9999999999998 67888888899999876 499999999988655
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-27 Score=201.63 Aligned_cols=208 Identities=13% Similarity=0.111 Sum_probs=161.9
Q ss_pred cccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCC--CeEEEEecccc
Q 023290 17 VAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNE--DLLFAIINSVS 94 (284)
Q Consensus 17 ~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~i~~~g~~~ 94 (284)
+|.+++.|..+.++ . ..+.+..+|+|.+++.+.... .++.++ .++ ...++|+||+.
T Consensus 181 ~d~vi~pS~~~~~l-~-----------~~~i~~v~GVd~~~f~~~~~~---------~~~~~~-~~~~~~~~~l~vGRL~ 238 (462)
T PLN02846 181 CHKVIRLSAATQDY-P-----------RSIICNVHGVNPKFLEIGKLK---------LEQQKN-GEQAFTKGAYYIGKMV 238 (462)
T ss_pred cCEEEccCHHHHHH-h-----------hCEEecCceechhhcCCCccc---------HhhhcC-CCCCcceEEEEEecCc
Confidence 78888888755442 1 124444589999988754321 222222 233 24688999999
Q ss_pred ccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhccEE
Q 023290 95 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVL 174 (284)
Q Consensus 95 ~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad~~ 174 (284)
+.||++.+++++..+.. ..++++|+|+|+|+ ..+.+++.++++++...+ |.|. .+..++|..+|++
T Consensus 239 ~eK~~~~Li~a~~~l~~-------~~~~~~l~ivGdGp-----~~~~L~~~a~~l~l~~~v-f~G~-~~~~~~~~~~DvF 304 (462)
T PLN02846 239 WSKGYKELLKLLHKHQK-------ELSGLEVDLYGSGE-----DSDEVKAAAEKLELDVRV-YPGR-DHADPLFHDYKVF 304 (462)
T ss_pred ccCCHHHHHHHHHHHHh-------hCCCeEEEEECCCc-----cHHHHHHHHHhcCCcEEE-ECCC-CCHHHHHHhCCEE
Confidence 99999999999998765 23789999999997 678899999999876444 6665 4666899999999
Q ss_pred EEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 023290 175 VQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYER 254 (284)
Q Consensus 175 ~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 254 (284)
++||. .|+||++++||||||+|||+++.++ .+++.++.+|+.++ | .+++++++..++.++. ..+..+++
T Consensus 305 v~pS~--~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~--~~~~a~ai~~~l~~~~--~~~~~~a~-- 373 (462)
T PLN02846 305 LNPST--TDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--D--GKGFVRATLKALAEEP--APLTDAQR-- 373 (462)
T ss_pred EECCC--cccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--C--HHHHHHHHHHHHccCc--hhHHHHHH--
Confidence 99999 9999999999999999999999997 59999999998884 4 8999999999998532 22222222
Q ss_pred HHHhcCHHHHHHHHHHHHH
Q 023290 255 VKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~ 273 (284)
+.|||+..++++.++++
T Consensus 374 --~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 374 --HELSWEAATERFLRVAD 390 (462)
T ss_pred --HhCCHHHHHHHHHHHhc
Confidence 47999999999999986
|
|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-26 Score=195.00 Aligned_cols=256 Identities=18% Similarity=0.185 Sum_probs=175.0
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhh-----HH----HHHHHHHHHHhCCCCC
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNV-----AK----RVLREHVRESLGVRNE 83 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~-----~~----~~~~~~~r~~~~~~~~ 83 (284)
....+|.++++|+.++.... ..++.++++ |||||+++..+....... .+ ...+..++..++++++
T Consensus 223 aa~~Ad~fttVS~it~~E~~----~Ll~~~pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d 296 (590)
T cd03793 223 AAHCAHVFTTVSEITAYEAE----HLLKRKPDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLD 296 (590)
T ss_pred HHhhCCEEEECChHHHHHHH----HHhCCCCCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCC
Confidence 34578999999999888744 447777776 999999999886543211 01 1113446777888777
Q ss_pred CeEEEE-eccccc-cccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCC-------hHHH---------------
Q 023290 84 DLLFAI-INSVSR-GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ-------TKFE--------------- 139 (284)
Q Consensus 84 ~~~i~~-~g~~~~-~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~-------~~~~--------------- 139 (284)
+.+++| +||+.. .||++.+|+|+.++...++..+.+..=+-|+++-...... ....
T Consensus 297 ~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~ 376 (590)
T cd03793 297 KTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIG 376 (590)
T ss_pred CeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhh
Confidence 766666 799998 9999999999999998887754222223344443321100 0011
Q ss_pred ----------------------------------------------------HHHHHHHHHcCCC----Cc--EEEecc-
Q 023290 140 ----------------------------------------------------SELRNYVMQKKIQ----DR--VHFVNK- 160 (284)
Q Consensus 140 ----------------------------------------------------~~l~~~~~~~~~~----~~--v~~~~~- 160 (284)
+.+...+++.++. ++ |.|++.
T Consensus 377 ~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~ 456 (590)
T cd03793 377 KRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEF 456 (590)
T ss_pred hhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccc
Confidence 1111122222221 22 445442
Q ss_pred ------c--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcc----eeeecC-CceeeecCCC---
Q 023290 161 ------T--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTT----EIVVNG-TTGLLHPVGK--- 224 (284)
Q Consensus 161 ------~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~----e~v~~~-~~g~~~~~~d--- 224 (284)
. .+..++|+.||++++||. +|+||++++|||+||+|||+|+.+++. |.+.++ ..|+++.+.+
T Consensus 457 L~~~~~~~g~~y~E~~~g~dl~v~PS~--yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~ 534 (590)
T cd03793 457 LSSTNPLLGLDYEEFVRGCHLGVFPSY--YEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKS 534 (590)
T ss_pred cCCCCCcCCcchHHHhhhceEEEeccc--cCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecCCccc
Confidence 1 457889999999999999 999999999999999999999999884 444443 3577766321
Q ss_pred --CChHHHHHHHHHHhhCHHHHHHHHHHHH-HHHHHhcCHHHHHHHHHHHHHHHHH
Q 023290 225 --EGITPLAKNIVKLATHVERRLTMGKRGY-ERVKEIFQEHHMAERIAVVLKEVLK 277 (284)
Q Consensus 225 --~~~~~~~~~i~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (284)
.++++++++|.++++. +.++.+..+++ +...+.|+|+..+..|.+.+.-++.
T Consensus 535 ~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~ 589 (590)
T cd03793 535 PDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS 589 (590)
T ss_pred hHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 1388899999998854 45555655544 3455689999999999999988775
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-26 Score=199.10 Aligned_cols=246 Identities=17% Similarity=0.091 Sum_probs=176.9
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhccc------------CCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCC
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRIK------------MPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGV 80 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~------------~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 80 (284)
.+-.+|.+.+.+......+.+.+...++.. ..++.++|||+|++.+........ .+..+++..+.
T Consensus 184 ~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~---~~~~~~~~~~~ 260 (460)
T cd03788 184 GLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPE---VQERAAELRER 260 (460)
T ss_pred HHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCch---hHHHHHHHHHh
Confidence 334567777777665555444343333322 246889999999988875432211 12233344445
Q ss_pred CCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCC----hHHHHHHHHHHHHcCCC----
Q 023290 81 RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ----TKFESELRNYVMQKKIQ---- 152 (284)
Q Consensus 81 ~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~----~~~~~~l~~~~~~~~~~---- 152 (284)
.+++++|+++||+.+.||++.+++|+.++.+..++. ..+++|+++|.+.... .++.+.+++++.+.+..
T Consensus 261 ~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~---~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~ 337 (460)
T cd03788 261 LGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEW---RGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTL 337 (460)
T ss_pred cCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhh---cCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCC
Confidence 567888999999999999999999999887643221 0247888887653222 22445555555443321
Q ss_pred --CcEEEe-cc--ccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCC----EEEcCCCCcceeeecCCceeeecCC
Q 023290 153 --DRVHFV-NK--TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLP----VLGTAAGGTTEIVVNGTTGLLHPVG 223 (284)
Q Consensus 153 --~~v~~~-~~--~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~P----vi~~~~~~~~e~v~~~~~g~~~~~~ 223 (284)
..|.++ |. .+++..+|+.||++++||. .||||++++|||+||+| ||+++.+|..+. +.+|+++++.
T Consensus 338 ~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~--~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~p~ 412 (460)
T cd03788 338 DWTPVRYLYRSLPREELAALYRAADVALVTPL--RDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVNPY 412 (460)
T ss_pred CceeEEEEeCCCCHHHHHHHHHhccEEEeCcc--ccccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEECCC
Confidence 235554 54 3899999999999999999 99999999999999999 999988887665 4679999999
Q ss_pred CCChHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 023290 224 KEGITPLAKNIVKLATH-VERRLTMGKRGYERVKEIFQEHHMAERIAVVL 272 (284)
Q Consensus 224 d~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (284)
| +++++++|.+++++ +++++.+.+++++.+. .|+++.+++++.+-+
T Consensus 413 d--~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~-~~~~~~w~~~~l~~l 459 (460)
T cd03788 413 D--IDEVADAIHRALTMPLEERRERHRKLREYVR-THDVQAWANSFLDDL 459 (460)
T ss_pred C--HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHhh
Confidence 8 99999999999984 5788888888888875 699999999887643
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-26 Score=192.79 Aligned_cols=255 Identities=33% Similarity=0.401 Sum_probs=199.1
Q ss_pred cCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccc
Q 023290 14 LPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSV 93 (284)
Q Consensus 14 ~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~ 93 (284)
...++.+++.+..++.-++..+.. +...++.+++.++|.+.+.+..-. .+...+...|...+....+..+..+.++
T Consensus 207 ~~~~~~~~~ns~~~~~~f~~~~~~---L~~~d~~~~y~ei~~s~~~~~~~~-~~~~~~~~~r~~~~v~~~d~~~~siN~~ 282 (495)
T KOG0853|consen 207 TGLAWKILVNSYFTKRQFKATFVS---LSNSDITSTYPEIDGSWFTYGQYE-SHLELRLPVRLYRGVSGIDRFFPSINRF 282 (495)
T ss_pred hhccceEecchhhhhhhhhhhhhh---cCCCCcceeeccccchhccccccc-cchhcccccceeeeecccceEeeeeeec
Confidence 446778888888888877765433 445558889989987765531110 1111234445566777667788889999
Q ss_pred cccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecC-----CCCChHHHHHHHHHHHHcCC-CCcEEEeccccCH--H
Q 023290 94 SRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSD-----MNAQTKFESELRNYVMQKKI-QDRVHFVNKTLTV--A 165 (284)
Q Consensus 94 ~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~-----~~~~~~~~~~l~~~~~~~~~-~~~v~~~~~~~~~--~ 165 (284)
.+.|++..+++++..+....++. +.++.+++++|+. .++..++.+++.++++++++ .+.+.|+....+. .
T Consensus 283 ~pgkd~~l~l~a~~~~~~~i~~~--~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~y 360 (495)
T KOG0853|consen 283 EPGKDQDLALPAFTLLHDSIPEP--SISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAKY 360 (495)
T ss_pred CCCCCceeehhhHHhhhcccCCC--CCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHHH
Confidence 99999999999999988766542 4478889999943 33445588899999999988 4677887776444 4
Q ss_pred HHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHH
Q 023290 166 PYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRL 245 (284)
Q Consensus 166 ~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~ 245 (284)
.+++.+.++++... .|.||++++|||+||+|||++++||..|++.++.+|++++++...+..+++++.++..|++.+.
T Consensus 361 rl~adt~~v~~qPa--~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp~~e~~~~~a~~~~kl~~~p~l~~ 438 (495)
T KOG0853|consen 361 RLAADTKGVLYQPA--NEHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLIDPGQEAVAELADALLKLRRDPELWA 438 (495)
T ss_pred HHHHhcceEEecCC--CCCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceeeCCchHHHHHHHHHHHHHhcCHHHHH
Confidence 45566666666665 7999999999999999999999999999999999999999964333379999999999999999
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 023290 246 TMGKRGYERVKEIFQEHHMAERIAVVLKEVL 276 (284)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (284)
+|++++++++.+.|+|+.+.+++.+++....
T Consensus 439 ~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~ 469 (495)
T KOG0853|consen 439 RMGKNGLKRVKEMFSWQHYSERIASVLGKYL 469 (495)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhHhcC
Confidence 9999999999999999999999999887554
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-25 Score=193.50 Aligned_cols=235 Identities=17% Similarity=0.141 Sum_probs=173.9
Q ss_pred ccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEe
Q 023290 11 VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII 90 (284)
Q Consensus 11 ~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~ 90 (284)
...++.+|.+++.|+...+.+.+ +|.+.+ +.+++|. +.+........ .....++++++ +++.+++++
T Consensus 173 r~~~~~~d~ii~~S~~~~~~l~~-----~g~~~~-i~vi~n~-~~d~~~~~~~~----~~~~~~r~~~~--~~~~vil~~ 239 (425)
T PRK05749 173 RLLFKNIDLVLAQSEEDAERFLA-----LGAKNE-VTVTGNL-KFDIEVPPELA----ARAATLRRQLA--PNRPVWIAA 239 (425)
T ss_pred HHHHHhCCEEEECCHHHHHHHHH-----cCCCCC-cEecccc-cccCCCChhhH----HHHHHHHHHhc--CCCcEEEEe
Confidence 34566789999999999887554 567666 8889885 22222111110 11355677776 355667777
Q ss_pred ccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCC-------------cEEE
Q 023290 91 NSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQD-------------RVHF 157 (284)
Q Consensus 91 g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~-------------~v~~ 157 (284)
|+. .|+.+.+++|+..+.+ .+++++|+|+|+++. ..+.+++.+++.|+.. .|.+
T Consensus 240 ~~~--~~~~~~ll~A~~~l~~-------~~~~~~liivG~g~~----r~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l 306 (425)
T PRK05749 240 STH--EGEEELVLDAHRALLK-------QFPNLLLILVPRHPE----RFKEVEELLKKAGLSYVRRSQGEPPSADTDVLL 306 (425)
T ss_pred CCC--chHHHHHHHHHHHHHH-------hCCCcEEEEcCCChh----hHHHHHHHHHhCCCcEEEccCCCCCCCCCcEEE
Confidence 753 5788999999988765 338999999998751 2367888888888742 3444
Q ss_pred eccccCHHHHHhhccEEEE-cCCCCcCccchhHHHHHhcCCCEEEcCC-CCcceeeecC-CceeeecCCCCChHHHHHHH
Q 023290 158 VNKTLTVAPYLAAIDVLVQ-NSQAWGECFGRITIEAMAFQLPVLGTAA-GGTTEIVVNG-TTGLLHPVGKEGITPLAKNI 234 (284)
Q Consensus 158 ~~~~~~~~~~~~~ad~~~~-ps~~~~e~~~~~~~Eama~G~Pvi~~~~-~~~~e~v~~~-~~g~~~~~~d~~~~~~~~~i 234 (284)
.+...++..+|+.||++++ +|. .|++|.+++|||+||+|||+++. ++..+.++.. .+|.++.++| +++++++|
T Consensus 307 ~~~~~el~~~y~~aDi~~v~~S~--~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d--~~~La~~l 382 (425)
T PRK05749 307 GDTMGELGLLYAIADIAFVGGSL--VKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAIQVED--AEDLAKAV 382 (425)
T ss_pred EecHHHHHHHHHhCCEEEECCCc--CCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeEEECC--HHHHHHHH
Confidence 4445689999999999666 565 68899999999999999999765 5556655442 4688888888 99999999
Q ss_pred HHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Q 023290 235 VKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKK 278 (284)
Q Consensus 235 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (284)
..+++|++.+++|++++++.+.++ ....+++.+++.+.+.+
T Consensus 383 ~~ll~~~~~~~~m~~~a~~~~~~~---~~~~~~~~~~l~~~l~~ 423 (425)
T PRK05749 383 TYLLTDPDARQAYGEAGVAFLKQN---QGALQRTLQLLEPYLPP 423 (425)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHhC---ccHHHHHHHHHHHhccc
Confidence 999999999999999999988764 36667777877776654
|
|
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=189.66 Aligned_cols=196 Identities=16% Similarity=0.147 Sum_probs=150.7
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecc
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 92 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~ 92 (284)
.++.+|.++++|+...+.+.+ .+|.+ +.+|+|+. .+.+.+.... .... .+...+++++|+
T Consensus 162 ~~~~ad~ii~~S~~~~~~l~~----~~g~~---i~vi~n~~-~~~f~~~~~~-----------~~~~-~~~~~~i~~~gr 221 (371)
T PLN02275 162 YGKMADGHLCVTKAMQHELDQ----NWGIR---ATVLYDQP-PEFFRPASLE-----------IRLR-PNRPALVVSSTS 221 (371)
T ss_pred HHhhCCEEEECCHHHHHHHHH----hcCCC---eEEECCCC-HHHcCcCCch-----------hccc-CCCcEEEEEeCc
Confidence 356789999999999888544 24443 88999985 3444332110 0111 124456778999
Q ss_pred ccccccHHHHHHHHHHHHHHHHhhc----------cCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEec-c-
Q 023290 93 VSRGKGQDLFLHSFYESLELIKEKK----------LEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN-K- 160 (284)
Q Consensus 93 ~~~~k~~~~~~~a~~~l~~~~~~~~----------~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~-~- 160 (284)
+.+.||++.+++|+..+..++.... ...++++|+++|+|+ ..+.+++.++++++.+ +.|.+ +
T Consensus 222 l~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~-----~~~~l~~~~~~~~l~~-v~~~~~~~ 295 (371)
T PLN02275 222 WTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGP-----QKAMYEEKISRLNLRH-VAFRTMWL 295 (371)
T ss_pred eeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCC-----CHHHHHHHHHHcCCCc-eEEEcCCC
Confidence 9999999999999988753321100 023789999999987 6789999999999975 77765 3
Q ss_pred -ccCHHHHHhhccEEEEcCC-CCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHh
Q 023290 161 -TLTVAPYLAAIDVLVQNSQ-AWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLA 238 (284)
Q Consensus 161 -~~~~~~~~~~ad~~~~ps~-~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~ 238 (284)
.+++..+|+.||++++|+. .+.+++|++++||||||+|||+++.++..|+++++.+|++++ + +++++++|.+++
T Consensus 296 ~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~--~~~la~~i~~l~ 371 (371)
T PLN02275 296 EAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--S--SSELADQLLELL 371 (371)
T ss_pred CHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--C--HHHHHHHHHHhC
Confidence 3899999999999998642 125889999999999999999999999999999999999997 4 899999998764
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-24 Score=198.61 Aligned_cols=256 Identities=16% Similarity=0.135 Sum_probs=189.0
Q ss_pred cccccCCcccccccchhhHHHHHHHHHHHhccc-----------CCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHh
Q 023290 10 YVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIK-----------MPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESL 78 (284)
Q Consensus 10 ~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~-----------~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~ 78 (284)
+.+.+-.+|.|-+.+...++.+.+.+.+.++.. ..++.++|||+|++.+...............+++.+
T Consensus 197 il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~ 276 (797)
T PLN03063 197 LLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFF 276 (797)
T ss_pred HHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhc
Confidence 334455778788888887777766555444432 246889999999987765432221122223555555
Q ss_pred CCCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcC--CCCc--
Q 023290 79 GVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKK--IQDR-- 154 (284)
Q Consensus 79 ~~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~--~~~~-- 154 (284)
+ ++.+|+++||+.+.||++.+++|+.++.+..++. ..++.|++++.+........+.+++.++++. +...
T Consensus 277 ~---~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~---~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g 350 (797)
T PLN03063 277 A---GRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEW---RDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFG 350 (797)
T ss_pred C---CCeEEEEecccccccCHHHHHHHHHHHHHhCccc---cCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccc
Confidence 4 5677889999999999999999999987643221 0234556555433223335566666666653 3221
Q ss_pred ------EEEec-cc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCC----EEEcCCCCcceeeecCCceeeec
Q 023290 155 ------VHFVN-KT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLP----VLGTAAGGTTEIVVNGTTGLLHP 221 (284)
Q Consensus 155 ------v~~~~-~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~P----vi~~~~~~~~e~v~~~~~g~~~~ 221 (284)
|++++ .. +++..+|+.||++++||. .||||++++||||||+| +|+|..+|..+.+ +.+|++++
T Consensus 351 ~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSl--rEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allVn 426 (797)
T PLN03063 351 SVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSL--RDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLVN 426 (797)
T ss_pred cCCCceeEEecCCCCHHHHHHHHHhCCEEEeCcc--ccccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEEC
Confidence 33443 22 789999999999999999 99999999999999999 9999999888876 55799999
Q ss_pred CCCCChHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Q 023290 222 VGKEGITPLAKNIVKLAT-HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKK 278 (284)
Q Consensus 222 ~~d~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (284)
|.| +++++++|.+++. +++++++..++.++.+. .++|...++.+++.+.++..+
T Consensus 427 P~D--~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~-~~~~~~Wa~~fl~~l~~~~~~ 481 (797)
T PLN03063 427 PWN--ITEVSSAIKEALNMSDEERETRHRHNFQYVK-THSAQKWADDFMSELNDIIVE 481 (797)
T ss_pred CCC--HHHHHHHHHHHHhCCHHHHHHHHHHHHHhhh-hCCHHHHHHHHHHHHHHHhhh
Confidence 999 9999999999999 78888888888888886 599999999999999887654
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.4e-24 Score=181.10 Aligned_cols=229 Identities=13% Similarity=0.099 Sum_probs=167.5
Q ss_pred cccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEE
Q 023290 10 YVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 89 (284)
Q Consensus 10 ~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~ 89 (284)
..+..+.+|.+++.|....+.+.+ .|++.+++.+++++++.++...... +..+|+++|++++.+++++
T Consensus 144 ~~w~~~~~d~~~~~s~~~~~~l~~-----~g~~~~ki~v~g~~v~~~f~~~~~~-------~~~~r~~~gl~~~~~~il~ 211 (382)
T PLN02605 144 PTWFHKGVTRCFCPSEEVAKRALK-----RGLEPSQIRVYGLPIRPSFARAVRP-------KDELRRELGMDEDLPAVLL 211 (382)
T ss_pred cccccCCCCEEEECCHHHHHHHHH-----cCCCHHHEEEECcccCHhhccCCCC-------HHHHHHHcCCCCCCcEEEE
Confidence 345567899999999888776443 5888899999999998766543221 3668899999988899999
Q ss_pred eccccccccHHHHHHHHHHHHHHHHhhccCCCCeE-EEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHH
Q 023290 90 INSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVH-AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYL 168 (284)
Q Consensus 90 ~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~-l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~ 168 (284)
+|+....|++..+++++..+...... ..++.+ ++++|.+. ...+.+++. ....+|.++|+++++.++|
T Consensus 212 ~Gg~~g~~~~~~li~~l~~~~~~~~~---~~~~~~~~vi~G~~~----~~~~~L~~~----~~~~~v~~~G~~~~~~~l~ 280 (382)
T PLN02605 212 MGGGEGMGPLEETARALGDSLYDKNL---GKPIGQVVVICGRNK----KLQSKLESR----DWKIPVKVRGFVTNMEEWM 280 (382)
T ss_pred ECCCcccccHHHHHHHHHHhhccccc---cCCCceEEEEECCCH----HHHHHHHhh----cccCCeEEEeccccHHHHH
Confidence 99988889999999988764310000 015565 56667542 133444433 2234799999999999999
Q ss_pred hhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC-----CcceeeecCCceeeecCCCCChHHHHHHHHHHhhC-HH
Q 023290 169 AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG-----GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH-VE 242 (284)
Q Consensus 169 ~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~-----~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~-~~ 242 (284)
+.||+++.++ .|++++|||+||+|+|+++.. +..+++.+++.|+.+ .| +++++++|.+++.+ ++
T Consensus 281 ~aaDv~V~~~------g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~--~~--~~~la~~i~~ll~~~~~ 350 (382)
T PLN02605 281 GACDCIITKA------GPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDNGFGAFS--ES--PKEIARIVAEWFGDKSD 350 (382)
T ss_pred HhCCEEEECC------CcchHHHHHHcCCCEEEecCCCccchhhHHHHHhCCceeec--CC--HHHHHHHHHHHHcCCHH
Confidence 9999999754 278999999999999999842 222334455566654 55 99999999999998 99
Q ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 023290 243 RRLTMGKRGYERVKEIFQEHHMAERIAVVL 272 (284)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (284)
.+++|++++++... ..+.+.+++.+.+..
T Consensus 351 ~~~~m~~~~~~~~~-~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 351 ELEAMSENALKLAR-PEAVFDIVHDLHELV 379 (382)
T ss_pred HHHHHHHHHHHhcC-CchHHHHHHHHHHHh
Confidence 99999999988664 466677776665543
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-23 Score=190.10 Aligned_cols=253 Identities=16% Similarity=0.119 Sum_probs=179.5
Q ss_pred ccccCCcccccccchhhHHHHHHHHHHHhcc-----------cCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhC
Q 023290 11 VKHLPLVAGAMIDSHVTAEYWKNRTRERLRI-----------KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLG 79 (284)
Q Consensus 11 ~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~-----------~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~ 79 (284)
.+.+-.+|.+-+.+....+.+.+.+.+.++. ...++.++|+|+|++.+.+.............+|+.+
T Consensus 184 l~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~- 262 (726)
T PRK14501 184 LEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDL- 262 (726)
T ss_pred HHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHc-
Confidence 3444466767777777666666655554442 1235789999999998876543222222234455554
Q ss_pred CCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCC----hHHHHHHHHHHHHcC----C
Q 023290 80 VRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ----TKFESELRNYVMQKK----I 151 (284)
Q Consensus 80 ~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~----~~~~~~l~~~~~~~~----~ 151 (284)
+++.+|+++||+.+.||+..+++|+.++.+..++. ..+++|+++|.+.... .++...+.+++.+.+ .
T Consensus 263 --~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~---~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~ 337 (726)
T PRK14501 263 --RGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEW---RGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGT 337 (726)
T ss_pred --CCCEEEEEecCcccccCHHHHHHHHHHHHHhCccc---cCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCC
Confidence 35678889999999999999999999987643211 1247899887543222 123333444433322 1
Q ss_pred ---CCcEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhc-----CCCEEEcCCCCcceeeecCCceeeec
Q 023290 152 ---QDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAF-----QLPVLGTAAGGTTEIVVNGTTGLLHP 221 (284)
Q Consensus 152 ---~~~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~-----G~Pvi~~~~~~~~e~v~~~~~g~~~~ 221 (284)
..-+.+.+.. +++..+|+.||++++||. .||||++++|||+| |.||++...|+..++. .|++++
T Consensus 338 ~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~--~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv~ 411 (726)
T PRK14501 338 VDWTPIHYFYRSLPFEELVALYRAADVALVTPL--RDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLVN 411 (726)
T ss_pred CCcceEEEEeCCCCHHHHHHHHHhccEEEeccc--ccccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEEC
Confidence 1123455543 899999999999999999 99999999999999 5577777778887775 389999
Q ss_pred CCCCChHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Q 023290 222 VGKEGITPLAKNIVKLATH-VERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKK 278 (284)
Q Consensus 222 ~~d~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (284)
|.| +++++++|.+++.+ .+++.....++++.+. .|+|+.+++++++.|.++..+
T Consensus 412 P~d--~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~-~~~~~~w~~~~l~~l~~~~~~ 466 (726)
T PRK14501 412 PND--IEGIAAAIKRALEMPEEEQRERMQAMQERLR-RYDVHKWASDFLDELREAAEK 466 (726)
T ss_pred CCC--HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHhh
Confidence 999 99999999999985 4556666677888875 699999999999999988654
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.4e-22 Score=171.50 Aligned_cols=228 Identities=11% Similarity=0.119 Sum_probs=167.5
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCe-EEEEe
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDL-LFAII 90 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~i~~~ 90 (284)
+..+.+|.+++.|+...+.+.+ .|++.+++.+++++++..+..... +...++++|++++.. ++++.
T Consensus 143 w~~~~~d~~~v~s~~~~~~l~~-----~gi~~~ki~v~GiPv~~~f~~~~~--------~~~~~~~~~l~~~~~~ilv~~ 209 (391)
T PRK13608 143 WITPYSTRYYVATKETKQDFID-----VGIDPSTVKVTGIPIDNKFETPID--------QKQWLIDNNLDPDKQTILMSA 209 (391)
T ss_pred cccCCCCEEEECCHHHHHHHHH-----cCCCHHHEEEECeecChHhccccc--------HHHHHHHcCCCCCCCEEEEEC
Confidence 3457899999999888777543 478888999988888765543221 245677889876654 55678
Q ss_pred ccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhh
Q 023290 91 NSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA 170 (284)
Q Consensus 91 g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 170 (284)
|++...|+++.+++++.+ ..++++++++++... ...+.+++ ..+..++|.++|+++++.++|+.
T Consensus 210 G~lg~~k~~~~li~~~~~----------~~~~~~~vvv~G~~~---~l~~~l~~---~~~~~~~v~~~G~~~~~~~~~~~ 273 (391)
T PRK13608 210 GAFGVSKGFDTMITDILA----------KSANAQVVMICGKSK---ELKRSLTA---KFKSNENVLILGYTKHMNEWMAS 273 (391)
T ss_pred CCcccchhHHHHHHHHHh----------cCCCceEEEEcCCCH---HHHHHHHH---HhccCCCeEEEeccchHHHHHHh
Confidence 999888999999987532 126788876654321 12233333 33344589999999999999999
Q ss_pred ccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCC-CC----cceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHH
Q 023290 171 IDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA-GG----TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRL 245 (284)
Q Consensus 171 ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~-~~----~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~ 245 (284)
||+++..+ .|+++.|||++|+|+|+++. ++ +..++.+.+.|+.. .+ +++++++|.++++|++.++
T Consensus 274 aDl~I~k~------gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~--~~--~~~l~~~i~~ll~~~~~~~ 343 (391)
T PRK13608 274 SQLMITKP------GGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA--DT--PEEAIKIVASLTNGNEQLT 343 (391)
T ss_pred hhEEEeCC------chHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe--CC--HHHHHHHHHHHhcCHHHHH
Confidence 99999532 47899999999999999863 33 12233344455543 35 8999999999999999999
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhh
Q 023290 246 TMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKS 279 (284)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (284)
+|++++++... .++++.+++.+.+++..+...+
T Consensus 344 ~m~~~~~~~~~-~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 344 NMISTMEQDKI-KYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred HHHHHHHHhcC-CCCHHHHHHHHHHHhhhhhhhh
Confidence 99999998765 5999999999999987665544
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.2e-22 Score=170.82 Aligned_cols=225 Identities=9% Similarity=0.049 Sum_probs=167.5
Q ss_pred ccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCC-eEEEE
Q 023290 11 VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNED-LLFAI 89 (284)
Q Consensus 11 ~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~i~~ 89 (284)
....+.+|.+++.|+...+.+.+ .|++.+++.+++++++..+..... +..++++++++++. +++++
T Consensus 142 ~~~~~~ad~i~~~s~~~~~~l~~-----~gi~~~ki~v~G~p~~~~f~~~~~--------~~~~~~~~~l~~~~~~il~~ 208 (380)
T PRK13609 142 IWVHREVDRYFVATDHVKKVLVD-----IGVPPEQVVETGIPIRSSFELKIN--------PDIIYNKYQLCPNKKILLIM 208 (380)
T ss_pred ccccCCCCEEEECCHHHHHHHHH-----cCCChhHEEEECcccChHHcCcCC--------HHHHHHHcCCCCCCcEEEEE
Confidence 34567899999999988776544 578888898887777654332211 24468889998654 45666
Q ss_pred eccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHh
Q 023290 90 INSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA 169 (284)
Q Consensus 90 ~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~ 169 (284)
.|+....|++..+++++... ++++++++|++.. ...+.+++.++..+ ++|+++|+.+++.++|+
T Consensus 209 ~G~~~~~k~~~~li~~l~~~-----------~~~~~viv~G~~~---~~~~~l~~~~~~~~--~~v~~~g~~~~~~~l~~ 272 (380)
T PRK13609 209 AGAHGVLGNVKELCQSLMSV-----------PDLQVVVVCGKNE---ALKQSLEDLQETNP--DALKVFGYVENIDELFR 272 (380)
T ss_pred cCCCCCCcCHHHHHHHHhhC-----------CCcEEEEEeCCCH---HHHHHHHHHHhcCC--CcEEEEechhhHHHHHH
Confidence 78888889998888876431 6789887754321 24567777776654 58999999989999999
Q ss_pred hccEEEEcCCCCcCccchhHHHHHhcCCCEEEcC-CCCcc----eeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHH
Q 023290 170 AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA-AGGTT----EIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERR 244 (284)
Q Consensus 170 ~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~-~~~~~----e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~ 244 (284)
.||+++. ++.|++++|||++|+|+|+++ .++.. +++. .+|..+...| +++++++|.++++|++.+
T Consensus 273 ~aD~~v~------~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~--~~G~~~~~~~--~~~l~~~i~~ll~~~~~~ 342 (380)
T PRK13609 273 VTSCMIT------KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFE--RKGAAVVIRD--DEEVFAKTEALLQDDMKL 342 (380)
T ss_pred hccEEEe------CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHH--hCCcEEEECC--HHHHHHHHHHHHCCHHHH
Confidence 9999884 224789999999999999976 44421 2332 2355455566 999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 023290 245 LTMGKRGYERVKEIFQEHHMAERIAVVLKEV 275 (284)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (284)
++|++++++... .++++.+++.+.+++...
T Consensus 343 ~~m~~~~~~~~~-~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 343 LQMKEAMKSLYL-PEPADHIVDDILAENHVE 372 (380)
T ss_pred HHHHHHHHHhCC-CchHHHHHHHHHHhhhhh
Confidence 999999887554 589999999998887654
|
|
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.5e-23 Score=175.13 Aligned_cols=219 Identities=16% Similarity=0.067 Sum_probs=150.3
Q ss_pred ccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEe
Q 023290 11 VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII 90 (284)
Q Consensus 11 ~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~ 90 (284)
...++.+|.+++.|....+.+++ ++ +++++++||+|.+.|........ ..+.. ...++++++|+
T Consensus 148 ~~~~~~ad~vi~~S~~l~~~~~~-----~~---~~i~~i~ngvd~~~f~~~~~~~~------~~~~~--~~~~~~~i~y~ 211 (373)
T cd04950 148 RRLLKRADLVFTTSPSLYEAKRR-----LN---PNVVLVPNGVDYEHFAAARDPPP------PPADL--AALPRPVIGYY 211 (373)
T ss_pred HHHHHhCCEEEECCHHHHHHHhh-----CC---CCEEEcccccCHHHhhcccccCC------ChhHH--hcCCCCEEEEE
Confidence 35567899999999988876544 22 68999999999987765332110 00111 12356789999
Q ss_pred ccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHH
Q 023290 91 NSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYL 168 (284)
Q Consensus 91 g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~ 168 (284)
|++.+.++.+.+.++... .++++|+++|.+... .... .+...++|+++|.+ +++..+|
T Consensus 212 G~l~~~~d~~ll~~la~~-----------~p~~~~vliG~~~~~-----~~~~----~~~~~~nV~~~G~~~~~~l~~~l 271 (373)
T cd04950 212 GAIAEWLDLELLEALAKA-----------RPDWSFVLIGPVDVS-----IDPS----ALLRLPNVHYLGPKPYKELPAYL 271 (373)
T ss_pred eccccccCHHHHHHHHHH-----------CCCCEEEEECCCcCc-----cChh----HhccCCCEEEeCCCCHHHHHHHH
Confidence 999997777655443321 289999999987211 1111 11113589999987 7899999
Q ss_pred hhccEEEEcCCC---CcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHH
Q 023290 169 AAIDVLVQNSQA---WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRL 245 (284)
Q Consensus 169 ~~ad~~~~ps~~---~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~ 245 (284)
+.||++++|+.. ..+++|++++||||||+|||+++.++..+. ...++++ ++| +++++++|.+++.++...+
T Consensus 272 ~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~~---~~~~~~~-~~d--~~~~~~ai~~~l~~~~~~~ 345 (373)
T cd04950 272 AGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVRRY---EDEVVLI-ADD--PEEFVAAIEKALLEDGPAR 345 (373)
T ss_pred HhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHHhh---cCcEEEe-CCC--HHHHHHHHHHHHhcCCchH
Confidence 999999999862 134679999999999999999987655443 3334444 455 9999999999766432211
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 023290 246 TMGKRGYERVKEIFQEHHMAERIAVVLKE 274 (284)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (284)
.. ++++ +.+.+||+..++++.+.+.+
T Consensus 346 ~~--~~~~-~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 346 ER--RRLR-LAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HH--HHHH-HHHHCCHHHHHHHHHHHHHh
Confidence 11 2222 45679999999999966653
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-21 Score=167.24 Aligned_cols=250 Identities=20% Similarity=0.171 Sum_probs=198.5
Q ss_pred cccccCCcccccccchhhHHHHHHH-----HHHHhcccCCCeEEEecCCccccchhhhhhh-----------HHHHHHHH
Q 023290 10 YVKHLPLVAGAMIDSHVTAEYWKNR-----TRERLRIKMPDTYVVHLGNSKELMEVAEDNV-----------AKRVLREH 73 (284)
Q Consensus 10 ~~~~~~~~~~~i~~s~~~~~~~~~~-----~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~-----------~~~~~~~~ 73 (284)
+...+..+|.+.++|...++.+... +...+.....+++-|-||+|.+.+.+..+.. .+...+..
T Consensus 202 lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~ 281 (487)
T COG0297 202 LKGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVA 281 (487)
T ss_pred hhhhheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHH
Confidence 3456678999999999887775510 0011112235788999999999887765531 26667889
Q ss_pred HHHHhCCCC--CCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCC
Q 023290 74 VRESLGVRN--EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKI 151 (284)
Q Consensus 74 ~r~~~~~~~--~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~ 151 (284)
+++++|++. +.+++.++||+..+||++.+++++..+.+ ...+++++|.+.+ .+.+.+..+.+++..
T Consensus 282 L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~---------~~~~~vilG~gd~---~le~~~~~la~~~~~ 349 (487)
T COG0297 282 LQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLE---------QGWQLVLLGTGDP---ELEEALRALASRHPG 349 (487)
T ss_pred HHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHH---------hCceEEEEecCcH---HHHHHHHHHHHhcCc
Confidence 999999983 56899999999999999999999999887 5699999999843 377888888887653
Q ss_pred CCcEEE-eccccC-HHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeec--------CCceeeec
Q 023290 152 QDRVHF-VNKTLT-VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN--------GTTGLLHP 221 (284)
Q Consensus 152 ~~~v~~-~~~~~~-~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~--------~~~g~~~~ 221 (284)
++.+ ++..+. ...+|+.||++++||+ +|+||++-++||.+|+++|+..+||..+.|.+ ..+|+++.
T Consensus 350 --~~~~~i~~~~~la~~i~agaD~~lmPSr--fEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~ 425 (487)
T COG0297 350 --RVLVVIGYDEPLAHLIYAGADVILMPSR--FEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFL 425 (487)
T ss_pred --eEEEEeeecHHHHHHHHhcCCEEEeCCc--CcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEe
Confidence 4443 444433 4567899999999999 99999999999999999999999999998875 47899999
Q ss_pred CCCCChHHHHHHHHHHhh---CHHH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhc
Q 023290 222 VGKEGITPLAKNIVKLAT---HVER-RLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSK 280 (284)
Q Consensus 222 ~~d~~~~~~~~~i~~l~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (284)
+.+ +++++.+|.+.+. .++. .+.+..++.. ..|+|+..+.++.++|+.+++...
T Consensus 426 ~~~--~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~~~~~~~~ 483 (487)
T COG0297 426 QTN--PDHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYKPLLSKPF 483 (487)
T ss_pred cCC--HHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHHHHhcccc
Confidence 987 9999999998765 4444 6777666655 679999999999999999987653
|
|
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-20 Score=162.02 Aligned_cols=248 Identities=14% Similarity=0.093 Sum_probs=182.5
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccC--------------------------------CCeEEEecCCccccch
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKM--------------------------------PDTYVVHLGNSKELME 59 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~--------------------------------~~i~vi~~g~~~~~~~ 59 (284)
+.+-.+|.+=+.+...++.+.+-+.+.+|... -++.++|.|+|++.+.
T Consensus 184 ~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~ 263 (487)
T TIGR02398 184 GSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIR 263 (487)
T ss_pred HHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHH
Confidence 33445666666777666666654444433221 1268899999999886
Q ss_pred hhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCCh---
Q 023290 60 VAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQT--- 136 (284)
Q Consensus 60 ~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~--- 136 (284)
..............+|++++ ++.+|+.++|+++.||+...++|+.++++..++. ..+++|+++|.+.....
T Consensus 264 ~~~~~~~~~~~~~~lr~~~~---~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~---~gkv~Lvqi~~psr~~v~~y 337 (487)
T TIGR02398 264 SALAAASIREMMERIRSELA---GVKLILSAERVDYTKGILEKLNAYERLLERRPEL---LGKVTLVTACVPAASGMTIY 337 (487)
T ss_pred HHhcCchHHHHHHHHHHHcC---CceEEEEecccccccCHHHHHHHHHHHHHhCccc---cCceEEEEEeCCCcccchHH
Confidence 65433333333567888887 5678889999999999999999999998754332 13579999988654332
Q ss_pred -HHHHHHHHHHHHc-------CCCCcEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCC----CEEEc
Q 023290 137 -KFESELRNYVMQK-------KIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQL----PVLGT 202 (284)
Q Consensus 137 -~~~~~l~~~~~~~-------~~~~~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~----Pvi~~ 202 (284)
++..++++++.+. +..+-+.+.+.. +++..+|+.||+++.+|. .+|++++..||++|+. |+|.|
T Consensus 338 ~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~l--rDGmNLVa~Eyva~~~~~~GvLILS 415 (487)
T TIGR02398 338 DELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPL--RDGLNLVAKEYVAAQGLLDGVLVLS 415 (487)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcc--ccccCcchhhHHhhhcCCCCCEEEe
Confidence 2445555555553 334446666664 789999999999999999 9999999999999988 99999
Q ss_pred CCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 023290 203 AAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH-VERRLTMGKRGYERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 203 ~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (284)
..+|..+.+ ..+++++|.| +++++++|.+.++. .+++++..+..++.+. .++....++.+++-+.
T Consensus 416 efaGaa~~l---~~AllVNP~d--~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~-~~d~~~W~~~fl~~l~ 481 (487)
T TIGR02398 416 EFAGAAVEL---KGALLTNPYD--PVRMDETIYVALAMPKAEQQARMREMFDAVN-YYDVQRWADEFLAAVS 481 (487)
T ss_pred ccccchhhc---CCCEEECCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh-hCCHHHHHHHHHHHhh
Confidence 999887665 3589999999 99999999999994 4566666666677665 5888888888776553
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.3e-20 Score=153.46 Aligned_cols=225 Identities=28% Similarity=0.392 Sum_probs=176.1
Q ss_pred cccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCC--eEEEEecccc
Q 023290 17 VAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNED--LLFAIINSVS 94 (284)
Q Consensus 17 ~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~--~~i~~~g~~~ 94 (284)
.+.++..+......++.. ....++.+++++++.+.+... ..++.++. ..++++|++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~i~~~g~~~ 209 (381)
T COG0438 151 ADRVIAVSPALKELLEAL------GVPNKIVVIPNGIDTEKFAPA---------------RIGLLPEGGKFVVLYVGRLD 209 (381)
T ss_pred ccEEEECCHHHHHHHHHh------CCCCCceEecCCcCHHHcCcc---------------ccCCCcccCceEEEEeeccC
Confidence 444555555543333322 222368899999998866532 11122233 6888999999
Q ss_pred ccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEecccc--CHHHHHhhcc
Q 023290 95 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL--TVAPYLAAID 172 (284)
Q Consensus 95 ~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~--~~~~~~~~ad 172 (284)
+.||++.+++++..+... .+++.++++|.+... ...+...+...+..+++.++|... ++..+++.||
T Consensus 210 ~~k~~~~~i~~~~~~~~~-------~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~ 278 (381)
T COG0438 210 PEKGLDLLIEAAAKLKKR-------GPDIKLVIVGDGPER----REELEKLAKKLGLEDNVKFLGYVPDEELAELLASAD 278 (381)
T ss_pred hhcCHHHHHHHHHHhhhh-------cCCeEEEEEcCCCcc----HHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCC
Confidence 999999999999988652 244899999997632 345666777777777899999864 7788899999
Q ss_pred EEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHH
Q 023290 173 VLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGY 252 (284)
Q Consensus 173 ~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 252 (284)
++++||. .|++|++++|||++|+|||+++.++..+.+.++.+|+++...+ ++++++++..++++.+.++.+...++
T Consensus 279 ~~v~ps~--~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~ 354 (381)
T COG0438 279 VFVLPSL--SEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGD--VEELADALEQLLEDPELREELGEAAR 354 (381)
T ss_pred EEEeccc--cccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCC--HHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 9999998 7999999999999999999999999999998877788777666 89999999999999888888887666
Q ss_pred HHHHHhcCHHHHHHHHHHHHHHHHH
Q 023290 253 ERVKEIFQEHHMAERIAVVLKEVLK 277 (284)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (284)
+.+...|+|+.++..+.+++.....
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 355 ERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 6676889999999999999987764
|
|
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.7e-21 Score=162.06 Aligned_cols=214 Identities=15% Similarity=0.098 Sum_probs=159.4
Q ss_pred cCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccc
Q 023290 14 LPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSV 93 (284)
Q Consensus 14 ~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~ 93 (284)
.+.+|.+++.+... +.+ .+..++++++||++.+.+.... .+.+++++++.++++++|+.
T Consensus 134 ~~~~d~ii~~~~~~-------~~~---~~~~~i~vi~n~v~~~~~~~~~-----------~~~~~~~~~~~~~i~~~gg~ 192 (357)
T PRK00726 134 ARFAKKVATAFPGA-------FPE---FFKPKAVVTGNPVREEILALAA-----------PPARLAGREGKPTLLVVGGS 192 (357)
T ss_pred HHHhchheECchhh-------hhc---cCCCCEEEECCCCChHhhcccc-----------hhhhccCCCCCeEEEEECCc
Confidence 45677777766522 111 5678999999999987654211 12345666677777888887
Q ss_pred cccccHHHHH-HHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhcc
Q 023290 94 SRGKGQDLFL-HSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAID 172 (284)
Q Consensus 94 ~~~k~~~~~~-~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad 172 (284)
...++...++ +|+.++.. ....++++|.+. .+.+.+..+ +++. |.+.|+.+++..+|+.||
T Consensus 193 ~~~~~~~~~l~~a~~~~~~---------~~~~~~~~G~g~------~~~~~~~~~-~~~~--v~~~g~~~~~~~~~~~~d 254 (357)
T PRK00726 193 QGARVLNEAVPEALALLPE---------ALQVIHQTGKGD------LEEVRAAYA-AGIN--AEVVPFIDDMAAAYAAAD 254 (357)
T ss_pred HhHHHHHHHHHHHHHHhhh---------CcEEEEEcCCCc------HHHHHHHhh-cCCc--EEEeehHhhHHHHHHhCC
Confidence 7777765555 78776632 225567788874 244444445 6663 999999989999999999
Q ss_pred EEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC--------cceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHH
Q 023290 173 VLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG--------TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERR 244 (284)
Q Consensus 173 ~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~--------~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~ 244 (284)
++++++- +++++|||++|+|+|++..++ ..+.+.+..+|+++++.|.++++++++|.++++|++.+
T Consensus 255 ~~i~~~g------~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~ 328 (357)
T PRK00726 255 LVICRAG------ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPERL 328 (357)
T ss_pred EEEECCC------HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHHH
Confidence 9997652 689999999999999987642 12456677889999887655899999999999999999
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 023290 245 LTMGKRGYERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (284)
++|++++++.. +.++.+.+++.+.++++
T Consensus 329 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 329 EAMAEAARALG-KPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHHHHHhcC-CcCHHHHHHHHHHHHhh
Confidence 99999998876 46888888888877654
|
|
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.7e-21 Score=160.98 Aligned_cols=207 Identities=15% Similarity=0.143 Sum_probs=153.6
Q ss_pred cCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccc
Q 023290 14 LPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSV 93 (284)
Q Consensus 14 ~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~ 93 (284)
.+.+|.+++.|+...++ .+..++.+++||++.+.+... .. +++++++++.+++++.|+.
T Consensus 132 ~~~~~~vi~~s~~~~~~----------~~~~~~~~i~n~v~~~~~~~~----------~~-~~~~~~~~~~~~i~~~~g~ 190 (350)
T cd03785 132 ARFADRVALSFPETAKY----------FPKDKAVVTGNPVREEILALD----------RE-RARLGLRPGKPTLLVFGGS 190 (350)
T ss_pred HHhhCEEEEcchhhhhc----------CCCCcEEEECCCCchHHhhhh----------hh-HHhcCCCCCCeEEEEECCc
Confidence 34578888888766553 456789999999998765432 11 6777887778777777776
Q ss_pred cccccHHH-HHHHHHHHHHHHHhhccCCCCeEE-EEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhc
Q 023290 94 SRGKGQDL-FLHSFYESLELIKEKKLEVPSVHA-VIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAI 171 (284)
Q Consensus 94 ~~~k~~~~-~~~a~~~l~~~~~~~~~~~~~~~l-~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~a 171 (284)
...|+... +++++..+.+ +++++ +++|.+ ..+.+++.++++ .++|.+.|+.+++.++|+.|
T Consensus 191 ~~~~~~~~~l~~a~~~l~~---------~~~~~~~i~G~g------~~~~l~~~~~~~--~~~v~~~g~~~~~~~~l~~a 253 (350)
T cd03785 191 QGARAINEAVPEALAELLR---------KRLQVIHQTGKG------DLEEVKKAYEEL--GVNYEVFPFIDDMAAAYAAA 253 (350)
T ss_pred HhHHHHHHHHHHHHHHhhc---------cCeEEEEEcCCc------cHHHHHHHHhcc--CCCeEEeehhhhHHHHHHhc
Confidence 66666654 4577766642 45664 466765 245667777665 46899999999999999999
Q ss_pred cEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC--------cceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHH
Q 023290 172 DVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG--------TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVER 243 (284)
Q Consensus 172 d~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~--------~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~ 243 (284)
|++++++- +++++|||++|+|+|+++.++ ..+.+.+..+|+++++.+.++++++++|..++++++.
T Consensus 254 d~~v~~sg------~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~ 327 (350)
T cd03785 254 DLVISRAG------ASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPER 327 (350)
T ss_pred CEEEECCC------HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHH
Confidence 99997552 578999999999999987543 2355666778999998622299999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCHHHHH
Q 023290 244 RLTMGKRGYERVKEIFQEHHMA 265 (284)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~ 265 (284)
++.|++++++.+. .+..++++
T Consensus 328 ~~~~~~~~~~~~~-~~~~~~i~ 348 (350)
T cd03785 328 LKAMAEAARSLAR-PDAAERIA 348 (350)
T ss_pred HHHHHHHHHhcCC-CCHHHHHH
Confidence 9999999987664 45555544
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-20 Score=159.65 Aligned_cols=205 Identities=14% Similarity=0.121 Sum_probs=147.8
Q ss_pred cCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccc
Q 023290 14 LPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSV 93 (284)
Q Consensus 14 ~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~ 93 (284)
.+.+|.+++.|+...+++ +..+++||++...+.... .++.++++++.++++++|+.
T Consensus 133 ~~~~d~ii~~~~~~~~~~-------------~~~~i~n~v~~~~~~~~~-----------~~~~~~~~~~~~~i~~~gg~ 188 (348)
T TIGR01133 133 SRFAKKVLISFPGAKDHF-------------EAVLVGNPVRQEIRSLPV-----------PRERFGLREGKPTILVLGGS 188 (348)
T ss_pred HHHhCeeEECchhHhhcC-------------CceEEcCCcCHHHhcccc-----------hhhhcCCCCCCeEEEEECCc
Confidence 456788888887665542 247899999876543221 12356777788888899877
Q ss_pred cccccHHH-HHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhcc
Q 023290 94 SRGKGQDL-FLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAID 172 (284)
Q Consensus 94 ~~~k~~~~-~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad 172 (284)
...|++.. +++++..+.. .++++++++++. ..+.+++.++++++.+.+.|. .. ++.++|+.||
T Consensus 189 ~~~~~~~~~l~~a~~~l~~---------~~~~~~~~~g~~-----~~~~l~~~~~~~~l~~~v~~~-~~-~~~~~l~~ad 252 (348)
T TIGR01133 189 QGAKILNELVPKALAKLAE---------KGIQIVHQTGKN-----DLEKVKNVYQELGIEAIVTFI-DE-NMAAAYAAAD 252 (348)
T ss_pred hhHHHHHHHHHHHHHHHhh---------cCcEEEEECCcc-----hHHHHHHHHhhCCceEEecCc-cc-CHHHHHHhCC
Confidence 77777654 4467766543 445665444332 336778888888775555665 33 8999999999
Q ss_pred EEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC-------cceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHH
Q 023290 173 VLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG-------TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRL 245 (284)
Q Consensus 173 ~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~-------~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~ 245 (284)
+++.++ | +++++|||++|+|+|+++.++ ..+++.++.+|++++++|.++++++++|.++++|++.++
T Consensus 253 ~~v~~~-----g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~ 326 (348)
T TIGR01133 253 LVISRA-----G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLE 326 (348)
T ss_pred EEEECC-----C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHH
Confidence 999754 1 689999999999999987654 235777888999998875459999999999999999999
Q ss_pred HHHHHHHHHHHHhcCHHHHH
Q 023290 246 TMGKRGYERVKEIFQEHHMA 265 (284)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~ 265 (284)
+|++++++.+.+ ...+.++
T Consensus 327 ~~~~~~~~~~~~-~~~~~i~ 345 (348)
T TIGR01133 327 AMAEAARKLAKP-DAAKRIA 345 (348)
T ss_pred HHHHHHHhcCCc-cHHHHHH
Confidence 999999876543 4444433
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.1e-19 Score=141.40 Aligned_cols=237 Identities=20% Similarity=0.213 Sum_probs=183.9
Q ss_pred ccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCC-CCCCeEEEE
Q 023290 11 VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGV-RNEDLLFAI 89 (284)
Q Consensus 11 ~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~i~~ 89 (284)
...=..+|.++++|.++.+++++- ++. -...+++.+.+.+..+. ..+- ..+.+.+++
T Consensus 217 ~~~G~~ad~vm~NssWT~nHI~qi----W~~--~~~~iVyPPC~~e~lks----------------~~~te~~r~~~ll~ 274 (465)
T KOG1387|consen 217 QSAGSKADIVMTNSSWTNNHIKQI----WQS--NTCSIVYPPCSTEDLKS----------------KFGTEGERENQLLS 274 (465)
T ss_pred HhccccceEEEecchhhHHHHHHH----hhc--cceeEEcCCCCHHHHHH----------------HhcccCCcceEEEE
Confidence 344457889999999999987663 323 45677887887764332 2222 345688899
Q ss_pred eccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCC-CCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHH
Q 023290 90 INSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDM-NAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAP 166 (284)
Q Consensus 90 ~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~-~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~ 166 (284)
+|++.|.|++. +++.+.....+.+.. ...++++|+++|+-. .++.+..+.++.++.++.++.+|.|.-.+ +++..
T Consensus 275 l~Q~RPEKnH~-~Lql~Al~~~~~pl~-a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~ 352 (465)
T KOG1387|consen 275 LAQFRPEKNHK-ILQLFALYLKNEPLE-ASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVE 352 (465)
T ss_pred EeecCcccccH-HHHHHHHHHhcCchh-hccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEEEecCCHHHHHH
Confidence 99999999999 666555443332221 133789999999843 34556788899999999999999997765 89999
Q ss_pred HHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcc-eeeec---CCceeeecCCCCChHHHHHHHHHHhh-CH
Q 023290 167 YLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTT-EIVVN---GTTGLLHPVGKEGITPLAKNIVKLAT-HV 241 (284)
Q Consensus 167 ~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~-e~v~~---~~~g~~~~~~d~~~~~~~~~i~~l~~-~~ 241 (284)
+++.|.+.+.... .|.||+.+.||||.|+-+|+.+.||.. +++.+ ..+|++.+. .++.+++|.+++. ++
T Consensus 353 lL~~a~iGvh~Mw--NEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~t----~~EYaE~iLkIv~~~~ 426 (465)
T KOG1387|consen 353 LLGKATIGVHTMW--NEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAPT----DEEYAEAILKIVKLNY 426 (465)
T ss_pred Hhccceeehhhhh--hhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecCC----hHHHHHHHHHHHHcCH
Confidence 9999999998886 999999999999999999999988764 44433 357888853 6899999999998 78
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Q 023290 242 ERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKK 278 (284)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (284)
+.+-.+..+||..+. +|+...+.+.+...+.+++.+
T Consensus 427 ~~r~~~r~~AR~s~~-RFsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 427 DERNMMRRNARKSLA-RFGELKFDKDWENPICKLLEE 462 (465)
T ss_pred HHHHHHHHHHHHHHH-HhhHHHHHHhHhHHHHHhhcc
Confidence 888889999988775 699999999999999988865
|
|
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.4e-18 Score=149.89 Aligned_cols=219 Identities=12% Similarity=0.128 Sum_probs=168.8
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEec
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g 91 (284)
..+..++.+|+.+....+.++..+.+. -...++..||.+.- ... ...+ ......+++++
T Consensus 268 ~~~~~~d~iIv~T~~q~~~l~~~~~~~--~~~~~v~~Ip~~~~-~~~-~~~s-----------------~r~~~~~I~v~ 326 (519)
T TIGR03713 268 ESLSRADLIIVDREDIERLLEENYREN--YVEFDISRITPFDT-RLR-LGQS-----------------QQLYETEIGFW 326 (519)
T ss_pred hChhhcCeEEEcCHHHHHHHHHHhhhc--ccCCcceeeCccce-EEe-cChh-----------------hcccceEEEEE
Confidence 456678888888877666655443221 01234566774432 221 1110 01223455677
Q ss_pred --cccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCC-----------------
Q 023290 92 --SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ----------------- 152 (284)
Q Consensus 92 --~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~----------------- 152 (284)
|+ +.|.++.+++++.++.. +.|+++|.+.|.+... ...+.+++.+++++..
T Consensus 327 idrL-~ek~~~~~I~av~~~~~-------~~p~~~L~~~gy~~~~--~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~ 396 (519)
T TIGR03713 327 IDGL-SDEELQQILQQLLQYIL-------KNPDYELKILTYNNDN--DITQLLEDILEQINEEYNQDKNFFSLSEQDENQ 396 (519)
T ss_pred cCCC-ChHHHHHHHHHHHHHHh-------hCCCeEEEEEEecCch--hHHHHHHHHHHHHHhhhchhhhccccchhhhhh
Confidence 99 99999999999999877 4499999999987431 2456666666666555
Q ss_pred ------------CcEEEecccc--CHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCcee
Q 023290 153 ------------DRVHFVNKTL--TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGL 218 (284)
Q Consensus 153 ------------~~v~~~~~~~--~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~ 218 (284)
++|.|.|... ++.+.|+.+.++|.+|. .+|++ +.+||++.|+|+| .-+..++|.++.||+
T Consensus 397 ~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~--~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~~NG~ 470 (519)
T TIGR03713 397 PILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSK--EPDLY-TQISGISAGIPQI---NKVETDYVEHNKNGY 470 (519)
T ss_pred hcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCC--CCChH-HHHHHHHcCCCee---ecCCceeeEcCCCcE
Confidence 6899999875 99999999999999999 99999 9999999999999 556689999999999
Q ss_pred eecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 023290 219 LHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL 272 (284)
Q Consensus 219 ~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (284)
++ +| .++++++|..++.+++.+.++...+++.+. +||.+.+.++|.+++
T Consensus 471 li--~d--~~~l~~al~~~L~~~~~wn~~~~~sy~~~~-~yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 471 II--DD--ISELLKALDYYLDNLKNWNYSLAYSIKLID-DYSSENIIERLNELI 519 (519)
T ss_pred Ee--CC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHH-HhhHHHHHHHHHhhC
Confidence 99 45 999999999999999999999999999885 699999999998753
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.9e-20 Score=133.98 Aligned_cols=133 Identities=26% Similarity=0.347 Sum_probs=96.3
Q ss_pred CeEEEEeccccccccHHHHHH-HHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEecccc
Q 023290 84 DLLFAIINSVSRGKGQDLFLH-SFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL 162 (284)
Q Consensus 84 ~~~i~~~g~~~~~k~~~~~~~-a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~ 162 (284)
-++++++|++.+.|+++.+++ ++.++.+ +.|+++|+|+|.++. .++++ ..++|.++|+++
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~-------~~p~~~l~i~G~~~~-------~l~~~-----~~~~v~~~g~~~ 62 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKE-------KHPDIELIIIGNGPD-------ELKRL-----RRPNVRFHGFVE 62 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHH-------HSTTEEEEEECESS--------HHCCH-----HHCTEEEE-S-H
T ss_pred cccccccccccccccccchhhhHHHHHHH-------HCcCEEEEEEeCCHH-------HHHHh-----cCCCEEEcCCHH
Confidence 467899999999999999999 9988876 348999999999652 24433 124899999988
Q ss_pred CHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhC
Q 023290 163 TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240 (284)
Q Consensus 163 ~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~ 240 (284)
++.++++.||+++.|+.. .++++++++|||++|+|||+++. +..+++.....|+++ .++ +++++++|.++++|
T Consensus 63 e~~~~l~~~dv~l~p~~~-~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~--~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 63 ELPEILAAADVGLIPSRF-NEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-AND--PEELAEAIERLLND 135 (135)
T ss_dssp HHHHHHHC-SEEEE-BSS--SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT---HHHHHHHHHHHHH-
T ss_pred HHHHHHHhCCEEEEEeeC-CCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCC--HHHHHHHHHHHhcC
Confidence 899999999999999863 56899999999999999999998 566776656667777 666 99999999999875
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.2e-18 Score=154.86 Aligned_cols=253 Identities=14% Similarity=0.116 Sum_probs=181.2
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhccc-----------CCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCC
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIK-----------MPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGV 80 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~-----------~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 80 (284)
+.+-.+|.|=+.+...+..+.+.+.+.+|.. ..++.++|.|+|++.+...............++++++
T Consensus 283 ~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~- 361 (934)
T PLN03064 283 RSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFA- 361 (934)
T ss_pred HHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhC-
Confidence 3344677777777777777666555544432 1235678999999888765444333334567788776
Q ss_pred CCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHH----HHHHHHHc----CCC
Q 023290 81 RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESE----LRNYVMQK----KIQ 152 (284)
Q Consensus 81 ~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~----l~~~~~~~----~~~ 152 (284)
++.+|+.++|+++.||+...+.|+.++++..++. ..++.|+.+..+........+. +.+++.+. |-.
T Consensus 362 --g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~---r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~ 436 (934)
T PLN03064 362 --GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEW---RDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTL 436 (934)
T ss_pred --CceEEEEeeccccccCHHHHHHHHHHHHHhCccc---cCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCC
Confidence 5668889999999999999999999988755432 1235555555433322123333 33333332 211
Q ss_pred C--cEEEecc-c--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCC----CEEEcCCCCcceeeecCCceeeecCC
Q 023290 153 D--RVHFVNK-T--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQL----PVLGTAAGGTTEIVVNGTTGLLHPVG 223 (284)
Q Consensus 153 ~--~v~~~~~-~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~----Pvi~~~~~~~~e~v~~~~~g~~~~~~ 223 (284)
+ -|+++.. . +++.++|+.||+++.||. .||++++..|||+|+. ++|.|...|..+.+ +..+++++|.
T Consensus 437 ~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTsl--rDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L--~~~AllVNP~ 512 (934)
T PLN03064 437 TAVPIHHLDRSLDFHALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL--GAGAILVNPW 512 (934)
T ss_pred CcceEEEeccCCCHHHHHHHHHhCCEEEeCcc--ccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh--CCceEEECCC
Confidence 1 1444443 2 789999999999999999 9999999999999944 44448877777766 4468999999
Q ss_pred CCChHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 023290 224 KEGITPLAKNIVKLAT-HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK 277 (284)
Q Consensus 224 d~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (284)
| +++++++|.+.+. ++++++...++.++.+. .+++..+++.+++-+.....
T Consensus 513 D--~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~-~~d~~~Wa~~fl~~L~~~~~ 564 (934)
T PLN03064 513 N--ITEVAASIAQALNMPEEEREKRHRHNFMHVT-THTAQEWAETFVSELNDTVV 564 (934)
T ss_pred C--HHHHHHHHHHHHhCCHHHHHHHHHHHHhhcc-cCCHHHHHHHHHHHHHHHHh
Confidence 9 9999999999998 88899999999999886 59999999998888877654
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.8e-17 Score=140.23 Aligned_cols=201 Identities=16% Similarity=0.156 Sum_probs=139.1
Q ss_pred CcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccc-c
Q 023290 16 LVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSV-S 94 (284)
Q Consensus 16 ~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~-~ 94 (284)
.+|.+++.|....+.+.+ .|.+++++.+++|++........... ....++++++. ++.++++..++. .
T Consensus 141 ~ad~~~~~s~~~~~~l~~-----~G~~~~~I~vign~~~d~~~~~~~~~-----~~~~~~~~~~~-~~~~vl~~~hr~~~ 209 (365)
T TIGR00236 141 IADLHFAPTEQAKDNLLR-----ENVKADSIFVTGNTVIDALLTNVEIA-----YSSPVLSEFGE-DKRYILLTLHRREN 209 (365)
T ss_pred HHHhccCCCHHHHHHHHH-----cCCCcccEEEeCChHHHHHHHHHhhc-----cchhHHHhcCC-CCCEEEEecCchhh
Confidence 468888888888776443 48888899999999743322211110 02445666763 233444333343 2
Q ss_pred ccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHhhcc
Q 023290 95 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAID 172 (284)
Q Consensus 95 ~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~~ad 172 (284)
..|+++.+++++.++.+ ..+++++++.|.+.+. .... +.+.++..++|.+++.. .++..+++.||
T Consensus 210 ~~k~~~~ll~a~~~l~~-------~~~~~~~vi~~~~~~~---~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad 276 (365)
T TIGR00236 210 VGEPLENIFKAIREIVE-------EFEDVQIVYPVHLNPV---VREP---LHKHLGDSKRVHLIEPLEYLDFLNLAANSH 276 (365)
T ss_pred hhhHHHHHHHHHHHHHH-------HCCCCEEEEECCCChH---HHHH---HHHHhCCCCCEEEECCCChHHHHHHHHhCC
Confidence 35889999999988764 2378888888654321 2222 33334556689999875 56788999999
Q ss_pred EEEEcCCCCcCccchhHHHHHhcCCCEEEc-CCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHH
Q 023290 173 VLVQNSQAWGECFGRITIEAMAFQLPVLGT-AAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRG 251 (284)
Q Consensus 173 ~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~-~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~ 251 (284)
+++.+| |..++|||++|+|||++ +.++..+.+.++ .+++++ .| ++++++++.+++++++.+++++.+.
T Consensus 277 ~vv~~S-------g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv~-~d--~~~i~~ai~~ll~~~~~~~~~~~~~ 345 (365)
T TIGR00236 277 LILTDS-------GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLVG-TD--KENITKAAKRLLTDPDEYKKMSNAS 345 (365)
T ss_pred EEEECC-------hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEeC-CC--HHHHHHHHHHHHhChHHHHHhhhcC
Confidence 999776 34579999999999996 667777887655 455664 45 9999999999999998888887654
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.1e-17 Score=138.56 Aligned_cols=222 Identities=17% Similarity=0.176 Sum_probs=147.5
Q ss_pred cCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEE-EEecc
Q 023290 14 LPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLF-AIINS 92 (284)
Q Consensus 14 ~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i-~~~g~ 92 (284)
.+.+|.+++.+....+++.+ .|. ++.++.|++....... .. +...+++++++++.+++ ++.|+
T Consensus 132 ~~~~d~i~~~~~~~~~~~~~-----~g~---~~~~~G~p~~~~~~~~-~~-------~~~~~~~l~~~~~~~~il~~~gs 195 (380)
T PRK00025 132 AKATDHVLALFPFEAAFYDK-----LGV---PVTFVGHPLADAIPLL-PD-------RAAARARLGLDPDARVLALLPGS 195 (380)
T ss_pred HHHHhhheeCCccCHHHHHh-----cCC---CeEEECcCHHHhcccc-cC-------hHHHHHHcCCCCCCCEEEEECCC
Confidence 45678888888877776543 233 2666666654322111 11 35577889987766654 44453
Q ss_pred c-ccc-ccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHc-CCCCcEEEeccccCHHHHHh
Q 023290 93 V-SRG-KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK-KIQDRVHFVNKTLTVAPYLA 169 (284)
Q Consensus 93 ~-~~~-k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~~~~~~~~~~ 169 (284)
- ... +..+.+++++..+.+ +.++++++++|+++ +..+.+++..++. ++. +.+.. .++..+|+
T Consensus 196 r~~~~~~~~~~l~~a~~~l~~-------~~~~~~~ii~~~~~----~~~~~~~~~~~~~~~~~--v~~~~--~~~~~~~~ 260 (380)
T PRK00025 196 RGQEIKRLLPPFLKAAQLLQQ-------RYPDLRFVLPLVNP----KRREQIEEALAEYAGLE--VTLLD--GQKREAMA 260 (380)
T ss_pred CHHHHHHHHHHHHHHHHHHHH-------hCCCeEEEEecCCh----hhHHHHHHHHhhcCCCC--eEEEc--ccHHHHHH
Confidence 2 222 346778888877754 23788999988633 2456677777766 553 55544 58999999
Q ss_pred hccEEEEcCCCCcCccchhHHHHHhcCCCEEEc-----------------CCCCcceeeecCC--ceeeecCCCCChHHH
Q 023290 170 AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT-----------------AAGGTTEIVVNGT--TGLLHPVGKEGITPL 230 (284)
Q Consensus 170 ~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~-----------------~~~~~~e~v~~~~--~g~~~~~~d~~~~~~ 230 (284)
.||+++++| |.+.+|||++|+|+|++ +.+++.+++.++. .+++.+..+ ++++
T Consensus 261 ~aDl~v~~s-------G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~l 331 (380)
T PRK00025 261 AADAALAAS-------GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEAT--PEKL 331 (380)
T ss_pred hCCEEEECc-------cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCC--HHHH
Confidence 999999987 56778999999999976 2334445554443 345555555 9999
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 023290 231 AKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK 277 (284)
Q Consensus 231 ~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (284)
++.+.++++|++.+++|++++.+.... . ....++++.+.+.+++.
T Consensus 332 ~~~i~~ll~~~~~~~~~~~~~~~~~~~-~-~~~a~~~~~~~i~~~~~ 376 (380)
T PRK00025 332 ARALLPLLADGARRQALLEGFTELHQQ-L-RCGADERAAQAVLELLK 376 (380)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHH-h-CCCHHHHHHHHHHHHhh
Confidence 999999999999999999987655443 2 22355666666665554
|
|
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.8e-17 Score=139.33 Aligned_cols=196 Identities=10% Similarity=0.060 Sum_probs=139.7
Q ss_pred ccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEe
Q 023290 11 VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII 90 (284)
Q Consensus 11 ~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~ 90 (284)
...++.+|.+++.|..+.+++++ .|++..++.++++..+....... . ..+..+.++|+
T Consensus 118 ~~~~~~aD~iI~~S~~~~~~l~~-----~g~~~~~i~~~~~~~~~~~~~~~--------------~---~~~~~~~i~ya 175 (333)
T PRK09814 118 IDMLNLADVLIVHSKKMKDRLVE-----EGLTTDKIIVQGIFDYLNDIELV--------------K---TPSFQKKINFA 175 (333)
T ss_pred HHHHHhCCEEEECCHHHHHHHHH-----cCCCcCceEeccccccccccccc--------------c---cccCCceEEEe
Confidence 45677899999999999998654 46766778777655433211100 0 01245688999
Q ss_pred ccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHH
Q 023290 91 NSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYL 168 (284)
Q Consensus 91 g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~ 168 (284)
|++...++ +. . ..++++|+++|.++.. . ...++|.|+|+. +++..+|
T Consensus 176 G~l~k~~~----l~---~----------~~~~~~l~i~G~g~~~-----~---------~~~~~V~f~G~~~~eel~~~l 224 (333)
T PRK09814 176 GNLEKSPF----LK---N----------WSQGIKLTVFGPNPED-----L---------ENSANISYKGWFDPEELPNEL 224 (333)
T ss_pred cChhhchH----HH---h----------cCCCCeEEEECCCccc-----c---------ccCCCeEEecCCCHHHHHHHH
Confidence 99984321 11 1 1167999999988621 1 234689999986 7888888
Q ss_pred hhccEEEEcCCC---------CcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhh
Q 023290 169 AAIDVLVQNSQA---------WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT 239 (284)
Q Consensus 169 ~~ad~~~~ps~~---------~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~ 239 (284)
+. |+.+.+... ..-++|.++.||||+|+|||+++.++..++++++.+|++++ + .++++++|..+
T Consensus 225 ~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~G~~v~--~--~~el~~~l~~~-- 297 (333)
T PRK09814 225 SK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGLGFVVD--S--LEELPEIIDNI-- 297 (333)
T ss_pred hc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCceEEeC--C--HHHHHHHHHhc--
Confidence 87 766654320 02357889999999999999999999999999999999998 3 78999999885
Q ss_pred CHHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 023290 240 HVERRLTMGKRGYERVKEIFQEHHMAER 267 (284)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (284)
+++.+.+|++++++.... +..-.++++
T Consensus 298 ~~~~~~~m~~n~~~~~~~-~~~g~~~~~ 324 (333)
T PRK09814 298 TEEEYQEMVENVKKISKL-LRNGYFTKK 324 (333)
T ss_pred CHHHHHHHHHHHHHHHHH-HhcchhHHH
Confidence 457788999999987654 444444443
|
|
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.7e-17 Score=140.32 Aligned_cols=214 Identities=19% Similarity=0.159 Sum_probs=148.9
Q ss_pred cCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCC-ccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecc
Q 023290 14 LPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGN-SKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 92 (284)
Q Consensus 14 ~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~ 92 (284)
.+.+|.+++.+....+++.+ .|.+.+++.+++|++ |...+...... ....++.++++++.+++++.|+
T Consensus 139 ~~~ad~~~~~s~~~~~~l~~-----~G~~~~kI~vign~v~d~~~~~~~~~~------~~~~~~~~~~~~~~~vlv~~~r 207 (363)
T cd03786 139 DKLSDLHFAPTEEARRNLLQ-----EGEPPERIFVVGNTMIDALLRLLELAK------KELILELLGLLPKKYILVTLHR 207 (363)
T ss_pred HHHhhhccCCCHHHHHHHHH-----cCCCcccEEEECchHHHHHHHHHHhhc------cchhhhhcccCCCCEEEEEeCC
Confidence 35678888888888776543 588889999999996 33222111110 1223457788777777778888
Q ss_pred ccc---cccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCC-CCcEEEeccc--cCHHH
Q 023290 93 VSR---GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKI-QDRVHFVNKT--LTVAP 166 (284)
Q Consensus 93 ~~~---~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~-~~~v~~~~~~--~~~~~ 166 (284)
... .|+++.+++++..+.. .++.+++.|.+. ....+++.+.+++. .++|.|++.. .++..
T Consensus 208 ~~~~~~~k~~~~l~~al~~l~~---------~~~~vi~~~~~~-----~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~ 273 (363)
T cd03786 208 VENVDDGEQLEEILEALAELAE---------EDVPVVFPNHPR-----TRPRIREAGLEFLGHHPNVLLISPLGYLYFLL 273 (363)
T ss_pred ccccCChHHHHHHHHHHHHHHh---------cCCEEEEECCCC-----hHHHHHHHHHhhccCCCCEEEECCcCHHHHHH
Confidence 764 7999999999987743 346666666543 56778888777765 5689998764 68899
Q ss_pred HHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC-CcceeeecCCceeeecCC-CCChHHHHHHHHHHhhCHHHH
Q 023290 167 YLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG-GTTEIVVNGTTGLLHPVG-KEGITPLAKNIVKLATHVERR 244 (284)
Q Consensus 167 ~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~-~~~e~v~~~~~g~~~~~~-d~~~~~~~~~i~~l~~~~~~~ 244 (284)
+|+.||+++.+|. + ...|||++|+|+|+++.. ...+.+++ |..+..+ + +++++++|.++++++..+
T Consensus 274 l~~~ad~~v~~Sg------g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~---g~~~~~~~~--~~~i~~~i~~ll~~~~~~ 341 (363)
T cd03786 274 LLKNADLVLTDSG------G-IQEEASFLGVPVLNLRDRTERPETVES---GTNVLVGTD--PEAILAAIEKLLSDEFAY 341 (363)
T ss_pred HHHcCcEEEEcCc------c-HHhhhhhcCCCEEeeCCCCccchhhhe---eeEEecCCC--HHHHHHHHHHHhcCchhh
Confidence 9999999999883 3 578999999999998743 34455543 4433333 4 899999999999998777
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 023290 245 LTMGKRGYERVKEIFQEHHMAERIAVV 271 (284)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (284)
..|. ...|.-...++++.++
T Consensus 342 ~~~~-------~~~~~~~~a~~~I~~~ 361 (363)
T cd03786 342 SLMS-------INPYGDGNASERIVEI 361 (363)
T ss_pred hcCC-------CCCCCCCHHHHHHHHH
Confidence 6653 2234444445555444
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.9e-16 Score=137.12 Aligned_cols=253 Identities=15% Similarity=0.112 Sum_probs=183.9
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHh----cccCCCeEEEecCCccccchhhhhhh----------------------
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERL----RIKMPDTYVVHLGNSKELMEVAEDNV---------------------- 65 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~----~~~~~~i~vi~~g~~~~~~~~~~~~~---------------------- 65 (284)
..+..++.+-++|...++..+. +...+ .....++.-|-||+|...+.+.....
T Consensus 258 lai~~S~~vngVS~lh~~v~~~-l~~~l~~~~~~~~~~i~gItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~ 336 (601)
T TIGR02094 258 LALRLSRIANGVSKLHGEVSRK-MWQFLYPGYEEEEVPIGYVTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEA 336 (601)
T ss_pred HHHHhCCeeeeecHHHHHHHHH-HHHhhhhhcccccCCccceeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhh
Confidence 3455778888899888875443 33322 22233588899999998776543211
Q ss_pred -----------HHHHHHHHHHH----HhC-------------------CCCCCeEEEEeccccccccHHHHHHHHHHHHH
Q 023290 66 -----------AKRVLREHVRE----SLG-------------------VRNEDLLFAIINSVSRGKGQDLFLHSFYESLE 111 (284)
Q Consensus 66 -----------~~~~~~~~~r~----~~~-------------------~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~ 111 (284)
.+...+..+.+ +.+ ++++.+++++++|+..+||.++++.++.++.+
T Consensus 337 ~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~ 416 (601)
T TIGR02094 337 IDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLAR 416 (601)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHH
Confidence 12222223322 222 45677899999999999999999999988875
Q ss_pred HHHhhccCCCCeEEEEEecCCCCC---hHHHHHHHHHHHHcCCCCcEEEeccc-cCHH-HHHhhccEEEE-cCCCCcCcc
Q 023290 112 LIKEKKLEVPSVHAVIIGSDMNAQ---TKFESELRNYVMQKKIQDRVHFVNKT-LTVA-PYLAAIDVLVQ-NSQAWGECF 185 (284)
Q Consensus 112 ~~~~~~~~~~~~~l~i~G~~~~~~---~~~~~~l~~~~~~~~~~~~v~~~~~~-~~~~-~~~~~ad~~~~-ps~~~~e~~ 185 (284)
.+... ..+++|++.|.+.+.+ .++.+.+..++++...+++|.|+... ..+. .+++.||++++ ||+. .|++
T Consensus 417 i~~~~---~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~-~Eac 492 (601)
T TIGR02094 417 ILNNP---ERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFLENYDINLARYLVSGVDVWLNNPRRP-LEAS 492 (601)
T ss_pred HhhCC---CCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEEcCCCHHHHHHHhhhheeEEeCCCCC-cCCc
Confidence 43211 1479999999987653 22556666666665567788887654 4443 46799999999 8875 8999
Q ss_pred chhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecC------------CCCChHHHHHHHHHHh-----hC-----HHH
Q 023290 186 GRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPV------------GKEGITPLAKNIVKLA-----TH-----VER 243 (284)
Q Consensus 186 ~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~------------~d~~~~~~~~~i~~l~-----~~-----~~~ 243 (284)
|++-+-||..|.+.+++-.|...|.. ++.||+.+.. .| .+++.++|++.+ ++ |..
T Consensus 493 GtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~~~~~~d~~d--a~~l~~~L~~ai~~~yy~~~~~~~p~~ 569 (601)
T TIGR02094 493 GTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYDDEEEQDRLD--AEALYDLLENEVIPLYYDRDEKGIPAD 569 (601)
T ss_pred hHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccccccccccCCC--HHHHHHHHHHHHHHHHhcCCcccCcHH
Confidence 99999999999999999988888887 6789999984 44 899999997655 23 556
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 023290 244 RLTMGKRGYERVKEIFQEHHMAERIAVVL 272 (284)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (284)
+.++.+++.+.....|||+.++++|.+.|
T Consensus 570 W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 570 WVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred HHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 78888888776655799999999999876
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.3e-17 Score=127.76 Aligned_cols=118 Identities=36% Similarity=0.485 Sum_probs=100.0
Q ss_pred EeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc---cCHH
Q 023290 89 IINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT---LTVA 165 (284)
Q Consensus 89 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~---~~~~ 165 (284)
++|++.+.||++.+++++..+.+ +.++++++++|.+.. .......+...+..++|.++++. +++.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~-------~~~~~~~~i~G~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 176 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKE-------RGPDLKLVIAGDGPE-----REYLEELLAALLLLDRVIFLGGLDPEELLA 176 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHH-------hCCCeEEEEEeCCCC-----hHHHHHHHHhcCCcccEEEeCCCCcHHHHH
Confidence 89999999999999999999865 337999999999763 33444435666777899999984 5556
Q ss_pred HHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeee
Q 023290 166 PYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLH 220 (284)
Q Consensus 166 ~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~ 220 (284)
.+++.||++++|+. .|++|++++|||++|+|+|+++.++..+++.++.+|+++
T Consensus 177 ~~~~~~di~l~~~~--~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 177 LLLAAADVFVLPSL--REGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHhhcCCEEEeccc--ccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 66666999999999 899999999999999999999999999999999899864
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.8e-14 Score=128.41 Aligned_cols=192 Identities=15% Similarity=0.144 Sum_probs=150.9
Q ss_pred CCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChH---HHHHHHHHHHHcCCCCcEE
Q 023290 80 VRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTK---FESELRNYVMQKKIQDRVH 156 (284)
Q Consensus 80 ~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~---~~~~l~~~~~~~~~~~~v~ 156 (284)
++++.++++|+.|+..+|+.++++..+.++.+.+.+. ..+++|++.|.+.|.+.. +.+.+.+++++...+++|.
T Consensus 474 ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~---~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVv 550 (778)
T cd04299 474 LDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDP---ERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIV 550 (778)
T ss_pred cCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCC---CCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEE
Confidence 4567789999999999999999999998887655331 146999999998776643 4445555566556677888
Q ss_pred Eeccc-cCHH-HHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCC----------
Q 023290 157 FVNKT-LTVA-PYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGK---------- 224 (284)
Q Consensus 157 ~~~~~-~~~~-~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d---------- 224 (284)
|+... ..+. .+++.||+.++||+.-.|.+|++-+-||..|.+-+++-.|...|.. ++.||+.+....
T Consensus 551 fle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~~~~~~~~~~d~ 629 (778)
T cd04299 551 FLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDGDEYEDDEYQDA 629 (778)
T ss_pred EEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCCccccChhhcch
Confidence 87764 4443 5679999999999877899999999999999999999999999987 889999998822
Q ss_pred CChHHHHHHHHHHhh----C------HHHHHHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHH
Q 023290 225 EGITPLAKNIVKLAT----H------VERRLTMGKRGYERVKEIFQEHHMAERIAV-VLKEV 275 (284)
Q Consensus 225 ~~~~~~~~~i~~l~~----~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 275 (284)
.+.+++.+.|++-+- + |..+.+|.+++...+...|||+.++++|.+ +|..+
T Consensus 630 ~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~p~ 691 (778)
T cd04299 630 EEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFYLPA 691 (778)
T ss_pred hhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhHHHH
Confidence 137777788865332 2 677888988888888789999999999776 55443
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.6e-15 Score=103.04 Aligned_cols=92 Identities=27% Similarity=0.263 Sum_probs=85.2
Q ss_pred EEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHH
Q 023290 173 VLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGY 252 (284)
Q Consensus 173 ~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 252 (284)
+++.|+. ..+++..++|+||||+|+|+.+.+++.+++.++..++.++ + ++++.++|..+++|++++++++++++
T Consensus 1 i~Ln~~~--~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~--~~el~~~i~~ll~~~~~~~~ia~~a~ 74 (92)
T PF13524_consen 1 INLNPSR--SDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--D--PEELAEKIEYLLENPEERRRIAKNAR 74 (92)
T ss_pred CEeeCCC--CCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--C--HHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 3577887 7889999999999999999999999999999998999988 4 99999999999999999999999999
Q ss_pred HHHHHhcCHHHHHHHHHH
Q 023290 253 ERVKEIFQEHHMAERIAV 270 (284)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~ 270 (284)
+.+.++|+|+..++++++
T Consensus 75 ~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 75 ERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHhCCHHHHHHHHHC
Confidence 999999999999998863
|
|
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.62 E-value=8.1e-14 Score=120.40 Aligned_cols=259 Identities=19% Similarity=0.222 Sum_probs=150.0
Q ss_pred cCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhh-----hHHHHHHHHHHHHh-C---CC-CC
Q 023290 14 LPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDN-----VAKRVLREHVRESL-G---VR-NE 83 (284)
Q Consensus 14 ~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~-----~~~~~~~~~~r~~~-~---~~-~~ 83 (284)
...+|.+-++|+.++...+.. ++. ..=.|+|||++.+++...... ..+....+-++..+ | ++ ++
T Consensus 219 A~~AdvFTTVSeITa~Ea~~L----L~r--~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~dfd~d~ 292 (633)
T PF05693_consen 219 AHYADVFTTVSEITAKEAEHL----LKR--KPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYDFDLDK 292 (633)
T ss_dssp HHHSSEEEESSHHHHHHHHHH----HSS----SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---S-GGG
T ss_pred HHhcCeeeehhhhHHHHHHHH----hCC--CCCEEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCCCCccc
Confidence 346888889999888765543 223 234678999998876654221 11222222233332 2 33 45
Q ss_pred CeEEEEeccccc-cccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCC----------------------------
Q 023290 84 DLLFAIINSVSR-GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA---------------------------- 134 (284)
Q Consensus 84 ~~~i~~~g~~~~-~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~---------------------------- 134 (284)
.++|...||.+. .||++.+|+|+.+|...++..+.+..=+.|+++-.....
T Consensus 293 tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~~~~g~ 372 (633)
T PF05693_consen 293 TLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQEKIGK 372 (633)
T ss_dssp EEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 678888999985 799999999999999888765422222334444322110
Q ss_pred ----------------------------------------------ChHHHHHHHHHHHHcCCC----Cc--EEEecc--
Q 023290 135 ----------------------------------------------QTKFESELRNYVMQKKIQ----DR--VHFVNK-- 160 (284)
Q Consensus 135 ----------------------------------------------~~~~~~~l~~~~~~~~~~----~~--v~~~~~-- 160 (284)
.....+.+...+++.++. ++ |+|++.
T Consensus 373 ~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF~P~yL 452 (633)
T PF05693_consen 373 RLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIFHPEYL 452 (633)
T ss_dssp HHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE--S--
T ss_pred HHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEEeeccc
Confidence 000122333334444332 23 555542
Q ss_pred -----c--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeec-----CCcee-eecCCCCC-
Q 023290 161 -----T--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN-----GTTGL-LHPVGKEG- 226 (284)
Q Consensus 161 -----~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~-----~~~g~-~~~~~d~~- 226 (284)
. -++.+++..||+.+.||+ +|++|.+.+|+.++|+|.|+|+..|+..++.+ ...|+ +++-.+.+
T Consensus 453 ~~~dgif~l~Y~dfv~GcdLgvFPSY--YEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV~VvdR~~~n~ 530 (633)
T PF05693_consen 453 SGTDGIFNLDYYDFVRGCDLGVFPSY--YEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGVYVVDRRDKNY 530 (633)
T ss_dssp -TTSSSS-S-HHHHHHHSSEEEE--S--SBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTEEEE-SSSS-H
T ss_pred cCCCCCCCCCHHHHhccCceeeeccc--cccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcEEEEeCCCCCH
Confidence 1 578899999999999999 99999999999999999999999988776653 23455 34444433
Q ss_pred ---hHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhcC
Q 023290 227 ---ITPLAKNIVKLAT-HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSKS 281 (284)
Q Consensus 227 ---~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (284)
++++++.|..+.. +...+..+..++ +.+.+..+|+.+...|.+.+.-++.+..+
T Consensus 531 ~e~v~~la~~l~~f~~~~~rqri~~Rn~a-e~LS~~~dW~~~~~yY~~Ay~~AL~~a~p 588 (633)
T PF05693_consen 531 DESVNQLADFLYKFCQLSRRQRIIQRNRA-ERLSDLADWKNFGKYYEKAYDLALRRAYP 588 (633)
T ss_dssp HHHHHHHHHHHHHHHT--HHHHHHHHHHH-HHHGGGGBHHHHCHHHHHHHHHHHHHHSH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHHHhCCHHHHHHHHHHHHHHHHHhcCc
Confidence 4455555555555 455555555555 45667899999999999999988877543
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.6e-13 Score=108.70 Aligned_cols=175 Identities=19% Similarity=0.210 Sum_probs=142.5
Q ss_pred CCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEec-c
Q 023290 82 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN-K 160 (284)
Q Consensus 82 ~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~-~ 160 (284)
+...+++...++.+..++..+++|+....++.-..+...|.+..+|.|.|+ .++.+.+.++++++. +|.+.- +
T Consensus 253 ~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP-----lkE~Y~~~I~~~~~~-~v~~~tpW 326 (444)
T KOG2941|consen 253 ERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP-----LKEKYSQEIHEKNLQ-HVQVCTPW 326 (444)
T ss_pred CCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc-----hhHHHHHHHHHhccc-ceeeeecc
Confidence 344566677788899999999999987766666666677888888889887 789999999998876 565543 3
Q ss_pred --ccCHHHHHhhccEEEE--cCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHH
Q 023290 161 --TLTVAPYLAAIDVLVQ--NSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVK 236 (284)
Q Consensus 161 --~~~~~~~~~~ad~~~~--ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~ 236 (284)
.+|++.+++.||+.++ +|.+ +-..|++++....||+||++-+...+.|+|+++.||+++.. -+++++.+..
T Consensus 327 L~aEDYP~ll~saDlGVcLHtSSS-GLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~D----s~eLa~ql~~ 401 (444)
T KOG2941|consen 327 LEAEDYPKLLASADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFED----SEELAEQLQM 401 (444)
T ss_pred cccccchhHhhccccceEeeecCc-ccCcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEecc----HHHHHHHHHH
Confidence 3899999999999775 3432 44578999999999999999999999999999999999984 7899999999
Q ss_pred Hhh----CHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 023290 237 LAT----HVERRLTMGKRGYERVKEIFQEHHMAERIA 269 (284)
Q Consensus 237 l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (284)
+.+ +.+...++.+++++.. ...|+..-++..
T Consensus 402 lf~~fp~~a~~l~~lkkn~~e~~--e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 402 LFKNFPDNADELNQLKKNLREEQ--ELRWDESWERTA 436 (444)
T ss_pred HHhcCCCCHHHHHHHHHhhHHHH--hhhHHHHHHHhh
Confidence 998 8889999998888863 466766555443
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.2e-13 Score=117.09 Aligned_cols=250 Identities=18% Similarity=0.129 Sum_probs=158.0
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhccc--CC-----------CeEEEecCCccccchhhhhhhHHHHHHHHHHHHh
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIK--MP-----------DTYVVHLGNSKELMEVAEDNVAKRVLREHVRESL 78 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~--~~-----------~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~ 78 (284)
+.+-.+|.+-+.+...++.+...+.+.+|.. .. ++.+.|-|+|++.+...............+++++
T Consensus 193 ~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~ 272 (474)
T PF00982_consen 193 RGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKF 272 (474)
T ss_dssp HHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHHHHT
T ss_pred HHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhc
Confidence 4444677777788877777766565655432 12 2677888999987765444333333456777877
Q ss_pred CCCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChH----HHHHHHHHHHH----cC
Q 023290 79 GVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTK----FESELRNYVMQ----KK 150 (284)
Q Consensus 79 ~~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~----~~~~l~~~~~~----~~ 150 (284)
+ .+..+|+.+.|++..||+..-+.|+.++.+..++.. .++.|+-++.......+ +..++.+++.+ +|
T Consensus 273 ~--~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~---~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g 347 (474)
T PF00982_consen 273 K--GKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYR---GKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYG 347 (474)
T ss_dssp T--T-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGT---TTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-
T ss_pred C--CCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCcc---CcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcc
Confidence 5 335778899999999999999999999999888753 67888888875444333 34444444443 33
Q ss_pred CCC--cEEEecc-c--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCC----EEEcCCCCcceeeecCCceeeec
Q 023290 151 IQD--RVHFVNK-T--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLP----VLGTAAGGTTEIVVNGTTGLLHP 221 (284)
Q Consensus 151 ~~~--~v~~~~~-~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~P----vi~~~~~~~~e~v~~~~~g~~~~ 221 (284)
-.+ -|.++.. . +++.++|+.||+++.+|. .+|+.++..|+.+|..+ +|.|...|..+.+.+ .+++++
T Consensus 348 ~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTsl--rDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~--~al~VN 423 (474)
T PF00982_consen 348 TPDWTPIIYIYRSLSFEELLALYRAADVALVTSL--RDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSE--AALLVN 423 (474)
T ss_dssp BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--S--SBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-TT--S-EEE-
T ss_pred cCCceeEEEEecCCCHHHHHHHHHhhhhEEecch--hhccCCcceEEEEEecCCCCceEeeccCCHHHHcCC--ccEEEC
Confidence 222 2555554 2 789999999999999999 99999999999999665 667777777777633 359999
Q ss_pred CCCCChHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 023290 222 VGKEGITPLAKNIVKLAT-HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 222 ~~d~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (284)
|.| ++++|++|.+.+. .+++++...+..++.+. .++....++.+++-++
T Consensus 424 P~d--~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~-~~~~~~W~~~~l~~L~ 473 (474)
T PF00982_consen 424 PWD--IEEVADAIHEALTMPPEERKERHARLREYVR-EHDVQWWAESFLRDLK 473 (474)
T ss_dssp TT---HHHHHHHHHHHHT--HHHHHHHHHHHHHHHH-HT-HHHHHHHHHHHHH
T ss_pred CCC--hHHHHHHHHHHHcCCHHHHHHHHHHHHHHhH-hCCHHHHHHHHHHHhh
Confidence 999 9999999999999 56677777777777775 5898888888877664
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.2e-13 Score=118.12 Aligned_cols=212 Identities=14% Similarity=0.068 Sum_probs=136.3
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEE-ec
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI-IN 91 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~-~g 91 (284)
..+.+|.+++.+....+++.+ .| .+..++.|++-.......+. +...|+++|++++.++|++ .|
T Consensus 135 l~~~~d~v~~~~~~e~~~~~~-----~g---~~~~~vGnPv~~~~~~~~~~-------~~~~r~~lgl~~~~~~Ilvl~G 199 (385)
T TIGR00215 135 IEKATDFLLAILPFEKAFYQK-----KN---VPCRFVGHPLLDAIPLYKPD-------RKSAREKLGIDHNGETLALLPG 199 (385)
T ss_pred HHHHHhHhhccCCCcHHHHHh-----cC---CCEEEECCchhhhccccCCC-------HHHHHHHcCCCCCCCEEEEECC
Confidence 345788888888888777543 22 24667788774332211011 3556788999877766654 44
Q ss_pred -cccc-cccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHh
Q 023290 92 -SVSR-GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA 169 (284)
Q Consensus 92 -~~~~-~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~ 169 (284)
|..+ .|++..+++++..+.+ ..+++++++.+.+.. ....+++..+.++....|.+.+. ++..+|+
T Consensus 200 SR~aei~k~~~~ll~a~~~l~~-------~~p~~~~vi~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~--~~~~~l~ 266 (385)
T TIGR00215 200 SRGSEVEKLFPLFLKAAQLLEQ-------QEPDLRRVLPVVNFK----RRLQFEQIKAEYGPDLQLHLIDG--DARKAMF 266 (385)
T ss_pred CCHHHHHHhHHHHHHHHHHHHH-------hCCCeEEEEEeCCch----hHHHHHHHHHHhCCCCcEEEECc--hHHHHHH
Confidence 4444 5788888888887755 337888877654321 34556666666655556666543 6778999
Q ss_pred hccEEEEcCCCCcCccchhHHHHHhcCCCEEEcC-CCC----------------cceeeecCCceeeecCCCCChHHHHH
Q 023290 170 AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA-AGG----------------TTEIVVNGTTGLLHPVGKEGITPLAK 232 (284)
Q Consensus 170 ~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~-~~~----------------~~e~v~~~~~g~~~~~~d~~~~~~~~ 232 (284)
.||++|++| |.+.+|+|++|+|+|... ... +..++.+......+..++.+++.+++
T Consensus 267 aADl~V~~S-------Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~ 339 (385)
T TIGR00215 267 AADAALLAS-------GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAI 339 (385)
T ss_pred hCCEEeecC-------CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHH
Confidence 999999998 556679999999999762 111 12222222222222223345999999
Q ss_pred HHHHHhhCH----HHHHHHHHHHHHHHHHhcC
Q 023290 233 NIVKLATHV----ERRLTMGKRGYERVKEIFQ 260 (284)
Q Consensus 233 ~i~~l~~~~----~~~~~~~~~~~~~~~~~~~ 260 (284)
.+.++++|+ +.++++.+...+ +++...
T Consensus 340 ~~~~ll~~~~~~~~~~~~~~~~~~~-~~~~l~ 370 (385)
T TIGR00215 340 ALLLLLENGLKAYKEMHRERQFFEE-LRQRIY 370 (385)
T ss_pred HHHHHhcCCcccHHHHHHHHHHHHH-HHHHhc
Confidence 999999999 888777766554 434444
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.3e-13 Score=113.64 Aligned_cols=251 Identities=11% Similarity=0.046 Sum_probs=178.8
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccC------------CCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhC
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKM------------PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLG 79 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~------------~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~ 79 (284)
+.+-.+|.+=+.+...++.+.+-+.+.+|... -++.+.|.|+|++.+........ ......++++++
T Consensus 175 ~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~~~-~~~~~~lr~~~~ 253 (474)
T PRK10117 175 EQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAGPL-PPKLAQLKAELK 253 (474)
T ss_pred HHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhchH-HHHHHHHHHHcC
Confidence 33445666667777666666554444333221 13567899999988765433222 222466777765
Q ss_pred CCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChH----HHHHHHHHHHHc----CC
Q 023290 80 VRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTK----FESELRNYVMQK----KI 151 (284)
Q Consensus 80 ~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~----~~~~l~~~~~~~----~~ 151 (284)
++.+|+.+.|++..||+..=+.|+.++++..++.. .++.|+.+......... +..++.+++.+. +-
T Consensus 254 ---~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~---gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~ 327 (474)
T PRK10117 254 ---NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHH---GKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQ 327 (474)
T ss_pred ---CCeEEEEecccccccCHHHHHHHHHHHHHhChhhc---CCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCC
Confidence 45677789999999999999999999998877753 67888877765433322 334444444432 22
Q ss_pred CC--cEEEeccc---cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCC-----CEEEcCCCCcceeeecCCceeeec
Q 023290 152 QD--RVHFVNKT---LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQL-----PVLGTAAGGTTEIVVNGTTGLLHP 221 (284)
Q Consensus 152 ~~--~v~~~~~~---~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~-----Pvi~~~~~~~~e~v~~~~~g~~~~ 221 (284)
.+ -|.++... +++..+|+.||+++.++. .+|+.++..|+.+|-. ++|.|...|..+.+. .+++++
T Consensus 328 ~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTpl--RDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L~---~AllVN 402 (474)
T PRK10117 328 LGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVN 402 (474)
T ss_pred CCceeEEEecCCCCHHHHHHHHHhccEEEeccc--ccccccccchheeeecCCCCccEEEecccchHHHhC---CCeEEC
Confidence 22 25554432 788899999999999999 9999999999999965 377787777777663 389999
Q ss_pred CCCCChHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 023290 222 VGKEGITPLAKNIVKLAT-HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK 277 (284)
Q Consensus 222 ~~d~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (284)
|.| +++++++|.+.+. .++++++..+..++.+. .++....++.+++-+..+..
T Consensus 403 P~d--~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~-~~dv~~W~~~fL~~L~~~~~ 456 (474)
T PRK10117 403 PYD--RDEVAAALDRALTMPLAERISRHAEMLDVIV-KNDINHWQECFISDLKQIVP 456 (474)
T ss_pred CCC--HHHHHHHHHHHHcCCHHHHHHHHHHHHHHhh-hCCHHHHHHHHHHHHHHhhh
Confidence 999 9999999999999 56777777777777775 58999999999988877643
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.3e-13 Score=113.92 Aligned_cols=189 Identities=13% Similarity=0.129 Sum_probs=134.6
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecc
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 92 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~ 92 (284)
.....+++|+.+....+-+++. ++ +..++.++|-|+-.. +.... ....-++.++.
T Consensus 236 ~~~~~~~iIv~T~~q~~di~~r----~~-~~~~~~~ip~g~i~~-~~~~~-------------------r~~~~~l~~t~ 290 (438)
T TIGR02919 236 NETRNKKIIIPNKNEYEKIKEL----LD-NEYQEQISQLGYLYP-FKKDN-------------------KYRKQALILTN 290 (438)
T ss_pred CccccCeEEeCCHHHHHHHHHH----hC-cccCceEEEEEEEEe-ecccc-------------------CCcccEEEECC
Confidence 4477888888887655544433 33 245677788776522 11000 11222334451
Q ss_pred ccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEecccc-CHHHHHhhc
Q 023290 93 VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL-TVAPYLAAI 171 (284)
Q Consensus 93 ~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~-~~~~~~~~a 171 (284)
+..++++..+.+.+ |+++|.| |.+.. ..+.|.++ .++ ++.+.+.|... ++.++|..|
T Consensus 291 -------s~~I~~i~~Lv~~l-------Pd~~f~I-ga~te----~s~kL~~L-~~y--~nvvly~~~~~~~l~~ly~~~ 348 (438)
T TIGR02919 291 -------SDQIEHLEEIVQAL-------PDYHFHI-AALTE----MSSKLMSL-DKY--DNVKLYPNITTQKIQELYQTC 348 (438)
T ss_pred -------HHHHHHHHHHHHhC-------CCcEEEE-EecCc----ccHHHHHH-Hhc--CCcEEECCcChHHHHHHHHhc
Confidence 88889999888754 9999999 76542 34677777 555 44455555454 899999999
Q ss_pred cEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC-CcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHH
Q 023290 172 DVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG-GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKR 250 (284)
Q Consensus 172 d~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~-~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~ 250 (284)
|+++..+. .|++++++.||+..|+||++.+.. +..+++.+ |.+++.++ +++|+++|..++.+++..++....
T Consensus 349 dlyLdin~--~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~--~~~m~~~i~~lL~d~~~~~~~~~~ 421 (438)
T TIGR02919 349 DIYLDINH--GNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNE--VDQLISKLKDLLNDPNQFRELLEQ 421 (438)
T ss_pred cEEEEccc--cccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCC--HHHHHHHHHHHhcCHHHHHHHHHH
Confidence 99999999 999999999999999999999865 45566655 78999998 999999999999999776665444
Q ss_pred HHHHH
Q 023290 251 GYERV 255 (284)
Q Consensus 251 ~~~~~ 255 (284)
-++.+
T Consensus 422 q~~~a 426 (438)
T TIGR02919 422 QREHA 426 (438)
T ss_pred HHHHh
Confidence 44333
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.5e-11 Score=113.68 Aligned_cols=255 Identities=10% Similarity=0.044 Sum_probs=179.2
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccC---------------CCeEEEecCCccccchhhhhhhHHHHHHHHHHH
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKM---------------PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRE 76 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~---------------~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~ 76 (284)
+.+-.+|.+=+.+...++.+.+-+.+.+|... -++.+.|-|+|+..+..............++++
T Consensus 253 ~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~ 332 (854)
T PLN02205 253 RALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIK 332 (854)
T ss_pred HHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHH
Confidence 34446777777777777777665555555432 135678999998877654443333333466777
Q ss_pred HhCCCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChH----HHHHHHHHHHH----
Q 023290 77 SLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTK----FESELRNYVMQ---- 148 (284)
Q Consensus 77 ~~~~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~----~~~~l~~~~~~---- 148 (284)
+++- +++.+|+-+.|++..||+..=+.|+.+++++.++.. .++.|+.+......... +..++.+.+.+
T Consensus 333 ~~~~-~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~---gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~ 408 (854)
T PLN02205 333 QFCD-QDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQ---GKVVLVQIANPARGKGKDVKEVQAETHSTVKRINET 408 (854)
T ss_pred Hhcc-CCCEEEEEccCcccccCHHHHHHHHHHHHHhCcccc---CCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhh
Confidence 7652 246678889999999999999999999988776542 56778877765443322 33344444443
Q ss_pred cCCCC--cEEEeccc---cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCC-------------------CEEEcCC
Q 023290 149 KKIQD--RVHFVNKT---LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQL-------------------PVLGTAA 204 (284)
Q Consensus 149 ~~~~~--~v~~~~~~---~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~-------------------Pvi~~~~ 204 (284)
+|-.+ -|+++... +++.++|+.||+++.++. .+|+.++..|+.+|.. .+|.|..
T Consensus 409 fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~l--RDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEf 486 (854)
T PLN02205 409 FGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAV--RDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEF 486 (854)
T ss_pred cCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccc--cccccccchheeEEccCccccccccccccccCCCCceEeeec
Confidence 22222 25665432 789999999999999999 9999999999999854 2556665
Q ss_pred CCcceeeecCCceeeecCCCCChHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Q 023290 205 GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKK 278 (284)
Q Consensus 205 ~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (284)
.|....+. .+++++|.| +++++++|.+.+. .+++++...++.++++. .++...+++.++.-++.+.++
T Consensus 487 aGaa~~L~---~Ai~VNP~d--~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~-~~d~~~W~~~fl~~l~~~~~~ 555 (854)
T PLN02205 487 IGCSPSLS---GAIRVNPWN--IDAVADAMDSALEMAEPEKQLRHEKHYRYVS-THDVGYWARSFLQDLERTCRD 555 (854)
T ss_pred cchhHHhC---cCeEECCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh-hCCHHHHHHHHHHHHHHHHHH
Confidence 55555442 379999999 9999999999999 55666666667777775 589999999988888777543
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.1e-11 Score=101.56 Aligned_cols=250 Identities=15% Similarity=0.107 Sum_probs=175.9
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhc-------------ccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHh
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLR-------------IKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESL 78 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~-------------~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~ 78 (284)
..+-.+|-+=+.+...+..+...+.+..+ ....++..+|-|+|+..+..............++++.+
T Consensus 199 ~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~ 278 (486)
T COG0380 199 EGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAEL 278 (486)
T ss_pred HHhhcCCeeEecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHh
Confidence 33445666666777666666654444332 12245778899999987765443222212235566665
Q ss_pred CCCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChH----HHHHHHHHHHH----cC
Q 023290 79 GVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTK----FESELRNYVMQ----KK 150 (284)
Q Consensus 79 ~~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~----~~~~l~~~~~~----~~ 150 (284)
+ .+..+|+.+.|++.-||+..=+.|+.+++...++.. .++.++.++.......+ +...+...+.+ +|
T Consensus 279 ~--~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~---~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG 353 (486)
T COG0380 279 G--RNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWR---GKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFG 353 (486)
T ss_pred c--CCceEEEEehhcccccCcHHHHHHHHHHHHhChhhh---CceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcC
Confidence 5 236777789999999999999999999998888753 68888888876655544 23333333333 22
Q ss_pred CCC--cEEEeccc---cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhc----CCCEEEcCCCCcceeeecCCceeeec
Q 023290 151 IQD--RVHFVNKT---LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAF----QLPVLGTAAGGTTEIVVNGTTGLLHP 221 (284)
Q Consensus 151 ~~~--~v~~~~~~---~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~----G~Pvi~~~~~~~~e~v~~~~~g~~~~ 221 (284)
..+ -|.++... +++.++|..||+++.++. .+|+.++..|+.+| +-|.|.|...|....+.+ .++++
T Consensus 354 ~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtpl--rDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~---AliVN 428 (486)
T COG0380 354 SLSWTPVHYLHRDLDRNELLALYRAADVMLVTPL--RDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD---ALIVN 428 (486)
T ss_pred CCCcceeEEEeccCCHHHHHHHHhhhceeeeccc--cccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc---CEeEC
Confidence 211 25555432 788999999999999999 89999999999998 346777776666665533 79999
Q ss_pred CCCCChHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 023290 222 VGKEGITPLAKNIVKLAT-HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 274 (284)
Q Consensus 222 ~~d~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (284)
|.| .++++++|...+. +++++++.-+..++.+. .++...++..+++-+..
T Consensus 429 P~d--~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~-~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 429 PWD--TKEVADAIKRALTMSLEERKERHEKLLKQVL-THDVARWANSFLDDLAQ 479 (486)
T ss_pred CCC--hHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHh
Confidence 999 9999999999998 66777776677777665 58888888887776654
|
|
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.4e-11 Score=103.07 Aligned_cols=182 Identities=18% Similarity=0.221 Sum_probs=124.0
Q ss_pred HHHHhCCCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCC-
Q 023290 74 VRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ- 152 (284)
Q Consensus 74 ~r~~~~~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~- 152 (284)
.|+.+|++++.++++++.++ .|-.+..+++|.++++.+ |+.+|++...+.. ..+.+++.+.+.|+.
T Consensus 275 ~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~v-------P~S~L~L~~~~~~----~~~~l~~~~~~~Gv~~ 341 (468)
T PF13844_consen 275 TRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKAV-------PNSRLWLLRFPAS----GEARLRRRFAAHGVDP 341 (468)
T ss_dssp ETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHHS-------TTEEEEEEETSTT----HHHHHHHHHHHTTS-G
T ss_pred CHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHhC-------CCcEEEEeeCCHH----HHHHHHHHHHHcCCCh
Confidence 47899999999888877765 577889999999998855 8899988765331 457888889999985
Q ss_pred CcEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeee-----c-CCceeeecCCC
Q 023290 153 DRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVV-----N-GTTGLLHPVGK 224 (284)
Q Consensus 153 ~~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~-----~-~~~g~~~~~~d 224 (284)
+++.|.+.. ++....|+.+|+++-+.. -+.+.+.+||+.+|+|||+-.-..+..-+. . |-..+++..
T Consensus 342 ~Ri~f~~~~~~~ehl~~~~~~DI~LDT~p---~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~s-- 416 (468)
T PF13844_consen 342 DRIIFSPVAPREEHLRRYQLADICLDTFP---YNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIADS-- 416 (468)
T ss_dssp GGEEEEE---HHHHHHHGGG-SEEE--SS---S--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-SS--
T ss_pred hhEEEcCCCCHHHHHHHhhhCCEEeeCCC---CCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCCC--
Confidence 689998864 556667899999998764 444789999999999999976443333221 1 222333332
Q ss_pred CChHHHHHHHHHHhhCHHHHHHHHHHHHHHHH--HhcCHHHHHHHHHHHHHHH
Q 023290 225 EGITPLAKNIVKLATHVERRLTMGKRGYERVK--EIFQEHHMAERIAVVLKEV 275 (284)
Q Consensus 225 ~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 275 (284)
.+++.+.-..+..|++.++++.++.++... ..|+...+++.+++.|+.+
T Consensus 417 --~~eYv~~Av~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 417 --EEEYVEIAVRLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp --HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 899999999999999999999988887664 3599999999999999875
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.27 E-value=8e-10 Score=92.81 Aligned_cols=195 Identities=17% Similarity=0.161 Sum_probs=126.7
Q ss_pred ccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCC
Q 023290 41 IKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEV 120 (284)
Q Consensus 41 ~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~ 120 (284)
.+.+++.++.|++..++.. .+. ...+..... ++++|+.+|. ..|...+-+++..+...+.
T Consensus 151 ~~~~~~~~tG~Pvr~~~~~-~~~--------~~~~~~~~~--~~~~ilV~GG---S~Ga~~ln~~v~~~~~~l~------ 210 (357)
T COG0707 151 VKPENVVVTGIPVRPEFEE-LPA--------AEVRKDGRL--DKKTILVTGG---SQGAKALNDLVPEALAKLA------ 210 (357)
T ss_pred CCCCceEEecCcccHHhhc-cch--------hhhhhhccC--CCcEEEEECC---cchhHHHHHHHHHHHHHhh------
Confidence 4455688888888887765 221 222222222 4445544443 2344444444444444332
Q ss_pred CCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEE
Q 023290 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 200 (284)
Q Consensus 121 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi 200 (284)
.+++++...+.. ..+.+.....+++. +.+.++.++|..+|+.||++|+=+ .++++.|..++|+|.|
T Consensus 211 ~~~~v~~~~G~~-----~~~~~~~~~~~~~~---~~v~~f~~dm~~~~~~ADLvIsRa------Ga~Ti~E~~a~g~P~I 276 (357)
T COG0707 211 NRIQVIHQTGKN-----DLEELKSAYNELGV---VRVLPFIDDMAALLAAADLVISRA------GALTIAELLALGVPAI 276 (357)
T ss_pred hCeEEEEEcCcc-----hHHHHHHHHhhcCc---EEEeeHHhhHHHHHHhccEEEeCC------cccHHHHHHHhCCCEE
Confidence 246665554432 23455555555543 888888899999999999999544 3689999999999999
Q ss_pred EcCCCCc--------ceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 023290 201 GTAAGGT--------TEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL 272 (284)
Q Consensus 201 ~~~~~~~--------~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (284)
.-..+.. ..++++...|.+++..+.+++.+.+.|.+++++++.+++|.+++++... ...++++.+++
T Consensus 277 liP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~-----p~aa~~i~~~~ 351 (357)
T COG0707 277 LVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGK-----PDAAERIADLL 351 (357)
T ss_pred EeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC-----CCHHHHHHHHH
Confidence 7654432 2345566678888877777999999999999999999999998876443 23344444444
Q ss_pred HH
Q 023290 273 KE 274 (284)
Q Consensus 273 ~~ 274 (284)
..
T Consensus 352 ~~ 353 (357)
T COG0707 352 LA 353 (357)
T ss_pred HH
Confidence 43
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.27 E-value=8.9e-10 Score=91.81 Aligned_cols=229 Identities=15% Similarity=0.129 Sum_probs=151.5
Q ss_pred cccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEE
Q 023290 10 YVKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAI 89 (284)
Q Consensus 10 ~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~ 89 (284)
....++.++.+++.|+..++.+.+ +|.. ++.+..|=- +...... ........+|.+++.+ +.+++.
T Consensus 171 ~~~~~~~i~li~aQse~D~~Rf~~-----LGa~--~v~v~GNlK---fd~~~~~--~~~~~~~~~r~~l~~~--r~v~ia 236 (419)
T COG1519 171 ARLLFKNIDLILAQSEEDAQRFRS-----LGAK--PVVVTGNLK---FDIEPPP--QLAAELAALRRQLGGH--RPVWVA 236 (419)
T ss_pred HHHHHHhcceeeecCHHHHHHHHh-----cCCc--ceEEeccee---ecCCCCh--hhHHHHHHHHHhcCCC--CceEEE
Confidence 345667889999999988877655 4544 466665531 1111111 1111246778887754 556655
Q ss_pred eccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCC-------------CcEE
Q 023290 90 INSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ-------------DRVH 156 (284)
Q Consensus 90 ~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~-------------~~v~ 156 (284)
.++ ....-+.+++++..+.+ ++++..++++-..+ +-...+.+++++.|+. .+|.
T Consensus 237 aST--H~GEeei~l~~~~~l~~-------~~~~~llIlVPRHp----ERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~ 303 (419)
T COG1519 237 AST--HEGEEEIILDAHQALKK-------QFPNLLLILVPRHP----ERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVL 303 (419)
T ss_pred ecC--CCchHHHHHHHHHHHHh-------hCCCceEEEecCCh----hhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEE
Confidence 554 22334557888888877 55899999998865 4567778888887763 1344
Q ss_pred EeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC-C---cceeeecCCceeeecCCCCChHHHHH
Q 023290 157 FVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG-G---TTEIVVNGTTGLLHPVGKEGITPLAK 232 (284)
Q Consensus 157 ~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~-~---~~e~v~~~~~g~~~~~~d~~~~~~~~ 232 (284)
+.+..-+|..+|+.+|+.+..... ..-.|..++|+.++|+|||....- . +.+.+...+.|+.++. .+.+++
T Consensus 304 l~DtmGEL~l~y~~adiAFVGGSl-v~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~----~~~l~~ 378 (419)
T COG1519 304 LGDTMGELGLLYGIADIAFVGGSL-VPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQVED----ADLLAK 378 (419)
T ss_pred EEecHhHHHHHHhhccEEEECCcc-cCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEECC----HHHHHH
Confidence 444446889999999997765432 445578999999999999987533 2 2333334556677664 678888
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 023290 233 NIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 233 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (284)
++..+..|++.+.++++++...+.++-. ..++..+.++
T Consensus 379 ~v~~l~~~~~~r~~~~~~~~~~v~~~~g---al~r~l~~l~ 416 (419)
T COG1519 379 AVELLLADEDKREAYGRAGLEFLAQNRG---ALARTLEALK 416 (419)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHhhH---HHHHHHHHhh
Confidence 8888888999999999999998875322 3444444443
|
|
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.7e-09 Score=92.82 Aligned_cols=187 Identities=13% Similarity=0.206 Sum_probs=137.0
Q ss_pred HHHhCCCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCC-C
Q 023290 75 RESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ-D 153 (284)
Q Consensus 75 r~~~~~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~-~ 153 (284)
|.+.|++++.++++++++ ..|-...+++.+.++.+.. |+-.|++.|+|. +++....++..+++.|+. +
T Consensus 421 R~~lglp~~avVf~c~~n--~~K~~pev~~~wmqIL~~v-------P~Svl~L~~~~~--~~~~~~~l~~la~~~Gv~~e 489 (620)
T COG3914 421 RAQLGLPEDAVVFCCFNN--YFKITPEVFALWMQILSAV-------PNSVLLLKAGGD--DAEINARLRDLAEREGVDSE 489 (620)
T ss_pred hhhcCCCCCeEEEEecCC--cccCCHHHHHHHHHHHHhC-------CCcEEEEecCCC--cHHHHHHHHHHHHHcCCChh
Confidence 678999998888877665 4577888999998887744 888999998863 345889999999999974 6
Q ss_pred cEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcce-----eeec-CCceeeecCCCC
Q 023290 154 RVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTE-----IVVN-GTTGLLHPVGKE 225 (284)
Q Consensus 154 ~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e-----~v~~-~~~g~~~~~~d~ 225 (284)
++.|.++. ++..+.|.-||+++-+.. .+...+.+||+.||+|||+-.-..+.. ++.. |..-++++.
T Consensus 490 RL~f~p~~~~~~h~a~~~iADlvLDTyP---Y~g~TTa~daLwm~vPVlT~~G~~FasR~~~si~~~agi~e~vA~s--- 563 (620)
T COG3914 490 RLRFLPPAPNEDHRARYGIADLVLDTYP---YGGHTTASDALWMGVPVLTRVGEQFASRNGASIATNAGIPELVADS--- 563 (620)
T ss_pred heeecCCCCCHHHHHhhchhheeeeccc---CCCccchHHHHHhcCceeeeccHHHHHhhhHHHHHhcCCchhhcCC---
Confidence 89999985 677888999999997764 344679999999999999853211111 1111 222223332
Q ss_pred ChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHhh
Q 023290 226 GITPLAKNIVKLATHVERRLTMGKRGYERVKE--IFQEHHMAERIAVVLKEVLKKS 279 (284)
Q Consensus 226 ~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 279 (284)
.++..+.-..+-.|...+++....-.+.... -|+.+.+++++..+|.++.++.
T Consensus 564 -~~dYV~~av~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~~y 618 (620)
T COG3914 564 -RADYVEKAVAFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWSEY 618 (620)
T ss_pred -HHHHHHHHHHhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHHhh
Confidence 5677777777777776666665554444433 6999999999999999988753
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.15 E-value=3.4e-09 Score=89.74 Aligned_cols=189 Identities=14% Similarity=0.131 Sum_probs=112.3
Q ss_pred ccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCC
Q 023290 41 IKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEV 120 (284)
Q Consensus 41 ~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~ 120 (284)
++.+++.++.+++..++.... +...++.+++++++++++.+|.- .|...+-+++..+...+.
T Consensus 151 ~~~~k~~~tG~Pvr~~~~~~~---------~~~~~~~~~l~~~~~~iLv~GGS---~Ga~~in~~~~~~l~~l~------ 212 (352)
T PRK12446 151 LPKEKVIYTGSPVREEVLKGN---------REKGLAFLGFSRKKPVITIMGGS---LGAKKINETVREALPELL------ 212 (352)
T ss_pred CCCCCeEEECCcCCccccccc---------chHHHHhcCCCCCCcEEEEECCc---cchHHHHHHHHHHHHhhc------
Confidence 455678888888877654221 23456678887776665555532 233333333333332221
Q ss_pred CCeEEEE-EecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc-cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCC
Q 023290 121 PSVHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLP 198 (284)
Q Consensus 121 ~~~~l~i-~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~-~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~P 198 (284)
.++++++ +|... ....+. .. .++...++. +++..+|..||++|.-+ .++++.|++++|+|
T Consensus 213 ~~~~vv~~~G~~~-----~~~~~~----~~---~~~~~~~f~~~~m~~~~~~adlvIsr~------G~~t~~E~~~~g~P 274 (352)
T PRK12446 213 LKYQIVHLCGKGN-----LDDSLQ----NK---EGYRQFEYVHGELPDILAITDFVISRA------GSNAIFEFLTLQKP 274 (352)
T ss_pred cCcEEEEEeCCch-----HHHHHh----hc---CCcEEecchhhhHHHHHHhCCEEEECC------ChhHHHHHHHcCCC
Confidence 2456554 45321 122121 11 134455776 68999999999999543 37799999999999
Q ss_pred EEEcCCCC---------cceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 023290 199 VLGTAAGG---------TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIA 269 (284)
Q Consensus 199 vi~~~~~~---------~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (284)
.|...... +..++.+...+..+...+.+++.+.+++.+++.|++.+++ ++ ..+....-++++.
T Consensus 275 ~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~~---~~-----~~~~~~~aa~~i~ 346 (352)
T PRK12446 275 MLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYKT---AL-----KKYNGKEAIQTII 346 (352)
T ss_pred EEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHHH---HH-----HHcCCCCHHHHHH
Confidence 99875431 1224444556666665555589999999999988876542 22 1244445555555
Q ss_pred HHHH
Q 023290 270 VVLK 273 (284)
Q Consensus 270 ~~~~ 273 (284)
+++.
T Consensus 347 ~~i~ 350 (352)
T PRK12446 347 DHIS 350 (352)
T ss_pred HHHH
Confidence 5543
|
|
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.11 E-value=9.1e-09 Score=88.45 Aligned_cols=198 Identities=12% Similarity=0.036 Sum_probs=123.9
Q ss_pred cCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCC-CeEEEEecc
Q 023290 14 LPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNE-DLLFAIINS 92 (284)
Q Consensus 14 ~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~i~~~g~ 92 (284)
-+.++.+.+....+.+++.+. |. ++.++.|++-........ . +++++ ..++++.|+
T Consensus 158 ~~~a~~v~~~~~~t~~~l~~~-----g~---k~~~vGnPv~d~l~~~~~-------------~--~l~~~~~~lllLpGS 214 (396)
T TIGR03492 158 SRRCLAVFVRDRLTARDLRRQ-----GV---RASYLGNPMMDGLEPPER-------------K--PLLTGRFRIALLPGS 214 (396)
T ss_pred chhhCEEeCCCHHHHHHHHHC-----CC---eEEEeCcCHHhcCccccc-------------c--ccCCCCCEEEEECCC
Confidence 367777777777777775542 33 688888887444321100 0 33333 345566665
Q ss_pred ccc--cccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCC--------------CcEE
Q 023290 93 VSR--GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ--------------DRVH 156 (284)
Q Consensus 93 ~~~--~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~--------------~~v~ 156 (284)
-.. .+++..+++++..+.+ + +++.+++.-.+.. ..+.+++...+.+.. +++.
T Consensus 215 R~ae~~~~lp~~l~al~~L~~-------~-~~~~~v~~~~~~~----~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 282 (396)
T TIGR03492 215 RPPEAYRNLKLLLRALEALPD-------S-QPFVFLAAIVPSL----SLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLE 282 (396)
T ss_pred CHHHHHccHHHHHHHHHHHhh-------C-CCeEEEEEeCCCC----CHHHHHHHHHhcCceecCCccccchhhccCceE
Confidence 533 4567788888888743 2 5677766542221 235555555544432 1356
Q ss_pred EeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCc---ceeeecC----CceeeecCCCCChHH
Q 023290 157 FVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGT---TEIVVNG----TTGLLHPVGKEGITP 229 (284)
Q Consensus 157 ~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~---~e~v~~~----~~g~~~~~~d~~~~~ 229 (284)
+..+..++..+|+.||++|..| |.+..|++++|+|+|.....+. ..+.+.. ..++.+...+ ++.
T Consensus 283 v~~~~~~~~~~l~~ADlvI~rS-------Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~--~~~ 353 (396)
T TIGR03492 283 VLLGRGAFAEILHWADLGIAMA-------GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKN--PEQ 353 (396)
T ss_pred EEechHhHHHHHHhCCEEEECc-------CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCC--HHH
Confidence 6666678999999999999876 4566999999999998863322 1122220 2334444444 899
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHH
Q 023290 230 LAKNIVKLATHVERRLTMGKRGYERV 255 (284)
Q Consensus 230 ~~~~i~~l~~~~~~~~~~~~~~~~~~ 255 (284)
+++.+..+++|++.+++|.+++++..
T Consensus 354 l~~~l~~ll~d~~~~~~~~~~~~~~l 379 (396)
T TIGR03492 354 AAQVVRQLLADPELLERCRRNGQERM 379 (396)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHhc
Confidence 99999999999998888875444433
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.3e-07 Score=78.34 Aligned_cols=206 Identities=17% Similarity=0.163 Sum_probs=123.1
Q ss_pred ccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCC-eEEEE
Q 023290 11 VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNED-LLFAI 89 (284)
Q Consensus 11 ~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~i~~ 89 (284)
....+.+|.+.+.-....+++.+ +|.+ .+.|.|+.-.+.. ..++ +...|+++|++.+. .+.+.
T Consensus 131 ~~i~~~~D~lLailPFE~~~y~k-----~g~~---~~yVGHpl~d~i~-~~~~-------r~~ar~~l~~~~~~~~lalL 194 (381)
T COG0763 131 VKIAKYVDHLLAILPFEPAFYDK-----FGLP---CTYVGHPLADEIP-LLPD-------REAAREKLGIDADEKTLALL 194 (381)
T ss_pred HHHHHHhhHeeeecCCCHHHHHh-----cCCC---eEEeCChhhhhcc-cccc-------HHHHHHHhCCCCCCCeEEEe
Confidence 34456788888888888887665 3443 6667766543321 1122 46689999988765 44556
Q ss_pred eccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCC-CCcEEEeccccCHHHHH
Q 023290 90 INSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKI-QDRVHFVNKTLTVAPYL 168 (284)
Q Consensus 90 ~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~-~~~v~~~~~~~~~~~~~ 168 (284)
.|+ +...+..++..+.+..+.+++ ++++.++++--... ..+.++....+... ...+.+.+ .+-.+.|
T Consensus 195 PGS--R~sEI~rl~~~f~~a~~~l~~---~~~~~~~vlp~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~a~ 262 (381)
T COG0763 195 PGS--RRSEIRRLLPPFVQAAQELKA---RYPDLKFVLPLVNA-----KYRRIIEEALKWEVAGLSLILID--GEKRKAF 262 (381)
T ss_pred cCC--cHHHHHHHHHHHHHHHHHHHh---hCCCceEEEecCcH-----HHHHHHHHHhhccccCceEEecC--chHHHHH
Confidence 674 333455555555554444444 44899998866542 33444433333222 11233333 3567789
Q ss_pred hhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcC-----------------CCCcceeeecCCce-eeecCCCCChHHH
Q 023290 169 AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA-----------------AGGTTEIVVNGTTG-LLHPVGKEGITPL 230 (284)
Q Consensus 169 ~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~-----------------~~~~~e~v~~~~~g-~~~~~~d~~~~~~ 230 (284)
..||+.+..| |++.+|++.+|+|.|++- ..+.+.++-+.... -++. .+..++.+
T Consensus 263 ~~aD~al~aS-------GT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq-~~~~pe~l 334 (381)
T COG0763 263 AAADAALAAS-------GTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQ-EDCTPENL 334 (381)
T ss_pred HHhhHHHHhc-------cHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHh-hhcCHHHH
Confidence 9999999877 789999999999999861 11222222111000 0111 11238999
Q ss_pred HHHHHHHhhCHHHHHHHHHHHH
Q 023290 231 AKNIVKLATHVERRLTMGKRGY 252 (284)
Q Consensus 231 ~~~i~~l~~~~~~~~~~~~~~~ 252 (284)
++++..++.|...++++.+...
T Consensus 335 a~~l~~ll~~~~~~~~~~~~~~ 356 (381)
T COG0763 335 ARALEELLLNGDRREALKEKFR 356 (381)
T ss_pred HHHHHHHhcChHhHHHHHHHHH
Confidence 9999999999966666655444
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.9e-07 Score=77.67 Aligned_cols=198 Identities=14% Similarity=0.181 Sum_probs=110.2
Q ss_pred hcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCC-CeEEEEecccc--ccccHHHHHHHHHHHHHHHHh
Q 023290 39 LRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNE-DLLFAIINSVS--RGKGQDLFLHSFYESLELIKE 115 (284)
Q Consensus 39 ~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~i~~~g~~~--~~k~~~~~~~a~~~l~~~~~~ 115 (284)
-|.+..+|.++.|..-......... .+..+.+++|++.+ .++++.+-+.. .....+.+.+.+..+.. +.
T Consensus 162 eg~~~~~i~~tG~~~iD~l~~~~~~------~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~-~~- 233 (365)
T TIGR03568 162 MGEDPDRVFNVGSPGLDNILSLDLL------SKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDE-LN- 233 (365)
T ss_pred cCCCCCcEEEECCcHHHHHHhhhcc------CHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHH-hc-
Confidence 3677778888877543322211111 13567788888643 44333333222 22222333333333322 10
Q ss_pred hccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHH
Q 023290 116 KKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAM 193 (284)
Q Consensus 116 ~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eam 193 (284)
.++.+ +.-.+.+......+.++..... .++|.++++. .++..+++.|++++..|. | .+.||.
T Consensus 234 -----~~~~v-i~P~~~p~~~~i~~~i~~~~~~---~~~v~l~~~l~~~~~l~Ll~~a~~vitdSS------g-gi~EA~ 297 (365)
T TIGR03568 234 -----KNYIF-TYPNADAGSRIINEAIEEYVNE---HPNFRLFKSLGQERYLSLLKNADAVIGNSS------S-GIIEAP 297 (365)
T ss_pred -----cCCEE-EEeCCCCCchHHHHHHHHHhcC---CCCEEEECCCChHHHHHHHHhCCEEEEcCh------h-HHHhhh
Confidence 23433 3222222222233444444221 3579999974 789999999999996663 2 338999
Q ss_pred hcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 023290 194 AFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVV 271 (284)
Q Consensus 194 a~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (284)
++|+|+|+- +.-+|.++.+.+.+.+.. | ++++.+++.++ .+++.+..+ ......|......+++.++
T Consensus 298 ~lg~Pvv~l--~~R~e~~~~g~nvl~vg~-~--~~~I~~a~~~~-~~~~~~~~~-----~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 298 SFGVPTINI--GTRQKGRLRADSVIDVDP-D--KEEIVKAIEKL-LDPAFKKSL-----KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred hcCCCEEee--cCCchhhhhcCeEEEeCC-C--HHHHHHHHHHH-hChHHHHHH-----hhCCCCCCCChHHHHHHHh
Confidence 999999954 456677766777777743 4 89999999995 444333222 1122346555666666554
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.80 E-value=5.3e-07 Score=76.15 Aligned_cols=197 Identities=15% Similarity=0.164 Sum_probs=119.3
Q ss_pred CCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCC-eEEEEeccc
Q 023290 15 PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNED-LLFAIINSV 93 (284)
Q Consensus 15 ~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~i~~~g~~ 93 (284)
+.+|.++|.-....+++++. |+ +++.+.|+.-........ +...++.+ ++++. .+.++.|+=
T Consensus 132 ~~~D~ll~ifPFE~~~y~~~-----g~---~~~~VGHPl~d~~~~~~~--------~~~~~~~~-l~~~~~iIaLLPGSR 194 (373)
T PF02684_consen 132 KYVDHLLVIFPFEPEFYKKH-----GV---PVTYVGHPLLDEVKPEPD--------RAEAREKL-LDPDKPIIALLPGSR 194 (373)
T ss_pred HHHhheeECCcccHHHHhcc-----CC---CeEEECCcchhhhccCCC--------HHHHHHhc-CCCCCcEEEEeCCCC
Confidence 56788889988888887763 32 467777775333221111 24445555 55554 455667753
Q ss_pred cc--cccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhc
Q 023290 94 SR--GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAI 171 (284)
Q Consensus 94 ~~--~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~a 171 (284)
.. .+....+++++..+.+ ++|++++++..... ...+.+.+..+..+....+... ..+-.+.|+.|
T Consensus 195 ~~EI~rllP~~l~aa~~l~~-------~~p~l~fvvp~a~~----~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~m~~a 261 (373)
T PF02684_consen 195 KSEIKRLLPIFLEAAKLLKK-------QRPDLQFVVPVAPE----VHEELIEEILAEYPPDVSIVII--EGESYDAMAAA 261 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHH-------hCCCeEEEEecCCH----HHHHHHHHHHHhhCCCCeEEEc--CCchHHHHHhC
Confidence 22 3445666777777665 45899999876542 1333355555554432233322 34777899999
Q ss_pred cEEEEcCCCCcCccchhHHHHHhcCCCEEEcC-CC----------------CcceeeecCCc-eeeecCCCCChHHHHHH
Q 023290 172 DVLVQNSQAWGECFGRITIEAMAFQLPVLGTA-AG----------------GTTEIVVNGTT-GLLHPVGKEGITPLAKN 233 (284)
Q Consensus 172 d~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~-~~----------------~~~e~v~~~~~-g~~~~~~d~~~~~~~~~ 233 (284)
|+.+..| |++.+|++.+|+|.|+.- .. +...++-+... .-++. ++.+++.++++
T Consensus 262 d~al~~S-------GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ-~~~~~~~i~~~ 333 (373)
T PF02684_consen 262 DAALAAS-------GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQ-EDATPENIAAE 333 (373)
T ss_pred cchhhcC-------CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhc-ccCCHHHHHHH
Confidence 9999887 789999999999999751 11 11112111100 00111 12239999999
Q ss_pred HHHHhhCHHHHHHHHH
Q 023290 234 IVKLATHVERRLTMGK 249 (284)
Q Consensus 234 i~~l~~~~~~~~~~~~ 249 (284)
+..+++|++.++....
T Consensus 334 ~~~ll~~~~~~~~~~~ 349 (373)
T PF02684_consen 334 LLELLENPEKRKKQKE 349 (373)
T ss_pred HHHHhcCHHHHHHHHH
Confidence 9999999887544333
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.76 E-value=4.7e-07 Score=78.20 Aligned_cols=114 Identities=15% Similarity=0.151 Sum_probs=78.3
Q ss_pred CCCcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceeeecCCceeeecCCCCC
Q 023290 151 IQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEG 226 (284)
Q Consensus 151 ~~~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v~~~~~g~~~~~~d~~ 226 (284)
+++++.+.++... ..+|..||++|..+- ..++.||+++|+|+|+....+ +...+.+...|..+...+.+
T Consensus 273 ~~~~v~~~~~~p~-~~ll~~~~~~I~hgG------~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~ 345 (392)
T TIGR01426 273 LPPNVEVRQWVPQ-LEILKKADAFITHGG------MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPEEVT 345 (392)
T ss_pred CCCCeEEeCCCCH-HHHHhhCCEEEECCC------chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccccCC
Confidence 4568988888743 588999999996442 358999999999999875443 22334455667777655445
Q ss_pred hHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 023290 227 ITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL 272 (284)
Q Consensus 227 ~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (284)
.++++++|.+++.|++.++++.+ .++.+...-..+..++.+.+++
T Consensus 346 ~~~l~~ai~~~l~~~~~~~~~~~-l~~~~~~~~~~~~aa~~i~~~~ 390 (392)
T TIGR01426 346 AEKLREAVLAVLSDPRYAERLRK-MRAEIREAGGARRAADEIEGFL 390 (392)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHcCCHHHHHHHHHHhh
Confidence 89999999999999876655533 3334444456666665555443
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.70 E-value=1.5e-06 Score=72.80 Aligned_cols=115 Identities=16% Similarity=0.191 Sum_probs=83.5
Q ss_pred cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeec-----CCceeeec-----CCCCChHHHH
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN-----GTTGLLHP-----VGKEGITPLA 231 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~-----~~~g~~~~-----~~d~~~~~~~ 231 (284)
-|+.++.+.|.+.+.||+ +|++|.+..|+-.||+|-|+|+..|+.-+.++ ..-|+++- .-|+++++++
T Consensus 492 lDYeeFVRGCHLGVFPSY--YEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL~ 569 (692)
T KOG3742|consen 492 LDYEEFVRGCHLGVFPSY--YEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLA 569 (692)
T ss_pred CCHHHHhccccccccccc--cCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHHH
Confidence 478889999999999999 99999999999999999999998887655433 22355432 1222477777
Q ss_pred HHHHHHhhCHHHHHHHH-HHHHHHHHHhcCHHHHHHHHHHHHHHHHHhh
Q 023290 232 KNIVKLATHVERRLTMG-KRGYERVKEIFQEHHMAERIAVVLKEVLKKS 279 (284)
Q Consensus 232 ~~i~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (284)
+-+.++.... .|+++. .+.-+.+....+|..+...|.+.=.-++...
T Consensus 570 ~~m~~F~~qs-RRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~laL~r~ 617 (692)
T KOG3742|consen 570 SFMYEFCKQS-RRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLALSRA 617 (692)
T ss_pred HHHHHHHHHH-HHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHHHHhh
Confidence 7777776543 344444 4555667778999999888887766555543
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=1.7e-06 Score=69.79 Aligned_cols=172 Identities=9% Similarity=0.038 Sum_probs=115.1
Q ss_pred CCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc-
Q 023290 83 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT- 161 (284)
Q Consensus 83 ~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~- 161 (284)
++++|+.-.+-++..++..+++++.+... .++++++-=+-+.++..|.+++.+..+++--.+++..+...
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~~---------~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l 215 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQFG---------DNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKL 215 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHhC---------CCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhC
Confidence 46777655566778888888888766532 77877664322224456899999999988655788877653
Q ss_pred --cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcC-CCCcceeeecCCceeeecCCCCChHHHHHHHHHHh
Q 023290 162 --LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA-AGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLA 238 (284)
Q Consensus 162 --~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~-~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~ 238 (284)
+++.++++.||+.+..-.. -+|.|+.++ .+.+|+||+.+. ++...++.+.+ .-++++.++.+...+.+
T Consensus 216 ~f~eYl~lL~~~Dl~~f~~~R-QQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~g-v~Vlf~~d~L~~~~v~e------ 286 (322)
T PRK02797 216 PFDDYLALLRQCDLGYFIFAR-QQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQG-LPVLFTGDDLDEDIVRE------ 286 (322)
T ss_pred CHHHHHHHHHhCCEEEEeech-hhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCC-CeEEecCCcccHHHHHH------
Confidence 7899999999998876542 678885555 899999999875 55555554333 33444544322222222
Q ss_pred hCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Q 023290 239 THVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKK 278 (284)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (284)
..+++....++.+. |+.+.+.+.+.+++..+.++
T Consensus 287 ----~~rql~~~dk~~I~--Ff~pn~~~~W~~~l~~~~g~ 320 (322)
T PRK02797 287 ----AQRQLASVDKNIIA--FFSPNYLQGWRNALAIAAGE 320 (322)
T ss_pred ----HHHHHHhhCcceee--ecCHhHHHHHHHHHHHhhCC
Confidence 22334444445453 99999999999999876654
|
|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.61 E-value=6.3e-06 Score=74.36 Aligned_cols=207 Identities=18% Similarity=0.113 Sum_probs=138.5
Q ss_pred CcccccccchhhHHHHHHHHHHHh-cccCCCeEEEecCCccccchhhhhhh-H---------------------------
Q 023290 16 LVAGAMIDSHVTAEYWKNRTRERL-RIKMPDTYVVHLGNSKELMEVAEDNV-A--------------------------- 66 (284)
Q Consensus 16 ~~~~~i~~s~~~~~~~~~~~~~~~-~~~~~~i~vi~~g~~~~~~~~~~~~~-~--------------------------- 66 (284)
.+..+-.+|.-..+..++.....+ ++.+.++.-+.||+.+..+....-+. .
T Consensus 374 ~S~~vNGVsklH~el~k~~~~~~~~~~~p~~i~nvTNGIt~rrWl~~~n~~L~~~~~~~ig~~W~~~~~~l~~l~~~a~~ 453 (750)
T COG0058 374 GSHSVNGVSKLHSELSKKMWFADFHGLYPEKINNVTNGITPRRWLAPANPGLADLLDEKIGDEWLNDLDILDELLWFADD 453 (750)
T ss_pred hhhhhHhHHHHHHHHHHHHHHHHhcccCccccccccCCcCCchhhhhhhHHHHHHHhhhhhhhhhhhhhhhhHHHHhhhh
Confidence 344444555555555555433333 56678899999999887664321110 0
Q ss_pred ------HHHHHHHHH--------HHhC--CCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEec
Q 023290 67 ------KRVLREHVR--------ESLG--VRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS 130 (284)
Q Consensus 67 ------~~~~~~~~r--------~~~~--~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~ 130 (284)
-...+.+.+ .+.| +.++.+.++++-|+..+|.....+.-+..+...+++. ..|.+.+++.|.
T Consensus 454 ~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d--~~prv~~iFaGK 531 (750)
T COG0058 454 KAFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKED--WVPRVQIIFAGK 531 (750)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcC--CCCceEEEEecc
Confidence 000011111 1122 3467788999999999999888887777777777631 336677788888
Q ss_pred CCCCChHH---HHHHHHHHHHcCCCCcEEEeccc-cCH-HHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC
Q 023290 131 DMNAQTKF---ESELRNYVMQKKIQDRVHFVNKT-LTV-APYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG 205 (284)
Q Consensus 131 ~~~~~~~~---~~~l~~~~~~~~~~~~v~~~~~~-~~~-~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~ 205 (284)
..|.+... ...+...++..+...+|.|++.. -.+ ..++..||+-...|....|..|++-+-+|..|.+-|+|-.|
T Consensus 532 AhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDG 611 (750)
T COG0058 532 AHPADYAAKEIIKLINDVADVINNKLKVVFLPNYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDG 611 (750)
T ss_pred CCCcchHHHHHHHHHHHHHHhhcccceEEEeCCCChhHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeecccc
Confidence 66655322 23333344444445578888864 333 44679999999887777899999999999999999999999
Q ss_pred Ccceeee--cCCceeeecCCC
Q 023290 206 GTTEIVV--NGTTGLLHPVGK 224 (284)
Q Consensus 206 ~~~e~v~--~~~~g~~~~~~d 224 (284)
...|+.+ .+.||+.+-...
T Consensus 612 anvEi~e~vg~~N~~~fG~~~ 632 (750)
T COG0058 612 ANVEIYEHVGGENGWIFGETV 632 (750)
T ss_pred HHHHHHHhcCCCceEEeCCch
Confidence 9999987 789999987754
|
|
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=98.57 E-value=3.9e-06 Score=72.73 Aligned_cols=93 Identities=17% Similarity=0.063 Sum_probs=67.9
Q ss_pred CCCCcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceeeecCCceeeecCCCC
Q 023290 150 KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKE 225 (284)
Q Consensus 150 ~~~~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v~~~~~g~~~~~~d~ 225 (284)
..+++|.+.++. ....+|..||++|.. . ...++.||+++|+|+|+....+ +...+...+.|..++..+.
T Consensus 285 ~~~~~v~~~~~~-p~~~ll~~~d~~I~h-----g-G~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~~ 357 (401)
T cd03784 285 DLPDNVRVVDFV-PHDWLLPRCAAVVHH-----G-GAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPREL 357 (401)
T ss_pred CCCCceEEeCCC-CHHHHhhhhheeeec-----C-CchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCcccC
Confidence 456789999987 577899999999942 2 2579999999999999886554 2344455567777766543
Q ss_pred ChHHHHHHHHHHhhCHHHHHHHHHH
Q 023290 226 GITPLAKNIVKLATHVERRLTMGKR 250 (284)
Q Consensus 226 ~~~~~~~~i~~l~~~~~~~~~~~~~ 250 (284)
+.+++.+++.++++++ .+++..+.
T Consensus 358 ~~~~l~~al~~~l~~~-~~~~~~~~ 381 (401)
T cd03784 358 TAERLAAALRRLLDPP-SRRRAAAL 381 (401)
T ss_pred CHHHHHHHHHHHhCHH-HHHHHHHH
Confidence 4899999999999853 34444433
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.3e-06 Score=71.69 Aligned_cols=99 Identities=14% Similarity=0.186 Sum_probs=72.4
Q ss_pred CeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEE-EEecCCCCChHHHHHHHHHHHHcCCCCcEEEecccc
Q 023290 84 DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAV-IIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL 162 (284)
Q Consensus 84 ~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~-i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~ 162 (284)
+.+++++|..++.+....+++++..+. .++++. ++|.+.+ ..+.+++..+.. .++.+.++++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~----------~~~~i~vv~G~~~~----~~~~l~~~~~~~---~~i~~~~~~~ 233 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ----------INISITLVTGSSNP----NLDELKKFAKEY---PNIILFIDVE 233 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc----------cCceEEEEECCCCc----CHHHHHHHHHhC---CCEEEEeCHH
Confidence 446778888887776677777776531 334433 5666543 346677776653 3799999999
Q ss_pred CHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC
Q 023290 163 TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG 206 (284)
Q Consensus 163 ~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~ 206 (284)
++.++|..||++|.++ |.++.|++++|+|+|+.....
T Consensus 234 ~m~~lm~~aDl~Is~~-------G~T~~E~~a~g~P~i~i~~~~ 270 (279)
T TIGR03590 234 NMAELMNEADLAIGAA-------GSTSWERCCLGLPSLAICLAE 270 (279)
T ss_pred HHHHHHHHCCEEEECC-------chHHHHHHHcCCCEEEEEecc
Confidence 9999999999999743 579999999999999876543
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=98.54 E-value=5.6e-06 Score=70.91 Aligned_cols=223 Identities=13% Similarity=0.177 Sum_probs=109.4
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEec
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g 91 (284)
......|.+++.|....+.+++ .++.+.+++.+...+-....+...... +..+++.++++.++.+|+|+=
T Consensus 130 ~~~~~~d~~~~~s~~~~~~~~~----~f~~~~~~i~~~G~PR~D~l~~~~~~~------~~~i~~~~~~~~~~k~ILyaP 199 (369)
T PF04464_consen 130 RNYRNYDYFIVSSEFEKEIFKK----AFGYPEDKILVTGYPRNDYLFNKSKEN------RNRIKKKLGIDKDKKVILYAP 199 (369)
T ss_dssp HHHTT-SEEEESSHHHHHHHHH----HTT--GGGEEES--GGGHHHHHSTT-H------HHHHHHHTT--SS-EEEEEE-
T ss_pred hhccCCcEEEECCHHHHHHHHH----HhccCcceEEEeCCCeEhHHhccCHHH------HHHHHHHhccCCCCcEEEEee
Confidence 3556778888888877776444 477776666554433222222222211 467888999988888888876
Q ss_pred cccccccH------HHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHH-cCCCCcEEEeccccCH
Q 023290 92 SVSRGKGQ------DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQ-KKIQDRVHFVNKTLTV 164 (284)
Q Consensus 92 ~~~~~k~~------~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~-~~~~~~v~~~~~~~~~ 164 (284)
++...... ...++ +..+. .+. ..++.+++-..+ ........ ....++|.++....++
T Consensus 200 T~R~~~~~~~~~~~~~~~~-~~~l~-~~~-----~~~~~li~k~Hp---------~~~~~~~~~~~~~~~i~~~~~~~~~ 263 (369)
T PF04464_consen 200 TWRDNSSNEYFKFFFSDLD-FEKLN-FLL-----KNNYVLIIKPHP---------NMKKKFKDFKEDNSNIIFVSDNEDI 263 (369)
T ss_dssp ---GGG--GGSS----TT--HHHHH-HHH-----TTTEEEEE--SH---------HHHTT----TT-TTTEEE-TT-S-H
T ss_pred ccccccccccccccccccC-HHHHH-HHh-----CCCcEEEEEeCc---------hhhhchhhhhccCCcEEECCCCCCH
Confidence 54432221 11111 22222 111 178888876652 11111211 3345688888777799
Q ss_pred HHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEc--CCCCcce---e---eecCCceeeecCCCCChHHHHHHHHH
Q 023290 165 APYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT--AAGGTTE---I---VVNGTTGLLHPVGKEGITPLAKNIVK 236 (284)
Q Consensus 165 ~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~--~~~~~~e---~---v~~~~~g~~~~~~d~~~~~~~~~i~~ 236 (284)
.+++..||++|.-. +.++.|++.+++|||.. |.....+ + ..+...|..+. +.+++.++|..
T Consensus 264 ~~ll~~aDiLITDy-------SSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~~----~~~eL~~~i~~ 332 (369)
T PF04464_consen 264 YDLLAAADILITDY-------SSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIVY----NFEELIEAIEN 332 (369)
T ss_dssp HHHHHT-SEEEESS--------THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EES----SHHHHHHHHTT
T ss_pred HHHHHhcCEEEEec-------hhHHHHHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCceeC----CHHHHHHHHHh
Confidence 99999999999433 55999999999999954 4322211 1 11222233333 27999999999
Q ss_pred HhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 023290 237 LATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL 272 (284)
Q Consensus 237 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (284)
++.++....+..++..+..-. +.-...++++.+.+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~-~~Dg~s~eri~~~I 367 (369)
T PF04464_consen 333 IIENPDEYKEKREKFRDKFFK-YNDGNSSERIVNYI 367 (369)
T ss_dssp HHHHHHHTHHHHHHHHHHHST-T--S-HHHHHHHHH
T ss_pred hhhCCHHHHHHHHHHHHHhCC-CCCchHHHHHHHHH
Confidence 887665443333333333322 33335555555544
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.3e-05 Score=65.34 Aligned_cols=204 Identities=17% Similarity=0.196 Sum_probs=129.5
Q ss_pred hcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHH-hCCCCCCeEEEEeccccc-cccHHHHHHHHHHHHHHHHhh
Q 023290 39 LRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRES-LGVRNEDLLFAIINSVSR-GKGQDLFLHSFYESLELIKEK 116 (284)
Q Consensus 39 ~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~i~~~g~~~~-~k~~~~~~~a~~~l~~~~~~~ 116 (284)
-|.+.++|.++.|.+-............ ....... ++...++++++..=|-.. .+++..+++++.++...
T Consensus 163 EG~~~~~IfvtGnt~iDal~~~~~~~~~----~~~~~~~~~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~---- 234 (383)
T COG0381 163 EGVPEKRIFVTGNTVIDALLNTRDRVLE----DSKILAKGLDDKDKKYILVTAHRRENVGEPLEEICEALREIAEE---- 234 (383)
T ss_pred cCCCccceEEeCChHHHHHHHHHhhhcc----chhhHHhhhccccCcEEEEEcchhhcccccHHHHHHHHHHHHHh----
Confidence 4888889999998764322221110000 0111111 444444455544444333 37888888888888773
Q ss_pred ccCCCCeEEEEEecCCCCChHHHHHHHHHH-HHcCCCCcEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHH
Q 023290 117 KLEVPSVHAVIIGSDMNAQTKFESELRNYV-MQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAM 193 (284)
Q Consensus 117 ~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~-~~~~~~~~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eam 193 (284)
++++.++.--... ..++... ..++-.++|+++.+. .++..++..|-+++.-| |...=||-
T Consensus 235 ---~~~~~viyp~H~~-------~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~iltDS-------GgiqEEAp 297 (383)
T COG0381 235 ---YPDVIVIYPVHPR-------PRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFLILTDS-------GGIQEEAP 297 (383)
T ss_pred ---CCCceEEEeCCCC-------hhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceEEEecC-------CchhhhHH
Confidence 3666665543322 3333333 556666689999886 67888899998777555 45777999
Q ss_pred hcCCCEEEcCC-CCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 023290 194 AFQLPVLGTAA-GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL 272 (284)
Q Consensus 194 a~G~Pvi~~~~-~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (284)
.+|+||++-.. ..-+|.++.| +-.++..+ .+.+.+++..++++++.+++|+. +...|.-.+..+++.+++
T Consensus 298 ~lg~Pvl~lR~~TERPE~v~ag-t~~lvg~~---~~~i~~~~~~ll~~~~~~~~m~~-----~~npYgdg~as~rIv~~l 368 (383)
T COG0381 298 SLGKPVLVLRDTTERPEGVEAG-TNILVGTD---EENILDAATELLEDEEFYERMSN-----AKNPYGDGNASERIVEIL 368 (383)
T ss_pred hcCCcEEeeccCCCCccceecC-ceEEeCcc---HHHHHHHHHHHhhChHHHHHHhc-----ccCCCcCcchHHHHHHHH
Confidence 99999998754 3446666443 33455443 79999999999999998888754 334566666777777777
Q ss_pred HHHH
Q 023290 273 KEVL 276 (284)
Q Consensus 273 ~~~~ 276 (284)
....
T Consensus 369 ~~~~ 372 (383)
T COG0381 369 LNYF 372 (383)
T ss_pred HHHh
Confidence 6544
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=98.49 E-value=2.3e-05 Score=69.51 Aligned_cols=209 Identities=10% Similarity=0.090 Sum_probs=119.6
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCC-CeEEEEec
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNE-DLLFAIIN 91 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~i~~~g 91 (284)
.-+.+|.++|.-....+++++. |+ +++.+.|+.-... ....+ +.+.++++|++++ +.+.+..|
T Consensus 358 i~k~vD~ll~IfPFE~~~y~~~-----gv---~v~yVGHPL~d~i-~~~~~-------~~~~r~~lgl~~~~~iIaLLPG 421 (608)
T PRK01021 358 LEKYLDLLLLILPFEQNLFKDS-----PL---RTVYLGHPLVETI-SSFSP-------NLSWKEQLHLPSDKPIVAAFPG 421 (608)
T ss_pred HHHHhhhheecCccCHHHHHhc-----CC---CeEEECCcHHhhc-ccCCC-------HHHHHHHcCCCCCCCEEEEECC
Confidence 3456788899888888887652 33 3667777753331 11111 3567889998645 55667777
Q ss_pred cccc--cccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHh
Q 023290 92 SVSR--GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA 169 (284)
Q Consensus 92 ~~~~--~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~ 169 (284)
+=.. .+..+.+++++. .+.+. ++.++++..... ...+.+++.....+. -.+.+.... +-.++|+
T Consensus 422 SR~~EI~rllPv~l~aa~--~~~l~------~~l~fvvp~a~~----~~~~~i~~~~~~~~~-~~~~ii~~~-~~~~~m~ 487 (608)
T PRK01021 422 SRRGDILRNLTIQVQAFL--ASSLA------STHQLLVSSANP----KYDHLILEVLQQEGC-LHSHIVPSQ-FRYELMR 487 (608)
T ss_pred CCHHHHHHHHHHHHHHHH--HHHhc------cCeEEEEecCch----hhHHHHHHHHhhcCC-CCeEEecCc-chHHHHH
Confidence 5321 234555556654 11222 457776643322 134555555543321 023333221 2368999
Q ss_pred hccEEEEcCCCCcCccchhHHHHHhcCCCEEEc-CCC------------------CcceeeecCC-ceeeec-CCCCChH
Q 023290 170 AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT-AAG------------------GTTEIVVNGT-TGLLHP-VGKEGIT 228 (284)
Q Consensus 170 ~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~-~~~------------------~~~e~v~~~~-~g~~~~-~~d~~~~ 228 (284)
.||+.+..| |++.+|++.+|+|.|+. ... +...++.+.. ---++. ..|.+++
T Consensus 488 aaD~aLaaS-------GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe 560 (608)
T PRK01021 488 ECDCALAKC-------GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPE 560 (608)
T ss_pred hcCeeeecC-------CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHH
Confidence 999999888 88999999999999974 111 1111111110 011221 1123499
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcC
Q 023290 229 PLAKNIVKLATHVERRLTMGKRGYERVKEIFQ 260 (284)
Q Consensus 229 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~ 260 (284)
.+++++ +++.|++.++++.+...+ +++...
T Consensus 561 ~La~~l-~lL~d~~~r~~~~~~l~~-lr~~Lg 590 (608)
T PRK01021 561 EVAAAL-DILKTSQSKEKQKDACRD-LYQAMN 590 (608)
T ss_pred HHHHHH-HHhcCHHHHHHHHHHHHH-HHHHhc
Confidence 999996 888888877777665544 433333
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.46 E-value=4.9e-06 Score=68.73 Aligned_cols=199 Identities=11% Similarity=0.069 Sum_probs=130.6
Q ss_pred CCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCC
Q 023290 43 MPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPS 122 (284)
Q Consensus 43 ~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~ 122 (284)
..+.+.+++++|.+.+.+-+... .-..-+.++|+..+. ..+.+-+.+..=...+. .+
T Consensus 160 ~~~~~~~~~a~d~~~~~~i~~da----------------~~~~dL~~ign~~pD-r~e~~ke~~~~ps~kl~------v~ 216 (373)
T COG4641 160 ARNCYYLPWAVDDSLFHPIPPDA----------------SYDVDLNLIGNPYPD-RVEEIKEFFVEPSFKLM------VD 216 (373)
T ss_pred ccceeccCccCCchhcccCCccc----------------cceeeeEEecCCCcc-HHHHHHHHhhccchhhh------cc
Confidence 44677889999988877655321 122346678876654 12222222221111110 22
Q ss_pred eEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEecc---ccCHHHHHhhccEEEEcCCCC-cC---ccchhHHHHHhc
Q 023290 123 VHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK---TLTVAPYLAAIDVLVQNSQAW-GE---CFGRITIEAMAF 195 (284)
Q Consensus 123 ~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~---~~~~~~~~~~ad~~~~ps~~~-~e---~~~~~~~Eama~ 195 (284)
-++...|...+.. .+.. --.+++...|+ ...+...+..-|+.+.-++.. .+ ++.+.+.|+++|
T Consensus 217 rr~~~~g~~y~~~-----~~~~-----~~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc 286 (373)
T COG4641 217 RRFYVLGPRYPDD-----IWGR-----TWEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGC 286 (373)
T ss_pred ceeeecCCccchh-----hhcc-----cccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhc
Confidence 4455566542211 0000 01123333333 356778888888887654421 11 136789999999
Q ss_pred CCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 023290 196 QLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEV 275 (284)
Q Consensus 196 G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (284)
|.|.++....+...++.+|..-++... ..++.+.+..++..++.++++++.+++.+...|+.+.-..++.+.+.++
T Consensus 287 ~~~liT~~~~~~e~~f~pgk~~iv~~d----~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~sI 362 (373)
T COG4641 287 GGFLITDYWKDLEKFFKPGKDIIVYQD----SKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYEERIFKLLNEIASI 362 (373)
T ss_pred CCccccccHHHHHHhcCCchheEEecC----HHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHH
Confidence 999999999999999988876555543 7999999999999999999999999999999999999998888888775
Q ss_pred HHh
Q 023290 276 LKK 278 (284)
Q Consensus 276 ~~~ 278 (284)
...
T Consensus 363 ~~r 365 (373)
T COG4641 363 NIR 365 (373)
T ss_pred HHh
Confidence 443
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.7e-05 Score=72.52 Aligned_cols=151 Identities=16% Similarity=0.116 Sum_probs=108.9
Q ss_pred CCCCCeEEEEeccccccccHHH-HHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHH---HHHH----HcCC
Q 023290 80 VRNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELR---NYVM----QKKI 151 (284)
Q Consensus 80 ~~~~~~~i~~~g~~~~~k~~~~-~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~---~~~~----~~~~ 151 (284)
++++.+.++++-|+...|...+ ++..+.++.+..........+.++++.|...|.....+.-++ ..++ +..+
T Consensus 539 ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v 618 (815)
T PRK14986 539 VNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQI 618 (815)
T ss_pred cCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhh
Confidence 5677788899999999999888 777777765544332112246888888887776543333332 2233 2233
Q ss_pred CC--cEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeec--CCceeeecCCCC
Q 023290 152 QD--RVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN--GTTGLLHPVGKE 225 (284)
Q Consensus 152 ~~--~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~--~~~g~~~~~~d~ 225 (284)
.+ +|.|+... .-...++..||+....|....|..|++-+-+|..|.+.+++-.|...|+.++ +.||+.+-..
T Consensus 619 ~~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG~~-- 696 (815)
T PRK14986 619 GDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNT-- 696 (815)
T ss_pred cCceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeCCC--
Confidence 44 68888764 3334578999999988777789999999999999999999999999999876 7899998765
Q ss_pred ChHHHHHH
Q 023290 226 GITPLAKN 233 (284)
Q Consensus 226 ~~~~~~~~ 233 (284)
.+++.+.
T Consensus 697 -~~ev~~~ 703 (815)
T PRK14986 697 -AEEVEAL 703 (815)
T ss_pred -HHHHHHH
Confidence 4555543
|
|
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.2e-06 Score=71.80 Aligned_cols=119 Identities=17% Similarity=0.198 Sum_probs=83.2
Q ss_pred CCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc-
Q 023290 83 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT- 161 (284)
Q Consensus 83 ~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~- 161 (284)
.+.+++++|..... .++++++.+ ++..++++|....+ ...++|.+.++.
T Consensus 192 ~~~iLv~~gg~~~~----~~~~~l~~~-----------~~~~~~v~g~~~~~---------------~~~~ni~~~~~~~ 241 (318)
T PF13528_consen 192 EPKILVYFGGGGPG----DLIEALKAL-----------PDYQFIVFGPNAAD---------------PRPGNIHVRPFST 241 (318)
T ss_pred CCEEEEEeCCCcHH----HHHHHHHhC-----------CCCeEEEEcCCccc---------------ccCCCEEEeecCh
Confidence 45677788876544 455555543 67888888764200 114689999976
Q ss_pred cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcce------eeecCCceeeecCCCCChHHHHHHHH
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTE------IVVNGTTGLLHPVGKEGITPLAKNIV 235 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e------~v~~~~~g~~~~~~d~~~~~~~~~i~ 235 (284)
.++.++|..||++|..+ .-.++.||+++|+|+|+-...+..| .++..+.|..++..+.+++.+.+.|.
T Consensus 242 ~~~~~~m~~ad~vIs~~------G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~ 315 (318)
T PF13528_consen 242 PDFAELMAAADLVISKG------GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLE 315 (318)
T ss_pred HHHHHHHHhCCEEEECC------CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHh
Confidence 89999999999999544 2347999999999999988755433 34445566676665555888888886
Q ss_pred HH
Q 023290 236 KL 237 (284)
Q Consensus 236 ~l 237 (284)
++
T Consensus 316 ~~ 317 (318)
T PF13528_consen 316 RL 317 (318)
T ss_pred cC
Confidence 53
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.42 E-value=6.4e-06 Score=69.62 Aligned_cols=198 Identities=15% Similarity=0.139 Sum_probs=103.6
Q ss_pred hcccCCCeEEEecCCccccchhhhhhhHHHHHHHHH-HHHh-CCCCCCeEEEEeccccc---cccHHHHHHHHHHHHHHH
Q 023290 39 LRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHV-RESL-GVRNEDLLFAIINSVSR---GKGQDLFLHSFYESLELI 113 (284)
Q Consensus 39 ~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~-r~~~-~~~~~~~~i~~~g~~~~---~k~~~~~~~a~~~l~~~~ 113 (284)
.|.++++|.++.|..-.......+... ..+ ...+ +..+++++++..=+... ......+.+++..+.+.
T Consensus 140 ~G~~~~rI~~vG~~~~D~l~~~~~~~~------~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~- 212 (346)
T PF02350_consen 140 EGEPPERIFVVGNPGIDALLQNKEEIE------EKYKNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER- 212 (346)
T ss_dssp TT--GGGEEE---HHHHHHHHHHHTTC------C-HHHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-
T ss_pred cCCCCCeEEEEChHHHHHHHHhHHHHh------hhhhhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-
Confidence 588889999998765333222111110 001 1111 11334454444322222 23345666666665541
Q ss_pred HhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHH-
Q 023290 114 KEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITI- 190 (284)
Q Consensus 114 ~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~- 190 (284)
+++.+++.....+ .....+.+...++ +++.++.+. .++..+++.|+++|.-| | .+.
T Consensus 213 -------~~~~vi~~~hn~p---~~~~~i~~~l~~~---~~v~~~~~l~~~~~l~ll~~a~~vvgdS-------s-GI~e 271 (346)
T PF02350_consen 213 -------QNVPVIFPLHNNP---RGSDIIIEKLKKY---DNVRLIEPLGYEEYLSLLKNADLVVGDS-------S-GIQE 271 (346)
T ss_dssp -------TTEEEEEE--S-H---HHHHHHHHHHTT----TTEEEE----HHHHHHHHHHESEEEESS-------H-HHHH
T ss_pred -------CCCcEEEEecCCc---hHHHHHHHHhccc---CCEEEECCCCHHHHHHHHhcceEEEEcC-------c-cHHH
Confidence 5788887765322 2455565555554 389888875 78899999999999665 4 566
Q ss_pred HHHhcCCCEEEcC-CCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 023290 191 EAMAFQLPVLGTA-AGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIA 269 (284)
Q Consensus 191 Eama~G~Pvi~~~-~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (284)
||.++|+|+|.-. .+.-.+.+..+.+-+ +. .+ .+++.++|.+++.+++.+.++.. ....|.-...++++.
T Consensus 272 Ea~~lg~P~v~iR~~geRqe~r~~~~nvl-v~-~~--~~~I~~ai~~~l~~~~~~~~~~~-----~~npYgdG~as~rI~ 342 (346)
T PF02350_consen 272 EAPSLGKPVVNIRDSGERQEGRERGSNVL-VG-TD--PEAIIQAIEKALSDKDFYRKLKN-----RPNPYGDGNASERIV 342 (346)
T ss_dssp HGGGGT--EEECSSS-S-HHHHHTTSEEE-ET-SS--HHHHHHHHHHHHH-HHHHHHHHC-----S--TT-SS-HHHHHH
T ss_pred HHHHhCCeEEEecCCCCCHHHHhhcceEE-eC-CC--HHHHHHHHHHHHhChHHHHhhcc-----CCCCCCCCcHHHHHH
Confidence 9999999999884 444455554454444 66 44 89999999999988554444321 223466666677777
Q ss_pred HHHH
Q 023290 270 VVLK 273 (284)
Q Consensus 270 ~~~~ 273 (284)
++++
T Consensus 343 ~~Lk 346 (346)
T PF02350_consen 343 EILK 346 (346)
T ss_dssp HHHH
T ss_pred HhhC
Confidence 6653
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.6e-05 Score=64.05 Aligned_cols=171 Identities=9% Similarity=0.048 Sum_probs=109.2
Q ss_pred CCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEE-EecCCCCChHHHHHHHHHHHHcCCCCcEEEecc
Q 023290 82 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 160 (284)
Q Consensus 82 ~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i-~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~ 160 (284)
+++.+|+.-.+-++..++..+++++.+... .++++++ .|.|. ....|.+++.+..+++--.+++..+..
T Consensus 183 ~~~ltILvGNSgd~sNnHieaL~~L~~~~~---------~~~kIivPLsYg~-~n~~Yi~~V~~~~~~lF~~~~~~iL~e 252 (360)
T PF07429_consen 183 KGKLTILVGNSGDPSNNHIEALEALKQQFG---------DDVKIIVPLSYGA-NNQAYIQQVIQAGKELFGAENFQILTE 252 (360)
T ss_pred CCceEEEEcCCCCCCccHHHHHHHHHHhcC---------CCeEEEEECCCCC-chHHHHHHHHHHHHHhcCccceeEhhh
Confidence 356677655566677888888877765321 5677655 33332 234588888888888755557776653
Q ss_pred -c--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHH
Q 023290 161 -T--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKL 237 (284)
Q Consensus 161 -~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l 237 (284)
. +|+.++++.||+.++.... -.|.|+.++ .+.+|+||+.+....+-..+.+...-+++..++.+...++++=.++
T Consensus 253 ~mpf~eYl~lL~~cDl~if~~~R-QQgiGnI~l-Ll~~G~~v~L~~~np~~~~l~~~~ipVlf~~d~L~~~~v~ea~rql 330 (360)
T PF07429_consen 253 FMPFDEYLALLSRCDLGIFNHNR-QQGIGNICL-LLQLGKKVFLSRDNPFWQDLKEQGIPVLFYGDELDEALVREAQRQL 330 (360)
T ss_pred hCCHHHHHHHHHhCCEEEEeech-hhhHhHHHH-HHHcCCeEEEecCChHHHHHHhCCCeEEeccccCCHHHHHHHHHHH
Confidence 2 7999999999999988763 677875544 9999999998876666555555444455554444455555554444
Q ss_pred hhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 023290 238 ATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVL 276 (284)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (284)
.. .-++.+ .|....+.+.+.+.+.-+.
T Consensus 331 ~~----------~dk~~i--aFf~pny~~~w~~~l~~~~ 357 (360)
T PF07429_consen 331 AN----------VDKQQI--AFFAPNYLQGWRQALRLAA 357 (360)
T ss_pred hh----------Ccccce--eeeCCchHHHHHHHHHHHh
Confidence 33 111112 2666677777777665443
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.4e-07 Score=70.09 Aligned_cols=93 Identities=18% Similarity=0.204 Sum_probs=65.4
Q ss_pred CcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC--------cceeeecCCceeeecCCC
Q 023290 153 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG--------TTEIVVNGTTGLLHPVGK 224 (284)
Q Consensus 153 ~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~--------~~e~v~~~~~g~~~~~~d 224 (284)
.+|.++++.+++.++|..||++|.-+ .+.++.|++++|+|.|.-.... ....+.+...|..+...+
T Consensus 55 ~~v~~~~~~~~m~~~m~~aDlvIs~a------G~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~ 128 (167)
T PF04101_consen 55 PNVKVFGFVDNMAELMAAADLVISHA------GAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESE 128 (167)
T ss_dssp CCCEEECSSSSHHHHHHHHSEEEECS-------CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC
T ss_pred CcEEEEechhhHHHHHHHcCEEEeCC------CccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCccc
Confidence 58999999989999999999999533 3579999999999998766555 222333444566655554
Q ss_pred CChHHHHHHHHHHhhCHHHHHHHHHHH
Q 023290 225 EGITPLAKNIVKLATHVERRLTMGKRG 251 (284)
Q Consensus 225 ~~~~~~~~~i~~l~~~~~~~~~~~~~~ 251 (284)
.+++.+.++|..++.++..+..+.+++
T Consensus 129 ~~~~~L~~~i~~l~~~~~~~~~~~~~~ 155 (167)
T PF04101_consen 129 LNPEELAEAIEELLSDPEKLKEMAKAA 155 (167)
T ss_dssp -SCCCHHHHHHCHCCCHH-SHHHCCCH
T ss_pred CCHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 447889999999999988766665543
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.31 E-value=4.2e-05 Score=66.11 Aligned_cols=157 Identities=16% Similarity=0.142 Sum_probs=100.5
Q ss_pred CCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEecccc
Q 023290 83 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL 162 (284)
Q Consensus 83 ~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~ 162 (284)
.+++.+..|+.... ..+++.+..+.. + -+.++++...+. + . ..-++++++...++.
T Consensus 237 ~~~vyvslGt~~~~---~~l~~~~~~a~~---~-----l~~~vi~~~~~~-~----------~-~~~~~p~n~~v~~~~- 292 (406)
T COG1819 237 RPIVYVSLGTVGNA---VELLAIVLEALA---D-----LDVRVIVSLGGA-R----------D-TLVNVPDNVIVADYV- 292 (406)
T ss_pred CCeEEEEcCCcccH---HHHHHHHHHHHh---c-----CCcEEEEecccc-c----------c-ccccCCCceEEecCC-
Confidence 44555566766543 334433333322 1 567777776541 1 0 123567788888887
Q ss_pred CHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----CcceeeecCCceeeecCCCCChHHHHHHHHHHh
Q 023290 163 TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLA 238 (284)
Q Consensus 163 ~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~ 238 (284)
...+++..||++|+.. ..+++.||+..|+|+|+-..+ .+.+.+++-..|...+....+.+.++++|.+++
T Consensus 293 p~~~~l~~ad~vI~hG------G~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL 366 (406)
T COG1819 293 PQLELLPRADAVIHHG------GAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRAAVNEVL 366 (406)
T ss_pred CHHHHhhhcCEEEecC------CcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHHHHHHHh
Confidence 4556999999999644 245999999999999987544 344566677788888854445999999999999
Q ss_pred hCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 023290 239 THVERRLTMGKRGYERVKEIFQEHHMAERIAV 270 (284)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (284)
.++..++... +.++.+.+.-.....++.+.+
T Consensus 367 ~~~~~~~~~~-~~~~~~~~~~g~~~~a~~le~ 397 (406)
T COG1819 367 ADDSYRRAAE-RLAEEFKEEDGPAKAADLLEE 397 (406)
T ss_pred cCHHHHHHHH-HHHHHhhhcccHHHHHHHHHH
Confidence 9987665543 334444444443334444433
|
|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=98.31 E-value=3.4e-05 Score=70.68 Aligned_cols=212 Identities=15% Similarity=0.096 Sum_probs=136.8
Q ss_pred ccccccchhhHHHHHHHHHH-HhcccCCCeEEEecCCccccchhhh-------------------------------h--
Q 023290 18 AGAMIDSHVTAEYWKNRTRE-RLRIKMPDTYVVHLGNSKELMEVAE-------------------------------D-- 63 (284)
Q Consensus 18 ~~~i~~s~~~~~~~~~~~~~-~~~~~~~~i~vi~~g~~~~~~~~~~-------------------------------~-- 63 (284)
..+-.+|.-..+.+++.+.. .+...+.++.-+.||+.+..+-... +
T Consensus 419 ~~vNGVS~lH~ei~k~~~~~df~~l~P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~ 498 (797)
T cd04300 419 HSVNGVAALHSELLKETVFKDFYELYPEKFNNKTNGITPRRWLLQANPGLSALITETIGDDWVTDLDQLKKLEPFADDPA 498 (797)
T ss_pred cchhhhHHHHHHHHHHhhHHHHHhhCCCccCCcCCCCCcchhhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhcCCCHH
Confidence 33444455555555555233 4456678888899999886554100 0
Q ss_pred ---hh------HHHHHHHHHHHHhC--CCCCCeEEEEeccccccccHHH-HHHHHHHHHHHHHhhccCCCCeEEEEEecC
Q 023290 64 ---NV------AKRVLREHVRESLG--VRNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEKKLEVPSVHAVIIGSD 131 (284)
Q Consensus 64 ---~~------~~~~~~~~~r~~~~--~~~~~~~i~~~g~~~~~k~~~~-~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~ 131 (284)
.. .|.....-+++..| ++++.+..+++-|+...|...+ ++..+.++.+..........+..+++.|..
T Consensus 499 f~~~l~~~K~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKA 578 (797)
T cd04300 499 FLKEFRAIKQANKERLAAYIKKTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKA 578 (797)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccC
Confidence 00 01111222333444 4677888999999999999888 777776665544332112235788888887
Q ss_pred CCCChHHHHHHH---HHHH----HcCCCC--cEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEE
Q 023290 132 MNAQTKFESELR---NYVM----QKKIQD--RVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 200 (284)
Q Consensus 132 ~~~~~~~~~~l~---~~~~----~~~~~~--~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi 200 (284)
.|.....+.-++ ..++ +..+.+ +|.|+... .-...++..||+....|....|..|+.-+-+|..|.+.+
T Consensus 579 aP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltl 658 (797)
T cd04300 579 APGYYMAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTI 658 (797)
T ss_pred CCCcHHHHHHHHHHHHHHHHhccChhcCCceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceee
Confidence 666543222222 2222 112344 68888764 334457899999998877668999999999999999999
Q ss_pred EcCCCCcceeeec--CCceeeecCCCCChHHHHH
Q 023290 201 GTAAGGTTEIVVN--GTTGLLHPVGKEGITPLAK 232 (284)
Q Consensus 201 ~~~~~~~~e~v~~--~~~g~~~~~~d~~~~~~~~ 232 (284)
+|-.|...|+.++ +.|++++-.. .+++.+
T Consensus 659 gtlDGanvEi~e~vG~eN~fiFG~~---~~ev~~ 689 (797)
T cd04300 659 GTLDGANVEIAEEVGEENIFIFGLT---AEEVEA 689 (797)
T ss_pred ecccchhHHHHHHhCcCcEEEeCCC---HHHHHH
Confidence 9999999998876 7889988765 455443
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=3.1e-05 Score=68.85 Aligned_cols=96 Identities=16% Similarity=0.044 Sum_probs=69.3
Q ss_pred CCCCcEEEeccccCHHHHH--hhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----CcceeeecCCceeeecCC
Q 023290 150 KIQDRVHFVNKTLTVAPYL--AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVNGTTGLLHPVG 223 (284)
Q Consensus 150 ~~~~~v~~~~~~~~~~~~~--~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~e~v~~~~~g~~~~~~ 223 (284)
+++++|.+.++.. ...++ ..++++|. -|...++.||+.+|+|+|+-... .+...++..+.|..++..
T Consensus 343 ~~p~Nv~i~~w~P-q~~lL~hp~v~~fIt------HGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~ 415 (507)
T PHA03392 343 NLPANVLTQKWFP-QRAVLKHKNVKAFVT------QGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTV 415 (507)
T ss_pred cCCCceEEecCCC-HHHHhcCCCCCEEEe------cCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccC
Confidence 4567999998863 45677 45889984 22356999999999999987543 234444456678877776
Q ss_pred CCChHHHHHHHHHHhhCHHHHHHHHHHHH
Q 023290 224 KEGITPLAKNIVKLATHVERRLTMGKRGY 252 (284)
Q Consensus 224 d~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 252 (284)
+.+.+++.++|.+++.|+..+++..+-+.
T Consensus 416 ~~t~~~l~~ai~~vl~~~~y~~~a~~ls~ 444 (507)
T PHA03392 416 TVSAAQLVLAIVDVIENPKYRKNLKELRH 444 (507)
T ss_pred CcCHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 65689999999999999776655444333
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=98.27 E-value=3.5e-05 Score=70.34 Aligned_cols=156 Identities=17% Similarity=0.173 Sum_probs=110.1
Q ss_pred HHHHhC--CCCCCeEEEEeccccccccHHH-HHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcC
Q 023290 74 VRESLG--VRNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKK 150 (284)
Q Consensus 74 ~r~~~~--~~~~~~~i~~~g~~~~~k~~~~-~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~ 150 (284)
++++.| ++++.+..+++-|+...|...+ ++..+.++.+..........+..+++.|...|.... ...+.+++....
T Consensus 515 i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~-aK~iIklI~~va 593 (794)
T TIGR02093 515 IKEHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHM-AKLIIKLINSVA 593 (794)
T ss_pred HHHhcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHH-HHHHHHHHHHHH
Confidence 344444 4567788889999999999888 777777665544332111236788888887666543 333333333322
Q ss_pred --------CCC--cEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeec--CCc
Q 023290 151 --------IQD--RVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN--GTT 216 (284)
Q Consensus 151 --------~~~--~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~--~~~ 216 (284)
+.+ +|.|+... .-...++..||+....|....|..|+.-+-+|..|.+.+++-.|...|+.++ +.|
T Consensus 594 ~~iN~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN 673 (794)
T TIGR02093 594 EVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAEN 673 (794)
T ss_pred HHhccChhhCCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCccc
Confidence 444 68888764 3344578999999988776689999999999999999999999999998876 788
Q ss_pred eeeecCCCCChHHHHHH
Q 023290 217 GLLHPVGKEGITPLAKN 233 (284)
Q Consensus 217 g~~~~~~d~~~~~~~~~ 233 (284)
++++-.. .+++.+.
T Consensus 674 ~fiFG~~---~~ev~~~ 687 (794)
T TIGR02093 674 IFIFGLT---VEEVEAL 687 (794)
T ss_pred EEEcCCC---HHHHHHH
Confidence 9888765 4555543
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=8.5e-05 Score=67.85 Aligned_cols=155 Identities=15% Similarity=0.107 Sum_probs=108.7
Q ss_pred HHHhC--CCCCCeEEEEeccccccccHHH-HHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHc--
Q 023290 75 RESLG--VRNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK-- 149 (284)
Q Consensus 75 r~~~~--~~~~~~~i~~~g~~~~~k~~~~-~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~-- 149 (284)
+++.| ++++.+.++++-|+...|...+ ++..+.++.+..........+.++++.|...|.....+. +.+++...
T Consensus 518 ~~~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~-iIklI~~va~ 596 (798)
T PRK14985 518 KQRTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKN-IIFAINKVAE 596 (798)
T ss_pred HHHhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHH-HHHHHHHHHH
Confidence 34444 5667788889999999999888 777777665543322112245788888887766543232 22222222
Q ss_pred ------CCCC--cEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeec--CCce
Q 023290 150 ------KIQD--RVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN--GTTG 217 (284)
Q Consensus 150 ------~~~~--~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~--~~~g 217 (284)
.+.+ +|.|+... .-...++..||+....|....|..|+.-+-+|..|.+.+++-.|...|+.++ +.||
T Consensus 597 ~in~Dp~v~~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~ 676 (798)
T PRK14985 597 VINNDPLVGDKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENI 676 (798)
T ss_pred HhcCChhhCCceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcE
Confidence 2333 68888764 3334578999999988776789999999999999999999999999898865 7899
Q ss_pred eeecCCCCChHHHHHH
Q 023290 218 LLHPVGKEGITPLAKN 233 (284)
Q Consensus 218 ~~~~~~d~~~~~~~~~ 233 (284)
+.+-.. .+++.+.
T Consensus 677 f~fG~~---~~ev~~~ 689 (798)
T PRK14985 677 FIFGHT---VEQVKAL 689 (798)
T ss_pred EEeCCC---HHHHHHH
Confidence 998765 4544443
|
|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.0006 Score=61.86 Aligned_cols=155 Identities=14% Similarity=0.130 Sum_probs=92.6
Q ss_pred HHHhC--CCCCCeEEEEeccccccccHHH-HHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHH---HHH-
Q 023290 75 RESLG--VRNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRN---YVM- 147 (284)
Q Consensus 75 r~~~~--~~~~~~~i~~~g~~~~~k~~~~-~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~---~~~- 147 (284)
++..| ++++.+..+++-|+...|...+ ++..+..+.+..........++++++.|...|.+...+.-++. .++
T Consensus 433 ~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~ 512 (713)
T PF00343_consen 433 KKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEV 512 (713)
T ss_dssp HHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHH
Confidence 34444 5677888899999999999777 4555555544333222233568899999877765433333332 222
Q ss_pred ---HcCCCC--cEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeec--CCcee
Q 023290 148 ---QKKIQD--RVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN--GTTGL 218 (284)
Q Consensus 148 ---~~~~~~--~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~--~~~g~ 218 (284)
+..+.+ +|.|+... .-...+++.|||.+..|+...|..|++-+-+|..|.+.+++-.|..-|+.+. ..|.+
T Consensus 513 in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~f 592 (713)
T PF00343_consen 513 INNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIF 592 (713)
T ss_dssp HCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSE
T ss_pred HhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEE
Confidence 123444 68888864 2334578999999988777789999999999999999999999998888754 45677
Q ss_pred eecCCCCChHHHHH
Q 023290 219 LHPVGKEGITPLAK 232 (284)
Q Consensus 219 ~~~~~d~~~~~~~~ 232 (284)
++-.. .+++.+
T Consensus 593 iFG~~---~~ev~~ 603 (713)
T PF00343_consen 593 IFGLT---AEEVEE 603 (713)
T ss_dssp EES-B---HHHHHH
T ss_pred EcCCC---HHHHHH
Confidence 76543 455443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00057 Score=57.20 Aligned_cols=181 Identities=16% Similarity=0.153 Sum_probs=100.9
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEE-ecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEe
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVV-HLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII 90 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi-~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~ 90 (284)
..++.++.+++....-...+++ +|.. -++. ++|++...+-..-.+ ...+.+++|+++++.+++=.
T Consensus 121 Lt~Pla~~i~~P~~~~~~~~~~-----~G~~---~~i~~y~G~~E~ayl~~F~P------d~~vl~~lg~~~~~yIvvR~ 186 (335)
T PF04007_consen 121 LTLPLADVIITPEAIPKEFLKR-----FGAK---NQIRTYNGYKELAYLHPFKP------DPEVLKELGLDDEPYIVVRP 186 (335)
T ss_pred eehhcCCeeECCcccCHHHHHh-----cCCc---CCEEEECCeeeEEeecCCCC------ChhHHHHcCCCCCCEEEEEe
Confidence 3466788777766554443333 3433 2334 677765332211111 26678899987666555433
Q ss_pred ccccc--cccHHH-HHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHH
Q 023290 91 NSVSR--GKGQDL-FLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPY 167 (284)
Q Consensus 91 g~~~~--~k~~~~-~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~ 167 (284)
..+.. .+|... +-+.+..+.+ . .+. ++++..... .....+.+ ++.+.+..-+...+
T Consensus 187 ~~~~A~y~~~~~~i~~~ii~~L~~----~----~~~-vV~ipr~~~--------~~~~~~~~----~~~i~~~~vd~~~L 245 (335)
T PF04007_consen 187 EAWKASYDNGKKSILPEIIEELEK----Y----GRN-VVIIPRYED--------QRELFEKY----GVIIPPEPVDGLDL 245 (335)
T ss_pred ccccCeeecCccchHHHHHHHHHh----h----Cce-EEEecCCcc--------hhhHHhcc----CccccCCCCCHHHH
Confidence 33221 223222 2233333322 1 333 566655321 11222332 25555554567789
Q ss_pred HhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC---CcceeeecCCceeeecCCCCChHHHHHHHHHHh
Q 023290 168 LAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG---GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLA 238 (284)
Q Consensus 168 ~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~---~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~ 238 (284)
+..||++|. +| |+...||..+|+|.|++-.+ +...++. ..|.+....| ++++.+.+....
T Consensus 246 l~~a~l~Ig------~g-gTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~--~~ei~~~v~~~~ 308 (335)
T PF04007_consen 246 LYYADLVIG------GG-GTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTD--PDEIVEYVRKNL 308 (335)
T ss_pred HHhcCEEEe------CC-cHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCC--HHHHHHHHHHhh
Confidence 999999993 33 67889999999999987543 2334442 3488888888 888888665543
|
They are found in archaea and some bacteria and have no known function. |
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00055 Score=60.34 Aligned_cols=241 Identities=15% Similarity=0.161 Sum_probs=151.7
Q ss_pred ccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCc--cccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEE
Q 023290 11 VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNS--KELMEVAEDNVAKRVLREHVRESLGVRNEDLLFA 88 (284)
Q Consensus 11 ~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~--~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~ 88 (284)
.....++|.+|+.+-..---+.+...+++ +..+....|.-... .+...+.. .-.|.+++++++.+++.
T Consensus 694 TtGa~~mDYiITDs~tsPl~~a~~ysEkL-v~lPh~ffi~d~~qk~~~~~dpn~---------kP~r~~y~Lp~d~vvf~ 763 (966)
T KOG4626|consen 694 TTGATFMDYIITDSVTSPLELAQQYSEKL-VYLPHCFFIGDHKQKNQDVLDPNN---------KPTRSQYGLPEDAVVFC 763 (966)
T ss_pred CCCCceeeEEeecccCChHHHHHHHHHHH-hhCCceEEecCcccccccccCCCC---------CCCCCCCCCCCCeEEEe
Confidence 34566788888887765444444333333 22233333322211 01111111 12567899998888876
Q ss_pred EeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCC-CcEEEeccc--cCHH
Q 023290 89 IINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ-DRVHFVNKT--LTVA 165 (284)
Q Consensus 89 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~-~~v~~~~~~--~~~~ 165 (284)
.+..+ .|=-...++.|..+++++ |+-.|++.--+.- -...++..+.+.|++ ++|.|.+-. +|-.
T Consensus 764 ~FNqL--yKidP~~l~~W~~ILk~V-------PnS~LwllrfPa~----ge~rf~ty~~~~Gl~p~riifs~va~k~eHv 830 (966)
T KOG4626|consen 764 NFNQL--YKIDPSTLQMWANILKRV-------PNSVLWLLRFPAV----GEQRFRTYAEQLGLEPDRIIFSPVAAKEEHV 830 (966)
T ss_pred echhh--hcCCHHHHHHHHHHHHhC-------CcceeEEEecccc----chHHHHHHHHHhCCCccceeeccccchHHHH
Confidence 66654 455677888888887755 7777777654321 237888899999985 568777653 4555
Q ss_pred HHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceee-----ecCCceeeecCCCCChHHHHHHHHHHhhC
Q 023290 166 PYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIV-----VNGTTGLLHPVGKEGITPLAKNIVKLATH 240 (284)
Q Consensus 166 ~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v-----~~~~~g~~~~~~d~~~~~~~~~i~~l~~~ 240 (284)
.-.+-+|+++-+.. ..| -.+-+|.+.+|+|+|+-.-.....-| ..-+.|-++-.. -++..+.-.++..|
T Consensus 831 rr~~LaDv~LDTpl--cnG-hTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak~---~eEY~~iaV~Latd 904 (966)
T KOG4626|consen 831 RRGQLADVCLDTPL--CNG-HTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAKN---REEYVQIAVRLATD 904 (966)
T ss_pred HhhhhhhhcccCcC--cCC-cccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhhh---HHHHHHHHHHhhcC
Confidence 66788999997655 332 35678999999999987533222211 112233333332 57888888888888
Q ss_pred HHHHHHHHHHHHHHH--HHhcCHHHHHHHHHHHHHHHHHhhc
Q 023290 241 VERRLTMGKRGYERV--KEIFQEHHMAERIAVVLKEVLKKSK 280 (284)
Q Consensus 241 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (284)
.+..+++..+-+..- ...|+-.+++..++++|.+..++..
T Consensus 905 ~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~y~ 946 (966)
T KOG4626|consen 905 KEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKKYC 946 (966)
T ss_pred HHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHHhc
Confidence 888877766554432 2368899999999999999887643
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00016 Score=60.82 Aligned_cols=80 Identities=13% Similarity=0.177 Sum_probs=57.6
Q ss_pred CCcEEEeccc-cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcce------eeecCCceeeecCCC
Q 023290 152 QDRVHFVNKT-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTE------IVVNGTTGLLHPVGK 224 (284)
Q Consensus 152 ~~~v~~~~~~-~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e------~v~~~~~g~~~~~~d 224 (284)
.+++.+.++. +++..+|..||++|..+- ..++.||+++|+|+|.....+..| .+.+.+.|..++..+
T Consensus 228 ~~~v~~~~~~~~~~~~~l~~ad~vI~~~G------~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~ 301 (321)
T TIGR00661 228 NENVEIRRITTDNFKELIKNAELVITHGG------FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKE 301 (321)
T ss_pred CCCEEEEECChHHHHHHHHhCCEEEECCC------hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhh
Confidence 4588888877 589999999999996542 347999999999999988765433 344556777777665
Q ss_pred CChHHHHHHHHHHhhC
Q 023290 225 EGITPLAKNIVKLATH 240 (284)
Q Consensus 225 ~~~~~~~~~i~~l~~~ 240 (284)
. ++.+++...+.+
T Consensus 302 --~-~~~~~~~~~~~~ 314 (321)
T TIGR00661 302 --L-RLLEAILDIRNM 314 (321)
T ss_pred --H-HHHHHHHhcccc
Confidence 4 445555444443
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00039 Score=58.58 Aligned_cols=92 Identities=13% Similarity=0.004 Sum_probs=57.5
Q ss_pred CCeEEEEeccccc--cccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEecc
Q 023290 83 EDLLFAIINSVSR--GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 160 (284)
Q Consensus 83 ~~~~i~~~g~~~~--~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~ 160 (284)
++.+.++.|+-.. .+-...+++++.++.+ ...++++.|... . +.+++...+. ..+.+.+
T Consensus 167 ~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~---------~~~~~~i~~a~~-----~-~~i~~~~~~~---~~~~~~~- 227 (347)
T PRK14089 167 EGTIAFMPGSRKSEIKRLMPIFKELAKKLEG---------KEKILVVPSFFK-----G-KDLKEIYGDI---SEFEISY- 227 (347)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHhh---------cCcEEEEeCCCc-----H-HHHHHHHhcC---CCcEEec-
Confidence 4566667775432 2334445555555433 236777776642 2 4444444332 1344443
Q ss_pred ccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEc
Q 023290 161 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT 202 (284)
Q Consensus 161 ~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~ 202 (284)
+..++|+.||+++..| |.+.+|++.+|+|.|..
T Consensus 228 --~~~~~m~~aDlal~~S-------GT~TLE~al~g~P~Vv~ 260 (347)
T PRK14089 228 --DTHKALLEAEFAFICS-------GTATLEAALIGTPFVLA 260 (347)
T ss_pred --cHHHHHHhhhHHHhcC-------cHHHHHHHHhCCCEEEE
Confidence 6678999999999877 67888999999999985
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.013 Score=51.02 Aligned_cols=107 Identities=15% Similarity=0.098 Sum_probs=65.7
Q ss_pred HHHHHHHcCCCCcEEEec-c--ccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCC-CCcceeeec-CCc
Q 023290 142 LRNYVMQKKIQDRVHFVN-K--TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA-GGTTEIVVN-GTT 216 (284)
Q Consensus 142 l~~~~~~~~~~~~v~~~~-~--~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~-~~~~e~v~~-~~~ 216 (284)
.++..+.+.-+.+++++. . ..++..+++.||++|..-. .+++=|+++|+|+|+-.. .-...++++ +..
T Consensus 296 ~~~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~Rl-------Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~ 368 (426)
T PRK10017 296 ALNLRQHVSDPARYHVVMDELNDLEMGKILGACELTVGTRL-------HSAIISMNFGTPAIAINYEHKSAGIMQQLGLP 368 (426)
T ss_pred HHHHHHhcccccceeEecCCCChHHHHHHHhhCCEEEEecc-------hHHHHHHHcCCCEEEeeehHHHHHHHHHcCCc
Confidence 344444444334444432 1 2567789999999996554 367779999999997643 222333322 222
Q ss_pred eeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Q 023290 217 GLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERV 255 (284)
Q Consensus 217 g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~ 255 (284)
.++++..+.+.+++.+.+.+++++.+..++....+.+..
T Consensus 369 ~~~~~~~~l~~~~Li~~v~~~~~~r~~~~~~l~~~v~~~ 407 (426)
T PRK10017 369 EMAIDIRHLLDGSLQAMVADTLGQLPALNARLAEAVSRE 407 (426)
T ss_pred cEEechhhCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 344555444478999999999998876655444433333
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.004 Score=57.29 Aligned_cols=192 Identities=16% Similarity=0.066 Sum_probs=127.5
Q ss_pred eEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEE
Q 023290 46 TYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHA 125 (284)
Q Consensus 46 i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l 125 (284)
+..+|.|+|+..+...........-..+++..+ .++.+++.+-++..-||...=+.++.+++.+.++.. ..+.+
T Consensus 241 v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~---~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~---~kVvl 314 (732)
T KOG1050|consen 241 VKALPIGIDVQRFVKLLELPYVGSKGMEIKEPF---KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWI---DKVVL 314 (732)
T ss_pred eeecccccchHHhhccccchhHHHHHHHHhhhc---cCCceEecccccccccCchHHHHHHHHHHHhChhhh---ceEEE
Confidence 455677777766554333222111234444444 356677788899999999988999999888777653 56667
Q ss_pred EEEecCCCCChHHHHHHHHH----HHHc----CC--CCcEEEecc-c--cCHHHHHhhccEEEEcCCCCcCccchhHHHH
Q 023290 126 VIIGSDMNAQTKFESELRNY----VMQK----KI--QDRVHFVNK-T--LTVAPYLAAIDVLVQNSQAWGECFGRITIEA 192 (284)
Q Consensus 126 ~i~G~~~~~~~~~~~~l~~~----~~~~----~~--~~~v~~~~~-~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Ea 192 (284)
+.+..+.....+..++++.. +++. +- ...|.++.. . .++.+++..+|+++..+. .+|..++.+|+
T Consensus 315 iqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~--rdGmnl~~~e~ 392 (732)
T KOG1050|consen 315 IQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSW--RDGMNLVFLEY 392 (732)
T ss_pred EEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeeccc--ccccchhhhHH
Confidence 76665444333222233322 2221 11 123444332 2 688899999999999987 99999999999
Q ss_pred HhcC----CCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHH
Q 023290 193 MAFQ----LPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGK 249 (284)
Q Consensus 193 ma~G----~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~ 249 (284)
.+|. .+.|.+...|-....++ ..+++.+.+ .+.++.+|...+..++...++..
T Consensus 393 i~~~~~~~~~lVlsef~G~~~tl~d--~aivvnpw~--~~~~~~~i~~al~~s~~e~~~r~ 449 (732)
T KOG1050|consen 393 ILCQENKKSVLVLSEFIGDDTTLED--AAIVVNPWD--GDEFAILISKALTMSDEERELRE 449 (732)
T ss_pred HHhhcccCCceEEeeeccccccccc--cCEEECCcc--hHHHHHHHHHHhhcCHHHHhhcc
Confidence 9883 67777777776776644 478899998 89999999999986655444443
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.0023 Score=51.14 Aligned_cols=139 Identities=17% Similarity=0.207 Sum_probs=82.5
Q ss_pred EEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEE-EecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCH
Q 023290 86 LFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTV 164 (284)
Q Consensus 86 ~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i-~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~ 164 (284)
+++..|.-++ |+ ..++.+..+.+ .++.+.+ +|++.+ ....+++.++.. +++.++-..+++
T Consensus 161 ilI~lGGsDp-k~--lt~kvl~~L~~---------~~~nl~iV~gs~~p----~l~~l~k~~~~~---~~i~~~~~~~dm 221 (318)
T COG3980 161 ILITLGGSDP-KN--LTLKVLAELEQ---------KNVNLHIVVGSSNP----TLKNLRKRAEKY---PNINLYIDTNDM 221 (318)
T ss_pred EEEEccCCCh-hh--hHHHHHHHhhc---------cCeeEEEEecCCCc----chhHHHHHHhhC---CCeeeEecchhH
Confidence 4445665554 33 34455555433 3444444 454332 345555555554 578888778899
Q ss_pred HHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcC----CCCcceeeecCCceeeecCC-CCChHHHHHHHHHHhh
Q 023290 165 APYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA----AGGTTEIVVNGTTGLLHPVG-KEGITPLAKNIVKLAT 239 (284)
Q Consensus 165 ~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~----~~~~~e~v~~~~~g~~~~~~-d~~~~~~~~~i~~l~~ 239 (284)
.++|..||+.|... |.++.||...|+|.++-. .......++. .|+....+ -.........+.++..
T Consensus 222 a~LMke~d~aI~Aa-------GstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~--lg~~~~l~~~l~~~~~~~~~~~i~~ 292 (318)
T COG3980 222 AELMKEADLAISAA-------GSTLYEALLLGVPSLVLPLAENQIATAKEFEA--LGIIKQLGYHLKDLAKDYEILQIQK 292 (318)
T ss_pred HHHHHhcchheecc-------chHHHHHHHhcCCceEEeeeccHHHHHHHHHh--cCchhhccCCCchHHHHHHHHHhhh
Confidence 99999999999544 679999999999944332 2222222211 12222111 0015677788888888
Q ss_pred CHHHHHHHHHHHH
Q 023290 240 HVERRLTMGKRGY 252 (284)
Q Consensus 240 ~~~~~~~~~~~~~ 252 (284)
|+..+..+....+
T Consensus 293 d~~~rk~l~~~~~ 305 (318)
T COG3980 293 DYARRKNLSFGSK 305 (318)
T ss_pred CHHHhhhhhhccc
Confidence 9988877765443
|
|
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0017 Score=58.03 Aligned_cols=138 Identities=14% Similarity=0.096 Sum_probs=79.7
Q ss_pred CCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc
Q 023290 82 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 161 (284)
Q Consensus 82 ~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~ 161 (284)
++..+++.+|++.. .-.+..++++....+ +.++ ++++.-.+.. .. .+++++....+.
T Consensus 275 ~~~vv~vsfGs~~~-~~~~~~~~~~~~~~~-------~~~~-~~iW~~~~~~-----~~---------~l~~n~~~~~W~ 331 (500)
T PF00201_consen 275 KKGVVYVSFGSIVS-SMPEEKLKEIAEAFE-------NLPQ-RFIWKYEGEP-----PE---------NLPKNVLIVKWL 331 (500)
T ss_dssp TTEEEEEE-TSSST-T-HHHHHHHHHHHHH-------CSTT-EEEEEETCSH-----GC---------HHHTTEEEESS-
T ss_pred CCCEEEEecCcccc-hhHHHHHHHHHHHHh-------hCCC-cccccccccc-----cc---------cccceEEEeccc
Confidence 45567778888753 233333444433333 2255 6666544320 01 123478888886
Q ss_pred cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----CcceeeecCCceeeecCCCCChHHHHHHHHHH
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKL 237 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l 237 (284)
++ .+++++..+-+.-+. . .-+++.||+.+|+|+|+-..- .+...+++.+.|...+..+.+.+++.++|.++
T Consensus 332 PQ-~~lL~hp~v~~fitH---g-G~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~v 406 (500)
T PF00201_consen 332 PQ-NDLLAHPRVKLFITH---G-GLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRAAIREV 406 (500)
T ss_dssp -H-HHHHTSTTEEEEEES------HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHHHHHHH
T ss_pred cc-hhhhhcccceeeeec---c-ccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHHHHHHH
Confidence 43 467876655433332 2 246999999999999987543 34445556667888887776689999999999
Q ss_pred hhCHHHHHHH
Q 023290 238 ATHVERRLTM 247 (284)
Q Consensus 238 ~~~~~~~~~~ 247 (284)
++|+..++++
T Consensus 407 l~~~~y~~~a 416 (500)
T PF00201_consen 407 LENPSYKENA 416 (500)
T ss_dssp HHSHHHHHHH
T ss_pred HhhhHHHHHH
Confidence 9998654443
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.016 Score=51.13 Aligned_cols=116 Identities=11% Similarity=0.004 Sum_probs=68.6
Q ss_pred EEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----CcceeeecCCceeeecCCC----CC
Q 023290 155 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVNGTTGLLHPVGK----EG 226 (284)
Q Consensus 155 v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~e~v~~~~~g~~~~~~d----~~ 226 (284)
+.+.++..+ ..++++..+...-+. -| -++++||+++|+|+|+-... .+...+..-+.|+.++..+ .+
T Consensus 341 ~vv~~W~PQ-~~IL~H~~v~~FvtH---cG-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~ 415 (472)
T PLN02670 341 MIHVGWVPQ-VKILSHESVGGFLTH---CG-WNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFT 415 (472)
T ss_pred eEEeCcCCH-HHHhcCcccceeeec---CC-cchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCc
Confidence 556677633 357877777433332 22 35999999999999987533 3333444456676664311 24
Q ss_pred hHHHHHHHHHHhhCHH--HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 023290 227 ITPLAKNIVKLATHVE--RRLTMGKRGYERVKEIFQEHHMAERIAVVLKEV 275 (284)
Q Consensus 227 ~~~~~~~i~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (284)
.+++.++|.+++.+++ .+++-.++.++.+.+.=...++++.+.+.+.+.
T Consensus 416 ~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 416 SDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred HHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 8999999999997642 222223333333444445555555555555443
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.015 Score=47.27 Aligned_cols=182 Identities=13% Similarity=0.123 Sum_probs=99.9
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCcc----ccchhhhhhhHHHHHHHHHHHHhCCCCCC-eE
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSK----ELMEVAEDNVAKRVLREHVRESLGVRNED-LL 86 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~----~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~ 86 (284)
..++.++.++..+..-...+.+ +|..+.++ +-.||+-. ..|.+ ..++.+++|+.++. ++
T Consensus 122 l~~Pla~~ii~P~~~~~~~~~~-----~G~~p~~i-~~~~giae~~~v~~f~p----------d~evlkeLgl~~~~~yI 185 (346)
T COG1817 122 LTLPLADVIITPEAIDEEELLD-----FGADPNKI-SGYNGIAELANVYGFVP----------DPEVLKELGLEEGETYI 185 (346)
T ss_pred cchhhhhheecccccchHHHHH-----hCCCccce-ecccceeEEeecccCCC----------CHHHHHHcCCCCCCceE
Confidence 4456677666655544433222 45544443 33444321 11222 15677889998854 44
Q ss_pred EEEecccc-----ccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc
Q 023290 87 FAIINSVS-----RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 161 (284)
Q Consensus 87 i~~~g~~~-----~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~ 161 (284)
++-.-.+. ..++.+.+.+++..+. +.-.+++... ...++..+.+. ++......
T Consensus 186 VmRpe~~~A~y~~g~~~~~~~~~li~~l~-----------k~giV~ipr~--------~~~~eife~~~---n~i~pk~~ 243 (346)
T COG1817 186 VMRPEPWGAHYDNGDRGISVLPDLIKELK-----------KYGIVLIPRE--------KEQAEIFEGYR---NIIIPKKA 243 (346)
T ss_pred EEeeccccceeeccccchhhHHHHHHHHH-----------hCcEEEecCc--------hhHHHHHhhhc---cccCCccc
Confidence 43332221 2345555555555552 2235555543 33344444431 22222223
Q ss_pred cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC---CcceeeecCCceeeecCCCCChHHHHHHHHHHh
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG---GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLA 238 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~---~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~ 238 (284)
-|-..++..|++++-.+ |.-.-||...|+|.|++.-| +..++. -+.|.++...| +.+..+...+.+
T Consensus 244 vD~l~Llyya~lvig~g-------gTMarEaAlLGtpaIs~~pGkll~vdk~l--ie~G~~~~s~~--~~~~~~~a~~~l 312 (346)
T COG1817 244 VDTLSLLYYATLVIGAG-------GTMAREAALLGTPAISCYPGKLLAVDKYL--IEKGLLYHSTD--EIAIVEYAVRNL 312 (346)
T ss_pred ccHHHHHhhhheeecCC-------chHHHHHHHhCCceEEecCCccccccHHH--HhcCceeecCC--HHHHHHHHHHHh
Confidence 45456888899988332 66788999999999998744 233333 24688998887 776666666666
Q ss_pred hCHH
Q 023290 239 THVE 242 (284)
Q Consensus 239 ~~~~ 242 (284)
.++.
T Consensus 313 ~~~~ 316 (346)
T COG1817 313 KYRR 316 (346)
T ss_pred hchh
Confidence 5543
|
|
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.027 Score=50.14 Aligned_cols=84 Identities=12% Similarity=-0.006 Sum_probs=53.0
Q ss_pred CcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceeeec-CCceeee-------
Q 023290 153 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVN-GTTGLLH------- 220 (284)
Q Consensus 153 ~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v~~-~~~g~~~------- 220 (284)
.++.+.++... ..++.++++...-+. .| -++++||+.+|+|+|+-...+ +...+.+ -..|+-+
T Consensus 345 ~g~~v~~w~PQ-~~iL~h~~v~~fvtH---~G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~ 419 (482)
T PLN03007 345 KGLIIRGWAPQ-VLILDHQATGGFVTH---CG-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVK 419 (482)
T ss_pred CCEEEecCCCH-HHHhccCccceeeec---Cc-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccc
Confidence 47888888733 478888877333332 33 359999999999999875432 2222211 1233332
Q ss_pred -cCCCCChHHHHHHHHHHhhCH
Q 023290 221 -PVGKEGITPLAKNIVKLATHV 241 (284)
Q Consensus 221 -~~~d~~~~~~~~~i~~l~~~~ 241 (284)
+....+.+++++++.+++.++
T Consensus 420 ~~~~~~~~~~l~~av~~~m~~~ 441 (482)
T PLN03007 420 VKGDFISREKVEKAVREVIVGE 441 (482)
T ss_pred cccCcccHHHHHHHHHHHhcCc
Confidence 122224889999999999875
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.016 Score=51.26 Aligned_cols=84 Identities=15% Similarity=-0.007 Sum_probs=54.2
Q ss_pred CcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----CcceeeecC-CceeeecC-----
Q 023290 153 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVNG-TTGLLHPV----- 222 (284)
Q Consensus 153 ~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~e~v~~~-~~g~~~~~----- 222 (284)
+++.+.++. .-..++.++++...-+ +.| -++++||+++|+|+|+-... .+...+.+. +.|+-+..
T Consensus 323 ~~~~v~~w~-pQ~~iL~h~~v~~fvt---HgG-~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~ 397 (459)
T PLN02448 323 DMGLVVPWC-DQLKVLCHSSVGGFWT---HCG-WNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEE 397 (459)
T ss_pred CCEEEeccC-CHHHHhccCccceEEe---cCc-hhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccC
Confidence 367777776 3446888888733333 222 45999999999999987543 333344332 35555531
Q ss_pred CCCChHHHHHHHHHHhhCH
Q 023290 223 GKEGITPLAKNIVKLATHV 241 (284)
Q Consensus 223 ~d~~~~~~~~~i~~l~~~~ 241 (284)
+..+.+++++++.+++.++
T Consensus 398 ~~~~~~~l~~av~~vl~~~ 416 (459)
T PLN02448 398 TLVGREEIAELVKRFMDLE 416 (459)
T ss_pred CcCcHHHHHHHHHHHhcCC
Confidence 1124899999999999864
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.018 Score=50.71 Aligned_cols=88 Identities=13% Similarity=-0.014 Sum_probs=58.1
Q ss_pred CcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----Ccceeeec-CCceeeecCCCCCh
Q 023290 153 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVN-GTTGLLHPVGKEGI 227 (284)
Q Consensus 153 ~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~e~v~~-~~~g~~~~~~d~~~ 227 (284)
+++.+.++. .-..+++++++...-+. .| -++++||+.+|+|+|+.... .+...+.+ -+.|+-+...+ .
T Consensus 328 ~~~~v~~w~-PQ~~iL~h~~v~~fvtH---~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~--~ 400 (448)
T PLN02562 328 KQGKVVSWA-PQLEVLKHQAVGCYLTH---CG-WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFG--Q 400 (448)
T ss_pred cCEEEEecC-CHHHHhCCCccceEEec---Cc-chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCC--H
Confidence 577777776 44568888776443342 33 35999999999999987533 33444433 24455554333 8
Q ss_pred HHHHHHHHHHhhCHHHHHHH
Q 023290 228 TPLAKNIVKLATHVERRLTM 247 (284)
Q Consensus 228 ~~~~~~i~~l~~~~~~~~~~ 247 (284)
++++++|.+++.+++.+++.
T Consensus 401 ~~l~~~v~~~l~~~~~r~~a 420 (448)
T PLN02562 401 KEVEEGLRKVMEDSGMGERL 420 (448)
T ss_pred HHHHHHHHHHhCCHHHHHHH
Confidence 99999999999887655443
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.04 Score=48.39 Aligned_cols=94 Identities=7% Similarity=-0.127 Sum_probs=58.8
Q ss_pred cEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----Ccceeeec-CCceeeecCCC---C
Q 023290 154 RVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVN-GTTGLLHPVGK---E 225 (284)
Q Consensus 154 ~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~e~v~~-~~~g~~~~~~d---~ 225 (284)
++.+.++..+. +++++..+...-+. -| -++++||+++|+|+|+-... .+..++.+ -+.|+.++..+ .
T Consensus 312 g~~v~~W~PQ~-~iL~H~~v~~FvtH---cG-~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~ 386 (442)
T PLN02208 312 GVVWGGWVQQP-LILDHPSIGCFVNH---CG-PGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWF 386 (442)
T ss_pred CcEeeccCCHH-HHhcCCccCeEEcc---CC-chHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcC
Confidence 56666776333 57888877544443 23 35999999999999987533 23333222 34566664321 2
Q ss_pred ChHHHHHHHHHHhhCH-HHHHHHHHHHH
Q 023290 226 GITPLAKNIVKLATHV-ERRLTMGKRGY 252 (284)
Q Consensus 226 ~~~~~~~~i~~l~~~~-~~~~~~~~~~~ 252 (284)
+.+++.++|.+++.++ +..+++.++++
T Consensus 387 ~~~~l~~ai~~~m~~~~e~g~~~r~~~~ 414 (442)
T PLN02208 387 SKESLSNAIKSVMDKDSDLGKLVRSNHT 414 (442)
T ss_pred cHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 4889999999999764 33444444444
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.078 Score=47.09 Aligned_cols=80 Identities=10% Similarity=0.050 Sum_probs=49.9
Q ss_pred CcEEEeccccCHHHHHhh--ccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCC----CCcceeee-cCCceeeecCC--
Q 023290 153 DRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA----GGTTEIVV-NGTTGLLHPVG-- 223 (284)
Q Consensus 153 ~~v~~~~~~~~~~~~~~~--ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~----~~~~e~v~-~~~~g~~~~~~-- 223 (284)
.++.+.++.. ...++.+ ++++|. +.| -++++||+++|+|+|+-.. ..+...+. .-+.|+.+..+
T Consensus 343 ~g~~v~~w~P-Q~~vL~h~~v~~fvt-----H~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~ 415 (477)
T PLN02863 343 RGLVIRGWAP-QVAILSHRAVGAFLT-----HCG-WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGAD 415 (477)
T ss_pred CCEEecCCCC-HHHHhcCCCcCeEEe-----cCC-chHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCC
Confidence 3577777763 3567776 555663 223 3599999999999998643 33333332 22556655221
Q ss_pred -CCChHHHHHHHHHHhh
Q 023290 224 -KEGITPLAKNIVKLAT 239 (284)
Q Consensus 224 -d~~~~~~~~~i~~l~~ 239 (284)
..+.+++.+++.+++.
T Consensus 416 ~~~~~~~v~~~v~~~m~ 432 (477)
T PLN02863 416 TVPDSDELARVFMESVS 432 (477)
T ss_pred CCcCHHHHHHHHHHHhh
Confidence 1126889999998874
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.031 Score=49.34 Aligned_cols=83 Identities=11% Similarity=0.069 Sum_probs=53.0
Q ss_pred cEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----Ccceeeec-CCceeeecCC----C
Q 023290 154 RVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVN-GTTGLLHPVG----K 224 (284)
Q Consensus 154 ~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~e~v~~-~~~g~~~~~~----d 224 (284)
+..+.++.. -..+++++++...-+ +.|+ ++++||+.+|+|+|+-... .+...+.+ -+.|+.+... .
T Consensus 325 ~g~v~~w~P-Q~~iL~h~~vg~Fit---H~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~ 399 (456)
T PLN02210 325 QGVVLEWSP-QEKILSHMAISCFVT---HCGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGE 399 (456)
T ss_pred CeEEEecCC-HHHHhcCcCcCeEEe---eCCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCc
Confidence 444557653 346888888433333 2333 4899999999999987543 23334433 4567665421 1
Q ss_pred CChHHHHHHHHHHhhCH
Q 023290 225 EGITPLAKNIVKLATHV 241 (284)
Q Consensus 225 ~~~~~~~~~i~~l~~~~ 241 (284)
.+.+++++++.+++.++
T Consensus 400 ~~~~~l~~av~~~m~~~ 416 (456)
T PLN02210 400 LKVEEVERCIEAVTEGP 416 (456)
T ss_pred CCHHHHHHHHHHHhcCc
Confidence 24889999999999764
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.029 Score=49.40 Aligned_cols=84 Identities=14% Similarity=0.041 Sum_probs=53.9
Q ss_pred CcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----CcceeeecC-CceeeecCCCCCh
Q 023290 153 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVNG-TTGLLHPVGKEGI 227 (284)
Q Consensus 153 ~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~e~v~~~-~~g~~~~~~d~~~ 227 (284)
++..+.++. .-..++.+.++...-+ +.| -++++||+++|+|+|+-... .+...+.+. +.|+.+. +..+.
T Consensus 324 ~~g~v~~w~-PQ~~iL~h~~v~~fvt---H~G-~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~-~~~~~ 397 (451)
T PLN02410 324 GRGYIVKWA-PQKEVLSHPAVGGFWS---HCG-WNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE-GDLDR 397 (451)
T ss_pred CCeEEEccC-CHHHHhCCCccCeeee---cCc-hhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC-CcccH
Confidence 466667776 3335787766633223 233 35999999999999987533 333333333 5666653 23348
Q ss_pred HHHHHHHHHHhhCHH
Q 023290 228 TPLAKNIVKLATHVE 242 (284)
Q Consensus 228 ~~~~~~i~~l~~~~~ 242 (284)
++++++|.+++.+++
T Consensus 398 ~~v~~av~~lm~~~~ 412 (451)
T PLN02410 398 GAVERAVKRLMVEEE 412 (451)
T ss_pred HHHHHHHHHHHcCCc
Confidence 999999999997653
|
|
| >PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.011 Score=48.24 Aligned_cols=106 Identities=15% Similarity=0.150 Sum_probs=64.7
Q ss_pred CCCeEEEEecccccc-------ccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCc
Q 023290 82 NEDLLFAIINSVSRG-------KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDR 154 (284)
Q Consensus 82 ~~~~~i~~~g~~~~~-------k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~ 154 (284)
.++.+++++.+.... .....+++.+..+.+ ..|+.++++--.+........ ....+.....+
T Consensus 115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~-------~~p~~~lvvK~HP~~~~~~~~----~~~~~~~~~~~ 183 (269)
T PF05159_consen 115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAK-------ENPDAKLVVKPHPDERGGNKY----SYLEELPNLPN 183 (269)
T ss_pred CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHH-------HCCCCEEEEEECchhhCCCCh----hHhhhhhcCCC
Confidence 345566677776653 234555666665554 237788777554311000011 22222211235
Q ss_pred EEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC
Q 023290 155 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG 205 (284)
Q Consensus 155 v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~ 205 (284)
+.++...-++..++..||.++.-+ +.+.+||+.+|+||++...+
T Consensus 184 ~~~~~~~~~~~~Ll~~s~~Vvtin-------StvGlEAll~gkpVi~~G~~ 227 (269)
T PF05159_consen 184 VVIIDDDVNLYELLEQSDAVVTIN-------STVGLEALLHGKPVIVFGRA 227 (269)
T ss_pred eEEECCCCCHHHHHHhCCEEEEEC-------CHHHHHHHHcCCceEEecCc
Confidence 666655568999999999998655 46999999999999997544
|
Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport |
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.037 Score=48.63 Aligned_cols=85 Identities=11% Similarity=-0.005 Sum_probs=57.4
Q ss_pred CcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCC----CCcceeeec-CCceeeecCC---C
Q 023290 153 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA----GGTTEIVVN-GTTGLLHPVG---K 224 (284)
Q Consensus 153 ~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~----~~~~e~v~~-~~~g~~~~~~---d 224 (284)
.++.+.++.. -..+++++++...-+. .| -++++||+++|+|+|+... ..+...+.+ -+.|+.++.. .
T Consensus 334 ~g~~v~~W~P-Q~~iL~H~~v~~FvTH---~G-~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~ 408 (451)
T PLN03004 334 KGMVVKSWAP-QVPVLNHKAVGGFVTH---CG-WNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGF 408 (451)
T ss_pred CcEEEEeeCC-HHHHhCCCccceEecc---Cc-chHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCc
Confidence 3677777763 3358999998443342 22 3599999999999998753 334444433 3567766532 1
Q ss_pred CChHHHHHHHHHHhhCHH
Q 023290 225 EGITPLAKNIVKLATHVE 242 (284)
Q Consensus 225 ~~~~~~~~~i~~l~~~~~ 242 (284)
.+.++++++|.+++.+++
T Consensus 409 ~~~e~l~~av~~vm~~~~ 426 (451)
T PLN03004 409 VSSTEVEKRVQEIIGECP 426 (451)
T ss_pred cCHHHHHHHHHHHhcCHH
Confidence 248999999999998754
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.09 Score=46.26 Aligned_cols=92 Identities=8% Similarity=-0.091 Sum_probs=57.0
Q ss_pred EEEeccccCHHHHHhhccE--EEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----Ccceee-ecCCceeeecCC---C
Q 023290 155 VHFVNKTLTVAPYLAAIDV--LVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIV-VNGTTGLLHPVG---K 224 (284)
Q Consensus 155 v~~~~~~~~~~~~~~~ad~--~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~e~v-~~~~~g~~~~~~---d 224 (284)
..+.++.. -..+++++.+ +|.. -| -++++||+++|+|+|+-... .+...+ +.-+.|+.+... .
T Consensus 314 ~vv~~w~P-Q~~vL~h~~v~~fvtH-----~G-~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~ 386 (446)
T PLN00414 314 IVWEGWVE-QPLILSHPSVGCFVNH-----CG-FGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGW 386 (446)
T ss_pred eEEeccCC-HHHHhcCCccceEEec-----Cc-hhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCc
Confidence 44456653 3367877755 5532 22 36999999999999987533 233344 234566666321 1
Q ss_pred CChHHHHHHHHHHhhCH-HHHHHHHHHHHH
Q 023290 225 EGITPLAKNIVKLATHV-ERRLTMGKRGYE 253 (284)
Q Consensus 225 ~~~~~~~~~i~~l~~~~-~~~~~~~~~~~~ 253 (284)
.+.+++++++.+++.++ +..+++.+++++
T Consensus 387 ~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~ 416 (446)
T PLN00414 387 FSKESLRDTVKSVMDKDSEIGNLVKRNHKK 416 (446)
T ss_pred cCHHHHHHHHHHHhcCChhhHHHHHHHHHH
Confidence 24899999999999764 444455555443
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.12 Score=45.36 Aligned_cols=119 Identities=10% Similarity=-0.092 Sum_probs=66.0
Q ss_pred cEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----Ccceeee-cCCceeeecCC---CC
Q 023290 154 RVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVV-NGTTGLLHPVG---KE 225 (284)
Q Consensus 154 ~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~e~v~-~~~~g~~~~~~---d~ 225 (284)
.+...++. .-.+++++..+...-+. .| -++++||+.+|+|+|+-... .+...+. .-..|+.+... +.
T Consensus 318 G~v~~~W~-PQ~~vL~h~~v~~FvtH---~G-~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~ 392 (453)
T PLN02764 318 GVVWGGWV-QQPLILSHPSVGCFVSH---CG-FGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWF 392 (453)
T ss_pred CcEEeCCC-CHHHHhcCcccCeEEec---CC-chHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCcc
Confidence 35555665 33357777555322232 22 46999999999999987543 2333442 23445544221 22
Q ss_pred ChHHHHHHHHHHhhCH-HHHHHHHHHHH---HHHHHhcCHHHHHHHHHHHHHHHHH
Q 023290 226 GITPLAKNIVKLATHV-ERRLTMGKRGY---ERVKEIFQEHHMAERIAVVLKEVLK 277 (284)
Q Consensus 226 ~~~~~~~~i~~l~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (284)
+.+++.+++.+++.++ +..+++.++++ +.+.+-=|.....+++.+.+.+..+
T Consensus 393 ~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~~GSS~~~l~~lv~~~~~~~~ 448 (453)
T PLN02764 393 SKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLASPGLLTGYVDNFIESLQDLVS 448 (453)
T ss_pred CHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc
Confidence 4899999999999764 33444444443 3343333444444444444444443
|
|
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.091 Score=46.70 Aligned_cols=81 Identities=12% Similarity=-0.045 Sum_probs=50.6
Q ss_pred cEEEeccccCHHHHHhhcc--EEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----Cccee-eecCCceeeecCC---
Q 023290 154 RVHFVNKTLTVAPYLAAID--VLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEI-VVNGTTGLLHPVG--- 223 (284)
Q Consensus 154 ~v~~~~~~~~~~~~~~~ad--~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~e~-v~~~~~g~~~~~~--- 223 (284)
+..+.++. .-..++++.. ++|. +.| -++++||+++|+|+|+-... .+... ++.-+.|+.+...
T Consensus 341 rg~v~~w~-PQ~~iL~h~~vg~fvt-----H~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 413 (475)
T PLN02167 341 RGLVCGWA-PQVEILAHKAIGGFVS-----HCG-WNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVS 413 (475)
T ss_pred CeeeeccC-CHHHHhcCcccCeEEe-----eCC-cccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccccc
Confidence 44556765 4446787755 4552 233 34899999999999986433 23222 3334456655321
Q ss_pred ----CCChHHHHHHHHHHhhCH
Q 023290 224 ----KEGITPLAKNIVKLATHV 241 (284)
Q Consensus 224 ----d~~~~~~~~~i~~l~~~~ 241 (284)
..+.++++++|.+++.+.
T Consensus 414 ~~~~~~~~~~l~~av~~~m~~~ 435 (475)
T PLN02167 414 AYGEIVKADEIAGAVRSLMDGE 435 (475)
T ss_pred ccCCcccHHHHHHHHHHHhcCC
Confidence 123889999999999754
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.15 Score=45.44 Aligned_cols=85 Identities=14% Similarity=0.022 Sum_probs=52.1
Q ss_pred CcEEEeccccCHHHHHhhcc--EEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----Ccc-eeeecCCceeeecC---
Q 023290 153 DRVHFVNKTLTVAPYLAAID--VLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTT-EIVVNGTTGLLHPV--- 222 (284)
Q Consensus 153 ~~v~~~~~~~~~~~~~~~ad--~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~-e~v~~~~~g~~~~~--- 222 (284)
+++.+.++.. -..++++.. ++| + +.| -++++||+.+|+|+|+-... .+. ..++.-+.|+.++.
T Consensus 342 ~~g~v~~W~P-Q~~iL~H~~v~~Fv--t---H~G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~ 414 (481)
T PLN02554 342 DIGKVIGWAP-QVAVLAKPAIGGFV--T---HCG-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWR 414 (481)
T ss_pred cCceEEeeCC-HHHHhCCcccCccc--c---cCc-cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecccc
Confidence 4666667753 345774444 455 3 233 35999999999999987533 232 22334345655531
Q ss_pred --------CCCChHHHHHHHHHHhh-CHHHH
Q 023290 223 --------GKEGITPLAKNIVKLAT-HVERR 244 (284)
Q Consensus 223 --------~d~~~~~~~~~i~~l~~-~~~~~ 244 (284)
...+.+++.++|.+++. +++.+
T Consensus 415 ~~~~~~~~~~~~~e~l~~av~~vm~~~~~~r 445 (481)
T PLN02554 415 GDLLAGEMETVTAEEIERGIRCLMEQDSDVR 445 (481)
T ss_pred ccccccccCeEcHHHHHHHHHHHhcCCHHHH
Confidence 12248899999999996 54433
|
|
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.17 Score=45.01 Aligned_cols=93 Identities=15% Similarity=0.087 Sum_probs=55.7
Q ss_pred CCcEEEeccccCHHHHHh--hccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----CcceeeecC-Cceeeec---
Q 023290 152 QDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVNG-TTGLLHP--- 221 (284)
Q Consensus 152 ~~~v~~~~~~~~~~~~~~--~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~e~v~~~-~~g~~~~--- 221 (284)
.+++.+.++... ..++. .+.++|. +.| -++++||+.+|+|+|+.... .+..++.+. +.|+.+.
T Consensus 336 ~~~g~v~~W~PQ-~~iL~H~~v~~Fvt-----H~G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~ 408 (480)
T PLN02555 336 GDKGKIVQWCPQ-EKVLAHPSVACFVT-----HCG-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGE 408 (480)
T ss_pred CCceEEEecCCH-HHHhCCCccCeEEe-----cCC-cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCc
Confidence 356777777633 45674 4555663 222 45999999999999987543 233333333 5565552
Q ss_pred --CCCCChHHHHHHHHHHhhCHHHHHHHHHHHH
Q 023290 222 --VGKEGITPLAKNIVKLATHVERRLTMGKRGY 252 (284)
Q Consensus 222 --~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 252 (284)
.+..+.+++.++|.+++.+++ -+++.++++
T Consensus 409 ~~~~~v~~~~v~~~v~~vm~~~~-g~~~r~ra~ 440 (480)
T PLN02555 409 AENKLITREEVAECLLEATVGEK-AAELKQNAL 440 (480)
T ss_pred cccCcCcHHHHHHHHHHHhcCch-HHHHHHHHH
Confidence 112237899999999997532 233444433
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.16 Score=44.70 Aligned_cols=84 Identities=10% Similarity=0.052 Sum_probs=55.3
Q ss_pred CcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----CcceeeecC-CceeeecCCC---
Q 023290 153 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVNG-TTGLLHPVGK--- 224 (284)
Q Consensus 153 ~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~e~v~~~-~~g~~~~~~d--- 224 (284)
+++.+.++.. -..++++.++...-+. -| .++++||+++|+|+|+-... .+...+.+. ..|+-+...+
T Consensus 317 ~~~~i~~W~P-Q~~iL~H~~v~~FvtH---cG-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~ 391 (449)
T PLN02173 317 DKSLVLKWSP-QLQVLSNKAIGCFMTH---CG-WNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESG 391 (449)
T ss_pred CceEEeCCCC-HHHHhCCCccceEEec---Cc-cchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCC
Confidence 4678788864 3468888875444442 22 46999999999999987533 333444332 4565543211
Q ss_pred -CChHHHHHHHHHHhhCH
Q 023290 225 -EGITPLAKNIVKLATHV 241 (284)
Q Consensus 225 -~~~~~~~~~i~~l~~~~ 241 (284)
.+.+++++++.+++.++
T Consensus 392 ~~~~e~v~~av~~vm~~~ 409 (449)
T PLN02173 392 IAKREEIEFSIKEVMEGE 409 (449)
T ss_pred cccHHHHHHHHHHHhcCC
Confidence 13799999999999764
|
|
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.33 Score=43.12 Aligned_cols=82 Identities=10% Similarity=-0.100 Sum_probs=54.0
Q ss_pred cEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----Ccceee-ecCCceeeecCC--CCC
Q 023290 154 RVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIV-VNGTTGLLHPVG--KEG 226 (284)
Q Consensus 154 ~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~e~v-~~~~~g~~~~~~--d~~ 226 (284)
++.+.++.. -..++.+..+...-+. .| -++++||+.+|+|+|+-... .+...+ +.-+.|+.++.. ..+
T Consensus 339 g~vv~~W~P-Q~~iL~h~~vg~FitH---~G-~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~ 413 (481)
T PLN02992 339 GFVVPSWAP-QAEILAHQAVGGFLTH---CG-WSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEVIS 413 (481)
T ss_pred CEEEeecCC-HHHHhCCcccCeeEec---Cc-hhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCccc
Confidence 577777763 3467888877333332 22 35999999999999987543 333344 244556666431 234
Q ss_pred hHHHHHHHHHHhhC
Q 023290 227 ITPLAKNIVKLATH 240 (284)
Q Consensus 227 ~~~~~~~i~~l~~~ 240 (284)
.++++++|.+++.+
T Consensus 414 ~~~l~~av~~vm~~ 427 (481)
T PLN02992 414 RSKIEALVRKVMVE 427 (481)
T ss_pred HHHHHHHHHHHhcC
Confidence 89999999999975
|
|
| >TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.088 Score=44.48 Aligned_cols=108 Identities=11% Similarity=0.107 Sum_probs=64.0
Q ss_pred HHHHHHhCCCC-CCeEEEEeccc-cccccHH--HHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHH
Q 023290 72 EHVRESLGVRN-EDLLFAIINSV-SRGKGQD--LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVM 147 (284)
Q Consensus 72 ~~~r~~~~~~~-~~~~i~~~g~~-~~~k~~~--~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~ 147 (284)
..+...+++.. +.++++..|.- .+.|.+. .+.+.+..+.+ .+.+++++|++. ..+..+....
T Consensus 162 ~~~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~---------~~~~ivl~G~~~-----e~~~~~~i~~ 227 (334)
T TIGR02195 162 AAALAKFGLDTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLID---------QGYQVVLFGSAK-----DHPAGNEIEA 227 (334)
T ss_pred HHHHHHcCCCCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHH---------CCCEEEEEEChh-----hHHHHHHHHH
Confidence 34456666654 45666666653 3555543 45554444432 457888888753 2333333333
Q ss_pred HcCCCCcE-EEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEc
Q 023290 148 QKKIQDRV-HFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT 202 (284)
Q Consensus 148 ~~~~~~~v-~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~ 202 (284)
..+ ..+ .+.|.. .++..+++.||++|.+-. ..+-=|.|+|+|+|+-
T Consensus 228 ~~~--~~~~~l~g~~sL~el~ali~~a~l~I~~DS-------Gp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 228 LLP--GELRNLAGETSLDEAVDLIALAKAVVTNDS-------GLMHVAAALNRPLVAL 276 (334)
T ss_pred hCC--cccccCCCCCCHHHHHHHHHhCCEEEeeCC-------HHHHHHHHcCCCEEEE
Confidence 321 222 345543 788999999999996543 2444588999999974
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.33 Score=43.21 Aligned_cols=82 Identities=10% Similarity=-0.048 Sum_probs=51.7
Q ss_pred EEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCC----CCcceee-ecCCceeeecCC-----C
Q 023290 155 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA----GGTTEIV-VNGTTGLLHPVG-----K 224 (284)
Q Consensus 155 v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~----~~~~e~v-~~~~~g~~~~~~-----d 224 (284)
+.+.++. .-..++.++++...-+ +.|+ ++++||+++|+|+|+-.. ..+...+ +.-+.|+.+... .
T Consensus 341 ~~v~~w~-PQ~~iL~h~~vg~fvt---H~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~ 415 (480)
T PLN00164 341 LVWPTWA-PQKEILAHAAVGGFVT---HCGW-NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNF 415 (480)
T ss_pred eEEeecC-CHHHHhcCcccCeEEe---eccc-chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCc
Confidence 5555665 3446788888643333 2333 499999999999998643 3333333 333556655321 1
Q ss_pred CChHHHHHHHHHHhhCH
Q 023290 225 EGITPLAKNIVKLATHV 241 (284)
Q Consensus 225 ~~~~~~~~~i~~l~~~~ 241 (284)
.+.++++++|.+++.++
T Consensus 416 ~~~e~l~~av~~vm~~~ 432 (480)
T PLN00164 416 VEAAELERAVRSLMGGG 432 (480)
T ss_pred CcHHHHHHHHHHHhcCC
Confidence 13799999999999764
|
|
| >cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS) | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.049 Score=44.71 Aligned_cols=98 Identities=18% Similarity=0.126 Sum_probs=58.8
Q ss_pred eEEEEeccccccccH--HHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc-
Q 023290 85 LLFAIINSVSRGKGQ--DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT- 161 (284)
Q Consensus 85 ~~i~~~g~~~~~k~~--~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~- 161 (284)
.+++..|+-.+.|.. +.+.+.+..+.+ .+++++++|+.. ..+..+.+.+..+....+.+.+..
T Consensus 123 ~i~i~~~~~~~~k~w~~~~~~~l~~~l~~---------~~~~ivl~g~~~-----e~~~~~~i~~~~~~~~~~~~~~~~~ 188 (279)
T cd03789 123 VVVLPPGASGPAKRWPAERFAALADRLLA---------RGARVVLTGGPA-----ERELAEEIAAALGGPRVVNLAGKTS 188 (279)
T ss_pred EEEECCCCCCccccCCHHHHHHHHHHHHH---------CCCEEEEEechh-----hHHHHHHHHHhcCCCccccCcCCCC
Confidence 455556655554543 445555554433 468888988753 334444444443222234445543
Q ss_pred -cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcC
Q 023290 162 -LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA 203 (284)
Q Consensus 162 -~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~ 203 (284)
.++..+++.||++|.+-. | .+--|.++|+|+|+--
T Consensus 189 l~e~~~li~~~~l~I~~Ds------g-~~HlA~a~~~p~i~l~ 224 (279)
T cd03789 189 LRELAALLARADLVVTNDS------G-PMHLAAALGTPTVALF 224 (279)
T ss_pred HHHHHHHHHhCCEEEeeCC------H-HHHHHHHcCCCEEEEE
Confidence 788999999999997642 2 4445679999999753
|
Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.13 Score=42.81 Aligned_cols=140 Identities=12% Similarity=0.159 Sum_probs=85.4
Q ss_pred CCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEecccc
Q 023290 83 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL 162 (284)
Q Consensus 83 ~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~ 162 (284)
...+++.+|. -.-|.+.+ +++......+... ...-+++.|...|. ...+++.......++|.+..+..
T Consensus 219 ~~~Ilvs~GG--G~dG~eLi-~~~l~A~~~l~~l----~~~~~ivtGP~MP~-----~~r~~l~~~A~~~p~i~I~~f~~ 286 (400)
T COG4671 219 GFDILVSVGG--GADGAELI-ETALAAAQLLAGL----NHKWLIVTGPFMPE-----AQRQKLLASAPKRPHISIFEFRN 286 (400)
T ss_pred cceEEEecCC--ChhhHHHH-HHHHHHhhhCCCC----CcceEEEeCCCCCH-----HHHHHHHHhcccCCCeEEEEhhh
Confidence 3455666664 23454444 4433333332211 12234556654432 33444444444456899999999
Q ss_pred CHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcce--eeec---CCcee--eecCCCCChHHHHHHHH
Q 023290 163 TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTE--IVVN---GTTGL--LHPVGKEGITPLAKNIV 235 (284)
Q Consensus 163 ~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e--~v~~---~~~g~--~~~~~d~~~~~~~~~i~ 235 (284)
++..++..|+.+|.-+ |+ +++.|=+++|||.+.-.....++ .++. .+-|+ +..+.+..++.++++|.
T Consensus 287 ~~~~ll~gA~~vVSm~-----GY-NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~ 360 (400)
T COG4671 287 DFESLLAGARLVVSMG-----GY-NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALK 360 (400)
T ss_pred hHHHHHHhhheeeecc-----cc-hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHH
Confidence 9999999999999543 22 58899999999999876554443 1111 12232 45556666999999999
Q ss_pred HHhhC
Q 023290 236 KLATH 240 (284)
Q Consensus 236 ~l~~~ 240 (284)
.++..
T Consensus 361 ~~l~~ 365 (400)
T COG4671 361 AALAR 365 (400)
T ss_pred hcccC
Confidence 98874
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.57 Score=39.15 Aligned_cols=120 Identities=18% Similarity=0.086 Sum_probs=66.4
Q ss_pred HHHHHhCCCCCCeEEEEecccccc--ccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcC
Q 023290 73 HVRESLGVRNEDLLFAIINSVSRG--KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKK 150 (284)
Q Consensus 73 ~~r~~~~~~~~~~~i~~~g~~~~~--k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~ 150 (284)
.+..+++-.+...+.+.+|.-+.. -+.+..-+.+.++...... ....+.|..+.- -..+....+++..+
T Consensus 136 ~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~-----~~~~~~vttSRR-Tp~~~~~~L~~~~~--- 206 (311)
T PF06258_consen 136 AWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAA-----YGGSLLVTTSRR-TPPEAEAALRELLK--- 206 (311)
T ss_pred hhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHh-----CCCeEEEEcCCC-CcHHHHHHHHHhhc---
Confidence 334445544455555567754432 2233222233333333322 346777777632 11123333433333
Q ss_pred CCCcEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC
Q 023290 151 IQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG 206 (284)
Q Consensus 151 ~~~~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~ 206 (284)
-...+.+.+.. .-+..+|..||.++++..+ -.-+.||.+.|+||.+....+
T Consensus 207 ~~~~~~~~~~~~~nPy~~~La~ad~i~VT~DS-----vSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 207 DNPGVYIWDGTGENPYLGFLAAADAIVVTEDS-----VSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred CCCceEEecCCCCCcHHHHHHhCCEEEEcCcc-----HHHHHHHHHcCCCEEEecCCC
Confidence 23456444432 4578999999999988651 235779999999999987665
|
The function of this family is unknown. |
| >KOG3349 consensus Predicted glycosyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.11 Score=37.56 Aligned_cols=101 Identities=10% Similarity=0.144 Sum_probs=61.6
Q ss_pred eEEEEeccccccccHHHHHHHH--HHHHHHHHhhccCCCCeEEE-EEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc
Q 023290 85 LLFAIINSVSRGKGQDLFLHSF--YESLELIKEKKLEVPSVHAV-IIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 161 (284)
Q Consensus 85 ~~i~~~g~~~~~k~~~~~~~a~--~~l~~~~~~~~~~~~~~~l~-i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~ 161 (284)
-+++.+|+-. ++.++.++ ....+.+.+. .-.+++ -+|.+.... .+......+..++ .|....+.
T Consensus 5 ~vFVTVGtT~----Fd~LI~~Vl~~~~~~~L~k~----G~~kLiiQ~Grg~~~~---~d~~~~~~k~~gl--~id~y~f~ 71 (170)
T KOG3349|consen 5 TVFVTVGTTS----FDDLISCVLSEEFLQELQKR----GFTKLIIQIGRGQPFF---GDPIDLIRKNGGL--TIDGYDFS 71 (170)
T ss_pred EEEEEecccc----HHHHHHHHcCHHHHHHHHHc----CccEEEEEecCCccCC---CCHHHhhcccCCe--EEEEEecC
Confidence 3566777644 67777655 2344555543 333444 467763321 1223322233333 35555566
Q ss_pred cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCC
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA 204 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~ 204 (284)
.++.+.++.||++|.-. ...+++|-+..|+|.|+.-+
T Consensus 72 psl~e~I~~AdlVIsHA------GaGS~letL~l~KPlivVvN 108 (170)
T KOG3349|consen 72 PSLTEDIRSADLVISHA------GAGSCLETLRLGKPLIVVVN 108 (170)
T ss_pred ccHHHHHhhccEEEecC------CcchHHHHHHcCCCEEEEeC
Confidence 89999999999999433 24599999999999997643
|
|
| >PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.37 Score=40.49 Aligned_cols=97 Identities=12% Similarity=0.013 Sum_probs=55.6
Q ss_pred CCeEEEEeccccccccHH--HHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEecc
Q 023290 83 EDLLFAIINSVSRGKGQD--LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 160 (284)
Q Consensus 83 ~~~~i~~~g~~~~~k~~~--~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~ 160 (284)
.+++++..|.-.+.|.+. .+.+.+..+.+ .+.++++.|+++. ..+..++..+.. ..+.+.|.
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~---------~~~~ivl~~G~~~----e~~~~~~i~~~~---~~~~l~g~ 241 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAP---------SGLRIKLPWGAEH----EEQRAKRLAEGF---PYVEVLPK 241 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHH---------CCCeEEEeCCCHH----HHHHHHHHHccC---CcceecCC
Confidence 345544555544445433 44444444432 4567777633321 223333333321 24556665
Q ss_pred c--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEc
Q 023290 161 T--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT 202 (284)
Q Consensus 161 ~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~ 202 (284)
. .++..+++.||++|.+-. ..+-=|.|+|+|+|+-
T Consensus 242 ~sL~elaali~~a~l~I~nDS-------Gp~HlA~A~g~p~val 278 (322)
T PRK10964 242 LSLEQVARVLAGAKAVVSVDT-------GLSHLTAALDRPNITL 278 (322)
T ss_pred CCHHHHHHHHHhCCEEEecCC-------cHHHHHHHhCCCEEEE
Confidence 3 788899999999997543 2455589999999975
|
|
| >PRK10422 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.096 Score=44.63 Aligned_cols=101 Identities=9% Similarity=-0.002 Sum_probs=60.3
Q ss_pred CCeEEEEeccccccccHH--HHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEecc
Q 023290 83 EDLLFAIINSVSRGKGQD--LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 160 (284)
Q Consensus 83 ~~~~i~~~g~~~~~k~~~--~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~ 160 (284)
+.++++.+|.-.+.|.+. .+.+.+..+.+ .+.+++++|+.... .....++..+.......+.+.|.
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~---------~~~~vvl~ggp~e~---e~~~~~~i~~~~~~~~~~~l~g~ 250 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQA---------RGYEVVLTSGPDKD---DLACVNEIAQGCQTPPVTALAGK 250 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHH---------CCCeEEEEcCCChH---HHHHHHHHHHhcCCCccccccCC
Confidence 456677788766666644 44444444432 46788888764311 12222333332222223445565
Q ss_pred c--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEc
Q 023290 161 T--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT 202 (284)
Q Consensus 161 ~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~ 202 (284)
. .++..+++.||++|..-. ..+-=|.|+|+|+|+-
T Consensus 251 ~sL~el~ali~~a~l~v~nDS-------Gp~HlAaA~g~P~v~l 287 (352)
T PRK10422 251 TTFPELGALIDHAQLFIGVDS-------APAHIAAAVNTPLICL 287 (352)
T ss_pred CCHHHHHHHHHhCCEEEecCC-------HHHHHHHHcCCCEEEE
Confidence 3 788999999999996542 2444588999999975
|
|
| >TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.34 Score=40.64 Aligned_cols=97 Identities=14% Similarity=0.053 Sum_probs=57.9
Q ss_pred CCeEEEEeccccccccH--HHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEecc
Q 023290 83 EDLLFAIINSVSRGKGQ--DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 160 (284)
Q Consensus 83 ~~~~i~~~g~~~~~k~~--~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~ 160 (284)
++.+++..|.-.+.|.+ +.+.+.+..+.+ .+.+++++|+++. ..+..+...+..+ +..+.|.
T Consensus 179 ~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~---------~~~~~vl~~g~~~----e~~~~~~i~~~~~---~~~l~g~ 242 (319)
T TIGR02193 179 APYAVLLHATSRDDKTWPEERWRELARLLLA---------RGLQIVLPWGNDA----EKQRAERIAEALP---GAVVLPK 242 (319)
T ss_pred CCEEEEEeCCCcccCCCCHHHHHHHHHHHHH---------CCCeEEEeCCCHH----HHHHHHHHHhhCC---CCeecCC
Confidence 45566677765566664 344444444432 4677787754431 2333444444332 2244564
Q ss_pred c--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEc
Q 023290 161 T--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT 202 (284)
Q Consensus 161 ~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~ 202 (284)
. .++..+++.||++|.+-. ..+-=|.|+|+|+|+-
T Consensus 243 ~sL~el~ali~~a~l~I~~DS-------gp~HlAaa~g~P~i~l 279 (319)
T TIGR02193 243 MSLAEVAALLAGADAVVGVDT-------GLTHLAAALDKPTVTL 279 (319)
T ss_pred CCHHHHHHHHHcCCEEEeCCC-------hHHHHHHHcCCCEEEE
Confidence 3 688899999999996543 2444578999999975
|
This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. |
| >PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.22 Score=42.33 Aligned_cols=108 Identities=11% Similarity=0.105 Sum_probs=62.6
Q ss_pred HHHHhCCC-CCCeEEEEeccc-cccccHH--HHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHc
Q 023290 74 VRESLGVR-NEDLLFAIINSV-SRGKGQD--LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK 149 (284)
Q Consensus 74 ~r~~~~~~-~~~~~i~~~g~~-~~~k~~~--~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~ 149 (284)
+...+++. ++.++++..|.- .+.|.+. .+.+.+..+.+ .+++++++|+.. ..+..++..+..
T Consensus 170 ~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~---------~~~~vvl~Gg~~-----e~~~~~~i~~~~ 235 (348)
T PRK10916 170 TCAAFSLSSERPIIGFCPGAEFGPAKRWPHYHYAELAQQLID---------EGYQVVLFGSAK-----DHEAGNEILAAL 235 (348)
T ss_pred HHHHcCCCCCCCEEEEeCCCCCccccCCCHHHHHHHHHHHHH---------CCCeEEEEeCHH-----hHHHHHHHHHhc
Confidence 44455543 345666677764 2555533 44444444432 567888888753 233334443333
Q ss_pred CCC--Cc-EEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEc
Q 023290 150 KIQ--DR-VHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT 202 (284)
Q Consensus 150 ~~~--~~-v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~ 202 (284)
+.. .+ +.+.|.. .++..+++.||++|.+-. ..+-=|.|.|+|+|+-
T Consensus 236 ~~~~~~~~~~l~g~~sL~el~ali~~a~l~I~nDT-------Gp~HlAaA~g~P~val 286 (348)
T PRK10916 236 NTEQQAWCRNLAGETQLEQAVILIAACKAIVTNDS-------GLMHVAAALNRPLVAL 286 (348)
T ss_pred ccccccceeeccCCCCHHHHHHHHHhCCEEEecCC-------hHHHHHHHhCCCEEEE
Confidence 211 12 3444543 788899999999996542 2444589999999974
|
|
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.86 Score=40.28 Aligned_cols=85 Identities=9% Similarity=0.006 Sum_probs=53.1
Q ss_pred CCcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----CcceeeecC-CceeeecC--CC
Q 023290 152 QDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVNG-TTGLLHPV--GK 224 (284)
Q Consensus 152 ~~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~e~v~~~-~~g~~~~~--~d 224 (284)
+++..+.++.. -.+++++.++...-+. .| -++++||+.+|+|+|+-... .+...+.+. +.|+-+.. .+
T Consensus 326 ~~~g~v~~W~P-Q~~iL~h~~vg~fvtH---~G-~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~ 400 (455)
T PLN02152 326 EEVGMIVSWCS-QIEVLRHRAVGCFVTH---CG-WSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEG 400 (455)
T ss_pred cCCeEEEeeCC-HHHHhCCcccceEEee---CC-cccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCC
Confidence 34666667764 3468888887444442 22 35999999999999987532 233333331 23444321 11
Q ss_pred -CChHHHHHHHHHHhhCH
Q 023290 225 -EGITPLAKNIVKLATHV 241 (284)
Q Consensus 225 -~~~~~~~~~i~~l~~~~ 241 (284)
.+.+++++++.+++.++
T Consensus 401 ~~~~e~l~~av~~vm~~~ 418 (455)
T PLN02152 401 LVERGEIRRCLEAVMEEK 418 (455)
T ss_pred cCcHHHHHHHHHHHHhhh
Confidence 13789999999999754
|
|
| >TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.34 Score=41.14 Aligned_cols=103 Identities=10% Similarity=0.029 Sum_probs=58.7
Q ss_pred CCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc-
Q 023290 83 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT- 161 (284)
Q Consensus 83 ~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~- 161 (284)
+.++++..|.-.+.|.+. .+-|.++.+.+.+ .+..++++|++... .....++.....+-...+.+.|..
T Consensus 181 ~~~i~i~p~a~~~~K~Wp--~e~~~~l~~~l~~-----~~~~ivl~g~p~~~---e~~~~~~i~~~~~~~~~~~l~g~~s 250 (344)
T TIGR02201 181 QNYIVIQPTSRWFFKCWD--NDRFSALIDALHA-----RGYEVVLTSGPDKD---ELAMVNEIAQGCQTPRVTSLAGKLT 250 (344)
T ss_pred CCEEEEeCCCCccccCCC--HHHHHHHHHHHHh-----CCCeEEEecCCCHH---HHHHHHHHHhhCCCCcccccCCCCC
Confidence 455666777655555543 1333333333322 45778888864311 112233333332222223355553
Q ss_pred -cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEc
Q 023290 162 -LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT 202 (284)
Q Consensus 162 -~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~ 202 (284)
.++..+++.||++|.+-. ..+-=|.|+|+|+|+-
T Consensus 251 L~el~ali~~a~l~Vs~DS-------Gp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 251 LPQLAALIDHARLFIGVDS-------VPMHMAAALGTPLVAL 285 (344)
T ss_pred HHHHHHHHHhCCEEEecCC-------HHHHHHHHcCCCEEEE
Confidence 788999999999996542 2455589999999975
|
This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II. |
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.97 Score=40.12 Aligned_cols=82 Identities=12% Similarity=-0.017 Sum_probs=49.0
Q ss_pred CcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----Ccceeeec-CCceeeec------
Q 023290 153 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVN-GTTGLLHP------ 221 (284)
Q Consensus 153 ~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~e~v~~-~~~g~~~~------ 221 (284)
++..+.++..+ .+++++..+...-+. -| -++++||+.+|+|+|+-... .+..++.+ -+.|+-+.
T Consensus 332 ~~g~i~~W~PQ-~~IL~H~~vg~FvTH---~G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~ 406 (468)
T PLN02207 332 GRGMICGWSPQ-VEILAHKAVGGFVSH---CG-WNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVH 406 (468)
T ss_pred CCeEEEEeCCH-HHHhcccccceeeec---Cc-cccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccc
Confidence 45666677532 356777666333332 22 25899999999999987533 33333222 34555331
Q ss_pred CCC-CChHHHHHHHHHHhh
Q 023290 222 VGK-EGITPLAKNIVKLAT 239 (284)
Q Consensus 222 ~~d-~~~~~~~~~i~~l~~ 239 (284)
..+ .+.+++.++|.+++.
T Consensus 407 ~~~~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 407 SDEIVNANEIETAIRCVMN 425 (468)
T ss_pred cCCcccHHHHHHHHHHHHh
Confidence 111 137899999999996
|
|
| >PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.12 Score=41.50 Aligned_cols=103 Identities=15% Similarity=0.141 Sum_probs=55.7
Q ss_pred CCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc
Q 023290 82 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 161 (284)
Q Consensus 82 ~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~ 161 (284)
++..+++.+|.-.+.|.+.. +-+.++.+.+.+ ..+.++++|+.... ..+......+... ...+.+.+..
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~--e~~~~l~~~l~~-----~~~~vvl~g~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~ 172 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPA--EKWAELIERLKE-----RGYRVVLLGGPEEQ---EKEIADQIAAGLQ-NPVINLAGKT 172 (247)
T ss_dssp TSSEEEEE---SSGGGS--H--HHHHHHHHHHCC-----CT-EEEE--SSHHH---HHHHHHHHHTTHT-TTTEEETTTS
T ss_pred cCCeEEEeecCCCccccCCH--HHHHHHHHHHHh-----hCceEEEEccchHH---HHHHHHHHHHhcc-cceEeecCCC
Confidence 45677777887777776544 444555555543 33788888875310 1222222332221 1146666654
Q ss_pred --cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEc
Q 023290 162 --LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT 202 (284)
Q Consensus 162 --~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~ 202 (284)
.++..+++.||++|.+-. ..+-=|.|+|+|+|+-
T Consensus 173 ~l~e~~ali~~a~~~I~~Dt-------g~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 173 SLRELAALISRADLVIGNDT-------GPMHLAAALGTPTVAL 208 (247)
T ss_dssp -HHHHHHHHHTSSEEEEESS-------HHHHHHHHTT--EEEE
T ss_pred CHHHHHHHHhcCCEEEecCC-------hHHHHHHHHhCCEEEE
Confidence 778899999999997643 2455589999999986
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A. |
| >KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.19 E-value=1.1 Score=40.21 Aligned_cols=92 Identities=12% Similarity=0.005 Sum_probs=51.5
Q ss_pred CcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcC----CCCcceeeecCCceeeecCCCCChH
Q 023290 153 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA----AGGTTEIVVNGTTGLLHPVGKEGIT 228 (284)
Q Consensus 153 ~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~----~~~~~e~v~~~~~g~~~~~~d~~~~ 228 (284)
.+|...++.++..-++.+..+...-+ +.|++ +++|++.+|+|+|+.. ..-+...+.+...+.+....+....
T Consensus 335 ~nV~~~~W~PQ~~lll~H~~v~~FvT---HgG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~~ 410 (496)
T KOG1192|consen 335 GNVVLSKWAPQNDLLLDHPAVGGFVT---HGGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLVSE 410 (496)
T ss_pred CceEEecCCCcHHHhcCCCcCcEEEE---CCccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcCcH
Confidence 47888888755543333332322223 34444 5699999999999542 2233333333333333333332233
Q ss_pred HHHHHHHHHhhCHHHHHHHH
Q 023290 229 PLAKNIVKLATHVERRLTMG 248 (284)
Q Consensus 229 ~~~~~i~~l~~~~~~~~~~~ 248 (284)
.+.+++..++.+++..+...
T Consensus 411 ~~~~~~~~il~~~~y~~~~~ 430 (496)
T KOG1192|consen 411 ELLEAIKEILENEEYKEAAK 430 (496)
T ss_pred HHHHHHHHHHcChHHHHHHH
Confidence 38888888888876554433
|
|
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=95.14 E-value=2.3 Score=38.06 Aligned_cols=82 Identities=12% Similarity=-0.015 Sum_probs=48.9
Q ss_pred CcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceeee-cCCceeeec------
Q 023290 153 DRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVV-NGTTGLLHP------ 221 (284)
Q Consensus 153 ~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v~-~~~~g~~~~------ 221 (284)
.++.+.++... ..++.++++...-+. . ..++++||+++|+|+|+-...+ +...+. .-+.|+-+.
T Consensus 344 ~g~~v~~w~pq-~~iL~h~~v~~fvtH---~-G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~ 418 (491)
T PLN02534 344 RGLLIKGWAPQ-VLILSHPAIGGFLTH---C-GWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVR 418 (491)
T ss_pred CCeeccCCCCH-HHHhcCCccceEEec---C-ccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEeccccccc
Confidence 35666677643 568888888433332 2 2469999999999999875432 111111 112222221
Q ss_pred C------C-CCChHHHHHHHHHHhh
Q 023290 222 V------G-KEGITPLAKNIVKLAT 239 (284)
Q Consensus 222 ~------~-d~~~~~~~~~i~~l~~ 239 (284)
. + ..+.+++++++.+++.
T Consensus 419 ~~~~~~~~~~v~~eev~~~v~~~m~ 443 (491)
T PLN02534 419 WGDEERVGVLVKKDEVEKAVKTLMD 443 (491)
T ss_pred ccccccccCccCHHHHHHHHHHHhc
Confidence 0 0 0127899999999996
|
|
| >PF15024 Glyco_transf_18: Glycosyltransferase family 18 | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.27 Score=43.76 Aligned_cols=99 Identities=15% Similarity=0.103 Sum_probs=67.0
Q ss_pred cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCc-----ceeeec-------------------CCce
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGT-----TEIVVN-------------------GTTG 217 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~-----~e~v~~-------------------~~~g 217 (284)
.++..+++.+.++|-...- +| |-+.+||+++|+|.|-+..... .+++++ .-.-
T Consensus 333 ~ef~~lL~~akvfiGlGfP-~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG~PhV 409 (559)
T PF15024_consen 333 DEFQQLLRKAKVFIGLGFP-YE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIGEPHV 409 (559)
T ss_pred HHHHHHHHhhhEeeecCCC-CC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCCCCeE
Confidence 6899999999999955432 33 4589999999999997753211 111111 1123
Q ss_pred eeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 023290 218 LLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 274 (284)
Q Consensus 218 ~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (284)
+.++.+| .+++.++|.+++.++- .-++--.|+.+.+.+++..+++.
T Consensus 410 ytVd~~n--~~~v~~Avk~il~~~v---------~Py~P~efT~egmLeRv~~~ie~ 455 (559)
T PF15024_consen 410 YTVDINN--STEVEAAVKAILATPV---------EPYLPYEFTCEGMLERVNALIEK 455 (559)
T ss_pred EEEcCCC--HHHHHHHHHHHHhcCC---------CCcCCcccCHHHHHHHHHHHHHh
Confidence 5566666 8999999999987642 12344468888888888776653
|
|
| >PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.21 Score=33.74 Aligned_cols=80 Identities=9% Similarity=0.201 Sum_probs=51.5
Q ss_pred EEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEecc----c-c--CHHHHHhhccEEEEcCCC-CcCccchhHHHHHhcC
Q 023290 125 AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK----T-L--TVAPYLAAIDVLVQNSQA-WGECFGRITIEAMAFQ 196 (284)
Q Consensus 125 l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~----~-~--~~~~~~~~ad~~~~ps~~-~~e~~~~~~~Eama~G 196 (284)
++++|+... ....+++.+++.|.. ..++|. . . .+...+..||++|++... .....-.+--+|-..|
T Consensus 2 vliVGG~~~----~~~~~~~~~~~~G~~--~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ 75 (97)
T PF10087_consen 2 VLIVGGRED----RERRYKRILEKYGGK--LIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYG 75 (97)
T ss_pred EEEEcCCcc----cHHHHHHHHHHcCCE--EEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcC
Confidence 567776221 678888899998864 333322 1 2 378889999999988651 0111222333778889
Q ss_pred CCEEEcCCCCccee
Q 023290 197 LPVLGTAAGGTTEI 210 (284)
Q Consensus 197 ~Pvi~~~~~~~~e~ 210 (284)
+|++.+...+...+
T Consensus 76 ip~~~~~~~~~~~l 89 (97)
T PF10087_consen 76 IPIIYSRSRGVSSL 89 (97)
T ss_pred CcEEEECCCCHHHH
Confidence 99999986665443
|
|
| >COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.6 Score=39.51 Aligned_cols=99 Identities=20% Similarity=0.184 Sum_probs=62.6
Q ss_pred CeEEEEec-cccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc-
Q 023290 84 DLLFAIIN-SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT- 161 (284)
Q Consensus 84 ~~~i~~~g-~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~- 161 (284)
..+++..| +-...|.+.. +-+.++.+.+.+ ...+++++|+.. ..+..+++.+..+. .+.+.|..
T Consensus 176 ~~i~i~pg~s~~~~K~wp~--e~~~~l~~~l~~-----~~~~Vvl~g~~~-----e~e~~~~i~~~~~~--~~~l~~k~s 241 (334)
T COG0859 176 PYIVINPGASRGSAKRWPL--EHYAELAELLIA-----KGYQVVLFGGPD-----EEERAEEIAKGLPN--AVILAGKTS 241 (334)
T ss_pred CeEEEeccccccccCCCCH--HHHHHHHHHHHH-----CCCEEEEecChH-----HHHHHHHHHHhcCC--ccccCCCCC
Confidence 56666777 5546666442 334444444443 347888988762 45555556655432 22255554
Q ss_pred -cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcC
Q 023290 162 -LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA 203 (284)
Q Consensus 162 -~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~ 203 (284)
.++..++..||++|.+.. | .+-=|.|.|+|+|+--
T Consensus 242 L~e~~~li~~a~l~I~~DS------g-~~HlAaA~~~P~I~iy 277 (334)
T COG0859 242 LEELAALIAGADLVIGNDS------G-PMHLAAALGTPTIALY 277 (334)
T ss_pred HHHHHHHHhcCCEEEccCC------h-HHHHHHHcCCCEEEEE
Confidence 788999999999997653 2 4445899999999753
|
|
| >PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.092 Score=43.56 Aligned_cols=61 Identities=13% Similarity=0.058 Sum_probs=42.3
Q ss_pred cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcC-CCEEEcCC--CCcceeeecCCceeeecCCC
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQ-LPVLGTAA--GGTTEIVVNGTTGLLHPVGK 224 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G-~Pvi~~~~--~~~~e~v~~~~~g~~~~~~d 224 (284)
.+..+.|+.+..+++|.- ...+..-++|||++| +|||.++. -.+.+++.=..-.+.++..+
T Consensus 228 ~~~~~~l~~S~FCL~p~G--~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~ 291 (302)
T PF03016_consen 228 SEYMELLRNSKFCLCPRG--DGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEAD 291 (302)
T ss_pred hHHHHhcccCeEEEECCC--CCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHH
Confidence 468899999999999874 444778999999999 57777653 24455553344455565433
|
Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane |
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=93.19 E-value=3.8 Score=33.06 Aligned_cols=40 Identities=20% Similarity=0.154 Sum_probs=29.7
Q ss_pred cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG 206 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~ 206 (284)
.-+..++..||.+|.+.. . =+-+.||.+.|+||-+..-..
T Consensus 236 NPY~~~La~Adyii~TaD--S---inM~sEAasTgkPv~~~~~~~ 275 (329)
T COG3660 236 NPYIDMLAAADYIISTAD--S---INMCSEAASTGKPVFILEPPN 275 (329)
T ss_pred CchHHHHhhcceEEEecc--h---hhhhHHHhccCCCeEEEecCC
Confidence 346788999999998765 1 125679999999998765443
|
|
| >COG1927 Mtd Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=92.07 E-value=4.5 Score=31.20 Aligned_cols=141 Identities=11% Similarity=0.084 Sum_probs=71.8
Q ss_pred CCCCeEEEEEecCCCCChHHH-HHHHHHHHHcCCCCcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHh-cC
Q 023290 119 EVPSVHAVIIGSDMNAQTKFE-SELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMA-FQ 196 (284)
Q Consensus 119 ~~~~~~l~i~G~~~~~~~~~~-~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama-~G 196 (284)
+++++.+.++|.|..-+++-. .......++. ..|++++-|.+-....|.+.-|.++ +|
T Consensus 28 dRedi~vrVvgsgaKM~Pe~veaav~~~~e~~--------------------~pDfvi~isPNpaaPGP~kARE~l~~s~ 87 (277)
T COG1927 28 DREDIEVRVVGSGAKMDPECVEAAVTEMLEEF--------------------NPDFVIYISPNPAAPGPKKAREILSDSD 87 (277)
T ss_pred ccCCceEEEeccccccChHHHHHHHHHHHHhc--------------------CCCEEEEeCCCCCCCCchHHHHHHhhcC
Confidence 448999999999764333211 1111222221 3355444333214455677888877 68
Q ss_pred CCEEE-cCCCCc--ceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 023290 197 LPVLG-TAAGGT--TEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 197 ~Pvi~-~~~~~~--~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (284)
+|+|. +|.++. ++-+++..-|+++-.. +.+..+=+++++ |-+.........+.+...=-...+.+.+.++++
T Consensus 88 ~PaiiigDaPg~~vkdeleeqGlGYIivk~----DpmiGArREFLD-PvEMA~fNaDv~kVLa~tGa~R~vQeaiD~~ie 162 (277)
T COG1927 88 VPAIIIGDAPGLKVKDELEEQGLGYIIVKA----DPMIGARREFLD-PVEMASFNADVMKVLAATGAFRLVQEAIDKVIE 162 (277)
T ss_pred CCEEEecCCccchhHHHHHhcCCeEEEecC----CcccchhhhhcC-HHHHHhhhhHHHHHHHhccHHHHHHHHHHHHHH
Confidence 88874 555553 3444555667765543 345555555553 222222222222222222223334455666666
Q ss_pred HHHHhhcCCCC
Q 023290 274 EVLKKSKSHLY 284 (284)
Q Consensus 274 ~~~~~~~~~l~ 284 (284)
.+-....++|+
T Consensus 163 ~vk~gk~~eLP 173 (277)
T COG1927 163 DVKEGKEPELP 173 (277)
T ss_pred HHhcCCCcCCC
Confidence 66665555553
|
|
| >COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=91.92 E-value=7.8 Score=33.60 Aligned_cols=207 Identities=12% Similarity=0.129 Sum_probs=105.4
Q ss_pred HHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccccccc---c---HHHHHHHHHH
Q 023290 35 TRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGK---G---QDLFLHSFYE 108 (284)
Q Consensus 35 ~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~~~k---~---~~~~~~a~~~ 108 (284)
..+.++....++..+..|-...++........ .......++++.++.+|+|.-++.... + ....++. .+
T Consensus 163 f~~~f~~~~~~i~~~G~Pr~D~~~~~~~~~~~----~~~~~~~~~~~~~k~vIlyaPTfr~~~~~~~~~~~~~~~~~-~~ 237 (388)
T COG1887 163 FAEAFNIDKENILETGYPRNDKLFDEAGKTED----ILLIQLALPLPQDKKVILYAPTFRDNDVLIGTQFFNLDIDI-EK 237 (388)
T ss_pred HHHHhcccccceeecCcccchhhhhhccchhh----hHHHhhhcCCcccCceEEecCCccCCccccchhhhhhhhhH-HH
Confidence 34456777777766655544433332222111 122445566777788898877776654 2 2222221 22
Q ss_pred HHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhccEEEEcCCCCcCccchh
Q 023290 109 SLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRI 188 (284)
Q Consensus 109 l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~ 188 (284)
+.+.+.+ .++.+++--+.. ....+...- ...+.+..+....++..+|..+|++|.- ++.+
T Consensus 238 ~~~~l~~-----~~~~ii~k~Hp~-----is~~~~~~~---~~~~~~~~vs~~~di~dll~~sDiLITD-------ySSv 297 (388)
T COG1887 238 LKEKLGE-----NEYVIIVKPHPL-----ISDKIDKRY---ALDDFVLDVSDNADINDLLLVSDILITD-------YSSV 297 (388)
T ss_pred HHHhhcc-----CCeEEEEecChh-----hhhhhhhhh---hccceeEecccchhHHHHHhhhCEEEee-------chHH
Confidence 2222221 455555544321 111111110 1112334444356899999999999943 3569
Q ss_pred HHHHHhcCCCEEEc--CCCCc---ceee---ecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcC
Q 023290 189 TIEAMAFQLPVLGT--AAGGT---TEIV---VNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQ 260 (284)
Q Consensus 189 ~~Eama~G~Pvi~~--~~~~~---~e~v---~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~ 260 (284)
..|+|...+|||.. |.... +.+. +...-|-++.. ..++.++|.....+++...+..+...+.+.. +.
T Consensus 298 ~fdf~~l~KPiify~~D~~~y~~~rg~~~d~~~~~Pg~~~~~----~~~li~ai~~~~~~~~~~~~k~~~~~~~~~~-~~ 372 (388)
T COG1887 298 IFDFMLLDKPIIFYTYDLEQYDELRGFYLDYKFEAPGEVVET----QEELIDAIKPYDEDGNYDLEKLRVFNDKFNS-YE 372 (388)
T ss_pred HHHHHHhcCcEEEEecChHHHHhhhhhhhhHHhcCCcccccc----HHHHHHHHHhhhcccchhHHHHHHHHHhhcc-cc
Confidence 99999999999965 22111 1111 12223444443 6788999988887544333333333333322 23
Q ss_pred HHHHHHHHHHH
Q 023290 261 EHHMAERIAVV 271 (284)
Q Consensus 261 ~~~~~~~~~~~ 271 (284)
-....+++.+.
T Consensus 373 dg~ss~ri~~~ 383 (388)
T COG1887 373 DGRSSERILKL 383 (388)
T ss_pred cccHHHHHHHH
Confidence 34444444443
|
|
| >TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB | Back alignment and domain information |
|---|
Probab=91.52 E-value=3.6 Score=34.11 Aligned_cols=72 Identities=11% Similarity=-0.011 Sum_probs=43.2
Q ss_pred CeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEE
Q 023290 122 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLG 201 (284)
Q Consensus 122 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~ 201 (284)
+.+++++......+ ....+.....+.-+..+......+++..+++.||++|.... ..++=|+.+|+|+|+
T Consensus 205 g~~v~~i~~~~~~D---~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~~vI~~Rl-------H~~I~A~~~gvP~i~ 274 (298)
T TIGR03609 205 GAFVLFLPFQQPQD---LPLARALRDQLLGPAEVLSPLDPEELLGLFASARLVIGMRL-------HALILAAAAGVPFVA 274 (298)
T ss_pred CCeEEEEeCCcchh---HHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCCEEEEech-------HHHHHHHHcCCCEEE
Confidence 55565555432222 23333444443333344322223678889999999987665 267779999999996
Q ss_pred cC
Q 023290 202 TA 203 (284)
Q Consensus 202 ~~ 203 (284)
-.
T Consensus 275 i~ 276 (298)
T TIGR03609 275 LS 276 (298)
T ss_pred ee
Confidence 63
|
The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). |
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=91.50 E-value=9.8 Score=33.91 Aligned_cols=80 Identities=10% Similarity=0.003 Sum_probs=47.0
Q ss_pred EEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceee-ecCCceeeec----CCCC
Q 023290 155 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIV-VNGTTGLLHP----VGKE 225 (284)
Q Consensus 155 v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v-~~~~~g~~~~----~~d~ 225 (284)
+.+.++..+. .++.+..+...-+. -| -++++||+++|+|+|+-...+ +...+ +.-+.|+-+. .+..
T Consensus 337 l~v~~W~PQ~-~vL~h~~vg~fvtH---~G-wnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v 411 (470)
T PLN03015 337 LVVTQWAPQV-EILSHRSIGGFLSH---CG-WSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVI 411 (470)
T ss_pred eEEEecCCHH-HHhccCccCeEEec---CC-chhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCcc
Confidence 4555665333 46666666333332 22 358999999999999875422 22222 2233444442 1112
Q ss_pred ChHHHHHHHHHHhh
Q 023290 226 GITPLAKNIVKLAT 239 (284)
Q Consensus 226 ~~~~~~~~i~~l~~ 239 (284)
+-++++++|.+++.
T Consensus 412 ~~e~i~~~v~~lm~ 425 (470)
T PLN03015 412 GREEVASLVRKIVA 425 (470)
T ss_pred CHHHHHHHHHHHHc
Confidence 37899999999995
|
|
| >smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme | Back alignment and domain information |
|---|
Probab=91.44 E-value=2.9 Score=33.89 Aligned_cols=94 Identities=14% Similarity=0.039 Sum_probs=65.8
Q ss_pred cCccchhHHHHHhcCCCEEEcCCC---CcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHh
Q 023290 182 GECFGRITIEAMAFQLPVLGTAAG---GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEI 258 (284)
Q Consensus 182 ~e~~~~~~~Eama~G~Pvi~~~~~---~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 258 (284)
+-+++..+.=-|+|+-.|+..... ...+.+.....=+-+..+. +.+++.++|..+.++++..+++++++++++.+.
T Consensus 154 G~~~S~rl~~~l~~~Svvl~~~~~~~~~~~~~L~P~~HYvPv~~d~-sd~~l~~~i~~~~~~~~~a~~Ia~~~~~~~~~~ 232 (256)
T smart00672 154 GVAWSVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDL-SCRELKEAVDWGNEHDKKAQEIGKRGSEFIQQN 232 (256)
T ss_pred CccchhhHHHHHhcCceEEEeCCchhHHHHhcccCccceEEeeCCC-chhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 334555666678888888876532 1222233333333333321 123499999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHH
Q 023290 259 FQEHHMAERIAVVLKEVL 276 (284)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~ 276 (284)
.+.+.+..-+..++.+.-
T Consensus 233 L~~~~~~~Y~~~ll~eya 250 (256)
T smart00672 233 LSMEDVYDYMFHLLQEYA 250 (256)
T ss_pred cCHHHHHHHHHHHHHHHH
Confidence 999999999888887654
|
|
| >KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] | Back alignment and domain information |
|---|
Probab=91.23 E-value=3.5 Score=36.70 Aligned_cols=133 Identities=13% Similarity=0.071 Sum_probs=73.6
Q ss_pred CCeEEEEEecCCCCChHHHHHHHHHHHH-cCCCCcEEEecc------ccCHHHHHhhccEEEEcCCCCcCccchhHHHHH
Q 023290 121 PSVHAVIIGSDMNAQTKFESELRNYVMQ-KKIQDRVHFVNK------TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAM 193 (284)
Q Consensus 121 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~-~~~~~~v~~~~~------~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eam 193 (284)
..+-+-+.|... ....+..+-++.+. .+....+..... ...+.+.|+.+.++++|.- .+...-.++||+
T Consensus 289 R~~L~~F~G~~~--~~~iR~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~G--d~~ts~R~fdai 364 (464)
T KOG1021|consen 289 RPILAFFAGAPA--GGQIRSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPG--DTPTSPRLFDAI 364 (464)
T ss_pred CceEEEEecccc--CCcHHHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECCCC--CCcccHhHHHHH
Confidence 345556666621 11255555555554 111112222211 2578889999999999986 666777999999
Q ss_pred hcC-CCEEEcCCC--CcceeeecCCceeeecCCCCChHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHhcCHH
Q 023290 194 AFQ-LPVLGTAAG--GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT--HVERRLTMGKRGYERVKEIFQEH 262 (284)
Q Consensus 194 a~G-~Pvi~~~~~--~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~--~~~~~~~~~~~~~~~~~~~~~~~ 262 (284)
..| +|||.++.- ...+.+.-..-++.++..+ +... |.+++. ..++...|.++....+...+-+.
T Consensus 365 ~~gCvPViisd~~~lpf~~~~d~~~fSV~v~~~~--v~~~---~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~ 433 (464)
T KOG1021|consen 365 VSGCVPVIISDGIQLPFGDVLDWTEFSVFVPEKD--VPEL---IKNILLSIPEEEVLRMRENVIRLVPRHFLKK 433 (464)
T ss_pred HhCCccEEEcCCcccCcCCCccceEEEEEEEHHH--hhhH---HHHHHHhcCHHHHHHHHHHHHHHHHhhEEeC
Confidence 999 688888752 3333433333455665322 3444 344443 33444555555544444444433
|
|
| >PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS | Back alignment and domain information |
|---|
Probab=90.46 E-value=2.9 Score=36.32 Aligned_cols=94 Identities=12% Similarity=0.032 Sum_probs=69.2
Q ss_pred cCccchhHHHHHhcCCCEEEcCCC---CcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHh
Q 023290 182 GECFGRITIEAMAFQLPVLGTAAG---GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEI 258 (284)
Q Consensus 182 ~e~~~~~~~Eama~G~Pvi~~~~~---~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 258 (284)
+-+++..+-=-|+||-.|+..+.. .+...+....+=+-+...+ +.+++.++|..+.+++++.+++++++++++.+.
T Consensus 223 G~~~S~RlkylL~c~SvVl~~~~~~~e~f~~~L~P~vHYVPV~~~~-d~sdL~~~v~w~~~~~~~A~~IA~~g~~f~~~~ 301 (395)
T PF05686_consen 223 GNAWSGRLKYLLACNSVVLKVKSPYYEFFYRALKPWVHYVPVKRDD-DLSDLEEKVEWLNAHDDEAQRIAENGQRFAREY 301 (395)
T ss_pred CceeehhHHHHHcCCceEEEeCCcHHHHHHhhhcccccEEEecccc-chhhHHHHhhhcccChHHHHHHHHHHHHHHHHH
Confidence 344555666669999999976432 1222333444445555421 389999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHH
Q 023290 259 FQEHHMAERIAVVLKEVL 276 (284)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~ 276 (284)
.+.+.+..-+..++.+.-
T Consensus 302 L~~~~~~~Y~~~LL~eYa 319 (395)
T PF05686_consen 302 LTMEDVYCYWRRLLLEYA 319 (395)
T ss_pred hhhhHHHHHHHHHHHHHH
Confidence 999999988888887653
|
This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence []. |
| >PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis | Back alignment and domain information |
|---|
Probab=90.30 E-value=4.1 Score=32.78 Aligned_cols=36 Identities=14% Similarity=0.243 Sum_probs=30.0
Q ss_pred cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCC
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA 204 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~ 204 (284)
.++..+++.||++|.... ...+=|+++|+|+|+-..
T Consensus 249 ~~~~~~~~~~~~~Is~Rl-------H~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 249 DELLELISQADLVISMRL-------HGAILALSLGVPVIAISY 284 (286)
T ss_pred HHHHHHHhcCCEEEecCC-------HHHHHHHHcCCCEEEEec
Confidence 788899999999998776 256669999999998653
|
CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ]. |
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=89.62 E-value=6.3 Score=32.10 Aligned_cols=157 Identities=12% Similarity=0.083 Sum_probs=80.9
Q ss_pred HHHHHHhCCCCCCeEE---EEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHH----
Q 023290 72 EHVRESLGVRNEDLLF---AIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRN---- 144 (284)
Q Consensus 72 ~~~r~~~~~~~~~~~i---~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~---- 144 (284)
...|..+-.+...+.. +|+||....||+..+++.-.+.++ .+..+-++-|-.... ....-+..
T Consensus 168 ~~~Rstywkd~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~lK--------~~~~~t~~~GierS~--A~~~i~d~~~~~ 237 (355)
T PF11440_consen 168 NKYRSTYWKDVSEKNMNVNRYIGRQTTWKGPRRMFDLHEKILK--------PAGFKTIMEGIERSP--AKISIKDHGIPY 237 (355)
T ss_dssp HHHHHHH---GGGSEEEEEEEE--SSGGG-HHHHHHHHHHTTT--------TTT-EEEEE---SST--HHHHHHHTT--E
T ss_pred HHHHHHHhhhhHhhhcccceeeeeeeeecCcHHHhhhHHHhcC--------CcchhHHhhhhhcCC--ceeeeecCCccc
Confidence 3455555544445555 799999999999999998877543 277888887753321 11111111
Q ss_pred ------HHHHcCC--CCcEEEeccc--cCHHHHHhhccEEEEcCCC---C-cCccchhHHHHHhcCC-CEEEcCCCCcce
Q 023290 145 ------YVMQKKI--QDRVHFVNKT--LTVAPYLAAIDVLVQNSQA---W-GECFGRITIEAMAFQL-PVLGTAAGGTTE 209 (284)
Q Consensus 145 ------~~~~~~~--~~~v~~~~~~--~~~~~~~~~ad~~~~ps~~---~-~e~~~~~~~Eama~G~-Pvi~~~~~~~~e 209 (284)
.+.+..+ ..-+..+|.. ++..+.|+.+-+....+.. + .+.+-.+-+|..|||. ||.-..+|..-.
T Consensus 238 ~y~~~~~~~~~~~~pN~~~~v~~~Yi~~E~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r 317 (355)
T PF11440_consen 238 EYYPKLDCDEPKPAPNSPVPVYGPYIRSEGLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNR 317 (355)
T ss_dssp EEE-CTGGGG---SSS--EEEESS--HHHHHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB
T ss_pred ccCccccccCcccCCCCcceecchhhhHHHHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccce
Confidence 0001111 1236667763 7788888888777654431 1 2235568899999995 555554443322
Q ss_pred -------eeecCCceeeecCCCCChHHHHHHHHHHhhC
Q 023290 210 -------IVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240 (284)
Q Consensus 210 -------~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~ 240 (284)
++......+.++..| .++-.+.|.++..+
T Consensus 318 ~~~D~~~~~~~~~~~I~~De~d--le~T~ekl~E~a~~ 353 (355)
T PF11440_consen 318 FTLDGTRYIDHPYSAIYFDEND--LESTVEKLIEVANN 353 (355)
T ss_dssp -TTTSSBGGSS--S-EEE-TTS--HHHHHHHHHHHHT-
T ss_pred eeecCceeeccCcceeEeccch--HHHHHHHHHHHhcc
Confidence 333344567788777 88888888777654
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >PRK05282 (alpha)-aspartyl dipeptidase; Validated | Back alignment and domain information |
|---|
Probab=88.29 E-value=11 Score=29.98 Aligned_cols=82 Identities=13% Similarity=0.128 Sum_probs=51.8
Q ss_pred eEEEEEecCC--CCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhccEEEEcCCC-------C-cCccchhHHHH
Q 023290 123 VHAVIIGSDM--NAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA-------W-GECFGRITIEA 192 (284)
Q Consensus 123 ~~l~i~G~~~--~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad~~~~ps~~-------~-~e~~~~~~~Ea 192 (284)
.+++++.... .+...+.+..++..+++|.. +..+...++..+.+..||+++.+.-+ | ..++--.+-|+
T Consensus 32 ~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~--v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~ 109 (233)
T PRK05282 32 RKAVFIPYAGVTQSWDDYTAKVAEALAPLGIE--VTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREA 109 (233)
T ss_pred CeEEEECCCCCCCCHHHHHHHHHHHHHHCCCE--EEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHH
Confidence 3455555433 23345677788888888864 55555446677889999988876421 0 01122235588
Q ss_pred HhcCCCEEEcCCCC
Q 023290 193 MAFQLPVLGTAAGG 206 (284)
Q Consensus 193 ma~G~Pvi~~~~~~ 206 (284)
...|+|++.+..|.
T Consensus 110 ~~~G~~~~G~SAGA 123 (233)
T PRK05282 110 VKNGTPYIGWSAGA 123 (233)
T ss_pred HHCCCEEEEECHHH
Confidence 88999999886554
|
|
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=88.05 E-value=1.6 Score=35.86 Aligned_cols=94 Identities=20% Similarity=0.225 Sum_probs=60.1
Q ss_pred cEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCc------ceeee--cCCceeeecCCCC
Q 023290 154 RVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGT------TEIVV--NGTTGLLHPVGKE 225 (284)
Q Consensus 154 ~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~------~e~v~--~~~~g~~~~~~d~ 225 (284)
+..+.-......+++..+|+.+-.. |...=.+...|+|||....-|. .+--. -|..-.++.+.
T Consensus 295 nc~l~lsqqsfadiLH~adaalgmA-------GTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~~-- 365 (412)
T COG4370 295 NCSLWLSQQSFADILHAADAALGMA-------GTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRPE-- 365 (412)
T ss_pred ceEEEEeHHHHHHHHHHHHHHHHhc-------cchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCCc--
Confidence 4444444468888999999966322 5566678999999999864332 22100 03333455553
Q ss_pred ChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 023290 226 GITPLAKNIVKLATHVERRLTMGKRGYERVKE 257 (284)
Q Consensus 226 ~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 257 (284)
++.-.....+++.|++....+..++++++-+
T Consensus 366 -aq~a~~~~q~ll~dp~r~~air~nGqrRiGq 396 (412)
T COG4370 366 -AQAAAQAVQELLGDPQRLTAIRHNGQRRIGQ 396 (412)
T ss_pred -hhhHHHHHHHHhcChHHHHHHHhcchhhccC
Confidence 3444444444999999998888888876644
|
|
| >cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E | Back alignment and domain information |
|---|
Probab=87.46 E-value=11 Score=29.63 Aligned_cols=85 Identities=13% Similarity=0.153 Sum_probs=53.6
Q ss_pred CCeEEEEEecCCCCChHHHHHHHHHHHHc-CCCCcEEEeccccCHHHHHhhccEEEEcCCC-------CcC-ccchhHHH
Q 023290 121 PSVHAVIIGSDMNAQTKFESELRNYVMQK-KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA-------WGE-CFGRITIE 191 (284)
Q Consensus 121 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~~~~~~~~~~~ad~~~~ps~~-------~~e-~~~~~~~E 191 (284)
.+.++.++........++...+.+...++ +....+...-..++..+.+..||++++|.-+ |.+ ++...+-+
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~l~~ 109 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFDTEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAILKA 109 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccCcccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHHHHH
Confidence 56788888876665556777788888888 7632222111135667889999999998621 111 12223445
Q ss_pred HHhcCCCEEEcCCC
Q 023290 192 AMAFQLPVLGTAAG 205 (284)
Q Consensus 192 ama~G~Pvi~~~~~ 205 (284)
+...|+|++.+..|
T Consensus 110 ~~~~g~~i~G~SAG 123 (212)
T cd03146 110 ALERGVVYIGWSAG 123 (212)
T ss_pred HHHCCCEEEEECHh
Confidence 66679999877544
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption. |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=87.37 E-value=1.8 Score=30.73 Aligned_cols=46 Identities=15% Similarity=0.148 Sum_probs=32.2
Q ss_pred cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcce
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTE 209 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e 209 (284)
+++.+++..+|++|-.|. .+..--.+-.++.+|+|+|+..+|...+
T Consensus 59 ~~l~~~~~~~DVvIDfT~--p~~~~~~~~~~~~~g~~~ViGTTG~~~~ 104 (124)
T PF01113_consen 59 DDLEELLEEADVVIDFTN--PDAVYDNLEYALKHGVPLVIGTTGFSDE 104 (124)
T ss_dssp S-HHHHTTH-SEEEEES---HHHHHHHHHHHHHHT-EEEEE-SSSHHH
T ss_pred hhHHHhcccCCEEEEcCC--hHHhHHHHHHHHhCCCCEEEECCCCCHH
Confidence 688899999999998886 5555555667888999999987776543
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P | Back alignment and domain information |
|---|
Probab=86.97 E-value=13 Score=31.93 Aligned_cols=106 Identities=15% Similarity=0.090 Sum_probs=67.5
Q ss_pred HHHHHHHhCCC---CCCeEEEEecccccccc-HHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHH
Q 023290 71 REHVRESLGVR---NEDLLFAIINSVSRGKG-QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYV 146 (284)
Q Consensus 71 ~~~~r~~~~~~---~~~~~i~~~g~~~~~k~-~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~ 146 (284)
+..+.+++|++ ++.+.+..++ ..+. +..+++++... ...+.+.+.++. ....+..+.
T Consensus 168 ~~~~~~~lg~~~~~~~~~~vslF~---Ye~~~l~~ll~~~~~~----------~~pv~llvp~g~------~~~~~~~~~ 228 (374)
T PF10093_consen 168 RAAFLRRLGLPEPEPGALRVSLFC---YENAALASLLDAWAAS----------PKPVHLLVPEGR------ALNSLAAWL 228 (374)
T ss_pred HHHHHHHcCCCCCCCCCeEEEEEe---CCchHHHHHHHHHhcC----------CCCeEEEecCCc------cHHHHHHHh
Confidence 56778889985 4455554444 2233 66777776642 256776666653 344454443
Q ss_pred H----HcC---C--CCcEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEc
Q 023290 147 M----QKK---I--QDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT 202 (284)
Q Consensus 147 ~----~~~---~--~~~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~ 202 (284)
. ..| . .-.+..++++ +++..++..||+-+.=.. =+++-|+-.|+|.|=.
T Consensus 229 ~~~~~~~g~~~~~g~l~l~~lPF~~Q~~yD~LLw~cD~NfVRGE-------DSfVRAqwAgkPFvWh 288 (374)
T PF10093_consen 229 GDALLQAGDSWQRGNLTLHVLPFVPQDDYDRLLWACDFNFVRGE-------DSFVRAQWAGKPFVWH 288 (374)
T ss_pred ccccccCccccccCCeEEEECCCCCHHHHHHHHHhCccceEecc-------hHHHHHHHhCCCceEe
Confidence 3 111 0 1247778876 789999999999876442 2788999999999944
|
The function is unknown. |
| >PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=85.00 E-value=17 Score=28.77 Aligned_cols=96 Identities=11% Similarity=0.121 Sum_probs=52.8
Q ss_pred CCCCeEEEEEecCCCCChHHHHH-HHHHHHHcCCCCcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHh-cC
Q 023290 119 EVPSVHAVIIGSDMNAQTKFESE-LRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMA-FQ 196 (284)
Q Consensus 119 ~~~~~~l~i~G~~~~~~~~~~~~-l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama-~G 196 (284)
.+.++.+.++|.|..-.++..+. .....+++ .-|++|+.|.+..-..|...=|.+. .|
T Consensus 28 dRedI~vrv~gsGaKm~pe~~~~~~~~~~~~~--------------------~pDf~i~isPN~a~PGP~~ARE~l~~~~ 87 (277)
T PRK00994 28 DREDIDVRVVGSGAKMGPEEVEEVVKKMLEEW--------------------KPDFVIVISPNPAAPGPKKAREILKAAG 87 (277)
T ss_pred cccCceEEEeccCCCCCHHHHHHHHHHHHHhh--------------------CCCEEEEECCCCCCCCchHHHHHHHhcC
Confidence 34799999999986443332221 11122222 3355554444214445667777765 58
Q ss_pred CCEEE-cCCCCcc--eeeecCCceeeecCCCCChHHHHHHHHHHh
Q 023290 197 LPVLG-TAAGGTT--EIVVNGTTGLLHPVGKEGITPLAKNIVKLA 238 (284)
Q Consensus 197 ~Pvi~-~~~~~~~--e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~ 238 (284)
+|+|+ +|.++.+ +.+++.+-|+++-..| .+..+=++++
T Consensus 88 iP~IvI~D~p~~K~~d~l~~~g~GYIivk~D----pMIGArREFL 128 (277)
T PRK00994 88 IPCIVIGDAPGKKVKDAMEEQGLGYIIVKAD----PMIGARREFL 128 (277)
T ss_pred CCEEEEcCCCccchHHHHHhcCCcEEEEecC----ccccchhhcc
Confidence 89885 5555542 4555666787766644 3444444444
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=84.31 E-value=26 Score=30.79 Aligned_cols=45 Identities=4% Similarity=-0.042 Sum_probs=29.4
Q ss_pred cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCccee
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEI 210 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~ 210 (284)
+++...+..||+++..+.+ +-++. ...+.-+.|.+.-|.+-.+++
T Consensus 234 ~~l~~~l~~aDiVI~aT~a---~~~vi-~~~~~~~~~~~~iDLavPRdi 278 (414)
T PRK13940 234 SELPQLIKKADIIIAAVNV---LEYIV-TCKYVGDKPRVFIDISIPQAL 278 (414)
T ss_pred HHHHHHhccCCEEEECcCC---CCeeE-CHHHhCCCCeEEEEeCCCCCC
Confidence 4667788999999987752 22222 233445789888887665554
|
|
| >cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins | Back alignment and domain information |
|---|
Probab=84.18 E-value=14 Score=28.84 Aligned_cols=86 Identities=14% Similarity=0.144 Sum_probs=54.5
Q ss_pred CCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEec---cccCHHHHHhhccEEEEcCCC-------CcCc-cchhH
Q 023290 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN---KTLTVAPYLAAIDVLVQNSQA-------WGEC-FGRIT 189 (284)
Q Consensus 121 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~---~~~~~~~~~~~ad~~~~ps~~-------~~e~-~~~~~ 189 (284)
...++.++.........+.+.+.+..+++|........- ..+++.+.+.+||+++++.-. |.+. .--.+
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~~~~~i 107 (210)
T cd03129 28 AGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGNQLRLLSVLRETPLLDAI 107 (210)
T ss_pred CCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCcHHHHHHHHHhCChHHHH
Confidence 456777776654434446777888888888753322221 226778899999999987421 1222 22246
Q ss_pred HHHHhcCCCEEEcCCCC
Q 023290 190 IEAMAFQLPVLGTAAGG 206 (284)
Q Consensus 190 ~Eama~G~Pvi~~~~~~ 206 (284)
.+...-|+|++.+..|.
T Consensus 108 ~~~~~~G~v~~G~SAGA 124 (210)
T cd03129 108 LKRVARGVVIGGTSAGA 124 (210)
T ss_pred HHHHHcCCeEEEcCHHH
Confidence 77888899999876543
|
Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from |
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=84.14 E-value=0.88 Score=33.76 Aligned_cols=20 Identities=15% Similarity=0.119 Sum_probs=10.7
Q ss_pred hcccCCCeEEEecCCccccc
Q 023290 39 LRIKMPDTYVVHLGNSKELM 58 (284)
Q Consensus 39 ~~~~~~~i~vi~~g~~~~~~ 58 (284)
+|+++.++.||+||+|.+.|
T Consensus 157 ~~~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 157 FGIPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp HT--SS-EEE----B-CCCH
T ss_pred hCCcccCCEEEECCccHHHc
Confidence 89999999999999999876
|
|
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=83.23 E-value=30 Score=30.11 Aligned_cols=113 Identities=12% Similarity=0.128 Sum_probs=67.2
Q ss_pred HHHHHHHhC-C-----CCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHH
Q 023290 71 REHVRESLG-V-----RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRN 144 (284)
Q Consensus 71 ~~~~r~~~~-~-----~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~ 144 (284)
+..+.++|| . ++...+.+...++.+-.-...+++++.+ ++|++.+++....+ .-.+.
T Consensus 31 ~~r~~eRfg~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~----------~~P~~~ilvTt~T~-------Tg~e~ 93 (419)
T COG1519 31 RKRLGERFGFYKPPVKPEGPLVWIHAASVGEVLAALPLVRALRE----------RFPDLRILVTTMTP-------TGAER 93 (419)
T ss_pred HHHHHHHhcccCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHH----------hCCCCCEEEEecCc-------cHHHH
Confidence 344555555 1 2234666777777765544444444433 45899888876433 22233
Q ss_pred HHHHcCCCCcEEEeccc--cCHHHHH--hhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcC
Q 023290 145 YVMQKKIQDRVHFVNKT--LTVAPYL--AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA 203 (284)
Q Consensus 145 ~~~~~~~~~~v~~~~~~--~~~~~~~--~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~ 203 (284)
..+.++....+.+++.. .-+..++ -..|++|..= .|-+|+.+.|+-..|+|++.-+
T Consensus 94 a~~~~~~~v~h~YlP~D~~~~v~rFl~~~~P~l~Ii~E---tElWPnli~e~~~~~~p~~LvN 153 (419)
T COG1519 94 AAALFGDSVIHQYLPLDLPIAVRRFLRKWRPKLLIIME---TELWPNLINELKRRGIPLVLVN 153 (419)
T ss_pred HHHHcCCCeEEEecCcCchHHHHHHHHhcCCCEEEEEe---ccccHHHHHHHHHcCCCEEEEe
Confidence 33444433345555542 2334444 4667777654 6889999999999999999764
|
|
| >KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=81.73 E-value=34 Score=29.61 Aligned_cols=167 Identities=11% Similarity=0.142 Sum_probs=93.0
Q ss_pred EeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCC--hHHHHHHHHHHHHcCCCCcEEEe-ccc----
Q 023290 89 IINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ--TKFESELRNYVMQKKIQDRVHFV-NKT---- 161 (284)
Q Consensus 89 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~--~~~~~~l~~~~~~~~~~~~v~~~-~~~---- 161 (284)
|.|+...-+-.....+.+.++.+ .++.++|+-...... ....+++.+..+..+ |+.|.|. +..
T Consensus 159 ~ygsyte~dpv~ia~egv~~fKk---------e~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai~-Pd~vi~VmDasiGQa 228 (483)
T KOG0780|consen 159 FYGSYTEADPVKIASEGVDRFKK---------ENFDVIIVDTSGRHKQEASLFEEMKQVSKAIK-PDEIIFVMDASIGQA 228 (483)
T ss_pred eEecccccchHHHHHHHHHHHHh---------cCCcEEEEeCCCchhhhHHHHHHHHHHHhhcC-CCeEEEEEeccccHh
Confidence 45666666667777777777765 778888875432211 224566666666554 5566654 321
Q ss_pred --cCHHHHHhhccE--EEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecC----CceeeecCCCCChHHHHHH
Q 023290 162 --LTVAPYLAAIDV--LVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG----TTGLLHPVGKEGITPLAKN 233 (284)
Q Consensus 162 --~~~~~~~~~ad~--~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~----~~g~~~~~~d~~~~~~~~~ 233 (284)
+....+=...|+ +|++-...+.-.|.++.--.+.++||+---.|.--+-++.- -.+-+.--+| ++.+.+.
T Consensus 229 ae~Qa~aFk~~vdvg~vIlTKlDGhakGGgAlSaVaaTksPIiFIGtGEhmdDlE~F~pk~FvsrlLGmGD--i~glvek 306 (483)
T KOG0780|consen 229 AEAQARAFKETVDVGAVILTKLDGHAKGGGALSAVAATKSPIIFIGTGEHMDDLEPFDPKPFVSRLLGMGD--IEGLVEK 306 (483)
T ss_pred HHHHHHHHHHhhccceEEEEecccCCCCCceeeehhhhCCCEEEEecCccccccCCCChHHHHHHHhcccc--HHHHHHH
Confidence 233344456666 34443211111122333334679999976555433322221 1122344566 8999999
Q ss_pred HHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 023290 234 IVKLAT-HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 234 i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (284)
+.++.. |. .++.++.. ..+|+...+.+++.++.+
T Consensus 307 ~~ev~~~d~---~el~~kl~---~gkFtlrd~y~Qfq~imk 341 (483)
T KOG0780|consen 307 VQEVGKDDA---KELVEKLK---QGKFTLRDFYDQFQNIMK 341 (483)
T ss_pred HHHHhhhhH---HHHHHHHH---hCCccHHHHHHHHHHHHh
Confidence 999873 32 23333332 257898888888887764
|
|
| >PRK05583 ribosomal protein L7Ae family protein; Provisional | Back alignment and domain information |
|---|
Probab=80.45 E-value=15 Score=25.21 Aligned_cols=78 Identities=10% Similarity=0.150 Sum_probs=49.6
Q ss_pred cHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhccEEEEc
Q 023290 98 GQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQN 177 (284)
Q Consensus 98 ~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad~~~~p 177 (284)
|.+.++++++. ..++++|+..+-++ ...+.+.+.++..+++ +...+..+++...+....+.+..
T Consensus 21 G~~~v~~aik~------------gk~~lVI~A~D~s~--~~kkki~~~~~~~~vp--~~~~~t~~eLg~a~Gk~~~~~ia 84 (104)
T PRK05583 21 GYNKCEEAIKK------------KKVYLIIISNDISE--NSKNKFKNYCNKYNIP--YIEGYSKEELGNAIGRDEIKILG 84 (104)
T ss_pred cHHHHHHHHHc------------CCceEEEEeCCCCH--hHHHHHHHHHHHcCCC--EEEecCHHHHHHHhCCCCeEEEE
Confidence 45566666544 67888888775433 3678888888887765 33335557888888765555444
Q ss_pred CCCCcCccchhHHHHH
Q 023290 178 SQAWGECFGRITIEAM 193 (284)
Q Consensus 178 s~~~~e~~~~~~~Eam 193 (284)
-. .+++.-.+++.+
T Consensus 85 i~--d~g~a~~l~~~~ 98 (104)
T PRK05583 85 VK--DKNMAKKLLKLW 98 (104)
T ss_pred Ee--ChHHHHHHHHHH
Confidence 43 566666666654
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 284 | ||||
| 2jjm_A | 394 | Crystal Structure Of A Family Gt4 Glycosyltransfera | 4e-11 | ||
| 3mbo_A | 414 | Crystal Structure Of The Glycosyltransferase Babsha | 4e-11 | ||
| 2x6q_A | 416 | Crystal Structure Of Trehalose Synthase Tret From P | 8e-05 | ||
| 3s28_A | 816 | The Crystal Structure Of Sucrose Synthase-1 In Comp | 9e-05 | ||
| 2xmp_A | 416 | Crystal Structure Of Trehalose Synthase Tret Mutant | 1e-04 | ||
| 3s27_A | 816 | The Crystal Structure Of Sucrose Synthase-1 From Ar | 5e-04 |
| >pdb|2JJM|A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. Length = 394 | Back alignment and structure |
|
| >pdb|3MBO|A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate Length = 414 | Back alignment and structure |
|
| >pdb|2X6Q|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshi Length = 416 | Back alignment and structure |
|
| >pdb|3S28|A Chain A, The Crystal Structure Of Sucrose Synthase-1 In Complex With A Breakdown Product Of The Udp-Glucose Length = 816 | Back alignment and structure |
|
| >pdb|2XMP|A Chain A, Crystal Structure Of Trehalose Synthase Tret Mutant E326a From P.Horishiki In Complex With Udp Length = 416 | Back alignment and structure |
|
| >pdb|3S27|A Chain A, The Crystal Structure Of Sucrose Synthase-1 From Arabidopsis Thaliana And Its Functional Implications. Length = 816 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 2e-32
Identities = 50/211 (23%), Positives = 80/211 (37%), Gaps = 18/211 (8%)
Query: 71 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS 130
+ E V E + ++ KG + + + E ++P V +++G
Sbjct: 218 ILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKE-------KIPGVQLLLVGV 270
Query: 131 ----DMNAQTKFESELRNYVMQKKIQDRVHFVNK-TLTVAPYLAAIDVLVQNSQAWGECF 185
D FE LR ++ + + V + A DV++Q S E F
Sbjct: 271 MAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMS--IREGF 328
Query: 186 GRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRL 245
G EAM PV+G A GG +V+G TG L E + ++ L H E
Sbjct: 329 GLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVRDANE----AVEVVLYLLKHPEVSK 384
Query: 246 TMGKRGYERVKEIFQEHHMAERIAVVLKEVL 276
MG + ERV++ F ER +L +
Sbjct: 385 EMGAKAKERVRKNFIITKHMERYLDILNSLG 415
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 7e-32
Identities = 59/259 (22%), Positives = 106/259 (40%), Gaps = 28/259 (10%)
Query: 25 HVTA--EYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRN 82
VTA N T E ++ D V+ + + + +++ G+
Sbjct: 159 VVTAVSHSLINETHELVKPN-KDIQTVYNFIDERVYFKRD--------MTQLKKEYGISE 209
Query: 83 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESEL 142
+ + I++ + K + +F + + + +++G +
Sbjct: 210 SEKILIHISNFRKVKRVQDVVQAFAKIVTEVD--------AKLLLVGD-----GPEFCTI 256
Query: 143 RNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT 202
V I+DRV F+ K VA LA D+++ S E FG + +EAMA +P +GT
Sbjct: 257 LQLVKNLHIEDRVLFLGKQDNVAELLAMSDLMLLLS--EKESFGLVLLEAMACGVPCIGT 314
Query: 203 AAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEH 262
GG E++ +G TG L VG T +A ++L E MG+R E V E F+
Sbjct: 315 RVGGIPEVIQHGDTGYLCEVGD--TTGVADQAIQLLKDEELHRNMGERARESVYEQFRSE 372
Query: 263 HMAERIAVVLKEVLKKSKS 281
+ + + +VL+ K+
Sbjct: 373 KIVSQYETIYYDVLRDDKN 391
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 1e-26
Identities = 37/206 (17%), Positives = 74/206 (35%), Gaps = 16/206 (7%)
Query: 71 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS 130
RE R+ G++ + L + S KG D + + E + + +
Sbjct: 183 REIYRQKNGIKEQQNLLLQVGSDFGRKGVDRSIEALASLPE-------SLRHNTLLFVVG 235
Query: 131 DMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITI 190
+ + + ++ VHF + V+ +AA D+L+ + + E G + +
Sbjct: 236 QDKPR-----KFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLLHPA--YQEAAGIVLL 288
Query: 191 EAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKR 250
EA+ LPVL TA G + + G + L + + K T R+ +
Sbjct: 289 EAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFS-QEQLNEVLRKALTQSPLRMAWAEN 347
Query: 251 GYERVKEIFQEHHMAERIAVVLKEVL 276
+ + E+ A ++ L
Sbjct: 348 ARHYADT-QDLYSLPEKAADIITGGL 372
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 5e-24
Identities = 49/215 (22%), Positives = 87/215 (40%), Gaps = 24/215 (11%)
Query: 71 REHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS 130
+ R+ LG + + A + + KGQD + +++ + P +I+GS
Sbjct: 185 KSATRKKLGFTDTTPVIACNSRLVPRKGQDSLI----KAMPQVIA---ARPDAQLLIVGS 237
Query: 131 DMNAQTKFESELRNYVMQKKIQDRVHFVNK--TLTVAPYLAAIDVLV-----QNSQAWGE 183
++ES LR + V F+ + + LAA D+ + E
Sbjct: 238 G-----RYESTLRRLA--TDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVE 290
Query: 184 CFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVER 243
G + +EA A +PV+ +GG E V TGL+ L++ +++L R
Sbjct: 291 GLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSDVD--KLSELLIELLDDPIR 347
Query: 244 RLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKK 278
R MG G V+ + M ER+ +L+ +K
Sbjct: 348 RAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRK 382
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 2e-20
Identities = 42/216 (19%), Positives = 77/216 (35%), Gaps = 15/216 (6%)
Query: 68 RVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVI 127
E R LG+ + A + + KG + + + + ++ L V +I
Sbjct: 227 DRATERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRV-----II 281
Query: 128 IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLT---VAPYLAAIDVLVQNSQAWGEC 184
G + R+ + ++ R+ F+ + A D++ S + E
Sbjct: 282 CGGPSGPNATPD-TYRHMAEELGVEKRIRFL-DPRPPSELVAVYRAADIVAVPS--FNES 337
Query: 185 FGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERR 244
FG + +EA A PV+ GG V G TGLL A + L E R
Sbjct: 338 FGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPH--AWADALATLLDDDETR 395
Query: 245 LTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSK 280
+ MG+ E + F A +++ + + +
Sbjct: 396 IRMGEDAVEHART-FSWAATAAQLSSLYNDAIANEN 430
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 8e-20
Identities = 24/172 (13%), Positives = 51/172 (29%), Gaps = 21/172 (12%)
Query: 97 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVH 156
K Q + + + L K K + ++ G E +++ + ++
Sbjct: 15 KNQSVLIKAV----ALSKYK----QDIVLLLKGKG-----PDEKKIKLLAQKLGVKAEFG 61
Query: 157 FVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQL-PVLGTAAGGTTEIVVNGT 215
FVN + L + V + E +EA++ + PV+ + T
Sbjct: 62 FVNSN-ELLEILKTCTLYVHAANV--ESEAIACLEAISVGIVPVIANSPLSATRQFALDE 118
Query: 216 TGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAER 267
L P L+ I + R M + + + +
Sbjct: 119 RSLFEP---NNAKDLSAKIDWWLENKLERERMQNEYAKSALN-YTLENSVIQ 166
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 87.3 bits (216), Expect = 1e-19
Identities = 40/229 (17%), Positives = 82/229 (35%), Gaps = 25/229 (10%)
Query: 62 EDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVP 121
E+ + V + L + + +LF + + R K + + ++ L
Sbjct: 551 EELLYSDVENKEHLCVLKDKKKPILFTM-ARLDRVKNLSGLVEWYGKNTRL-------RE 602
Query: 122 SVHAVIIG------SDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAP-------YL 168
+ V++G S N + ++ + + + K+ + +++ +
Sbjct: 603 LANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYIC 662
Query: 169 AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPV--GKEG 226
VQ + E FG +EAM LP T GG EI+V+G +G G +
Sbjct: 663 DTKGAFVQPA--LYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQA 720
Query: 227 ITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEV 275
LA K + K G +R++E + ++R+ +
Sbjct: 721 ADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 84.6 bits (210), Expect = 8e-19
Identities = 38/183 (20%), Positives = 68/183 (37%), Gaps = 23/183 (12%)
Query: 97 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS-DMNAQTKFESELRNYVMQKKIQDRV 155
KG + L +L + P V +I+G D + + +L +
Sbjct: 222 KGMAVLL----AALPKLVA---RFPDVEILIVGRGDEDELREQAGDLA---------GHL 265
Query: 156 HFVNK--TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN 213
F+ + T A + + DV GE FG + +EAMA V+ + ++ +
Sbjct: 266 RFLGQVDDATKASAMRSADVYCAPHL-GGESFGIVLVEAMAAGTAVVASDLDAFRRVLAD 324
Query: 214 GTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK 273
G G L PV +A ++ + + R R ERV + ++ +I V +
Sbjct: 325 GDAGRLVPVDDAD--GMAAALIGILEDDQLRAGYVARASERVHR-YDWSVVSAQIMRVYE 381
Query: 274 EVL 276
V
Sbjct: 382 TVS 384
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 80.9 bits (200), Expect = 2e-17
Identities = 44/244 (18%), Positives = 90/244 (36%), Gaps = 19/244 (7%)
Query: 48 VVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSR---GKGQDLFLH 104
V+ G + + + + K + +++ LG +L I + SR K +
Sbjct: 225 VIPPGVNTRVFDGEYGDKIKAKITKYLERDLGSERMEL--PAIIASSRLDQKKNHYGLVE 282
Query: 105 SFYESLELIKEKKLEV----PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHF--- 157
++ ++ EL + L + + + ++ + + +V
Sbjct: 283 AYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPL 342
Query: 158 VNKTLTVAPY---LAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG 214
++ Y + V S + E FG +EAMA LP + T GG EI+ G
Sbjct: 343 NSQQELAGCYAYLASKGSVFALTS--FYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGG 400
Query: 215 TTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 274
G+L +A+ ++K E ++G +RV+E + A V++E
Sbjct: 401 KYGVLVDPEDPE--DIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQE 458
Query: 275 VLKK 278
+ +
Sbjct: 459 IADR 462
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 78.3 bits (192), Expect = 1e-16
Identities = 41/257 (15%), Positives = 78/257 (30%), Gaps = 19/257 (7%)
Query: 42 KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDL 101
K + + + G + V+ K + L N+D+LF +N + K D+
Sbjct: 142 KCWISDICNYGCKVPINIVSHFVDTKTIYDARKLVGLSEYNDDVLFLNMNRNTARKRLDI 201
Query: 102 FLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 161
++ + + + K+ D+++ E +++
Sbjct: 202 YVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTV 261
Query: 162 LT---VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGL 218
LT V A DV+V S GE FG + E P++ +A GG +
Sbjct: 262 LTDERVDMMYNACDVIVNCS--SGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYK 319
Query: 219 LHPVGKEGITPL--------------AKNIVKLATHVERRLTMGKRGYERVKEIFQEHHM 264
+ P + + R GKR + VK +
Sbjct: 320 IKPSAWISVDDRDGIGGIEGIIDVDDLVEAFTFFKDEKNRKEYGKRVQDFVKTKPTWDDI 379
Query: 265 AERIAVVLKEVLKKSKS 281
+ I +L+
Sbjct: 380 SSDIIDFFNSLLRVESR 396
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 72.6 bits (179), Expect = 8e-16
Identities = 38/181 (20%), Positives = 69/181 (38%), Gaps = 28/181 (15%)
Query: 81 RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIG--SDMNAQTKF 138
+ + +N + K +L L F + ++++KL I+G S + ++
Sbjct: 20 KCYGDFWLSVNRIYPEKRIELQLEVFKK----LQDEKL-------YIVGWFSKGDHAERY 68
Query: 139 ESELRNYVMQKKIQDRVHFVNK--TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQ 196
++ K D V F+ + + L+ + E FG IEAMA
Sbjct: 69 ARKIM-----KIAPDNVKFLGSVSEEELIDLYSRCKGLLCTA--KDEDFGLTPIEAMASG 121
Query: 197 LPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVK 256
PV+ GG E V+N TG L + + K++ + ++ K + R K
Sbjct: 122 KPVIAVNEGGFKETVINEKTGYLVNADVNE---IIDAMKKVSKNPDK---FKKDCFRRAK 175
Query: 257 E 257
E
Sbjct: 176 E 176
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 66.3 bits (161), Expect = 1e-12
Identities = 28/192 (14%), Positives = 53/192 (27%), Gaps = 26/192 (13%)
Query: 85 LLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRN 144
+L SV R L + E+L++ +K + +G
Sbjct: 244 ILVYGRPSVKR-NAFTLIV----EALKIFVQKYDRSNEWKIISVGEKHKD---------- 288
Query: 145 YVMQKKIQDRVHFVNK--TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT 202
+ ++ + K A L + + + +E F L V+
Sbjct: 289 --IALGKGIHLNSLGKLTLEDYADLLKRSSIGISLMIS--PHPSYPPLEMAHFGLRVITN 344
Query: 203 AAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEI--FQ 260
+ L + E +A+ +V+L R K + I F
Sbjct: 345 KYENKDLSNWHSNIVSLEQLNPEN---IAETLVELCMSFNNRDVDKKESSNMMFYINEFN 401
Query: 261 EHHMAERIAVVL 272
E + I L
Sbjct: 402 EFSFIKEIEEKL 413
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 3e-08
Identities = 21/134 (15%), Positives = 36/134 (26%), Gaps = 19/134 (14%)
Query: 153 DRVHFVNK--TLTVAPYLAAIDVLV--------QNSQAWGECFGRITIEAMAFQLPVLGT 202
V + + LA+ ++ W E + EA PV+GT
Sbjct: 212 STVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGT 271
Query: 203 AAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEH 262
G EIV + + + A L ++
Sbjct: 272 GNGCLAEIVPSVGEVVGYGTD---------FAPDEARRTLAGLPASDEVRRAAVRLWGHV 322
Query: 263 HMAERIAVVLKEVL 276
+AER + +L
Sbjct: 323 TIAERYVEQYRRLL 336
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.5 bits (117), Expect = 8e-07
Identities = 27/164 (16%), Positives = 54/164 (32%), Gaps = 37/164 (22%)
Query: 11 VKHLPLV---AGAMI-DSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVA 66
+ P I D T + WK+ ++L + ++ + L E ++ +
Sbjct: 323 LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTII-ESSLNVL-EPAEYRKMFDRLS- 379
Query: 67 KRVLREHV----------------RESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESL 110
V + + V N+ ++++ + K + + S Y L
Sbjct: 380 --VFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE--KQPKESTISIPSIY--L 433
Query: 111 ELIKEKKLEVPSVHAVIIGSDMNAQTKFESE------LRNYVMQ 148
EL K K ++H I+ N F+S+ L Y
Sbjct: 434 EL-KVKLENEYALHRSIVDHY-NIPKTFDSDDLIPPYLDQYFYS 475
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 284 | |||
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 100.0 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 100.0 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 100.0 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 100.0 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 100.0 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 100.0 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 100.0 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 100.0 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 100.0 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 100.0 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 100.0 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 100.0 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 100.0 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 99.98 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 99.98 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 99.97 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 99.96 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 99.96 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 99.96 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.96 | |
| 3t5t_A | 496 | Putative glycosyltransferase; GTB fold, pseudoglyc | 99.95 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 99.95 | |
| 2hy7_A | 406 | Glucuronosyltransferase GUMK; glycosyltransferases | 99.94 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.94 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 99.93 | |
| 1f0k_A | 364 | MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe | 99.93 | |
| 2xci_A | 374 | KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci | 99.92 | |
| 1v4v_A | 376 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t | 99.86 | |
| 3rhz_A | 339 | GTF3, nucleotide sugar synthetase-like protein; gl | 99.79 | |
| 3dzc_A | 396 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.78 | |
| 3ot5_A | 403 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 99.74 | |
| 3otg_A | 412 | CALG1; calicheamicin, TDP, structural genomics, PS | 99.66 | |
| 3s2u_A | 365 | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape | 99.64 | |
| 3q3e_A | 631 | HMW1C-like glycosyltransferase; N-glycosylation; 2 | 99.56 | |
| 2iyf_A | 430 | OLED, oleandomycin glycosyltransferase; antibiotic | 99.55 | |
| 4hwg_A | 385 | UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc | 99.55 | |
| 4fzr_A | 398 | SSFS6; structural genomics, PSI-biology, protein s | 99.51 | |
| 3tsa_A | 391 | SPNG, NDP-rhamnosyltransferase; glycosyltransferas | 99.5 | |
| 3oti_A | 398 | CALG3; calicheamicin, TDP, structural genomics, PS | 99.46 | |
| 2p6p_A | 384 | Glycosyl transferase; X-RAY-diffraction,urdamycina | 99.45 | |
| 2o6l_A | 170 | UDP-glucuronosyltransferase 2B7; drug metabolism, | 99.43 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 99.4 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 99.4 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 99.38 | |
| 3ia7_A | 402 | CALG4; glycosysltransferase, calicheamicin, enediy | 99.38 | |
| 2yjn_A | 441 | ERYCIII, glycosyltransferase; transferase, cytochr | 99.36 | |
| 3rsc_A | 415 | CALG2; TDP, enediyne, structural genomics, PSI-2, | 99.31 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.3 | |
| 2iya_A | 424 | OLEI, oleandomycin glycosyltransferase; carbohydra | 99.16 | |
| 1iir_A | 415 | Glycosyltransferase GTFB; rossmann fold; 1.80A {Am | 99.09 | |
| 3h4t_A | 404 | Glycosyltransferase GTFA, glycosyltransferase; van | 98.96 | |
| 1rrv_A | 416 | Glycosyltransferase GTFD; GT-B, glycosyltransferas | 98.92 | |
| 4amg_A | 400 | Snogd; transferase, polyketide biosynthesis, GT1 f | 98.8 | |
| 3hbm_A | 282 | UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je | 98.23 | |
| 3l7i_A | 729 | Teichoic acid biosynthesis protein F; GT-B fold, m | 98.17 | |
| 2c1x_A | 456 | UDP-glucose flavonoid 3-O glycosyltransferase; WIN | 98.11 | |
| 3hbf_A | 454 | Flavonoid 3-O-glucosyltransferase; glycosyltransfe | 98.05 | |
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 98.01 | |
| 2pq6_A | 482 | UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl | 97.99 | |
| 1psw_A | 348 | ADP-heptose LPS heptosyltransferase II; structural | 97.71 | |
| 2acv_A | 463 | Triterpene UDP-glucosyl transferase UGT71G1; glyco | 97.7 | |
| 2vch_A | 480 | Hydroquinone glucosyltransferase; glycosyltransfer | 97.68 | |
| 2jzc_A | 224 | UDP-N-acetylglucosamine transferase subunit ALG13; | 97.58 | |
| 3tov_A | 349 | Glycosyl transferase family 9; structural genomics | 97.18 | |
| 2gt1_A | 326 | Lipopolysaccharide heptosyltransferase-1; GT-B fol | 96.47 | |
| 3kht_A | 144 | Response regulator; PSI-II, 11023K, structural gen | 88.75 | |
| 3jte_A | 143 | Response regulator receiver protein; structural ge | 87.2 | |
| 1k68_A | 140 | Phytochrome response regulator RCPA; phosphorylate | 87.11 | |
| 3heb_A | 152 | Response regulator receiver domain protein (CHEY); | 86.62 | |
| 2zay_A | 147 | Response regulator receiver protein; structural ge | 86.47 | |
| 1ydw_A | 362 | AX110P-like protein; structural genomics, protein | 84.27 | |
| 1k66_A | 149 | Phytochrome response regulator RCPB; CHEY homologu | 83.16 | |
| 4had_A | 350 | Probable oxidoreductase protein; structural genomi | 83.12 | |
| 3cg4_A | 142 | Response regulator receiver domain protein (CHEY-; | 82.12 | |
| 2pln_A | 137 | HP1043, response regulator; signaling protein; 1.8 | 82.03 | |
| 3ilh_A | 146 | Two component response regulator; NYSGXRC, PSI-II, | 81.97 | |
| 1fy2_A | 229 | Aspartyl dipeptidase; serine protease, catalytic t | 81.92 | |
| 3h5i_A | 140 | Response regulator/sensory box protein/ggdef domai | 81.67 | |
| 3e9m_A | 330 | Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, | 81.3 | |
| 1rcu_A | 195 | Conserved hypothetical protein VT76; structural ge | 81.3 | |
| 3hzh_A | 157 | Chemotaxis response regulator (CHEY-3); phosphatas | 81.13 | |
| 4fb5_A | 393 | Probable oxidoreductase protein; PSI-biology, nysg | 81.09 | |
| 3lua_A | 140 | Response regulator receiver protein; two-component | 80.73 | |
| 1qv9_A | 283 | F420-dependent methylenetetrahydromethanopterin de | 80.19 |
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-38 Score=269.50 Aligned_cols=239 Identities=23% Similarity=0.320 Sum_probs=209.0
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEec
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g 91 (284)
..++.+|.+++.|....+.+.+. ++. ..++.++|||+|.+.+.+.. +..++++++++++.++++++|
T Consensus 152 ~~~~~ad~ii~~s~~~~~~~~~~----~~~-~~~~~vi~ngv~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~G 218 (394)
T 2jjm_A 152 FGIEQSDVVTAVSHSLINETHEL----VKP-NKDIQTVYNFIDERVYFKRD--------MTQLKKEYGISESEKILIHIS 218 (394)
T ss_dssp HHHHHSSEEEESCHHHHHHHHHH----TCC-SSCEEECCCCCCTTTCCCCC--------CHHHHHHTTCC---CEEEEEC
T ss_pred HHHhhCCEEEECCHHHHHHHHHh----hCC-cccEEEecCCccHHhcCCcc--------hHHHHHHcCCCCCCeEEEEee
Confidence 44667999999999988875543 433 57899999999988776543 255778899877889999999
Q ss_pred cccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhc
Q 023290 92 SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAI 171 (284)
Q Consensus 92 ~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~a 171 (284)
++.+.||++.+++|+..+.+ + ++++|+++|.++ ..+.+++.++++++.++|.|+|+.+++..+|+.|
T Consensus 219 ~~~~~Kg~~~li~a~~~l~~-------~-~~~~l~i~G~g~-----~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~a 285 (394)
T 2jjm_A 219 NFRKVKRVQDVVQAFAKIVT-------E-VDAKLLLVGDGP-----EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMS 285 (394)
T ss_dssp CCCGGGTHHHHHHHHHHHHH-------S-SCCEEEEECCCT-----THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTC
T ss_pred ccccccCHHHHHHHHHHHHh-------h-CCCEEEEECCch-----HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhC
Confidence 99999999999999998865 2 578999999876 5688999999999989999999989999999999
Q ss_pred cEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHH
Q 023290 172 DVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRG 251 (284)
Q Consensus 172 d~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~ 251 (284)
|++++||. .|++|++++|||+||+|||+++.++..+++.++.+|++++++| +++++++|.++++|++.++++++++
T Consensus 286 dv~v~ps~--~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~~~~d--~~~la~~i~~l~~~~~~~~~~~~~~ 361 (394)
T 2jjm_A 286 DLMLLLSE--KESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLCEVGD--TTGVADQAIQLLKDEELHRNMGERA 361 (394)
T ss_dssp SEEEECCS--CCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEECTTC--HHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred CEEEeccc--cCCCchHHHHHHhcCCCEEEecCCChHHHhhcCCceEEeCCCC--HHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999 8999999999999999999999999999999999999999988 9999999999999999999999999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHhhc
Q 023290 252 YERVKEIFQEHHMAERIAVVLKEVLKKSK 280 (284)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (284)
++.+.+.|+|+.+++++.++|++++++.+
T Consensus 362 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 390 (394)
T 2jjm_A 362 RESVYEQFRSEKIVSQYETIYYDVLRDDK 390 (394)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHhhhh
Confidence 99998899999999999999999987654
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=269.35 Aligned_cols=250 Identities=18% Similarity=0.269 Sum_probs=213.9
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEec
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g 91 (284)
..++.+|.++++|....+.+.+ .+|.+..++.+||||+|.+.+.+.... .+..++++++++++.++|+++|
T Consensus 180 ~~~~~~d~ii~~s~~~~~~~~~----~~g~~~~k~~vi~ngvd~~~~~~~~~~-----~~~~~r~~~~~~~~~~~i~~~G 250 (438)
T 3c48_A 180 QLVDNADVLAVNTQEEMQDLMH----HYDADPDRISVVSPGADVELYSPGNDR-----ATERSRRELGIPLHTKVVAFVG 250 (438)
T ss_dssp HHHHHCSEEEESSHHHHHHHHH----HHCCCGGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEES
T ss_pred HHHhcCCEEEEcCHHHHHHHHH----HhCCChhheEEecCCccccccCCcccc-----hhhhhHHhcCCCCCCcEEEEEe
Confidence 3456799999999988887544 478888899999999998877654321 0244788999988899999999
Q ss_pred cccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHh
Q 023290 92 SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLA 169 (284)
Q Consensus 92 ~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~ 169 (284)
++.+.||++.+++++..+.+..+ ..+++|+++|.... .....+.++++++++++.++|.|+|++ +++..+|+
T Consensus 251 ~~~~~Kg~~~li~a~~~l~~~~p-----~~~~~l~i~G~~~~-~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~ 324 (438)
T 3c48_A 251 RLQPFKGPQVLIKAVAALFDRDP-----DRNLRVIICGGPSG-PNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYR 324 (438)
T ss_dssp CBSGGGCHHHHHHHHHHHHHHCT-----TCSEEEEEECCBC-------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHH
T ss_pred eecccCCHHHHHHHHHHHHhhCC-----CcceEEEEEeCCCC-CCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHH
Confidence 99999999999999999866321 02899999998211 012668899999999999999999998 78999999
Q ss_pred hccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHH
Q 023290 170 AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGK 249 (284)
Q Consensus 170 ~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~ 249 (284)
.||++++||. .|+||++++|||+||+|||+++.++..+++.++.+|++++++| +++++++|.++++|++.+.++++
T Consensus 325 ~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d--~~~la~~i~~l~~~~~~~~~~~~ 400 (438)
T 3c48_A 325 AADIVAVPSF--NESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHS--PHAWADALATLLDDDETRIRMGE 400 (438)
T ss_dssp HCSEEEECCS--CCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCC--HHHHHHHHHHHHHCHHHHHHHHH
T ss_pred hCCEEEECcc--ccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEECCCCC--HHHHHHHHHHHHcCHHHHHHHHH
Confidence 9999999998 8999999999999999999999999999999999999999988 99999999999999999999999
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHhhcC
Q 023290 250 RGYERVKEIFQEHHMAERIAVVLKEVLKKSKS 281 (284)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (284)
++++.+.+ |+|+.+++++.++|++++++.+.
T Consensus 401 ~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~~~ 431 (438)
T 3c48_A 401 DAVEHART-FSWAATAAQLSSLYNDAIANENV 431 (438)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHh-CCHHHHHHHHHHHHHHHhhhccc
Confidence 99999988 99999999999999999987643
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=264.92 Aligned_cols=240 Identities=24% Similarity=0.328 Sum_probs=210.8
Q ss_pred ccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEe
Q 023290 11 VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII 90 (284)
Q Consensus 11 ~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~ 90 (284)
...++.+|.+++.|....+.+.+. ++ ..+++.++|||+|.+.+.+.... .+..++++++++++.++++++
T Consensus 135 ~~~~~~~d~ii~~s~~~~~~~~~~----~~-~~~~~~vi~ngv~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~ 204 (394)
T 3okp_A 135 RKIGTEVDVLTYISQYTLRRFKSA----FG-SHPTFEHLPSGVDVKRFTPATPE-----DKSATRKKLGFTDTTPVIACN 204 (394)
T ss_dssp HHHHHHCSEEEESCHHHHHHHHHH----HC-SSSEEEECCCCBCTTTSCCCCHH-----HHHHHHHHTTCCTTCCEEEEE
T ss_pred HHHHHhCCEEEEcCHHHHHHHHHh----cC-CCCCeEEecCCcCHHHcCCCCch-----hhHHHHHhcCCCcCceEEEEE
Confidence 345678999999999988876553 43 45789999999999877652221 147789999999888999999
Q ss_pred ccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHH
Q 023290 91 NSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYL 168 (284)
Q Consensus 91 g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~ 168 (284)
|++.+.||++.+++++..+.+ +.++++|+|+|.++ ..+.+++++ .++.++|.++|++ +++..+|
T Consensus 205 G~~~~~Kg~~~li~a~~~l~~-------~~~~~~l~i~G~g~-----~~~~l~~~~--~~~~~~v~~~g~~~~~~~~~~~ 270 (394)
T 3okp_A 205 SRLVPRKGQDSLIKAMPQVIA-------ARPDAQLLIVGSGR-----YESTLRRLA--TDVSQNVKFLGRLEYQDMINTL 270 (394)
T ss_dssp SCSCGGGCHHHHHHHHHHHHH-------HSTTCEEEEECCCT-----THHHHHHHT--GGGGGGEEEEESCCHHHHHHHH
T ss_pred eccccccCHHHHHHHHHHHHh-------hCCCeEEEEEcCch-----HHHHHHHHH--hcccCeEEEcCCCCHHHHHHHH
Confidence 999999999999999998876 33899999999876 567777777 5667899999998 8999999
Q ss_pred hhccEEEEcCCCCc-------CccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCH
Q 023290 169 AAIDVLVQNSQAWG-------ECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHV 241 (284)
Q Consensus 169 ~~ad~~~~ps~~~~-------e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~ 241 (284)
+.||++++||. . |++|++++|||++|+|||+++.++..+++.++ +|++++++| +++++++|.++++++
T Consensus 271 ~~ad~~v~ps~--~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d--~~~l~~~i~~l~~~~ 345 (394)
T 3okp_A 271 AAADIFAMPAR--TRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVVEGSD--VDKLSELLIELLDDP 345 (394)
T ss_dssp HHCSEEEECCC--CBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEECCTTC--HHHHHHHHHHHHTCH
T ss_pred HhCCEEEecCc--cccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcC-CceEeCCCC--HHHHHHHHHHHHhCH
Confidence 99999999999 7 99999999999999999999999999999998 999999988 999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhh
Q 023290 242 ERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKS 279 (284)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (284)
+.++++++++++.+.++|+|+.+++++.++|+++..+.
T Consensus 346 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~~ 383 (394)
T 3okp_A 346 IRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRKL 383 (394)
T ss_dssp HHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC--
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccCc
Confidence 99999999999999989999999999999999877553
|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-37 Score=267.79 Aligned_cols=249 Identities=17% Similarity=0.149 Sum_probs=215.9
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEec
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g 91 (284)
..++.+|.++++|....+. ....++.+..++.+||||+|.+.+.+...+..+...+..+++++|++++ ++|+++|
T Consensus 184 ~~~~~ad~ii~~S~~~~~~----~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G 258 (439)
T 3fro_A 184 TGGYIADIVTTVSRGYLID----EWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEG-VTFMFIG 258 (439)
T ss_dssp HHHHHCSEEEESCHHHHHH----THHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTCCSC-EEEEEEC
T ss_pred hhhhhccEEEecCHHHHHH----HhhhhhhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCCCCC-cEEEEEc
Confidence 4456799999999988776 3334567889999999999999887653222233346889999999877 9999999
Q ss_pred ccc-ccccHHHHHHHHHHHHHHHHhhccCC--CCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHH
Q 023290 92 SVS-RGKGQDLFLHSFYESLELIKEKKLEV--PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAP 166 (284)
Q Consensus 92 ~~~-~~k~~~~~~~a~~~l~~~~~~~~~~~--~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~ 166 (284)
++. +.||++.+++|+..+.. +. ++++|+++|.++. .+.+.+++++++++ +.+.+.|++ +++..
T Consensus 259 ~~~~~~Kg~~~li~a~~~l~~-------~~~~~~~~l~i~G~g~~---~~~~~l~~~~~~~~--~~~~~~g~~~~~~~~~ 326 (439)
T 3fro_A 259 RFDRGQKGVDVLLKAIEILSS-------KKEFQEMRFIIIGKGDP---ELEGWARSLEEKHG--NVKVITEMLSREFVRE 326 (439)
T ss_dssp CSSCTTBCHHHHHHHHHHHHT-------SGGGGGEEEEEECCCCH---HHHHHHHHHHHHCT--TEEEECSCCCHHHHHH
T ss_pred ccccccccHHHHHHHHHHHHh-------cccCCCeEEEEEcCCCh---hHHHHHHHHHhhcC--CEEEEcCCCCHHHHHH
Confidence 999 99999999999998865 33 6899999998762 24588999999988 678889954 78999
Q ss_pred HHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhh-CHHHHH
Q 023290 167 YLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVERRL 245 (284)
Q Consensus 167 ~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~-~~~~~~ 245 (284)
+|+.||++++||. .|++|++++|||+||+|||+++.++..+++.++ +|++++++| +++++++|.++++ +++.++
T Consensus 327 ~~~~adv~v~ps~--~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d--~~~la~~i~~ll~~~~~~~~ 401 (439)
T 3fro_A 327 LYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGD--PGELANAILKALELSRSDLS 401 (439)
T ss_dssp HHTTCSEEEECBS--CCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEECTTC--HHHHHHHHHHHHHHTTTTTH
T ss_pred HHHHCCEEEeCCC--CCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEeCCCC--HHHHHHHHHHHHhcCHHHHH
Confidence 9999999999999 899999999999999999999999999999877 999999998 9999999999999 999999
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhcCCC
Q 023290 246 TMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSKSHL 283 (284)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 283 (284)
++++++++.+ ++|+|+.+++++.++|+++++++.+.|
T Consensus 402 ~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T 3fro_A 402 KFRENCKKRA-MSFSWEKSAERYVKAYTGSIDRAFDFI 438 (439)
T ss_dssp HHHHHHHHHH-HTSCHHHHHHHHHHHHHTCSCCBCSSB
T ss_pred HHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHHhhhhhc
Confidence 9999999999 679999999999999999998876654
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-37 Score=263.91 Aligned_cols=240 Identities=17% Similarity=0.187 Sum_probs=208.3
Q ss_pred cccccCCcc--cccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCC--CCe
Q 023290 10 YVKHLPLVA--GAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRN--EDL 85 (284)
Q Consensus 10 ~~~~~~~~~--~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~ 85 (284)
....++.++ .+++.|....+.+.+ +|. ..++.++|||+|.+.+. ..++++++++ +.+
T Consensus 125 ~~~~~~~~~~~~ii~~S~~~~~~~~~-----~~~-~~~~~vi~ngvd~~~~~-------------~~~~~~~~~~~~~~~ 185 (413)
T 3oy2_A 125 LWWIFSHPKVVGVMAMSKCWISDICN-----YGC-KVPINIVSHFVDTKTIY-------------DARKLVGLSEYNDDV 185 (413)
T ss_dssp GGGGGGCTTEEEEEESSTHHHHHHHH-----TTC-CSCEEECCCCCCCCCCT-------------THHHHTTCGGGTTSE
T ss_pred HHHHHhccCCceEEEcCHHHHHHHHH-----cCC-CCceEEeCCCCCHHHHH-------------HHHHhcCCCcccCce
Confidence 356677777 999999999887554 455 67899999999998761 2356778777 789
Q ss_pred EEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCC-hHHHHHHHHHHHHcCCCCc-------EEE
Q 023290 86 LFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQ-TKFESELRNYVMQKKIQDR-------VHF 157 (284)
Q Consensus 86 ~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~-~~~~~~l~~~~~~~~~~~~-------v~~ 157 (284)
+|+++|++.+.||++.+++|+..+.+ +.++++|+|+|.++... ....+.++++++++++.++ +.+
T Consensus 186 ~il~vGr~~~~Kg~~~li~a~~~l~~-------~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~ 258 (413)
T 3oy2_A 186 LFLNMNRNTARKRLDIYVLAAARFIS-------KYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMIN 258 (413)
T ss_dssp EEECCSCSSGGGTHHHHHHHHHHHHH-------HCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEE
T ss_pred EEEEcCCCchhcCcHHHHHHHHHHHH-------hCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeec
Confidence 99999999999999999999999866 33899999999986432 1235888999999999887 778
Q ss_pred eccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCc---------------ee--
Q 023290 158 VNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTT---------------GL-- 218 (284)
Q Consensus 158 ~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~---------------g~-- 218 (284)
.|++ +++..+|+.||++++||. .|+||++++|||+||+|||+++.++..|++.++.+ |+
T Consensus 259 ~g~~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~g 336 (413)
T 3oy2_A 259 RTVLTDERVDMMYNACDVIVNCSS--GEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGG 336 (413)
T ss_dssp CSCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCC
T ss_pred cCcCCHHHHHHHHHhCCEEEeCCC--cCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcce
Confidence 8986 589999999999999999 89999999999999999999999999999998887 99
Q ss_pred eecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhc
Q 023290 219 LHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSK 280 (284)
Q Consensus 219 ~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (284)
+++++| +++++++| ++++|++.++++++++++.+.++|+|+.+++++.++|++++++..
T Consensus 337 l~~~~d--~~~la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~~ 395 (413)
T 3oy2_A 337 IEGIID--VDDLVEAF-TFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVES 395 (413)
T ss_dssp EEEECC--HHHHHHHH-HHTTSHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC---
T ss_pred eeCCCC--HHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcC
Confidence 999988 99999999 999999999999999999998899999999999999999987643
|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-37 Score=270.57 Aligned_cols=251 Identities=17% Similarity=0.201 Sum_probs=213.9
Q ss_pred cccCCcccccccchhhHHHHHHHHHHH--hc-c----cCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhC-----
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRER--LR-I----KMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLG----- 79 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~--~~-~----~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~----- 79 (284)
..++.+|.++++|....+. +.+. +| + +..++.|||||+|.+.+.+.... ..+..+|+++|
T Consensus 186 ~~~~~ad~vi~~S~~~~~~----~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~~~~~~~~----~~~~~~r~~~~~~~~~ 257 (499)
T 2r60_A 186 LTMSYADKIIVSTSQERFG----QYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGD----KIKAKITKYLERDLGS 257 (499)
T ss_dssp HHHHHCSEEEESSHHHHHH----TTTSGGGTTTCCTTCGGGEEECCCCBCTTTSSSCCCH----HHHHHHHHHHHHHSCG
T ss_pred HHHhcCCEEEECCHHHHHH----HHhhhcccccccccCCCCeEEECCCcChhhcCccchh----hhHHHHHHHhcccccc
Confidence 4557899999999988776 3334 45 5 66789999999998877654321 11366788888
Q ss_pred CCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCC----------ChHHHHHHHHHHHHc
Q 023290 80 VRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNA----------QTKFESELRNYVMQK 149 (284)
Q Consensus 80 ~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~----------~~~~~~~l~~~~~~~ 149 (284)
++++.++|+++|++.+.||++.+++|+..+.+..+ ..++++|+|+.... ...+.+.++++++++
T Consensus 258 ~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~------~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~ 331 (499)
T 2r60_A 258 ERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQD------KANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNN 331 (499)
T ss_dssp GGTTSCEEEECSCCCGGGCHHHHHHHHHTCHHHHH------HCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHT
T ss_pred cCCCCcEEEEeecCccccCHHHHHHHHHHHHHhCC------CceEEEEECCCCCcccccccccccchHHHHHHHHHHHhc
Confidence 77788899999999999999999999998865432 34689999982211 112378899999999
Q ss_pred CCCCcEEEeccc--cCHHHHHhhc----cEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCC
Q 023290 150 KIQDRVHFVNKT--LTVAPYLAAI----DVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVG 223 (284)
Q Consensus 150 ~~~~~v~~~~~~--~~~~~~~~~a----d~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~ 223 (284)
++.++|.|+|++ +++..+|+.| |++++||. .||||++++|||+||+|||+++.++..|++.++.+|++++++
T Consensus 332 ~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~--~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~~~~ 409 (499)
T 2r60_A 332 DCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSF--YEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPE 409 (499)
T ss_dssp TCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCS--CBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEECTT
T ss_pred CCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcc--cCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCCceEEEeCCC
Confidence 999999999997 7899999999 99999999 899999999999999999999999999999999999999998
Q ss_pred CCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhc
Q 023290 224 KEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSK 280 (284)
Q Consensus 224 d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (284)
| +++++++|.++++|++.++++++++++.+.++|+|+.+++++.++|++++++++
T Consensus 410 d--~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~~ 464 (499)
T 2r60_A 410 D--PEDIARGLLKAFESEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKD 464 (499)
T ss_dssp C--HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC--
T ss_pred C--HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhh
Confidence 8 999999999999999999999999999999889999999999999999987653
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=258.09 Aligned_cols=237 Identities=17% Similarity=0.198 Sum_probs=208.1
Q ss_pred CcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccccc
Q 023290 16 LVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSR 95 (284)
Q Consensus 16 ~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~~ 95 (284)
.+|.++++|....+.+.+ .+|.+..++.++|||+|.+.+.+..... .+..+++++|++++.++++++|++.+
T Consensus 136 ~~d~ii~~s~~~~~~~~~----~~~~~~~~~~vi~ngv~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~G~~~~ 207 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQK----HYQTEPERFQILPPGIYPDRKYSEQIPN----SREIYRQKNGIKEQQNLLLQVGSDFG 207 (374)
T ss_dssp CCCEEEESCHHHHHHHHH----HHCCCGGGEEECCCCCCGGGSGGGSCTT----HHHHHHHHTTCCTTCEEEEEECSCTT
T ss_pred CCcEEEEcCHHHHHHHHH----HhCCChhheEEecCCcCHHhcCcccchh----HHHHHHHHhCCCCCCeEEEEeccchh
Confidence 689999999988887544 4788888999999999998776543221 14678899999988999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhccEEE
Q 023290 96 GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLV 175 (284)
Q Consensus 96 ~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad~~~ 175 (284)
.||++.+++++..+.+... ++++|+++|.+. .+.++++++++++.++|.++|+.+++..+|+.||+++
T Consensus 208 ~K~~~~li~a~~~l~~~~~------~~~~l~i~G~g~------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v 275 (374)
T 2iw1_A 208 RKGVDRSIEALASLPESLR------HNTLLFVVGQDK------PRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLL 275 (374)
T ss_dssp TTTHHHHHHHHHTSCHHHH------HTEEEEEESSSC------CHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEE
T ss_pred hcCHHHHHHHHHHhHhccC------CceEEEEEcCCC------HHHHHHHHHHcCCCCcEEECCCcccHHHHHHhcCEEE
Confidence 9999999999988755321 689999999974 2578888999999899999999999999999999999
Q ss_pred EcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeec-CCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 023290 176 QNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHP-VGKEGITPLAKNIVKLATHVERRLTMGKRGYER 254 (284)
Q Consensus 176 ~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~-~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 254 (284)
+||. .|++|++++|||++|+|||+++.++..+++.++.+|++++ ++| +++++++|.++++|++.++++++++++.
T Consensus 276 ~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 351 (374)
T 2iw1_A 276 HPAY--QEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFS--QEQLNEVLRKALTQSPLRMAWAENARHY 351 (374)
T ss_dssp ECCS--CCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCC--HHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred eccc--cCCcccHHHHHHHCCCCEEEecCCCchhhhccCCceEEeCCCCC--HHHHHHHHHHHHcChHHHHHHHHHHHHH
Confidence 9998 8999999999999999999999999999999999999998 777 9999999999999999999999999998
Q ss_pred HHHhcCHHHHHHHHHHHHHHHHH
Q 023290 255 VKEIFQEHHMAERIAVVLKEVLK 277 (284)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~ 277 (284)
+.+ ++|+.+.+++.++++..+.
T Consensus 352 ~~~-~~~~~~~~~~~~~l~~~l~ 373 (374)
T 2iw1_A 352 ADT-QDLYSLPEKAADIITGGLD 373 (374)
T ss_dssp HHH-SCCSCHHHHHHHHHHCC--
T ss_pred HHH-hhHHHHHHHHHHHHHHhhc
Confidence 874 7999999999999987654
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-36 Score=258.61 Aligned_cols=237 Identities=19% Similarity=0.193 Sum_probs=200.8
Q ss_pred cCCccccc-ccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecc
Q 023290 14 LPLVAGAM-IDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINS 92 (284)
Q Consensus 14 ~~~~~~~i-~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~ 92 (284)
+..++.++ ++|....+. ++..++.+||||+|...+...+... ..+..++++++++++.++++++|+
T Consensus 173 ~~~~~~~i~~~s~~~~~~----------~~~~~~~vi~ngvd~~~~~~~~~~~---~~~~~~r~~~~~~~~~~~i~~vGr 239 (416)
T 2x6q_A 173 VEKYDRYIFHLPEYVQPE----------LDRNKAVIMPPSIDPLSEKNVELKQ---TEILRILERFDVDPEKPIITQVSR 239 (416)
T ss_dssp HTTSSEEEESSGGGSCTT----------SCTTTEEECCCCBCTTSTTTSCCCH---HHHHHHHHHTTCCTTSCEEEEECC
T ss_pred HHhCCEEEEechHHHHhh----------CCccceEEeCCCCChhhhcccccCh---hhHHHHHHHhCCCCCCcEEEEEec
Confidence 44566655 555544332 4447899999999986554321111 114678899999988999999999
Q ss_pred ccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEecccc-----CHHHH
Q 023290 93 VSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL-----TVAPY 167 (284)
Q Consensus 93 ~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~-----~~~~~ 167 (284)
+.+.||++.+++|+..+.+ +.++++|+|+|.++...++..+.++++++++++.++|.|+|+.. ++..+
T Consensus 240 l~~~Kg~~~li~a~~~l~~-------~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~ 312 (416)
T 2x6q_A 240 FDPWKGIFDVIEIYRKVKE-------KIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAF 312 (416)
T ss_dssp CCTTSCHHHHHHHHHHHHH-------HCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHH
T ss_pred cccccCHHHHHHHHHHHHH-------hCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHHH
Confidence 9999999999999998866 33799999999987544446778899999999989999999653 79999
Q ss_pred HhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHH
Q 023290 168 LAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTM 247 (284)
Q Consensus 168 ~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~ 247 (284)
|+.||++++||. .||||++++|||+||+|||+++.++..+++.++.+|++++ | +++++++|..+++|++.++++
T Consensus 313 ~~~ad~~v~ps~--~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~~--d--~~~la~~i~~ll~~~~~~~~~ 386 (416)
T 2x6q_A 313 QRASDVILQMSI--REGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLVR--D--ANEAVEVVLYLLKHPEVSKEM 386 (416)
T ss_dssp HHHCSEEEECCS--SCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEES--S--HHHHHHHHHHHHHCHHHHHHH
T ss_pred HHhCCEEEECCC--cCCCccHHHHHHHcCCCEEEccCCCChhheecCCCeEEEC--C--HHHHHHHHHHHHhCHHHHHHH
Confidence 999999999999 8999999999999999999999999999999999999998 5 999999999999999999999
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 023290 248 GKRGYERVKEIFQEHHMAERIAVVLKEVL 276 (284)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (284)
++++++.+.++|+|+.+++++.++|++++
T Consensus 387 ~~~a~~~~~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 387 GAKAKERVRKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp HHHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 99999999889999999999999998765
|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-36 Score=262.36 Aligned_cols=248 Identities=17% Similarity=0.165 Sum_probs=203.8
Q ss_pred ccCCcccccccchhhHHHHHHH-H----HHHhcccCCCeEEEecCCccccchhhhhh-----------hHHHHHHHHHHH
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNR-T----RERLRIKMPDTYVVHLGNSKELMEVAEDN-----------VAKRVLREHVRE 76 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~-~----~~~~~~~~~~i~vi~~g~~~~~~~~~~~~-----------~~~~~~~~~~r~ 76 (284)
.++.+|.++++|....+.+.+. + ...++.+..++.+||||+|.+.+.+.... ..+...+..+++
T Consensus 203 ~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 282 (485)
T 1rzu_A 203 GLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAE 282 (485)
T ss_dssp HHHHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHH
T ss_pred HHhhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHH
Confidence 3467999999999988875432 0 00112456789999999998877654321 011222477899
Q ss_pred HhCCCCC-CeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcE
Q 023290 77 SLGVRNE-DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRV 155 (284)
Q Consensus 77 ~~~~~~~-~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v 155 (284)
++|++++ .++|+++|++.+.||++.+++|+..+.+ ++++|+|+|.++. .+.+.+++++++++ ++|
T Consensus 283 ~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~---------~~~~l~ivG~g~~---~~~~~l~~~~~~~~--~~v 348 (485)
T 1rzu_A 283 HFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS---------LGGRLVVLGAGDV---ALEGALLAAASRHH--GRV 348 (485)
T ss_dssp HHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH---------TTCEEEEEECBCH---HHHHHHHHHHHHTT--TTE
T ss_pred hcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh---------cCceEEEEeCCch---HHHHHHHHHHHhCC--CcE
Confidence 9999875 6789999999999999999999998865 6899999998742 25788888888875 678
Q ss_pred E-Eeccc-cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecC---------CceeeecCCC
Q 023290 156 H-FVNKT-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG---------TTGLLHPVGK 224 (284)
Q Consensus 156 ~-~~~~~-~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~---------~~g~~~~~~d 224 (284)
. +.|.. +++..+|+.||++++||. +|+||++++|||+||+|||+++.++..|++.++ .+|++++++|
T Consensus 349 ~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d 426 (485)
T 1rzu_A 349 GVAIGYNEPLSHLMQAGCDAIIIPSR--FEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVT 426 (485)
T ss_dssp EEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCS
T ss_pred EEecCCCHHHHHHHHhcCCEEEECcc--cCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCCCC
Confidence 7 78887 445899999999999999 899999999999999999999999999999998 8999999988
Q ss_pred CChHHHHHHHHHHh---hCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhcC
Q 023290 225 EGITPLAKNIVKLA---THVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSKS 281 (284)
Q Consensus 225 ~~~~~~~~~i~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (284)
+++++++|.+++ +|++.++++++++++ +.|+|+.+++++.++|++++.+.+.
T Consensus 427 --~~~la~~i~~ll~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~~y~~~~~~~~~ 481 (485)
T 1rzu_A 427 --LDGLKQAIRRTVRYYHDPKLWTQMQKLGMK---SDVSWEKSAGLYAALYSQLISKGHH 481 (485)
T ss_dssp --HHHHHHHHHHHHHHHTCHHHHHHHHHHHHT---CCCBHHHHHHHHHHHHHHHTC----
T ss_pred --HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH---HhCChHHHHHHHHHHHHHhhCCCCC
Confidence 999999999999 799999999998874 6899999999999999999876543
|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=259.00 Aligned_cols=244 Identities=14% Similarity=0.125 Sum_probs=202.0
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhcc--------cC--CCeEEEecCCccccchhhhhh-----------hHHHHHH
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLRI--------KM--PDTYVVHLGNSKELMEVAEDN-----------VAKRVLR 71 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~~--------~~--~~i~vi~~g~~~~~~~~~~~~-----------~~~~~~~ 71 (284)
.++.+|.++++|....+.+.+. .+|. +. .++.+||||+|.+.+.+.... ..+...+
T Consensus 201 ~~~~ad~vi~~S~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (485)
T 2qzs_A 201 GLYYADHITAVSPTYAREITEP---QFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENK 277 (485)
T ss_dssp HHHHCSEEEESSHHHHHHTTSH---HHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHH
T ss_pred HHHhcCeEEecCHHHHHHHhcc---ccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhH
Confidence 3467999999999888775431 0232 22 789999999998877654321 1112235
Q ss_pred HHHHHHhCCCC--CCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHc
Q 023290 72 EHVRESLGVRN--EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK 149 (284)
Q Consensus 72 ~~~r~~~~~~~--~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~ 149 (284)
..+++++|+++ +.++|+++|++.+.||++.+++|+..+.+ ++++|+|+|.++. .+.+.++++++++
T Consensus 278 ~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~---------~~~~l~ivG~g~~---~~~~~l~~~~~~~ 345 (485)
T 2qzs_A 278 RQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE---------QGGQLALLGAGDP---VLQEGFLAAAAEY 345 (485)
T ss_dssp HHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH---------TTCEEEEEEEECH---HHHHHHHHHHHHS
T ss_pred HHHHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh---------CCcEEEEEeCCch---HHHHHHHHHHHhC
Confidence 77899999986 67899999999999999999999998865 6899999998742 2678888888887
Q ss_pred CCCCcEE-Eeccc-cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecC---------Ccee
Q 023290 150 KIQDRVH-FVNKT-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG---------TTGL 218 (284)
Q Consensus 150 ~~~~~v~-~~~~~-~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~---------~~g~ 218 (284)
+ ++|. +.|.. +++..+|+.||++++||. +|+||++++|||+||+|||+++.+++.|++.++ .+|+
T Consensus 346 ~--~~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~ 421 (485)
T 2qzs_A 346 P--GQVGVQIGYHEAFSHRIMGGADVILVPSR--FEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGF 421 (485)
T ss_dssp T--TTEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBE
T ss_pred C--CcEEEeCCCCHHHHHHHHHhCCEEEECCc--cCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceE
Confidence 5 6786 88886 445899999999999999 899999999999999999999999999999998 8999
Q ss_pred eecCCCCChHHHHHHHHHHh---hCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhc
Q 023290 219 LHPVGKEGITPLAKNIVKLA---THVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSK 280 (284)
Q Consensus 219 ~~~~~d~~~~~~~~~i~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (284)
+++++| +++++++|.+++ +|++.++++++++++ +.|+|+.+++++.++|++++.++.
T Consensus 422 l~~~~d--~~~la~~i~~ll~~~~~~~~~~~~~~~~~~---~~fs~~~~~~~~~~ly~~~~~~~~ 481 (485)
T 2qzs_A 422 VFEDSN--AWSLLRAIRRAFVLWSRPSLWRFVQRQAMA---MDFSWQVAAKSYRELYYRLKLEHH 481 (485)
T ss_dssp EECSSS--HHHHHHHHHHHHHHHTSHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHHHHC----
T ss_pred EECCCC--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHh---hcCCHHHHHHHHHHHHHHhhhhhc
Confidence 999998 999999999999 799999999998874 689999999999999999877654
|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-35 Score=257.67 Aligned_cols=239 Identities=20% Similarity=0.222 Sum_probs=191.4
Q ss_pred ccCCcccccccchhhHHHHHHHHHHHhc--------ccCCCeEEEecCCccccchhhhh------------hhHHHHHHH
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNRTRERLR--------IKMPDTYVVHLGNSKELMEVAED------------NVAKRVLRE 72 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~~~~~~~--------~~~~~i~vi~~g~~~~~~~~~~~------------~~~~~~~~~ 72 (284)
.+..+|.++++|...++.+. +.++ ....++.+|+||+|.+.+.+..+ ...+...+.
T Consensus 238 ~i~~ad~v~tVS~~~a~ei~----~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~ 313 (536)
T 3vue_A 238 GILEADRVLTVSPYYAEELI----SGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKE 313 (536)
T ss_dssp HHHHCSEEEESCHHHHHHHH----TTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHH
T ss_pred HHHhccEEEEcCHHHhhhhh----cccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHH
Confidence 34568999999998877643 3232 23568999999999998876432 123445567
Q ss_pred HHHHHhCCC--CCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcC
Q 023290 73 HVRESLGVR--NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKK 150 (284)
Q Consensus 73 ~~r~~~~~~--~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~ 150 (284)
.+++.+|++ ++.++|+++||+.++||++.+++|+.++.+ .+.+++++|.|.. .....++.....+
T Consensus 314 ~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~---------~~~~l~l~G~G~~---~~~~~~~~~~~~~- 380 (536)
T 3vue_A 314 ALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQ---------EDVQIVLLGTGKK---KFEKLLKSMEEKY- 380 (536)
T ss_dssp HHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTT---------SSCEEEEECCBCH---HHHHHHHHHHHHS-
T ss_pred HHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHh---------hCCeEEEEeccCc---hHHHHHHHHHhhc-
Confidence 888888885 456899999999999999999999998854 6789999998753 2445555555554
Q ss_pred CCCcEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCcee----------
Q 023290 151 IQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGL---------- 218 (284)
Q Consensus 151 ~~~~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~---------- 218 (284)
.+++.+.+.. +++..+|+.||++++||. +|+||++++|||+||+|||+++.||..|+|.++.+|+
T Consensus 381 -~~~v~~~~~~~~~~~~~~~~~aD~~v~PS~--~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~ 457 (536)
T 3vue_A 381 -PGKVRAVVKFNAPLAHLIMAGADVLAVPSR--FEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCK 457 (536)
T ss_dssp -TTTEEEECSCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTT
T ss_pred -CCceEEEEeccHHHHHHHHHhhheeecccc--cCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCcee
Confidence 4578887765 567889999999999999 9999999999999999999999999999999999998
Q ss_pred eecCCCCChHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 023290 219 LHPVGKEGITPLAKNIVKLAT--HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVL 276 (284)
Q Consensus 219 ~~~~~d~~~~~~~~~i~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (284)
++++.| +++++++|.++++ +.+.++++.+++ +.++|||+.++++|+++|+++.
T Consensus 458 l~~~~d--~~~la~ai~ral~~~~~~~~~~~~~~a---m~~~fSW~~~A~~y~~ly~~L~ 512 (536)
T 3vue_A 458 VVEPSD--VKKVAATLKRAIKVVGTPAYEEMVRNC---MNQDLSWKGPAKNWENVLLGLG 512 (536)
T ss_dssp CCCHHH--HHHHHHHHHHHHHHTTSHHHHHHHHHH---HHSCCSSHHHHHHHHHHHHTTC
T ss_pred EECCCC--HHHHHHHHHHHHHhcCcHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhh
Confidence 566666 8999999988776 445567777665 3478999999999999999863
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-34 Score=264.67 Aligned_cols=252 Identities=15% Similarity=0.214 Sum_probs=202.4
Q ss_pred ccCCcccccccchhhHHHHHHH---HHHHh--------------cccCCCeEEEecCCccccchhhhhhhHH-HHH----
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNR---TRERL--------------RIKMPDTYVVHLGNSKELMEVAEDNVAK-RVL---- 70 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~---~~~~~--------------~~~~~~i~vi~~g~~~~~~~~~~~~~~~-~~~---- 70 (284)
.+..+|.++++|....+.+.+. +.... +...+++.|||||+|.+.|.+....... ...
T Consensus 471 ~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i 550 (816)
T 3s28_A 471 AMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEI 550 (816)
T ss_dssp HHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHH
T ss_pred HHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccc
Confidence 5678999999998877631110 00000 1223489999999999887654322110 000
Q ss_pred ------HHHHHHHhCC--CCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCC------CCh
Q 023290 71 ------REHVRESLGV--RNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMN------AQT 136 (284)
Q Consensus 71 ------~~~~r~~~~~--~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~------~~~ 136 (284)
....++.+|+ ++++++|+++|++.+.||++.+++|+..+.+.. ++++|+|+|+++. ...
T Consensus 551 ~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~-------~~v~LvIvG~g~~~~~~~~e~~ 623 (816)
T 3s28_A 551 EELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLR-------ELANLVVVGGDRRKESKDNEEK 623 (816)
T ss_dssp HHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHH-------HHCEEEEECCCTTSCCCCHHHH
T ss_pred cccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhC-------CCeEEEEEeCCCcccccchhhH
Confidence 0112345565 667889999999999999999999999986532 7899999999862 112
Q ss_pred HHHHHHHHHHHHcCCCCcEEEeccc------cCHHHHHh-hccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcce
Q 023290 137 KFESELRNYVMQKKIQDRVHFVNKT------LTVAPYLA-AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTE 209 (284)
Q Consensus 137 ~~~~~l~~~~~~~~~~~~v~~~~~~------~~~~~~~~-~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e 209 (284)
.+.+.++++++++++.++|.|+|++ +++..+|+ .||++++||. .|+||++++|||+||+|||+|+.++..+
T Consensus 624 ~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~--~EgfglvllEAMA~G~PVIasd~GG~~E 701 (816)
T 3s28_A 624 AEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAE 701 (816)
T ss_dssp HHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCS--CBSSCHHHHHHHHTTCCEEEESSBTHHH
T ss_pred HHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCC--ccCccHHHHHHHHcCCCEEEeCCCChHH
Confidence 2678899999999999999999954 45778887 6899999999 8999999999999999999999999999
Q ss_pred eeecCCceeeecCCCCChHHHHHHHHHHh----hCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 023290 210 IVVNGTTGLLHPVGKEGITPLAKNIVKLA----THVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEV 275 (284)
Q Consensus 210 ~v~~~~~g~~~~~~d~~~~~~~~~i~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (284)
++.++.+|++++++| +++++++|.+++ .|++.++++++++++.+.++|+|+.+++++.++|+.+
T Consensus 702 iV~dg~~Gllv~p~D--~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 702 IIVHGKSGFHIDPYH--GDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp HCCBTTTBEEECTTS--HHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred HHccCCcEEEeCCCC--HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 999999999999998 999999997776 8999999999999999988999999999999999865
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=242.63 Aligned_cols=230 Identities=19% Similarity=0.226 Sum_probs=197.6
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEec
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g 91 (284)
..++.+|.+++.|....+.+.+. .+.+++ ++|||+|.+.+...... .+++++.++++++|
T Consensus 156 ~~~~~~d~ii~~s~~~~~~~~~~------~~~~~~-vi~~~v~~~~~~~~~~~-------------~~~~~~~~~i~~~G 215 (406)
T 2gek_A 156 PYHEKIIGRIAVSDLARRWQMEA------LGSDAV-EIPNGVDVASFADAPLL-------------DGYPREGRTVLFLG 215 (406)
T ss_dssp HHHTTCSEEEESSHHHHHHHHHH------HSSCEE-ECCCCBCHHHHHTCCCC-------------TTCSCSSCEEEEES
T ss_pred HHHhhCCEEEECCHHHHHHHHHh------cCCCcE-EecCCCChhhcCCCchh-------------hhccCCCeEEEEEe
Confidence 45688999999999988886553 345678 99999998766543211 12333567899999
Q ss_pred cc-cccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHH
Q 023290 92 SV-SRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYL 168 (284)
Q Consensus 92 ~~-~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~ 168 (284)
++ .+.||++.+++++..+.+ +.++++|+++|.+. . +.+++.++++ .++|.++|++ +++..+|
T Consensus 216 ~~~~~~Kg~~~li~a~~~l~~-------~~~~~~l~i~G~~~-----~-~~l~~~~~~~--~~~v~~~g~~~~~~~~~~~ 280 (406)
T 2gek_A 216 RYDEPRKGMAVLLAALPKLVA-------RFPDVEILIVGRGD-----E-DELREQAGDL--AGHLRFLGQVDDATKASAM 280 (406)
T ss_dssp CTTSGGGCHHHHHHHHHHHHT-------TSTTCEEEEESCSC-----H-HHHHHHTGGG--GGGEEECCSCCHHHHHHHH
T ss_pred eeCccccCHHHHHHHHHHHHH-------HCCCeEEEEEcCCc-----H-HHHHHHHHhc--cCcEEEEecCCHHHHHHHH
Confidence 99 999999999999998865 44799999999986 4 6777777766 5799999997 5679999
Q ss_pred hhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHH
Q 023290 169 AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMG 248 (284)
Q Consensus 169 ~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~ 248 (284)
+.||++++||. +.|++|++++|||++|+|||+++.++..+++.++.+|++++++| +++++++|.+++++++.+.+++
T Consensus 281 ~~adv~v~ps~-~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d--~~~l~~~i~~l~~~~~~~~~~~ 357 (406)
T 2gek_A 281 RSADVYCAPHL-GGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDD--ADGMAAALIGILEDDQLRAGYV 357 (406)
T ss_dssp HHSSEEEECCC-SCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEECCTTC--HHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHCCEEEecCC-CCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEeCCCC--HHHHHHHHHHHHcCHHHHHHHH
Confidence 99999999984 28999999999999999999999999999999999999999988 9999999999999999999999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhc
Q 023290 249 KRGYERVKEIFQEHHMAERIAVVLKEVLKKSK 280 (284)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (284)
+++++.+. .|+|+.+++++.++|++++++..
T Consensus 358 ~~~~~~~~-~~s~~~~~~~~~~~~~~~~~~~~ 388 (406)
T 2gek_A 358 ARASERVH-RYDWSVVSAQIMRVYETVSGAGI 388 (406)
T ss_dssp HHHHHHGG-GGBHHHHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHH-hCCHHHHHHHHHHHHHHHHhhcc
Confidence 99999998 89999999999999999987653
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.8e-31 Score=207.53 Aligned_cols=190 Identities=21% Similarity=0.280 Sum_probs=161.9
Q ss_pred EecCCccccch--hhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecccc-ccccHHHHHHHHHHHH--HHHHhhccCCCCe
Q 023290 49 VHLGNSKELME--VAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS-RGKGQDLFLHSFYESL--ELIKEKKLEVPSV 123 (284)
Q Consensus 49 i~~g~~~~~~~--~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~-~~k~~~~~~~a~~~l~--~~~~~~~~~~~~~ 123 (284)
||||+|.+.+. +.... ....+..+|+++|++++ .+|+++|++. +.||++.+++++..+. + +.+++
T Consensus 2 ipngvd~~~f~~~~~~~~--~~~~~~~~r~~~~~~~~-~~i~~~G~~~~~~K~~~~li~a~~~l~~~~-------~~~~~ 71 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLTGS--RDERKKSLLSKFGMDEG-VTFMFIGRFDRGQKGVDVLLKAIEILSSKK-------EFQEM 71 (200)
T ss_dssp ---CCCTTTSSGGGSCSC--HHHHHHHHHHHTTCCSC-EEEEEESCBCSSSSCHHHHHHHHHHHTTSG-------GGGGE
T ss_pred CCCccChhhccccccccc--hhhHHHHHHHHcCCCCC-CEEEEeeccccccCCHHHHHHHHHHHHhhc-------cCCCe
Confidence 79999999887 54310 01113678999999754 5888999999 9999999999998875 3 23789
Q ss_pred EEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEE-ecccc--CHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEE
Q 023290 124 HAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHF-VNKTL--TVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 200 (284)
Q Consensus 124 ~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~-~~~~~--~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi 200 (284)
+|+++|.+.+ ...+.+++.+++++ +|.+ +|+++ ++..+|+.||++++||. .|++|++++|||++|+|||
T Consensus 72 ~l~i~G~~~~---~~~~~l~~~~~~~~---~v~~~~g~~~~~~~~~~~~~ad~~l~ps~--~e~~~~~~~Ea~a~G~PvI 143 (200)
T 2bfw_A 72 RFIIIGKGDP---ELEGWARSLEEKHG---NVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPI 143 (200)
T ss_dssp EEEEECCBCH---HHHHHHHHHHHHCT---TEEEECSCCCHHHHHHHHTTCSEEEECCS--CCSSCHHHHHHHHTTCEEE
T ss_pred EEEEECCCCh---HHHHHHHHHHHhcC---CEEEEeccCCHHHHHHHHHHCCEEEECCC--CCCccHHHHHHHHCCCCEE
Confidence 9999998642 25678888888876 8999 99984 89999999999999999 8999999999999999999
Q ss_pred EcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcC
Q 023290 201 GTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVERRLTMGKRGYERVKEIFQ 260 (284)
Q Consensus 201 ~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~ 260 (284)
+++.++..+++ ++.+|++++++| +++++++|.++++ |++.++++++++++.+.+ ||
T Consensus 144 ~~~~~~~~e~~-~~~~g~~~~~~~--~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~-fs 200 (200)
T 2bfw_A 144 ASAVGGLRDII-TNETGILVKAGD--PGELANAILKALELSRSDLSKFRENCKKRAMS-FS 200 (200)
T ss_dssp EESCHHHHHHC-CTTTCEEECTTC--HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-TC
T ss_pred EeCCCChHHHc-CCCceEEecCCC--HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh-cC
Confidence 99999999999 999999999988 9999999999999 999999999999999887 75
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=5.5e-32 Score=227.56 Aligned_cols=208 Identities=17% Similarity=0.143 Sum_probs=179.0
Q ss_pred cccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecccccc
Q 023290 17 VAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRG 96 (284)
Q Consensus 17 ~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~~~ 96 (284)
+|.++++|....+.+.+ ..++.+||||+|.+.+.+... . .++..+++++|++.+.
T Consensus 120 ~d~ii~~S~~~~~~~~~---------~~~~~vi~ngvd~~~~~~~~~---------------~-~~~~~~i~~vG~~~~~ 174 (342)
T 2iuy_A 120 PVGCTYSSRAQRAHCGG---------GDDAPVIPIPVDPARYRSAAD---------------Q-VAKEDFLLFMGRVSPH 174 (342)
T ss_dssp CTTEEESCHHHHHHTTC---------CTTSCBCCCCBCGGGSCCSTT---------------C-CCCCSCEEEESCCCGG
T ss_pred ceEEEEcCHHHHHHHhc---------CCceEEEcCCCChhhcCcccc---------------c-CCCCCEEEEEeccccc
Confidence 89999999988776432 578999999999887765432 1 1245578899999999
Q ss_pred ccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHhhccEE
Q 023290 97 KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVL 174 (284)
Q Consensus 97 k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~~ad~~ 174 (284)
||++.+++++..+ +++|+++|.++ ..+.+++++++++ ++|.|+|++ +++..+|+.||++
T Consensus 175 Kg~~~li~a~~~~------------~~~l~i~G~g~-----~~~~l~~~~~~~~--~~v~~~g~~~~~~l~~~~~~adv~ 235 (342)
T 2iuy_A 175 KGALEAAAFAHAC------------GRRLVLAGPAW-----EPEYFDEITRRYG--STVEPIGEVGGERRLDLLASAHAV 235 (342)
T ss_dssp GTHHHHHHHHHHH------------TCCEEEESCCC-----CHHHHHHHHHHHT--TTEEECCCCCHHHHHHHHHHCSEE
T ss_pred cCHHHHHHHHHhc------------CcEEEEEeCcc-----cHHHHHHHHHHhC--CCEEEeccCCHHHHHHHHHhCCEE
Confidence 9999999999763 57899999986 5677888888877 699999998 4679999999999
Q ss_pred EEcCCC--------CcCccchhHHHHHhcCCCEEEcCCCCcceeeec--CCceeeecCCCCChHHHHHHHHHHhhCHHHH
Q 023290 175 VQNSQA--------WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN--GTTGLLHPVGKEGITPLAKNIVKLATHVERR 244 (284)
Q Consensus 175 ~~ps~~--------~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~--~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~ 244 (284)
++||.. |.|+||++++|||++|+|||+++.++..|++.+ +.+|+++++ | +++++++|.++++
T Consensus 236 v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~~~-d--~~~l~~~i~~l~~----- 307 (342)
T 2iuy_A 236 LAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGTDF-A--PDEARRTLAGLPA----- 307 (342)
T ss_dssp EECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSSCC-C--HHHHHHHHHTSCC-----
T ss_pred EECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEcCC-C--HHHHHHHHHHHHH-----
Confidence 999971 369999999999999999999999999999999 899999999 8 9999999999987
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhh
Q 023290 245 LTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKS 279 (284)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (284)
++++++.+.++|+|+.+++++.++|+++++++
T Consensus 308 ---~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 339 (342)
T 2iuy_A 308 ---SDEVRRAAVRLWGHVTIAERYVEQYRRLLAGA 339 (342)
T ss_dssp ---HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTTC
T ss_pred ---HHHHHHHHHHhcCHHHHHHHHHHHHHHHHccC
Confidence 56778888889999999999999999998764
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-29 Score=189.97 Aligned_cols=161 Identities=13% Similarity=0.137 Sum_probs=138.0
Q ss_pred CeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--
Q 023290 84 DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT-- 161 (284)
Q Consensus 84 ~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~-- 161 (284)
+++|+++|++.+.||++.+++++..+. +.++++|+++|.++ ..+.+++.++++++ ++.+ |+.
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~--------~~~~~~l~i~G~g~-----~~~~~~~~~~~~~~--~v~~-g~~~~ 65 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSK--------YKQDIVLLLKGKGP-----DEKKIKLLAQKLGV--KAEF-GFVNS 65 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCT--------TGGGEEEEEECCST-----THHHHHHHHHHHTC--EEEC-CCCCH
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhc--------cCCCeEEEEEeCCc-----cHHHHHHHHHHcCC--eEEE-eecCH
Confidence 478999999999999999999998863 22799999999876 56888999999887 7888 885
Q ss_pred cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCC-CEEE-cCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhh
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQL-PVLG-TAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT 239 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~-Pvi~-~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~ 239 (284)
+++..+|+.||++++||. .|+||++++|||++|+ |||+ ++.++..+++.++ +.+++++| +++++++|.++++
T Consensus 66 ~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~--~~~~~~~~--~~~l~~~i~~l~~ 139 (166)
T 3qhp_A 66 NELLEILKTCTLYVHAAN--VESEAIACLEAISVGIVPVIANSPLSATRQFALDE--RSLFEPNN--AKDLSAKIDWWLE 139 (166)
T ss_dssp HHHHHHHTTCSEEEECCC--SCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSG--GGEECTTC--HHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEECCc--ccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCC--ceEEcCCC--HHHHHHHHHHHHh
Confidence 789999999999999999 8999999999999998 9999 5688899998765 44788887 9999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 023290 240 HVERRLTMGKRGYERVKEIFQEHHMAER 267 (284)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (284)
+++.++++++++++.+ ++|+|+.++++
T Consensus 140 ~~~~~~~~~~~~~~~~-~~~s~~~~~~~ 166 (166)
T 3qhp_A 140 NKLERERMQNEYAKSA-LNYTLENSVIQ 166 (166)
T ss_dssp CHHHHHHHHHHHHHHH-HHHC-------
T ss_pred CHHHHHHHHHHHHHHH-HHCChhhhhcC
Confidence 9999999999999988 67999998763
|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-28 Score=212.28 Aligned_cols=217 Identities=12% Similarity=0.070 Sum_probs=169.6
Q ss_pred CCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCe
Q 023290 44 PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSV 123 (284)
Q Consensus 44 ~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~ 123 (284)
.++.++|||+|.+.|........... ...+|++++ ++.+|+++||+.+.||++.+++|+.++.+..++. ..++
T Consensus 219 ~~v~vip~GID~~~f~~~~~~~~~~~-~~~lr~~~~---~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~---~~~v 291 (482)
T 1uqt_A 219 FRTEVYPIGIEPKEIAKQAAGPLPPK-LAQLKAELK---NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQH---HGKI 291 (482)
T ss_dssp EEEEECCCCCCHHHHHHHHHSCCCHH-HHHHHHHTT---TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGG---TTTE
T ss_pred EEEEEEeccCCHHHHHHHhcCcchHH-HHHHHHHhC---CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccc---cCcE
Confidence 57899999999987765322111111 356788886 5678899999999999999999999987754331 1358
Q ss_pred EEEEEecCCCCChH----HHHHHHHHHHHcC----CC--CcEEEe-ccc--cCHHHHHhhccEEEEcCCCCcCccchhHH
Q 023290 124 HAVIIGSDMNAQTK----FESELRNYVMQKK----IQ--DRVHFV-NKT--LTVAPYLAAIDVLVQNSQAWGECFGRITI 190 (284)
Q Consensus 124 ~l~i~G~~~~~~~~----~~~~l~~~~~~~~----~~--~~v~~~-~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~ 190 (284)
+|+++|.+...+.+ ..+.+++++.+.+ .. ..|.++ |.+ +++..+|+.||++++||. .||||++++
T Consensus 292 ~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~--~EGfgLv~l 369 (482)
T 1uqt_A 292 RYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL--RDGMNLVAK 369 (482)
T ss_dssp EEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCS--SBSCCHHHH
T ss_pred EEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCC--cccCCchHH
Confidence 89999974332222 3445555555432 21 136654 543 789999999999999999 999999999
Q ss_pred HHHhcCC-----CEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHH
Q 023290 191 EAMAFQL-----PVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVERRLTMGKRGYERVKEIFQEHHM 264 (284)
Q Consensus 191 Eama~G~-----Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (284)
||||||+ |+|+|+.+|..+.+ + +|+++++.| +++++++|.++++ ++++++++.+++++.+.+ |+|+.+
T Consensus 370 EAmA~g~~~~~gpvV~S~~~G~~~~l-~--~g~lv~p~d--~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-~s~~~~ 443 (482)
T 1uqt_A 370 EYVAAQDPANPGVLVLSQFAGAANEL-T--SALIVNPYD--RDEVAAALDRALTMSLAERISRHAEMLDVIVK-NDINHW 443 (482)
T ss_dssp HHHHHSCTTSCCEEEEETTBGGGGTC-T--TSEEECTTC--HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-TCHHHH
T ss_pred HHHHhCCCCCCCCEEEECCCCCHHHh-C--CeEEECCCC--HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-CCHHHH
Confidence 9999997 89999988877777 2 799999998 9999999999998 577889999999998865 999999
Q ss_pred HHHHHHHHHHH
Q 023290 265 AERIAVVLKEV 275 (284)
Q Consensus 265 ~~~~~~~~~~~ 275 (284)
++++++.|+++
T Consensus 444 a~~~l~~l~~~ 454 (482)
T 1uqt_A 444 QECFISDLKQI 454 (482)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHhc
Confidence 99999999876
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-28 Score=215.93 Aligned_cols=258 Identities=14% Similarity=0.129 Sum_probs=183.6
Q ss_pred cCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhh-hHHHHHHHHH----HHH----hCCC-CC
Q 023290 14 LPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDN-VAKRVLREHV----RES----LGVR-NE 83 (284)
Q Consensus 14 ~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~-~~~~~~~~~~----r~~----~~~~-~~ 83 (284)
+..+|.++++|..+++.++. .++.+.+.+ |+||+|.+.+.+.... ..+...+..+ +.. ++++ ++
T Consensus 258 a~~AD~ITTVS~~yA~Ei~~----Ll~r~~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~dk 331 (725)
T 3nb0_A 258 AHSADVFTTVSQITAFEAEH----LLKRKPDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLDN 331 (725)
T ss_dssp HHHSSEEEESSHHHHHHHHH----HTSSCCSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGGG
T ss_pred HHhCCEEEECCHHHHHHHHH----HhcCCCCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCCc
Confidence 44899999999999887554 355655544 9999999988774221 1122223333 222 2454 44
Q ss_pred CeEEEEecccc-ccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCCh--------------------------
Q 023290 84 DLLFAIINSVS-RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQT-------------------------- 136 (284)
Q Consensus 84 ~~~i~~~g~~~-~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~-------------------------- 136 (284)
.+++..+||+. ..||++.+++|+.++...++..+.+..-+.|+++..+.....
T Consensus 332 ~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~ 411 (725)
T 3nb0_A 332 TLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGK 411 (725)
T ss_dssp EEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhH
Confidence 56676789999 689999999999999988776543445567777765422210
Q ss_pred ----------------------------------------------------------HHHHHHHHHHHHcCCCCc----
Q 023290 137 ----------------------------------------------------------KFESELRNYVMQKKIQDR---- 154 (284)
Q Consensus 137 ----------------------------------------------------------~~~~~l~~~~~~~~~~~~---- 154 (284)
...+.+...++++++.+.
T Consensus 412 ~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~dr 491 (725)
T 3nb0_A 412 RIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDR 491 (725)
T ss_dssp HHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCS
T ss_pred HHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCc
Confidence 011223334455555443
Q ss_pred --EEEecc-c--------cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecC-------Cc
Q 023290 155 --VHFVNK-T--------LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNG-------TT 216 (284)
Q Consensus 155 --v~~~~~-~--------~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~-------~~ 216 (284)
|.|++. . .++..+|+.||++++||. +|+||++++||||||+|||+++.+|..+++.++ .+
T Consensus 492 VKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~--~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~t 569 (725)
T 3nb0_A 492 VKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSY--YEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDY 569 (725)
T ss_dssp EEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCS--SBSSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHHT
T ss_pred eeEEEeccccCCCCccchhHHHHHHhhceEEEeccc--cCCCCHHHHHHHHcCCCEEEeCCCChhhhhhccccccCCCCc
Confidence 555543 2 368999999999999998 999999999999999999999999999998775 36
Q ss_pred eeeecCCC-CChHHHHHHHHHHh----h-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhc
Q 023290 217 GLLHPVGK-EGITPLAKNIVKLA----T-HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKKSK 280 (284)
Q Consensus 217 g~~~~~~d-~~~~~~~~~i~~l~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (284)
|+++.+.+ .++++++++|.+++ . ++..+..++.++++.+ +.|+|+.+++++.++|+.++.+..
T Consensus 570 G~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A-~~FSWe~iA~~Yl~~Ye~aL~~~~ 638 (725)
T 3nb0_A 570 GIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALS-DLLDWKRMGLEYVKARQLALRRGY 638 (725)
T ss_dssp TEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGG-GGGBHHHHHHHHHHHHHHHHHHHC
T ss_pred eEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHhhcc
Confidence 98885421 22666665555554 3 6788889998887766 579999999999999999987654
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-30 Score=223.55 Aligned_cols=209 Identities=11% Similarity=0.085 Sum_probs=160.0
Q ss_pred cccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccc-cccc
Q 023290 19 GAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSV-SRGK 97 (284)
Q Consensus 19 ~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~-~~~k 97 (284)
.++++|....+.+++ .|.+.+++.+++||+|.+.+.... .+ .++...++++|++ .+.|
T Consensus 197 ~vi~~S~~~~~~l~~-----~g~~~~~~~~i~~g~d~~~~~~~~---------------~~-~~~~~~il~~gr~~~~~K 255 (413)
T 2x0d_A 197 IAVFNSELLKQYFNN-----KGYNFTDEYFFQPKINTTLKNYIN---------------DK-RQKEKIILVYGRPSVKRN 255 (413)
T ss_dssp EEEEESHHHHHHHHH-----HTCCCSEEEEECCCCCHHHHTTTT---------------SC-CCCCSEEEEEECTTCGGG
T ss_pred EEEEcCHHHHHHHHH-----cCCCCCceEEeCCCcCchhhcccc---------------cc-cCCCCEEEEEecCchhcc
Confidence 478889888887554 356656789999999876443210 11 2344567788996 6889
Q ss_pred cHHHHHHHHHHHHHHHHhhccCCC---CeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHhhcc
Q 023290 98 GQDLFLHSFYESLELIKEKKLEVP---SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAID 172 (284)
Q Consensus 98 ~~~~~~~a~~~l~~~~~~~~~~~~---~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~~ad 172 (284)
|++.+++|+..+.+. .+ +++|+++|++... .++++.++|.|+|.+ +++..+|+.||
T Consensus 256 g~~~li~A~~~l~~~-------~~~~~~~~l~ivG~~~~~------------~~l~~~~~v~f~G~~~~~~l~~~~~~ad 316 (413)
T 2x0d_A 256 AFTLIVEALKIFVQK-------YDRSNEWKIISVGEKHKD------------IALGKGIHLNSLGKLTLEDYADLLKRSS 316 (413)
T ss_dssp CHHHHHHHHHHHHHH-------CTTGGGCEEEEEESCCCC------------EEEETTEEEEEEESCCHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHh-------CCCCCceEEEEEcCCchh------------hhcCCcCcEEEcCCCCHHHHHHHHHhCC
Confidence 999999999988653 24 4899999987532 245667799999986 79999999999
Q ss_pred EEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHH
Q 023290 173 VLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGY 252 (284)
Q Consensus 173 ~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 252 (284)
++++||. .|+||++++||||||+|||+++ +|..+++.++.+|++++++| +++++++|.++++|++.+++ +++
T Consensus 317 v~v~pS~--~E~~g~~~lEAmA~G~PVV~~~-~g~~e~v~~~~~G~lv~~~d--~~~la~ai~~ll~~~~~~~~---~~~ 388 (413)
T 2x0d_A 317 IGISLMI--SPHPSYPPLEMAHFGLRVITNK-YENKDLSNWHSNIVSLEQLN--PENIAETLVELCMSFNNRDV---DKK 388 (413)
T ss_dssp EEECCCS--SSSCCSHHHHHHHTTCEEEEEC-BTTBCGGGTBTTEEEESSCS--HHHHHHHHHHHHHHTC----------
T ss_pred EEEEecC--CCCCCcHHHHHHhCCCcEEEeC-CCcchhhhcCCCEEEeCCCC--HHHHHHHHHHHHcCHHHHHH---hHH
Confidence 9999998 8999999999999999999954 56789999999999999998 99999999999998887766 455
Q ss_pred HHHHHhcCHHHHHHHHHHHHHHHHH
Q 023290 253 ERVKEIFQEHHMAERIAVVLKEVLK 277 (284)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (284)
+.+ +.|+|+...++ .++|++++.
T Consensus 389 ~~~-~~~~W~~~~~~-~~~~~~l~~ 411 (413)
T 2x0d_A 389 ESS-NMMFYINEFNE-FSFIKEIEE 411 (413)
T ss_dssp CCB-SCGGGCCCC----TTHHHHHT
T ss_pred HHH-HhCCHHHHHHH-HHHHHHHHh
Confidence 555 46999999887 677777654
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=8.2e-29 Score=221.77 Aligned_cols=217 Identities=14% Similarity=0.143 Sum_probs=180.6
Q ss_pred CcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccccc
Q 023290 16 LVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSR 95 (284)
Q Consensus 16 ~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~~ 95 (284)
.+|.++++|.....+ .+++.+|||.+.+........ +...|+++|++++.+++ ++|++.+
T Consensus 328 ~~d~~i~~s~~~~~~------------~~~i~~ipn~~~~~~~~~~~~-------~~~~r~~~~~~~~~~v~-~~g~~~~ 387 (568)
T 2vsy_A 328 LGDAFALPPALEPFY------------SEHVLRLQGAFQPSDTSRVVA-------EPPSRTQCGLPEQGVVL-CCFNNSY 387 (568)
T ss_dssp EECTTTSCTTTGGGC------------SSEEEECSSCSCCCCTTCCCC-------CCCCTGGGTCCTTSCEE-EECCCGG
T ss_pred EECCCcCCcccccCC------------cceeEcCCCcCCCCCCCCCCC-------CCCCccccCCCCCCEEE-EeCCccc
Confidence 467888888765432 267999999654432111101 12246778887766654 8999999
Q ss_pred cccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEe-cCCCCChHHHHHHHHHHHHcCCC-CcEEEeccc--cCHHHHHhhc
Q 023290 96 GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIG-SDMNAQTKFESELRNYVMQKKIQ-DRVHFVNKT--LTVAPYLAAI 171 (284)
Q Consensus 96 ~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G-~~~~~~~~~~~~l~~~~~~~~~~-~~v~~~~~~--~~~~~~~~~a 171 (284)
||++.+++++..+.+ +.|+++|+|+| +++ ..+.+++.++++++. ++|.|+|++ +++..+|+.|
T Consensus 388 -K~~~~li~a~~~l~~-------~~~~~~l~i~G~~g~-----~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~a 454 (568)
T 2vsy_A 388 -KLNPQSMARMLAVLR-------EVPDSVLWLLSGPGE-----ADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHA 454 (568)
T ss_dssp -GCCHHHHHHHHHHHH-------HCTTCEEEEECCSTT-----HHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGC
T ss_pred -cCCHHHHHHHHHHHH-------hCCCcEEEEecCCHH-----HHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcC
Confidence 999999999999866 33899999999 554 788999999999998 899999998 4899999999
Q ss_pred cEEEEcCCCCcCccchhHHHHHhcCCCEEE-------cCCC-------CcceeeecCCceeeecCCCCChHHHHHHHHHH
Q 023290 172 DVLVQNSQAWGECFGRITIEAMAFQLPVLG-------TAAG-------GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKL 237 (284)
Q Consensus 172 d~~~~ps~~~~e~~~~~~~Eama~G~Pvi~-------~~~~-------~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l 237 (284)
|++++||. + |+|++++|||+||+|||+ ++.+ +..+++.+ | +++++++|..+
T Consensus 455 dv~v~ps~--~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~----------~--~~~la~~i~~l 519 (568)
T 2vsy_A 455 DLFLDTHP--Y-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA----------D--DAAFVAKAVAL 519 (568)
T ss_dssp SEEECCSS--S-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS----------S--HHHHHHHHHHH
T ss_pred CEEeeCCC--C-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC----------C--HHHHHHHHHHH
Confidence 99999998 7 999999999999999999 9998 88888744 4 99999999999
Q ss_pred hhCHHHHHHHHHHHHHHH--HHhcCHHHHHHHHHHHHHHHHHhhc
Q 023290 238 ATHVERRLTMGKRGYERV--KEIFQEHHMAERIAVVLKEVLKKSK 280 (284)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (284)
++|++.++++++++++.+ .+.|+|+.+++++.++|++++.+..
T Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~~~ 564 (568)
T 2vsy_A 520 ASDPAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARRHG 564 (568)
T ss_dssp HHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHTTT
T ss_pred hcCHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988 6789999999999999999987653
|
| >3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-26 Score=200.44 Aligned_cols=246 Identities=12% Similarity=0.036 Sum_probs=188.0
Q ss_pred ccccCCcccccccchhhHHHHHHHHHHHh-cccC-------------CCeEEEecCCccccchhhhhhhHHHHHHHHHHH
Q 023290 11 VKHLPLVAGAMIDSHVTAEYWKNRTRERL-RIKM-------------PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRE 76 (284)
Q Consensus 11 ~~~~~~~~~~i~~s~~~~~~~~~~~~~~~-~~~~-------------~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~ 76 (284)
.+.+-.+|.+.+.+...++.+.+.+.+.+ |... .++.++|+|+|++.+.+.... .+..+|+
T Consensus 202 l~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~-----~~~~lr~ 276 (496)
T 3t5t_A 202 LHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQ-----LPEGIEE 276 (496)
T ss_dssp HHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CC-----CCTTHHH
T ss_pred HHHHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHH-----HHHHHHH
Confidence 34555788899988888877776555555 4321 267899999999988754321 1255777
Q ss_pred HhCCCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChH----HHHHHHHHHHHcC--
Q 023290 77 SLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTK----FESELRNYVMQKK-- 150 (284)
Q Consensus 77 ~~~~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~----~~~~l~~~~~~~~-- 150 (284)
+++ ++.+|+++||+.+.||+..+++|+ ++.+..++. .++.|+++|.+...+.+ +...+++++.+.+
T Consensus 277 ~~~---~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~----~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~ 348 (496)
T 3t5t_A 277 WAD---GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGL----EKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAE 348 (496)
T ss_dssp HHT---TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSC----TTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HhC---CceEEEEcccCccccCHHHHHHHH-HHHHhCccc----ceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccc
Confidence 777 577888999999999999999999 887643211 14678888864433322 3444555554432
Q ss_pred --CCCcEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcC---CCEEEcCCCCcceeeecCCceeeecCC
Q 023290 151 --IQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQ---LPVLGTAAGGTTEIVVNGTTGLLHPVG 223 (284)
Q Consensus 151 --~~~~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G---~Pvi~~~~~~~~e~v~~~~~g~~~~~~ 223 (284)
.. .|.|++.. +++..+|+.||++++||. .||||++++|||||| .|+|+|..+|..+.+ +.+|++++|.
T Consensus 349 ~g~~-~V~f~g~v~~~el~aly~~ADv~vv~Sl--rEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l--~~~allVnP~ 423 (496)
T 3t5t_A 349 LGSD-TVRIDNDNDVNHTIACFRRADLLIFNST--VDGQNLSTFEAPLVNERDADVILSETCGAAEVL--GEYCRSVNPF 423 (496)
T ss_dssp HCTT-SEEEEECCCHHHHHHHHHHCSEEEECCS--SBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHH--GGGSEEECTT
T ss_pred cCCc-CEEEeCCCCHHHHHHHHHhccEEEECcc--cccCChhHHHHHHhCCCCCCEEEeCCCCCHHHh--CCCEEEECCC
Confidence 22 68898874 789999999999999999 999999999999996 899999988888877 3479999999
Q ss_pred CCChHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 023290 224 KEGITPLAKNIVKLATH-VERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK 277 (284)
Q Consensus 224 d~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (284)
| +++++++|.+++++ +++++++.++.++.+. .++....++.+++.+.....
T Consensus 424 D--~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~-~~d~~~W~~~fl~~L~~~~~ 475 (496)
T 3t5t_A 424 D--LVEQAEAISAALAAGPRQRAEAAARRRDAAR-PWTLEAWVQAQLDGLAADHA 475 (496)
T ss_dssp B--HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHT-TCBHHHHHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHhhccc
Confidence 9 99999999999984 5788888899998886 59999999999998877644
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
Probab=99.95 E-value=6.3e-28 Score=183.89 Aligned_cols=152 Identities=22% Similarity=0.288 Sum_probs=132.5
Q ss_pred hCCCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHH--HcCCCCcE
Q 023290 78 LGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVM--QKKIQDRV 155 (284)
Q Consensus 78 ~~~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~--~~~~~~~v 155 (284)
+.+++++++|+|+|++.+.||++.+++++..+ ++++|+++|.+.. .+.+++.++ .+++.++|
T Consensus 17 ~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l-----------~~~~l~i~G~~~~-----~~~l~~~~~~~~~~l~~~v 80 (177)
T 2f9f_A 17 FKFKCYGDFWLSVNRIYPEKRIELQLEVFKKL-----------QDEKLYIVGWFSK-----GDHAERYARKIMKIAPDNV 80 (177)
T ss_dssp CCCCCCCSCEEEECCSSGGGTHHHHHHHHHHC-----------TTSCEEEEBCCCT-----TSTHHHHHHHHHHHSCTTE
T ss_pred cccCCCCCEEEEEeccccccCHHHHHHHHHhC-----------CCcEEEEEecCcc-----HHHHHHHHHhhhcccCCcE
Confidence 44567788899999999999999999999876 6889999998763 356777777 77888899
Q ss_pred EEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHH
Q 023290 156 HFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKN 233 (284)
Q Consensus 156 ~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~ 233 (284)
.++|++ +++..+|+.||++++||. .|++|++++|||++|+|||+++.++..+++.++.+|+++ +.| +++++++
T Consensus 81 ~~~g~~~~~e~~~~~~~adi~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~-~~d--~~~l~~~ 155 (177)
T 2f9f_A 81 KFLGSVSEEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-NAD--VNEIIDA 155 (177)
T ss_dssp EEEESCCHHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-CSC--HHHHHHH
T ss_pred EEeCCCCHHHHHHHHHhCCEEEeCCC--cCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEe-CCC--HHHHHHH
Confidence 999998 459999999999999999 899999999999999999999999999999999999999 777 9999999
Q ss_pred HHHHhhCHHH-HHHHHHH
Q 023290 234 IVKLATHVER-RLTMGKR 250 (284)
Q Consensus 234 i~~l~~~~~~-~~~~~~~ 250 (284)
|.++++|++. ++++.++
T Consensus 156 i~~l~~~~~~~~~~~~~~ 173 (177)
T 2f9f_A 156 MKKVSKNPDKFKKDCFRR 173 (177)
T ss_dssp HHHHHHCTTTTHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHH
Confidence 9999998875 4444333
|
| >2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=7.7e-28 Score=206.64 Aligned_cols=196 Identities=15% Similarity=0.112 Sum_probs=158.5
Q ss_pred ccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEe
Q 023290 11 VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII 90 (284)
Q Consensus 11 ~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~ 90 (284)
...++.+|.++++|....+.+.+ .+ ++.+||||+|.+.+.+.... . .++.++++|+
T Consensus 173 ~~~~~~ad~vi~~S~~~~~~~~~-----~~----~i~vipngvd~~~f~~~~~~--------------~-~~~~~~i~~v 228 (406)
T 2hy7_A 173 DRVAPTLDVIALVSPAMAAEVVS-----RD----NVFHVGHGVDHNLDQLGDPS--------------P-YAEGIHAVAV 228 (406)
T ss_dssp HHHGGGCSEEEESCGGGGGGCSC-----ST----TEEECCCCBCTTHHHHHCSC--------------S-CCSSEEEEEE
T ss_pred HHHHHhCCEEEEcCHHHHHHHHh-----cC----CEEEEcCCcChHhcCccccc--------------c-cCCCcEEEEE
Confidence 34567899999999998887443 12 89999999998876543210 0 1234789999
Q ss_pred ccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHH
Q 023290 91 NSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYL 168 (284)
Q Consensus 91 g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~ 168 (284)
|++.+.||+ ++++ .+ ..++++|+|+|+|+ ++++++.++|.|+|.+ +++..+|
T Consensus 229 Grl~~~Kg~---~~~l---~~-------~~~~~~l~ivG~g~-------------~~~~~l~~~V~f~G~~~~~~l~~~~ 282 (406)
T 2hy7_A 229 GSMLFDPEF---FVVA---SK-------AFPQVTFHVIGSGM-------------GRHPGYGDNVIVYGEMKHAQTIGYI 282 (406)
T ss_dssp CCTTBCHHH---HHHH---HH-------HCTTEEEEEESCSS-------------CCCTTCCTTEEEECCCCHHHHHHHH
T ss_pred eccccccCH---HHHH---HH-------hCCCeEEEEEeCch-------------HHhcCCCCCEEEcCCCCHHHHHHHH
Confidence 999999998 3333 22 22899999999863 4556778899999997 6899999
Q ss_pred hhccEEEEcCCCCcCccchhHHHHH-------hcCCCEEEcCCCCcceeeecCCceee-ecCCCCChHHHHHHHHHHhhC
Q 023290 169 AAIDVLVQNSQAWGECFGRITIEAM-------AFQLPVLGTAAGGTTEIVVNGTTGLL-HPVGKEGITPLAKNIVKLATH 240 (284)
Q Consensus 169 ~~ad~~~~ps~~~~e~~~~~~~Eam-------a~G~Pvi~~~~~~~~e~v~~~~~g~~-~~~~d~~~~~~~~~i~~l~~~ 240 (284)
+.||++++||. .|+||++++||| |||+|||+|+. +.++.+|++ ++++| +++++++|.+++++
T Consensus 283 ~~adv~v~ps~--~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l~v~~~d--~~~la~ai~~ll~~ 352 (406)
T 2hy7_A 283 KHARFGIAPYA--SEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRFGYTPGN--ADSVIAAITQALEA 352 (406)
T ss_dssp HTCSEEECCBS--CSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEEEECTTC--HHHHHHHHHHHHHC
T ss_pred HhcCEEEECCC--cccCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEEEeCCCC--HHHHHHHHHHHHhC
Confidence 99999999999 899999999999 99999999987 567889999 99998 99999999999998
Q ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH--HHHHH
Q 023290 241 VERRLTMGKRGYERVKEIFQEHHMAERIAVV--LKEVL 276 (284)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 276 (284)
++ + ...+.|+|+.+++++.++ |.++.
T Consensus 353 ~~---------~-~~~~~~sw~~~a~~~~~~~~y~~~~ 380 (406)
T 2hy7_A 353 PR---------V-RYRQCLNWSDTTDRVLDPRAYPETR 380 (406)
T ss_dssp CC---------C-CCSCCCBHHHHHHHHHCGGGSGGGB
T ss_pred cc---------h-hhhhcCCHHHHHHHHHHhhcccccC
Confidence 76 1 234679999999999999 76543
|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.6e-27 Score=201.17 Aligned_cols=235 Identities=11% Similarity=0.072 Sum_probs=173.5
Q ss_pred CCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhC-CCC-CCeEEEEecc
Q 023290 15 PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLG-VRN-EDLLFAIINS 92 (284)
Q Consensus 15 ~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~-~~~~i~~~g~ 92 (284)
+.+|.+++.|....+.+.+ +|++.+++.+++||+.................+..+++++| +++ +.++++++|+
T Consensus 140 ~~~d~ii~~s~~~~~~l~~-----~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr 214 (384)
T 1vgv_A 140 HLAMYHFSPTETSRQNLLR-----ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHR 214 (384)
T ss_dssp TTCSEEEESSHHHHHHHHH-----TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCC
T ss_pred hhccEEEcCcHHHHHHHHH-----cCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCCCCCEEEEEeCC
Confidence 5589999999988776543 57777889999999532221111100000001235677788 744 4567889999
Q ss_pred cccc-ccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHh
Q 023290 93 VSRG-KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLA 169 (284)
Q Consensus 93 ~~~~-k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~ 169 (284)
+.+. ||++.+++|+..+.+. .+++++++.++..+ ...+.+++.+. ..++|.|+|.. +++..+|+
T Consensus 215 ~~~~~kg~~~li~a~~~l~~~-------~~~~~l~i~~g~~~---~~~~~l~~~~~---~~~~v~~~g~~~~~~~~~~~~ 281 (384)
T 1vgv_A 215 RESFGRGFEEICHALADIATT-------HQDIQIVYPVHLNP---NVREPVNRILG---HVKNVILIDPQEYLPFVWLMN 281 (384)
T ss_dssp BSSCCHHHHHHHHHHHHHHHH-------CTTEEEEEECCBCH---HHHHHHHHHHT---TCTTEEEECCCCHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHhh-------CCCeEEEEEcCCCH---HHHHHHHHHhh---cCCCEEEeCCCCHHHHHHHHH
Confidence 9876 9999999999988652 37899888643211 24455555543 23589997653 68999999
Q ss_pred hccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCC-CCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHH
Q 023290 170 AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA-GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMG 248 (284)
Q Consensus 170 ~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~-~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~ 248 (284)
.||++++|| |..++|||++|+|||+++. ++..++++++ +|+++++ | +++++++|.++++|++.+++|+
T Consensus 282 ~ad~~v~~S-------g~~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv~~-d--~~~la~~i~~ll~d~~~~~~~~ 350 (384)
T 1vgv_A 282 HAWLILTDS-------GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGT-D--KQRIVEEVTRLLKDENEYQAMS 350 (384)
T ss_dssp HCSEEEESS-------STGGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEECS-S--HHHHHHHHHHHHHCHHHHHHHH
T ss_pred hCcEEEECC-------cchHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEeCC-C--HHHHHHHHHHHHhChHHHhhhh
Confidence 999999998 2348999999999999986 8889998887 9999987 5 9999999999999999999999
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHhh
Q 023290 249 KRGYERVKEIFQEHHMAERIAVVLKEVLKKS 279 (284)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (284)
+++++.. +.++|+.+++.+.++++++.+.+
T Consensus 351 ~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~ 380 (384)
T 1vgv_A 351 RAHNPYG-DGQACSRILEALKNNRISLGSHH 380 (384)
T ss_dssp SSCCTTC-CSCHHHHHHHHHHHTCCCC----
T ss_pred hccCCCc-CCCHHHHHHHHHHHHHHhhcccc
Confidence 9887765 57999999999999887776644
|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-26 Score=197.28 Aligned_cols=220 Identities=15% Similarity=0.099 Sum_probs=166.2
Q ss_pred CcccccccchhhHHHHHHHHHHHhcccCCCeEEEecC-CccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecccc
Q 023290 16 LVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLG-NSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS 94 (284)
Q Consensus 16 ~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~ 94 (284)
.+|.+++.|....+.+.+ +|++.+++.+++|| +|...+...... +..+++++ +++.++++++|++.
T Consensus 150 ~~d~ii~~s~~~~~~~~~-----~g~~~~~i~vi~n~~~d~~~~~~~~~~------~~~~~~~~--~~~~~vl~~~gr~~ 216 (375)
T 3beo_A 150 MADLHFSPTAKSATNLQK-----ENKDESRIFITGNTAIDALKTTVKETY------SHPVLEKL--GNNRLVLMTAHRRE 216 (375)
T ss_dssp HCSEEEESSHHHHHHHHH-----TTCCGGGEEECCCHHHHHHHHHCCSSC------CCHHHHTT--TTSEEEEEECCCGG
T ss_pred hhheeeCCCHHHHHHHHH-----cCCCcccEEEECChhHhhhhhhhhhhh------hHHHHHhc--cCCCeEEEEecccc
Confidence 388999999988776543 57777889999999 776544322100 12234444 34566778999988
Q ss_pred cc-ccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHhhc
Q 023290 95 RG-KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAI 171 (284)
Q Consensus 95 ~~-k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~~a 171 (284)
+. ||++.+++|+..+.+ +.+++++++ |.++. ....+.++++. +..++|.|+|.. .++..+|+.|
T Consensus 217 ~~~K~~~~li~a~~~l~~-------~~~~~~~i~-~~g~~--~~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~a 283 (375)
T 3beo_A 217 NLGEPMRNMFRAIKRLVD-------KHEDVQVVY-PVHMN--PVVRETANDIL---GDYGRIHLIEPLDVIDFHNVAARS 283 (375)
T ss_dssp GTTHHHHHHHHHHHHHHH-------HCTTEEEEE-ECCSC--HHHHHHHHHHH---TTCTTEEEECCCCHHHHHHHHHTC
T ss_pred cchhHHHHHHHHHHHHHh-------hCCCeEEEE-eCCCC--HHHHHHHHHHh---hccCCEEEeCCCCHHHHHHHHHhC
Confidence 75 999999999998865 237888655 54431 12233333332 333589997764 4899999999
Q ss_pred cEEEEcCCCCcCccchhHHHHHhcCCCEEEcCC-CCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHH
Q 023290 172 DVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA-GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKR 250 (284)
Q Consensus 172 d~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~-~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~ 250 (284)
|++++|| |.+++|||++|+|||+++. ++..+++.++ +|+++++ | +++++++|.++++|++.+++|+++
T Consensus 284 d~~v~~s-------g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v~~-d--~~~la~~i~~ll~~~~~~~~~~~~ 352 (375)
T 3beo_A 284 YLMLTDS-------GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLAGT-D--EETIFSLADELLSDKEAHDKMSKA 352 (375)
T ss_dssp SEEEECC-------HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEEECCS-C--HHHHHHHHHHHHHCHHHHHHHCCC
T ss_pred cEEEECC-------CChHHHHHhcCCCEEEecCCCCCceeecCC-ceEEcCC-C--HHHHHHHHHHHHhChHhHhhhhhc
Confidence 9999987 4569999999999999964 8899999877 9999976 6 999999999999999999999998
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHH
Q 023290 251 GYERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~ 273 (284)
+++.. +.|+|+.+++.+.++++
T Consensus 353 ~~~~~-~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 353 SNPYG-DGRASERIVEAILKHFN 374 (375)
T ss_dssp CCTTC-CSCHHHHHHHHHHHHTT
T ss_pred CCCCC-CCcHHHHHHHHHHHHhh
Confidence 88765 57999999998887763
|
| >1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-25 Score=187.75 Aligned_cols=197 Identities=14% Similarity=0.062 Sum_probs=156.6
Q ss_pred CeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCe-EEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCe
Q 023290 45 DTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDL-LFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSV 123 (284)
Q Consensus 45 ~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~ 123 (284)
++.+++||++.+.+.... .+++++++++.. ++++.|++.+.|+.+.+++++..+. .++
T Consensus 155 ~~~~i~n~v~~~~~~~~~-----------~~~~~~~~~~~~~il~~~g~~~~~k~~~~li~a~~~l~----------~~~ 213 (364)
T 1f0k_A 155 NAEVVGNPVRTDVLALPL-----------PQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLG----------DSV 213 (364)
T ss_dssp SCEECCCCCCHHHHTSCC-----------HHHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHG----------GGE
T ss_pred CceEeCCccchhhcccch-----------hhhhcccCCCCcEEEEEcCchHhHHHHHHHHHHHHHhc----------CCc
Confidence 688999999877654321 134566666655 5556679999999999999998762 257
Q ss_pred E-EEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEc
Q 023290 124 H-AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT 202 (284)
Q Consensus 124 ~-l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~ 202 (284)
+ ++++|.+. .+.+++.++++++. +|.|+|+++++..+|+.||++++||. |++++|||++|+|||++
T Consensus 214 ~~l~i~G~~~------~~~l~~~~~~~~~~-~v~~~g~~~~~~~~~~~ad~~v~~sg------~~~~~EAma~G~Pvi~~ 280 (364)
T 1f0k_A 214 TIWHQSGKGS------QQSVEQAYAEAGQP-QHKVTEFIDDMAAAYAWADVVVCRSG------ALTVSEIAAAGLPALFV 280 (364)
T ss_dssp EEEEECCTTC------HHHHHHHHHHTTCT-TSEEESCCSCHHHHHHHCSEEEECCC------HHHHHHHHHHTCCEEEC
T ss_pred EEEEEcCCch------HHHHHHHHhhcCCC-ceEEecchhhHHHHHHhCCEEEECCc------hHHHHHHHHhCCCEEEe
Confidence 7 56678764 36788888888774 79999999999999999999999982 89999999999999999
Q ss_pred CCCCcc--------eeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 023290 203 AAGGTT--------EIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 274 (284)
Q Consensus 203 ~~~~~~--------e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (284)
+.++.. ++++++ .|++++++|.++++++++|.++ |++.++++++++++.+. .|+|+.+++++.++|++
T Consensus 281 ~~~g~~~~q~~~~~~~~~~g-~g~~~~~~d~~~~~la~~i~~l--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 281 PFQHKDRQQYWNALPLEKAG-AAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAASI-PDATERVANEVSRVARA 356 (364)
T ss_dssp CCCCTTCHHHHHHHHHHHTT-SEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTCC-TTHHHHHHHHHHHHHTT
T ss_pred eCCCCchhHHHHHHHHHhCC-cEEEeccccCCHHHHHHHHHhc--CHHHHHHHHHHHHHhhc-cCHHHHHHHHHHHHHHH
Confidence 998764 455444 5999998665589999999998 99999999999998764 79999999999999976
Q ss_pred HHHhh
Q 023290 275 VLKKS 279 (284)
Q Consensus 275 ~~~~~ 279 (284)
.-..+
T Consensus 357 ~~~~~ 361 (364)
T 1f0k_A 357 LEHHH 361 (364)
T ss_dssp C----
T ss_pred HHhhc
Confidence 55443
|
| >2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-25 Score=188.61 Aligned_cols=207 Identities=9% Similarity=0.055 Sum_probs=160.0
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEec
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIIN 91 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g 91 (284)
..++.+|.+++.|+...+.+.+ +|++ ++.+++|+........ . .. + ..+++++.|
T Consensus 149 ~~~~~~d~ii~~S~~~~~~l~~-----~g~~--ki~vi~n~~f~~~~~~-~-------------~~--l--~~~vi~~~~ 203 (374)
T 2xci_A 149 ILSKKFDLIIMRTQEDVEKFKT-----FGAK--RVFSCGNLKFICQKGK-G-------------IK--L--KGEFIVAGS 203 (374)
T ss_dssp HHHTTCSEEEESCHHHHHHHHT-----TTCC--SEEECCCGGGCCCCCS-C-------------CC--C--SSCEEEEEE
T ss_pred HHHHhCCEEEECCHHHHHHHHH-----cCCC--eEEEcCCCccCCCcCh-h-------------hh--h--cCCEEEEEe
Confidence 3457799999999998887543 4665 8999999732111000 0 00 1 124555555
Q ss_pred cccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCC--------CcEEEeccccC
Q 023290 92 SVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ--------DRVHFVNKTLT 163 (284)
Q Consensus 92 ~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~--------~~v~~~~~~~~ 163 (284)
+ ..||.+.+++|+..+.+ ++|+++|+|+|.++. ..+.++++++++++. ++|.+.|..++
T Consensus 204 ~--~~k~~~~ll~A~~~l~~-------~~p~~~lvivG~g~~----~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~d 270 (374)
T 2xci_A 204 I--HTGEVEIILKAFKEIKK-------TYSSLKLILVPRHIE----NAKIFEKKARDFGFKTSFFENLEGDVILVDRFGI 270 (374)
T ss_dssp E--CGGGHHHHHHHHHHHHT-------TCTTCEEEEEESSGG----GHHHHHHHHHHTTCCEEETTCCCSSEEECCSSSC
T ss_pred C--CCchHHHHHHHHHHHHh-------hCCCcEEEEECCCHH----HHHHHHHHHHHCCCceEEecCCCCcEEEECCHHH
Confidence 3 46899999999998865 448999999998751 235788889988876 46888888899
Q ss_pred HHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEc-CCCCcceeeecC-CceeeecCCCCChHHHHHHHHHHhhCH
Q 023290 164 VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT-AAGGTTEIVVNG-TTGLLHPVGKEGITPLAKNIVKLATHV 241 (284)
Q Consensus 164 ~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~-~~~~~~e~v~~~-~~g~~~~~~d~~~~~~~~~i~~l~~~~ 241 (284)
+..+|+.||++++||.. .+++|++++||||||+|||++ +.++.++.+++. .+|++++++| +++++++|.++++|
T Consensus 271 l~~~y~~aDv~vl~ss~-~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d--~~~La~ai~~ll~d- 346 (374)
T 2xci_A 271 LKELYPVGKIAIVGGTF-VNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVKN--ETELVTKLTELLSV- 346 (374)
T ss_dssp HHHHGGGEEEEEECSSS-SSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEECCS--HHHHHHHHHHHHHS-
T ss_pred HHHHHHhCCEEEECCcc-cCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEeCC--HHHHHHHHHHHHhH-
Confidence 99999999998888652 467889999999999999975 678888887653 5788888888 99999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcC
Q 023290 242 ERRLTMGKRGYERVKEIFQ 260 (284)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~ 260 (284)
+.+++|++++++.+.++++
T Consensus 347 ~~r~~mg~~ar~~~~~~~g 365 (374)
T 2xci_A 347 KKEIKVEEKSREIKGCYLE 365 (374)
T ss_dssp CCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccc
Confidence 9999999999998876544
|
| >1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 | Back alignment and structure |
|---|
Probab=99.86 E-value=6.4e-22 Score=168.21 Aligned_cols=218 Identities=12% Similarity=0.029 Sum_probs=156.6
Q ss_pred CCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecccc
Q 023290 15 PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS 94 (284)
Q Consensus 15 ~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~ 94 (284)
+.++.+++.|....+++.+ .|++.+++.+++|+........ .. +..+++++ .++.++++++|++.
T Consensus 145 ~~~~~~~~~s~~~~~~l~~-----~g~~~~ki~vi~n~~~d~~~~~-~~-------~~~~~~~~--~~~~~vl~~~gr~~ 209 (376)
T 1v4v_A 145 VLTDLDFAPTPLAKANLLK-----EGKREEGILVTGQTGVDAVLLA-AK-------LGRLPEGL--PEGPYVTVTMHRRE 209 (376)
T ss_dssp HHCSEEEESSHHHHHHHHT-----TTCCGGGEEECCCHHHHHHHHH-HH-------HCCCCTTC--CSSCEEEECCCCGG
T ss_pred HHhceeeCCCHHHHHHHHH-----cCCCcceEEEECCchHHHHhhh-hh-------hhHHHHhc--CCCCEEEEEeCccc
Confidence 3477888888887776443 4777788999998753221110 00 01122223 24556777899988
Q ss_pred ccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEE-ecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHhhc
Q 023290 95 RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAI 171 (284)
Q Consensus 95 ~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~-G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~~a 171 (284)
..||++.+++|+..+.+ +++++++++. |.++ ...+.+++++.. .++|.|+|.. .++..+|+.|
T Consensus 210 ~~k~~~~ll~a~~~l~~-------~~~~~~lv~~~g~~~----~~~~~l~~~~~~---~~~v~~~g~~g~~~~~~~~~~a 275 (376)
T 1v4v_A 210 NWPLLSDLAQALKRVAE-------AFPHLTFVYPVHLNP----VVREAVFPVLKG---VRNFVLLDPLEYGSMAALMRAS 275 (376)
T ss_dssp GGGGHHHHHHHHHHHHH-------HCTTSEEEEECCSCH----HHHHHHHHHHTT---CTTEEEECCCCHHHHHHHHHTE
T ss_pred chHHHHHHHHHHHHHHh-------hCCCeEEEEECCCCH----HHHHHHHHHhcc---CCCEEEECCCCHHHHHHHHHhC
Confidence 88899999999998865 2378888886 5432 135556655432 3589999543 3889999999
Q ss_pred cEEEEcCCCCcCccchhHHHHHhcCCCEEEc-CCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHH
Q 023290 172 DVLVQNSQAWGECFGRITIEAMAFQLPVLGT-AAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKR 250 (284)
Q Consensus 172 d~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~-~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~ 250 (284)
|+++.|| + |+ ++|||++|+|||++ +.++..++++++ +|++++. | +++++++|.++++|++.+++|+++
T Consensus 276 d~~v~~S----~--g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv~~-d--~~~la~~i~~ll~d~~~~~~~~~~ 344 (376)
T 1v4v_A 276 LLLVTDS----G--GL-QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLAGT-D--PEGVYRVVKGLLENPEELSRMRKA 344 (376)
T ss_dssp EEEEESC----H--HH-HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEECCS-C--HHHHHHHHHHHHTCHHHHHHHHHS
T ss_pred cEEEECC----c--CH-HHHHHHcCCCEEeccCCCcchhhhcCC-ceEECCC-C--HHHHHHHHHHHHhChHhhhhhccc
Confidence 9999987 1 34 88999999999987 467888877554 7898863 5 999999999999999999998864
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 023290 251 GYERVKEIFQEHHMAERIAVVLKEVLK 277 (284)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (284)
+ +.|.+...++++.+.+.++++
T Consensus 345 ~-----~~~~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 345 K-----NPYGDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp C-----CSSCCSCHHHHHHHHHHHHTT
T ss_pred C-----CCCCCChHHHHHHHHHHHHhc
Confidence 3 356777778888888887765
|
| >3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=9.6e-19 Score=145.57 Aligned_cols=194 Identities=9% Similarity=-0.015 Sum_probs=142.4
Q ss_pred ccccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEe
Q 023290 11 VKHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAII 90 (284)
Q Consensus 11 ~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~ 90 (284)
...++.+|.+++.|..+.+++.+ .|++..++.++++. +... ..+ ...+.++++++|+
T Consensus 128 ~~~y~~aD~Ii~~S~~~~~~l~~-----~G~~~~ki~~~~~~-~~~~--~~~---------------~~~~~~~~~i~ya 184 (339)
T 3rhz_A 128 IAYYNKADVVVAPSQKMIDKLRD-----FGMNVSKTVVQGMW-DHPT--QAP---------------MFPAGLKREIHFP 184 (339)
T ss_dssp HHHHTTCSEEEESCHHHHHHHHH-----TTCCCSEEEECCSC-CCCC--CCC---------------CCCCEEEEEEEEC
T ss_pred HHHHHHCCEEEECCHHHHHHHHH-----cCCCcCceeecCCC-CccC--ccc---------------ccccCCCcEEEEe
Confidence 34578999999999999888655 47766666544432 2111 000 0012356789999
Q ss_pred ccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHH
Q 023290 91 NSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYL 168 (284)
Q Consensus 91 g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~ 168 (284)
|++.....+.. + .++++|+++|+|+.. .++ +|.|+|++ +++..++
T Consensus 185 G~l~k~~~L~~----l-------------~~~~~f~ivG~G~~~---------------~l~-nV~f~G~~~~~el~~~l 231 (339)
T 3rhz_A 185 GNPERFSFVKE----W-------------KYDIPLKVYTWQNVE---------------LPQ-NVHKINYRPDEQLLMEM 231 (339)
T ss_dssp SCTTTCGGGGG----C-------------CCSSCEEEEESCCCC---------------CCT-TEEEEECCCHHHHHHHH
T ss_pred CCcchhhHHHh----C-------------CCCCeEEEEeCCccc---------------CcC-CEEEeCCCCHHHHHHHH
Confidence 99985322211 1 178999999998631 244 89999986 7899999
Q ss_pred hhccEEEEcCCC-----CcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHH
Q 023290 169 AAIDVLVQNSQA-----WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVER 243 (284)
Q Consensus 169 ~~ad~~~~ps~~-----~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~ 243 (284)
+.+|+.+..... ...++|.+++||||+|+|||+++.++..++++++.+|+.+++ .++++++|..+ +++.
T Consensus 232 ~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G~~~~~----~~e~~~~i~~l--~~~~ 305 (339)
T 3rhz_A 232 SQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIENNGLGWIVKD----VEEAIMKVKNV--NEDE 305 (339)
T ss_dssp HTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHTCEEEESS----HHHHHHHHHHC--CHHH
T ss_pred HhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHhCCeEEEeCC----HHHHHHHHHHh--CHHH
Confidence 999998876221 013568999999999999999999999999999999999873 78999999886 4677
Q ss_pred HHHHHHHHHHHHHHhcCHHHHHHH
Q 023290 244 RLTMGKRGYERVKEIFQEHHMAER 267 (284)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~ 267 (284)
+++|++++++... .+++..++++
T Consensus 306 ~~~m~~na~~~a~-~~~~~~f~k~ 328 (339)
T 3rhz_A 306 YIELVKNVRSFNP-ILRKGFFTRR 328 (339)
T ss_dssp HHHHHHHHHHHTH-HHHTTHHHHH
T ss_pred HHHHHHHHHHHHH-HhhccHHHHH
Confidence 8999999998754 4676666655
|
| >3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-18 Score=148.41 Aligned_cols=224 Identities=15% Similarity=0.176 Sum_probs=152.6
Q ss_pred CCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhC-CCCC-CeEEEEecc
Q 023290 15 PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLG-VRNE-DLLFAIINS 92 (284)
Q Consensus 15 ~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~-~~~i~~~g~ 92 (284)
+.++.+++.++...+++.+ .|++++++.+++|++.................+..+++++| ++++ ++++++.+|
T Consensus 165 ~~a~~~~~~se~~~~~l~~-----~G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR 239 (396)
T 3dzc_A 165 ALTQYHFAPTDTSRANLLQ-----ENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHR 239 (396)
T ss_dssp HTCSEEEESSHHHHHHHHH-----TTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSC
T ss_pred HhcCEEECCCHHHHHHHHH-----cCCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHhCccCCCCCEEEEEECC
Confidence 4667888888887776543 58888899999986532221111100000111367888999 4444 444445545
Q ss_pred cc-ccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEE-ecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHH
Q 023290 93 VS-RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYL 168 (284)
Q Consensus 93 ~~-~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~-G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~ 168 (284)
.. ..|+++.+++|+..+.+ +++++++++. |.++ ...+.++++ .+..++|.++++. .++..+|
T Consensus 240 ~~~~~~~~~~ll~A~~~l~~-------~~~~~~~v~~~g~~~----~~~~~l~~~---~~~~~~v~~~~~lg~~~~~~l~ 305 (396)
T 3dzc_A 240 RESFGGGFERICQALITTAE-------QHPECQILYPVHLNP----NVREPVNKL---LKGVSNIVLIEPQQYLPFVYLM 305 (396)
T ss_dssp BCCCTTHHHHHHHHHHHHHH-------HCTTEEEEEECCBCH----HHHHHHHHH---TTTCTTEEEECCCCHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHH-------hCCCceEEEEeCCCh----HHHHHHHHH---HcCCCCEEEeCCCCHHHHHHHH
Confidence 33 35788999999988865 3378998886 4321 133444433 2444689998876 5788999
Q ss_pred hhccEEEEcCCCCcCccchhHHHHHhcCCCEEEc-CCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHH
Q 023290 169 AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT-AAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTM 247 (284)
Q Consensus 169 ~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~-~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~ 247 (284)
+.||+++.+| + | ...|||++|+|+|++ +.++..+.+++| .++++.. | ++++++++..+++|++.+++|
T Consensus 306 ~~ad~vv~~S---G---g-~~~EA~a~G~PvV~~~~~~~~~e~v~~G-~~~lv~~-d--~~~l~~ai~~ll~d~~~~~~m 374 (396)
T 3dzc_A 306 DRAHIILTDS---G---G-IQEEAPSLGKPVLVMRETTERPEAVAAG-TVKLVGT-N--QQQICDALSLLLTDPQAYQAM 374 (396)
T ss_dssp HHCSEEEESC---S---G-GGTTGGGGTCCEEECCSSCSCHHHHHHT-SEEECTT-C--HHHHHHHHHHHHHCHHHHHHH
T ss_pred HhcCEEEECC---c---c-HHHHHHHcCCCEEEccCCCcchHHHHcC-ceEEcCC-C--HHHHHHHHHHHHcCHHHHHHH
Confidence 9999999887 1 3 338999999999998 677777888776 5677764 4 899999999999999999998
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHH
Q 023290 248 GKRGYERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (284)
++++. .|.....++++.+++.
T Consensus 375 ~~~~~-----~~~~~~aa~ri~~~l~ 395 (396)
T 3dzc_A 375 SQAHN-----PYGDGKACQRIADILA 395 (396)
T ss_dssp HTSCC-----TTCCSCHHHHHHHHHH
T ss_pred hhccC-----CCcCChHHHHHHHHHh
Confidence 87653 3555556666665553
|
| >3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-17 Score=143.15 Aligned_cols=219 Identities=16% Similarity=0.138 Sum_probs=150.6
Q ss_pred cccccccchhhHHHHHHHHHHHhcccCCCeEEEecCC-ccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccccc
Q 023290 17 VAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGN-SKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSR 95 (284)
Q Consensus 17 ~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~~ 95 (284)
++.+++.++...+.+.+ .|++++++.+++|+. |...+...... +...++++ +++++++++.+|...
T Consensus 170 a~~~~~~se~~~~~l~~-----~Gi~~~~i~vvGn~~~D~~~~~~~~~~------~~~~~~~l--~~~~~vlv~~~r~~~ 236 (403)
T 3ot5_A 170 ADIHFSPTKQAKENLLA-----EGKDPATIFVTGNTAIDALKTTVQKDY------HHPILENL--GDNRLILMTAHRREN 236 (403)
T ss_dssp CSEEEESSHHHHHHHHH-----TTCCGGGEEECCCHHHHHHHHHSCTTC------CCHHHHSC--TTCEEEEECCCCHHH
T ss_pred cCEEECCCHHHHHHHHH-----cCCCcccEEEeCCchHHHHHhhhhhhc------chHHHHhc--cCCCEEEEEeCcccc
Confidence 56677788877776544 588888999999864 33222111100 01334444 334555556666533
Q ss_pred -cccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHhhcc
Q 023290 96 -GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAID 172 (284)
Q Consensus 96 -~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~~ad 172 (284)
.++++.+++++..+.+ +++++++++.++..+ ...+.++++ ++..++|.++++. .++..+|+.||
T Consensus 237 ~~~~l~~ll~a~~~l~~-------~~~~~~~v~~~~~~~---~~~~~l~~~---~~~~~~v~l~~~l~~~~~~~l~~~ad 303 (403)
T 3ot5_A 237 LGEPMQGMFEAVREIVE-------SREDTELVYPMHLNP---AVREKAMAI---LGGHERIHLIEPLDAIDFHNFLRKSY 303 (403)
T ss_dssp HTTHHHHHHHHHHHHHH-------HCTTEEEEEECCSCH---HHHHHHHHH---HTTCTTEEEECCCCHHHHHHHHHHEE
T ss_pred cCcHHHHHHHHHHHHHH-------hCCCceEEEecCCCH---HHHHHHHHH---hCCCCCEEEeCCCCHHHHHHHHHhcC
Confidence 4778999999988866 337899888754221 133333333 3344689999987 48999999999
Q ss_pred EEEEcCCCCcCccchhHHHHHhcCCCEEEc-CCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHH
Q 023290 173 VLVQNSQAWGECFGRITIEAMAFQLPVLGT-AAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRG 251 (284)
Q Consensus 173 ~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~-~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~ 251 (284)
+++.+| |...+||+++|+|+|++ +.++..+.++.| +|+++.. | ++++++++.++++|++.+++|++++
T Consensus 304 ~vv~~S-------Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv~~-d--~~~l~~ai~~ll~~~~~~~~m~~~~ 372 (403)
T 3ot5_A 304 LVFTDS-------GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLIGT-N--KENLIKEALDLLDNKESHDKMAQAA 372 (403)
T ss_dssp EEEECC-------HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-SEEECCS-C--HHHHHHHHHHHHHCHHHHHHHHHSC
T ss_pred EEEECC-------ccHHHHHHHhCCCEEEecCCCcchhheeCC-cEEEcCC-C--HHHHHHHHHHHHcCHHHHHHHHhhc
Confidence 999776 23338999999999998 677777887655 7888875 5 9999999999999999998887654
Q ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHH
Q 023290 252 YERVKEIFQEHHMAERIAVVLKEVLK 277 (284)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (284)
. .|.....++++.+++.+.+.
T Consensus 373 ~-----~~g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 373 N-----PYGDGFAANRILAAIKSHFE 393 (403)
T ss_dssp C-----TTCCSCHHHHHHHHHHHHHT
T ss_pred C-----cccCCcHHHHHHHHHHHHhC
Confidence 3 35555666777777776665
|
| >3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.8e-15 Score=129.96 Aligned_cols=165 Identities=12% Similarity=0.117 Sum_probs=126.8
Q ss_pred CCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc
Q 023290 82 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 161 (284)
Q Consensus 82 ~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~ 161 (284)
++..++++.|+.. .++.+.+.+++..+.+ .++++++++++.... +.++ .+.++|.+.|+.
T Consensus 241 ~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~---------~~~~~~~~~g~~~~~----~~l~------~~~~~v~~~~~~ 300 (412)
T 3otg_A 241 ARPLVYLTLGTSS-GGTVEVLRAAIDGLAG---------LDADVLVASGPSLDV----SGLG------EVPANVRLESWV 300 (412)
T ss_dssp TSCEEEEECTTTT-CSCHHHHHHHHHHHHT---------SSSEEEEECCSSCCC----TTCC------CCCTTEEEESCC
T ss_pred CCCEEEEEcCCCC-cCcHHHHHHHHHHHHc---------CCCEEEEEECCCCCh----hhhc------cCCCcEEEeCCC
Confidence 3456778889886 6777777666666543 467777776654211 1111 245789999999
Q ss_pred cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceeeecCCceeeecCCCCChHHHHHHHHHH
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEGITPLAKNIVKL 237 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l 237 (284)
++..+|+.||++|.++- +++++|||++|+|+|+.+.++ +.+.+.+...|+++++++.++++++++|.++
T Consensus 301 -~~~~~l~~ad~~v~~~g------~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~l 373 (412)
T 3otg_A 301 -PQAALLPHVDLVVHHGG------SGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRL 373 (412)
T ss_dssp -CHHHHGGGCSEEEESCC------HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHH
T ss_pred -CHHHHHhcCcEEEECCc------hHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHH
Confidence 89999999999996653 479999999999999976553 5677778889999988733399999999999
Q ss_pred hhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 023290 238 ATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 274 (284)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (284)
++|++.++++++.+++... .++++.+++.+.+++.+
T Consensus 374 l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 374 LAEESYRAGARAVAAEIAA-MPGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHCHHHHHHHHHHHHHHHH-SCCHHHHHTTHHHHHC-
T ss_pred HhCHHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHhcc
Confidence 9999999999998887665 58999999998888753
|
| >3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.64 E-value=3.4e-15 Score=126.14 Aligned_cols=193 Identities=15% Similarity=0.066 Sum_probs=126.8
Q ss_pred CCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCe-EEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCC
Q 023290 44 PDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDL-LFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPS 122 (284)
Q Consensus 44 ~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~ 122 (284)
+++.++.|++..+.+.... .+.+++++++ ++++.|+....+..+.+.+++..+.. ..+
T Consensus 153 ~k~~~~g~pvr~~~~~~~~-------------~~~~~~~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~--------~~~ 211 (365)
T 3s2u_A 153 DKRLTTGNPVRGELFLDAH-------------ARAPLTGRRVNLLVLGGSLGAEPLNKLLPEALAQVPL--------EIR 211 (365)
T ss_dssp --CEECCCCCCGGGCCCTT-------------SSCCCTTSCCEEEECCTTTTCSHHHHHHHHHHHTSCT--------TTC
T ss_pred CcEEEECCCCchhhccchh-------------hhcccCCCCcEEEEECCcCCccccchhhHHHHHhccc--------ccc
Confidence 4566666766655543221 2234444544 44555777776666777777765422 134
Q ss_pred eEEEE-EecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEE
Q 023290 123 VHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLG 201 (284)
Q Consensus 123 ~~l~i-~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~ 201 (284)
+.++. +|.+ ..+.+.+..+..+. ++.+.++.+++.++|+.||++|+.+ .++++.|+|++|+|+|.
T Consensus 212 ~~vi~~~G~~------~~~~~~~~~~~~~~--~~~v~~f~~dm~~~l~~aDlvI~ra------G~~Tv~E~~a~G~P~Il 277 (365)
T 3s2u_A 212 PAIRHQAGRQ------HAEITAERYRTVAV--EADVAPFISDMAAAYAWADLVICRA------GALTVSELTAAGLPAFL 277 (365)
T ss_dssp CEEEEECCTT------THHHHHHHHHHTTC--CCEEESCCSCHHHHHHHCSEEEECC------CHHHHHHHHHHTCCEEE
T ss_pred eEEEEecCcc------ccccccceeccccc--ccccccchhhhhhhhccceEEEecC------CcchHHHHHHhCCCeEE
Confidence 45544 4433 34555556666554 6778899999999999999999543 26899999999999998
Q ss_pred cCCCCc--------ceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 023290 202 TAAGGT--------TEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 202 ~~~~~~--------~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (284)
.+.+.. .+.+.+...|++++..+.+++.++++|.++++|++.+++|++++++... ... ++++.+.+.
T Consensus 278 ip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~~~~~m~~~a~~~~~-~~a----a~~ia~~i~ 352 (365)
T 3s2u_A 278 VPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAK-PEA----TRTVVDACL 352 (365)
T ss_dssp CC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTHHHHHHHHHHHHTCC-TTH----HHHHHHHHH
T ss_pred eccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHhcCC-ccH----HHHHHHHHH
Confidence 765432 2345566678888877666999999999999999999999999887443 233 444444444
Q ss_pred HHH
Q 023290 274 EVL 276 (284)
Q Consensus 274 ~~~ 276 (284)
++.
T Consensus 353 ~la 355 (365)
T 3s2u_A 353 EVA 355 (365)
T ss_dssp HHC
T ss_pred HHH
Confidence 443
|
| >3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A | Back alignment and structure |
|---|
Probab=99.56 E-value=1.7e-14 Score=126.55 Aligned_cols=227 Identities=11% Similarity=0.065 Sum_probs=148.9
Q ss_pred cccCCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCC--CeEEEE
Q 023290 12 KHLPLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNE--DLLFAI 89 (284)
Q Consensus 12 ~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~i~~ 89 (284)
..++.+|.+++....... + ....+++..+|+..-. +.+....+ .+..++++++ .+++++
T Consensus 386 TGl~~iDY~i~D~~~~~~---~------~~ysEklirLP~~~~~--~~p~~~~p--------~r~~~~lp~~~G~v~Fg~ 446 (631)
T 3q3e_A 386 THSDFIEYVIVEDDYVGS---E------ECFSETLLRLPKDALP--YVPSALAP--------EKVDYLLRENPEVVNIGI 446 (631)
T ss_dssp CCCTTCCEEEEEGGGCCC---G------GGCSSEEEEECTTSSC--CCCCTTCC--------SSCCCCCCSCCSEEEEEE
T ss_pred cCcccCCEEEeCCCCCCc---c------cCceeeEEECCCCccc--cCCcccCC--------ccccccCCcCCCeEEEEE
Confidence 345677777776543211 1 1445677777764211 11111100 1244666654 577777
Q ss_pred eccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEE--EEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHH
Q 023290 90 INSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAV--IIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVA 165 (284)
Q Consensus 90 ~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~--i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~ 165 (284)
+++ ..|..+.++++|.++.++. |+..+. ++|.+.. ....+.+.+.+.|+.+++.|.|.. .+..
T Consensus 447 fn~--~~Ki~p~~l~~WarIL~~v-------P~s~L~l~~~g~~~g----~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~l 513 (631)
T 3q3e_A 447 AST--TMKLNPYFLEALKAIRDRA-------KVKVHFHFALGQSNG----ITHPYVERFIKSYLGDSATAHPHSPYHQYL 513 (631)
T ss_dssp EEC--STTCCHHHHHHHHHHHHHC-------SSEEEEEEEESSCCG----GGHHHHHHHHHHHHGGGEEEECCCCHHHHH
T ss_pred CCc--cccCCHHHHHHHHHHHHhC-------CCcEEEEEecCCCch----hhHHHHHHHHHcCCCccEEEcCCCCHHHHH
Confidence 776 4688999999999998754 666554 3564221 223333445567887899999986 5677
Q ss_pred HHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeee------cCCceeeecCCCCChHHHHHHHHHHhh
Q 023290 166 PYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVV------NGTTGLLHPVGKEGITPLAKNIVKLAT 239 (284)
Q Consensus 166 ~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~------~~~~g~~~~~~d~~~~~~~~~i~~l~~ 239 (284)
..|+.||+++.|+. + +.|++.+|||+||+|||+.....+.+.+. -|-.++++.. + .+++++...++..
T Consensus 514 a~y~~aDIfLDpfp--y-~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~-d--~eeYv~~Av~La~ 587 (631)
T 3q3e_A 514 RILHNCDMMVNPFP--F-GNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIAN-T--VDEYVERAVRLAE 587 (631)
T ss_dssp HHHHTCSEEECCSS--S-CCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEES-S--HHHHHHHHHHHHH
T ss_pred HHHhcCcEEEeCCc--c-cCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceecC-C--HHHHHHHHHHHhC
Confidence 88999999999986 5 44999999999999999987666555442 2333433322 2 8999999999999
Q ss_pred CHHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHh
Q 023290 240 HVERRLTMGKRGYERVKE--IFQEHHMAERIAVVLKEVLKK 278 (284)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 278 (284)
|++.+++++++.++.... .|+ ...+++.+.|++++.+
T Consensus 588 D~~~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~~~~ 626 (631)
T 3q3e_A 588 NHQERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEKLNA 626 (631)
T ss_dssp CHHHHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHHHHH
Confidence 999999999888876533 343 4455566666655543
|
| >2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.1e-14 Score=123.98 Aligned_cols=166 Identities=14% Similarity=0.150 Sum_probs=117.7
Q ss_pred CCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEE-EEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc
Q 023290 83 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHA-VIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 161 (284)
Q Consensus 83 ~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l-~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~ 161 (284)
+.++++++|++. .++.+.+.+++..+.. .+++++ +++|.+... +.++ .++++|.+.|+.
T Consensus 232 ~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~--------~~~~~~~~~~G~~~~~-----~~l~------~~~~~v~~~~~~ 291 (430)
T 2iyf_A 232 EKVVLVSLGSAF-TKQPAFYRECVRAFGN--------LPGWHLVLQIGRKVTP-----AELG------ELPDNVEVHDWV 291 (430)
T ss_dssp SEEEEEECTTTC-C-CHHHHHHHHHHHTT--------CTTEEEEEECC---CG-----GGGC------SCCTTEEEESSC
T ss_pred CCeEEEEcCCCC-CCcHHHHHHHHHHHhc--------CCCeEEEEEeCCCCCh-----HHhc------cCCCCeEEEecC
Confidence 456788899987 4444444443333311 146777 467765321 1111 245789999998
Q ss_pred cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceeeecCCceeeecCCCCChHHHHHHHHHH
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEGITPLAKNIVKL 237 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l 237 (284)
++. .+|+.||++|..+- .++++|||++|+|+|+.+.++ +.+.+.+...|+.++.++.++++++++|.++
T Consensus 292 ~~~-~~l~~ad~~v~~~G------~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~l 364 (430)
T 2iyf_A 292 PQL-AILRQADLFVTHAG------AGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALAL 364 (430)
T ss_dssp CHH-HHHTTCSEEEECCC------HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHH
T ss_pred CHH-HHhhccCEEEECCC------ccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHH
Confidence 666 89999999997552 378999999999999997654 3455667778999987743489999999999
Q ss_pred hhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 023290 238 ATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVL 276 (284)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (284)
++|++.++++++.+++... .++++.+++.+.+++.+..
T Consensus 365 l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~ 402 (430)
T 2iyf_A 365 VDDPEVARRLRRIQAEMAQ-EGGTRRAADLIEAELPARH 402 (430)
T ss_dssp HHCHHHHHHHHHHHHHHHH-HCHHHHHHHHHHTTSCC--
T ss_pred HcCHHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHhhccc
Confidence 9999999999988887654 5788999888888776544
|
| >4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii} | Back alignment and structure |
|---|
Probab=99.55 E-value=9.9e-15 Score=123.79 Aligned_cols=199 Identities=11% Similarity=0.101 Sum_probs=133.2
Q ss_pred CcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecccc-
Q 023290 16 LVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS- 94 (284)
Q Consensus 16 ~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~- 94 (284)
.++.+++.+....+.+.+ .|++++++.++.|+.-.......+ ...+..+++++|+++++++++..++..
T Consensus 146 ~a~~~~~~te~~~~~l~~-----~G~~~~~I~vtGnp~~D~~~~~~~-----~~~~~~~~~~lgl~~~~~iLvt~hr~e~ 215 (385)
T 4hwg_A 146 ISDVNITLTEHARRYLIA-----EGLPAELTFKSGSHMPEVLDRFMP-----KILKSDILDKLSLTPKQYFLISSHREEN 215 (385)
T ss_dssp HCSEEEESSHHHHHHHHH-----TTCCGGGEEECCCSHHHHHHHHHH-----HHHHCCHHHHTTCCTTSEEEEEECCC--
T ss_pred hhceeecCCHHHHHHHHH-----cCCCcCcEEEECCchHHHHHHhhh-----hcchhHHHHHcCCCcCCEEEEEeCCchh
Confidence 355666777776666444 588888999999865322211100 011356788999987676666666643
Q ss_pred --ccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHc-C---CCCcEEEeccc--cCHHH
Q 023290 95 --RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQK-K---IQDRVHFVNKT--LTVAP 166 (284)
Q Consensus 95 --~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~-~---~~~~v~~~~~~--~~~~~ 166 (284)
..+++..+++++.++.+. + ++.+++... + .+++.+++. + ..++|.+.++. .++..
T Consensus 216 ~~~~~~l~~ll~al~~l~~~-------~-~~~vv~p~~-p--------~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~ 278 (385)
T 4hwg_A 216 VDVKNNLKELLNSLQMLIKE-------Y-NFLIIFSTH-P--------RTKKRLEDLEGFKELGDKIRFLPAFSFTDYVK 278 (385)
T ss_dssp ---CHHHHHHHHHHHHHHHH-------H-CCEEEEEEC-H--------HHHHHHHTSGGGGGTGGGEEECCCCCHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHhc-------C-CeEEEEECC-h--------HHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHH
Confidence 337788999999887651 1 566666443 1 233444443 2 23589988765 47889
Q ss_pred HHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC-cceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHH
Q 023290 167 YLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG-TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRL 245 (284)
Q Consensus 167 ~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~-~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~ 245 (284)
+|+.||+++.+| |....||+++|+|+|+..... ..|.++.| +++++.. | .+++++++..+++|++.++
T Consensus 279 l~~~adlvvt~S-------Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv~~-d--~~~i~~ai~~ll~d~~~~~ 347 (385)
T 4hwg_A 279 LQMNAFCILSDS-------GTITEEASILNLPALNIREAHERPEGMDAG-TLIMSGF-K--AERVLQAVKTITEEHDNNK 347 (385)
T ss_dssp HHHHCSEEEECC-------TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEECCS-S--HHHHHHHHHHHHTTCBTTB
T ss_pred HHHhCcEEEECC-------ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEcCC-C--HHHHHHHHHHHHhChHHHH
Confidence 999999999665 335799999999999976543 45667555 5677654 4 8999999999999987776
Q ss_pred HHHHHHH
Q 023290 246 TMGKRGY 252 (284)
Q Consensus 246 ~~~~~~~ 252 (284)
.|++++.
T Consensus 348 ~m~~~~~ 354 (385)
T 4hwg_A 348 RTQGLVP 354 (385)
T ss_dssp CCSCCCH
T ss_pred HhhccCC
Confidence 6654433
|
| >4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=1.7e-14 Score=123.29 Aligned_cols=157 Identities=11% Similarity=0.119 Sum_probs=105.4
Q ss_pred CCCeEEEEeccccccc----------cHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCC
Q 023290 82 NEDLLFAIINSVSRGK----------GQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKI 151 (284)
Q Consensus 82 ~~~~~i~~~g~~~~~k----------~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~ 151 (284)
+...+++++|++...+ .+..+++++.. .++++++++++. ..+.+. .+
T Consensus 226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~------------~~~~~v~~~~~~-----~~~~l~------~~ 282 (398)
T 4fzr_A 226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPK------------LGFEVVVAVSDK-----LAQTLQ------PL 282 (398)
T ss_dssp SSCEEECC----------------CCSHHHHHHHGGG------------GTCEEEECCCC-------------------C
T ss_pred CCCEEEEEccCcccccccccccchHHHHHHHHHHHHh------------CCCEEEEEeCCc-----chhhhc------cC
Confidence 4556777889986554 34444444432 467888887754 122222 34
Q ss_pred CCcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcC----CCCcceeeecCCceeeecCCCCCh
Q 023290 152 QDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA----AGGTTEIVVNGTTGLLHPVGKEGI 227 (284)
Q Consensus 152 ~~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~----~~~~~e~v~~~~~g~~~~~~d~~~ 227 (284)
+++|.+.++. ++..+|..||++|..+ .+.+++|||++|+|+|+.. ..++.+.+.+...|++++..+.++
T Consensus 283 ~~~v~~~~~~-~~~~ll~~ad~~v~~g------G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~ 355 (398)
T 4fzr_A 283 PEGVLAAGQF-PLSAIMPACDVVVHHG------GHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGV 355 (398)
T ss_dssp CTTEEEESCC-CHHHHGGGCSEEEECC------CHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEECC------
T ss_pred CCcEEEeCcC-CHHHHHhhCCEEEecC------CHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCH
Confidence 6799999998 6899999999999543 3679999999999999954 446667788888999998774348
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 023290 228 TPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIA 269 (284)
Q Consensus 228 ~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (284)
++++++|.++++|++.++++.+.+++.. ...+++.+++.+.
T Consensus 356 ~~l~~ai~~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 396 (398)
T 4fzr_A 356 ESVLAACARIRDDSSYVGNARRLAAEMA-TLPTPADIVRLIE 396 (398)
T ss_dssp -CHHHHHHHHHHCTHHHHHHHHHHHHHT-TSCCHHHHHHHHT
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHH-cCCCHHHHHHHHh
Confidence 9999999999999999999988887755 4588888877664
|
| >3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=5.9e-14 Score=119.67 Aligned_cols=164 Identities=11% Similarity=0.115 Sum_probs=120.0
Q ss_pred CCeEEEEeccccccccH-HHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc
Q 023290 83 EDLLFAIINSVSRGKGQ-DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 161 (284)
Q Consensus 83 ~~~~i~~~g~~~~~k~~-~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~ 161 (284)
+..+++++|+....++. ..+++++.+. . +.++++++++|++.. .+.+. +++++|.+.++.
T Consensus 218 ~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~-------~~p~~~~v~~~~~~~-----~~~l~------~~~~~v~~~~~~ 278 (391)
T 3tsa_A 218 ARRVCICMGRMVLNATGPAPLLRAVAAA-T-------ELPGVEAVIAVPPEH-----RALLT------DLPDNARIAESV 278 (391)
T ss_dssp SEEEEEECCHHHHHHHCSHHHHHHHHHH-H-------TSTTEEEEEECCGGG-----GGGCT------TCCTTEEECCSC
T ss_pred CCEEEEEcCCCCCcccchHHHHHHHHHh-c-------cCCCeEEEEEECCcc-----hhhcc------cCCCCEEEeccC
Confidence 44666777888665544 6666766655 4 337899999887531 11111 346789999987
Q ss_pred cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCC----CCcceeeecCCceeeecC--CCCChHHHHHHHH
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA----GGTTEIVVNGTTGLLHPV--GKEGITPLAKNIV 235 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~----~~~~e~v~~~~~g~~~~~--~d~~~~~~~~~i~ 235 (284)
+...++..||++|..+ .+.+++|||++|+|+|+... ..+.+.+.+...|..+++ .+.+++.++++|.
T Consensus 279 -~~~~ll~~ad~~v~~~------G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~ 351 (391)
T 3tsa_A 279 -PLNLFLRTCELVICAG------GSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIA 351 (391)
T ss_dssp -CGGGTGGGCSEEEECC------CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHH
T ss_pred -CHHHHHhhCCEEEeCC------CHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHH
Confidence 5667889999999543 35689999999999999543 445566778889999987 2223999999999
Q ss_pred HHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 023290 236 KLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 236 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (284)
++++|++.++++.+.+++.. ...+++.+++.+.+++.
T Consensus 352 ~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 352 TVLGDTGFAAAAIKLSDEIT-AMPHPAALVRTLENTAA 388 (391)
T ss_dssp HHHTCTHHHHHHHHHHHHHH-TSCCHHHHHHHHHHC--
T ss_pred HHHcCHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHh
Confidence 99999999999988777654 56888888887766543
|
| >3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=3.1e-13 Score=115.51 Aligned_cols=158 Identities=18% Similarity=0.124 Sum_probs=116.6
Q ss_pred CCeEEEEecccccc-ccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc
Q 023290 83 EDLLFAIINSVSRG-KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 161 (284)
Q Consensus 83 ~~~~i~~~g~~~~~-k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~ 161 (284)
...+++++|++... ++.+.+.+++..+.+ .++++++++++... +.+. +++++|.+.++.
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~---------~~~~~v~~~g~~~~-----~~l~------~~~~~v~~~~~~ 291 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGE---------VDADFVLALGDLDI-----SPLG------TLPRNVRAVGWT 291 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHT---------SSSEEEEECTTSCC-----GGGC------SCCTTEEEESSC
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHc---------CCCEEEEEECCcCh-----hhhc------cCCCcEEEEccC
Confidence 45677788998654 354555444444432 57888888876421 1111 356799999998
Q ss_pred cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEE----cCCCCcc--eeeecCCceeeecCCCCChHHHHHHHH
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLG----TAAGGTT--EIVVNGTTGLLHPVGKEGITPLAKNIV 235 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~----~~~~~~~--e~v~~~~~g~~~~~~d~~~~~~~~~i~ 235 (284)
++..+|..||++|..+ .+.+++|||++|+|+|+ .+...+. +.+.+...|+.++..+.+++.++
T Consensus 292 -~~~~ll~~ad~~v~~~------G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~---- 360 (398)
T 3oti_A 292 -PLHTLLRTCTAVVHHG------GGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR---- 360 (398)
T ss_dssp -CHHHHHTTCSEEEECC------CHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH----
T ss_pred -CHHHHHhhCCEEEECC------CHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----
Confidence 8999999999999543 35799999999999999 5667777 88888889999887643355555
Q ss_pred HHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 023290 236 KLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL 272 (284)
Q Consensus 236 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (284)
++++|++.++++.+.+++.. ...+++.+++.+.+++
T Consensus 361 ~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 361 RLIGDESLRTAAREVREEMV-ALPTPAETVRRIVERI 396 (398)
T ss_dssp HHHHCHHHHHHHHHHHHHHH-TSCCHHHHHHHHHHHH
T ss_pred HHHcCHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHh
Confidence 78899999999988877654 5689998888887764
|
| >2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.45 E-value=1.6e-12 Score=110.51 Aligned_cols=158 Identities=12% Similarity=0.085 Sum_probs=113.8
Q ss_pred CCeEEEEecccccc-------ccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcE
Q 023290 83 EDLLFAIINSVSRG-------KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRV 155 (284)
Q Consensus 83 ~~~~i~~~g~~~~~-------k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v 155 (284)
...+++++|++... +.+..+++++.. .++++++++++. ..+.++ . ++++|
T Consensus 210 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~------------~~~~~~~~~g~~-----~~~~l~----~--~~~~v 266 (384)
T 2p6p_A 210 RQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVR------------WDVELIVAAPDT-----VAEALR----A--EVPQA 266 (384)
T ss_dssp SCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHT------------TTCEEEEECCHH-----HHHHHH----H--HCTTS
T ss_pred CCEEEEECCCCCccccccccHHHHHHHHHHHhc------------CCcEEEEEeCCC-----CHHhhC----C--CCCce
Confidence 45677889998865 456666666543 467888765431 222222 1 34688
Q ss_pred EEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceeeecCCceeeecCCCCChHHHH
Q 023290 156 HFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEGITPLA 231 (284)
Q Consensus 156 ~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v~~~~~g~~~~~~d~~~~~~~ 231 (284)
.+ ++. +...+|..||++|..+ .+++++|||++|+|+|+.+..+ +.+.+.+...|+.++..+.++++++
T Consensus 267 ~~-~~~-~~~~~l~~~d~~v~~~------G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~~~~~~~~~~l~ 338 (384)
T 2p6p_A 267 RV-GWT-PLDVVAPTCDLLVHHA------GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDSTEAIA 338 (384)
T ss_dssp EE-ECC-CHHHHGGGCSEEEECS------CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTCCCHHHHH
T ss_pred EE-cCC-CHHHHHhhCCEEEeCC------cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEecCcCCCCHHHHH
Confidence 99 887 5788999999999754 2468999999999999997643 5556667778998886644489999
Q ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 023290 232 KNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL 272 (284)
Q Consensus 232 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (284)
++|.++++|++.++++.+.+.+.. ..-..+..++.+.+++
T Consensus 339 ~~i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 339 DSCQELQAKDTYARRAQDLSREIS-GMPLPATVVTALEQLA 378 (384)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHH-TSCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHh
Confidence 999999999998888887776544 3456666666555554
|
| >2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.4e-12 Score=97.93 Aligned_cols=133 Identities=6% Similarity=0.037 Sum_probs=96.8
Q ss_pred CCCeEEEEecccc---ccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEe
Q 023290 82 NEDLLFAIINSVS---RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFV 158 (284)
Q Consensus 82 ~~~~~i~~~g~~~---~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~ 158 (284)
+...+++++|++. +.|.+..+++++.. .+.++++++++... ..++++|.+.
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~------------~~~~~~~~~g~~~~--------------~~~~~~v~~~ 73 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQ------------IPQKVLWRFDGNKP--------------DTLGLNTRLY 73 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTT------------SSSEEEEECCSSCC--------------TTCCTTEEEE
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHh------------CCCeEEEEECCcCc--------------ccCCCcEEEe
Confidence 3467788899985 45666666666643 34677777654311 0245689999
Q ss_pred ccccCHHHHH--hhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----CcceeeecCCceeeecCCCCChHHHHH
Q 023290 159 NKTLTVAPYL--AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIVVNGTTGLLHPVGKEGITPLAK 232 (284)
Q Consensus 159 ~~~~~~~~~~--~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~e~v~~~~~g~~~~~~d~~~~~~~~ 232 (284)
++.++ ..++ ..||++|..+ .+++++|||++|+|+|+.+.. .+.+.+.+...|+.++..+.+++++++
T Consensus 74 ~~~~~-~~~l~~~~ad~~I~~~------G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~ 146 (170)
T 2o6l_A 74 KWIPQ-NDLLGHPKTRAFITHG------GANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLN 146 (170)
T ss_dssp SSCCH-HHHHTSTTEEEEEECC------CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHH
T ss_pred cCCCH-HHHhcCCCcCEEEEcC------CccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHH
Confidence 98744 5667 8999999643 258999999999999999764 345566677889998876444899999
Q ss_pred HHHHHhhCHHHHHHH
Q 023290 233 NIVKLATHVERRLTM 247 (284)
Q Consensus 233 ~i~~l~~~~~~~~~~ 247 (284)
+|.+++.|++.++++
T Consensus 147 ~i~~ll~~~~~~~~a 161 (170)
T 2o6l_A 147 ALKRVINDPSYKENV 161 (170)
T ss_dssp HHHHHHHCHHHHHHH
T ss_pred HHHHHHcCHHHHHHH
Confidence 999999998755443
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.3e-11 Score=110.78 Aligned_cols=259 Identities=14% Similarity=0.072 Sum_probs=171.3
Q ss_pred cCCcccccccchhhHHHHHHH-HHHHhcccCCCeEEEecCCccccc----hhhhh-------------------------
Q 023290 14 LPLVAGAMIDSHVTAEYWKNR-TRERLRIKMPDTYVVHLGNSKELM----EVAED------------------------- 63 (284)
Q Consensus 14 ~~~~~~~i~~s~~~~~~~~~~-~~~~~~~~~~~i~vi~~g~~~~~~----~~~~~------------------------- 63 (284)
+..++.+-.+|...++.++.. +...+...+.++.-|-||+++..+ .+..+
T Consensus 400 i~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~ 479 (796)
T 2c4m_A 400 CYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSY 479 (796)
T ss_dssp HHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGG
T ss_pred HHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhh
Confidence 446677777888777776632 122234556789999999998877 22210
Q ss_pred --h--------hHHHHHHHH----HHHHhCC--CCCCeEEEEeccccccccHHH-HHHHHHHHHHHHHhhccCCCCeEEE
Q 023290 64 --N--------VAKRVLREH----VRESLGV--RNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEKKLEVPSVHAV 126 (284)
Q Consensus 64 --~--------~~~~~~~~~----~r~~~~~--~~~~~~i~~~g~~~~~k~~~~-~~~a~~~l~~~~~~~~~~~~~~~l~ 126 (284)
. ..+...+.. +++++|+ +++.+.++++.|+..+|+.++ ++..+.++.+..........+++++
T Consensus 480 ~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~I 559 (796)
T 2c4m_A 480 ADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVI 559 (796)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEE
Confidence 0 112222334 4677776 456799999999999999999 8888887754322111111469999
Q ss_pred EEecCCCCChHHHHH---HHHHHH----HcCCCC--cEEEeccc-cCH-HHHHhhccEEEEcCCCCcCccchhHHHHHhc
Q 023290 127 IIGSDMNAQTKFESE---LRNYVM----QKKIQD--RVHFVNKT-LTV-APYLAAIDVLVQNSQAWGECFGRITIEAMAF 195 (284)
Q Consensus 127 i~G~~~~~~~~~~~~---l~~~~~----~~~~~~--~v~~~~~~-~~~-~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~ 195 (284)
+.|.+.+.....+.- +...++ +..+++ +|.|+... ..+ ..++..||+.++||+...|++|++-+=+|..
T Consensus 560 f~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N 639 (796)
T 2c4m_A 560 FGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN 639 (796)
T ss_dssp EECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT
T ss_pred EEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc
Confidence 999988775433222 222332 124666 78887654 333 4578999999999997789999999999999
Q ss_pred CCCEEEcCCCCcceeeec--CCceeeecCCCCChHHHHHH---HHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 023290 196 QLPVLGTAAGGTTEIVVN--GTTGLLHPVGKEGITPLAKN---IVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAV 270 (284)
Q Consensus 196 G~Pvi~~~~~~~~e~v~~--~~~g~~~~~~d~~~~~~~~~---i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (284)
|.+.|++-.|.+.|+.++ ..||+.+.....++.++... ....-.++ ..+++..++ ....|+|..- ..+.+
T Consensus 640 GaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~y~a~~~y~~~~-~~~~vvd~~---~~g~fs~~~~-~~y~~ 714 (796)
T 2c4m_A 640 GALTLGTMDGANVEIVDSVGEENAYIFGARVEELPALRESYKPYELYETVP-GLKRALDAL---DNGTLNDNNS-GLFYD 714 (796)
T ss_dssp TCEEEEESSTHHHHHHHHHCGGGSEEESCCTTTHHHHHHTCCHHHHHHHST-THHHHHHTT---TSSSSCCTTC-CHHHH
T ss_pred CCeEEeccCCeEeehhhhcCCCcEEEecCchhhHHHHHHhhChHHHhhcCH-HHHHHHHHH---HcCCCCCCCH-HHHHH
Confidence 999999988888877654 46999998743226555542 22222344 233333333 2357888776 67888
Q ss_pred HHHHHHH
Q 023290 271 VLKEVLK 277 (284)
Q Consensus 271 ~~~~~~~ 277 (284)
+|..++.
T Consensus 715 Ly~~L~~ 721 (796)
T 2c4m_A 715 LKHSLIH 721 (796)
T ss_dssp HHHHHHS
T ss_pred HHHHHHh
Confidence 8888874
|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
Probab=99.40 E-value=2.4e-11 Score=109.35 Aligned_cols=257 Identities=13% Similarity=0.071 Sum_probs=169.5
Q ss_pred ccCCcccccccchhhHHHHHHH-HHHHhcccCCCeEEEecCCccccc----hhhhh------------------------
Q 023290 13 HLPLVAGAMIDSHVTAEYWKNR-TRERLRIKMPDTYVVHLGNSKELM----EVAED------------------------ 63 (284)
Q Consensus 13 ~~~~~~~~i~~s~~~~~~~~~~-~~~~~~~~~~~i~vi~~g~~~~~~----~~~~~------------------------ 63 (284)
.+..++.+-.+|...++.++.. +...+...+.++.-+-||+++..+ .+.-+
T Consensus 434 ai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y 513 (824)
T 2gj4_A 434 CIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSY 513 (824)
T ss_dssp HHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGG
T ss_pred HHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhc
Confidence 3556777778888777776532 222334557789999999988877 22111
Q ss_pred ----hh------HHHHHHHH----HHHHhCC--CCCCeEEEEeccccccccHHHH-HHHHHHHHHHHHhhccCCCCeEEE
Q 023290 64 ----NV------AKRVLREH----VRESLGV--RNEDLLFAIINSVSRGKGQDLF-LHSFYESLELIKEKKLEVPSVHAV 126 (284)
Q Consensus 64 ----~~------~~~~~~~~----~r~~~~~--~~~~~~i~~~g~~~~~k~~~~~-~~a~~~l~~~~~~~~~~~~~~~l~ 126 (284)
.. .+...+.. +++.+|+ +++.++++++.|+..+|+.+++ +..+.++.+..........+++++
T Consensus 514 ~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~I 593 (824)
T 2gj4_A 514 VDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVM 593 (824)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEE
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEE
Confidence 01 11222233 5666776 4567999999999999999997 777777653332211011268999
Q ss_pred EEecCCCCChHHHHH---HHHHHHHc----CCCC--cEEEeccc-cCH-HHHHhhccEEEEcCCCCcCccchhHHHHHhc
Q 023290 127 IIGSDMNAQTKFESE---LRNYVMQK----KIQD--RVHFVNKT-LTV-APYLAAIDVLVQNSQAWGECFGRITIEAMAF 195 (284)
Q Consensus 127 i~G~~~~~~~~~~~~---l~~~~~~~----~~~~--~v~~~~~~-~~~-~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~ 195 (284)
+.|.+.+.....+.- +...++.. .+++ +|.|+... ..+ ..++..||+.++||+...|.+|++-+=||..
T Consensus 594 f~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN 673 (824)
T 2gj4_A 594 IGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN 673 (824)
T ss_dssp EECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT
T ss_pred EEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc
Confidence 999988775433222 33333322 2456 78887654 333 4578999999999997789999999999999
Q ss_pred CCCEEEcCCCCcceeee--cCCceeeecCCCCChHHHHHHHH-------HHhhCHHHHHHHHHHHHHHHHHhcCHHHHHH
Q 023290 196 QLPVLGTAAGGTTEIVV--NGTTGLLHPVGKEGITPLAKNIV-------KLATHVERRLTMGKRGYERVKEIFQEHHMAE 266 (284)
Q Consensus 196 G~Pvi~~~~~~~~e~v~--~~~~g~~~~~~d~~~~~~~~~i~-------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (284)
|.+.|++-.|...|+.+ ...||+++... ++++ ..+. .+....+..+++..+. +...|+|..- .
T Consensus 674 GaLtigtlDGanvEi~e~vG~~Ngf~FG~~---~~ev-~~l~~~~~~a~~~Y~~~~~l~~v~d~i---~~g~fs~~~~-~ 745 (824)
T 2gj4_A 674 GALTIGTMDGANVEMAEEAGEENFFIFGMR---VEDV-DRLDQRGYNAQEYYDRIPELRQIIEQL---SSGFFSPKQP-D 745 (824)
T ss_dssp TCEEEECSCTTHHHHHHHHCGGGSEECSCC---HHHH-HHHHHHCCCHHHHHHHCHHHHHHHHHH---HHTTTCTTST-T
T ss_pred CceEEEEecCccchhhhccCCCCEEEeCCc---HHHH-HHHHHcCCCHHHHhcCCHHHHHHHHHH---HhCCCCCCCh-H
Confidence 99999998887777654 35689988765 5555 3332 2333223344444443 3467998776 6
Q ss_pred HHHHHHHHHHH
Q 023290 267 RIAVVLKEVLK 277 (284)
Q Consensus 267 ~~~~~~~~~~~ 277 (284)
.+..+|.+++.
T Consensus 746 ~y~~ly~~l~~ 756 (824)
T 2gj4_A 746 LFKDIVNMLMH 756 (824)
T ss_dssp TTHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 78888887764
|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=2.4e-11 Score=109.02 Aligned_cols=256 Identities=13% Similarity=0.039 Sum_probs=170.6
Q ss_pred cCCcccccccchhhHHHHHHH-HHHHhcccCCCeEEEecCCccccc----hhhh--------------------------
Q 023290 14 LPLVAGAMIDSHVTAEYWKNR-TRERLRIKMPDTYVVHLGNSKELM----EVAE-------------------------- 62 (284)
Q Consensus 14 ~~~~~~~i~~s~~~~~~~~~~-~~~~~~~~~~~i~vi~~g~~~~~~----~~~~-------------------------- 62 (284)
+..++.+-.+|...++.++.. +...+...+.++.-|-||+++..+ .+..
T Consensus 411 i~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~ 490 (796)
T 1l5w_A 411 VVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFA 490 (796)
T ss_dssp HHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGG
T ss_pred HHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcC
Confidence 345666677777777766532 112234556789999999988776 2221
Q ss_pred hh--------hHHHHHHHH----HHHHhCC--CCCCeEEEEeccccccccHHH-HHHHHHHHHHHHHhhccCCCCeEEEE
Q 023290 63 DN--------VAKRVLREH----VRESLGV--RNEDLLFAIINSVSRGKGQDL-FLHSFYESLELIKEKKLEVPSVHAVI 127 (284)
Q Consensus 63 ~~--------~~~~~~~~~----~r~~~~~--~~~~~~i~~~g~~~~~k~~~~-~~~a~~~l~~~~~~~~~~~~~~~l~i 127 (284)
.. ..+...+.. +++++|+ +++.+.++++.|+..+|+.++ ++..+.++.+..........++++++
T Consensus 491 ~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If 570 (796)
T 1l5w_A 491 DDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLF 570 (796)
T ss_dssp GCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEE
Confidence 00 112222334 4677786 456799999999999999999 88888877643322211224699999
Q ss_pred EecCCCCChHHHHH---HHHHHH----HcCCCC--cEEEeccc-cCH-HHHHhhccEEEEcCCCCcCccchhHHHHHhcC
Q 023290 128 IGSDMNAQTKFESE---LRNYVM----QKKIQD--RVHFVNKT-LTV-APYLAAIDVLVQNSQAWGECFGRITIEAMAFQ 196 (284)
Q Consensus 128 ~G~~~~~~~~~~~~---l~~~~~----~~~~~~--~v~~~~~~-~~~-~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G 196 (284)
.|.+.+.....+.- +...++ +..+++ +|.|+... ..+ ..++..||+.++||+...|++|++-+=+|..|
T Consensus 571 ~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NG 650 (796)
T 1l5w_A 571 GAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNG 650 (796)
T ss_dssp ECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTT
T ss_pred EecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcC
Confidence 99988775433222 222332 124566 78887654 333 45789999999999977899999999999999
Q ss_pred CCEEEcCCCCcceeeec--CCceeeecCCCCChHHHHHHHH-------HHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 023290 197 LPVLGTAAGGTTEIVVN--GTTGLLHPVGKEGITPLAKNIV-------KLATHVERRLTMGKRGYERVKEIFQEHHMAER 267 (284)
Q Consensus 197 ~Pvi~~~~~~~~e~v~~--~~~g~~~~~~d~~~~~~~~~i~-------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (284)
.+.|++-.|.+.|+.++ ..||+.+.. + ++++.+.-. ..-.++ ..+++...+. ...|+|..- ..
T Consensus 651 aL~iGtLDGanvEi~e~vG~~NgF~FG~-~--~~ev~~l~~~~y~a~~~y~~~~-~~~~vvd~~~---~g~fs~~~~-~~ 722 (796)
T 1l5w_A 651 ALTVGTLDGANVEIAEKVGEENIFIFGH-T--VEQVKAILAKGYDPVKWRKKDK-VLDAVLKELE---SGKYSDGDK-HA 722 (796)
T ss_dssp CEEEECSCTTHHHHHHHHCGGGSEECSC-C--HHHHHHHHHHCCCHHHHHHHCH-HHHHHHHHHH---HTTTTTTCT-TT
T ss_pred CeeecCcCCeeeehhhccCCCcEEEecC-C--HHHHHHHHHcccCHHHHhhcCH-HHHHHHHHHH---cCCCCCCcH-HH
Confidence 99999988888887654 468999977 3 677663222 222355 3444444443 467998774 66
Q ss_pred HHHHHHHHHH
Q 023290 268 IAVVLKEVLK 277 (284)
Q Consensus 268 ~~~~~~~~~~ 277 (284)
+.++|..++.
T Consensus 723 y~~Ly~~L~~ 732 (796)
T 1l5w_A 723 FDQMLHSIGK 732 (796)
T ss_dssp THHHHHHTST
T ss_pred HHHHHHHHhc
Confidence 8888877653
|
| >3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} | Back alignment and structure |
|---|
Probab=99.38 E-value=3.7e-12 Score=108.73 Aligned_cols=164 Identities=13% Similarity=0.126 Sum_probs=113.1
Q ss_pred CCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEE-EecCCCCChHHHHHHHHHHHHcCCCCcEEEecc
Q 023290 82 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 160 (284)
Q Consensus 82 ~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i-~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~ 160 (284)
+...++++.|+....+. +.+..++..+.. .++++++ +|.+.. .+.+. .++++|.+.++
T Consensus 230 ~~~~v~v~~G~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~g~~~~-----~~~~~------~~~~~v~~~~~ 288 (402)
T 3ia7_A 230 DAPVLLVSLGNQFNEHP-EFFRACAQAFAD---------TPWHVVMAIGGFLD-----PAVLG------PLPPNVEAHQW 288 (402)
T ss_dssp TCCEEEEECCSCSSCCH-HHHHHHHHHHTT---------SSCEEEEECCTTSC-----GGGGC------SCCTTEEEESC
T ss_pred CCCEEEEECCCCCcchH-HHHHHHHHHHhc---------CCcEEEEEeCCcCC-----hhhhC------CCCCcEEEecC
Confidence 34567778898865542 222222222211 3466665 454321 11111 24578999999
Q ss_pred ccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCC-----CCcceeeecCCceeeecCCCCChHHHHHHHH
Q 023290 161 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA-----GGTTEIVVNGTTGLLHPVGKEGITPLAKNIV 235 (284)
Q Consensus 161 ~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~-----~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~ 235 (284)
.++. .+|..||++|..+- ..+++|||++|+|+|+... ..+.+.+.+.+.|..++.++.+++.+++++.
T Consensus 289 ~~~~-~ll~~ad~~v~~~G------~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~ 361 (402)
T 3ia7_A 289 IPFH-SVLAHARACLTHGT------TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASIREAVE 361 (402)
T ss_dssp CCHH-HHHTTEEEEEECCC------HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHH
T ss_pred CCHH-HHHhhCCEEEECCC------HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHH
Confidence 8666 99999999996552 4688999999999996544 3556667778889988876444999999999
Q ss_pred HHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 023290 236 KLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 274 (284)
Q Consensus 236 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (284)
++++|++.++++.+.+.+.. +..+++..++.+.+++.+
T Consensus 362 ~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 362 RLAADSAVRERVRRMQRDIL-SSGGPARAADEVEAYLGR 399 (402)
T ss_dssp HHHHCHHHHHHHHHHHHHHH-TSCHHHHHHHHHHHHHHH
T ss_pred HHHcCHHHHHHHHHHHHHHh-hCChHHHHHHHHHHHHhh
Confidence 99999999888887776644 457878877777776643
|
| >2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.4e-12 Score=111.56 Aligned_cols=159 Identities=11% Similarity=0.022 Sum_probs=113.4
Q ss_pred CCeEEEEecccccc-----ccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEE
Q 023290 83 EDLLFAIINSVSRG-----KGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHF 157 (284)
Q Consensus 83 ~~~~i~~~g~~~~~-----k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~ 157 (284)
...+++++|++... +.+..+++++.. .++++++.+++.. .+.+. +++++|.+
T Consensus 267 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~------------~~~~~v~~~g~~~-----~~~l~------~~~~~v~~ 323 (441)
T 2yjn_A 267 RRRVCLTLGISSRENSIGQVSIEELLGAVGD------------VDAEIIATFDAQQ-----LEGVA------NIPDNVRT 323 (441)
T ss_dssp SCEEEEEC----------CCSTTTTHHHHHT------------SSSEEEECCCTTT-----TSSCS------SCCSSEEE
T ss_pred CCEEEEECCCCcccccChHHHHHHHHHHHHc------------CCCEEEEEECCcc-----hhhhc------cCCCCEEE
Confidence 35677889998753 777777777653 4678887765431 11110 34678999
Q ss_pred eccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceeeecCCceeeecCCCCChHHHHHH
Q 023290 158 VNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEGITPLAKN 233 (284)
Q Consensus 158 ~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v~~~~~g~~~~~~d~~~~~~~~~ 233 (284)
.++.++ ..+|..||++|..+ .+++++|||++|+|+|+....+ +.+.+.+...|+.++..+.++++++++
T Consensus 324 ~~~~~~-~~ll~~ad~~V~~~------G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~ 396 (441)
T 2yjn_A 324 VGFVPM-HALLPTCAATVHHG------GPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRES 396 (441)
T ss_dssp CCSCCH-HHHGGGCSEEEECC------CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHH
T ss_pred ecCCCH-HHHHhhCCEEEECC------CHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccCCHHHHHHH
Confidence 999854 78899999999633 2579999999999999997743 455666777899888764459999999
Q ss_pred HHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 023290 234 IVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL 272 (284)
Q Consensus 234 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (284)
|.++++|++.++++.+.+++.. .....+.+++.+.+++
T Consensus 397 i~~ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~ 434 (441)
T 2yjn_A 397 VKRVLDDPAHRAGAARMRDDML-AEPSPAEVVGICEELA 434 (441)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHH-TSCCHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHH
Confidence 9999999998888887776644 4577777777776655
|
| >3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=1.8e-11 Score=105.11 Aligned_cols=163 Identities=13% Similarity=0.097 Sum_probs=111.1
Q ss_pred CCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEE-EecCCCCChHHHHHHHHHHHHcCCCCcEEEecc
Q 023290 82 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVI-IGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 160 (284)
Q Consensus 82 ~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i-~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~ 160 (284)
+...++++.|+...... .+++.+.+. +. + .++++++ +|.+.. .+.++ .++++|.+.++
T Consensus 246 ~~~~v~v~~Gs~~~~~~--~~~~~~~~a---l~----~-~~~~~v~~~g~~~~-----~~~l~------~~~~~v~~~~~ 304 (415)
T 3rsc_A 246 DLPVVLVSLGTTFNDRP--GFFRDCARA---FD----G-QPWHVVMTLGGQVD-----PAALG------DLPPNVEAHRW 304 (415)
T ss_dssp CCCEEEEECTTTSCCCH--HHHHHHHHH---HT----T-SSCEEEEECTTTSC-----GGGGC------CCCTTEEEESC
T ss_pred CCCEEEEECCCCCCChH--HHHHHHHHH---Hh----c-CCcEEEEEeCCCCC-----hHHhc------CCCCcEEEEec
Confidence 34567778888754432 222222221 11 1 3477777 454321 11111 34678999999
Q ss_pred ccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCC----CCcceeeecCCceeeecCCCCChHHHHHHHHH
Q 023290 161 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA----GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVK 236 (284)
Q Consensus 161 ~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~----~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~ 236 (284)
.+.. .+|..||++|..+- ..+++|||++|+|+|+... ..+.+.+.+...|..++..+.++++++++|.+
T Consensus 305 ~~~~-~ll~~ad~~v~~~G------~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ 377 (415)
T 3rsc_A 305 VPHV-KVLEQATVCVTHGG------MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGA 377 (415)
T ss_dssp CCHH-HHHHHEEEEEESCC------HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHH
T ss_pred CCHH-HHHhhCCEEEECCc------HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHH
Confidence 8655 99999999996542 4689999999999999543 34556666777888887764449999999999
Q ss_pred HhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 023290 237 LATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 237 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (284)
+++|++.++++.+.+.+.. ...+.+.+++.+.+++.
T Consensus 378 ll~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~ 413 (415)
T 3rsc_A 378 VAADPALLARVEAMRGHVR-RAGGAARAADAVEAYLA 413 (415)
T ss_dssp HHTCHHHHHHHHHHHHHHH-HSCHHHHHHHHHHHHHH
T ss_pred HHcCHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHhh
Confidence 9999999888887776644 45777777777777654
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=2.5e-10 Score=104.29 Aligned_cols=185 Identities=12% Similarity=0.143 Sum_probs=143.5
Q ss_pred HHHhCCCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCC-C
Q 023290 75 RESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQ-D 153 (284)
Q Consensus 75 r~~~~~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~-~ 153 (284)
|..+|++++.++++++.++ .|=.+.++++|.++++++ |+-+|++..... .....+++.+++.|+. +
T Consensus 514 R~~~gLp~~~v~f~~fN~~--~Ki~p~~~~~W~~IL~~v-------P~S~L~Ll~~~~----~~~~~l~~~~~~~gi~~~ 580 (723)
T 4gyw_A 514 RSQYGLPEDAIVYCNFNQL--YKIDPSTLQMWANILKRV-------PNSVLWLLRFPA----VGEPNIQQYAQNMGLPQN 580 (723)
T ss_dssp GGGGTCCTTSEEEECCSCG--GGCCHHHHHHHHHHHHHC-------SSEEEEEEETTG----GGHHHHHHHHHHTTCCGG
T ss_pred hhhcCCCCCCEEEEeCCcc--ccCCHHHHHHHHHHHHhC-------CCCeEEEEeCcH----HHHHHHHHHHHhcCCCcC
Confidence 6788999999888777654 577789999999998854 899999887643 2467888899998874 6
Q ss_pred cEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeee-----c-CCceeeecCCCC
Q 023290 154 RVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVV-----N-GTTGLLHPVGKE 225 (284)
Q Consensus 154 ~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~-----~-~~~g~~~~~~d~ 225 (284)
+|.|.+.. ++....|+.+|+++-|.. + +.+++.+||+.||+|||+-.-..+..-+. . |-..+++. +
T Consensus 581 r~~f~~~~~~~~~l~~~~~~Di~LDt~p--~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~--~- 654 (723)
T 4gyw_A 581 RIIFSPVAPKEEHVRRGQLADVCLDTPL--C-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAK--N- 654 (723)
T ss_dssp GEEEEECCCHHHHHHHGGGCSEEECCSS--S-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCS--S-
T ss_pred eEEECCCCCHHHHHHHhCCCeEEeCCCC--c-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccC--C-
Confidence 89999875 567778899999998765 3 45889999999999999976433332211 1 11223332 2
Q ss_pred ChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHhh
Q 023290 226 GITPLAKNIVKLATHVERRLTMGKRGYERVKE--IFQEHHMAERIAVVLKEVLKKS 279 (284)
Q Consensus 226 ~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 279 (284)
.+++.+.-..+..|++.+..+.++-++.... .|+...+++.+++.|+.+....
T Consensus 655 -~~~Y~~~a~~la~d~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r~ 709 (723)
T 4gyw_A 655 -RQEYEDIAVKLGTDLEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEHY 709 (723)
T ss_dssp -HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999998888776654 6899999999999999987654
|
| >2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} | Back alignment and structure |
|---|
Probab=99.16 E-value=3.2e-10 Score=97.61 Aligned_cols=161 Identities=14% Similarity=0.157 Sum_probs=106.0
Q ss_pred CCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEE-EEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc
Q 023290 83 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAV-IIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 161 (284)
Q Consensus 83 ~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~-i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~ 161 (284)
+..++++.|+.. ....+.+.+++..+.. .+++++ ++|.+... +.+ ..++++|.+.++.
T Consensus 255 ~~~v~v~~Gs~~-~~~~~~~~~~~~al~~---------~~~~~~~~~g~~~~~-----~~~------~~~~~~v~~~~~~ 313 (424)
T 2iya_A 255 RPVLLIALGSAF-TDHLDFYRTCLSAVDG---------LDWHVVLSVGRFVDP-----ADL------GEVPPNVEVHQWV 313 (424)
T ss_dssp CCEEEEECCSSS-CCCHHHHHHHHHHHTT---------CSSEEEEECCTTSCG-----GGG------CSCCTTEEEESSC
T ss_pred CCEEEEEcCCCC-cchHHHHHHHHHHHhc---------CCcEEEEEECCcCCh-----HHh------ccCCCCeEEecCC
Confidence 456777888876 3333333333333311 566774 45654311 111 1246789999998
Q ss_pred cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceeeecCCceeeecCCCCChHHHHHHHHHH
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEGITPLAKNIVKL 237 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l 237 (284)
.+. .+|..||++|..+ ..++++||+++|+|+|+....+ +.+.+.+...|+.++..+.++++++++|.++
T Consensus 314 ~~~-~~l~~~d~~v~~~------G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l 386 (424)
T 2iya_A 314 PQL-DILTKASAFITHA------GMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAV 386 (424)
T ss_dssp CHH-HHHTTCSEEEECC------CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHH
T ss_pred CHH-HHHhhCCEEEECC------chhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHH
Confidence 666 8999999998543 2479999999999999987642 3445556678888875533489999999999
Q ss_pred hhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 023290 238 ATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVL 272 (284)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (284)
++|++.++++.+.+.+ +......+..++.+.+++
T Consensus 387 l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~ 420 (424)
T 2iya_A 387 ASDPGVAERLAAVRQE-IREAGGARAAADILEGIL 420 (424)
T ss_dssp HHCHHHHHHHHHHHHH-HHTSCHHHHHHHHHHHHH
T ss_pred HcCHHHHHHHHHHHHH-HHhcCcHHHHHHHHHHHH
Confidence 9999888777766654 333445555555555443
|
| >1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=99.09 E-value=1.5e-09 Score=93.08 Aligned_cols=157 Identities=8% Similarity=0.014 Sum_probs=105.3
Q ss_pred CCeEEEEecccc-ccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEE-ecCCCCChHHHHHHHHHHHHcCCCCcEEEecc
Q 023290 83 EDLLFAIINSVS-RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 160 (284)
Q Consensus 83 ~~~~i~~~g~~~-~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~-G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~ 160 (284)
+..++++.|++. ..+..+.+++++..+ +.+++++ |.+... ...+++++.+.++
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~------------~~~~v~~~g~~~~~-------------~~~~~~~v~~~~~ 292 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH------------GRRVILSRGWADLV-------------LPDDGADCFAIGE 292 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT------------TCCEEECTTCTTCC-------------CSSCGGGEEECSS
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC------------CCeEEEEeCCCccc-------------ccCCCCCEEEeCc
Confidence 356777889884 666677777776542 3455554 654311 0234568999999
Q ss_pred ccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceeeecCCceeeecCCCCChHHHHHHHHH
Q 023290 161 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEGITPLAKNIVK 236 (284)
Q Consensus 161 ~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~ 236 (284)
.++ ..+|..||++|..+ ..++++|||++|+|+|+....+ +.+.+++.+.|+.++..+.+.++++++|.+
T Consensus 293 ~~~-~~~l~~~d~~v~~~------G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ 365 (415)
T 1iir_A 293 VNH-QVLFGRVAAVIHHG------GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALAT 365 (415)
T ss_dssp CCH-HHHGGGSSEEEECC------CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHH
T ss_pred CCh-HHHHhhCCEEEeCC------ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHH
Confidence 854 57899999999643 2479999999999999987654 445566667888887654458999999999
Q ss_pred HhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 023290 237 LATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK 277 (284)
Q Consensus 237 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (284)
+ .|++.++++.+.+.+ +....-.+++.+.+++++.
T Consensus 366 l-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~ 400 (415)
T 1iir_A 366 A-LTPETHARATAVAGT-----IRTDGAAVAARLLLDAVSR 400 (415)
T ss_dssp H-TSHHHHHHHHHHHHH-----SCSCHHHHHHHHHHHHHHT
T ss_pred H-cCHHHHHHHHHHHHH-----HhhcChHHHHHHHHHHHHh
Confidence 9 998777666554443 3334455556666666554
|
| >3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=4e-09 Score=90.19 Aligned_cols=139 Identities=9% Similarity=0.036 Sum_probs=96.2
Q ss_pred CCCeEEEEecccc-ccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEecc
Q 023290 82 NEDLLFAIINSVS-RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 160 (284)
Q Consensus 82 ~~~~~i~~~g~~~-~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~ 160 (284)
+++.++++.|++. ..+....+++++.. .++++++.++..... ..+.++++.+.++
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~------------~~~~vv~~~g~~~~~------------~~~~~~~v~~~~~ 275 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRA------------QGRRVVLSSGWAGLG------------RIDEGDDCLVVGE 275 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHH------------TTCCEEEECTTTTCC------------CSSCCTTEEEESS
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHh------------CCCEEEEEeCCcccc------------cccCCCCEEEecC
Confidence 3456677888887 55556666666654 356666665432110 1234678999998
Q ss_pred ccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCc----ceeeecCCceeeecCCCCChHHHHHHHHH
Q 023290 161 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGT----TEIVVNGTTGLLHPVGKEGITPLAKNIVK 236 (284)
Q Consensus 161 ~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~----~e~v~~~~~g~~~~~~d~~~~~~~~~i~~ 236 (284)
. ....++..||++|..+ ...++.||+++|+|+|+....+- .+.+.+.+.|..++..+.+.+.++++|.+
T Consensus 276 ~-~~~~ll~~~d~~v~~g------G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ 348 (404)
T 3h4t_A 276 V-NHQVLFGRVAAVVHHG------GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALAT 348 (404)
T ss_dssp C-CHHHHGGGSSEEEECC------CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHH
T ss_pred C-CHHHHHhhCcEEEECC------cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHH
Confidence 7 4588999999999544 24689999999999999865442 23455566788877655459999999999
Q ss_pred HhhCHHHHHHHHHHHH
Q 023290 237 LATHVERRLTMGKRGY 252 (284)
Q Consensus 237 l~~~~~~~~~~~~~~~ 252 (284)
+++ ++.++++.+.+.
T Consensus 349 ll~-~~~~~~~~~~~~ 363 (404)
T 3h4t_A 349 ALT-PGIRARAAAVAG 363 (404)
T ss_dssp HTS-HHHHHHHHHHHT
T ss_pred HhC-HHHHHHHHHHHH
Confidence 998 776666554443
|
| >1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 | Back alignment and structure |
|---|
Probab=98.92 E-value=1.3e-08 Score=87.29 Aligned_cols=137 Identities=10% Similarity=0.053 Sum_probs=93.8
Q ss_pred CCeEEEEecccc---ccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEE-ecCCCCChHHHHHHHHHHHHcCCCCcEEEe
Q 023290 83 EDLLFAIINSVS---RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVII-GSDMNAQTKFESELRNYVMQKKIQDRVHFV 158 (284)
Q Consensus 83 ~~~~i~~~g~~~---~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~-G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~ 158 (284)
+..++++.|+.. ..+....+++++.. .+.+++++ |.+... . ..+++++.+.
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~------------~~~~~v~~~g~~~~~-------~------~~~~~~v~~~ 291 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRA------------QGRRVILSRGWTELV-------L------PDDRDDCFAI 291 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHH------------TTCCEEEECTTTTCC-------C------SCCCTTEEEE
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHH------------CCCeEEEEeCCcccc-------c------cCCCCCEEEe
Confidence 345666788874 33444455555543 34556664 654210 0 2356689999
Q ss_pred ccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceeeecCCceeeecCCCCChHHHHHHH
Q 023290 159 NKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEGITPLAKNI 234 (284)
Q Consensus 159 ~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v~~~~~g~~~~~~d~~~~~~~~~i 234 (284)
++.+ ...+|..||++|..+ ..++++||+++|+|+|+....+ +.+.+.+.+.|+.++..+.+.++++++|
T Consensus 292 ~~~~-~~~ll~~~d~~v~~~------G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i 364 (416)
T 1rrv_A 292 DEVN-FQALFRRVAAVIHHG------SAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAAL 364 (416)
T ss_dssp SSCC-HHHHGGGSSEEEECC------CHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHH
T ss_pred ccCC-hHHHhccCCEEEecC------ChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHH
Confidence 9874 778999999999633 2569999999999999976543 3445556678888876444589999999
Q ss_pred HHHhhCHHHHHHHHHHHH
Q 023290 235 VKLATHVERRLTMGKRGY 252 (284)
Q Consensus 235 ~~l~~~~~~~~~~~~~~~ 252 (284)
.++ .|++.++++.+.++
T Consensus 365 ~~l-~~~~~~~~~~~~~~ 381 (416)
T 1rrv_A 365 TTV-LAPETRARAEAVAG 381 (416)
T ss_dssp HHH-TSHHHHHHHHHHTT
T ss_pred HHh-hCHHHHHHHHHHHH
Confidence 999 99887777655443
|
| >4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=1.8e-08 Score=85.80 Aligned_cols=156 Identities=13% Similarity=0.129 Sum_probs=97.3
Q ss_pred CCeEEEEecccccccc-HHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc
Q 023290 83 EDLLFAIINSVSRGKG-QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT 161 (284)
Q Consensus 83 ~~~~i~~~g~~~~~k~-~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~ 161 (284)
...+++..|++...++ ...+.+++..+.. .+..+++.+.+.... ....+++++.+.++.
T Consensus 237 ~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~---------~~~~~v~~~~~~~~~-----------~~~~~~~~v~~~~~~ 296 (400)
T 4amg_A 237 RRRIAVTLGSIDALSGGIAKLAPLFSEVAD---------VDAEFVLTLGGGDLA-----------LLGELPANVRVVEWI 296 (400)
T ss_dssp CCEEEECCCSCC--CCSSSTTHHHHHHGGG---------SSSEEEEECCTTCCC-----------CCCCCCTTEEEECCC
T ss_pred CcEEEEeCCcccccCccHHHHHHHHHHhhc---------cCceEEEEecCcccc-----------ccccCCCCEEEEeec
Confidence 3456667788765443 2333333333322 566777665543211 112456789999887
Q ss_pred cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceeeecCCceeeecCCCCChHHHHHHHHHH
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEGITPLAKNIVKL 237 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l 237 (284)
....+|..||++|..+ ..++++|||++|+|+|+....+ +...+.+.+.|+.++..+ ..+++|.++
T Consensus 297 -p~~~lL~~~~~~v~h~------G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~~----~~~~al~~l 365 (400)
T 4amg_A 297 -PLGALLETCDAIIHHG------GSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEAGS----LGAEQCRRL 365 (400)
T ss_dssp -CHHHHHTTCSEEEECC------CHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCTTT----CSHHHHHHH
T ss_pred -CHHHHhhhhhheeccC------CccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCCCC----chHHHHHHH
Confidence 5778999999998433 3568999999999999865443 444555656777776644 457889999
Q ss_pred hhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 023290 238 ATHVERRLTMGKRGYERVKEIFQEHHMAERIAV 270 (284)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (284)
++|++.+++..+-+.+ +...-+....++.+++
T Consensus 366 L~d~~~r~~a~~l~~~-~~~~~~~~~~a~~le~ 397 (400)
T 4amg_A 366 LDDAGLREAALRVRQE-MSEMPPPAETAAXLVA 397 (400)
T ss_dssp HHCHHHHHHHHHHHHH-HHTSCCHHHHHHHHHH
T ss_pred HcCHHHHHHHHHHHHH-HHcCCCHHHHHHHHHH
Confidence 9999877766554443 4444466665555544
|
| >3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=7e-06 Score=66.12 Aligned_cols=94 Identities=7% Similarity=0.075 Sum_probs=65.0
Q ss_pred eEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCH
Q 023290 85 LLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTV 164 (284)
Q Consensus 85 ~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~ 164 (284)
.+++++|..++..-...+++++... .. -.++.|.+.+ ..+.+++..+.. .++.+.++.+++
T Consensus 159 ~ILv~~GG~d~~~l~~~vl~~L~~~-----------~~-i~vv~G~~~~----~~~~l~~~~~~~---~~v~v~~~~~~m 219 (282)
T 3hbm_A 159 DFFICMGGTDIKNLSLQIASELPKT-----------KI-ISIATSSSNP----NLKKLQKFAKLH---NNIRLFIDHENI 219 (282)
T ss_dssp EEEEECCSCCTTCHHHHHHHHSCTT-----------SC-EEEEECTTCT----THHHHHHHHHTC---SSEEEEESCSCH
T ss_pred eEEEEECCCchhhHHHHHHHHhhcC-----------CC-EEEEECCCch----HHHHHHHHHhhC---CCEEEEeCHHHH
Confidence 4556778766554344444444321 23 3456676543 456666665543 379999999999
Q ss_pred HHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCC
Q 023290 165 APYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA 204 (284)
Q Consensus 165 ~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~ 204 (284)
.++|+.||++|.++ |.++.|++++|+|.|....
T Consensus 220 ~~~m~~aDlvI~~g-------G~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 220 AKLMNESNKLIISA-------SSLVNEALLLKANFKAICY 252 (282)
T ss_dssp HHHHHTEEEEEEES-------SHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHCCEEEECC-------cHHHHHHHHcCCCEEEEeC
Confidence 99999999999732 5799999999999998653
|
| >3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=6.3e-05 Score=69.09 Aligned_cols=224 Identities=10% Similarity=0.091 Sum_probs=120.1
Q ss_pred CCcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecccc
Q 023290 15 PLVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS 94 (284)
Q Consensus 15 ~~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~ 94 (284)
...|.+++.|....+.++ +.++....++.++..+-....+.... ....+..+++++++++++.+|+|+-++.
T Consensus 477 ~~~D~~~~~s~~~~~~~~----~~f~~~~~~i~~~G~PR~D~l~~~~~----~~~~~~~~~~~~~~~~~kk~ILyaPT~r 548 (729)
T 3l7i_A 477 SRWDYLISPNRYSTEIFR----SAFWMDEERILEIGYPRNDVLVNRAN----DQEYLDEIRTHLNLPSDKKVIMYAPTWR 548 (729)
T ss_dssp TTCSEEEESSHHHHHHHH----HHTCCCGGGEEESCCGGGHHHHHSTT----CHHHHHHHHHHTTCCSSCEEEEECCCCC
T ss_pred ccCCEEEeCCHHHHHHHH----HHhCCCcceEEEcCCCchHHHhcccc----hHHHHHHHHHHhCCCCCCeEEEEeeeee
Confidence 346778888887777644 44666655554443332222221111 1122477899999999999999987765
Q ss_pred ccc----c-----HHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHH
Q 023290 95 RGK----G-----QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVA 165 (284)
Q Consensus 95 ~~k----~-----~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~ 165 (284)
... + ...-++.+ .+.+. .++.+++-... . +.......+..+.+.......++.
T Consensus 549 ~~~~~~~~~~~~~~~~~~~~l---~~~l~------~~~~li~r~Hp------~---~~~~~~~~~~~~~~~~~~~~~di~ 610 (729)
T 3l7i_A 549 DDEFVSKGKYLFELKIDLDNL---YKELG------DDYVILLRMHY------L---ISNALDLSGYENFAIDVSNYNDVS 610 (729)
T ss_dssp GGGCCGGGSSCCCCTTCHHHH---HHHHT------TTEEEEECCCH------H---HHTTCCCTTCTTTEEECTTCSCHH
T ss_pred CCccccccccccchhhHHHHH---HHHcC------CCeEEEEecCc------c---hhccccccccCCcEEeCCCCcCHH
Confidence 431 1 11112222 23232 56766665442 1 111111112344565555557999
Q ss_pred HHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCC-------CChHHHHHHHHHHh
Q 023290 166 PYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGK-------EGITPLAKNIVKLA 238 (284)
Q Consensus 166 ~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d-------~~~~~~~~~i~~l~ 238 (284)
++|..||++|.-. +.+++|++.+++|||.... ...++. +...|+.++..+ .+.+++.++|....
T Consensus 611 ~ll~~aD~lITDy-------SSv~fD~~~l~kPiif~~~-D~~~Y~-~~~rg~y~d~~~~~pg~~~~~~~eL~~~i~~~~ 681 (729)
T 3l7i_A 611 ELFLISDCLITDY-------SSVMFDYGILKRPQFFFAY-DIDKYD-KGLRGFYMNYMEDLPGPIYTEPYGLAKELKNLD 681 (729)
T ss_dssp HHHHTCSEEEESS-------CTHHHHHGGGCCCEEEECT-TTTTTT-SSCCSBSSCTTSSSSSCEESSHHHHHHHHTTHH
T ss_pred HHHHHhCEEEeec-------hHHHHhHHhhCCCEEEecC-CHHHHh-hccCCcccChhHhCCCCeECCHHHHHHHHhhhh
Confidence 9999999999543 5699999999999997621 112221 111233322211 13788998888776
Q ss_pred hCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 023290 239 THVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKE 274 (284)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (284)
...+...+..++-++.... |.-...++++.+.+.+
T Consensus 682 ~~~~~~~~~~~~~~~~~~~-~~dg~as~ri~~~i~~ 716 (729)
T 3l7i_A 682 KVQQQYQEKIDAFYDRFCS-VDNGKASQYIGDLIHK 716 (729)
T ss_dssp HHHHHTHHHHHHHHHHHST-TCCSCHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHhCC-ccCChHHHHHHHHHHh
Confidence 5433333322222222221 2333555665555443
|
| >2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=1.6e-05 Score=68.92 Aligned_cols=93 Identities=15% Similarity=0.036 Sum_probs=66.6
Q ss_pred CcEEEeccccCHHHHHh--hccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceeeecC-CceeeecCCCC
Q 023290 153 DRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNG-TTGLLHPVGKE 225 (284)
Q Consensus 153 ~~v~~~~~~~~~~~~~~--~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v~~~-~~g~~~~~~d~ 225 (284)
+++.+.++..+ ..++. .+|++|.-. ..++++||+++|+|+|+-...+ +...+.+. +.|+.++..+.
T Consensus 325 ~~~~v~~w~pq-~~vL~h~~~~~fvth~------G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~ 397 (456)
T 2c1x_A 325 GYGMVVPWAPQ-AEVLAHEAVGAFVTHC------GWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVF 397 (456)
T ss_dssp TTEEEESCCCH-HHHHTSTTEEEEEECC------CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSC
T ss_pred CceEEecCCCH-HHHhcCCcCCEEEecC------CcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCc
Confidence 47888888755 46788 677888422 2569999999999999876532 23344455 67887765444
Q ss_pred ChHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 023290 226 GITPLAKNIVKLATHVERRLTMGKRGYE 253 (284)
Q Consensus 226 ~~~~~~~~i~~l~~~~~~~~~~~~~~~~ 253 (284)
+.++++++|.+++.+++ .+++.+++++
T Consensus 398 ~~~~l~~~i~~ll~~~~-~~~~r~~a~~ 424 (456)
T 2c1x_A 398 TKSGLMSCFDQILSQEK-GKKLRENLRA 424 (456)
T ss_dssp CHHHHHHHHHHHHHSHH-HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCc-HHHHHHHHHH
Confidence 58999999999999875 4455555554
|
| >3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=0.00016 Score=62.36 Aligned_cols=149 Identities=11% Similarity=0.006 Sum_probs=88.3
Q ss_pred CCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHH-HHHHHcCCCCcEEEecc
Q 023290 82 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELR-NYVMQKKIQDRVHFVNK 160 (284)
Q Consensus 82 ~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~-~~~~~~~~~~~v~~~~~ 160 (284)
++..+++..|+.... ..+.+.+.+..+.. .+.+++++-+.. ....+. .+..+ .++++.+.++
T Consensus 272 ~~~vVyvsfGS~~~~-~~~~~~el~~~l~~---------~~~~flw~~~~~-----~~~~lp~~~~~~--~~~~~~vv~w 334 (454)
T 3hbf_A 272 NSSVVYISFGSVVTP-PPHELTALAESLEE---------CGFPFIWSFRGD-----PKEKLPKGFLER--TKTKGKIVAW 334 (454)
T ss_dssp TTCEEEEECCSSCCC-CHHHHHHHHHHHHH---------HCCCEEEECCSC-----HHHHSCTTHHHH--TTTTEEEESS
T ss_pred CCceEEEecCCCCcC-CHHHHHHHHHHHHh---------CCCeEEEEeCCc-----chhcCCHhHHhh--cCCceEEEee
Confidence 345666778887653 23444443333322 344555543322 111111 11111 2357888888
Q ss_pred ccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceeeecC-CceeeecCCCCChHHHHHHHH
Q 023290 161 TLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNG-TTGLLHPVGKEGITPLAKNIV 235 (284)
Q Consensus 161 ~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v~~~-~~g~~~~~~d~~~~~~~~~i~ 235 (284)
..+ ..++.++++.+.-+. .| -++++||+++|+|+|+-...+ +...+.+. +.|+.++.++.+.+++.++|.
T Consensus 335 ~Pq-~~vL~h~~v~~fvtH---~G-~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~ 409 (454)
T 3hbf_A 335 APQ-VEILKHSSVGVFLTH---SG-WNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALE 409 (454)
T ss_dssp CCH-HHHHHSTTEEEEEEC---CC-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHH
T ss_pred CCH-HHHHhhcCcCeEEec---CC-cchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHH
Confidence 754 589999995443343 22 459999999999999876532 23344453 678877765555899999999
Q ss_pred HHhhCHHHHHHHHHHHHH
Q 023290 236 KLATHVERRLTMGKRGYE 253 (284)
Q Consensus 236 ~l~~~~~~~~~~~~~~~~ 253 (284)
+++++++ .+++.+++++
T Consensus 410 ~ll~~~~-~~~~r~~a~~ 426 (454)
T 3hbf_A 410 LTMSSEK-GGIMRQKIVK 426 (454)
T ss_dssp HHHSSHH-HHHHHHHHHH
T ss_pred HHHCCCh-HHHHHHHHHH
Confidence 9998742 3344444443
|
| >2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 | Back alignment and structure |
|---|
Probab=97.99 E-value=0.00025 Score=61.81 Aligned_cols=148 Identities=14% Similarity=0.054 Sum_probs=87.9
Q ss_pred CCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCC--CCh-HHHHHHHHHHHHcCCCCcEEEec
Q 023290 83 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMN--AQT-KFESELRNYVMQKKIQDRVHFVN 159 (284)
Q Consensus 83 ~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~--~~~-~~~~~l~~~~~~~~~~~~v~~~~ 159 (284)
...+++..|++.. .....+.+.+..+.. .+.+++++-+... +.. ...+.+.. +. ++++.+.+
T Consensus 295 ~~vv~vs~GS~~~-~~~~~~~~~~~~l~~---------~~~~~l~~~~~~~~~~~~~~l~~~~~~---~~--~~~~~v~~ 359 (482)
T 2pq6_A 295 GSVVYVNFGSTTV-MTPEQLLEFAWGLAN---------CKKSFLWIIRPDLVIGGSVIFSSEFTN---EI--ADRGLIAS 359 (482)
T ss_dssp TCEEEEECCSSSC-CCHHHHHHHHHHHHH---------TTCEEEEECCGGGSTTTGGGSCHHHHH---HH--TTTEEEES
T ss_pred CceEEEecCCccc-CCHHHHHHHHHHHHh---------cCCcEEEEEcCCccccccccCcHhHHH---hc--CCCEEEEe
Confidence 4566777888653 233444444433322 4566666533210 000 01122221 21 35888889
Q ss_pred cccCHHHHHhhccE--EEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceeee-cCCceeeecCCCCChHHHHH
Q 023290 160 KTLTVAPYLAAIDV--LVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVV-NGTTGLLHPVGKEGITPLAK 232 (284)
Q Consensus 160 ~~~~~~~~~~~ad~--~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v~-~~~~g~~~~~~d~~~~~~~~ 232 (284)
+..+. .+|.++++ +|. . . ..++++||+++|+|+|+-...+ +...+. .-+.|+.++ .+.+.+++.+
T Consensus 360 ~~pq~-~~L~h~~~~~~vt--h---~-G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~~~~~~~l~~ 431 (482)
T 2pq6_A 360 WCPQD-KVLNHPSIGGFLT--H---C-GWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVKREELAK 431 (482)
T ss_dssp CCCHH-HHHTSTTEEEEEE--C---C-CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SSCCHHHHHH
T ss_pred ecCHH-HHhcCCCCCEEEe--c---C-CcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-CCCCHHHHHH
Confidence 87555 68877666 553 2 2 2469999999999999986543 223332 456777776 3445899999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHH
Q 023290 233 NIVKLATHVERRLTMGKRGYER 254 (284)
Q Consensus 233 ~i~~l~~~~~~~~~~~~~~~~~ 254 (284)
+|.+++.+++ .+++.+++++.
T Consensus 432 ~i~~ll~~~~-~~~~r~~a~~l 452 (482)
T 2pq6_A 432 LINEVIAGDK-GKKMKQKAMEL 452 (482)
T ss_dssp HHHHHHTSHH-HHHHHHHHHHH
T ss_pred HHHHHHcCCc-HHHHHHHHHHH
Confidence 9999999886 35555555543
|
| >1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7 | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00023 Score=59.20 Aligned_cols=111 Identities=13% Similarity=0.137 Sum_probs=68.9
Q ss_pred HHHHHHHhCCC-CCCeEEEEecc-ccccccHH--HHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHH
Q 023290 71 REHVRESLGVR-NEDLLFAIINS-VSRGKGQD--LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYV 146 (284)
Q Consensus 71 ~~~~r~~~~~~-~~~~~i~~~g~-~~~~k~~~--~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~ 146 (284)
...+++.+|+. ++.++++..|. ..+.|.+. .+.+++..+.+ .+++++++|+.. ..+..++..
T Consensus 167 ~~~~~~~~~~~~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~---------~~~~vvl~g~~~-----e~~~~~~i~ 232 (348)
T 1psw_A 167 KSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID---------EGYQVVLFGSAK-----DHEAGNEIL 232 (348)
T ss_dssp HHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH---------TTCEEEECCCGG-----GHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcEEEEECCCCccccCCCCHHHHHHHHHHHHH---------CCCeEEEEeChh-----hHHHHHHHH
Confidence 35567778876 34566677777 44556554 66666665543 467888888643 233333333
Q ss_pred HHcCC--CCcE-EEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEc
Q 023290 147 MQKKI--QDRV-HFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT 202 (284)
Q Consensus 147 ~~~~~--~~~v-~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~ 202 (284)
+..+- ..++ .+.|.. .++..+++.||++|.+.. | .+-.|.++|+|+|+-
T Consensus 233 ~~~~~~~~~~~~~l~g~~sl~e~~ali~~a~l~I~~Ds------g-~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 233 AALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDS------G-LMHVAAALNRPLVAL 286 (348)
T ss_dssp TTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESS------H-HHHHHHHTTCCEEEE
T ss_pred HhhhhccccceEeccCcCCHHHHHHHHHhCCEEEecCC------H-HHHHHHHcCCCEEEE
Confidence 32210 1134 455543 688899999999997643 3 333499999999974
|
| >2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=0.0014 Score=56.81 Aligned_cols=80 Identities=21% Similarity=0.127 Sum_probs=57.0
Q ss_pred CcEEEeccccCHHHHHh--hccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----ccee-eecCCceeee-c---
Q 023290 153 DRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEI-VVNGTTGLLH-P--- 221 (284)
Q Consensus 153 ~~v~~~~~~~~~~~~~~--~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~-v~~~~~g~~~-~--- 221 (284)
+++.+.++..+. .+|. .+|++|.-. ..++++||+++|+|+|+-...+ +... ++.-+.|+.+ +
T Consensus 332 ~~~~v~~w~pq~-~vL~h~~~~~fvth~------G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~ 404 (463)
T 2acv_A 332 GKGMICGWAPQV-EVLAHKAIGGFVSHC------GWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYR 404 (463)
T ss_dssp CSEEEESSCCHH-HHHHSTTEEEEEECC------CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCC
T ss_pred CCEEEEccCCHH-HHhCCCccCeEEecC------CchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccC
Confidence 377888887554 5776 677888432 2569999999999999976532 2334 4566678877 2
Q ss_pred CC--CCChHHHHHHHHHHhh
Q 023290 222 VG--KEGITPLAKNIVKLAT 239 (284)
Q Consensus 222 ~~--d~~~~~~~~~i~~l~~ 239 (284)
.+ ..+.+++.++|.++++
T Consensus 405 ~~~~~~~~~~l~~ai~~ll~ 424 (463)
T 2acv_A 405 KGSDVVAAEEIEKGLKDLMD 424 (463)
T ss_dssp TTCCCCCHHHHHHHHHHHTC
T ss_pred CCCccccHHHHHHHHHHHHh
Confidence 23 2348999999999997
|
| >2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.001 Score=57.86 Aligned_cols=80 Identities=11% Similarity=-0.027 Sum_probs=54.7
Q ss_pred EEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceee-ecCCceeeecCC---CCC
Q 023290 155 VHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIV-VNGTTGLLHPVG---KEG 226 (284)
Q Consensus 155 v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v-~~~~~g~~~~~~---d~~ 226 (284)
+.+.++.... .+++++++.+.-+. .| -++++||+++|+|+|+-...+ +...+ +.-+.|+.++.. ..+
T Consensus 341 ~~v~~w~Pq~-~vL~h~~v~~fvtH---gG-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~ 415 (480)
T 2vch_A 341 FVIPFWAPQA-QVLAHPSTGGFLTH---CG-WNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVR 415 (480)
T ss_dssp EEEESCCCHH-HHHHSTTEEEEEEC---CC-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCC
T ss_pred EEEeCccCHH-HHhCCCCcCeEEec---cc-chhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccC
Confidence 3444566444 89999996433332 22 359999999999999976542 23343 455677776543 335
Q ss_pred hHHHHHHHHHHhh
Q 023290 227 ITPLAKNIVKLAT 239 (284)
Q Consensus 227 ~~~~~~~i~~l~~ 239 (284)
.++++++|.+++.
T Consensus 416 ~~~l~~av~~vl~ 428 (480)
T 2vch_A 416 REEVARVVKGLME 428 (480)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 8999999999998
|
| >2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A | Back alignment and structure |
|---|
Probab=97.58 E-value=8.9e-05 Score=57.38 Aligned_cols=73 Identities=7% Similarity=-0.022 Sum_probs=51.8
Q ss_pred cEEEeccccCHHHHHh-hccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCc--------ceeeecCCceeeecCCC
Q 023290 154 RVHFVNKTLTVAPYLA-AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGT--------TEIVVNGTTGLLHPVGK 224 (284)
Q Consensus 154 ~v~~~~~~~~~~~~~~-~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~--------~e~v~~~~~g~~~~~~d 224 (284)
++...++.+++..+|. .||++|.-+ ...+++|++++|+|.|.-..+.. ...+.+...++.+.
T Consensus 115 ~v~v~~f~~~m~~~l~~~AdlvIsha------GagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~~--- 185 (224)
T 2jzc_A 115 KVIGFDFSTKMQSIIRDYSDLVISHA------GTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSCA--- 185 (224)
T ss_dssp EEEECCSSSSHHHHHHHHCSCEEESS------CHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEEC---
T ss_pred eEEEeeccchHHHHHHhcCCEEEECC------cHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEcC---
Confidence 5667788899999999 999999533 35799999999999998765421 22333333455553
Q ss_pred CChHHHHHHHHHH
Q 023290 225 EGITPLAKNIVKL 237 (284)
Q Consensus 225 ~~~~~~~~~i~~l 237 (284)
++.++++|.++
T Consensus 186 --~~~L~~~i~~l 196 (224)
T 2jzc_A 186 --PTETGLIAGLR 196 (224)
T ss_dssp --SCTTTHHHHHH
T ss_pred --HHHHHHHHHHH
Confidence 56677777665
|
| >3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0037 Score=51.96 Aligned_cols=110 Identities=17% Similarity=0.156 Sum_probs=67.7
Q ss_pred HHHHHHhCCCCC-CeEEEEeccccccccH--HHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHH
Q 023290 72 EHVRESLGVRNE-DLLFAIINSVSRGKGQ--DLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQ 148 (284)
Q Consensus 72 ~~~r~~~~~~~~-~~~i~~~g~~~~~k~~--~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~ 148 (284)
..+.++.|+.++ +++++.+|.-.+.|.+ +.+.+.+..+.+ .+.+++++|+.. ..+..++..+.
T Consensus 173 ~~~l~~~g~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~---------~g~~vvl~g~~~-----e~~~~~~i~~~ 238 (349)
T 3tov_A 173 QEFYSSHGLTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGR---------LGYKTVFFGGPM-----DLEMVQPVVEQ 238 (349)
T ss_dssp HHHHHHTTCCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHH---------HTCEEEECCCTT-----THHHHHHHHHT
T ss_pred HHHHHHcCCCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHh---------CCCeEEEEeCcc-----hHHHHHHHHHh
Confidence 334456677644 4566667765555554 455555555543 356778887643 33444455554
Q ss_pred cCCCCcEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcC
Q 023290 149 KKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA 203 (284)
Q Consensus 149 ~~~~~~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~ 203 (284)
.+. ..+.+.|.. .++..+++.||++|.+-. |..-+ |.++|+|+|+--
T Consensus 239 ~~~-~~~~l~g~~sl~e~~ali~~a~~~i~~Ds------G~~Hl-Aaa~g~P~v~lf 287 (349)
T 3tov_A 239 MET-KPIVATGKFQLGPLAAAMNRCNLLITNDS------GPMHV-GISQGVPIVALY 287 (349)
T ss_dssp CSS-CCEECTTCCCHHHHHHHHHTCSEEEEESS------HHHHH-HHTTTCCEEEEC
T ss_pred ccc-ccEEeeCCCCHHHHHHHHHhCCEEEECCC------CHHHH-HHhcCCCEEEEE
Confidence 431 234555543 678899999999997532 33333 999999999853
|
| >2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.016 Score=47.51 Aligned_cols=136 Identities=11% Similarity=0.056 Sum_probs=72.8
Q ss_pred CCCeEEEEeccccccccHH--HHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEec
Q 023290 82 NEDLLFAIINSVSRGKGQD--LFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVN 159 (284)
Q Consensus 82 ~~~~~i~~~g~~~~~k~~~--~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~ 159 (284)
+++.+++..|.-.+.|... .+.+.+..+.+ .++++++.++++ ...+..++..+.. + ++.+.|
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~---------~~~~vvl~~g~~----~e~~~~~~i~~~~--~-~~~l~g 240 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLAD---------SGIRIKLPWGAP----HEEERAKRLAEGF--A-YVEVLP 240 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTT---------TCCEEEECCSSH----HHHHHHHHHHTTC--T-TEEECC
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHH---------CCCcEEEecCCH----HHHHHHHHHHhhC--C-cccccC
Confidence 3456667777665566554 44444444322 467888863332 1223333333322 2 455566
Q ss_pred cc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeec-CCceeeec-----CCCCChHHHH
Q 023290 160 KT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN-GTTGLLHP-----VGKEGITPLA 231 (284)
Q Consensus 160 ~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~-~~~g~~~~-----~~d~~~~~~~ 231 (284)
.. .++..+++.||++|.+-. |..=+ |.|+|+|+|+--.+........ +.....+. -.+.+++++.
T Consensus 241 ~~sl~el~ali~~a~l~I~~DS------G~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~~~cm~~I~~~~V~ 313 (326)
T 2gt1_A 241 KMSLEGVARVLAGAKFVVSVDT------GLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPGNELSQLTANAVK 313 (326)
T ss_dssp CCCHHHHHHHHHTCSEEEEESS------HHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECGGGCGGGCCHHHHH
T ss_pred CCCHHHHHHHHHhCCEEEecCC------cHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCCcccccCCCHHHHH
Confidence 53 688899999999997632 33334 7789999997521111111000 11111111 0112388888
Q ss_pred HHHHHHhhC
Q 023290 232 KNIVKLATH 240 (284)
Q Consensus 232 ~~i~~l~~~ 240 (284)
+++.+++++
T Consensus 314 ~~i~~~l~~ 322 (326)
T 2gt1_A 314 QFIEENAEK 322 (326)
T ss_dssp HHHHHTTTT
T ss_pred HHHHHHHHH
Confidence 888888764
|
| >3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0 | Back alignment and structure |
|---|
Probab=88.75 E-value=4.3 Score=27.86 Aligned_cols=112 Identities=12% Similarity=0.168 Sum_probs=69.5
Q ss_pred CCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHh--hccEEEEcCCCCcCccchhHHHHHhc---
Q 023290 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAF--- 195 (284)
Q Consensus 121 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~--~ad~~~~ps~~~~e~~~~~~~Eama~--- 195 (284)
...+++++.+.. .....+.......+....+.......+....+. ..|++++-... .+.-|..+++.+..
T Consensus 4 ~~~~ILivdd~~----~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l-~~~~g~~~~~~lr~~~~ 78 (144)
T 3kht_A 4 RSKRVLVVEDNP----DDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGL-PIANGFEVMSAVRKPGA 78 (144)
T ss_dssp -CEEEEEECCCH----HHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTC-GGGCHHHHHHHHHSSST
T ss_pred CCCEEEEEeCCH----HHHHHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCC-CCCCHHHHHHHHHhccc
Confidence 456777777643 356677777777765433554444444444443 46888875431 33345666766653
Q ss_pred --CCCEEEcCCCCc----ceeeecCCceeeecCC-CCChHHHHHHHHHHhh
Q 023290 196 --QLPVLGTAAGGT----TEIVVNGTTGLLHPVG-KEGITPLAKNIVKLAT 239 (284)
Q Consensus 196 --G~Pvi~~~~~~~----~e~v~~~~~g~~~~~~-d~~~~~~~~~i~~l~~ 239 (284)
++|+|....... .+.++.|..+++..|. + .+++.++|..+++
T Consensus 79 ~~~~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~--~~~l~~~i~~~l~ 127 (144)
T 3kht_A 79 NQHTPIVILTDNVSDDRAKQCMAAGASSVVDKSSNN--VTDFYGRIYAIFS 127 (144)
T ss_dssp TTTCCEEEEETTCCHHHHHHHHHTTCSEEEECCTTS--HHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCc--HHHHHHHHHHHHH
Confidence 678886433222 2344567889999998 7 9999999988765
|
| >3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=87.20 E-value=5.4 Score=27.25 Aligned_cols=110 Identities=11% Similarity=0.106 Sum_probs=66.4
Q ss_pred eEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHh----hccEEEEcCCCCcCccchhHHHHHh---c
Q 023290 123 VHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA----AIDVLVQNSQAWGECFGRITIEAMA---F 195 (284)
Q Consensus 123 ~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~----~ad~~~~ps~~~~e~~~~~~~Eama---~ 195 (284)
.+++++.+.. .....+.......+. .+.......+....+. ..|++++-... .+.-|..+++.+. -
T Consensus 4 ~~ilivdd~~----~~~~~l~~~l~~~g~--~v~~~~~~~~a~~~~~~~~~~~dlvi~d~~l-~~~~g~~~~~~l~~~~~ 76 (143)
T 3jte_A 4 AKILVIDDES----TILQNIKFLLEIDGN--EVLTASSSTEGLRIFTENCNSIDVVITDMKM-PKLSGMDILREIKKITP 76 (143)
T ss_dssp CEEEEECSCH----HHHHHHHHHHHHTTC--EEEEESSHHHHHHHHHHTTTTCCEEEEESCC-SSSCHHHHHHHHHHHCT
T ss_pred CEEEEEcCCH----HHHHHHHHHHHhCCc--eEEEeCCHHHHHHHHHhCCCCCCEEEEeCCC-CCCcHHHHHHHHHHhCC
Confidence 4566666543 356667777777653 3444443344444444 57888765431 2333455554443 3
Q ss_pred CCCEEEcC-CCC---cceeeecCCceeeecCCCCChHHHHHHHHHHhhCH
Q 023290 196 QLPVLGTA-AGG---TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHV 241 (284)
Q Consensus 196 G~Pvi~~~-~~~---~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~ 241 (284)
.+|+|... ... ..+.++.|..+++..|.+ .+++..+|..++...
T Consensus 77 ~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~--~~~l~~~l~~~~~~~ 124 (143)
T 3jte_A 77 HMAVIILTGHGDLDNAILAMKEGAFEYLRKPVT--AQDLSIAINNAINRK 124 (143)
T ss_dssp TCEEEEEECTTCHHHHHHHHHTTCSEEEESSCC--HHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCHHHHHHHHHhCcceeEeCCCC--HHHHHHHHHHHHHHH
Confidence 67777543 222 234456678899999988 999999999887643
|
| >1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1 | Back alignment and structure |
|---|
Probab=87.11 E-value=5.2 Score=27.00 Aligned_cols=110 Identities=9% Similarity=0.094 Sum_probs=66.7
Q ss_pred eEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHh---------hccEEEEcCCCCcCccchhHHHHH
Q 023290 123 VHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA---------AIDVLVQNSQAWGECFGRITIEAM 193 (284)
Q Consensus 123 ~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~---------~ad~~~~ps~~~~e~~~~~~~Eam 193 (284)
.++.++.+.. .....+.......+....|.......+....+. ..|++++-... .+.-|..+++.+
T Consensus 3 ~~ilivdd~~----~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~-~~~~g~~~~~~l 77 (140)
T 1k68_A 3 KKIFLVEDNK----ADIRLIQEALANSTVPHEVVTVRDGMEAMAYLRQEGEYANASRPDLILLXLNL-PKKDGREVLAEI 77 (140)
T ss_dssp CEEEEECCCH----HHHHHHHHHHHTCSSCCEEEEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSC-SSSCHHHHHHHH
T ss_pred CeEEEEeCCH----HHHHHHHHHHHhcCCCceEEEECCHHHHHHHHHcccccccCCCCcEEEEecCC-CcccHHHHHHHH
Confidence 3566666543 356667777777665334555554455555554 47888875431 223345566555
Q ss_pred h-----cCCCEEEcCCCC----cceeeecCCceeeecCCCCChHHHHHHHHHHhh
Q 023290 194 A-----FQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT 239 (284)
Q Consensus 194 a-----~G~Pvi~~~~~~----~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~ 239 (284)
. ..+|+|...... ..+..+.|..+++..|.+ .+++...|..++.
T Consensus 78 ~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~--~~~l~~~i~~~~~ 130 (140)
T 1k68_A 78 KSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSAN--LSQLFQIVKGIEE 130 (140)
T ss_dssp HHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSS--HHHHHHHHHHHHH
T ss_pred HcCcccccccEEEEecCCcHHHHHHHHHhchhheecCCCC--HHHHHHHHHHHHH
Confidence 4 467877543222 233445577889999888 9999999988764
|
| >3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0 | Back alignment and structure |
|---|
Probab=86.62 E-value=6.2 Score=27.35 Aligned_cols=110 Identities=13% Similarity=0.153 Sum_probs=67.9
Q ss_pred CeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHH-----------hhccEEEEcCCCCcCccchhHH
Q 023290 122 SVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYL-----------AAIDVLVQNSQAWGECFGRITI 190 (284)
Q Consensus 122 ~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~-----------~~ad~~~~ps~~~~e~~~~~~~ 190 (284)
..+++++.+.. .....++......+....|.......+....+ ...|++++-..- .+.-|..++
T Consensus 4 ~~~ILivddd~----~~~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l-~~~~g~~~~ 78 (152)
T 3heb_A 4 SVTIVMIEDDL----GHARLIEKNIRRAGVNNEIIAFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNL-PDMTGIDIL 78 (152)
T ss_dssp -CEEEEECCCH----HHHHHHHHHHHHTTCCCCEEEESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBC-SSSBHHHHH
T ss_pred CceEEEEeCCH----HHHHHHHHHHHhCCCcceEEEeCCHHHHHHHHhccccccccccCCCCEEEEeCCC-CCCcHHHHH
Confidence 35667776543 35677777788777644565555444554554 246888765431 233455666
Q ss_pred HHHhc-----CCCEEEcCCCCc----ceeeecCCceeeecCCCCChHHHHHHHHHHh
Q 023290 191 EAMAF-----QLPVLGTAAGGT----TEIVVNGTTGLLHPVGKEGITPLAKNIVKLA 238 (284)
Q Consensus 191 Eama~-----G~Pvi~~~~~~~----~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~ 238 (284)
+.+.. ++|+|....... .+.++.|..+++..|.+ ++++..+|..+.
T Consensus 79 ~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~KP~~--~~~l~~~i~~~~ 133 (152)
T 3heb_A 79 KLVKENPHTRRSPVVILTTTDDQREIQRCYDLGANVYITKPVN--YENFANAIRQLG 133 (152)
T ss_dssp HHHHHSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSS--HHHHHHHHHHHH
T ss_pred HHHHhcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEeCCCC--HHHHHHHHHHHH
Confidence 66543 677775432222 23445678899999988 999999988773
|
| >2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans} | Back alignment and structure |
|---|
Probab=86.47 E-value=5.4 Score=27.41 Aligned_cols=111 Identities=7% Similarity=0.120 Sum_probs=67.9
Q ss_pred CCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHh--hccEEEEcCCCCcCccchhHHHHHhc---
Q 023290 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAF--- 195 (284)
Q Consensus 121 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~--~ad~~~~ps~~~~e~~~~~~~Eama~--- 195 (284)
...+++++.+... ....+.......|. .|.......+....+. ..|++++-... .+.-|..+++.+..
T Consensus 7 ~~~~iLivd~~~~----~~~~l~~~L~~~g~--~v~~~~~~~~a~~~l~~~~~dlii~d~~l-~~~~g~~~~~~l~~~~~ 79 (147)
T 2zay_A 7 KWWRIMLVDTQLP----ALAASISALSQEGF--DIIQCGNAIEAVPVAVKTHPHLIITEANM-PKISGMDLFNSLKKNPQ 79 (147)
T ss_dssp -CEEEEEECTTGG----GGHHHHHHHHHHTE--EEEEESSHHHHHHHHHHHCCSEEEEESCC-SSSCHHHHHHHHHTSTT
T ss_pred CCceEEEEeCCHH----HHHHHHHHHHHcCC--eEEEeCCHHHHHHHHHcCCCCEEEEcCCC-CCCCHHHHHHHHHcCcc
Confidence 4677788876542 45666666666554 4444443344444443 47888865431 23345666766653
Q ss_pred --CCCEEEc-CCCCc---ceeeecCCceeeecCCCCChHHHHHHHHHHhhC
Q 023290 196 --QLPVLGT-AAGGT---TEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240 (284)
Q Consensus 196 --G~Pvi~~-~~~~~---~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~ 240 (284)
.+|+|.. ..... .+.++.|..+++..+.+ .+++...|..++..
T Consensus 80 ~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kp~~--~~~L~~~i~~~~~~ 128 (147)
T 2zay_A 80 TASIPVIALSGRATAKEEAQLLDMGFIDFIAKPVN--AIRLSARIKRVLKL 128 (147)
T ss_dssp TTTSCEEEEESSCCHHHHHHHHHHTCSEEEESSCC--HHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCCHHHHHHHHhCCCCEEEeCCCC--HHHHHHHHHHHHHH
Confidence 6787754 33221 23345678899999988 99999999888763
|
| >1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A | Back alignment and structure |
|---|
Probab=84.27 E-value=14 Score=30.38 Aligned_cols=72 Identities=13% Similarity=0.074 Sum_probs=46.9
Q ss_pred CCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHh--hccEEEEcCCCCcCccchhHHHHHhcCCC
Q 023290 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLP 198 (284)
Q Consensus 121 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~--~ad~~~~ps~~~~e~~~~~~~Eama~G~P 198 (284)
+++.++.+.+.. .+..+.++++++++..+... .++.+++. .+|+++..+. .....-.+.+|+..|++
T Consensus 29 ~~~~lv~v~d~~------~~~~~~~a~~~~~~~~~~~~---~~~~~ll~~~~~D~V~i~tp--~~~h~~~~~~al~aGk~ 97 (362)
T 1ydw_A 29 PNATISGVASRS------LEKAKAFATANNYPESTKIH---GSYESLLEDPEIDALYVPLP--TSLHVEWAIKAAEKGKH 97 (362)
T ss_dssp TTEEEEEEECSS------HHHHHHHHHHTTCCTTCEEE---SSHHHHHHCTTCCEEEECCC--GGGHHHHHHHHHTTTCE
T ss_pred CCcEEEEEEcCC------HHHHHHHHHHhCCCCCCeee---CCHHHHhcCCCCCEEEEcCC--hHHHHHHHHHHHHCCCe
Confidence 677776555432 34566777777753222222 47777886 5899998776 33334456789999999
Q ss_pred EEEcC
Q 023290 199 VLGTA 203 (284)
Q Consensus 199 vi~~~ 203 (284)
|++-.
T Consensus 98 V~~EK 102 (362)
T 1ydw_A 98 ILLEK 102 (362)
T ss_dssp EEECS
T ss_pred EEEec
Confidence 99853
|
| >1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1 | Back alignment and structure |
|---|
Probab=83.16 E-value=8.8 Score=26.18 Aligned_cols=112 Identities=8% Similarity=0.075 Sum_probs=68.5
Q ss_pred CCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHh------------hccEEEEcCCCCcCccchh
Q 023290 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA------------AIDVLVQNSQAWGECFGRI 188 (284)
Q Consensus 121 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~------------~ad~~~~ps~~~~e~~~~~ 188 (284)
...++.++.+.. .....+.......+....|.......+....+. ..|++++-... .+.-|..
T Consensus 5 ~~~~iLivdd~~----~~~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l-~~~~g~~ 79 (149)
T 1k66_A 5 ATQPLLVVEDSD----EDFSTFQRLLQREGVVNPIYRCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNL-PGTDGRE 79 (149)
T ss_dssp TTSCEEEECCCH----HHHHHHHHHHHHTTBCSCEEEECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCC-SSSCHHH
T ss_pred CCccEEEEECCH----HHHHHHHHHHHHcCCCceEEEECCHHHHHHHHHhcccccCcccCCCCcEEEEECCC-CCCCHHH
Confidence 345667776543 356667777777665334555554445555554 46888865431 2333556
Q ss_pred HHHHHh-----cCCCEEEcCCCC----cceeeecCCceeeecCCCCChHHHHHHHHHHhh
Q 023290 189 TIEAMA-----FQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT 239 (284)
Q Consensus 189 ~~Eama-----~G~Pvi~~~~~~----~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~ 239 (284)
+++.+. ..+|+|...... .....+.|..+++..|.+ .+++...|..++.
T Consensus 80 ~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~kP~~--~~~l~~~i~~~~~ 137 (149)
T 1k66_A 80 VLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIVKPLE--IDRLTETVQTFIK 137 (149)
T ss_dssp HHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSS--HHHHHHHHHHHHH
T ss_pred HHHHHHhCcccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEeCCCC--HHHHHHHHHHHHH
Confidence 666664 457777543222 223445677889999887 9999999988764
|
| >4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=83.12 E-value=7.4 Score=31.76 Aligned_cols=69 Identities=14% Similarity=0.011 Sum_probs=48.5
Q ss_pred CCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhh--ccEEEEcCCCCcCccchhHHHHHhcCCC
Q 023290 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA--IDVLVQNSQAWGECFGRITIEAMAFQLP 198 (284)
Q Consensus 121 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~--ad~~~~ps~~~~e~~~~~~~Eama~G~P 198 (284)
++++++-+.+. ..+..+.++++++++. + ..++.+++.. .|+++..+. ...-.-.+.+|+..|++
T Consensus 47 ~~~~lvav~d~------~~~~a~~~a~~~g~~~-~-----y~d~~ell~~~~iDaV~I~tP--~~~H~~~~~~al~aGkh 112 (350)
T 4had_A 47 ENCVVTAIASR------DLTRAREMADRFSVPH-A-----FGSYEEMLASDVIDAVYIPLP--TSQHIEWSIKAADAGKH 112 (350)
T ss_dssp SSEEEEEEECS------SHHHHHHHHHHHTCSE-E-----ESSHHHHHHCSSCSEEEECSC--GGGHHHHHHHHHHTTCE
T ss_pred CCeEEEEEECC------CHHHHHHHHHHcCCCe-e-----eCCHHHHhcCCCCCEEEEeCC--CchhHHHHHHHHhcCCE
Confidence 78888866654 2466777888887641 1 2578888864 688888776 33333467789999999
Q ss_pred EEEcC
Q 023290 199 VLGTA 203 (284)
Q Consensus 199 vi~~~ 203 (284)
|++-.
T Consensus 113 Vl~EK 117 (350)
T 4had_A 113 VVCEK 117 (350)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 99853
|
| >3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1} | Back alignment and structure |
|---|
Probab=82.12 E-value=9.5 Score=25.85 Aligned_cols=110 Identities=9% Similarity=0.000 Sum_probs=65.8
Q ss_pred CCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHh--hccEEEEcCCCCcCccchhHHHHHhc---
Q 023290 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAF--- 195 (284)
Q Consensus 121 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~--~ad~~~~ps~~~~e~~~~~~~Eama~--- 195 (284)
...+++++.+.. .....+.......+. .|......++....+. ..|++++-... .+.-|..+++.+..
T Consensus 6 ~~~~iLivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~a~~~l~~~~~dlii~d~~l-~~~~g~~~~~~l~~~~~ 78 (142)
T 3cg4_A 6 HKGDVMIVDDDA----HVRIAVKTILSDAGF--HIISADSGGQCIDLLKKGFSGVVLLDIMM-PGMDGWDTIRAILDNSL 78 (142)
T ss_dssp CCCEEEEECSCH----HHHHHHHHHHHHTTC--EEEEESSHHHHHHHHHTCCCEEEEEESCC-SSSCHHHHHHHHHHTTC
T ss_pred CCCeEEEEcCCH----HHHHHHHHHHHHCCe--EEEEeCCHHHHHHHHHhcCCCEEEEeCCC-CCCCHHHHHHHHHhhcc
Confidence 456777776643 356667777777654 3544444344444443 35787765431 23335566666543
Q ss_pred --CCCEEEc-CCC---CcceeeecCCceeeecCCCCChHHHHHHHHHHhh
Q 023290 196 --QLPVLGT-AAG---GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT 239 (284)
Q Consensus 196 --G~Pvi~~-~~~---~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~ 239 (284)
.+|+|.. ... ...+.++.|..+++..+.+ .+++...|..++.
T Consensus 79 ~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~kp~~--~~~l~~~i~~~~~ 126 (142)
T 3cg4_A 79 EQGIAIVMLTAKNAPDAKMIGLQEYVVDYITKPFD--NEDLIEKTTFFMG 126 (142)
T ss_dssp CTTEEEEEEECTTCCCCSSTTGGGGEEEEEESSCC--HHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHhcCccEEEeCCCC--HHHHHHHHHHHHH
Confidence 5677743 222 2233445567788888887 9999999988764
|
| >2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A | Back alignment and structure |
|---|
Probab=82.03 E-value=9.5 Score=25.74 Aligned_cols=107 Identities=10% Similarity=0.091 Sum_probs=60.6
Q ss_pred CCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHh--hccEEEEcCCCCcCccchhHHHHHh--c-
Q 023290 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMA--F- 195 (284)
Q Consensus 121 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~--~ad~~~~ps~~~~e~~~~~~~Eama--~- 195 (284)
...+++++.+.. .....+.......|. .|.......+....+. ..|++++|. .. |..+++.+. .
T Consensus 17 ~~~~ilivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~al~~l~~~~~dlvi~~~---~~--g~~~~~~l~~~~~ 85 (137)
T 2pln_A 17 GSMRVLLIEKNS----VLGGEIEKGLNVKGF--MADVTESLEDGEYLMDIRNYDLVMVSD---KN--ALSFVSRIKEKHS 85 (137)
T ss_dssp TCSEEEEECSCH----HHHHHHHHHHHHTTC--EEEEESCHHHHHHHHHHSCCSEEEECS---TT--HHHHHHHHHHHST
T ss_pred CCCeEEEEeCCH----HHHHHHHHHHHHcCc--EEEEeCCHHHHHHHHHcCCCCEEEEcC---cc--HHHHHHHHHhcCC
Confidence 455666666532 245556666665543 3443333333333333 357877332 22 445554443 3
Q ss_pred CCCEEEcC-CCC---cceeeecCCceeeecCC-CCChHHHHHHHHHHhhC
Q 023290 196 QLPVLGTA-AGG---TTEIVVNGTTGLLHPVG-KEGITPLAKNIVKLATH 240 (284)
Q Consensus 196 G~Pvi~~~-~~~---~~e~v~~~~~g~~~~~~-d~~~~~~~~~i~~l~~~ 240 (284)
.+|+|... ... ....++.|..+++..+. + .+++..+|..++..
T Consensus 86 ~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~--~~~l~~~i~~~~~~ 133 (137)
T 2pln_A 86 SIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRS--IKALVARIEARLRF 133 (137)
T ss_dssp TSEEEEEESSCCHHHHHHHHHTTCSEEEESSCSC--HHHHHHHHHHHTC-
T ss_pred CccEEEEeCCCCHHHHHHHHHcCCceeeeCCCCC--HHHHHHHHHHHHhh
Confidence 67777543 222 23344567788999987 8 99999999888753
|
| >3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=81.97 E-value=9.8 Score=25.86 Aligned_cols=115 Identities=8% Similarity=-0.053 Sum_probs=67.4
Q ss_pred CCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhh-------ccEEEEcCCCCcCccchhHHHHH
Q 023290 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAA-------IDVLVQNSQAWGECFGRITIEAM 193 (284)
Q Consensus 121 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~-------ad~~~~ps~~~~e~~~~~~~Eam 193 (284)
...+++++.+.. .....+.......+....|.......+....+.. .|++++-..- .+.-|..+++.+
T Consensus 8 ~~~~iLivdd~~----~~~~~l~~~l~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l-~~~~g~~~~~~l 82 (146)
T 3ilh_A 8 KIDSVLLIDDDD----IVNFLNTTIIRMTHRVEEIQSVTSGNAAINKLNELYAAGRWPSIICIDINM-PGINGWELIDLF 82 (146)
T ss_dssp CEEEEEEECSCH----HHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSC-SSSCHHHHHHHH
T ss_pred ccceEEEEeCCH----HHHHHHHHHHHhcCCCeeeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCC-CCCCHHHHHHHH
Confidence 445677776643 2456666667665542234444444455555544 7888875431 333455566554
Q ss_pred h-------cCCCEEEcCCCCc----ceeeecC-CceeeecCCCCChHHHHHHHHHHhhCHH
Q 023290 194 A-------FQLPVLGTAAGGT----TEIVVNG-TTGLLHPVGKEGITPLAKNIVKLATHVE 242 (284)
Q Consensus 194 a-------~G~Pvi~~~~~~~----~e~v~~~-~~g~~~~~~d~~~~~~~~~i~~l~~~~~ 242 (284)
. ...|+|....... ......+ ..+++..|-+ .+++..+|........
T Consensus 83 ~~~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~~l~KP~~--~~~L~~~i~~~~~~~~ 141 (146)
T 3ilh_A 83 KQHFQPMKNKSIVCLLSSSLDPRDQAKAEASDWVDYYVSKPLT--ANALNNLYNKVLNEGH 141 (146)
T ss_dssp HHHCGGGTTTCEEEEECSSCCHHHHHHHHHCSSCCEEECSSCC--HHHHHHHHHHHHCC--
T ss_pred HHhhhhccCCCeEEEEeCCCChHHHHHHHhcCCcceeeeCCCC--HHHHHHHHHHHHHhcc
Confidence 3 3677775433322 2233445 7789999988 9999999998877543
|
| >1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A | Back alignment and structure |
|---|
Probab=81.92 E-value=7.7 Score=29.70 Aligned_cols=81 Identities=6% Similarity=0.015 Sum_probs=50.1
Q ss_pred CCeEEEEEecCC--CCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhccEEEEcCCC-------C-cCccchhHH
Q 023290 121 PSVHAVIIGSDM--NAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQA-------W-GECFGRITI 190 (284)
Q Consensus 121 ~~~~l~i~G~~~--~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad~~~~ps~~-------~-~e~~~~~~~ 190 (284)
...++.++..+. .+...+...+.+..+++|. .+..+...++..+.+..||.+++|.-. + ..++--.+-
T Consensus 30 ~~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~--~~~~v~~~~d~~~~l~~ad~I~lpGG~~~~~~~~l~~~gl~~~l~ 107 (229)
T 1fy2_A 30 GRRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGV--NVTGIHRVADPLAAIEKAEIIIVGGGNTFQLLKESRERGLLAPMA 107 (229)
T ss_dssp TCCEEEEECTTCCSSCHHHHHHHHHHHHGGGTC--EEEETTSSSCHHHHHHHCSEEEECCSCHHHHHHHHHHTTCHHHHH
T ss_pred CCCeEEEEECCCCCCCHHHHHHHHHHHHHHCCC--EEEEEeccccHHHHHhcCCEEEECCCcHHHHHHHHHHCChHHHHH
Confidence 345677776542 2222356666777777775 454444335666889999999998621 0 011223455
Q ss_pred HHHhcCCCEEEcC
Q 023290 191 EAMAFQLPVLGTA 203 (284)
Q Consensus 191 Eama~G~Pvi~~~ 203 (284)
|+...|+|++.+.
T Consensus 108 ~~~~~G~p~~G~s 120 (229)
T 1fy2_A 108 DRVKRGALYIGWS 120 (229)
T ss_dssp HHHHTTCEEEEET
T ss_pred HHHHcCCEEEEEC
Confidence 7778899999874
|
| >3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901} | Back alignment and structure |
|---|
Probab=81.67 E-value=10 Score=25.80 Aligned_cols=111 Identities=14% Similarity=0.066 Sum_probs=66.4
Q ss_pred CCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHh---hccEEEEcCCCCcC-ccchhHHHHHh--
Q 023290 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA---AIDVLVQNSQAWGE-CFGRITIEAMA-- 194 (284)
Q Consensus 121 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~---~ad~~~~ps~~~~e-~~~~~~~Eama-- 194 (284)
...++.++.+.. .....+.......|. .|.......+....+. ..|++++-..- .+ .-|..+++.+.
T Consensus 4 ~~~~ilivdd~~----~~~~~l~~~L~~~g~--~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l-~~~~~g~~~~~~l~~~ 76 (140)
T 3h5i_A 4 KDKKILIVEDSK----FQAKTIANILNKYGY--TVEIALTGEAAVEKVSGGWYPDLILMDIEL-GEGMDGVQTALAIQQI 76 (140)
T ss_dssp --CEEEEECSCH----HHHHHHHHHHHHTTC--EEEEESSHHHHHHHHHTTCCCSEEEEESSC-SSSCCHHHHHHHHHHH
T ss_pred CCcEEEEEeCCH----HHHHHHHHHHHHcCC--EEEEecChHHHHHHHhcCCCCCEEEEeccC-CCCCCHHHHHHHHHhC
Confidence 345677776643 356677777777664 3444433344444443 46888875441 22 33455555443
Q ss_pred cCCCEEEcCC-C---CcceeeecCCceeeecCCCCChHHHHHHHHHHhhC
Q 023290 195 FQLPVLGTAA-G---GTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240 (284)
Q Consensus 195 ~G~Pvi~~~~-~---~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~ 240 (284)
-.+|+|.... . ...+....|..+++..|.+ ++++..+|..++..
T Consensus 77 ~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~--~~~l~~~i~~~l~~ 124 (140)
T 3h5i_A 77 SELPVVFLTAHTEPAVVEKIRSVTAYGYVMKSAT--EQVLITIVEMALRL 124 (140)
T ss_dssp CCCCEEEEESSSSCCCCGGGGGSCEEEEEETTCC--HHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHhCCCcEEEeCCCC--HHHHHHHHHHHHHH
Confidence 4788875422 2 2234455577889999988 99999999888753
|
| >3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=81.30 E-value=18 Score=29.28 Aligned_cols=69 Identities=13% Similarity=0.008 Sum_probs=46.2
Q ss_pred CCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHh--hccEEEEcCCCCcCccchhHHHHHhcCCC
Q 023290 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLP 198 (284)
Q Consensus 121 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~--~ad~~~~ps~~~~e~~~~~~~Eama~G~P 198 (284)
+++.++-+-+.. .+..+..+++++++. ...++.+++. .+|+++..+. ...-.-.+.+|+..|++
T Consensus 28 ~~~~l~av~d~~------~~~~~~~~~~~~~~~------~~~~~~~ll~~~~~D~V~i~tp--~~~h~~~~~~al~~gk~ 93 (330)
T 3e9m_A 28 AQAEVRGIASRR------LENAQKMAKELAIPV------AYGSYEELCKDETIDIIYIPTY--NQGHYSAAKLALSQGKP 93 (330)
T ss_dssp SSEEEEEEBCSS------SHHHHHHHHHTTCCC------CBSSHHHHHHCTTCSEEEECCC--GGGHHHHHHHHHHTTCC
T ss_pred CCcEEEEEEeCC------HHHHHHHHHHcCCCc------eeCCHHHHhcCCCCCEEEEcCC--CHHHHHHHHHHHHCCCe
Confidence 677777554432 245666777776531 2368888887 7899988776 33333456789999999
Q ss_pred EEEcC
Q 023290 199 VLGTA 203 (284)
Q Consensus 199 vi~~~ 203 (284)
|++-.
T Consensus 94 vl~EK 98 (330)
T 3e9m_A 94 VLLEK 98 (330)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 99854
|
| >1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1 | Back alignment and structure |
|---|
Probab=81.30 E-value=1.7 Score=32.54 Aligned_cols=66 Identities=21% Similarity=0.194 Sum_probs=38.8
Q ss_pred HHHhhccEEEEcCCCCcCccch--hHHHHHhcCCCEEEcCCCC-cce----------eeecCCceeeecCCCCChHHHHH
Q 023290 166 PYLAAIDVLVQNSQAWGECFGR--ITIEAMAFQLPVLGTAAGG-TTE----------IVVNGTTGLLHPVGKEGITPLAK 232 (284)
Q Consensus 166 ~~~~~ad~~~~ps~~~~e~~~~--~~~Eama~G~Pvi~~~~~~-~~e----------~v~~~~~g~~~~~~d~~~~~~~~ 232 (284)
-+...||++|... .++|. .+.||+..|+||++-+..+ ... ++.......+.-.+| ++++.+
T Consensus 114 ~m~~~sda~Ivlp----GG~GTL~E~~eal~~~kPV~lln~~g~w~~~l~~~~~~G~fi~~~~~~~i~~~~~--~ee~~~ 187 (195)
T 1rcu_A 114 VLLRNADVVVSIG----GEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAWT--VEEAVQ 187 (195)
T ss_dssp HHHTTCSEEEEES----CCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSCEEEESS--HHHHHH
T ss_pred HHHHhCCEEEEec----CCCcHHHHHHHHHhcCCCEEEECCCCccHHHHHHHHHcCCcCCHHHcCeEEEeCC--HHHHHH
Confidence 4567899987543 23442 5779999999999986433 222 222222222333333 888887
Q ss_pred HHHHH
Q 023290 233 NIVKL 237 (284)
Q Consensus 233 ~i~~l 237 (284)
.|.++
T Consensus 188 ~l~~~ 192 (195)
T 1rcu_A 188 IIEQI 192 (195)
T ss_dssp HHHTC
T ss_pred HHHHH
Confidence 77654
|
| >3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi} | Back alignment and structure |
|---|
Probab=81.13 E-value=12 Score=26.16 Aligned_cols=67 Identities=10% Similarity=0.144 Sum_probs=41.6
Q ss_pred hccEEEEcCCCCcCccchhHHHHH---hcCCCEEEcCCCC----cceeeecCCceeeecCCCCChHHHHHHHHHHhh
Q 023290 170 AIDVLVQNSQAWGECFGRITIEAM---AFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT 239 (284)
Q Consensus 170 ~ad~~~~ps~~~~e~~~~~~~Eam---a~G~Pvi~~~~~~----~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~ 239 (284)
..|++++-... .+.-|..+++.+ ...+|||...... ..+.++.|..+++..+.+ .+++.++|..++.
T Consensus 83 ~~dliilD~~l-~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~--~~~l~~~i~~~l~ 156 (157)
T 3hzh_A 83 NIDIVTLXITM-PKMDGITCLSNIMEFDKNARVIMISALGKEQLVKDCLIKGAKTFIVKPLD--RAKVLQRVMSVFV 156 (157)
T ss_dssp GCCEEEECSSC-SSSCHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHTTCSEEEESSCC--HHHHHHHHHHTTC
T ss_pred CCCEEEEeccC-CCccHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHHcCCCEEEeCCCC--HHHHHHHHHHHhc
Confidence 34777765431 223344555444 3467887543322 223445678889999988 9999999988764
|
| >4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=81.09 E-value=5.6 Score=32.93 Aligned_cols=100 Identities=13% Similarity=0.110 Sum_probs=59.7
Q ss_pred CCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEecccc
Q 023290 83 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTL 162 (284)
Q Consensus 83 ~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~ 162 (284)
+++.|+.+|--.-.+.+ ++++..+...+. ..++++++-+-+.. .+..+..+++++++. + ..
T Consensus 24 kkirvgiIG~G~ig~~H---~~a~~~~~~~~~----~~~~~~lvav~d~~------~~~a~~~a~~~g~~~-~-----y~ 84 (393)
T 4fb5_A 24 KPLGIGLIGTGYMGKCH---ALAWNAVKTVFG----DVERPRLVHLAEAN------AGLAEARAGEFGFEK-A-----TA 84 (393)
T ss_dssp CCCEEEEECCSHHHHHH---HHHHTTHHHHHC----SSCCCEEEEEECC--------TTHHHHHHHHTCSE-E-----ES
T ss_pred CCccEEEEcCCHHHHHH---HHHHHhhhhhhc----cCCCcEEEEEECCC------HHHHHHHHHHhCCCe-e-----cC
Confidence 45677777743222322 334433332222 23677887666643 345667777777641 1 25
Q ss_pred CHHHHHh--hccEEEEcCCCCcCccchhHHHHHhcCCCEEEcC
Q 023290 163 TVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA 203 (284)
Q Consensus 163 ~~~~~~~--~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~ 203 (284)
++.+++. ..|+++..+. ...-.-.+.+|+..|++|++-.
T Consensus 85 d~~ell~~~~iDaV~IatP--~~~H~~~a~~al~aGkhVl~EK 125 (393)
T 4fb5_A 85 DWRALIADPEVDVVSVTTP--NQFHAEMAIAALEAGKHVWCEK 125 (393)
T ss_dssp CHHHHHHCTTCCEEEECSC--GGGHHHHHHHHHHTTCEEEECS
T ss_pred CHHHHhcCCCCcEEEECCC--hHHHHHHHHHHHhcCCeEEEcc
Confidence 7888886 4688887776 3333446788999999999864
|
| >3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=80.73 E-value=9.2 Score=25.94 Aligned_cols=111 Identities=8% Similarity=-0.001 Sum_probs=66.9
Q ss_pred CeEEEEEecCCCCChHHHHHHHHHHHH-cCCCCcEEEeccccCHHHHHh---hccEEEEcCCCCc-CccchhHHHHHh--
Q 023290 122 SVHAVIIGSDMNAQTKFESELRNYVMQ-KKIQDRVHFVNKTLTVAPYLA---AIDVLVQNSQAWG-ECFGRITIEAMA-- 194 (284)
Q Consensus 122 ~~~l~i~G~~~~~~~~~~~~l~~~~~~-~~~~~~v~~~~~~~~~~~~~~---~ad~~~~ps~~~~-e~~~~~~~Eama-- 194 (284)
..+++++.+.. .....++..... .+. .|.......+....+. ..|++++-... . +.-|..+++.+.
T Consensus 4 ~~~ilivdd~~----~~~~~l~~~L~~~~~~--~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l-~~~~~g~~~~~~l~~~ 76 (140)
T 3lua_A 4 DGTVLLIDYFE----YEREKTKIIFDNIGEY--DFIEVENLKKFYSIFKDLDSITLIIMDIAF-PVEKEGLEVLSAIRNN 76 (140)
T ss_dssp CCEEEEECSCH----HHHHHHHHHHHHHCCC--EEEEECSHHHHHTTTTTCCCCSEEEECSCS-SSHHHHHHHHHHHHHS
T ss_pred CCeEEEEeCCH----HHHHHHHHHHHhccCc--cEEEECCHHHHHHHHhcCCCCcEEEEeCCC-CCCCcHHHHHHHHHhC
Confidence 45667776543 255667777776 554 3444333334444443 47888876541 2 223455555543
Q ss_pred ---cCCCEEEcCCCC----cceeeecCCceeeecCCCCChHHHHHHHHHHhhCH
Q 023290 195 ---FQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHV 241 (284)
Q Consensus 195 ---~G~Pvi~~~~~~----~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~ 241 (284)
..+|+|...... ..+.++.|..+++..|.+ .+++..+|..++...
T Consensus 77 ~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~--~~~l~~~i~~~~~~~ 128 (140)
T 3lua_A 77 SRTANTPVIIATKSDNPGYRHAALKFKVSDYILKPYP--TKRLENSVRSVLKIC 128 (140)
T ss_dssp GGGTTCCEEEEESCCCHHHHHHHHHSCCSEEEESSCC--TTHHHHHHHHHHCC-
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCC--HHHHHHHHHHHHHhc
Confidence 478888543322 223445678899999988 899999999988754
|
| >1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A* | Back alignment and structure |
|---|
Probab=80.19 E-value=9.3 Score=29.27 Aligned_cols=86 Identities=10% Similarity=0.050 Sum_probs=50.6
Q ss_pred CCCCeEEEEEecCCCCChHHHHHHHHHH----HHcCCCCcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHH-
Q 023290 119 EVPSVHAVIIGSDMNAQTKFESELRNYV----MQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAM- 193 (284)
Q Consensus 119 ~~~~~~l~i~G~~~~~~~~~~~~l~~~~----~~~~~~~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eam- 193 (284)
.++++.+.++|.|..-.++..+...... +++ ..|++|+-|.+..-..|...=|.+
T Consensus 29 dRedI~vrv~gsGaKm~pe~~~~~~~~~~~~~~~~--------------------~pDfvI~isPN~a~PGP~~ARE~l~ 88 (283)
T 1qv9_A 29 DREDVEFRVVGTSVKMDPECVEAAVEMALDIAEDF--------------------EPDFIVYGGPNPAAPGPSKAREMLA 88 (283)
T ss_dssp CCSSEEEEEEECTTCCSHHHHHHHHHHHHHHHHHH--------------------CCSEEEEECSCTTSHHHHHHHHHHH
T ss_pred ccCCceEEEeccCCCCCHHHHHHHHHHhhhhhhhc--------------------CCCEEEEECCCCCCCCchHHHHHHH
Confidence 5589999999998755444333322222 222 345555544421344456677877
Q ss_pred hcCCCEEE-cCCCCc--ceeeecCCceeeecCCC
Q 023290 194 AFQLPVLG-TAAGGT--TEIVVNGTTGLLHPVGK 224 (284)
Q Consensus 194 a~G~Pvi~-~~~~~~--~e~v~~~~~g~~~~~~d 224 (284)
+.|+|+|+ +|.++. .+-+++..-|+++-..|
T Consensus 89 ~~~iP~IvI~D~p~~K~kd~l~~~g~GYIivk~D 122 (283)
T 1qv9_A 89 DSEYPAVIIGDAPGLKVKDEMEEQGLGYILVKPD 122 (283)
T ss_dssp TSSSCEEEEEEGGGGGGHHHHHHTTCEEEEETTS
T ss_pred hCCCCEEEEcCCcchhhHHHHHhcCCcEEEEecC
Confidence 57999884 555543 34445566787766654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 284 | ||||
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 6e-13 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 2e-12 | |
| d2iw1a1 | 370 | c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt | 6e-07 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 1e-05 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 66.2 bits (160), Expect = 6e-13
Identities = 31/218 (14%), Positives = 67/218 (30%), Gaps = 22/218 (10%)
Query: 67 KRVLREHVRESLGVRNED-LLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHA 125
+ + ++ V E + ++ LF +I+ ++ KG DL + E + L
Sbjct: 273 RALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL---------GGRL 323
Query: 126 VIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECF 185
V++G+ E L + + V A D + E
Sbjct: 324 VVLGAGD---VALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDA--IIIPSRFEPC 378
Query: 186 GRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGIT-------PLAKNIVKLA 238
G + A+ + + GG + V++ L G+ L + I +
Sbjct: 379 GLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTV 438
Query: 239 THVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVL 276
+ + +K A A + +++
Sbjct: 439 RYYHDPKLWTQMQKLGMKSDVSWEKSAGLYAALYSQLI 476
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 64.5 bits (155), Expect = 2e-12
Identities = 43/256 (16%), Positives = 78/256 (30%), Gaps = 15/256 (5%)
Query: 25 HVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNED 84
+ + R V G + ++ ++ + G+
Sbjct: 191 TTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGV 250
Query: 85 LLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRN 144
I KG D+ L + I K E + +IIG + R+
Sbjct: 251 TFMFIGRFDRGQKGVDVLLKAIE-----ILSSKKEFQEMRFIIIGKGDPELEGW---ARS 302
Query: 145 YVMQKKIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA 204
+ + + V ++D ++ S FG + +EAM + +A
Sbjct: 303 LEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFE--PFGLVALEAMCLGAIPIASAV 360
Query: 205 GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVK-LATHVERRLTMGKRGYERVKEIFQEHH 263
GG +I+ N TG+L G LA I+K L + +R F
Sbjct: 361 GGLRDIITNE-TGILVKAGD--PGELANAILKALELSRSDLSKFRENCKKRAMS-FSWEK 416
Query: 264 MAERIAVVLKEVLKKS 279
AER + ++
Sbjct: 417 SAERYVKAYTGSIDRA 432
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Score = 47.6 bits (111), Expect = 6e-07
Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 2/92 (2%)
Query: 181 WGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240
+ E G + +EA+ LPVL TA G + + G + L + + K T
Sbjct: 278 YQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFS-QEQLNEVLRKALTQ 336
Query: 241 VERRLTMGKRGYERVKEIFQEHHMAERIAVVL 272
R+ + + + E+ A ++
Sbjct: 337 SPLRMAWAENARHYADT-QDLYSLPEKAADII 367
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 43.7 bits (102), Expect = 1e-05
Identities = 32/248 (12%), Positives = 72/248 (29%), Gaps = 30/248 (12%)
Query: 45 DTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRG---KGQDL 101
T V +G + + L + E V+ I SV R KG
Sbjct: 219 RTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELKNVQ-------NIFSVERLDYSKGLPE 271
Query: 102 FLHSFYESLELIKEKKLEVPSV-HAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK 160
++ LE + ++ A D+ A +L N + +
Sbjct: 272 RFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTP 331
Query: 161 TLTVAPYLAAIDVLVQNSQAWG-------ECFGRITIEAMAFQLP-----VLGTAAGGTT 208
+ + ++ + + + E +A Q P ++ + G
Sbjct: 332 LYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAA 391
Query: 209 EIVVNGTTGLLHPVGKEGITPLAKNIVKLATH-VERRLTMGKRGYERVKEIFQEHHMAER 267
+ + L+ +A + + T + R++ + + + +H E
Sbjct: 392 NELTSA---LIVNPYD--RDEVAAALDRALTMSLAERISRHAEMLDVIVK-NDINHWQEC 445
Query: 268 IAVVLKEV 275
LK++
Sbjct: 446 FISDLKQI 453
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 284 | |||
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.97 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.94 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 99.93 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 98.83 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 98.81 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 98.76 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 98.61 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 98.6 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 98.54 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.39 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 97.89 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 97.86 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 97.78 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 97.73 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 97.67 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 97.45 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 97.2 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 96.82 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 88.95 | |
| d1t9ba1 | 171 | Acetohydroxyacid synthase catalytic subunit {Baker | 86.7 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 85.26 | |
| d2nzwa1 | 349 | Alpha1,3-fucosyltransferase FucT {Helicobacter pyl | 81.11 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 80.58 |
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.2e-35 Score=249.40 Aligned_cols=233 Identities=16% Similarity=0.159 Sum_probs=194.8
Q ss_pred CcccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccccc
Q 023290 16 LVAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSR 95 (284)
Q Consensus 16 ~~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~~ 95 (284)
..+.+++.+....+. +.+.++.+.+++.+++||++++.+.+...+. .+...|..++++++.++++++|++.+
T Consensus 135 ~~~~~~~~~~~~~~~----~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~----~~~~~r~~~~~~~~~~~i~~~gr~~~ 206 (370)
T d2iw1a1 135 KSTKLMMLTDKQIAD----FQKHYQTEPERFQILPPGIYPDRKYSEQIPN----SREIYRQKNGIKEQQNLLLQVGSDFG 206 (370)
T ss_dssp CCCEEEESCHHHHHH----HHHHHCCCGGGEEECCCCCCGGGSGGGSCTT----HHHHHHHHTTCCTTCEEEEEECSCTT
T ss_pred cCceEEEecHHHHHH----HHHhcCCCcceEEEEEeecccccccccCchh----hhhhhhhccCCCccceEEEEEecccc
Confidence 455666666655444 4455788888999999999987654433221 14778899999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHhhccEEE
Q 023290 96 GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLAAIDVLV 175 (284)
Q Consensus 96 ~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~ad~~~ 175 (284)
.||++.+++|+..+.+.. ++..+.++|+++ ....+++++++++..+++.++|+.+++.++|+.||+++
T Consensus 207 ~Kg~~~li~a~~~l~~~~-------~~~~~~ii~g~~-----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adv~v 274 (370)
T d2iw1a1 207 RKGVDRSIEALASLPESL-------RHNTLLFVVGQD-----KPRKFEALAEKLGVRSNVHFFSGRNDVSELMAAADLLL 274 (370)
T ss_dssp TTTHHHHHHHHHTSCHHH-------HHTEEEEEESSS-----CCHHHHHHHHHHTCGGGEEEESCCSCHHHHHHHCSEEE
T ss_pred ccchhhhccccccccccc-------ccceeeeccccc-----cccccccccccccccccccccccccccccccccccccc
Confidence 999999999999886644 455666666544 23567888999999999999999999999999999999
Q ss_pred EcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeee-cCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 023290 176 QNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLH-PVGKEGITPLAKNIVKLATHVERRLTMGKRGYER 254 (284)
Q Consensus 176 ~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~-~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 254 (284)
+||. .|+||++++|||+||+|||+++.++..|++.++.+|+++ +++| +++++++|.++++|++.+++|+++|++.
T Consensus 275 ~ps~--~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d--~~~la~~i~~ll~d~~~~~~~~~~ar~~ 350 (370)
T d2iw1a1 275 HPAY--QEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFS--QEQLNEVLRKALTQSPLRMAWAENARHY 350 (370)
T ss_dssp ECCS--CCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCC--HHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred cccc--cccccceeeecccCCeeEEEeCCCChHHHhcCCCceEEEcCCCC--HHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 9998 899999999999999999999999999999999999765 6677 9999999999999999999999999998
Q ss_pred HHHhcCHHHHHHHHHHHHH
Q 023290 255 VKEIFQEHHMAERIAVVLK 273 (284)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~ 273 (284)
++ .|++..+.+++.++|+
T Consensus 351 ~~-~~~~~~~~~~~~~ii~ 368 (370)
T d2iw1a1 351 AD-TQDLYSLPEKAADIIT 368 (370)
T ss_dssp HH-HSCCSCHHHHHHHHHH
T ss_pred HH-HhChhHHHHHHHHHHh
Confidence 86 4777777777777764
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=4.3e-33 Score=242.38 Aligned_cols=242 Identities=17% Similarity=0.164 Sum_probs=187.4
Q ss_pred CCcccccccchhhHHHHHHHH-----HHHhcccCCCeEEEecCCccccchhhhhhh-----------HHHHHHHHHHHHh
Q 023290 15 PLVAGAMIDSHVTAEYWKNRT-----RERLRIKMPDTYVVHLGNSKELMEVAEDNV-----------AKRVLREHVRESL 78 (284)
Q Consensus 15 ~~~~~~i~~s~~~~~~~~~~~-----~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~-----------~~~~~~~~~r~~~ 78 (284)
..+|.++++|...++...... .........++.+|+||++.+.+.+..... ........++...
T Consensus 205 ~~ad~~~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 284 (477)
T d1rzua_ 205 QTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHF 284 (477)
T ss_dssp HHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHH
T ss_pred HhhhhhhhccHHHHHHHHHHhcCcchhhhhhhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhc
Confidence 457888888876554321110 011123456799999999988775532211 1223346677788
Q ss_pred CCCCC-CeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEE
Q 023290 79 GVRNE-DLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHF 157 (284)
Q Consensus 79 ~~~~~-~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~ 157 (284)
+++++ .++|+++||+.+.||++.+++|+.++.+ .+.+++++|.|.. .....++.....+ .+++.+
T Consensus 285 ~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~---------~~~~l~~~G~G~~---~~~~~~~~~~~~~--~~~v~~ 350 (477)
T d1rzua_ 285 RIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS---------LGGRLVVLGAGDV---ALEGALLAAASRH--HGRVGV 350 (477)
T ss_dssp TCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH---------TTCEEEEEECBCH---HHHHHHHHHHHHT--TTTEEE
T ss_pred ccccCCccEEEEEeeeeecCCcHHHHHHHHHHHh---------hCCeEEEEecCCc---hHHHHHHHHHhhc--CCeEEE
Confidence 87654 5789999999999999999999998866 6789999998752 2334444444444 468888
Q ss_pred eccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCC---------ceeeecCCCCC
Q 023290 158 VNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGT---------TGLLHPVGKEG 226 (284)
Q Consensus 158 ~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~---------~g~~~~~~d~~ 226 (284)
.+.. +.+..+|+.||++++||. +|+||++++|||+||+|||+|+.||++|++.++. +|++++++|
T Consensus 351 ~~~~~~~~~~~~~~~aD~~v~PS~--~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d-- 426 (477)
T d1rzua_ 351 AIGYNEPLSHLMQAGCDAIIIPSR--FEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVT-- 426 (477)
T ss_dssp EESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCS--
T ss_pred EcccChhHHHHHHHhCccccCCcc--ccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCC--
Confidence 8765 456678999999999999 8999999999999999999999999999998764 899999999
Q ss_pred hHHHHHHHHHHhh---CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 023290 227 ITPLAKNIVKLAT---HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK 277 (284)
Q Consensus 227 ~~~~~~~i~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (284)
+++++++|.++++ |++.+++|++++. .++|||+.++++++++|+++++
T Consensus 427 ~~~la~ai~~~l~~~~~~~~~~~~~~~a~---~~~fsw~~~a~~~~~lY~~ll~ 477 (477)
T d1rzua_ 427 LDGLKQAIRRTVRYYHDPKLWTQMQKLGM---KSDVSWEKSAGLYAALYSQLIS 477 (477)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHH---TCCCBHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhhhCCHHHHHHHHHHHH---HhhCCHHHHHHHHHHHHHHHhC
Confidence 9999999988775 8999999988774 4679999999999999999863
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=5.1e-32 Score=232.60 Aligned_cols=244 Identities=19% Similarity=0.165 Sum_probs=192.4
Q ss_pred cccccccchhhHHHHHHHHHHHhcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccccc-
Q 023290 17 VAGAMIDSHVTAEYWKNRTRERLRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSR- 95 (284)
Q Consensus 17 ~~~~i~~s~~~~~~~~~~~~~~~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~~- 95 (284)
+|.+++.+...... ....++....++.+++||+|.+.+.+..........+..+++++++. +.++++++|++..
T Consensus 187 ~d~v~~~~~~~~~~----~~~~~~~~~~ki~vi~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~G~~~~~ 261 (437)
T d2bisa1 187 ADIVTTVSRGYLID----EWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMD-EGVTFMFIGRFDRG 261 (437)
T ss_dssp SSEEEESCHHHHHH----THHHHGGGTTTEEECCCCCCTTTSCGGGCCSCHHHHHHHHHHHTTCC-SCEEEEEESCBCSS
T ss_pred hhhhcccchhhhhh----hhhhhccccCceEEEecccccccccccccchhhHHHHHhhhhhhhcc-CCceEEEeeccccc
Confidence 45555555544332 33445677889999999999998876544444444467788889876 4577889999974
Q ss_pred cccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHhhccE
Q 023290 96 GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDV 173 (284)
Q Consensus 96 ~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~~ad~ 173 (284)
.||++.+++|+..+.... +.++++|+++|.+.+. ....++...+. ..+.+.+.+.. +++..+++.||+
T Consensus 262 ~Kg~~~ll~a~~~~~~~~-----~~~~~~lvi~G~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~adi 331 (437)
T d2bisa1 262 QKGVDVLLKAIEILSSKK-----EFQEMRFIIIGKGDPE---LEGWARSLEEK--HGNVKVITEMLSREFVRELYGSVDF 331 (437)
T ss_dssp SSCHHHHHHHHHHHTTSG-----GGGGEEEEEECCBCHH---HHHHHHHHHHT--CTTEEEECSCCCHHHHHHHHTTCSE
T ss_pred chhHHHHHhhhccccccc-----ccccceeeeecccccc---cccchhhhccc--cccceeccccCcHHHHHHHHhhhcc
Confidence 799999999998874321 2278999999987531 22333333332 34466666664 679999999999
Q ss_pred EEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhh-CHHHHHHHHHHHH
Q 023290 174 LVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVERRLTMGKRGY 252 (284)
Q Consensus 174 ~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~-~~~~~~~~~~~~~ 252 (284)
++.||. .|++|++++|||+||+|||+++.|+..|++++ .+|+++++.| +++++++|.++++ +++.+++++++++
T Consensus 332 ~v~~s~--~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~~~~d--~~~la~~i~~ll~~~~~~~~~~~~~~~ 406 (437)
T d2bisa1 332 VIIPSY--FEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGD--PGELANAILKALELSRSDLSKFRENCK 406 (437)
T ss_dssp EEECCS--CCSSCHHHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEECTTC--HHHHHHHHHHHHTTTTSCTHHHHHHHH
T ss_pred cccccc--ccccchHHHHHHHCCCCEEEeCCCCcHHhEEC-CcEEEECCCC--HHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999998 89999999999999999999999999999865 5899999998 9999999999987 7788999999999
Q ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHhhcC
Q 023290 253 ERVKEIFQEHHMAERIAVVLKEVLKKSKS 281 (284)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (284)
+.++ +|||++++++++++|++++++...
T Consensus 407 ~~~~-~~s~~~~a~~~~~iY~~~i~r~~~ 434 (437)
T d2bisa1 407 KRAM-SFSWEKSAERYVKAYTGSIDRAFD 434 (437)
T ss_dssp HHHH-HSCHHHHHHHHHHHHHTCSCCBCT
T ss_pred HHHH-hCCHHHHHHHHHHHHHHHHHhHhh
Confidence 9875 699999999999999999887654
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.97 E-value=2.7e-30 Score=198.39 Aligned_cols=192 Identities=20% Similarity=0.249 Sum_probs=155.0
Q ss_pred CCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEecccc-ccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEec
Q 023290 52 GNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVS-RGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGS 130 (284)
Q Consensus 52 g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~-~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~ 130 (284)
|+|.+.|.+......+...+..+++++|++ +..+|+|+||+. ++||++.+++++..+.... .+++++|+++|.
T Consensus 1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~-----~~~~~~l~i~G~ 74 (196)
T d2bfwa1 1 GIDCSFWNESYLTGSRDERKKSLLSKFGMD-EGVTFMFIGRFDRGQKGVDVLLKAIEILSSKK-----EFQEMRFIIIGK 74 (196)
T ss_dssp CCCTTTSSGGGSCSCHHHHHHHHHHHTTCC-SCEEEEEESCBCSSSSCHHHHHHHHHHHTTSG-----GGGGEEEEEECC
T ss_pred CcChhhcCCCCCCchhHHHHHHHHHHhCCC-CCCEEEEEcCCCccccCHHHHHHHHHhhhccc-----CCCCeEEEEEee
Confidence 688888876654444455578899999995 666788999997 5899999999999885422 237899999998
Q ss_pred CCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcc
Q 023290 131 DMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTT 208 (284)
Q Consensus 131 ~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~ 208 (284)
+.+ ++...++...+.. ...+.+.+.. +++..+|+.||++++||. .|++|.+++|||+||+|||+++.++..
T Consensus 75 g~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~di~v~ps~--~e~~~~~~~Eam~~G~pvI~~~~~~~~ 147 (196)
T d2bfwa1 75 GDP---ELEGWARSLEEKH--GNVKVITEMLSREFVRELYGSVDFVIIPSY--FEPFGLVALEAMCLGAIPIASAVGGLR 147 (196)
T ss_dssp BCH---HHHHHHHHHHHHC--TTEEEECSCCCHHHHHHHHTTCSEEEECCS--CCSSCHHHHHHHHTTCEEEEESCHHHH
T ss_pred ccc---chhhhhhhhhhcc--ceeEEeeeccccccchhccccccccccccc--cccccccchhhhhcCceeeecCCCccc
Confidence 652 2334444444443 3355565654 689999999999999998 899999999999999999999999999
Q ss_pred eeeecCCceeeecCCCCChHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcC
Q 023290 209 EIVVNGTTGLLHPVGKEGITPLAKNIVKLAT-HVERRLTMGKRGYERVKEIFQ 260 (284)
Q Consensus 209 e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~ 260 (284)
+++.+ .+|++++++| +++++++|.+++. +++.+.+++++|++++.+ ||
T Consensus 148 e~i~~-~~g~~~~~~~--~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~-fs 196 (196)
T d2bfwa1 148 DIITN-ETGILVKAGD--PGELANAILKALELSRSDLSKFRENCKKRAMS-FS 196 (196)
T ss_dssp HHCCT-TTCEEECTTC--HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-TC
T ss_pred eeecC-CceeeECCCC--HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh-CC
Confidence 98855 5899999998 9999999999887 789999999999998864 75
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.94 E-value=1.8e-26 Score=172.00 Aligned_cols=139 Identities=22% Similarity=0.325 Sum_probs=118.5
Q ss_pred EEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cC
Q 023290 86 LFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LT 163 (284)
Q Consensus 86 ~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~ 163 (284)
.++|+|++.++||++.+++|+.++ ++.+++++|.+.... ..+.+.+.+.+.. .++|+|+|++ ++
T Consensus 14 ~~l~iGrl~~~K~~~~~i~a~~~l-----------~~~~l~ivg~~~~~~--~~~~~~~~~~~~~-~~~v~~~g~~~~~~ 79 (166)
T d2f9fa1 14 FWLSVNRIYPEKRIELQLEVFKKL-----------QDEKLYIVGWFSKGD--HAERYARKIMKIA-PDNVKFLGSVSEEE 79 (166)
T ss_dssp CEEEECCSSGGGTHHHHHHHHHHC-----------TTSCEEEEBCCCTTS--THHHHHHHHHHHS-CTTEEEEESCCHHH
T ss_pred EEEEEecCccccCHHHHHHHHHHh-----------cCCeEEEEEeccccc--chhhhhhhhcccc-cCcEEEeecccccc
Confidence 356999999999999999999876 778899999765432 3444544454443 4689999987 67
Q ss_pred HHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHH
Q 023290 164 VAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVER 243 (284)
Q Consensus 164 ~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~ 243 (284)
+..+|+.||++++||. .|++|++++|||++|+|||+++.++..+++.++.+|++++. | +++++++|..++++++.
T Consensus 80 ~~~~~~~ad~~i~ps~--~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~-d--~~~~~~~i~~l~~~~~~ 154 (166)
T d2f9fa1 80 LIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA-D--VNEIIDAMKKVSKNPDK 154 (166)
T ss_dssp HHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECS-C--HHHHHHHHHHHHHCTTT
T ss_pred cccccccccccccccc--cccccccccccccccccceeecCCcceeeecCCcccccCCC-C--HHHHHHHHHHHHhCHHH
Confidence 9999999999999999 89999999999999999999999999999999999998765 5 99999999999998763
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=99.93 E-value=5.3e-25 Score=188.82 Aligned_cols=246 Identities=11% Similarity=0.028 Sum_probs=183.9
Q ss_pred CCcccccccchhhHHHHHHHHHHHhccc------------CCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCC
Q 023290 15 PLVAGAMIDSHVTAEYWKNRTRERLRIK------------MPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRN 82 (284)
Q Consensus 15 ~~~~~~i~~s~~~~~~~~~~~~~~~~~~------------~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 82 (284)
-.+|.+...+...+..+...+....+.. ..++.++|+|+|++.+......... .....++..++
T Consensus 177 l~~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~-~~~~~l~~~~~--- 252 (456)
T d1uqta_ 177 CDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLP-PKLAQLKAELK--- 252 (456)
T ss_dssp TTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCC-HHHHHHHHHTT---
T ss_pred hccccccccCHHHHHHHHHHHHHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhcccHHH-HHHHHHHHhcC---
Confidence 3556666666665555554333333321 2257789999999877654332211 12345555543
Q ss_pred CCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChH----HHHHHHHHHHH-------cCC
Q 023290 83 EDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTK----FESELRNYVMQ-------KKI 151 (284)
Q Consensus 83 ~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~----~~~~l~~~~~~-------~~~ 151 (284)
++.+|+++||+++.||++.+++|+.++.+..++. ..++.++++|.+...... ...++.+++.+ .+.
T Consensus 253 ~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~---~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~ 329 (456)
T d1uqta_ 253 NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQH---HGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGW 329 (456)
T ss_dssp TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGG---TTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTB
T ss_pred CCeEEEEeCCCchhhchHHHHHHHHHHHHhCccc---cccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCC
Confidence 6788999999999999999999999998866543 146788888876544422 22333333332 245
Q ss_pred CCcEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCC-----EEEcCCCCcceeeecCCceeeecCCC
Q 023290 152 QDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLP-----VLGTAAGGTTEIVVNGTTGLLHPVGK 224 (284)
Q Consensus 152 ~~~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~P-----vi~~~~~~~~e~v~~~~~g~~~~~~d 224 (284)
.+.+.+.+.. +++..+|+.||+++.||. .||||++++|||+||+| +|+|+.+|..+.+. +|++++|.|
T Consensus 330 ~~~v~~~~~~~~~~l~a~~~~Adv~v~~s~--~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~---~g~lVnP~d 404 (456)
T d1uqta_ 330 TPLYYLNQHFDRKLLMKIFRYSDVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYD 404 (456)
T ss_dssp CSEEEECSCCCHHHHHHHHHHCSEEEECCS--SBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEECTTC
T ss_pred CceeeccCCcCHHHHhHHHhhhceeecCCc--cCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHHHhC---CeEEECcCC
Confidence 5567777764 789999999999999999 99999999999999999 89999999999884 389999999
Q ss_pred CChHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 023290 225 EGITPLAKNIVKLAT-HVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEV 275 (284)
Q Consensus 225 ~~~~~~~~~i~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (284)
++++|++|.++++ ++++++++.+++++.+. +|+....++.+++-++++
T Consensus 405 --~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~-~~~~~~W~~~fl~~l~~~ 453 (456)
T d1uqta_ 405 --RDEVAAALDRALTMSLAERISRHAEMLDVIV-KNDINHWQECFISDLKQI 453 (456)
T ss_dssp --HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHS
T ss_pred --HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHhh
Confidence 9999999999998 67889999999999987 599999999988888764
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=98.83 E-value=2.2e-08 Score=81.50 Aligned_cols=96 Identities=19% Similarity=0.063 Sum_probs=71.9
Q ss_pred CCCcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC-------cceeeecCCceeeecCC
Q 023290 151 IQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG-------TTEIVVNGTTGLLHPVG 223 (284)
Q Consensus 151 ~~~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~-------~~e~v~~~~~g~~~~~~ 223 (284)
...++...++.+++.++|+.||++|..+ .+.++.|++++|+|+|+..... +.+.+++.+.|+.++..
T Consensus 229 ~~~~~~v~~f~~~~~~lm~~adl~It~~------G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~ 302 (351)
T d1f0ka_ 229 GQPQHKVTEFIDDMAAAYAWADVVVCRS------GALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQP 302 (351)
T ss_dssp TCTTSEEESCCSCHHHHHHHCSEEEECC------CHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGG
T ss_pred ccccceeeeehhhHHHHHHhCchhhccc------cchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEechh
Confidence 3457888888899999999999999543 3579999999999999764321 23355566678888765
Q ss_pred CCChHHHHHHHHHHhhCHHHHHHHHHHHHHH
Q 023290 224 KEGITPLAKNIVKLATHVERRLTMGKRGYER 254 (284)
Q Consensus 224 d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 254 (284)
+.+.+.+.++|..+ +++.+.+|++++++.
T Consensus 303 ~~~~e~l~~~l~~l--~~~~~~~~~~~~~~~ 331 (351)
T d1f0ka_ 303 QLSVDAVANTLAGW--SRETLLTMAERARAA 331 (351)
T ss_dssp GCCHHHHHHHHHTC--CHHHHHHHHHHHHHT
T ss_pred hCCHHHHHHHHHhh--CHHHHHHHHHHHHcc
Confidence 55577888887765 667778888887753
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=98.81 E-value=3.6e-07 Score=80.69 Aligned_cols=142 Identities=15% Similarity=0.071 Sum_probs=103.9
Q ss_pred CCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhc-cCCCCeEEEEEecCCCCChHHHHHHH---HHHHHc----CC
Q 023290 80 VRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKK-LEVPSVHAVIIGSDMNAQTKFESELR---NYVMQK----KI 151 (284)
Q Consensus 80 ~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~-~~~~~~~l~i~G~~~~~~~~~~~~l~---~~~~~~----~~ 151 (284)
++++.++++++-|+...|...+++.-+..+...+++.. ....++++++.|...|.+..-++-++ +.++.. .+
T Consensus 522 ldp~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~~gK~iIk~I~~va~~in~dp~~ 601 (796)
T d1l5wa_ 522 INPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLV 601 (796)
T ss_dssp CCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTT
T ss_pred cChhhccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEEEcCCCCCchHHHHHHHHHHHHHHHHhcCChhh
Confidence 56888999999999999999986666666655555421 01136899999998877654444333 222211 12
Q ss_pred C--CcEEEeccc-cCH-HHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeec--CCceeeec
Q 023290 152 Q--DRVHFVNKT-LTV-APYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN--GTTGLLHP 221 (284)
Q Consensus 152 ~--~~v~~~~~~-~~~-~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~--~~~g~~~~ 221 (284)
. .+|.|+... -++ ..+++.|||.+..++...|..|++-+-||..|.+.+++-.|...|..++ +.||+.+-
T Consensus 602 ~~~~kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f~fG 677 (796)
T d1l5wa_ 602 GDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFG 677 (796)
T ss_dssp GGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred ccceeEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHcCCeeeecccchHHHHHHhcCccceEEec
Confidence 2 268888865 233 4567999999988877789999999999999999999999998888764 77888874
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.76 E-value=1.4e-06 Score=76.93 Aligned_cols=144 Identities=17% Similarity=0.078 Sum_probs=100.8
Q ss_pred CCCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhh-ccCCCCeEEEEEecCCCCChHHHHHHHHHH---HHc----C
Q 023290 79 GVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEK-KLEVPSVHAVIIGSDMNAQTKFESELRNYV---MQK----K 150 (284)
Q Consensus 79 ~~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~-~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~---~~~----~ 150 (284)
.++++.++++++-|+...|...+.+.-+..+..++++. .....++++++.|...|.+...+.-++... +.. .
T Consensus 545 ~ldp~~lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~IFaGKAhP~d~~gK~iIk~I~~va~~in~dp~ 624 (824)
T d2gj4a1 545 HINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPV 624 (824)
T ss_dssp CCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTT
T ss_pred CCCcchhhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCCeEEEEeCCCCCccHHHHHHHHHHHHHHHHHhcChh
Confidence 36788899999999999999887443332222233321 112347899999998777654444343221 211 1
Q ss_pred CC--CcEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCCcceeeec--CCceeeecC
Q 023290 151 IQ--DRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGGTTEIVVN--GTTGLLHPV 222 (284)
Q Consensus 151 ~~--~~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~~~e~v~~--~~~g~~~~~ 222 (284)
+. .+|.|+... .-...+++.||+.+..|....|..|++-+-+|..|.+.+++-.|...|+.++ +.||+.+-.
T Consensus 625 ~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~~fG~ 702 (824)
T d2gj4a1 625 VGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGM 702 (824)
T ss_dssp TGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSC
T ss_pred hccceeEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHcCCeeeccccchHHHHHHhcCcccEEEeCC
Confidence 22 258888764 3334578999999998887789999999999999999999999998887764 678888743
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.61 E-value=7e-08 Score=79.75 Aligned_cols=114 Identities=11% Similarity=0.079 Sum_probs=79.8
Q ss_pred CCCCcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceeeecCCceeeecCCCC
Q 023290 150 KIQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKE 225 (284)
Q Consensus 150 ~~~~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v~~~~~g~~~~~~d~ 225 (284)
..++++.+.++. ....++..+|++|. .|..+++.||+++|+|+|+....+ +...+++.+.|+.++..+.
T Consensus 283 ~~~~~v~~~~~~-p~~~ll~~~~~~I~------hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~~~~~ 355 (401)
T d1rrva_ 283 DDRDDCFAIDEV-NFQALFRRVAAVIH------HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTP 355 (401)
T ss_dssp CCCTTEEEESSC-CHHHHGGGSSEEEE------CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCC
T ss_pred cCCCCEEEEecc-CcHHHhhhccEEEe------cCCchHHHHHHHhCCCEEEecccccHHHHHHHHHHCCCEEEcCcCCC
Confidence 346789999987 57788999999994 334679999999999999876654 4455666678998888766
Q ss_pred ChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Q 023290 226 GITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLK 277 (284)
Q Consensus 226 ~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (284)
+++.++++|.++++ ++.+++ +++ +.+....+ -+.+..+++++.+.
T Consensus 356 ~~~~L~~ai~~vl~-~~~r~~----a~~-~~~~~~~~-g~~~aa~~ie~~~~ 400 (401)
T d1rrva_ 356 TFESLSAALTTVLA-PETRAR----AEA-VAGMVLTD-GAAAAADLVLAAVG 400 (401)
T ss_dssp CHHHHHHHHHHHTS-HHHHHH----HHH-HTTTCCCC-HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhC-HHHHHH----HHH-HHHHHhhc-CHHHHHHHHHHHhC
Confidence 68999999999994 543333 332 22223222 34555666655543
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.60 E-value=2.6e-07 Score=75.99 Aligned_cols=114 Identities=12% Similarity=0.089 Sum_probs=79.7
Q ss_pred CCCcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC--------cceeeecCCceeeecC
Q 023290 151 IQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG--------TTEIVVNGTTGLLHPV 222 (284)
Q Consensus 151 ~~~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~--------~~e~v~~~~~g~~~~~ 222 (284)
.++++.+.++. +...++..+|++|..+- .+++.|||++|+|+|+....+ +.+.+.+.+.|+.++.
T Consensus 268 ~~~~v~i~~~~-p~~~ll~~a~~~v~hgG------~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~ 340 (391)
T d1pn3a_ 268 DGADCFVVGEV-NLQELFGRVAAAIHHDS------AGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDG 340 (391)
T ss_dssp CCTTCCEESSC-CHHHHHTTSSCEEEESC------HHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECC
T ss_pred CCCCEEEeccc-CHHHHHhhccEEEecCc------hHHHHHHHHhCCcEEEeccccCCcchHHHHHHHHHHCCCEEEcCc
Confidence 45689999988 57789999999996553 468999999999999876443 2445566678998888
Q ss_pred CCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Q 023290 223 GKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVLKK 278 (284)
Q Consensus 223 ~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (284)
.+.++++++++|.+++++ +.+ +++++.. +....+ -..+..+.+.+.+..
T Consensus 341 ~~~~~~~l~~~i~~~l~~-~~r----~~a~~~a-~~~~~~-g~~~aa~~i~~~l~~ 389 (391)
T d1pn3a_ 341 PVPTIDSLSAALDTALAP-EIR----ARATTVA-DTIRAD-GTTVAAQLLFDAVSL 389 (391)
T ss_dssp SSCCHHHHHHHHHHHTST-THH----HHHHHHG-GGSCSC-HHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhCH-HHH----HHHHHHH-HHHHhc-CHHHHHHHHHHHHHh
Confidence 776689999999999964 333 2333322 223322 334555566665554
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=98.54 E-value=5.7e-07 Score=73.91 Aligned_cols=83 Identities=10% Similarity=-0.006 Sum_probs=66.7
Q ss_pred CCCcEEEeccccCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceeeecCCceeeecCCCCC
Q 023290 151 IQDRVHFVNKTLTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVNGTTGLLHPVGKEG 226 (284)
Q Consensus 151 ~~~~v~~~~~~~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v~~~~~g~~~~~~d~~ 226 (284)
.++++++.++. ....+|..+|++|+ .|..+++.||+++|+|+|+....+ +...+++.+.|+.++..+.+
T Consensus 283 ~~~nv~~~~~~-p~~~~l~~~~~~V~------hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~~ 355 (401)
T d1iira_ 283 DGADCFAIGEV-NHQVLFGRVAAVIH------HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPT 355 (401)
T ss_dssp CGGGEEECSSC-CHHHHGGGSSEEEE------CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCC
T ss_pred CCCCEEEEecc-CHHHHHhhcCEEEe------cCCchHHHHHHHhCCCEEEccccccHHHHHHHHHHCCCEEEcCcCCCC
Confidence 46789999997 56789999999994 344679999999999999975443 44456666789888887667
Q ss_pred hHHHHHHHHHHhhC
Q 023290 227 ITPLAKNIVKLATH 240 (284)
Q Consensus 227 ~~~~~~~i~~l~~~ 240 (284)
+++++++|.+++++
T Consensus 356 ~~~l~~ai~~~l~~ 369 (401)
T d1iira_ 356 FDSLSAALATALTP 369 (401)
T ss_dssp HHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHHhCH
Confidence 99999999999953
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.39 E-value=1.6e-06 Score=71.01 Aligned_cols=200 Identities=14% Similarity=0.033 Sum_probs=121.7
Q ss_pred hcccCCCeEEEecCCccccchhhhhhhHHHHHHHHHHHHhCCCCCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhcc
Q 023290 39 LRIKMPDTYVVHLGNSKELMEVAEDNVAKRVLREHVRESLGVRNEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKL 118 (284)
Q Consensus 39 ~~~~~~~i~vi~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~ 118 (284)
.|..+.+|.++.++.-...... ....+......++.+.++..-+....+....+.+++..+...
T Consensus 161 ~Ge~~~~I~~vG~p~~D~i~~~----------~~~~~~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~------ 224 (373)
T d1v4va_ 161 EGKREEGILVTGQTGVDAVLLA----------AKLGRLPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEA------ 224 (373)
T ss_dssp TTCCGGGEEECCCHHHHHHHHH----------HHHCCCCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHH------
T ss_pred hcccccceeecccchhhHHHhh----------hhhcccccccccccceeEEeccccccchHHHHHHHHHHHhhh------
Confidence 4777778877775532111000 011111223445566666666666666667777777666542
Q ss_pred CCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcC
Q 023290 119 EVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQ 196 (284)
Q Consensus 119 ~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G 196 (284)
..++.+++..... ........ +......++.++... .++..++..|++++..| |..+.||.++|
T Consensus 225 -~~~~~~i~p~~~~---~~~~~~~~---~~~~~~~n~~~~~~l~~~~~l~ll~~s~~vignS-------ssgi~Ea~~lg 290 (373)
T d1v4va_ 225 -FPHLTFVYPVHLN---PVVREAVF---PVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDS-------GGLQEEGAALG 290 (373)
T ss_dssp -CTTSEEEEECCSC---HHHHHHHH---HHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESC-------HHHHHHHHHTT
T ss_pred -cccceeeeeeccc---ccchhhhh---hhhcccccceeeccchHHHHHHHhhhceeEeccc-------chhhhcchhhc
Confidence 2566666554322 11222222 233344588888875 67888899999999666 55788999999
Q ss_pred CCEEEc-CCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 023290 197 LPVLGT-AAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEV 275 (284)
Q Consensus 197 ~Pvi~~-~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (284)
+|+|.- +.+.-++.++.+.+ +++.. | .+++.+++..++.+++.+..+.. ....|.--..++++.+.+.+.
T Consensus 291 ~P~Inir~~~eRqeg~~~g~n-vlv~~-d--~~~I~~~i~~~l~~~~~~~~~~~-----~~npYGdG~as~rI~~~L~~~ 361 (373)
T d1v4va_ 291 VPVVVLRNVTERPEGLKAGIL-KLAGT-D--PEGVYRVVKGLLENPEELSRMRK-----AKNPYGDGKAGLMVARGVAWR 361 (373)
T ss_dssp CCEEECSSSCSCHHHHHHTSE-EECCS-C--HHHHHHHHHHHHTCHHHHHHHHH-----SCCSSCCSCHHHHHHHHHHHH
T ss_pred CcEEEeCCCccCHHHHhcCee-EEcCC-C--HHHHHHHHHHHHcCHHHHhhccc-----CCCCCCCCHHHHHHHHHHHHH
Confidence 999987 44555555555544 44444 4 89999999999999887766533 223355455566666666655
Q ss_pred HH
Q 023290 276 LK 277 (284)
Q Consensus 276 ~~ 277 (284)
+.
T Consensus 362 ~~ 363 (373)
T d1v4va_ 362 LG 363 (373)
T ss_dssp TT
T ss_pred hC
Confidence 53
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=97.86 E-value=7.3e-05 Score=61.02 Aligned_cols=112 Identities=21% Similarity=0.184 Sum_probs=73.8
Q ss_pred cCCCCcEEEeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCC-CCcceeeecCCceeeecCCCC
Q 023290 149 KKIQDRVHFVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAA-GGTTEIVVNGTTGLLHPVGKE 225 (284)
Q Consensus 149 ~~~~~~v~~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~-~~~~e~v~~~~~g~~~~~~d~ 225 (284)
....++|.++.+. .++..++..|++++.-| |..+.||-.+|+|+|.-.. +.-++.++.+ +-++++.+
T Consensus 252 ~~~~~ni~~~~~l~~~~fl~llk~s~~vIgnS-------ss~i~Ea~~lg~P~Inir~~tERqe~~~~g-~nilv~~~-- 321 (377)
T d1o6ca_ 252 FGDSDRVHLIEPLEVIDFHNFAAKSHFILTDS-------GGVQEEAPSLGKPVLVLRDTTERPEGVEAG-TLKLAGTD-- 321 (377)
T ss_dssp --CCSSEEECCCCCHHHHHHHHHHCSEEEEC---------CHHHHGGGGTCCEEEECSCCC---CTTTT-SSEEECSC--
T ss_pred cccccceEeccccchHHHHHHHhhhheeeccc-------chhHHhhhhhhceEEEeCCCCcCcchhhcC-eeEECCCC--
Confidence 3445689998876 67888999999999666 3468899999999997644 3334555444 33556553
Q ss_pred ChHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Q 023290 226 GITPLAKNIVKLATHVERRLTMGKRGYERVKEIFQEHHMAERIAVVLKEVL 276 (284)
Q Consensus 226 ~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (284)
.+++.+++..++.++..++.+.. ....|.--..++++.+++.+-+
T Consensus 322 -~~~I~~~i~~~l~~~~~~~~~~~-----~~npYGdG~as~rI~~~L~~~~ 366 (377)
T d1o6ca_ 322 -EENIYQLAKQLLTDPDEYKKMSQ-----ASNPYGDGEASRRIVEELLFHY 366 (377)
T ss_dssp -HHHHHHHHHHHHHCHHHHHHHHH-----CCCTTCCSCHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHhChHHHhhhcc-----CCCCCCCChHHHHHHHHHHHhh
Confidence 89999999999998877665422 2223544455666666665443
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=97.78 E-value=0.00016 Score=58.83 Aligned_cols=150 Identities=17% Similarity=0.189 Sum_probs=89.8
Q ss_pred cccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccc--cCHHHHHhhccE
Q 023290 96 GKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKT--LTVAPYLAAIDV 173 (284)
Q Consensus 96 ~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~--~~~~~~~~~ad~ 173 (284)
.+....++.++..+.+ ...++.+++..... ........ +......++.+++.. .++..++..|++
T Consensus 219 ~~~~~~i~~~l~~~~~-------~~~~~~ii~p~~~~---~~~~~~~~---~~~~~~~ni~~~~~l~~~~fl~ll~~a~~ 285 (376)
T d1f6da_ 219 GRGFEEICHALADIAT-------THQDIQIVYPVHLN---PNVREPVN---RILGHVKNVILIDPQEYLPFVWLMNHAWL 285 (376)
T ss_dssp CHHHHHHHHHHHHHHH-------HCTTEEEEEECCBC---HHHHHHHH---HHHTTCTTEEEECCCCHHHHHHHHHHCSE
T ss_pred hhhHHHHHHHHhhhhh-------hcceeEEecccccc---hhhhhhHh---hhhcccccceeeccccHHHHHHHHhhceE
Confidence 3445556666655544 22566665544321 11122222 223344588888875 577788999999
Q ss_pred EEEcCCCCcCccchhHHHHHhcCCCEEEcCC-CCcceeeecCCceeeecCCCCChHHHHHHHHHHhhCHHHHHHHHHHHH
Q 023290 174 LVQNSQAWGECFGRITIEAMAFQLPVLGTAA-GGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATHVERRLTMGKRGY 252 (284)
Q Consensus 174 ~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~-~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 252 (284)
++.-| |..+.||-.+|+|+|.-.. ..-++.+..+ +-+++.+ | .+++.+++.++++++..+..+.
T Consensus 286 vignS-------ssgi~Ea~~lg~P~Inir~~ter~~~~~~g-~~i~v~~-~--~~~I~~ai~~~l~~~~~~~~~~---- 350 (376)
T d1f6da_ 286 ILTDS-------GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLVGT-D--KQRIVEEVTRLLKDENEYQAMS---- 350 (376)
T ss_dssp EEESS-------SGGGGTGGGGTCCEEECSSCCSCHHHHHHT-SEEECCS-S--HHHHHHHHHHHHHCHHHHHHHH----
T ss_pred EEecC-------cchHhhHHHhCCCEEEcCCCccCccceecC-eeEECCC-C--HHHHHHHHHHHHhChHhhhhhc----
Confidence 99776 4477899999999996532 2334454434 4455554 3 8999999999998876554332
Q ss_pred HHHHHhcCHHHHHHHHHHHHHH
Q 023290 253 ERVKEIFQEHHMAERIAVVLKE 274 (284)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~ 274 (284)
.....|.--..++++.+++++
T Consensus 351 -~~~npYGdG~as~rI~~iLk~ 371 (376)
T d1f6da_ 351 -RAHNPYGDGQACSRILEALKN 371 (376)
T ss_dssp -HSCCTTCCSCHHHHHHHHHHH
T ss_pred -cCCCCCCCChHHHHHHHHHHh
Confidence 122234444556666666643
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=97.73 E-value=0.00024 Score=58.83 Aligned_cols=83 Identities=18% Similarity=0.068 Sum_probs=56.1
Q ss_pred CcEEEeccc-cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----Cccee-eecCCceeeecCCC--
Q 023290 153 DRVHFVNKT-LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEI-VVNGTTGLLHPVGK-- 224 (284)
Q Consensus 153 ~~v~~~~~~-~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~e~-v~~~~~g~~~~~~d-- 224 (284)
+++.+..+. ......+..||++|. -|..+++.||+.+|+|+|+.... .+... ++..+.|+.++...
T Consensus 330 ~n~~v~~~~pq~~~l~~p~~~~fIt------HGG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~~ 403 (461)
T d2acva1 330 GKGMICGWAPQVEVLAHKAIGGFVS------HCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRK 403 (461)
T ss_dssp CSEEEESSCCHHHHHHSTTEEEEEE------CCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCT
T ss_pred CCeEEEecCCHHHHHhcccCCEEEe------cCCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeeccccc
Confidence 466666654 122234589999994 23356999999999999997543 23333 34556787765432
Q ss_pred ----CChHHHHHHHHHHhhCH
Q 023290 225 ----EGITPLAKNIVKLATHV 241 (284)
Q Consensus 225 ----~~~~~~~~~i~~l~~~~ 241 (284)
.+.++++++|.++++++
T Consensus 404 ~~~~~t~~~l~~a~~~vl~~d 424 (461)
T d2acva1 404 GSDVVAAEEIEKGLKDLMDKD 424 (461)
T ss_dssp TCCCCCHHHHHHHHHHHTCTT
T ss_pred cCCccCHHHHHHHHHHHhhCC
Confidence 24899999999999753
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=97.67 E-value=0.00099 Score=55.14 Aligned_cols=93 Identities=17% Similarity=0.110 Sum_probs=65.2
Q ss_pred CCcEEEeccccCHHHHH--hhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCC----Ccceee-ecCCceeeecCCC
Q 023290 152 QDRVHFVNKTLTVAPYL--AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAG----GTTEIV-VNGTTGLLHPVGK 224 (284)
Q Consensus 152 ~~~v~~~~~~~~~~~~~--~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~----~~~e~v-~~~~~g~~~~~~d 224 (284)
++||.+..+. ....++ .+++++|. -|..+++.||+..|+|.|+.... .+...+ +..+.|+.++. +
T Consensus 345 ~~Nv~~~~~~-Pq~~lL~hp~~~~fIt------HGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l~~-~ 416 (473)
T d2pq6a1 345 ADRGLIASWC-PQDKVLNHPSIGGFLT------HCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDT-N 416 (473)
T ss_dssp TTTEEEESCC-CHHHHHTSTTEEEEEE------CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCS-S
T ss_pred cCceEEeeeC-CHHHHhcCCcCcEEEe------cCCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEeeCC-C
Confidence 3589888886 345567 57888883 33356999999999999988643 233344 34467888774 4
Q ss_pred CChHHHHHHHHHHhhCHHHHHHHHHHHHH
Q 023290 225 EGITPLAKNIVKLATHVERRLTMGKRGYE 253 (284)
Q Consensus 225 ~~~~~~~~~i~~l~~~~~~~~~~~~~~~~ 253 (284)
.+.++++++|.+++.|+.- +++.+++.+
T Consensus 417 ~t~~~l~~ai~~vl~d~~~-~~~r~~a~~ 444 (473)
T d2pq6a1 417 VKREELAKLINEVIAGDKG-KKMKQKAME 444 (473)
T ss_dssp CCHHHHHHHHHHHHTSHHH-HHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcCChH-HHHHHHHHH
Confidence 4699999999999999752 234444443
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=97.45 E-value=0.00041 Score=57.40 Aligned_cols=84 Identities=17% Similarity=0.091 Sum_probs=62.1
Q ss_pred CCcEEEeccccCHHHHH--hhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceeeec-CCceeeecCCC
Q 023290 152 QDRVHFVNKTLTVAPYL--AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIVVN-GTTGLLHPVGK 224 (284)
Q Consensus 152 ~~~v~~~~~~~~~~~~~--~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v~~-~~~g~~~~~~d 224 (284)
+.++.+..+.. ...++ ..++++|. -|...++.||+..|+|+|+....+ +...+.+ .+.|+.++...
T Consensus 318 ~~nv~~~~~~p-q~~lL~hp~~~~fIt------HGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~ 390 (450)
T d2c1xa1 318 RGYGMVVPWAP-QAEVLAHEAVGAFVT------HCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGV 390 (450)
T ss_dssp TTTEEEESCCC-HHHHHTSTTEEEEEE------CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGS
T ss_pred cccccccccCC-hHhhhccCceeEEEc------cCCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecCCC
Confidence 35788888763 33455 67788883 233569999999999999886543 3334433 57898888776
Q ss_pred CChHHHHHHHHHHhhCHH
Q 023290 225 EGITPLAKNIVKLATHVE 242 (284)
Q Consensus 225 ~~~~~~~~~i~~l~~~~~ 242 (284)
.+.+++.++|.++++|+.
T Consensus 391 ~t~~~l~~ai~~vL~d~~ 408 (450)
T d2c1xa1 391 FTKSGLMSCFDQILSQEK 408 (450)
T ss_dssp CCHHHHHHHHHHHHHSHH
T ss_pred cCHHHHHHHHHHHhcCcH
Confidence 668999999999999975
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.20 E-value=0.00064 Score=56.36 Aligned_cols=84 Identities=13% Similarity=0.095 Sum_probs=59.3
Q ss_pred CCcEEEeccccCHHHHH--hhccEEEEcCCCCcCccchhHHHHHhcCCCEEEcCCCC----cceee-ecCCceeeecCCC
Q 023290 152 QDRVHFVNKTLTVAPYL--AAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTAAGG----TTEIV-VNGTTGLLHPVGK 224 (284)
Q Consensus 152 ~~~v~~~~~~~~~~~~~--~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~~~~----~~e~v-~~~~~g~~~~~~d 224 (284)
+++|.+.++. ....++ .+++++|. -|..+++.||+.+|+|+|+....+ +...+ +.-+.|+.....+
T Consensus 333 ~~nv~~~~w~-Pq~~lL~hp~~~~fVt------HGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~~~ 405 (471)
T d2vcha1 333 KRGFVIPFWA-PQAQVLAHPSTGGFLT------HCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGD 405 (471)
T ss_dssp TTEEEEESCC-CHHHHHHSTTEEEEEE------CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCT
T ss_pred CCCeeecccC-CHHHHhcCccCCEEEe------cCCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEecCC
Confidence 4689999987 334577 47888883 233569999999999999876432 33333 3335677665443
Q ss_pred ---CChHHHHHHHHHHhhCHH
Q 023290 225 ---EGITPLAKNIVKLATHVE 242 (284)
Q Consensus 225 ---~~~~~~~~~i~~l~~~~~ 242 (284)
.+.++++++|.++++|++
T Consensus 406 ~~~~t~~~l~~ai~~vl~~~~ 426 (471)
T d2vcha1 406 DGLVRREEVARVVKGLMEGEE 426 (471)
T ss_dssp TSCCCHHHHHHHHHHHHTSTH
T ss_pred CCcCCHHHHHHHHHHHhCCcH
Confidence 248999999999999864
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=96.82 E-value=0.0037 Score=49.65 Aligned_cols=111 Identities=13% Similarity=0.138 Sum_probs=64.1
Q ss_pred HHHHHHHhCCCCCCeEEE-Eec-ccccccc--HHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHH
Q 023290 71 REHVRESLGVRNEDLLFA-IIN-SVSRGKG--QDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYV 146 (284)
Q Consensus 71 ~~~~r~~~~~~~~~~~i~-~~g-~~~~~k~--~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~ 146 (284)
+.....++++..++..++ ..| +..+.|. .+.+.+.+..+.+ .+.+++++|.+. ..+..+...
T Consensus 167 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~---------~~~~ivl~g~~~-----e~~~~~~~~ 232 (348)
T d1pswa_ 167 KSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID---------EGYQVVLFGSAK-----DHEAGNEIL 232 (348)
T ss_dssp HHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH---------TTCEEEECCCGG-----GHHHHHHHH
T ss_pred HHHHHHHhccccCCCeEEeccccchhhccccchHHHhhhHHHHhh---------cCCccccccccc-----hHHHHHHHH
Confidence 345566777766655444 443 2223344 3445555555443 567788888643 222222222
Q ss_pred HHcCC--CCcEE-Eeccc--cCHHHHHhhccEEEEcCCCCcCccchhHHHHHhcCCCEEEc
Q 023290 147 MQKKI--QDRVH-FVNKT--LTVAPYLAAIDVLVQNSQAWGECFGRITIEAMAFQLPVLGT 202 (284)
Q Consensus 147 ~~~~~--~~~v~-~~~~~--~~~~~~~~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~ 202 (284)
+.... ...+. +.|.. .++..+++.||++|.+.. ..+--|.++|+|+|+-
T Consensus 233 ~~~~~~~~~~~~~l~g~~sl~el~~li~~a~l~I~~Dt-------g~~HlAaa~g~p~i~l 286 (348)
T d1pswa_ 233 AALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDS-------GLMHVAAALNRPLVAL 286 (348)
T ss_dssp TTSCHHHHTTEEECTTTSCHHHHHHHHHTSSEEEEESS-------HHHHHHHHTTCCEEEE
T ss_pred HhhhcccccccccccCCccHHHHHHHHhcceeEeecCc-------cHHHHHHHcCCCEEEE
Confidence 22211 12333 34443 678889999999997764 3566799999999975
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=88.95 E-value=1.1 Score=31.32 Aligned_cols=72 Identities=13% Similarity=0.096 Sum_probs=47.8
Q ss_pred CCeEEEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEeccccCHHHHHh--hccEEEEcCCCCcCccchhHHHHHhcCCC
Q 023290 121 PSVHAVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNKTLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLP 198 (284)
Q Consensus 121 ~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~--~ad~~~~ps~~~~e~~~~~~~Eama~G~P 198 (284)
+++.++-+.+.. .+..+...++.+++....+.. ++.+++. ..|+++..+. ...-.-.+.+++..|++
T Consensus 24 ~~~~i~ai~d~~------~~~~~~~~~~~~~~~~~~~~~---~~~~ll~~~~iD~v~I~tp--~~~h~~~~~~~l~~g~~ 92 (184)
T d1ydwa1 24 PNATISGVASRS------LEKAKAFATANNYPESTKIHG---SYESLLEDPEIDALYVPLP--TSLHVEWAIKAAEKGKH 92 (184)
T ss_dssp TTEEEEEEECSS------HHHHHHHHHHTTCCTTCEEES---SHHHHHHCTTCCEEEECCC--GGGHHHHHHHHHTTTCE
T ss_pred CCCEEEEEEeCC------ccccccchhccccccceeecC---cHHHhhhccccceeeeccc--chhhcchhhhhhhccce
Confidence 677777555432 355667778888766655544 5556663 5688887776 33333467889999999
Q ss_pred EEEcC
Q 023290 199 VLGTA 203 (284)
Q Consensus 199 vi~~~ 203 (284)
|++-.
T Consensus 93 v~~EK 97 (184)
T d1ydwa1 93 ILLEK 97 (184)
T ss_dssp EEECS
T ss_pred eeccc
Confidence 99854
|
| >d1t9ba1 c.31.1.3 (A:290-460) Acetohydroxyacid synthase catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: DHS-like NAD/FAD-binding domain superfamily: DHS-like NAD/FAD-binding domain family: Pyruvate oxidase and decarboxylase, middle domain domain: Acetohydroxyacid synthase catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=86.70 E-value=3.4 Score=28.20 Aligned_cols=113 Identities=9% Similarity=-0.016 Sum_probs=54.9
Q ss_pred EEEEEecCCCCChHHHHHHHHHHHHcCCCC----------------cEEEeccc--cCHHHHHhhccEEEEcCCC--CcC
Q 023290 124 HAVIIGSDMNAQTKFESELRNYVMQKKIQD----------------RVHFVNKT--LTVAPYLAAIDVLVQNSQA--WGE 183 (284)
Q Consensus 124 ~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~----------------~v~~~~~~--~~~~~~~~~ad~~~~ps~~--~~e 183 (284)
-++++|.|-.......+.+.++++.++++- .+-..|.. .....++..||+++.-... +..
T Consensus 13 Pvii~G~G~~~~~~a~~~l~~lae~~g~Pv~tt~~~~g~~~~~hp~~~G~~g~~~~~~a~~~~~~~Dlvl~~G~~l~~~~ 92 (171)
T d1t9ba1 13 PVLYVGAGILNHADGPRLLKELSDRAQIPVTTTLQGLGSFDQEDPKSLDMLGMHGCATANLAVQNADLIIAVGARFDDRV 92 (171)
T ss_dssp EEEEECGGGGGSTTHHHHHHHHHHHTTCCEEECGGGTTSSCTTSTTEEEECSTTSCHHHHHHHHHCSEEEEESCCCCTTT
T ss_pred eEEEECcChhhhhhHHHHHHHHHHhcCCceeecccccccccCCcccccccccccccHHHHhhhhcccceeeccccccccc
Confidence 366777653222224566777888777641 12222222 2345688999998754321 122
Q ss_pred ccchhH------HHHHhcCCCEEEcCCCCcceeeecCCceeeecCCCCChHHHHHHHHHHhhC
Q 023290 184 CFGRIT------IEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGITPLAKNIVKLATH 240 (284)
Q Consensus 184 ~~~~~~------~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~~~~~d~~~~~~~~~i~~l~~~ 240 (284)
+++... ....--+..+|-.+... .++-+.....+-+. +| +..+.++|.+.+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~iI~Id~d~-~el~~~~~~d~~i~-~D--~~~~l~~L~~~l~~ 151 (171)
T d1t9ba1 93 TGNISKFAPEARRAAAEGRGGIIHFEVSP-KNINKVVQTQIAVE-GD--ATTNLGKMMSKIFP 151 (171)
T ss_dssp SCSGGGSSHHHHHHHHTTSCEEEEEESCG-GGSSSSSCCSEEEE-SC--HHHHHHHHHTTSCC
T ss_pred ccccchhhhhhhhcccCCCceEEEEeCCc-cccCCcccCceeEE-Ec--HHHHHHHHHHhccc
Confidence 222221 12344456666444332 12212111222221 33 77788887776654
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=85.26 E-value=3.1 Score=27.34 Aligned_cols=75 Identities=8% Similarity=0.041 Sum_probs=46.6
Q ss_pred EEEEecCCCCChHHHHHHHHHHHHcCCCCcEEEecc---ccCHHHHH-hhccEEEEcCCCCcCccchhHHHHHhcCCCEE
Q 023290 125 AVIIGSDMNAQTKFESELRNYVMQKKIQDRVHFVNK---TLTVAPYL-AAIDVLVQNSQAWGECFGRITIEAMAFQLPVL 200 (284)
Q Consensus 125 l~i~G~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~---~~~~~~~~-~~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi 200 (284)
+.++|... +.-+.+.+.+.+.. ++.+.+. .+.+.... ..+|++|-.|. .++..-.+-.|...|+|+|
T Consensus 2 I~v~Ga~G----rMG~~i~~~i~~~~---~~~l~~~~d~~~~~~~~~~~~~DvvIDFS~--p~~~~~~~~~~~~~~~~~V 72 (135)
T d1yl7a1 2 VGVLGAKG----KVGATMVRAVAAAD---DLTLSAELDAGDPLSLLTDGNTEVVIDFTH--PDVVMGNLEFLIDNGIHAV 72 (135)
T ss_dssp EEEETTTS----HHHHHHHHHHHHST---TSEEEEEECTTCCTHHHHTTTCSEEEECCC--TTTHHHHHHHHHHTTCEEE
T ss_pred EEEECCCC----HHHHHHHHHHHhCC---CCEEEEEEecCCchhhhccccCCEEEEccc--HHHHHHHHHHHHhcCCCEE
Confidence 45666322 24455555554432 2333222 13333333 57999999988 7777777888999999999
Q ss_pred EcCCCCcc
Q 023290 201 GTAAGGTT 208 (284)
Q Consensus 201 ~~~~~~~~ 208 (284)
+..+|-..
T Consensus 73 iGTTG~~~ 80 (135)
T d1yl7a1 73 VGTTGFTA 80 (135)
T ss_dssp ECCCCCCH
T ss_pred Eeccccch
Confidence 98777554
|
| >d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: FucT-like domain: Alpha1,3-fucosyltransferase FucT species: Helicobacter pylori [TaxId: 210]
Probab=81.11 E-value=2.9 Score=32.47 Aligned_cols=84 Identities=12% Similarity=-0.018 Sum_probs=57.6
Q ss_pred cCHHHHHhhccEEEEcCCCCcCc-cchhHHHHHhcCCCEEEcCCCCcceeeecCCceee-e-cCCCCChHHHHHHHHHHh
Q 023290 162 LTVAPYLAAIDVLVQNSQAWGEC-FGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLL-H-PVGKEGITPLAKNIVKLA 238 (284)
Q Consensus 162 ~~~~~~~~~ad~~~~ps~~~~e~-~~~~~~Eama~G~Pvi~~~~~~~~e~v~~~~~g~~-~-~~~d~~~~~~~~~i~~l~ 238 (284)
.+-.++++.....|+.=.....| +.-++.+|+.+|+-.|.-....+.+.+..+ +++ + +..+ ++++++.|..+-
T Consensus 223 ~~K~~~l~~ykF~l~~EN~~~~~YvTEKi~da~~~g~iPIy~G~~~i~~~f~~~--sfI~~~df~s--~~el~~~i~~l~ 298 (349)
T d2nzwa1 223 KNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFNPK--SFVNVHDFKN--FDEAIDYIKYLH 298 (349)
T ss_dssp SCHHHHHTTEEEEEEECSSCCTTCCCTHHHHHHHTTCEEEEESCTTGGGTSCGG--GSEEGGGSSS--HHHHHHHHHHHH
T ss_pred hhHHHHHhCCCeEEEECCcCCCCCcchHHHHHHhCCeEEEEECCCcHHHcCCCc--cEEEhhhCCC--HHHHHHHHHHHh
Confidence 56778888888888652211333 345899999999766666556666666432 333 2 2334 999999999999
Q ss_pred hCHHHHHHHHH
Q 023290 239 THVERRLTMGK 249 (284)
Q Consensus 239 ~~~~~~~~~~~ 249 (284)
.|++.+.++-.
T Consensus 299 ~n~~~Y~~~~~ 309 (349)
T d2nzwa1 299 THKNAYLDMLY 309 (349)
T ss_dssp TCHHHHHHHHH
T ss_pred cCHHHHHHHHh
Confidence 89988877543
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=80.58 E-value=2.8 Score=30.07 Aligned_cols=98 Identities=10% Similarity=0.043 Sum_probs=59.0
Q ss_pred CCCeEEEEeccccccccHHHHHHHHHHHHHHHHhhccCCCCeEEEEEecCCCCChHHHHHHHHHHHHcCCCC-cEEEecc
Q 023290 82 NEDLLFAIINSVSRGKGQDLFLHSFYESLELIKEKKLEVPSVHAVIIGSDMNAQTKFESELRNYVMQKKIQD-RVHFVNK 160 (284)
Q Consensus 82 ~~~~~i~~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~l~~~~~~~~~~~-~v~~~~~ 160 (284)
.+++.|..+|--...+ ..++.++.. .++++++-+-+. ..+..+...++++++. .+...
T Consensus 31 ~~~iriaiIG~G~~~~--~~~~~~~~~-----------~~~~~ivav~d~------~~~~a~~~~~~~~i~~~~~~~~-- 89 (221)
T d1h6da1 31 DRRFGYAIVGLGKYAL--NQILPGFAG-----------CQHSRIEALVSG------NAEKAKIVAAEYGVDPRKIYDY-- 89 (221)
T ss_dssp CCCEEEEEECCSHHHH--HTHHHHTTT-----------CSSEEEEEEECS------CHHHHHHHHHHTTCCGGGEECS--
T ss_pred CCCEEEEEEcCcHHHH--HHHHHHHHh-----------CCCceEEEEecC------CHHHHHHHHHhhcccccccccc--
Confidence 3567888888422211 123333322 267877755443 2466777888887753 23333
Q ss_pred ccCHHHHHh--hccEEEEcCCCCcCccchhHHHHHhcCCCEEEcC
Q 023290 161 TLTVAPYLA--AIDVLVQNSQAWGECFGRITIEAMAFQLPVLGTA 203 (284)
Q Consensus 161 ~~~~~~~~~--~ad~~~~ps~~~~e~~~~~~~Eama~G~Pvi~~~ 203 (284)
.++.++++ ..|+++..+. ...-.-.+.+||..|++|++-.
T Consensus 90 -~d~~ell~~~~iD~V~I~tp--~~~H~~~~~~al~~gk~v~~EK 131 (221)
T d1h6da1 90 -SNFDKIAKDPKIDAVYIILP--NSLHAEFAIRAFKAGKHVMCEK 131 (221)
T ss_dssp -SSGGGGGGCTTCCEEEECSC--GGGHHHHHHHHHHTTCEEEECS
T ss_pred -Cchhhhcccccceeeeeccc--hhhhhhHHHHhhhcchhhhcCC
Confidence 34455554 5788877665 3333457889999999999864
|