Citrus Sinensis ID: 023312
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 284 | ||||||
| 224144967 | 291 | predicted protein [Populus trichocarpa] | 0.947 | 0.924 | 0.677 | 1e-102 | |
| 357507827 | 299 | hypothetical protein MTR_7g080350 [Medic | 0.908 | 0.862 | 0.680 | 2e-97 | |
| 388499688 | 299 | unknown [Lotus japonicus] | 0.954 | 0.906 | 0.653 | 3e-97 | |
| 388514339 | 299 | unknown [Medicago truncatula] | 0.908 | 0.862 | 0.680 | 4e-97 | |
| 388507674 | 299 | unknown [Medicago truncatula] | 0.908 | 0.862 | 0.677 | 1e-96 | |
| 255547524 | 302 | conserved hypothetical protein [Ricinus | 0.985 | 0.927 | 0.650 | 2e-96 | |
| 388516347 | 299 | unknown [Medicago truncatula] | 0.908 | 0.862 | 0.673 | 7e-96 | |
| 356568523 | 297 | PREDICTED: UPF0510 protein INM02-like [G | 0.954 | 0.912 | 0.627 | 1e-94 | |
| 449485326 | 300 | PREDICTED: ER membrane protein complex s | 0.940 | 0.89 | 0.625 | 6e-93 | |
| 297735243 | 318 | unnamed protein product [Vitis vinifera] | 0.950 | 0.849 | 0.652 | 2e-92 |
| >gi|224144967|ref|XP_002325478.1| predicted protein [Populus trichocarpa] gi|118481091|gb|ABK92499.1| unknown [Populus trichocarpa] gi|222862353|gb|EEE99859.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/295 (67%), Positives = 227/295 (76%), Gaps = 26/295 (8%)
Query: 9 ALFLFFFSLLLFCHSSLAFESDELLVDDEEFGLEGGS-KPQIKPHEPA-PTRSTTTTTRR 66
A L F+LLL S AF+SDEL DEEFGLEGG+ +PQ + +P PTRST R
Sbjct: 4 AALLQVFALLLVISSLHAFQSDEL---DEEFGLEGGNLQPQERIPDPVVPTRSTPN--RV 58
Query: 67 KVSDQDSDSKIQFSLEHAFGDSDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGEDKE 126
K SD DSDSKIQ +LEHAFGDSDF PA TFSARLKT SHG QTLTKLRFSRN+FT +K+
Sbjct: 59 KYSDSDSDSKIQITLEHAFGDSDFFPAATFSARLKTWSHGAQTLTKLRFSRNSFTEVEKQ 118
Query: 127 KFEKLLQDDDFYRIRLPSNTVSPPGRDYIISSVKA----------------EGVNILAVN 170
KF+KLL+DD+FYRIRLPSN ++PPG+D++ISSV+A EGVNILAVN
Sbjct: 119 KFQKLLEDDEFYRIRLPSNVLNPPGKDFVISSVRARCLPRDGLDEHFVIHTEGVNILAVN 178
Query: 171 YGAFGACSYPRQLKLPHKWSFNSHTVLKNSEQAPRAPIFAEEVLGENGEGEIIPPPERSF 230
YG+ G C YPRQLKLP KWSFNSHTVLKNSEQAPR PIFAE++ GE GEG +PPPERSF
Sbjct: 179 YGSPGTCPYPRQLKLPAKWSFNSHTVLKNSEQAPRTPIFAEDLPGEQGEGVDVPPPERSF 238
Query: 231 WAKYWMYLIPLGLIVINAVTQAMNMPEEGVQGGGQT-QQSAAAIQRGTGSAVRRR 284
WAKYWMYLIPLGLIV+NA+TQAMN+PEE Q GQ+ Q AAAIQRG AVRRR
Sbjct: 239 WAKYWMYLIPLGLIVMNAMTQAMNLPEE--QATGQSGAQPAAAIQRGPNPAVRRR 291
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357507827|ref|XP_003624202.1| hypothetical protein MTR_7g080350 [Medicago truncatula] gi|355499217|gb|AES80420.1| hypothetical protein MTR_7g080350 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|388499688|gb|AFK37910.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
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| >gi|388514339|gb|AFK45231.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|388507674|gb|AFK41903.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|255547524|ref|XP_002514819.1| conserved hypothetical protein [Ricinus communis] gi|223545870|gb|EEF47373.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|388516347|gb|AFK46235.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356568523|ref|XP_003552460.1| PREDICTED: UPF0510 protein INM02-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449485326|ref|XP_004157134.1| PREDICTED: ER membrane protein complex subunit 10-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|297735243|emb|CBI17605.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 284 | ||||||
| TAIR|locus:2206270 | 292 | AT1G65270 "AT1G65270" [Arabido | 0.654 | 0.636 | 0.617 | 1.7e-59 |
| TAIR|locus:2206270 AT1G65270 "AT1G65270" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 129/209 (61%), Positives = 153/209 (73%)
Query: 28 ESDELLVDDEEFGLEGGSKPQ----IKPHEPAPXXXXXX-XXXXKVSDQ-DSDSKIQFSL 81
+SDELLVDD+EFGLEG +KP+ +P + SD D DSK+QF+L
Sbjct: 22 QSDELLVDDDEFGLEG-AKPRSTDLYTSSSSSPQQQQQTPTIRRRYSDPTDLDSKVQFTL 80
Query: 82 EHAFGDSDFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGEDKEKFEKLLQDDDFYRIR 141
EHAFGDSDF PAGTFSARLKT SHGG+TLTKLRFSRN F+ E+K+ F+ LL+ DDFYRIR
Sbjct: 81 EHAFGDSDFSPAGTFSARLKTWSHGGKTLTKLRFSRNDFSAEEKDAFKNLLKGDDFYRIR 140
Query: 142 LPSNTVSPPGRDYIISSVKA----------------EGVNILAVNYGAFGACSYPRQLKL 185
LPSN VSPPGR+++I+SV+A EG NILAV+YG+ GAC YPRQLKL
Sbjct: 141 LPSNVVSPPGREFVIASVRARCLPRDGLDEHFIIHMEGANILAVSYGSPGACQYPRQLKL 200
Query: 186 PHKWSFNSHTVLKNSEQAPRAPIFAEEVL 214
P KWSFNSHT+LK+SEQAPR PIF EE+L
Sbjct: 201 PAKWSFNSHTILKSSEQAPRTPIFTEEIL 229
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| estExt_fgenesh4_kg.C_LG_XIX0006 | SubName- Full=Putative uncharacterized protein; (291 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 284 | |||
| KOG4827 | 279 | consensus Uncharacterized conserved protein [Funct | 100.0 |
| >KOG4827 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
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Probab=100.00 E-value=8.6e-62 Score=435.17 Aligned_cols=242 Identities=53% Similarity=0.856 Sum_probs=224.4
Q ss_pred ccccccccccccccccccccCCCCCCC------CCCCCCCCCcccccccCCCCCCCCCceeEEEEeecCCCCceec-cce
Q 023312 24 SLAFESDELLVDDEEFGLEGGSKPQIK------PHEPAPTRSTTTTTRRKVSDQDSDSKIQFSLEHAFGDSDFVPA-GTF 96 (284)
Q Consensus 24 ~~~f~~de~~~d~~e~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~e~d~~ls~~LEHsl~d~~Ft~R-G~i 96 (284)
+.+|++||+|+||+||||+|+ .+... +++|....+..+.|++++.-++.|++++|+|||+|||.+|.+. |++
T Consensus 9 ~IAf~~de~ll~ddefgLEga-k~~~TdlY~~~Ssspqqqqq~~~iR~~~~dpTdldkk~QftlEhaFGdkdF~~anGtf 87 (279)
T KOG4827|consen 9 IIAFILDEFLLADDEFGLEGA-KNEFTDLYPLGSSSPQQQQQIEMIRAFDGDPTDLDKKAQFTLEHAFGDKDFEAANGTF 87 (279)
T ss_pred HHHHhccceeecccccccccc-ccccccccccCCCChhhhhhhhhhhhhcCCcccccchhhhhHHhhcccccccccccee
Confidence 379999999999999999999 66554 2223233667778888999999999999999999999999999 999
Q ss_pred eeccccCCCCCccceeeeeecCCCCHHHHHHHHHHhccCCcEEEEecccccCCCCCceEEEEEec---------------
Q 023312 97 SARLKTSSHGGQTLTKLRFSRNAFTGEDKEKFEKLLQDDDFYRIRLPSNTVSPPGRDYIISSVKA--------------- 161 (284)
Q Consensus 97 s~~lksss~G~~~l~sl~~sq~~LT~~e~~kLk~LA~~dglYRIRVps~v~~~~g~~yv~SSVkA--------------- 161 (284)
++|+|+|++|.+++.++|++.+.+..+|++.|+.+...|.||+||+|+++..|.|+++|+++|.|
T Consensus 88 SaR~ks~shgGkn~~klrf~~~dF~aeekdaF~n~lkgddf~kiqL~s~~i~PpgrefviasV~aRc~p~DGky~dE~fi 167 (279)
T KOG4827|consen 88 SARAKSSSHGGKNFLKLRFDPCDFLAEEKDAFHNFLKGDDFEKIQLHSLTIFPPGREFVIASVAARCDPEDGKYHDEAFI 167 (279)
T ss_pred EEEeecccCCCcceeeeccChhhhhhhHHHHHHHHHhcccHhhhccccceecCCcchhhhhhhheecCcccCccccceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ---CCCcEEEEEeecC-CCCCCCccCCCCCCcceeeeEEeeCCCCCCCchhhhhhhcc-ccCCCCCCCCCCchhHHhhhH
Q 023312 162 ---EGVNILAVNYGAF-GACSYPRQLKLPHKWSFNSHTVLKNSEQAPRAPIFAEEVLG-ENGEGEIIPPPERSFWAKYWM 236 (284)
Q Consensus 162 ---~~GnvigVsys~~-g~C~~~~~~~~~~~~~FnTtV~vr~~~~aP~Ta~fiek~E~-E~~~ge~~p~~erSFlaKYWm 236 (284)
++.||++++|.+| |.|+|+++++.+.+|+||++++....+|+|+|+.|.|++|+ |+.+||..++||||||+||||
T Consensus 168 ~h~egANiLa~s~GsPkGaCqyprqlklpakwsfnsHti~eSse~aP~T~~Fteei~g~en~ege~~~~~eRSF~AKYWM 247 (279)
T KOG4827|consen 168 CHDEGANILASSQGSPKGACQYPRQLKLPAKWSFNSHTIGESSEPAPDTAAFTEEIEGEENAEGEGADADERSFLAKYWM 247 (279)
T ss_pred eeccCcceeeeccCCCCccccCchhhcCccccccccceeccccCCCCCcHHHHHHHhccccccccCCCCcchhHHHHHHH
Confidence 4559999999876 89999999999999999999999999999999999999999 566889999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCccccCCCCCCcc
Q 023312 237 YLIPLGLIVINAVTQAMNMPEEGVQGGGQTQQ 268 (284)
Q Consensus 237 YIvP~vl~~mn~~~~a~~~PE~~~~~~g~~~~ 268 (284)
||||++|+|||+|.++.||.|+ +++||+|+
T Consensus 248 YiiPlglVVl~AV~qasnmAee--Pa~G~aG~ 277 (279)
T KOG4827|consen 248 YIIPLGLVVLFAVIQASNMAEE--PAAGAAGA 277 (279)
T ss_pred hhccchhhhhhhhhhccccccC--cccccccc
Confidence 9999999999999999999999 89999885
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00