Citrus Sinensis ID: 023344

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280---
MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYADVIIPRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD
cccEEEEEccccHHHHHHHHHHHHHcccccHHHHHccccEEEccccccHHHHHHHHHHHHHHHcccccccccccEEEEccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccccEEEEEEccccHHHHHHHHHHcccccccEEEEEEcccccccEEEEcccccccccEEEEEccccccHHHHHHHHHHHHHcccccccEEEEEEEEcHHHHHHHHHHccccEEEEEEccccccccccccccccccccccccccc
cccEEEEcccHHHHHHHHHHHHHHHHcccHHHHHHHHHcEEEccccccHHHHHHHHHHHHHHHcccHHHHHcccEEEccEcHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEcccccEEEEEEEcccEEEEEEccHHHHHHHHHHHHcccccEEEEEEEEccccccEEEEEEccccHHHcEEEEEccEEcccHHHHHHHHHHHcccccHHHEEEEccEEcHHHHHHHHHHccccEEEEcEEccEEcccccEEcccccHHHHHHcccc
mnmkifvdtdADVRLARRIRRDTVERGRDVDSVLEQYADviiprggdnHVAIDLIVQHIHTklgqhdlckiypnvyVIQSTFQIRGMHTLIrdrgiskhdfvFYSDRLIRLVVEHglghlpftekqvvtptgsmytgvdfcKKLCGVSIVRSGESMENALRACCKGikigkilihrdgdngkQLIYEklpndiseRHVLlldpvlatgnSANQAIQLLIEKGVPESHIIFLNlisapegihcvckrfpslkivTSEIDVALNeefrvipglgefgdryfgtdd
mnmkifvdtdadvrlarrirrdtvergrdvdsvLEQYADVIIPRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLghlpftekqvvtptgSMYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEfrvipglgefgdryfgtdd
MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYADVIIPRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAcckgikigkiLIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD
****IFVDTDADVRLARRIRRDTVERGRDVDSVLEQYADVIIPRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYF****
MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYADVIIPRGGDNHVAIDLIVQHI***************VYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD*
MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYADVIIPRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD
*NMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYADVIIPRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYADVIIPRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query283 2.2.26 [Sep-21-2011]
Q9FKS0486 Uridine kinase-like prote yes no 1.0 0.582 0.880 1e-153
Q9LK34483 Uridine kinase-like prote no no 1.0 0.585 0.870 1e-151
Q8VYB2466 Uridine kinase-like prote no no 1.0 0.607 0.810 1e-144
O65583469 Uridine kinase-like prote no no 1.0 0.603 0.800 1e-140
Q9LTY6465 Uridine kinase-like prote no no 1.0 0.608 0.750 1e-133
Q91YL3548 Uridine-cytidine kinase-l yes no 0.996 0.514 0.464 6e-77
Q9NWZ5548 Uridine-cytidine kinase-l yes no 0.996 0.514 0.464 9e-77
Q55EL3499 Uridine-cytidine kinase A yes no 0.989 0.561 0.450 3e-71
Q55GQ6216 Uracil phosphoribosyltran no no 0.749 0.981 0.560 2e-66
Q26998244 Uracil phosphoribosyltran N/A no 0.763 0.885 0.520 1e-64
>sp|Q9FKS0|UKL1_ARATH Uridine kinase-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=UKL1 PE=1 SV=1 Back     alignment and function desciption
 Score =  541 bits (1393), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 265/301 (88%), Positives = 279/301 (92%), Gaps = 18/301 (5%)

Query: 1   MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYA------------------DVII 42
           MNMKIFVDTDADVRLARRIRRDTVERGRDV+SVLEQYA                  DVII
Sbjct: 183 MNMKIFVDTDADVRLARRIRRDTVERGRDVNSVLEQYAKFVKPAFDDFVLPSKKYADVII 242

Query: 43  PRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFV 102
           PRGGDNHVA+DLI QHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIR++ ISKHDFV
Sbjct: 243 PRGGDNHVAVDLITQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIREKDISKHDFV 302

Query: 103 FYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRA 162
           FYSDRLIRLVVEHGLGHLPFTEKQVVTPTG++YTGVDFCKKLCGVSI+RSGESMENALRA
Sbjct: 303 FYSDRLIRLVVEHGLGHLPFTEKQVVTPTGAVYTGVDFCKKLCGVSIIRSGESMENALRA 362

Query: 163 CCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKG 222
           CCKGIKIGKILIHRDGDNGKQLIYEKLP+DISERHVLLLDPVLATGNSANQAI+LLI+KG
Sbjct: 363 CCKGIKIGKILIHRDGDNGKQLIYEKLPHDISERHVLLLDPVLATGNSANQAIELLIQKG 422

Query: 223 VPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 282
           VPE+HIIFLNLISAPEGIHCVCKRFP+LKIVTSEID  LN+EFRVIPGLGEFGDRYFGTD
Sbjct: 423 VPEAHIIFLNLISAPEGIHCVCKRFPALKIVTSEIDQCLNQEFRVIPGLGEFGDRYFGTD 482

Query: 283 D 283
           +
Sbjct: 483 E 483
Involved in the pyrimidine salvage pathway. The uracil phosphoribosyltransferase (UPRT) activity, that catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate, is unsure.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: 9
>sp|Q9LK34|UKL2_ARATH Uridine kinase-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=UKL2 PE=1 SV=1 Back     alignment and function description
>sp|Q8VYB2|UKL3_ARATH Uridine kinase-like protein 3 OS=Arabidopsis thaliana GN=UKL3 PE=1 SV=1 Back     alignment and function description
>sp|O65583|UKL4_ARATH Uridine kinase-like protein 4 OS=Arabidopsis thaliana GN=UKL4 PE=1 SV=2 Back     alignment and function description
>sp|Q9LTY6|UKL5_ARATH Uridine kinase-like protein 5 OS=Arabidopsis thaliana GN=UKL5 PE=2 SV=1 Back     alignment and function description
>sp|Q91YL3|UCKL1_MOUSE Uridine-cytidine kinase-like 1 OS=Mus musculus GN=Uckl1 PE=1 SV=1 Back     alignment and function description
>sp|Q9NWZ5|UCKL1_HUMAN Uridine-cytidine kinase-like 1 OS=Homo sapiens GN=UCKL1 PE=1 SV=2 Back     alignment and function description
>sp|Q55EL3|UCKA_DICDI Uridine-cytidine kinase A OS=Dictyostelium discoideum GN=udkA PE=3 SV=1 Back     alignment and function description
>sp|Q55GQ6|UPP_DICDI Uracil phosphoribosyltransferase OS=Dictyostelium discoideum GN=uprt PE=3 SV=1 Back     alignment and function description
>sp|Q26998|UPP_TOXGO Uracil phosphoribosyltransferase OS=Toxoplasma gondii GN=uprt PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query283
224055715 481 predicted protein [Populus trichocarpa] 1.0 0.588 0.906 1e-154
356558725 474 PREDICTED: uridine kinase-like protein 1 1.0 0.597 0.897 1e-153
224129080 477 predicted protein [Populus trichocarpa] 1.0 0.593 0.897 1e-153
359488603 482 PREDICTED: uridine kinase-like protein 1 1.0 0.587 0.903 1e-153
359488605 481 PREDICTED: uridine kinase-like protein 1 1.0 0.588 0.903 1e-153
356571511 476 PREDICTED: uridine kinase-like protein 1 1.0 0.594 0.893 1e-152
297805570 489 ATUK/UPRT1 [Arabidopsis lyrata subsp. ly 1.0 0.578 0.883 1e-152
15237512 486 putative uracil phosphoribosyltransferas 1.0 0.582 0.880 1e-151
255536937 481 Uracil phosphoribosyltransferase, putati 1.0 0.588 0.887 1e-151
15232108 483 putative uracil phosphoribosyltransferas 1.0 0.585 0.870 1e-149
>gi|224055715|ref|XP_002298617.1| predicted protein [Populus trichocarpa] gi|222845875|gb|EEE83422.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 273/301 (90%), Positives = 281/301 (93%), Gaps = 18/301 (5%)

Query: 1   MNMKIFVDTDADVRLARRIRRDTVERGRDVDSVLEQYA------------------DVII 42
           MNMKIFVDTDADVRLARRIRRDTVERGRD++SVLEQYA                  DVII
Sbjct: 181 MNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVII 240

Query: 43  PRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFV 102
           PRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNV+VIQSTFQIRGMHTLIRD+ ISKHDFV
Sbjct: 241 PRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVHVIQSTFQIRGMHTLIRDKEISKHDFV 300

Query: 103 FYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRA 162
           FYSDRLIRLVVEHGLGHLPFTEKQVVTPTGS+YTGVDFCKKLCGVSIVRSGESMENALRA
Sbjct: 301 FYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRA 360

Query: 163 CCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKG 222
           CCKGIKIGKILIHRDGDNGKQLIYEKLP DISERHVLLLDPVLATGNSANQAI+LLI+KG
Sbjct: 361 CCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKG 420

Query: 223 VPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 282
           VPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPG+GEFGDRYFGTD
Sbjct: 421 VPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGMGEFGDRYFGTD 480

Query: 283 D 283
           D
Sbjct: 481 D 481

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356558725|ref|XP_003547653.1| PREDICTED: uridine kinase-like protein 1, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|224129080|ref|XP_002328885.1| predicted protein [Populus trichocarpa] gi|222839315|gb|EEE77652.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359488603|ref|XP_003633787.1| PREDICTED: uridine kinase-like protein 1, chloroplastic-like isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359488605|ref|XP_003633788.1| PREDICTED: uridine kinase-like protein 1, chloroplastic-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356571511|ref|XP_003553920.1| PREDICTED: uridine kinase-like protein 1, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|297805570|ref|XP_002870669.1| ATUK/UPRT1 [Arabidopsis lyrata subsp. lyrata] gi|297316505|gb|EFH46928.1| ATUK/UPRT1 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15237512|ref|NP_198903.1| putative uracil phosphoribosyltransferase [Arabidopsis thaliana] gi|75333998|sp|Q9FKS0.1|UKL1_ARATH RecName: Full=Uridine kinase-like protein 1, chloroplastic; Includes: RecName: Full=Uridine kinase; Short=UK; Includes: RecName: Full=Putative uracil phosphoribosyltransferase; Short=UPRTase; AltName: Full=UMP pyrophosphorylase; Flags: Precursor gi|10177966|dbj|BAB11349.1| uridine kinase-like protein [Arabidopsis thaliana] gi|26983834|gb|AAN86169.1| putative uridine kinase [Arabidopsis thaliana] gi|29465725|gb|AAM10488.1| uracil phosphoribosyltransferase [Arabidopsis thaliana] gi|332007227|gb|AED94610.1| putative uracil phosphoribosyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255536937|ref|XP_002509535.1| Uracil phosphoribosyltransferase, putative [Ricinus communis] gi|223549434|gb|EEF50922.1| Uracil phosphoribosyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|15232108|ref|NP_189355.1| putative uracil phosphoribosyltransferase [Arabidopsis thaliana] gi|75335099|sp|Q9LK34.1|UKL2_ARATH RecName: Full=Uridine kinase-like protein 2, chloroplastic; Includes: RecName: Full=Uridine kinase; Short=UK; Includes: RecName: Full=Putative uracil phosphoribosyltransferase; Short=UPRTase; AltName: Full=UMP pyrophosphorylase; Flags: Precursor gi|9294212|dbj|BAB02114.1| uridine kinase-like protein [Arabidopsis thaliana] gi|38564268|gb|AAR23713.1| At3g27190 [Arabidopsis thaliana] gi|51969226|dbj|BAD43305.1| putative uracil phosphoribosyltransferase [Arabidopsis thaliana] gi|332643756|gb|AEE77277.1| putative uracil phosphoribosyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query283
TAIR|locus:2164516486 UK/UPRT1 "AT5G40870" [Arabidop 0.893 0.520 0.874 1.2e-136
TAIR|locus:2086523483 UKL2 "AT3G27190" [Arabidopsis 0.893 0.523 0.858 1.7e-135
TAIR|locus:2012125466 UKL3 "AT1G55810" [Arabidopsis 0.879 0.534 0.823 3.8e-127
TAIR|locus:2131498469 UKL4 "AT4G26510" [Arabidopsis 0.879 0.530 0.811 1.3e-124
TAIR|locus:2086691465 UKL5 "AT3G27440" [Arabidopsis 0.876 0.533 0.754 3.7e-116
UNIPROTKB|E1BP85548 UCKL1 "Uridine kinase" [Bos ta 0.865 0.447 0.455 6.8e-69
MGI|MGI:1915806548 Uckl1 "uridine-cytidine kinase 0.865 0.447 0.451 2.9e-68
UNIPROTKB|Q9NWZ5548 UCKL1 "Uridine-cytidine kinase 0.865 0.447 0.451 3.7e-68
UNIPROTKB|F1NB19511 UCKL1 "Uridine kinase" [Gallus 0.865 0.479 0.451 9.8e-68
UNIPROTKB|F8WAC3548 UCKL1 "Uridine kinase" [Homo s 0.862 0.445 0.45 3.3e-67
TAIR|locus:2164516 UK/UPRT1 "AT5G40870" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1170 (416.9 bits), Expect = 1.2e-136, Sum P(2) = 1.2e-136
 Identities = 223/255 (87%), Positives = 238/255 (93%)

Query:    31 DSVL--EQYADVIIPRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMH 88
             D VL  ++YADVIIPRGGDNHVA+DLI QHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMH
Sbjct:   229 DFVLPSKKYADVIIPRGGDNHVAVDLITQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMH 288

Query:    89 TLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVS 148
             TLIR++ ISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTG++YTGVDFCKKLCGVS
Sbjct:   289 TLIREKDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGAVYTGVDFCKKLCGVS 348

Query:   149 IVRSGESMENALRAXXXXXXXXXXLIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATG 208
             I+RSGESMENALRA          LIHRDGDNGKQLIYEKLP+DISERHVLLLDPVLATG
Sbjct:   349 IIRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPHDISERHVLLLDPVLATG 408

Query:   209 NSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVI 268
             NSANQAI+LLI+KGVPE+HIIFLNLISAPEGIHCVCKRFP+LKIVTSEID  LN+EFRVI
Sbjct:   409 NSANQAIELLIQKGVPEAHIIFLNLISAPEGIHCVCKRFPALKIVTSEIDQCLNQEFRVI 468

Query:   269 PGLGEFGDRYFGTDD 283
             PGLGEFGDRYFGTD+
Sbjct:   469 PGLGEFGDRYFGTDE 483
GO:0004845 "uracil phosphoribosyltransferase activity" evidence=IGI;ISS;IDA
GO:0005524 "ATP binding" evidence=ISS
GO:0009058 "biosynthetic process" evidence=ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016301 "kinase activity" evidence=ISS
GO:0004849 "uridine kinase activity" evidence=IGI;IDA
GO:0005737 "cytoplasm" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0016310 "phosphorylation" evidence=IDA
GO:0044206 "UMP salvage" evidence=IDA
GO:2000904 "regulation of starch metabolic process" evidence=IMP
GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA
GO:0006094 "gluconeogenesis" evidence=RCA
GO:0007010 "cytoskeleton organization" evidence=RCA
GO:0009086 "methionine biosynthetic process" evidence=RCA
GO:0009616 "virus induced gene silencing" evidence=RCA
GO:0010050 "vegetative phase change" evidence=RCA
GO:0010498 "proteasomal protein catabolic process" evidence=RCA
TAIR|locus:2086523 UKL2 "AT3G27190" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012125 UKL3 "AT1G55810" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2131498 UKL4 "AT4G26510" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086691 UKL5 "AT3G27440" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E1BP85 UCKL1 "Uridine kinase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
MGI|MGI:1915806 Uckl1 "uridine-cytidine kinase 1-like 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NWZ5 UCKL1 "Uridine-cytidine kinase-like 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NB19 UCKL1 "Uridine kinase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F8WAC3 UCKL1 "Uridine kinase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FKS0UKL1_ARATH2, ., 4, ., 2, ., 90.88031.00.5823yesno
O13867UPP1_SCHPO2, ., 4, ., 2, ., 90.52150.73490.9497yesno
P18562UPP_YEAST2, ., 4, ., 2, ., 90.52630.73490.9629yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.4.2.90.914
3rd Layer2.4.20.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query283
COG0035210 COG0035, Upp, Uracil phosphoribosyltransferase [Nu 1e-63
TIGR01091207 TIGR01091, upp, uracil phosphoribosyltransferase 2e-38
PRK00129209 PRK00129, upp, uracil phosphoribosyltransferase; R 3e-35
cd02023198 cd02023, UMPK, Uridine monophosphate kinase (UMPK, 1e-31
PRK05480209 PRK05480, PRK05480, uridine/cytidine kinase; Provi 3e-28
TIGR00235207 TIGR00235, udk, uridine kinase 1e-22
COG0572218 COG0572, Udk, Uridine kinase [Nucleotide transport 7e-21
PLN02541244 PLN02541, PLN02541, uracil phosphoribosyltransfera 2e-20
pfam00485197 pfam00485, PRK, Phosphoribulokinase / Uridine kina 8e-12
cd06223130 cd06223, PRTases_typeI, Phosphoribosyl transferase 7e-11
PTZ00301210 PTZ00301, PTZ00301, uridine kinase; Provisional 2e-06
>gnl|CDD|223113 COG0035, Upp, Uracil phosphoribosyltransferase [Nucleotide transport and metabolism] Back     alignment and domain information 
 Score =  198 bits (506), Expect = 1e-63
 Identities = 85/211 (40%), Positives = 122/211 (57%), Gaps = 5/211 (2%)

Query: 74  NVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGS 133
           NVYVI     ++   T++RD+     +F    D + RL+       LP  + ++ TP G 
Sbjct: 3   NVYVIDHP-LVKHKLTILRDKNTGTKEFRELLDEIGRLLAYEATRDLPLEKVEIETPLGP 61

Query: 134 MYTGVDFC-KKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGK-QLIYEKLPN 191
              GV    KK+  V I+R+G  M   L       ++G I I+RD +  +  L YEKLP 
Sbjct: 62  T-EGVQIAGKKIVIVPILRAGLGMVEGLLKLIPSARVGHIGIYRDEETLEPVLYYEKLPE 120

Query: 192 DISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLK 251
           DI ER V++LDP+LATG SA  AI LL ++G P+ +I  ++L++APEGI  V K  P ++
Sbjct: 121 DIDERTVIVLDPMLATGGSAIAAIDLLKKRGGPK-NIKVVSLVAAPEGIKAVEKAHPDVE 179

Query: 252 IVTSEIDVALNEEFRVIPGLGEFGDRYFGTD 282
           I T+ ID  LNE+  ++PGLG+ GDR FGT 
Sbjct: 180 IYTAAIDEGLNEKGYIVPGLGDAGDRLFGTK 210

Length = 210
>gnl|CDD|130163 TIGR01091, upp, uracil phosphoribosyltransferase Back     alignment and domain information
>gnl|CDD|234653 PRK00129, upp, uracil phosphoribosyltransferase; Reviewed Back     alignment and domain information
>gnl|CDD|238981 cd02023, UMPK, Uridine monophosphate kinase (UMPK, EC 2 Back     alignment and domain information
>gnl|CDD|235492 PRK05480, PRK05480, uridine/cytidine kinase; Provisional Back     alignment and domain information
>gnl|CDD|232890 TIGR00235, udk, uridine kinase Back     alignment and domain information
>gnl|CDD|223645 COG0572, Udk, Uridine kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|215297 PLN02541, PLN02541, uracil phosphoribosyltransferase Back     alignment and domain information
>gnl|CDD|201257 pfam00485, PRK, Phosphoribulokinase / Uridine kinase family Back     alignment and domain information
>gnl|CDD|206754 cd06223, PRTases_typeI, Phosphoribosyl transferase (PRT)-type I domain Back     alignment and domain information
>gnl|CDD|140322 PTZ00301, PTZ00301, uridine kinase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 283
COG0035210 Upp Uracil phosphoribosyltransferase [Nucleotide t 100.0
PF14681207 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V 100.0
PLN02541244 uracil phosphoribosyltransferase 100.0
TIGR01091207 upp uracil phosphoribosyltransferase. that include 100.0
PRK00129209 upp uracil phosphoribosyltransferase; Reviewed 100.0
KOG4203473 consensus Armadillo/beta-Catenin/plakoglobin [Sign 100.0
KOG1017267 consensus Predicted uracil phosphoribosyltransfera 100.0
COG0572218 Udk Uridine kinase [Nucleotide transport and metab 99.53
PLN02369302 ribose-phosphate pyrophosphokinase 99.46
PTZ00301210 uridine kinase; Provisional 99.38
TIGR01203166 HGPRTase hypoxanthine phosphoribosyltransferase. S 99.37
PRK03092304 ribose-phosphate pyrophosphokinase; Provisional 99.28
PRK05205176 bifunctional pyrimidine regulatory protein PyrR ur 99.26
PRK01259309 ribose-phosphate pyrophosphokinase; Provisional 98.98
cd02029277 PRK_like Phosphoribulokinase-like (PRK-like) is a 98.97
PRK02812330 ribose-phosphate pyrophosphokinase; Provisional 98.96
PRK15423178 hypoxanthine phosphoribosyltransferase; Provisiona 98.94
COG2065179 PyrR Pyrimidine operon attenuation protein/uracil 98.94
PLN02318 656 phosphoribulokinase/uridine kinase 98.93
PRK06827382 phosphoribosylpyrophosphate synthetase; Provisiona 98.91
PRK09162181 hypoxanthine-guanine phosphoribosyltransferase; Pr 98.89
TIGR01251308 ribP_PPkin ribose-phosphate pyrophosphokinase. In 98.88
PTZ00271211 hypoxanthine-guanine phosphoribosyltransferase; Pr 98.87
PF00156125 Pribosyltran: Phosphoribosyl transferase domain; I 98.86
PRK00934285 ribose-phosphate pyrophosphokinase; Provisional 98.81
PTZ00149241 hypoxanthine phosphoribosyltransferase; Provisiona 98.8
PRK15453290 phosphoribulokinase; Provisional 98.79
PLN02238189 hypoxanthine phosphoribosyltransferase 98.77
PRK05480209 uridine/cytidine kinase; Provisional 98.76
cd02023198 UMPK Uridine monophosphate kinase (UMPK, EC 2.7.1. 98.7
COG1926220 Predicted phosphoribosyltransferases [General func 98.68
PRK04923319 ribose-phosphate pyrophosphokinase; Provisional 98.62
TIGR01090169 apt adenine phosphoribosyltransferase. A phylogene 98.61
COG0634178 Hpt Hypoxanthine-guanine phosphoribosyltransferase 98.61
TIGR00235207 udk uridine kinase. Model contains a number of lon 98.6
PRK02269320 ribose-phosphate pyrophosphokinase; Provisional 98.59
PRK02458323 ribose-phosphate pyrophosphokinase; Provisional 98.57
PRK07199301 phosphoribosylpyrophosphate synthetase; Provisiona 98.54
PRK02304175 adenine phosphoribosyltransferase; Provisional 98.53
COG0462314 PrsA Phosphoribosylpyrophosphate synthetase [Nucle 98.48
PF00485194 PRK: Phosphoribulokinase / Uridine kinase family; 98.48
PRK00553332 ribose-phosphate pyrophosphokinase; Provisional 98.42
PRK00455202 pyrE orotate phosphoribosyltransferase; Validated 98.37
PRK02277200 orotate phosphoribosyltransferase-like protein; Pr 98.33
TIGR00336173 pyrE orotate phosphoribosyltransferase. The conser 98.3
PLN02293187 adenine phosphoribosyltransferase 98.29
cd02028179 UMPK_like Uridine monophosphate kinase_like (UMPK_ 98.24
PF14572184 Pribosyl_synth: Phosphoribosyl synthetase-associat 98.23
TIGR01367187 pyrE_Therm orotate phosphoribosyltransferase, Ther 98.21
PTZ00145439 phosphoribosylpyrophosphate synthetase; Provisiona 98.16
PRK13811170 orotate phosphoribosyltransferase; Provisional 98.11
PRK07322178 adenine phosphoribosyltransferase; Provisional 98.09
PRK09177156 xanthine-guanine phosphoribosyltransferase; Valida 98.07
PLN02348395 phosphoribulokinase 98.05
PRK08558238 adenine phosphoribosyltransferase; Provisional 98.02
PRK13812176 orotate phosphoribosyltransferase; Provisional 97.99
PLN02297326 ribose-phosphate pyrophosphokinase 97.96
PRK06031233 phosphoribosyltransferase; Provisional 97.91
PRK05793469 amidophosphoribosyltransferase; Provisional 97.91
PRK12560187 adenine phosphoribosyltransferase; Provisional 97.81
COG2236192 Predicted phosphoribosyltransferases [General func 97.8
PRK08525445 amidophosphoribosyltransferase; Provisional 97.8
TIGR00201190 comF comF family protein. This protein is found in 97.74
COG1040225 ComFC Predicted amidophosphoribosyltransferases [G 97.74
cd02026273 PRK Phosphoribulokinase (PRK) is an enzyme involve 97.72
PRK13810187 orotate phosphoribosyltransferase; Provisional 97.71
COG0856203 Orotate phosphoribosyltransferase homologs [Nucleo 97.7
PRK13809206 orotate phosphoribosyltransferase; Provisional 97.7
PLN02440479 amidophosphoribosyltransferase 97.69
PRK07429327 phosphoribulokinase; Provisional 97.65
KOG1448316 consensus Ribose-phosphate pyrophosphokinase [Nucl 97.65
cd02025220 PanK Pantothenate kinase (PanK) catalyzes the phos 97.63
PRK11595227 DNA utilization protein GntX; Provisional 97.62
PRK09123479 amidophosphoribosyltransferase; Provisional 97.6
KOG3367216 consensus Hypoxanthine-guanine phosphoribosyltrans 97.58
COG0503179 Apt Adenine/guanine phosphoribosyltransferases and 97.55
TIGR01744191 XPRTase xanthine phosphoribosyltransferase. This m 97.54
PRK08341442 amidophosphoribosyltransferase; Provisional 97.52
COG0461201 PyrE Orotate phosphoribosyltransferase [Nucleotide 97.5
PRK09246501 amidophosphoribosyltransferase; Provisional 97.48
PRK09219189 xanthine phosphoribosyltransferase; Validated 97.42
TIGR01743268 purR_Bsub pur operon repressor, Bacillus subtilis 97.28
PRK07349500 amidophosphoribosyltransferase; Provisional 97.19
KOG1712183 consensus Adenine phosphoribosyl transferases [Nuc 97.15
PRK07272484 amidophosphoribosyltransferase; Provisional 97.07
PRK09213271 pur operon repressor; Provisional 97.01
TIGR01134442 purF amidophosphoribosyltransferase. Alternate nam 97.0
PRK07847510 amidophosphoribosyltransferase; Provisional 96.89
PRK07631475 amidophosphoribosyltransferase; Provisional 96.87
PRK06781471 amidophosphoribosyltransferase; Provisional 96.85
PRK06388474 amidophosphoribosyltransferase; Provisional 96.84
PRK05500477 bifunctional orotidine 5'-phosphate decarboxylase/ 96.79
TIGR00554290 panK_bact pantothenate kinase, bacterial type. Sho 96.4
PF15609191 PRTase_2: Phosphoribosyl transferase 96.37
PRK14732196 coaE dephospho-CoA kinase; Provisional 96.3
PRK08233182 hypothetical protein; Provisional 96.14
PRK14734200 coaE dephospho-CoA kinase; Provisional 96.14
PRK14730195 coaE dephospho-CoA kinase; Provisional 96.01
COG0034470 PurF Glutamine phosphoribosylpyrophosphate amidotr 95.6
KOG0572474 consensus Glutamine phosphoribosylpyrophosphate am 95.58
PRK03333395 coaE dephospho-CoA kinase/protein folding accessor 94.45
PRK06696223 uridine kinase; Validated 94.16
PRK01184184 hypothetical protein; Provisional 93.53
PRK05439311 pantothenate kinase; Provisional 93.44
PLN02422232 dephospho-CoA kinase 93.31
PRK14731208 coaE dephospho-CoA kinase; Provisional 93.18
PTZ00451244 dephospho-CoA kinase; Provisional 92.81
PRK14733204 coaE dephospho-CoA kinase; Provisional 91.94
PRK09270229 nucleoside triphosphate hydrolase domain-containin 91.92
PRK00081194 coaE dephospho-CoA kinase; Reviewed 91.8
cd02020147 CMPK Cytidine monophosphate kinase (CMPK) catalyze 90.71
PRK13477512 bifunctional pantoate ligase/cytidylate kinase; Pr 90.27
PRK04182180 cytidylate kinase; Provisional 89.89
TIGR02173171 cyt_kin_arch cytidylate kinase, putative. Proteins 89.66
PRK07261171 topology modulation protein; Provisional 88.41
KOG1503354 consensus Phosphoribosylpyrophosphate synthetase-a 87.08
PRK00023225 cmk cytidylate kinase; Provisional 86.9
COG0237201 CoaE Dephospho-CoA kinase [Coenzyme metabolism] 86.58
PRK09518 712 bifunctional cytidylate kinase/GTPase Der; Reviewe 85.3
PRK06762166 hypothetical protein; Provisional 85.11
COG1102179 Cmk Cytidylate kinase [Nucleotide transport and me 82.9
PF01488135 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; 81.97
TIGR00017217 cmk cytidylate kinase. This family consists of cyt 81.31
TIGR00152188 dephospho-CoA kinase. This model produces scores i 80.89
PRK11860661 bifunctional 3-phosphoshikimate 1-carboxyvinyltran 80.86
>COG0035 Upp Uracil phosphoribosyltransferase [Nucleotide transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=3.4e-70  Score=476.60  Aligned_cols=207  Identities=41%  Similarity=0.625  Sum_probs=200.0

Q ss_pred             CceeeecCchHHHHHhHhhhcCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeec-cceeEEEecc
Q 023344           73 PNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSIVR  151 (283)
Q Consensus        73 ~~v~vl~~~~~l~~llt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~-~~i~~V~IlR  151 (283)
                      .++++++|| +++|++|+|||++|++.+||++++||+++|+|||++++|+++.+|+||++ +++|..+. +++|+|||||
T Consensus         2 ~~v~vi~hp-li~~~lt~lRdk~t~~~~Fr~~~~ei~~lL~yEa~~~l~~e~~~ieTP~~-~~~~~~~~~~~i~~V~ILR   79 (210)
T COG0035           2 MNVYVIDHP-LVKHKLTILRDKNTGTKEFRELLDEIGRLLAYEATRDLPLEKVEIETPLG-PTEGVQIAGKKIVIVPILR   79 (210)
T ss_pred             CceEEeCcH-HHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhCcCceeEEEEECCCc-ceeeeeecCCcEEEEEEee
Confidence            578999996 79999999999999999999999999999999999999999999999999 58888886 4599999999


Q ss_pred             cchHHHHHHHHhccCceeeeEEEEecCCCC-ceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEEE
Q 023344          152 SGESMENALRACCKGIKIGKILIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIF  230 (283)
Q Consensus       152 aG~~m~~~l~~~~p~a~~G~i~i~R~~~t~-~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~~  230 (283)
                      ||++|.+|+.+++|+|++|||+++||++|+ |..||.|||++++++.|+++|||+|||+|+++|++.|+++| .+++|++
T Consensus        80 AGl~m~~gl~~~~P~a~vG~ig~~Rdeet~~p~~yy~KLP~~~~~~~viv~DPMLATG~s~i~ai~~L~~~G-~~~~I~~  158 (210)
T COG0035          80 AGLGMVEGLLKLIPSARVGHIGIYRDEETLEPVLYYEKLPEDIDERTVIVLDPMLATGGSAIAAIDLLKKRG-GPKNIKV  158 (210)
T ss_pred             ccccHHHHHHHhCCcceEEEEEEEecCccCceehhHHhCCCcccCCeEEEECchhhccHhHHHHHHHHHHhC-CCceEEE
Confidence            999999999999999999999999999998 89999999999999999999999999999999999999997 6699999


Q ss_pred             EEEeeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccCCC
Q 023344          231 LNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD  282 (283)
Q Consensus       231 v~~vas~~gl~~l~~~~P~v~I~ta~iD~~ln~~~~ivPGlGd~GdR~fgt~  282 (283)
                      +|++|+|+|++++.++||+|+||||+||++||++|||+|||||||||||||+
T Consensus       159 v~~vAapeGi~~v~~~~p~v~I~ta~iD~~Lne~gYIvPGLGDaGDR~fGt~  210 (210)
T COG0035         159 VSLVAAPEGIKAVEKAHPDVEIYTAAIDEGLNEKGYIVPGLGDAGDRLFGTK  210 (210)
T ss_pred             EEEEecHHHHHHHHHhCCCCeEEEEEeccccccCCCCccCCCcccccccCCC
Confidence            9999999999999999999999999999999999999999999999999996

>PF14681 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V9S_B 1UPF_A 1UPU_D 1JLR_B 1BD4_A 1BD3_C 1JLS_D 1XTV_C 1XTU_H 3G6W_C Back     alignment and domain information
>PLN02541 uracil phosphoribosyltransferase Back     alignment and domain information
>TIGR01091 upp uracil phosphoribosyltransferase Back     alignment and domain information
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed Back     alignment and domain information
>KOG4203 consensus Armadillo/beta-Catenin/plakoglobin [Signal transduction mechanisms; Cytoskeleton] Back     alignment and domain information
>KOG1017 consensus Predicted uracil phosphoribosyltransferase [General function prediction only] Back     alignment and domain information
>COG0572 Udk Uridine kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>PLN02369 ribose-phosphate pyrophosphokinase Back     alignment and domain information
>PTZ00301 uridine kinase; Provisional Back     alignment and domain information
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase Back     alignment and domain information
>PRK03092 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK05205 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK01259 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>cd02029 PRK_like Phosphoribulokinase-like (PRK-like) is a family of proteins similar to phosphoribulokinase (PRK), the enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes Back     alignment and domain information
>PRK02812 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK15423 hypoxanthine phosphoribosyltransferase; Provisional Back     alignment and domain information
>COG2065 PyrR Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>PLN02318 phosphoribulokinase/uridine kinase Back     alignment and domain information
>PRK06827 phosphoribosylpyrophosphate synthetase; Provisional Back     alignment and domain information
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional Back     alignment and domain information
>TIGR01251 ribP_PPkin ribose-phosphate pyrophosphokinase Back     alignment and domain information
>PTZ00271 hypoxanthine-guanine phosphoribosyltransferase; Provisional Back     alignment and domain information
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate Back     alignment and domain information
>PRK00934 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PTZ00149 hypoxanthine phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK15453 phosphoribulokinase; Provisional Back     alignment and domain information
>PLN02238 hypoxanthine phosphoribosyltransferase Back     alignment and domain information
>PRK05480 uridine/cytidine kinase; Provisional Back     alignment and domain information
>cd02023 UMPK Uridine monophosphate kinase (UMPK, EC 2 Back     alignment and domain information
>COG1926 Predicted phosphoribosyltransferases [General function prediction only] Back     alignment and domain information
>PRK04923 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>TIGR01090 apt adenine phosphoribosyltransferase Back     alignment and domain information
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR00235 udk uridine kinase Back     alignment and domain information
>PRK02269 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK02458 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK07199 phosphoribosylpyrophosphate synthetase; Provisional Back     alignment and domain information
>PRK02304 adenine phosphoribosyltransferase; Provisional Back     alignment and domain information
>COG0462 PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism] Back     alignment and domain information
>PF00485 PRK: Phosphoribulokinase / Uridine kinase family; InterPro: IPR006083 Phosphoribulokinase (PRK) 2 Back     alignment and domain information
>PRK00553 ribose-phosphate pyrophosphokinase; Provisional Back     alignment and domain information
>PRK00455 pyrE orotate phosphoribosyltransferase; Validated Back     alignment and domain information
>PRK02277 orotate phosphoribosyltransferase-like protein; Provisional Back     alignment and domain information
>TIGR00336 pyrE orotate phosphoribosyltransferase Back     alignment and domain information
>PLN02293 adenine phosphoribosyltransferase Back     alignment and domain information
>cd02028 UMPK_like Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2 Back     alignment and domain information
>PF14572 Pribosyl_synth: Phosphoribosyl synthetase-associated domain; PDB: 2H07_B 2H06_B 3S5J_B 2HCR_A 3EFH_A 2H08_A 1DKR_B 1DKU_B 1IBS_B 2JI4_A Back     alignment and domain information
>TIGR01367 pyrE_Therm orotate phosphoribosyltransferase, Thermus family Back     alignment and domain information
>PTZ00145 phosphoribosylpyrophosphate synthetase; Provisional Back     alignment and domain information
>PRK13811 orotate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07322 adenine phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated Back     alignment and domain information
>PLN02348 phosphoribulokinase Back     alignment and domain information
>PRK08558 adenine phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK13812 orotate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PLN02297 ribose-phosphate pyrophosphokinase Back     alignment and domain information
>PRK06031 phosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK05793 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK12560 adenine phosphoribosyltransferase; Provisional Back     alignment and domain information
>COG2236 Predicted phosphoribosyltransferases [General function prediction only] Back     alignment and domain information
>PRK08525 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>TIGR00201 comF comF family protein Back     alignment and domain information
>COG1040 ComFC Predicted amidophosphoribosyltransferases [General function prediction only] Back     alignment and domain information
>cd02026 PRK Phosphoribulokinase (PRK) is an enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes Back     alignment and domain information
>PRK13810 orotate phosphoribosyltransferase; Provisional Back     alignment and domain information
>COG0856 Orotate phosphoribosyltransferase homologs [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK13809 orotate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PLN02440 amidophosphoribosyltransferase Back     alignment and domain information
>PRK07429 phosphoribulokinase; Provisional Back     alignment and domain information
>KOG1448 consensus Ribose-phosphate pyrophosphokinase [Nucleotide transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>cd02025 PanK Pantothenate kinase (PanK) catalyzes the phosphorylation of pantothenic acid to form 4'-phosphopantothenic, which is the first of five steps in coenzyme A (CoA) biosynthetic pathway Back     alignment and domain information
>PRK11595 DNA utilization protein GntX; Provisional Back     alignment and domain information
>PRK09123 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>KOG3367 consensus Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR01744 XPRTase xanthine phosphoribosyltransferase Back     alignment and domain information
>PRK08341 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>COG0461 PyrE Orotate phosphoribosyltransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK09246 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK09219 xanthine phosphoribosyltransferase; Validated Back     alignment and domain information
>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type Back     alignment and domain information
>PRK07349 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>KOG1712 consensus Adenine phosphoribosyl transferases [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK07272 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK09213 pur operon repressor; Provisional Back     alignment and domain information
>TIGR01134 purF amidophosphoribosyltransferase Back     alignment and domain information
>PRK07847 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK07631 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK06781 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK06388 amidophosphoribosyltransferase; Provisional Back     alignment and domain information
>PRK05500 bifunctional orotidine 5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein; Validated Back     alignment and domain information
>TIGR00554 panK_bact pantothenate kinase, bacterial type Back     alignment and domain information
>PF15609 PRTase_2: Phosphoribosyl transferase Back     alignment and domain information
>PRK14732 coaE dephospho-CoA kinase; Provisional Back     alignment and domain information
>PRK08233 hypothetical protein; Provisional Back     alignment and domain information
>PRK14734 coaE dephospho-CoA kinase; Provisional Back     alignment and domain information
>PRK14730 coaE dephospho-CoA kinase; Provisional Back     alignment and domain information
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0572 consensus Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK03333 coaE dephospho-CoA kinase/protein folding accessory domain-containing protein; Provisional Back     alignment and domain information
>PRK06696 uridine kinase; Validated Back     alignment and domain information
>PRK01184 hypothetical protein; Provisional Back     alignment and domain information
>PRK05439 pantothenate kinase; Provisional Back     alignment and domain information
>PLN02422 dephospho-CoA kinase Back     alignment and domain information
>PRK14731 coaE dephospho-CoA kinase; Provisional Back     alignment and domain information
>PTZ00451 dephospho-CoA kinase; Provisional Back     alignment and domain information
>PRK14733 coaE dephospho-CoA kinase; Provisional Back     alignment and domain information
>PRK09270 nucleoside triphosphate hydrolase domain-containing protein; Reviewed Back     alignment and domain information
>PRK00081 coaE dephospho-CoA kinase; Reviewed Back     alignment and domain information
>cd02020 CMPK Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor Back     alignment and domain information
>PRK13477 bifunctional pantoate ligase/cytidylate kinase; Provisional Back     alignment and domain information
>PRK04182 cytidylate kinase; Provisional Back     alignment and domain information
>TIGR02173 cyt_kin_arch cytidylate kinase, putative Back     alignment and domain information
>PRK07261 topology modulation protein; Provisional Back     alignment and domain information
>KOG1503 consensus Phosphoribosylpyrophosphate synthetase-associated protein [Amino acid transport and metabolism; Nucleotide transport and metabolism] Back     alignment and domain information
>PRK00023 cmk cytidylate kinase; Provisional Back     alignment and domain information
>COG0237 CoaE Dephospho-CoA kinase [Coenzyme metabolism] Back     alignment and domain information
>PRK09518 bifunctional cytidylate kinase/GTPase Der; Reviewed Back     alignment and domain information
>PRK06762 hypothetical protein; Provisional Back     alignment and domain information
>COG1102 Cmk Cytidylate kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases Back     alignment and domain information
>TIGR00017 cmk cytidylate kinase Back     alignment and domain information
>TIGR00152 dephospho-CoA kinase Back     alignment and domain information
>PRK11860 bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query283
1upu_D224 Structure Of The Uracil Phosphoribosyltransferase, 8e-61
1bd3_D243 Structure Of The Apo Uracil Phosphoribosyltransfera 9e-61
3dmp_A217 2.6 A Crystal Structure Of Uracil Phosphoribosyltra 1e-22
1i5e_A209 Crystal Structure Of Bacillus Caldolyticus Uracil P 1e-22
1v9s_A208 Crystal Structure Of Tt0130 Protein From Thermus Th 2e-21
1o5o_A221 Crystal Structure Of Uracil Phosphoribosyltransfera 5e-19
2ehj_A208 Structure Of Uracil Phosphoribosyl Transferase Leng 3e-17
1xrj_A261 Rapid Structure Determination Of Human Uridine-Cyti 8e-16
1udw_A252 Crystal Structure Of Human Uridine-cytidine Kinase 9e-16
2jeo_A245 Crystal Structure Of Human Uridine-Cytidine Kinase 6e-14
3asy_A211 Ligand-Free Structure Of Uridine Kinase From Thermu 2e-10
2e55_A208 Structure Of Aq2163 Protein From Aquifex Aeolicus L 2e-10
1xtt_A216 Sulfolobus Solfataricus Uracil Phosphoribosyltransf 3e-09
>pdb|1UPU|D Chain D, Structure Of The Uracil Phosphoribosyltransferase, Mutant C128v, Bound To Product Uridine-1-Monophosphate (Ump) Length = 224 Back     alignment and structure 
Iteration: 1

 Score =  230 bits (586), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 108/217 (49%), Positives = 150/217 (69%), Gaps = 1/217 (0%)
Query: 66  HDLCKIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEK 125
            D+   +PNV +++ T Q+R M T+IRD+   K +FVFY+DRLIRL++E  L  LPF +K
Sbjct: 7   QDIITRFPNVVLMKQTAQLRAMMTIIRDKETPKEEFVFYADRLIRLLIEEALNELPFQKK 66
Query: 126 QVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRAXXXXXXXXXXLIHRDGDNGK-QL 184
           +V TP    Y GV F  K+CGVSIVR+GESME+ LRA          LI RD    + +L
Sbjct: 67  EVTTPLDVSYHGVSFYSKICGVSIVRAGESMESGLRAVCRGVRIGKILIQRDETTAEPKL 126
Query: 185 IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVC 244
           IYEKLP DI ER V+LLDP+ AT  S  +AI++L+  GV E  IIF+N+++AP+GI  V 
Sbjct: 127 IYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKEERIIFVNILAAPQGIERVF 186
Query: 245 KRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 281
           K +P +++VT+ +D+ LN  + ++PG+G+FGDRYFGT
Sbjct: 187 KEYPKVRMVTAAVDICLNSRYYIVPGIGDFGDRYFGT 223
>pdb|1BD3|D Chain D, Structure Of The Apo Uracil Phosphoribosyltransferase, 2 Mutant C128v Length = 243 Back     alignment and structure
>pdb|3DMP|A Chain A, 2.6 A Crystal Structure Of Uracil Phosphoribosyltransferase From Burkholderia Pseudomallei Length = 217 Back     alignment and structure
>pdb|1I5E|A Chain A, Crystal Structure Of Bacillus Caldolyticus Uracil Phosphoribosyltransferase With Bound Ump Length = 209 Back     alignment and structure
>pdb|1V9S|A Chain A, Crystal Structure Of Tt0130 Protein From Thermus Thermophilus Hb8 Length = 208 Back     alignment and structure
>pdb|1O5O|A Chain A, Crystal Structure Of Uracil Phosphoribosyltransferase (Tm0721) From Thermotoga Maritima At 2.30 A Resolution Length = 221 Back     alignment and structure
>pdb|2EHJ|A Chain A, Structure Of Uracil Phosphoribosyl Transferase Length = 208 Back     alignment and structure
>pdb|1XRJ|A Chain A, Rapid Structure Determination Of Human Uridine-Cytidine Kinase 2 Using A Conventional Laboratory X-Ray Source And A Single Samarium Derivative Length = 261 Back     alignment and structure
>pdb|1UDW|A Chain A, Crystal Structure Of Human Uridine-cytidine Kinase 2 Complexed With A Feedback-inhibitor, Ctp Length = 252 Back     alignment and structure
>pdb|2JEO|A Chain A, Crystal Structure Of Human Uridine-Cytidine Kinase 1 Length = 245 Back     alignment and structure
>pdb|3ASY|A Chain A, Ligand-Free Structure Of Uridine Kinase From Thermus Thermophilus Hb8 Length = 211 Back     alignment and structure
>pdb|2E55|A Chain A, Structure Of Aq2163 Protein From Aquifex Aeolicus Length = 208 Back     alignment and structure
>pdb|1XTT|A Chain A, Sulfolobus Solfataricus Uracil Phosphoribosyltransferase In Complex With Uridine 5'-Monophosphate (Ump) Length = 216 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query283
1bd3_D243 Uprtase, uracil phosphoribosyltransferase; glycosy 2e-86
3dmp_A217 Uracil phosphoribosyltransferase; structural genom 1e-79
1o5o_A221 Uracil phosphoribosyltransferase; TM0721, structur 2e-71
1i5e_A209 Uracil phosphoribosyltransferase; salvage pathway; 2e-71
1v9s_A208 Uracil phosphoribosyltransferase; pyrimidine salva 6e-71
2e55_A208 Uracil phosphoribosyltransferase; structural genom 1e-70
2ehj_A208 Uracil phosphoribosyltransferase; structural genom 5e-65
1xtt_A216 Probable uracil phosphoribosyltransferase; tetrame 5e-61
3asz_A211 Uridine kinase; cytidine phosphorylation, transfer 1e-28
2jeo_A245 Uridine-cytidine kinase 1; UCK, transferase, ATP-b 3e-26
1uj2_A252 Uridine-cytidine kinase 2; alpha/beta mononucleoti 1e-24
1a7j_A290 Phosphoribulokinase; transferase, calvin cycle; 2. 2e-13
1rz3_A201 Hypothetical protein rbstp0775; MCSG, structural g 5e-10
3aez_A312 Pantothenate kinase; transferase, homodimer, COA b 2e-08
3c8u_A208 Fructokinase; YP_612366.1, putative fructose trans 2e-08
1sq5_A308 Pantothenate kinase; P-loop, transferase; HET: PAU 2e-07
2qt1_A207 Nicotinamide riboside kinase 1; non-protein kinase 1e-05
3tqc_A321 Pantothenate kinase; biosynthesis of cofactors, pr 3e-04
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D* Length = 243 Back     alignment and structure
 Score =  257 bits (657), Expect = 2e-86
 Identities = 117/244 (47%), Positives = 166/244 (68%), Gaps = 11/244 (4%)

Query: 39  DVIIPRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDRGISK 98
            ++ PR   N     ++           D+   +PNV +++ T Q+R M T+IRD+   K
Sbjct: 9   LLVDPRYSTNDQEESIL----------QDIITRFPNVVLMKQTAQLRAMMTIIRDKETPK 58

Query: 99  HDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCGVSIVRSGESMEN 158
            +FVFY+DRLIRL++E  L  LPF +K+V TP    Y GV F  K+CGVSIVR+GESME+
Sbjct: 59  EEFVFYADRLIRLLIEEALNELPFQKKEVTTPLDVSYHGVSFYSKICGVSIVRAGESMES 118

Query: 159 ALRACCKGIKIGKILIHRDGDNGK-QLIYEKLPNDISERHVLLLDPVLATGNSANQAIQL 217
            LRA C+G++IGKILI RD    + +LIYEKLP DI ER V+LLDP+ AT  S  +AI++
Sbjct: 119 GLRAVCRGVRIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEV 178

Query: 218 LIEKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDR 277
           L+  GV E  IIF+N+++AP+GI  V K +P +++VT+ +D+ LN  + ++PG+G+FGDR
Sbjct: 179 LLRLGVKEERIIFVNILAAPQGIERVFKEYPKVRMVTAAVDICLNSRYYIVPGIGDFGDR 238

Query: 278 YFGT 281
           YFGT
Sbjct: 239 YFGT 242
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} Length = 217 Back     alignment and structure
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1 Length = 221 Back     alignment and structure
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1 Length = 209 Back     alignment and structure
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1 Length = 208 Back     alignment and structure
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus} Length = 208 Back     alignment and structure
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli} Length = 208 Back     alignment and structure
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A* Length = 216 Back     alignment and structure
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A* Length = 211 Back     alignment and structure
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A* Length = 245 Back     alignment and structure
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A* Length = 252 Back     alignment and structure
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6 Length = 290 Back     alignment and structure
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6 Length = 201 Back     alignment and structure
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A* Length = 312 Back     alignment and structure
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP} Length = 208 Back     alignment and structure
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A* Length = 308 Back     alignment and structure
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A* Length = 207 Back     alignment and structure
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii} Length = 321 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query283
3dmp_A217 Uracil phosphoribosyltransferase; structural genom 100.0
1bd3_D243 Uprtase, uracil phosphoribosyltransferase; glycosy 100.0
1xtt_A216 Probable uracil phosphoribosyltransferase; tetrame 100.0
2ehj_A208 Uracil phosphoribosyltransferase; structural genom 100.0
1v9s_A208 Uracil phosphoribosyltransferase; pyrimidine salva 100.0
1o5o_A221 Uracil phosphoribosyltransferase; TM0721, structur 100.0
2e55_A208 Uracil phosphoribosyltransferase; structural genom 100.0
1i5e_A209 Uracil phosphoribosyltransferase; salvage pathway; 100.0
3hvu_A204 Hypoxanthine phosphoribosyltransferase; hypoxanthi 99.26
3o7m_A186 Hypoxanthine phosphoribosyltransferase; hypoxanthi 99.26
3ohp_A177 Hypoxanthine phosphoribosyltransferase; structural 99.26
2ywu_A181 Hypoxanthine-guanine phosphoribosyltransferase; ro 99.25
1wd5_A208 Hypothetical protein TT1426; structural genomics, 99.18
2geb_A185 Hypoxanthine-guanine phosphoribosyltransferase; HG 99.16
3ozf_A250 Hypoxanthine-guanine-xanthine phosphoribosyltrans; 99.14
1z7g_A217 HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribos 99.12
1yfz_A205 Hypoxanthine-guanine phosphoribosyltransferase; pr 99.06
1tc1_A220 Protein (hypoxanthine phosphoribosyltransferase); 99.05
1hgx_A183 HGXPRTASE, hypoxanthine-guanine-xanthine phosphori 99.04
2jbh_A225 Phosphoribosyltransferase domain-containing prote; 99.04
1vdm_A153 Purine phosphoribosyltransferase; structural genom 99.03
1dku_A317 Protein (phosphoribosyl pyrophosphate synthetase); 99.03
1pzm_A211 HGPRT, hypoxanthine-guanine phosphoribosyltransfer 99.0
1fsg_A233 HGPRTASE, hypoxanthine-guanine phosphoribosyltrans 98.96
1w30_A201 PYRR bifunctional protein; transferase, glycosyltr 98.93
1u9y_A284 RPPK;, ribose-phosphate pyrophosphokinase; PRPP sy 98.9
2aee_A211 OPRT, oprtase, orotate phosphoribosyltransferase; 98.89
1a3c_A181 PYRR, pyrimidine operon regulatory protein PYRR; t 98.87
1ufr_A181 TT1027, PYR mRNA-binding attenuation protein; pyri 98.87
3s5j_B326 Ribose-phosphate pyrophosphokinase 1; nucleotide s 98.86
3dah_A319 Ribose-phosphate pyrophosphokinase; pyrophosphoki 98.83
3acd_A181 Hypoxanthine-guanine phosphoribosyltransferase; ro 98.81
2ji4_A379 Phosphoribosyl pyrophosphate synthetase-associated 98.7
2xbu_A221 Hypoxanthine-guanine phosphoribosyltransferase; gl 98.62
3lrt_A286 Ribose-phosphate pyrophosphokinase; phosphoribosyl 98.59
1y0b_A197 Xanthine phosphoribosyltransferase; purine metabol 98.53
1zn8_A180 APRT, adenine phosphoribosyltransferase; glycosylt 98.5
2dy0_A190 APRT, adenine phosphoribosyltransferase; structura 98.46
1l1q_A186 Adenine phosphoribosyltransferase; aprtase, giardi 98.42
1g2q_A187 Adenine phosphoribosyltransferase 1; dimer, single 98.38
2p1z_A180 Phosphoribosyltransferase; STRU genomics, PSI-2, p 98.38
3asz_A211 Uridine kinase; cytidine phosphorylation, transfer 98.38
1dqn_A230 Guanine phosphoribosyltransferase; protein-inhibit 98.35
2yzk_A178 OPRT, oprtase, orotate phosphoribosyltransferase; 98.35
1qb7_A236 APRT, adenine phosphoribosyltransferase; dinucleot 98.33
1vch_A175 Phosphoribosyltransferase-related protein; structu 98.24
2wns_A205 Orotate phosphoribosyltransferase; alternative spl 98.24
3m3h_A234 OPRT, oprtase, orotate phosphoribosyltransferase; 98.2
3dez_A243 OPRT, oprtase, orotate phosphoribosyltransferase; 98.2
2jeo_A245 Uridine-cytidine kinase 1; UCK, transferase, ATP-b 98.19
2ps1_A226 Orotate phosphoribosyltransferase 1; alpha beta, o 98.17
1nul_A152 XPRT, xanthine-guanine phosphoribosyltransferase; 98.11
3mjd_A232 Orotate phosphoribosyltransferase; IDP02311, csgid 98.08
3n2l_A238 OPRT, oprtase, orotate phosphoribosyltransferase; 98.07
1lh0_A213 OMP synthase; loop closure, monomer closure, orota 97.9
1o57_A291 PUR operon repressor; purine operon repressor, hel 97.88
1ecf_A504 Glutamine phosphoribosylpyrophosphate amidotransf; 97.76
1ao0_A459 Glutamine phosphoribosylpyrophosphate amidotransfe 97.67
1a7j_A290 Phosphoribulokinase; transferase, calvin cycle; 2. 97.64
1uj2_A252 Uridine-cytidine kinase 2; alpha/beta mononucleoti 97.6
3qw4_B453 UMP synthase; N-terminal orotidine monophosphate d 97.23
1jjv_A206 Dephospho-COA kinase; P-loop nucleotide-binding fo 97.12
2f6r_A281 COA synthase, bifunctional coenzyme A synthase; 18 96.69
4i1u_A210 Dephospho-COA kinase; structural genomics, niaid, 96.63
3tqc_A321 Pantothenate kinase; biosynthesis of cofactors, pr 96.32
3lw7_A179 Adenylate kinase related protein (ADKA-like); AMP, 96.31
1q3t_A236 Cytidylate kinase; nucleotide monophosphate kinase 95.66
3c8u_A208 Fructokinase; YP_612366.1, putative fructose trans 95.45
2if2_A204 Dephospho-COA kinase; alpha-beta protein, structur 95.35
2ga8_A359 Hypothetical 39.9 kDa protein; YFR007W, YFH7, unkn 95.23
1uf9_A203 TT1252 protein; P-loop, nucleotide binding domain, 95.12
1vht_A218 Dephospho-COA kinase; structural genomics, transfe 95.12
1odf_A290 YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser 94.96
4e22_A252 Cytidylate kinase; P-loop, CMP/ATP binding, transf 94.71
1cke_A227 CK, MSSA, protein (cytidine monophosphate kinase); 94.64
1sq5_A308 Pantothenate kinase; P-loop, transferase; HET: PAU 93.97
2h92_A219 Cytidylate kinase; rossmann fold, transferase; HET 93.86
3ake_A208 Cytidylate kinase; CMP kinase, CMP complex, open c 93.62
3r20_A233 Cytidylate kinase; structural genomics, seattle st 93.13
2grj_A192 Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosp 92.68
3aez_A312 Pantothenate kinase; transferase, homodimer, COA b 92.28
2pbr_A195 DTMP kinase, thymidylate kinase; transferase, nucl 91.86
3fdi_A201 Uncharacterized protein; cytidylate kinase like pr 90.21
2z0h_A197 DTMP kinase, thymidylate kinase; ATP-binding, nucl 89.03
3hdt_A223 Putative kinase; structura genomics, PSI-2, protei 88.67
3a00_A186 Guanylate kinase, GMP kinase; domain movement, dim 87.96
2pt5_A168 Shikimate kinase, SK; aromatic amino acid biosynth 87.93
3t61_A202 Gluconokinase; PSI-biology, structural genomics, p 87.56
1ukz_A203 Uridylate kinase; transferase; HET: ADP AMP; 1.90A 87.31
3vaa_A199 Shikimate kinase, SK; structural genomics, center 87.04
2qor_A204 Guanylate kinase; phosphotransferase, purine metab 86.42
2bwj_A199 Adenylate kinase 5; phosphoryl transfer reaction, 86.11
2jaq_A205 Deoxyguanosine kinase; transferase, deoxyribonucle 85.13
2qt1_A207 Nicotinamide riboside kinase 1; non-protein kinase 84.84
3kb2_A173 SPBC2 prophage-derived uncharacterized protein YOR 83.4
1tev_A196 UMP-CMP kinase; ploop, NMP binding region, LID reg 81.31
2vp4_A230 Deoxynucleoside kinase; ATP-binding, DNA synthesis 81.18
1via_A175 Shikimate kinase; structural genomics, transferase 80.89
1zuh_A168 Shikimate kinase; alpha-beta protein, transferase; 80.85
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1 Back     alignment and structure
Probab=100.00  E-value=2e-67  Score=466.48  Aligned_cols=210  Identities=32%  Similarity=0.536  Sum_probs=200.9

Q ss_pred             CCCceeeecCchHHHHHhHhhhcCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeec-cceeEEEe
Q 023344           71 IYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFC-KKLCGVSI  149 (283)
Q Consensus        71 ~~~~v~vl~~~~~l~~llt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~-~~i~~V~I  149 (283)
                      .++|+|+++| |+++||+|+|||++|++.+||++++||+++|+|||++++|+++++|+||+| .++|..+. +++|+|||
T Consensus         7 ~~~~v~v~~h-p~i~~~lt~lRd~~t~~~~Fr~~~~rl~~lL~yEa~~~lp~~~~~V~TP~g-~~~g~~~~~~~i~~V~I   84 (217)
T 3dmp_A            7 RFPNLFILDH-PLIQHKLTHMRDKDTSTRTFRELLREITLLMGYEITRNLPITTKRVETPLV-EIDAPVIAGKKLAIVPV   84 (217)
T ss_dssp             TCTTEEEECC-HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEECSSC-EEEEEEECGGGEEEEEE
T ss_pred             CCCCeEecCC-HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHhcCCceeEEEECCCe-EEEEEEecCCcEEEEEe
Confidence            3578999998 589999999999999999999999999999999999999999999999999 58899886 89999999


Q ss_pred             cccchHHHHHHHHhccCceeeeEEEEecCCCCceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCCccEE
Q 023344          150 VRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHII  229 (283)
Q Consensus       150 lRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e~~I~  229 (283)
                      +|+|++|++++++++|++++|+|++|||+.|.++.||.++| ++++++|||+|||+|||+|+++|++.|+++|+||++|+
T Consensus        85 lRaG~~m~~~l~~~ip~a~vg~i~~~Rd~~t~p~~~~~~lP-~i~~~~VilvD~~laTG~T~~~ai~~L~~~G~pe~~I~  163 (217)
T 3dmp_A           85 LRAGVGMSDGLLELIPSARVGHIGVYRADDHRPVEYLVRLP-DLEDRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLM  163 (217)
T ss_dssp             ETTTHHHHHHHHHHCTTSEECEEECSCCCSSSCCCSEEECC-CCTTCEEEEECSEESSSHHHHHHHHHHHTTTCCGGGEE
T ss_pred             cccchHHHHHHHHhCcCCceeEEEEEECCCCCcEEEeecCC-CCCCCEEEEEcCcccccHHHHHHHHHHHHcCCCcCeEE
Confidence            99999999999999999999999999999987788999999 99999999999999999999999999999999989999


Q ss_pred             EEEEeeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccCCCC
Q 023344          230 FLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD  283 (283)
Q Consensus       230 ~v~~vas~~gl~~l~~~~P~v~I~ta~iD~~ln~~~~ivPGlGd~GdR~fgt~~  283 (283)
                      ++|++++++|++++.++||+|+||||+||++||++|||+|||||||||||||+.
T Consensus       164 ~~~~vaa~egl~~l~~~~P~v~i~ta~iD~~Lne~~yIvPGlGDaGDR~fgt~~  217 (217)
T 3dmp_A          164 FLALVAAPEGVQVFQDAHPDVKLYVASLDSHLDDHAYIVPGLGDAGDRLFGTKN  217 (217)
T ss_dssp             EECSEECHHHHHHHHHHCTTCEEEESEECCEECTTSCEESSCSCHHHHHHC---
T ss_pred             EEEEEeCHHHHHHHHHHCCCCEEEEEEecCCcCCCCCccCCCCCHHHhhcCCCC
Confidence            999999999999999999999999999999999999999999999999999974
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D* Back     alignment and structure
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A* Back     alignment and structure
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli} Back     alignment and structure
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1 Back     alignment and structure
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1 Back     alignment and structure
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus} Back     alignment and structure
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1 Back     alignment and structure
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A* Back     alignment and structure
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0 Back     alignment and structure
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A Back     alignment and structure
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1 Back     alignment and structure
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis} Back     alignment and structure
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A* Back     alignment and structure
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A* Back     alignment and structure
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A* Back     alignment and structure
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A* Back     alignment and structure
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1 Back     alignment and structure
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens} Back     alignment and structure
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1 Back     alignment and structure
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A* Back     alignment and structure
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1 Back     alignment and structure
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A Back     alignment and structure
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1 Back     alignment and structure
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A* Back     alignment and structure
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1 Back     alignment and structure
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A* Back     alignment and structure
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1 Back     alignment and structure
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A Back     alignment and structure
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei} Back     alignment and structure
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A* Back     alignment and structure
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A* Back     alignment and structure
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A* Back     alignment and structure
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A* Back     alignment and structure
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A* Back     alignment and structure
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A* Back     alignment and structure
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12} Back     alignment and structure
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A* Back     alignment and structure
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A Back     alignment and structure
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae} Back     alignment and structure
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A* Back     alignment and structure
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A* Back     alignment and structure
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix} Back     alignment and structure
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A* Back     alignment and structure
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1 Back     alignment and structure
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens} Back     alignment and structure
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A* Back     alignment and structure
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans} Back     alignment and structure
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A* Back     alignment and structure
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A* Back     alignment and structure
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A* Back     alignment and structure
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis} Back     alignment and structure
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae} Back     alignment and structure
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A Back     alignment and structure
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A* Back     alignment and structure
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A* Back     alignment and structure
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1* Back     alignment and structure
>1a7j_A Phosphoribulokinase; transferase, calvin cycle; 2.50A {Rhodobacter sphaeroides} SCOP: c.37.1.6 Back     alignment and structure
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A* Back     alignment and structure
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani} Back     alignment and structure
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1 Back     alignment and structure
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus} Back     alignment and structure
>4i1u_A Dephospho-COA kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.05A {Burkholderia vietnamiensis} PDB: 4i1v_A* Back     alignment and structure
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii} Back     alignment and structure
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A Back     alignment and structure
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1 Back     alignment and structure
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP} Back     alignment and structure
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus} Back     alignment and structure
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A* Back     alignment and structure
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1 Back     alignment and structure
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A Back     alignment and structure
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6 Back     alignment and structure
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis} Back     alignment and structure
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A* Back     alignment and structure
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A* Back     alignment and structure
>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus} Back     alignment and structure
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A* Back     alignment and structure
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A* Back     alignment and structure
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima} Back     alignment and structure
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A* Back     alignment and structure
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus} Back     alignment and structure
>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class ME structural genomics, protein structure initiative; 2.20A {Eubacterium ventriosum} Back     alignment and structure
>3hdt_A Putative kinase; structura genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.79A {Clostridium symbiosum atcc 14940} Back     alignment and structure
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus} Back     alignment and structure
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti} Back     alignment and structure
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A* Back     alignment and structure
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax} Back     alignment and structure
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens} Back     alignment and structure
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A* Back     alignment and structure
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A* Back     alignment and structure
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A* Back     alignment and structure
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1 Back     alignment and structure
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A* Back     alignment and structure
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2 Back     alignment and structure
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 283
d1bd3a_224 c.61.1.1 (A:) Uracil PRTase, Upp {Toxoplasma gondi 7e-75
d1i5ea_208 c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldoly 3e-61
d1v9sa1208 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus the 6e-61
d1o5oa_210 c.61.1.1 (A:) Uracil PRTase, Upp {Thermotoga marit 1e-57
d1xtta1215 c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus 1e-53
d1a7ja_288 c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sph 5e-18
d1uj2a_213 c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Ho 4e-11
d1sq5a_308 c.37.1.6 (A:) Pantothenate kinase PanK {Escherichi 1e-04
d1wd5a_208 c.61.1.1 (A:) Putative phosphoribosyltransferase T 0.002
>d1bd3a_ c.61.1.1 (A:) Uracil PRTase, Upp {Toxoplasma gondii [TaxId: 5811]} Length = 224 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Toxoplasma gondii [TaxId: 5811]

 Score =  226 bits (577), Expect = 7e-75
 Identities = 114/217 (52%), Positives = 159/217 (73%), Gaps = 1/217 (0%)

Query: 66  HDLCKIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEK 125
            D+   +PNV +++ T Q+R M T+IRD+   K +FVFY+DRLIRL++E  L  LPF +K
Sbjct: 7   QDIITRFPNVVLMKQTAQLRAMMTIIRDKETPKEEFVFYADRLIRLLIEEALNELPFQKK 66

Query: 126 QVVTPTGSMYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGK-QL 184
           +V TP    Y GV F  K+CGVSIVR+GESME+ LRA C+G++IGKILI RD    + +L
Sbjct: 67  EVTTPLDVSYHGVSFYSKICGVSIVRAGESMESGLRAVCRGVRIGKILIQRDETTAEPKL 126

Query: 185 IYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPESHIIFLNLISAPEGIHCVC 244
           IYEKLP DI ER V+LLDP+ AT  S  +AI++L+  GV E  IIF+N+++AP+GI  V 
Sbjct: 127 IYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKEERIIFVNILAAPQGIERVF 186

Query: 245 KRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGT 281
           K +P +++VT+ +D+ LN  + ++PG+G+FGDRYFGT
Sbjct: 187 KEYPKVRMVTAAVDICLNSRYYIVPGIGDFGDRYFGT 223
>d1i5ea_ c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldolyticus [TaxId: 1394]} Length = 208 Back     information, alignment and structure
>d1v9sa1 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus thermophilus [TaxId: 274]} Length = 208 Back     information, alignment and structure
>d1o5oa_ c.61.1.1 (A:) Uracil PRTase, Upp {Thermotoga maritima [TaxId: 2336]} Length = 210 Back     information, alignment and structure
>d1xtta1 c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId: 2287]} Length = 215 Back     information, alignment and structure
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 288 Back     information, alignment and structure
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 213 Back     information, alignment and structure
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]} Length = 308 Back     information, alignment and structure
>d1wd5a_ c.61.1.1 (A:) Putative phosphoribosyltransferase TT1426 (TTHA1462) {Thermus thermophilus [TaxId: 274]} Length = 208 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query283
d1bd3a_224 Uracil PRTase, Upp {Toxoplasma gondii [TaxId: 5811 100.0
d1i5ea_208 Uracil PRTase, Upp {Bacillus caldolyticus [TaxId: 100.0
d1v9sa1208 Uracil PRTase, Upp {Thermus thermophilus [TaxId: 2 100.0
d1o5oa_210 Uracil PRTase, Upp {Thermotoga maritima [TaxId: 23 100.0
d1xtta1215 Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId 100.0
d1uj2a_213 Uridine-cytidine kinase 2 {Human (Homo sapiens) [T 99.16
d1wd5a_208 Putative phosphoribosyltransferase TT1426 (TTHA146 99.15
d1vdma1153 Pprobable purine phosphoribosyltransferase PH0095 99.12
d1a7ja_288 Phosphoribulokinase {Rhodobacter sphaeroides [TaxI 99.0
d1u9ya2129 Phosphoribosylpyrophosphate synthetase {Methanocal 98.98
d1tc1a_184 Hypoxanthine PRTase {Trypanosoma cruzi [TaxId: 569 98.95
d1hgxa_173 Hypoxanthine-guanine-xanthine PRTase {Tritrichomon 98.88
d1yfza1178 Xanthine-guanine PRTase (XPRTase) {Thermoanaerobac 98.87
d1j7ja_172 Hypoxanthine PRTase {Salmonella typhimurium [TaxId 98.83
d1a3ca_178 Pyrimidine operon regulator PyrR {Bacillus subtili 98.82
d1pzma_183 Hypoxanthine-guanine-xanthine PRTase {Leishmania t 98.8
d1w30a_182 Pyrimidine operon regulator PyrR {Mycobacterium tu 98.79
d1ufra_178 Pyrimidine operon regulator PyrR {Thermus thermoph 98.79
d1z7ga1214 Hypoxanthine-guanine PRTase (HGPRTase) {Human (Hom 98.72
d1fsga_233 Hypoxanthine-guanine-xanthine PRTase {Toxoplasma g 98.7
d1qb7a_236 Adenine PRTase {Leishmania donovani [TaxId: 5661]} 98.69
d2c4ka2184 PRPP synthetase-associated protein 1 {Human (Homo 98.67
d1cjba_228 Hypoxanthine-guanine PRTase (HGPRTase) {Plasmodium 98.62
d1dkua2149 Phosphoribosylpyrophosphate synthetase {Bacillus s 98.54
d1nula_150 Xanthine-guanine PRTase (XPRTase) {Escherichia col 98.36
d1dqna_230 Guanine PRTase {Giardia lamblia [TaxId: 5741]} 98.22
d1l1qa_181 Adenine PRTase {Giardia lamblia [TaxId: 5741]} 97.98
d1vcha1174 Putative phosphoribosyltransferase TTHA1613 {Therm 97.93
d1o57a2202 Pur operon repressor (PurR), C-terminal domain {Ba 97.86
d1g2qa_178 Adenine PRTase {Baker's yeast (Saccharomyces cerev 97.81
d1y0ba1191 Xanthine phosphoribosyltransferase {Bacillus subti 97.78
d1zn7a1178 Adenine PRTase {Human (Homo sapiens) [TaxId: 9606] 97.75
d2aeea1208 Orotate PRTase {Streptococcus pyogenes [TaxId: 131 97.46
d1jjva_205 Dephospho-CoA kinase {Haemophilus influenzae [TaxI 97.17
d1lh0a_213 Orotate PRTase {Salmonella typhimurium [TaxId: 903 96.6
d1uf9a_191 Dephospho-CoA kinase {Thermus thermophilus [TaxId: 96.53
d1sq5a_308 Pantothenate kinase PanK {Escherichia coli [TaxId: 96.46
d1vhta_208 Dephospho-CoA kinase {Escherichia coli [TaxId: 562 96.36
d1ecfa1243 Glutamine PRPP amidotransferase, C-terminal domain 95.93
d1gph11231 Glutamine PRPP amidotransferase, C-terminal domain 95.71
d1khta_190 Adenylate kinase {Archaeon Methanococcus voltae [T 91.68
d1nksa_194 Adenylate kinase {Archaeon Sulfolobus acidocaldari 88.25
d1qhxa_178 Chloramphenicol phosphotransferase {Streptomyces v 81.82
>d1bd3a_ c.61.1.1 (A:) Uracil PRTase, Upp {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: PRTase-like
superfamily: PRTase-like
family: Phosphoribosyltransferases (PRTases)
domain: Uracil PRTase, Upp
species: Toxoplasma gondii [TaxId: 5811]

Probab=100.00  E-value=4.7e-73  Score=502.62  Aligned_cols=216  Identities=53%  Similarity=0.969  Sum_probs=208.7

Q ss_pred             ccccCCCceeeecCchHHHHHhHhhhcCCCChhhhHhhHHHHHHHHHHHHhCCCCCeeEEEeCCCCceeeeeeeccceeE
Q 023344           67 DLCKIYPNVYVIQSTFQIRGMHTLIRDRGISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSMYTGVDFCKKLCG  146 (283)
Q Consensus        67 ~~~~~~~~v~vl~~~~~l~~llt~LRd~~T~~~~Fr~~~~rl~~lL~~eal~~lp~~~~~v~TP~g~~~~g~~~~~~i~~  146 (283)
                      ++.+.+||+|+++++||+++|+|+|||++|++++||++++||++||+|||++++|+++++|+||+|.++.|..+.+++|+
T Consensus         8 ~~~~r~pnv~vl~~~p~i~~~lTiLRd~~T~~~~Fr~~~~ri~~lL~yEa~~~l~~~~~~V~TPlg~~~~~~~~~~~v~~   87 (224)
T d1bd3a_           8 DIITRFPNVVLMKQTAQLRAMMTIIRDKETPKEEFVFYADRLIRLLIEEALNELPFQKKEVTTPLDVSYHGVSFYSKICG   87 (224)
T ss_dssp             HHHHHCTTEEECCCCHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTSCBCCEEEECTTSCEEEECCBCCCEEE
T ss_pred             HHHhhCCCeEEeCCCHHHHHHHHHhHCCCCChHHHHHHHHHHHHHHHHHHHhccCceEEEEECCCcccccceecCCceEE
Confidence            34445689999988899999999999999999999999999999999999999999999999999998889988899999


Q ss_pred             EEecccchHHHHHHHHhccCceeeeEEEEecCCCC-ceeEeccCCCCCCCcEEEEEcCcccchHHHHHHHHHHHHcCCCC
Q 023344          147 VSIVRSGESMENALRACCKGIKIGKILIHRDGDNG-KQLIYEKLPNDISERHVLLLDPVLATGNSANQAIQLLIEKGVPE  225 (283)
Q Consensus       147 V~IlRaG~~m~~~l~~~~p~a~~G~i~i~R~~~t~-~~~~y~~lP~~i~~~~Vil~Dp~iaTG~t~~~ai~~L~~~G~~e  225 (283)
                      |||||||++|++|+++++|+|++|||+++||+.|. |.+||.++|++++++.|||+|||+|||+|+.+|++.|+++|+++
T Consensus        88 V~ILRAGl~m~~g~~~~~p~a~~g~i~~~Rde~t~~p~~~y~klP~~i~~~~vil~DPmLATG~S~~~ai~~L~~~g~~~  167 (224)
T d1bd3a_          88 VSIVRAGESMESGLRAVCRGVRIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKE  167 (224)
T ss_dssp             EEEETGGGGGHHHHHHHSTTCCEEEEEEEECTTTCCEEEEEEECCTTGGGSEEEEECSEESSCHHHHHHHHHHHHTTCCG
T ss_pred             EeeecccchhhhhHHhhCCCccceeeeeccccCCCCceeeHhhCCCccccceEEEeChHHhcchHHHHHHHHHHHcCCCc
Confidence            99999999999999999999999999999999998 89999999999999999999999999999999999999999999


Q ss_pred             ccEEEEEEeeCHHHHHHHHHhCCCcEEEEEeecCCCCCCCeeecCCCchhhhccCCC
Q 023344          226 SHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTD  282 (283)
Q Consensus       226 ~~I~~v~~vas~~gl~~l~~~~P~v~I~ta~iD~~ln~~~~ivPGlGd~GdR~fgt~  282 (283)
                      ++|+++|++||++|++++.++||+++||||+||++||++|||+|||||||||||||.
T Consensus       168 ~~I~~v~~iaa~~Gi~~l~~~~P~v~i~ta~ID~~Ln~~~yIvPGlGDaGDR~fGT~  224 (224)
T d1bd3a_         168 ERIIFVNILAAPQGIERVFKEYPKVRMVTAAVDICLNSRYYIVPGIGDFGDRYFGTM  224 (224)
T ss_dssp             GGEEEEEEEECHHHHHHHHHHCTTCEEEEEEECSEECTTSCEESCCSCHHHHHHTCC
T ss_pred             ceEEEEEEEecHHHHHHHHHHCcCCEEEEEEECcccCCCCccCCCCCcHHHhhcCCC
Confidence            999999999999999999999999999999999999999999999999999999983
>d1i5ea_ c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldolyticus [TaxId: 1394]} Back     information, alignment and structure
>d1v9sa1 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1o5oa_ c.61.1.1 (A:) Uracil PRTase, Upp {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1xtta1 c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wd5a_ c.61.1.1 (A:) Putative phosphoribosyltransferase TT1426 (TTHA1462) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1vdma1 c.61.1.1 (A:1-153) Pprobable purine phosphoribosyltransferase PH0095 {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]} Back     information, alignment and structure
>d1u9ya2 c.61.1.2 (A:156-284) Phosphoribosylpyrophosphate synthetase {Methanocaldococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1tc1a_ c.61.1.1 (A:) Hypoxanthine PRTase {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1hgxa_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase {Tritrichomonas foetus [TaxId: 5724]} Back     information, alignment and structure
>d1yfza1 c.61.1.1 (A:3-180) Xanthine-guanine PRTase (XPRTase) {Thermoanaerobacter tengcongensis [TaxId: 119072]} Back     information, alignment and structure
>d1j7ja_ c.61.1.1 (A:) Hypoxanthine PRTase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1a3ca_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1pzma_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase {Leishmania tarentolae [TaxId: 5689]} Back     information, alignment and structure
>d1w30a_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ufra_ c.61.1.1 (A:) Pyrimidine operon regulator PyrR {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1z7ga1 c.61.1.1 (A:4-217) Hypoxanthine-guanine PRTase (HGPRTase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fsga_ c.61.1.1 (A:) Hypoxanthine-guanine-xanthine PRTase {Toxoplasma gondii [TaxId: 5811]} Back     information, alignment and structure
>d1qb7a_ c.61.1.1 (A:) Adenine PRTase {Leishmania donovani [TaxId: 5661]} Back     information, alignment and structure
>d2c4ka2 c.61.1.2 (A:167-350) PRPP synthetase-associated protein 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cjba_ c.61.1.1 (A:) Hypoxanthine-guanine PRTase (HGPRTase) {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1dkua2 c.61.1.2 (A:167-315) Phosphoribosylpyrophosphate synthetase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1nula_ c.61.1.1 (A:) Xanthine-guanine PRTase (XPRTase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1dqna_ c.61.1.1 (A:) Guanine PRTase {Giardia lamblia [TaxId: 5741]} Back     information, alignment and structure
>d1l1qa_ c.61.1.1 (A:) Adenine PRTase {Giardia lamblia [TaxId: 5741]} Back     information, alignment and structure
>d1vcha1 c.61.1.1 (A:2-175) Putative phosphoribosyltransferase TTHA1613 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1o57a2 c.61.1.1 (A:75-276) Pur operon repressor (PurR), C-terminal domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1g2qa_ c.61.1.1 (A:) Adenine PRTase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1y0ba1 c.61.1.1 (A:1-191) Xanthine phosphoribosyltransferase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1zn7a1 c.61.1.1 (A:3-180) Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2aeea1 c.61.1.1 (A:1-208) Orotate PRTase {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1lh0a_ c.61.1.1 (A:) Orotate PRTase {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ecfa1 c.61.1.1 (A:250-492) Glutamine PRPP amidotransferase, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gph11 c.61.1.1 (1:235-465) Glutamine PRPP amidotransferase, C-terminal domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} Back     information, alignment and structure
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} Back     information, alignment and structure