Citrus Sinensis ID: 023378
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 283 | ||||||
| 224141933 | 362 | predicted protein [Populus trichocarpa] | 0.989 | 0.773 | 0.858 | 1e-142 | |
| 449441888 | 361 | PREDICTED: uncharacterized protein LOC10 | 0.982 | 0.770 | 0.855 | 1e-141 | |
| 255557757 | 359 | conserved hypothetical protein [Ricinus | 0.978 | 0.771 | 0.840 | 1e-139 | |
| 224089306 | 359 | predicted protein [Populus trichocarpa] | 0.978 | 0.771 | 0.843 | 1e-138 | |
| 388516027 | 360 | unknown [Lotus japonicus] | 0.978 | 0.769 | 0.816 | 1e-135 | |
| 225430416 | 364 | PREDICTED: uncharacterized protein LOC10 | 0.989 | 0.769 | 0.816 | 1e-135 | |
| 359806029 | 365 | uncharacterized protein LOC100783788 [Gl | 0.992 | 0.769 | 0.816 | 1e-133 | |
| 388500814 | 360 | unknown [Medicago truncatula] | 0.978 | 0.769 | 0.792 | 1e-132 | |
| 356552496 | 363 | PREDICTED: uncharacterized protein LOC10 | 0.989 | 0.771 | 0.823 | 1e-131 | |
| 22327055 | 366 | uncharacterized protein [Arabidopsis tha | 0.992 | 0.767 | 0.803 | 1e-127 |
| >gi|224141933|ref|XP_002324315.1| predicted protein [Populus trichocarpa] gi|222865749|gb|EEF02880.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/282 (85%), Positives = 265/282 (93%), Gaps = 2/282 (0%)
Query: 1 MGCGHLFYSTLVTFSVALITYNIIISANAPLKQDFPNPSS-SSISVDPVIEMPLERSRRH 59
MGCG+ F++ L+T SVALITYNI+ISANAPLKQD P PSS S++ VDPVI+MPLERSRR
Sbjct: 1 MGCGNFFFTVLITLSVALITYNILISANAPLKQDLPGPSSRSTLLVDPVIKMPLERSRR- 59
Query: 60 GAAANKRLFHTAMTASDSVYNTWQCRVMYYWFKKFQNGPNSEMGGFTRILHSGKPDKYMD 119
+ KRLFHTA+TASDSVYNTWQCRVMYYW+KK ++GPNSEMGGFTRILHSGKPDK+M+
Sbjct: 60 SSFGKKRLFHTAVTASDSVYNTWQCRVMYYWYKKHKDGPNSEMGGFTRILHSGKPDKFME 119
Query: 120 EIPTFIAQPLPAGMDQGYIVLNRPWAFVQWLEKADIKEEYILMAEPDHIIVKPIPNLSKD 179
EIPTFIAQPLPAGMDQGYIVLNRPWAFVQWL+K DIKE+YILMAEPDHIIVKPIPNLSKD
Sbjct: 120 EIPTFIAQPLPAGMDQGYIVLNRPWAFVQWLQKTDIKEDYILMAEPDHIIVKPIPNLSKD 179
Query: 180 GLGAAFPFFYIEPKKYESVLRKYFPKDMGPITNIDPIGNSPVVVGRDSLKKIAPVWMNVS 239
GLGAAFPFFYIEPKKYESVLRKYFP+D GPITNIDPIGNSPV+VG++SLKKIAP WMNVS
Sbjct: 180 GLGAAFPFFYIEPKKYESVLRKYFPEDKGPITNIDPIGNSPVIVGKESLKKIAPTWMNVS 239
Query: 240 LAMKKDPETDKAFGWVLEMYAYAVASALNGVGNILYKDFMIQ 281
LAMKKDPETDKAFGWVLEMY YAV+SAL+GVGNILYKDFMIQ
Sbjct: 240 LAMKKDPETDKAFGWVLEMYGYAVSSALHGVGNILYKDFMIQ 281
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449441888|ref|XP_004138714.1| PREDICTED: uncharacterized protein LOC101214063 [Cucumis sativus] gi|449493329|ref|XP_004159257.1| PREDICTED: uncharacterized LOC101214063 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|255557757|ref|XP_002519908.1| conserved hypothetical protein [Ricinus communis] gi|223540954|gb|EEF42512.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224089306|ref|XP_002308683.1| predicted protein [Populus trichocarpa] gi|222854659|gb|EEE92206.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|388516027|gb|AFK46075.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
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| >gi|225430416|ref|XP_002285410.1| PREDICTED: uncharacterized protein LOC100249264 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359806029|ref|NP_001241175.1| uncharacterized protein LOC100783788 [Glycine max] gi|255639667|gb|ACU20127.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|388500814|gb|AFK38473.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356552496|ref|XP_003544603.1| PREDICTED: uncharacterized protein LOC100813136 [Glycine max] | Back alignment and taxonomy information |
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| >gi|22327055|ref|NP_680219.1| uncharacterized protein [Arabidopsis thaliana] gi|17065062|gb|AAL32685.1| Unknown protein [Arabidopsis thaliana] gi|30725568|gb|AAP37806.1| At5g25265 [Arabidopsis thaliana] gi|110740334|dbj|BAF02062.1| hypothetical protein [Arabidopsis thaliana] gi|332006036|gb|AED93419.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 283 | ||||||
| TAIR|locus:504955105 | 366 | AT5G25265 "AT5G25265" [Arabido | 0.992 | 0.767 | 0.785 | 3.1e-122 | |
| TAIR|locus:2059573 | 358 | AT2G25260 "AT2G25260" [Arabido | 0.961 | 0.759 | 0.663 | 7.9e-101 | |
| TAIR|locus:2185046 | 358 | AT5G13500 "AT5G13500" [Arabido | 0.939 | 0.743 | 0.597 | 2.7e-91 | |
| TAIR|locus:2082314 | 802 | AT3G01720 "AT3G01720" [Arabido | 0.720 | 0.254 | 0.254 | 1.4e-05 |
| TAIR|locus:504955105 AT5G25265 "AT5G25265" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1202 (428.2 bits), Expect = 3.1e-122, P = 3.1e-122
Identities = 224/285 (78%), Positives = 247/285 (86%)
Query: 1 MGCGH-LFYSTLVTFSVALITYNIIISANAPLKQDFPNPXXXXX-XVDPVIEMPLERSRR 58
MGCG LFY L+T SVALITYNIIISANAPLKQ FP +DPVIE+P R
Sbjct: 1 MGCGGTLFYPLLITLSVALITYNIIISANAPLKQGFPGRSSSSDISIDPVIELPRGGGSR 60
Query: 59 HGAAANKRLFHTAMTASDSVYNTWQCRVMYYWFKKFQN--GPNSEMGGFTRILHSGKPDK 116
+ RLFHTA+TASDSVYNTWQCRVMYYWFKK Q GP SEMGGFTRILHSGKPD+
Sbjct: 61 NNDGKRIRLFHTAVTASDSVYNTWQCRVMYYWFKKIQASAGPGSEMGGFTRILHSGKPDQ 120
Query: 117 YMDEIPTFIAQPLPAGMDQGYIVLNRPWAFVQWLEKADIKEEYILMAEPDHIIVKPIPNL 176
YMDEIPTF+AQPLP+GMDQGY+VLNRPWAFVQWL++ DIKE+YILM+EPDHIIVKPIPNL
Sbjct: 121 YMDEIPTFVAQPLPSGMDQGYVVLNRPWAFVQWLQQTDIKEDYILMSEPDHIIVKPIPNL 180
Query: 177 SKDGLGAAFPFFYIEPKKYESVLRKYFPKDMGPITNIDPIGNSPVVVGRDSLKKIAPVWM 236
+KDGLGAAFPFFYIEPKKYE VLRKY+P+ GP+TNIDPIGNSPV+VG+D+LKKIAP WM
Sbjct: 181 AKDGLGAAFPFFYIEPKKYEKVLRKYYPEVRGPVTNIDPIGNSPVIVGKDALKKIAPTWM 240
Query: 237 NVSLAMKKDPETDKAFGWVLEMYAYAVASALNGVGNILYKDFMIQ 281
NVSLAMKKDPE DKAFGWVLEMYAYAV+SAL+GV NIL+KDFMIQ
Sbjct: 241 NVSLAMKKDPEADKAFGWVLEMYAYAVSSALHGVSNILHKDFMIQ 285
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| TAIR|locus:2059573 AT2G25260 "AT2G25260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2185046 AT5G13500 "AT5G13500" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2082314 AT3G01720 "AT3G01720" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00