Citrus Sinensis ID: 023409

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
Protein Sequence
MHDMTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIYVHSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMLEAERRLLANALLDITNQRFVLLSESCIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDRALALEASCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHPAKFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVMGFN
Secondary Structure (PSIPRED)
cccccHHHHHHHHHccccccccccccccEEEEEEEEccccccHHHHHHHHccccccEEEEEEcccccccccccccccccEEccccccccccccHHHHHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHHccccEEEEccccccccccccccccccccccccEEEcccEEEEEcccccccccccccccHHHHHHHHcccccccccEEEEEcccccccccccccccccHHHHHHHHccccccccccccccccEEEccccHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHcHHccccccccccEEEEEEEcccccccHHHHHHHHccccccEEEEEEcccccccccccccccccccccccEEEcccccHHHHHHHHHHHHHccccccEEEEEEcccccccccHHHHHHHHcccccHHHHcccccccccccccccccccccHHHHccccEEEEEEHHHccccccccccccccEEEEEccccccccEEEEEEEcccccccccccccccccHHHHHHHHcccccEEcccccccHEHHHHHccHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MHDMTEEELLWRAsmapriheypfkrvpkVAFLFLTRGavtlaplwekffhghegLYSIYvhsspsfnetvpqssvfhgrripskevqwgkfSMLEAERRLLANALLDITNQRFVLLSesciplfnfsTIYNYLINSSKAFIEaydlpgpvgrgrynrpmrpvirleqwrkgSQWFEMDRALALEAscyadehylptfvsakfwkrnsnrsltwvdwskggphpakfqrRDVTIEFLKRlrsgshceyngkrtnICFLFARKFLPNALDRLLRFapkvmgfn
Flexible Loop (DISEMBL)
MHDMTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIYVHSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMLEAERRLLANALLDITNQRFVLLSESCIPLFNFSTIYNYLINSSKAFIEAYDLPgpvgrgrynrpmRPVIRLEQWRKGSQWFEMDRALALEASCYADEHYLPTFvsakfwkrnsNRSLtwvdwskggphpakfqrrdVTIEFLKRlrsgshceyngkRTNICFLFARKFLPNALDRLLrfapkvmgfn
Low Complexity Region (SEG)
MHDMTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIYVHSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMleaerrllanallDITNQRFVLLSESCIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDRALALEASCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHPAKFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVMGFN
Disordered region (IsUnstruct)
********LLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIYVHSSPSF*******SVFHGRRIPSKEVQWGKFSMLEAERRLLANALLDITNQRFVLLSESCIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDRALALEASCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHPAKFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKV****
Disordered Region (DISOPRED)
*HDMTEEELLWRASMA**********VPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIYVHSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMLEAERRLLANALLDITNQRFVLLSESCIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDRALALEASCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHPAKFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVMGFN
Disordered Region (DISEMBL)
********LLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIYVHSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMLEAERRLLANALLDITNQRFVLLSESCIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDRALALEASCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHPAKFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVMGFN
Disordered Region (DISPRO)
***MTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIYVHSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMLEAERRLLANALLDITNQRFVLLSESCIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDRALALEASCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHPAKFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVMGFN
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MHDMTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIYVHSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMLEAERRLLANALLDITNQRFVLLSESCIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDRALALEASCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHPAKFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVMGFN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
225455992	390	PREDICTED: uncharacterized protein LOC10	0.996	0.720	0.748	1e-130
297734234	365	unnamed protein product [Vitis vinifera]	0.996	0.769	0.748	1e-130
225455990	375	PREDICTED: uncharacterized protein LOC10	1.0	0.752	0.728	1e-128
356522777	447	PREDICTED: uncharacterized protein LOC10	1.0	0.630	0.714	1e-127
356511305	376	PREDICTED: uncharacterized protein LOC10	1.0	0.75	0.721	1e-127
297734233	295	unnamed protein product [Vitis vinifera]	0.989	0.945	0.728	1e-125
224099393	391	predicted protein [Populus trichocarpa]	0.996	0.718	0.723	1e-125
357500289	418	hypothetical protein MTR_6g083830 [Medic	1.0	0.674	0.725	1e-125
356529564	451	PREDICTED: uncharacterized protein LOC10	1.0	0.625	0.722	1e-125
356527841	390	PREDICTED: uncharacterized protein LOC10	1.0	0.723	0.701	1e-125

>gi|225455992|ref|XP_002276828.1| PREDICTED: uncharacterized protein LOC100247520 [Vitis vinifera]

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 223/298 (74%), Positives = 251/298 (84%), Gaps = 17/298 (5%)

Query: 2   HDMTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIYV 61
           HDMT+EELLWRASM PR+  +PFKRVPKVAFLFLTRG + LAP WE FF GHEG YSIYV
Sbjct: 93  HDMTDEELLWRASMVPRVGGFPFKRVPKVAFLFLTRGPLPLAPFWELFFKGHEGRYSIYV 152

Query: 62  HSSPSFNET-VPQSSVFHGRRIPSKEVQWGKFSMLEAERRLLANALLDITNQRFVLLSES 120
           HS PSFN T VPQSSVFHGRRIPSKEVQWGKF+M+EAERRLLANALLDI+NQRFVLLSES
Sbjct: 153 HSHPSFNATLVPQSSVFHGRRIPSKEVQWGKFNMVEAERRLLANALLDISNQRFVLLSES 212

Query: 121 CIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDR 180
           CIPL+NFSTIY+YL+ S K+F+E+YDLPGPVGRGRYN  M+P+I++EQWRKGSQWFEMDR
Sbjct: 213 CIPLYNFSTIYSYLMGSKKSFVESYDLPGPVGRGRYNPRMKPLIKMEQWRKGSQWFEMDR 272

Query: 181 ALALEA----------------SCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHP 224
            LA++                  CYADEHYLPT VS KFW+RNSNRSLTWVDWS GG HP
Sbjct: 273 GLAIQVISDRKYFPVFQKFCTPPCYADEHYLPTLVSVKFWRRNSNRSLTWVDWSHGGAHP 332

Query: 225 AKFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVMGFN 282
           A+F R  VT++FLK+LR+GSHC YNGK +N CF+FARKFLPNALDRLLRF PK+M FN
Sbjct: 333 ARFWRVAVTVDFLKKLRNGSHCHYNGKSSNTCFMFARKFLPNALDRLLRFGPKLMKFN 390

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734234|emb|CBI15481.3| unnamed protein product [Vitis vinifera]

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 223/298 (74%), Positives = 251/298 (84%), Gaps = 17/298 (5%)

Query: 2   HDMTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIYV 61
           HDMT+EELLWRASM PR+  +PFKRVPKVAFLFLTRG + LAP WE FF GHEG YSIYV
Sbjct: 68  HDMTDEELLWRASMVPRVGGFPFKRVPKVAFLFLTRGPLPLAPFWELFFKGHEGRYSIYV 127

Query: 62  HSSPSFNET-VPQSSVFHGRRIPSKEVQWGKFSMLEAERRLLANALLDITNQRFVLLSES 120
           HS PSFN T VPQSSVFHGRRIPSKEVQWGKF+M+EAERRLLANALLDI+NQRFVLLSES
Sbjct: 128 HSHPSFNATLVPQSSVFHGRRIPSKEVQWGKFNMVEAERRLLANALLDISNQRFVLLSES 187

Query: 121 CIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDR 180
           CIPL+NFSTIY+YL+ S K+F+E+YDLPGPVGRGRYN  M+P+I++EQWRKGSQWFEMDR
Sbjct: 188 CIPLYNFSTIYSYLMGSKKSFVESYDLPGPVGRGRYNPRMKPLIKMEQWRKGSQWFEMDR 247

Query: 181 ALALEA----------------SCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHP 224
            LA++                  CYADEHYLPT VS KFW+RNSNRSLTWVDWS GG HP
Sbjct: 248 GLAIQVISDRKYFPVFQKFCTPPCYADEHYLPTLVSVKFWRRNSNRSLTWVDWSHGGAHP 307

Query: 225 AKFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVMGFN 282
           A+F R  VT++FLK+LR+GSHC YNGK +N CF+FARKFLPNALDRLLRF PK+M FN
Sbjct: 308 ARFWRVAVTVDFLKKLRNGSHCHYNGKSSNTCFMFARKFLPNALDRLLRFGPKLMKFN 365

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225455990|ref|XP_002276811.1| PREDICTED: uncharacterized protein LOC100252627 [Vitis vinifera]

 Score =  463 bits (1191), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 217/298 (72%), Positives = 248/298 (83%), Gaps = 16/298 (5%)

Query: 1   MHDMTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIY 60
           +HDM + ELLWRASM PR+ E+PFKRVPK+AFLFLTRG++ LAPLWE FF GHE LYSIY
Sbjct: 78  IHDMKDAELLWRASMVPRVGEFPFKRVPKIAFLFLTRGSLPLAPLWEMFFRGHEALYSIY 137

Query: 61  VHSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMLEAERRLLANALLDITNQRFVLLSES 120
           VHS PSFN TVP+SSVF+GR IPS+EVQWG FSMLEAERRLLANALLDI+N RFVLLSES
Sbjct: 138 VHSDPSFNRTVPKSSVFYGRSIPSQEVQWGNFSMLEAERRLLANALLDISNHRFVLLSES 197

Query: 121 CIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDR 180
           CIPLFNFSTIY+YL+ S+K+FIEAYDLPGPVGR RY+  M+P++ + QWRKGSQWFEMDR
Sbjct: 198 CIPLFNFSTIYSYLMASTKSFIEAYDLPGPVGRARYDHRMKPIVTIGQWRKGSQWFEMDR 257

Query: 181 ALAL----------------EASCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHP 224
            LA+                EASCYADEHYLPT VS +FW+RN+NRSLTWVDWS GG HP
Sbjct: 258 GLAIEVISDRKYFAVFRECCEASCYADEHYLPTLVSIEFWRRNANRSLTWVDWSNGGAHP 317

Query: 225 AKFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVMGFN 282
           A F RRDVT+EFL+ LR+ SHC+YNG  T+ICFLFARKFLP  L+RLLR APK+M FN
Sbjct: 318 AGFWRRDVTVEFLQSLRTESHCQYNGNNTDICFLFARKFLPGTLNRLLRVAPKLMKFN 375

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522777|ref|XP_003530022.1| PREDICTED: uncharacterized protein LOC100791882 [Glycine max]

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 213/298 (71%), Positives = 249/298 (83%), Gaps = 16/298 (5%)

Query: 1   MHDMTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIY 60
           MHDM++EELLWRASM P +H+ PFK+ PK+AF+FLT+G V LAPLW++FF G+EGLYS+Y
Sbjct: 150 MHDMSDEELLWRASMVPMVHKLPFKQTPKIAFMFLTKGPVLLAPLWQRFFKGNEGLYSMY 209

Query: 61  VHSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMLEAERRLLANALLDITNQRFVLLSES 120
           VHS PSFNETVP+SSVFHGR IPS+EV+WG+ SM+EAERRLLANAL+D TNQRFVLLSES
Sbjct: 210 VHSYPSFNETVPESSVFHGRNIPSQEVRWGENSMIEAERRLLANALVDFTNQRFVLLSES 269

Query: 121 CIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDR 180
           CIPLFNFSTIY YL+NS+K F+EAYDLPG VG GRY+  MRP IRL QWRKGSQWF++DR
Sbjct: 270 CIPLFNFSTIYTYLMNSTKTFVEAYDLPGEVGHGRYSPQMRPQIRLSQWRKGSQWFQIDR 329

Query: 181 ALALEA----------------SCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHP 224
           +LAL+                 SCY+DEHYLPT VS KFWKRNSNR+LTWVDWS+GGPHP
Sbjct: 330 SLALQIVSDHQYFSVFKKYCKPSCYSDEHYLPTLVSIKFWKRNSNRTLTWVDWSRGGPHP 389

Query: 225 AKFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVMGFN 282
           +++ R DVTIEF  +LR G  CEYNG+ TNIC LFARKF P+ALDRLLRFAPK+M FN
Sbjct: 390 SRYFRTDVTIEFFNKLRFGRSCEYNGRTTNICHLFARKFTPHALDRLLRFAPKIMQFN 447

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356511305|ref|XP_003524367.1| PREDICTED: uncharacterized protein LOC100815747 [Glycine max]

 Score =  461 bits (1185), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 215/298 (72%), Positives = 245/298 (82%), Gaps = 16/298 (5%)

Query: 1   MHDMTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIY 60
           MHDMTEEELLWRASM P I E P+K  PKVAF+FLT+G V L PLWE+FF G+EG YSIY
Sbjct: 79  MHDMTEEELLWRASMVPTIKEMPYKHTPKVAFMFLTKGPVLLGPLWERFFKGNEGFYSIY 138

Query: 61  VHSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMLEAERRLLANALLDITNQRFVLLSES 120
           VHS PSFN+TVPQSSVFH RRIPSKEV+WG F+++ AERRLLANALLD +NQRFVLLSES
Sbjct: 139 VHSHPSFNDTVPQSSVFHRRRIPSKEVRWGDFNIVGAERRLLANALLDFSNQRFVLLSES 198

Query: 121 CIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDR 180
           CIPLFNFSTIYNYL+NS++ F+EAYD+PG VGRGRY+  MRP++ L QWRKGSQWF++DR
Sbjct: 199 CIPLFNFSTIYNYLMNSTETFVEAYDMPGAVGRGRYSPRMRPLVNLSQWRKGSQWFQIDR 258

Query: 181 ALALEA----------------SCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHP 224
           ALA+E                  CY DEHYLPTFVS  FWKRNSNR+LTWVDWS+GGPHP
Sbjct: 259 ALAIEIVSDQQYFPVFKKYCRNGCYGDEHYLPTFVSIMFWKRNSNRTLTWVDWSRGGPHP 318

Query: 225 AKFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVMGFN 282
           A+F R+DVTI+FLKRLR G  C+YNGK TNIC LFARKF P  LDRLLRFAP++M FN
Sbjct: 319 ARFMRQDVTIDFLKRLRHGRTCQYNGKSTNICHLFARKFNPQGLDRLLRFAPRIMQFN 376

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734233|emb|CBI15480.3| unnamed protein product [Vitis vinifera]

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/295 (72%), Positives = 245/295 (83%), Gaps = 16/295 (5%)

Query: 4   MTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIYVHS 63
           M + ELLWRASM PR+ E+PFKRVPK+AFLFLTRG++ LAPLWE FF GHE LYSIYVHS
Sbjct: 1   MKDAELLWRASMVPRVGEFPFKRVPKIAFLFLTRGSLPLAPLWEMFFRGHEALYSIYVHS 60

Query: 64  SPSFNETVPQSSVFHGRRIPSKEVQWGKFSMLEAERRLLANALLDITNQRFVLLSESCIP 123
            PSFN TVP+SSVF+GR IPS+EVQWG FSMLEAERRLLANALLDI+N RFVLLSESCIP
Sbjct: 61  DPSFNRTVPKSSVFYGRSIPSQEVQWGNFSMLEAERRLLANALLDISNHRFVLLSESCIP 120

Query: 124 LFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDRALA 183
           LFNFSTIY+YL+ S+K+FIEAYDLPGPVGR RY+  M+P++ + QWRKGSQWFEMDR LA
Sbjct: 121 LFNFSTIYSYLMASTKSFIEAYDLPGPVGRARYDHRMKPIVTIGQWRKGSQWFEMDRGLA 180

Query: 184 L----------------EASCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHPAKF 227
           +                EASCYADEHYLPT VS +FW+RN+NRSLTWVDWS GG HPA F
Sbjct: 181 IEVISDRKYFAVFRECCEASCYADEHYLPTLVSIEFWRRNANRSLTWVDWSNGGAHPAGF 240

Query: 228 QRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVMGFN 282
            RRDVT+EFL+ LR+ SHC+YNG  T+ICFLFARKFLP  L+RLLR APK+M FN
Sbjct: 241 WRRDVTVEFLQSLRTESHCQYNGNNTDICFLFARKFLPGTLNRLLRVAPKLMKFN 295

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099393|ref|XP_002311468.1| predicted protein [Populus trichocarpa] gi|222851288|gb|EEE88835.1| predicted protein [Populus trichocarpa]

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 215/297 (72%), Positives = 246/297 (82%), Gaps = 16/297 (5%)

Query: 2   HDMTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIYV 61
           HDM E+ELLWRASM PRI EYPF RVPKVAF+FLT+G V +APLWE+FF GHEGLYSIYV
Sbjct: 94  HDMDEKELLWRASMTPRIREYPFDRVPKVAFMFLTKGPVLMAPLWERFFQGHEGLYSIYV 153

Query: 62  HSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMLEAERRLLANALLDITNQRFVLLSESC 121
           HSSPS+NE+ P+S VFHGRRIPSK+VQWG  +++EAERRLLANALLDI+NQRFVLLSESC
Sbjct: 154 HSSPSYNESEPESPVFHGRRIPSKDVQWGNTNIIEAERRLLANALLDISNQRFVLLSESC 213

Query: 122 IPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDRA 181
           IP+F+FST+Y YL+NS+K  +++Y L GPVG GRYN  MRPVI++EQWRKGSQWFEMDR 
Sbjct: 214 IPIFDFSTVYTYLMNSTKNHVDSYVLDGPVGNGRYNPRMRPVIKIEQWRKGSQWFEMDRD 273

Query: 182 LALE----------------ASCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHPA 225
           LA+E                  CYADEHYLPTFVS K  +RNSNRSLTWVDWS+GG HPA
Sbjct: 274 LAIEVVSDQEYFPVFQKYCKGHCYADEHYLPTFVSMKHSERNSNRSLTWVDWSRGGAHPA 333

Query: 226 KFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVMGFN 282
           KF RR+VT+EFL+R+RSGS C YN   TN CFLFARKF PNAL+RLLRFAPKVM FN
Sbjct: 334 KFLRREVTVEFLERMRSGSKCVYNANSTNTCFLFARKFWPNALERLLRFAPKVMHFN 390

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357500289|ref|XP_003620433.1| hypothetical protein MTR_6g083830 [Medicago truncatula] gi|355495448|gb|AES76651.1| hypothetical protein MTR_6g083830 [Medicago truncatula]

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 217/299 (72%), Positives = 248/299 (82%), Gaps = 17/299 (5%)

Query: 1   MHDMTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIY 60
           MHDM EEEL WRASM P IH+ PFK++PKVAF+FLT+G V LAPLWEKFF G+EGLYSIY
Sbjct: 120 MHDMNEEELFWRASMIPMIHKPPFKQIPKVAFMFLTKGHVLLAPLWEKFFKGNEGLYSIY 179

Query: 61  VHSSPSFNETV-PQSSVFHGRRIPSKEVQWGKFSMLEAERRLLANALLDITNQRFVLLSE 119
           +H +PSFNETV  QSSVFHGRRIPSKEV+WG+ SM+EAERRLLANALLD +NQRFVLLSE
Sbjct: 180 IHPNPSFNETVYDQSSVFHGRRIPSKEVKWGENSMIEAERRLLANALLDFSNQRFVLLSE 239

Query: 120 SCIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMD 179
           SCIPLFNFSTIY YL+NS K F+EAYDL G VGRGRYN  M P+I+L QWRKGSQWF++D
Sbjct: 240 SCIPLFNFSTIYTYLMNSEKTFVEAYDLEGAVGRGRYNYKMSPLIKLSQWRKGSQWFQID 299

Query: 180 RALAL----------------EASCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPH 223
           R+LAL                +  CY+DEHY+PT VS KFWKRNSNR+LTWVDWSKGGPH
Sbjct: 300 RSLALHIVSDKLYFSMFKNYCDPPCYSDEHYMPTMVSIKFWKRNSNRTLTWVDWSKGGPH 359

Query: 224 PAKFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVMGFN 282
           P+KF R+ +TI+FL+RLR GS CEYNGK  N+C LFARKF P+ALDRLLRFAPK+M FN
Sbjct: 360 PSKFFRQHLTIDFLERLRFGSTCEYNGKTINVCHLFARKFTPHALDRLLRFAPKLMQFN 418

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356529564|ref|XP_003533360.1| PREDICTED: uncharacterized protein LOC100803748 [Glycine max]

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 216/299 (72%), Positives = 248/299 (82%), Gaps = 17/299 (5%)

Query: 1   MHDMTEEELLWRASMAPRIHEYPFKRV-PKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSI 59
           MHDM++EELLWRASM P +H+ PFK+   KVAF+FLT+G V LAPLWE+FF G+E LYSI
Sbjct: 153 MHDMSDEELLWRASMVPMVHKLPFKQTTAKVAFMFLTKGPVLLAPLWERFFKGNERLYSI 212

Query: 60  YVHSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMLEAERRLLANALLDITNQRFVLLSE 119
           YVHS+PSFNETVP+SSVFHGR IPS+EV+WG+ SM+EAERRLLANALLD +NQRFVL+SE
Sbjct: 213 YVHSNPSFNETVPESSVFHGRNIPSQEVRWGENSMIEAERRLLANALLDFSNQRFVLVSE 272

Query: 120 SCIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMD 179
           SCIPLFNFSTIY YL+NS+K F+EAYDLPG VGRGRY   MRP IRL QWRKGSQWF++D
Sbjct: 273 SCIPLFNFSTIYTYLMNSTKTFVEAYDLPGEVGRGRYTPHMRPHIRLSQWRKGSQWFQID 332

Query: 180 RALALEA----------------SCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPH 223
           R LAL+                 SC  DEHYLPTFVS KFWKRNSNR+LTWVDWS+GGPH
Sbjct: 333 RYLALQIISDHQYFPVFKKYCNPSCSCDEHYLPTFVSIKFWKRNSNRTLTWVDWSRGGPH 392

Query: 224 PAKFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVMGFN 282
           P+++ R DVTIEFL +LR GS CEYNG+ TNIC LFARKF P+ALDRLLRFAPK+M FN
Sbjct: 393 PSRYFRTDVTIEFLNKLRYGSSCEYNGRTTNICHLFARKFTPHALDRLLRFAPKIMQFN 451

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527841|ref|XP_003532515.1| PREDICTED: uncharacterized protein LOC100782511 [Glycine max]

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 209/298 (70%), Positives = 245/298 (82%), Gaps = 16/298 (5%)

Query: 1   MHDMTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIY 60
           MHDMTEEELLWRASM P I E P+   PKVAF+FLT+G+V LAPLWE+FF G+E  YSIY
Sbjct: 93  MHDMTEEELLWRASMVPMIKELPYNHTPKVAFMFLTKGSVLLAPLWERFFKGNEAFYSIY 152

Query: 61  VHSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMLEAERRLLANALLDITNQRFVLLSES 120
           VHS PSFN+TVPQ+SVFHGRRIPSKEV+WG F+++ AERRLLANALLD +NQ FVLLSES
Sbjct: 153 VHSLPSFNDTVPQTSVFHGRRIPSKEVRWGDFNIVGAERRLLANALLDFSNQHFVLLSES 212

Query: 121 CIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDR 180
           CIPLFNFSTIYNYL+NS+K F+EAYD+PG VGRGRY+  MRP++ L QW+KGSQWF++DR
Sbjct: 213 CIPLFNFSTIYNYLMNSTKTFVEAYDMPGAVGRGRYSPRMRPLVNLSQWKKGSQWFQIDR 272

Query: 181 ALALEA----------------SCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHP 224
           ALA++                  CY DEHYLPTFVS +FWKRNSNR+LT+VDWS+GG HP
Sbjct: 273 ALAIDIVSDQQYFPLFNKYCKNRCYGDEHYLPTFVSIRFWKRNSNRTLTFVDWSRGGAHP 332

Query: 225 AKFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVMGFN 282
           A+F R+ VT++FLKRLR G  C YNGK TNIC LFARKF+P ALDRLLRFAP++M FN
Sbjct: 333 ARFMRQHVTVDFLKRLRHGRTCLYNGKTTNICHLFARKFMPQALDRLLRFAPRIMQFN 390

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
TAIR|locus:2181945	386	AT5G11730 [Arabidopsis thalian	0.996	0.727	0.535	8.9e-86
TAIR|locus:2202329	392	AT1G68380 [Arabidopsis thalian	0.989	0.711	0.535	1.2e-81
TAIR|locus:2094781	383	AT3G21310 [Arabidopsis thalian	0.992	0.731	0.510	1.8e-80
TAIR|locus:2180552	387	AT5G25970 [Arabidopsis thalian	0.989	0.720	0.498	1.8e-78
TAIR|locus:2017592	406	AT1G51770 [Arabidopsis thalian	0.985	0.684	0.523	6.2e-78
TAIR|locus:2027769	418	AT1G73810 [Arabidopsis thalian	0.847	0.571	0.565	5.3e-72
TAIR|locus:2197354	651	AT1G10880 [Arabidopsis thalian	0.911	0.394	0.5	4.8e-71
TAIR|locus:2012748	412	AT1G10280 [Arabidopsis thalian	0.851	0.582	0.492	1.2e-67
TAIR|locus:2202324	408	AT1G68390 [Arabidopsis thalian	0.765	0.529	0.545	1.5e-65
TAIR|locus:2181442	411	AT5G16170 [Arabidopsis thalian	0.886	0.608	0.476	5.4e-63

TAIR|locus:2181945 AT5G11730 [Arabidopsis thaliana (taxid:3702)]

 Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
 Identities = 159/297 (53%), Positives = 205/297 (69%)

Query:     1 MHDMTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIY 60
             MH+M++EELLWRAS  PR  EYPFKRVPKVAF+FLT+G + LA LWE+F  GH+GLYS+Y
Sbjct:    90 MHNMSDEELLWRASFWPRRKEYPFKRVPKVAFMFLTKGPLPLASLWERFLKGHKGLYSVY 149

Query:    61 VHSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMXXXXXXXXXXXXXDITNQRFVLLSES 120
             +H  PSF    P SSVFH R+IPS+  +WG+ SM             D++N+ FVL+SES
Sbjct:   150 LHPHPSFTAKFPASSVFHRRQIPSQVAEWGRMSMCDAEKRLLANALLDVSNEWFVLVSES 209

Query:   121 CIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDR 180
             CIPL+NF+TIY+YL  S  +F+ A+D PGP GRGRYN  M P + L +WRKGSQWFE++R
Sbjct:   210 CIPLYNFTTIYSYLSRSKHSFMGAFDDPGPFGRGRYNGNMEPEVPLTKWRKGSQWFEVNR 269

Query:   181 ALAL----------------EASCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHP 224
              LA                   +CY DEHY PT ++ +     +NRSLTWVDWS+GGPHP
Sbjct:   270 DLAATIVKDTLYYPKFKEFCRPACYVDEHYFPTMLTIEKPTVLANRSLTWVDWSRGGPHP 329

Query:   225 AKFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVMGF 281
             A F R D+T  F  ++  G +C YNG+ T++C+LFARKF P+AL+ LL  APK++GF
Sbjct:   330 ATFGRSDITENFFGKIFDGRNCSYNGRNTSMCYLFARKFAPSALEPLLHIAPKILGF 386

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2202329 AT1G68380 [Arabidopsis thaliana (taxid:3702)]

 Score = 819 (293.4 bits), Expect = 1.2e-81, P = 1.2e-81
 Identities = 160/299 (53%), Positives = 208/299 (69%)

Query:     1 MHDMTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIY 60
             MHDM + ELLWRASM P+I +YP+ R+PKVAF+FLT G + LAPLWE+FF GHEGL++IY
Sbjct:    96 MHDMEDNELLWRASMDPKIRDYPYPRIPKVAFMFLTWGPLPLAPLWERFFRGHEGLFTIY 155

Query:    61 VHSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMXXXXXXXXXXXXXDITNQRFVLLSES 120
             VH++ S++E +PQ SVF+GRRIPSK V WG  +M             DI N+RF+LLSES
Sbjct:   156 VHTNSSYDEFMPQDSVFYGRRIPSKRVDWGNANMVEAERRLLANALLDINNERFILLSES 215

Query:   121 CIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDR 180
             CIPLFNFST+Y++LI+S+   +++YDL   +GR RY+R M P IR+ QWRKGSQWFE+DR
Sbjct:   216 CIPLFNFSTVYSFLIDSTLTHVDSYDLT--IGRVRYDRRMYPHIRMHQWRKGSQWFELDR 273

Query:   181 ALALEA----------SCYA---DEHYLPTFVSAK--FWKRNSNRSLTWVDWSKGGPHPA 225
             A+ALE             Y+   DEHY+PT ++ +     RN+NR+LTW DWSK   HP 
Sbjct:   274 AMALEVVSDTFYWPIFKAYSRCPDEHYIPTLLNMRPSLGLRNANRTLTWTDWSKRRAHPR 333

Query:   226 KFQRRDVTIEFLK--RLRSGSHCEYNGK-RTNICFLFARKFLPNALDRLLRFAPKVMGF 281
              F   +V +EFL+  R++S   C+ NG+ +  +CFLFARKF   ALD LLR A  VM F
Sbjct:   334 LFGEWEVNVEFLEWLRMKSVGDCKKNGENKMRLCFLFARKFSSTALDELLRLASIVMYF 392

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2094781 AT3G21310 [Arabidopsis thaliana (taxid:3702)]

 Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
 Identities = 151/296 (51%), Positives = 198/296 (66%)

Query:     2 HDMTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIYV 61
             H M + ELLWRASM PRI +YPFKRVPK+AF+FLT+G +  APLWE+FF GHEG YSIYV
Sbjct:    88 HSMNDSELLWRASMEPRILDYPFKRVPKMAFMFLTKGPLPFAPLWERFFKGHEGFYSIYV 147

Query:    62 HSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMXXXXXXXXXXXXXDITNQRFVLLSESC 121
             H+ P++    P SSVF+ R+IPS+ V WG+ SM             DI+N+ FVLLSE+C
Sbjct:   148 HTLPNYRSDFPSSSVFYRRQIPSQHVAWGEMSMCDAERRLLANALLDISNEWFVLLSEAC 207

Query:   122 IPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDRA 181
             IPL  F+ +Y Y+  S  +F+ + D  GP GRGRY+  M P + L +WRKGSQWFE++RA
Sbjct:   208 IPLRGFNFVYRYVSRSRYSFMGSVDEDGPYGRGRYSYAMGPEVSLNEWRKGSQWFEINRA 267

Query:   182 LALEA----------------SCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHPA 225
             LA++                  CY DEHY PT +S  +    +NR+LTW DWS+GG HPA
Sbjct:   268 LAVDIVEDMVYYNKFKEFCRPPCYVDEHYFPTMLSIGYPDFLANRTLTWTDWSRGGAHPA 327

Query:   226 KFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVMGF 281
              F + D+T +F+K+L  G  C YN + + +C+LFARKF P+AL  LL+ APKV+GF
Sbjct:   328 TFGKADITEKFIKKLSRGKACFYNDQPSQVCYLFARKFAPSALKPLLKLAPKVLGF 383

GO:0005634 "nucleus" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2180552 AT5G25970 [Arabidopsis thaliana (taxid:3702)]

 Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
 Identities = 147/295 (49%), Positives = 198/295 (67%)

Query:     1 MHDMTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIY 60
             MH+M++EELLW AS  PR  EYPF RVPK+AF+FLT G + LAPLWE+   GHE LYS+Y
Sbjct:    91 MHNMSDEELLWGASFMPRRKEYPFNRVPKIAFMFLTMGPLPLAPLWERLLKGHEKLYSVY 150

Query:    61 VHSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMXXXXXXXXXXXXXDITNQRFVLLSES 120
             +HS  S +   P SSVF+ R IPS+  +WG+ +M             DI+N+ FVLLSES
Sbjct:   151 IHSPVSSSAKFPASSVFYRRHIPSQVAEWGRMTMCDAERRLLANALLDISNEWFVLLSES 210

Query:   121 CIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDR 180
             CIPLFNF+TIY Y+  S  +F+ ++D PG  GRGRY+  M P + ++QWRKGSQWFE++R
Sbjct:   211 CIPLFNFTTIYTYMTKSEHSFMGSFDDPGAYGRGRYHGNMAPEVFIDQWRKGSQWFEINR 270

Query:   181 ALAL----------------EASCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHP 224
              LA+                + +CY DEHY PT ++ +     +NRS+TWVDWS+GG HP
Sbjct:   271 ELAVSIVKDTLYYPKFKEFCQPACYVDEHYFPTMLTIEKPAALANRSVTWVDWSRGGAHP 330

Query:   225 AKFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVM 279
             A F  +D+  EF  R+  G +C YNG  T++C+LFARKF P+AL+ L++ APK++
Sbjct:   331 ATFGAQDINEEFFARILKGDNCTYNGGYTSMCYLFARKFSPSALEPLVQIAPKLL 385

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2017592 AT1G51770 [Arabidopsis thaliana (taxid:3702)]

 Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
 Identities = 154/294 (52%), Positives = 191/294 (64%)

Query:     2 HDMTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIYV 61
             H M + ELLWRAS+ P+ + YPF+RVPK+AF+FL +G +  APLWEKF  GHEGLYSIYV
Sbjct:    97 HTMNDSELLWRASIEPQRNGYPFRRVPKLAFMFLAKGPLPFAPLWEKFCKGHEGLYSIYV 156

Query:    62 HSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMXXXXXXXXXXXXXDITNQRFVLLSESC 121
             HS PS+     +SSVF+ R IPS+ V WG+ SM             DI+N+ FVLLSESC
Sbjct:   157 HSLPSYKSDFSRSSVFYRRYIPSQAVAWGEMSMGEAERRLLANALLDISNEWFVLLSESC 216

Query:   122 IPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDRA 181
             IPL  FS IY+Y+  S  +F+ A D  GP GRGRY   M P I L QWRKGSQWFE++R 
Sbjct:   217 IPLRGFSFIYSYVSESRYSFMGAADEEGPDGRGRYRTEMEPEITLSQWRKGSQWFEINRK 276

Query:   182 LALEA----------------SCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHPA 225
             LA+E                  CY DEHY PT +S K     +NR+LTW DWS+GG HPA
Sbjct:   277 LAVEIVQDTTYYPKFKEFCRPPCYVDEHYFPTMLSMKHRVLLANRTLTWTDWSRGGAHPA 336

Query:   226 KFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVM 279
              F + DVT  FLK+L     C YN  ++ IC+LFARKF P+AL+ LL+ APK++
Sbjct:   337 TFGKADVTESFLKKLTGAKSCLYNDHQSQICYLFARKFAPSALEPLLQLAPKIL 390

GO:0005634 "nucleus" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2027769 AT1G73810 [Arabidopsis thaliana (taxid:3702)]

 Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
 Identities = 147/260 (56%), Positives = 176/260 (67%)

Query:     1 MHDMTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIY 60
             +H+MTEEELL RAS   +I E   K   K AF+FLTRG + LA LWE+FF GHEGL+SIY
Sbjct:   122 VHNMTEEELLLRAS---KIQEKTLKMTKKAAFMFLTRGKLPLAKLWERFFKGHEGLFSIY 178

Query:    61 VHSSPSF--NETVPQSSVFHGRRIPSKEVQWGKFSMXXXXXXXXXXXXXDITNQRFVLLS 118
             +H+S  F  ++  P++S F+ RRIPSKEV WG  SM             D  N RFVLLS
Sbjct:   179 IHTSDPFYFDDHTPETSPFYRRRIPSKEVGWGMVSMVAAERRLLANALLDAGNHRFVLLS 238

Query:   119 ESCIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEM 178
             ES IPLFNFSTIY+YLINS  ++++ YDLPGP GRGRYNR M PVI    WRKGSQWFE+
Sbjct:   239 ESDIPLFNFSTIYSYLINSQHSYVDVYDLPGPAGRGRYNRRMSPVISRTNWRKGSQWFEI 298

Query:   179 DRALALEA----------------SCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGP 222
             DR +AL                  +CYADEHYL TFV A F  +N+NRSLTW DWS+ GP
Sbjct:   299 DREVALAVVSDTTYFPVFEKYCLWNCYADEHYLSTFVHAMFPGKNANRSLTWTDWSRRGP 358

Query:   223 HPAKFQRRDVTIEFLKRLRS 242
             HP K+ RR VT EFL+R+R+
Sbjct:   359 HPRKYTRRSVTGEFLRRVRN 378

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2197354 AT1G10880 [Arabidopsis thaliana (taxid:3702)]

 Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
 Identities = 139/278 (50%), Positives = 183/278 (65%)

Query:     3 DMTEEELLWRASMAPRIHEYPFKRV--PKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIY 60
             ++ +EEL+WRA+MAPR    P K    PKVAF+FLTR  + L+PLWE FF GHEG YSIY
Sbjct:    93 NIADEELMWRAAMAPRS---PMKNETHPKVAFMFLTRWNLPLSPLWEMFFKGHEGFYSIY 149

Query:    61 VHSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMXXXXXXXXXXXXXDITNQRFVLLSES 120
             VH+SP F +  P+SSVF+ +RIPSK V+WGK SM             + +N RFVLLSE+
Sbjct:   150 VHTSPEFTQEPPESSVFYKKRIPSKAVEWGKCSMMDAEKRLISHALLEPSNARFVLLSET 209

Query:   121 CIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDR 180
             CIPLFNF+TIY YL  S+++F+ ++D P P+GRGRY   M P + L  WRKG+QWFE+ R
Sbjct:   210 CIPLFNFTTIYTYLTRSTRSFLGSFDDPRPMGRGRYTPKMLPHVSLSDWRKGNQWFEISR 269

Query:   181 ALALEA----------------SCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHP 224
              +A E                  CY DEHYLPT V+    + NSNR++TWVDWS+GG HP
Sbjct:   270 RVAAEIVSDRRYYAVFKDHCRPPCYIDEHYLPTLVNKICPEMNSNRTVTWVDWSRGGSHP 329

Query:   225 AKFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARK 262
             A+F R+D+ + FL R+R GS+C Y G+   +  +  +K
Sbjct:   330 ARFVRKDIRVGFLDRIRFGSNCSYEGEAMEVAKIGRKK 367

GO:0005634 "nucleus" evidence=ISM

GO:0009651 "response to salt stress" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2012748 AT1G10280 [Arabidopsis thaliana (taxid:3702)]

 Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
 Identities = 126/256 (49%), Positives = 171/256 (66%)

Query:     2 HDMTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIYV 61
             H MT++EL WRASM P   EYP+ RVPKVAF+FLTRG + + PLWEKFF G+E   S+YV
Sbjct:   116 HGMTDDELFWRASMVPVKEEYPYDRVPKVAFMFLTRGPLPMLPLWEKFFKGNEKYLSVYV 175

Query:    62 HSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMXXXXXXXXXXXXXDITNQRFVLLSESC 121
             H+ P ++  V + S F+ R+IPS+ V+WG   +             D +N+RFVLLSESC
Sbjct:   176 HTPPGYDMNVSRDSPFYDRQIPSQRVEWGSPLLTDAEKRLLANALLDFSNERFVLLSESC 235

Query:   122 IPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDRA 181
             +P++NFST+Y YLINS+ +F+++YD P   GRGRY+R M P I+L  WRKGSQWFE++R 
Sbjct:   236 VPVYNFSTVYTYLINSAYSFVDSYDEPTRYGRGRYSRKMLPDIKLHHWRKGSQWFEVNRK 295

Query:   182 LAL----------------EASCYADEHYLPTFVSAKFWKRNSNRSLTWVDWSKGGPHPA 225
             +A+                  +CY DEHY+PTF++      N+NRS+TWVDWS GGPHPA
Sbjct:   296 IAIYIISDSKYYSLFKQFCRPACYPDEHYIPTFLNMFHGSMNANRSVTWVDWSIGGPHPA 355

Query:   226 KFQRRDVTIEFLKRLR 241
              +   ++T  FL+ +R
Sbjct:   356 TYAAANITEGFLQSIR 371

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2202324 AT1G68390 [Arabidopsis thaliana (taxid:3702)]

 Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
 Identities = 127/233 (54%), Positives = 162/233 (69%)

Query:     1 MHDMTEEELLWRASMAPRIHEYPFKRVPKVAFLFLTRGAVTLAPLWEKFFHGHEGLYSIY 60
             MHDM +EELLWRASMAP+I  YPF R PKVAF+F+T+G + LA LWE+FF GHEGL++IY
Sbjct:   110 MHDMEDEELLWRASMAPKIKNYPFPRTPKVAFMFMTKGHLPLARLWERFFRGHEGLFTIY 169

Query:    61 VHSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMXXXXXXXXXXXXXDITNQRFVLLSES 120
             VHS PS+N++ P+ SVF GR IPSK V WG  +M             DI+N+RFVLLSES
Sbjct:   170 VHSYPSYNQSDPEDSVFRGRHIPSKRVDWGYVNMVEAEQRLLANALLDISNERFVLLSES 229

Query:   121 CIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQWRKGSQWFEMDR 180
             CIPLFNF+T+Y+YLINS++  +E+YD  G VGRGRY+  M+P ++L  WRKGSQW E+DR
Sbjct:   230 CIPLFNFTTVYSYLINSTQTHVESYDQLGGVGRGRYSPLMQPHVQLRHWRKGSQWIEVDR 289

Query:   181 ALALEA----------------SCYADEHYLPTFVSAKFWKRNSNRSLTWVDW 217
             A+ALE                  CYADEHY+PT ++ K   +  N + T + W
Sbjct:   290 AMALEIISDRIYWPLFYSYCHHGCYADEHYIPTLLNIKSSLKRRNSNRT-LTW 341

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2181442 AT5G16170 [Arabidopsis thaliana (taxid:3702)]

 Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
 Identities = 133/279 (47%), Positives = 171/279 (61%)

Query:     2 HDMTEEELLWRASM--AP-----------RIHEYPFKRVPKVAFLFLTRGAVTLAPLWEK 48
             H+M+++EL  +AS   +P           R H    K   KVAF+F+T G + LA LWEK
Sbjct:    96 HNMSDQELFTKASSLSSPTSSLSSSSWLGRRHNNDGKMAVKVAFMFMTGGRLPLAGLWEK 155

Query:    49 FFHGHEGLYSIYVHSSPSFNETVPQSSVFHGRRIPSKEVQWGKFSMXXXXXXXXXXXXXD 108
             FF GHEG YSIYVH++PSF ++ P++SVF+ RRIPS+ V WG  SM             D
Sbjct:   156 FFEGHEGFYSIYVHTNPSFQDSFPETSVFYSRRIPSQPVYWGTSSMVDAEKRLLANALLD 215

Query:   109 ITNQRFVLLSESCIPLFNFSTIYNYLINSSKAFIEAYDLPGPVGRGRYNRPMRPVIRLEQ 168
              +NQRFVLLS+SCIPL+NF+TIY+YL  ++ +FI ++D P   GRGRYN  M P I +  
Sbjct:   216 ESNQRFVLLSDSCIPLYNFTTIYDYLTGTNLSFIGSFDDPRKSGRGRYNHTMYPHINITH 275

Query:   169 WRKGSQWFEMDRALAL----------------EASCYADEHYLPTFVSAKFWKRNSNRSL 212
             WRKGSQWFE  R LAL                +  CY DEHY+PT V     + ++NR+L
Sbjct:   276 WRKGSQWFETTRELALHIIEDTVYYKIFDQHCKPPCYMDEHYIPTLVHMLHGEMSANRTL 335

Query:   213 TWVDWSKGGPHPAKFQRRDVTIEFLKRLRSGSHCEYNGK 251
             TWVDWSK GPHP +F   D+T EFL R+R    C Y G+
Sbjct:   336 TWVDWSKAGPHPGRFIWPDITDEFLNRIRFKEECVYFGR 374

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	282
pfam02485	242	pfam02485, Branch, Core-2/I-Branching enzyme	2e-80

>gnl|CDD|217062 pfam02485, Branch, Core-2/I-Branching enzyme

 Score =  242 bits (619), Expect = 2e-80
 Identities = 107/242 (44%), Positives = 138/242 (57%), Gaps = 30/242 (12%)

Query: 30  VAFLFLT-RGAVTLAPLWEKFFHGHEGLYSIYVH--SSPSFNETVPQ--SSVFHGRRIP- 83
           +AF+FL  +G +   PLW +FF+  + LY IYV   S   F E +    S  F+ R IP 
Sbjct: 1   IAFMFLVYKGDLPFLPLWLRFFYHPQNLYCIYVDAKSPSEFKERLRALASCFFNVRVIPK 60

Query: 84  SKEVQWGKFSMLEAERRLLANALL-DITNQRFVLLSESCIPLFNFSTIYNYLINSSKA-- 140
           S+ V WG  SM++AERRLLAN LL D +   FVLLSES IPL  F  +Y YL + +    
Sbjct: 61  SEPVTWGGHSMVDAERRLLANLLLLDPSWDYFVLLSESDIPLKTFDELYRYLSSLNGNNS 120

Query: 141 FIEAYDLPGPVGRGRYNRPMRPVIRLE----QWRKGSQWFEMDRALALEA---------- 186
           F+E++D PG  GRGRYN  M P I+L     +WRKGSQWF + RA A             
Sbjct: 121 FVESFDDPGWKGRGRYNPRMLPEIKLSDLPLKWRKGSQWFVLSRAFAEYVVSDNLYYPLF 180

Query: 187 -----SCYADEHYLPTFV--SAKFWKRNSNRSLTWVDWSKGGPHPAKFQRRDVTIEFLKR 239
                +CY DEHY PT +     F     NR+LT+VDWS+GG HP  ++  D+  E LKR
Sbjct: 181 KYYCNTCYPDEHYFPTLLGMPGHFPNTCVNRTLTYVDWSRGGCHPKTYRPCDIGPEDLKR 240

Query: 240 LR 241
           +R
Sbjct: 241 IR 242

This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. Length = 242

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	282
PLN03183	421	acetylglucosaminyltransferase family protein; Prov	100.0
PF02485	244	Branch: Core-2/I-Branching enzyme; InterPro: IPR00	100.0
KOG0799	439	consensus Branching enzyme [Carbohydrate transport	99.97
cd06439	251	CESA_like_1 CESA_like_1 is a member of the cellulo	82.16
TIGR03469	384	HonB hopene-associated glycosyltransferase HpnB. T	80.49

>PLN03183 acetylglucosaminyltransferase family protein; Provisional

Probab=100.00  E-value=2.6e-52  Score=395.21  Aligned_cols=230  Identities=21%  Similarity=0.268  Sum_probs=183.9

Q ss_pred             CCCCeEEEEEEe-cC-cccHHHHHHHhhhcCCCCeEEEEEeCCCCCCCC---------------CCCCcccceeeC-Ccc
Q 023409           25 KRVPKVAFLFLT-RG-AVTLAPLWEKFFHGHEGLYSIYVHSSPSFNETV---------------PQSSVFHGRRIP-SKE   86 (282)
Q Consensus        25 ~~~~kiAyLila-~~-~~~l~~L~~~l~~~~~~~~~iyIHvD~k~~~~~---------------~~~~vf~~~~i~-~~~   86 (282)
                      +.++|+||||++ ++ .++++||++++++   +++.||||+|+|++...               ...||++   +. +..
T Consensus        75 ~~~~r~AYLI~~h~~d~~~l~RLL~aLYh---prN~y~IHlDkKS~~~er~~l~~~v~~~~~~~~~~NV~v---l~k~~~  148 (421)
T PLN03183         75 DKLPRFAYLVSGSKGDLEKLWRTLRALYH---PRNQYVVHLDLESPAEERLELASRVENDPMFSKVGNVYM---ITKANL  148 (421)
T ss_pred             CCCCeEEEEEEecCCcHHHHHHHHHHhcC---CCceEEEEecCCCChHHHHHHHHHhhccchhhccCcEEE---Eeccee
Confidence            458999999999 44 4899999999986   56779999999987531               1346665   34 457


Q ss_pred             cccCcccHHHHHHHHHHHHHhC-CCCCEEEEecCCCccCCChHHH-HHHHh-cCCCCcEEeecCCCCCCcccccC-----
Q 023409           87 VQWGKFSMLEAERRLLANALLD-ITNQRFVLLSESCIPLFNFSTI-YNYLI-NSSKAFIEAYDLPGPVGRGRYNR-----  158 (282)
Q Consensus        87 v~WG~~SlV~A~l~ll~~al~~-~~~~~filLSg~d~PL~s~~~i-~~~l~-~~~~~fi~~~~~~~~~~~~Ry~~-----  158 (282)
                      |+|||+|+|+|||++|+.+++. .+|||||||||+||||+|+++| +.|+. +.|+|||++.+..++....|+.+     
T Consensus       149 V~WGG~S~V~AtL~~m~~LL~~~~~WDyfinLSGsDyPLkTqdelI~~F~~~nr~~NFI~~~s~~~wk~~~r~~~~i~~p  228 (421)
T PLN03183        149 VTYRGPTMVANTLHACAILLKRSKDWDWFINLSASDYPLVTQDDLIHTFSTLDRNLNFIEHTSQLGWKEEKRAMPLIIDP  228 (421)
T ss_pred             eccCChHHHHHHHHHHHHHHhhCCCCCEEEEccCCcccccCHHHHHHHHHhCCCCceeeecccccccchhhhcceEEecC
Confidence            9999999999999999999985 7899999999999999999995 55665 67899999875432222222111     


Q ss_pred             --------CC---C--CCCC-ccccccccceEEeehhhhhh-----------------ccccCCcchHHHHhhcc--ccc
Q 023409          159 --------PM---R--PVIR-LEQWRKGSQWFEMDRALALE-----------------ASCYADEHYLPTFVSAK--FWK  205 (282)
Q Consensus       159 --------~~---~--p~i~-~~~~~~GSqW~~Ltr~~~~~-----------------~~~~pDE~ffqTlL~~~--~~~  205 (282)
                              .+   .  ..+| ...+|+||+|++|||++|+|                 ++++|||.||||+|+|+  +..
T Consensus       229 gl~~~~ks~~~~~~~~R~~P~~~~lf~GS~W~sLSR~fvey~l~~~dnlpr~ll~y~~~t~~pdE~fFqTVl~NS~~f~~  308 (421)
T PLN03183        229 GLYSTNKSDIYWVTPRRSLPTAFKLFTGSAWMVLSRSFVEYCIWGWDNLPRTLLMYYTNFVSSPEGYFHTVICNVPEFAK  308 (421)
T ss_pred             ceeecccchhhhhhhhccCCccccccCCCceEEecHHHHHHHHhcccchHHHHHHHHhcCCCCchHHHHHHHhhcccccc
Confidence                    00   0  0122 35689999999999999999                 57889999999999986  678


Q ss_pred             ccCCCceEEEeCCCC-CCCCcccccCCCCHHHHHHHhcCCCcccCCccCCCCceEEecCCCCchhHHHHhchhhc
Q 023409          206 RNSNRSLTWVDWSKG-GPHPAKFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRFAPKVM  279 (282)
Q Consensus       206 ~i~~~~lryidW~~~-~~~P~~l~~~d~~~e~L~~l~~~~~c~~~~~~~~~~~lFARKf~~~~~~~ll~~~~~~~  279 (282)
                      +++|+++|||+|.++ ..||++|+.+|+     ++|.+|            +++|||||+.  ++++|++||+-+
T Consensus       309 t~vn~nLRyI~W~~~~~~~P~~l~~~D~-----~~l~~S------------~~lFARKFd~--d~~vl~~Id~~l  364 (421)
T PLN03183        309 TAVNHDLHYISWDNPPKQHPHTLSLNDT-----EKMIAS------------GAAFARKFRR--DDPVLDKIDKEL  364 (421)
T ss_pred             cccCCceeEEecCCCCCCCCcccCHHHH-----HHHHhC------------CCccccCCCC--ChHHHHHHHHHH
Confidence            889999999999976 459999999998     677775            8899999996  578999998743

>PF02485 Branch: Core-2/I-Branching enzyme; InterPro: IPR003406 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=100.00  E-value=2e-47  Score=340.92  Aligned_cols=205  Identities=33%  Similarity=0.540  Sum_probs=134.7

Q ss_pred             EEEEEEe-c-CcccHHHHHHHhhhcCCCCeEEEEEeCCCCCCCC---------CCCCcccceeeC-CcccccCcccHHHH
Q 023409           30 VAFLFLT-R-GAVTLAPLWEKFFHGHEGLYSIYVHSSPSFNETV---------PQSSVFHGRRIP-SKEVQWGKFSMLEA   97 (282)
Q Consensus        30 iAyLila-~-~~~~l~~L~~~l~~~~~~~~~iyIHvD~k~~~~~---------~~~~vf~~~~i~-~~~v~WG~~SlV~A   97 (282)
                      |||||++ + +++++++|++.++.   +++.||||+|+|++...         ...+|++   ++ |++|.|||+|+|+|
T Consensus         1 iAylil~h~~~~~~~~~l~~~l~~---~~~~f~iHiD~k~~~~~~~~~~~~~~~~~nv~~---v~~r~~v~WG~~S~v~A   74 (244)
T PF02485_consen    1 IAYLILAHKNDPEQLERLLRLLYH---PDNDFYIHIDKKSPDYFYEEIKKLISCFPNVHF---VPKRVDVRWGGFSLVEA   74 (244)
T ss_dssp             EEEEEEESS--HHHHHHHHHHH-----TTSEEEEEE-TTS-HHHHHHHHHHHCT-TTEEE----SS-----TTSHHHHHH
T ss_pred             CEEEEEecCCCHHHHHHHHHHhcC---CCCEEEEEEcCCCChHHHHHHHHhcccCCceee---cccccccccCCccHHHH
Confidence            7999999 7 77899999999975   45678999999976321         2345544   66 78999999999999


Q ss_pred             HHHHHHHHHh-CCCCCEEEEecCCCccCCChHHHHHHHhcC--CCCcEEeecCCCCCCcccccCC----CCCCCCccccc
Q 023409           98 ERRLLANALL-DITNQRFVLLSESCIPLFNFSTIYNYLINS--SKAFIEAYDLPGPVGRGRYNRP----MRPVIRLEQWR  170 (282)
Q Consensus        98 ~l~ll~~al~-~~~~~~filLSg~d~PL~s~~~i~~~l~~~--~~~fi~~~~~~~~~~~~Ry~~~----~~p~i~~~~~~  170 (282)
                      +|.||++|++ +++|+|||||||+||||+|+++|.++|+..  +.+|+++...+......||.+.    +.+.++..++|
T Consensus        75 ~l~ll~~al~~~~~~~y~~llSg~D~Pl~s~~~i~~~l~~~~~~~~f~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~  154 (244)
T PF02485_consen   75 TLNLLREALKRDGDWDYFILLSGQDYPLKSNEEIHEFLESNNGDNNFIESFSDEDPRESGRYNPRIYDPFRPFFRKRTLY  154 (244)
T ss_dssp             HHHHHHHHHHH-S---EEEEEETTEEESS-HHHHHHHHHHTTT--B---BEE--GGGG-HHHHEEEETTEEEEEEEE--E
T ss_pred             HHHHHHHHHhcCCCCcEEEEcccccccccchHHHHHHHHhcCCCCcceecccccccchhhcceeeeeeeccccccccccc
Confidence            9999999999 689999999999999999999999999843  4788988876544333555432    22323334789


Q ss_pred             cccceEEeehhhhhh----------------ccccCCcchHHHHhhcc--cccccCCCceEEEeCC-CCCCCCcccccCC
Q 023409          171 KGSQWFEMDRALALE----------------ASCYADEHYLPTFVSAK--FWKRNSNRSLTWVDWS-KGGPHPAKFQRRD  231 (282)
Q Consensus       171 ~GSqW~~Ltr~~~~~----------------~~~~pDE~ffqTlL~~~--~~~~i~~~~lryidW~-~~~~~P~~l~~~d  231 (282)
                      +|||||+|||++|+|                ++++|||+||||||+++  ++.++.++++|||+|+ ++++||++++.++
T Consensus       155 ~GSqW~~Ltr~~v~~il~~~~~~~~~~~~~~~~~~pDE~ffqTll~n~~~~~~~~~~~~~r~i~W~~~~~~~p~~~~~~~  234 (244)
T PF02485_consen  155 KGSQWFSLTRDFVEYILDDPNYRPKLKKYFRFSLCPDESFFQTLLNNSGHFKDTIVNRNLRYIDWSRRGGCHPKTLTICD  234 (244)
T ss_dssp             EE-S--EEEHHHHHHHHH-HHHHHHHHHHT-TSSSGGGTHHHHH--SSGGG-B-TTTSSSEEE-BTGT-SS---SSEEEE
T ss_pred             ccceeeEeeHHHHHHhhhhHHHHHHHHHhhcCccCcchhhHHHhhcccchhcccccCCCEEEEECCCCCCCCCCeeeeee
Confidence            999999999999999                56899999999999877  5788899999999999 7889999999999


Q ss_pred             CCHHHHHHH
Q 023409          232 VTIEFLKRL  240 (282)
Q Consensus       232 ~~~e~L~~l  240 (282)
                      ++.+.|..|
T Consensus       235 ~~~~d~~~~  243 (244)
T PF02485_consen  235 LGPEDLPWL  243 (244)
T ss_dssp             --GGGHHHH
T ss_pred             eCHHHHHhh
Confidence            877666554

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase family 14 GT14 from CAZY, a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme (2.4.1.150 from EC) and core-2 branching enzyme (2.4.1.102 from EC). I-branching enzyme, an integral membrane protein, converts linear into branched poly-N-acetyllactosaminoglycans in the glycosylation pathway, and is responsible for the production of the blood group I-antigen during embryonic development []. Core-2 branching enzyme, also an integral membrane protein, forms crucial side-chain branches in O-glycans in the glycosylation pathway [].; GO: 0008375 acetylglucosaminyltransferase activity, 0016020 membrane; PDB: 3OTK_D 2GAM_A 2GAK_B.

>KOG0799 consensus Branching enzyme [Carbohydrate transport and metabolism]

Probab=99.97  E-value=1.2e-30  Score=250.42  Aligned_cols=230  Identities=20%  Similarity=0.245  Sum_probs=167.6

Q ss_pred             eEEEEEEe-cCcccHHHHHHHhhhcCCCCeEEEEEeCCCCCCCC---------CCCCcccceeeC-CcccccCcccHHHH
Q 023409           29 KVAFLFLT-RGAVTLAPLWEKFFHGHEGLYSIYVHSSPSFNETV---------PQSSVFHGRRIP-SKEVQWGKFSMLEA   97 (282)
Q Consensus        29 kiAyLila-~~~~~l~~L~~~l~~~~~~~~~iyIHvD~k~~~~~---------~~~~vf~~~~i~-~~~v~WG~~SlV~A   97 (282)
                      -+||+.++ ++.++++++++++|+   +.+.++||+|++++..+         ..+||++   ++ +..|.|||.|++.|
T Consensus       104 ~~a~~~~v~kd~~~verll~aiYh---PqN~ycihvD~~s~~~fk~~~~~L~~cf~NV~v---~~k~~~v~~~G~s~l~a  177 (439)
T KOG0799|consen  104 PAAFLRVVYKDYEQVERLLQAIYH---PQNVYCIHVDAKSPPEFRVAMQQLASCFPNVIV---LPKRESVTYGGHSILAA  177 (439)
T ss_pred             ceEEEEeecccHHHHHHHHHHHhC---CcCcceEEECCCCCHHHHHHHHHHHhcCCceEE---eccccceecCCchhhHH
Confidence            45666666 889999999999997   44557899999988642         2456655   33 57999999999999


Q ss_pred             HHHHHHHHHhC-CCCCEEEEecCCCccCCChHHHHHHHhc-CCCCcEEeecCCCCCCcccccC-----CC--------CC
Q 023409           98 ERRLLANALLD-ITNQRFVLLSESCIPLFNFSTIYNYLIN-SSKAFIEAYDLPGPVGRGRYNR-----PM--------RP  162 (282)
Q Consensus        98 ~l~ll~~al~~-~~~~~filLSg~d~PL~s~~~i~~~l~~-~~~~fi~~~~~~~~~~~~Ry~~-----~~--------~p  162 (282)
                      .++||+.+++. .+|+|||+|||+||||+|+.||.+.|+. +|.|+|+.....+.....+-++     ++        .+
T Consensus       178 ~l~c~~~Ll~~~~~W~yfinLs~~D~PlkT~~elv~i~~~L~g~N~i~~~~~~~~~~~~~~k~~~~~~~~~~~~s~~~~~  257 (439)
T KOG0799|consen  178 HLNCLADLLKLSGDWDYFINLSNSDYPLKTNDELVRIFKILRGANFVEHTSEIGWKLNRKAKWDIIDLKYFRNKSPLPWV  257 (439)
T ss_pred             HHHHHHHHHhcCCCCceeeeccCCCcccCCHHHHHHHHHHcCCcccccCcccccHHHhcccCCcccccchheecCCCccc
Confidence            99999999986 5699999999999999999999999985 8899999876543211111110     01        01


Q ss_pred             CCC-ccccccccceEEeehhhhhh---------------ccccCCcchHHHHhhcccccccCCCc--eEEEeCCC-----
Q 023409          163 VIR-LEQWRKGSQWFEMDRALALE---------------ASCYADEHYLPTFVSAKFWKRNSNRS--LTWVDWSK-----  219 (282)
Q Consensus       163 ~i~-~~~~~~GSqW~~Ltr~~~~~---------------~~~~pDE~ffqTlL~~~~~~~i~~~~--lryidW~~-----  219 (282)
                      .+| ...+++||.|++|+|++|+|               +++.|||.||+|+++|.++.....++  +||+.|..     
T Consensus       258 ~lp~~~ki~~Gs~~~~LsR~fv~y~i~~~~~~~ll~~~~~t~~~dE~f~~Tl~~n~~~~~g~~~~~~lr~~~W~~~~~~~  337 (439)
T KOG0799|consen  258 ILPTALKLFKGSAWVSLSRAFVEYLISGNLPRTLLMYYNNTYSPDEGFFHTLQCNPFGMPGVFNDECLRYTNWDRKDVDP  337 (439)
T ss_pred             cCCCceEEEecceeEEEeHHHHHHHhcCccHHHHHHHHhCccCcchhhhHhhhccccCCCCcccchhhcceecccccccc
Confidence            123 35689999999999999999               78999999999999988554455666  99999986     


Q ss_pred             CCCCCcccccCCCCHHHHHHHhcCCCcccCCcc----CCCCceEEecCCCCchhHHHHhch
Q 023409          220 GGPHPAKFQRRDVTIEFLKRLRSGSHCEYNGKR----TNICFLFARKFLPNALDRLLRFAP  276 (282)
Q Consensus       220 ~~~~P~~l~~~d~~~e~L~~l~~~~~c~~~~~~----~~~~~lFARKf~~~~~~~ll~~~~  276 (282)
                      .++||..++..|.            .|.++.+.    ++...++|-||....|..++....
T Consensus       338 ~~~~c~~~~~~~~------------~cv~g~~~~~~~~k~~~l~~nkvl~~~d~~~i~c~~  386 (439)
T KOG0799|consen  338 PKQHCHSLTVRDF------------ICVFGSGDLPFARKFPHLVANKVLDKFDPELIGCLA  386 (439)
T ss_pred             cccCCcccccccc------------eeeeecchhHHHhhCchhhcccchhccCHHHHhhhh
Confidence            2456777766664            34433321    112445555555555555555443

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily

Probab=82.16  E-value=11  Score=32.60  Aligned_cols=101  Identities=16%  Similarity=0.052  Sum_probs=61.4

Q ss_pred             CCCCCCCeEEEEEEe-cCcccHHHHHHHhhhcCCCC--eEEEEEeCCCCCCCC------CCCCcccceeeCCcccccCcc
Q 023409           22 YPFKRVPKVAFLFLT-RGAVTLAPLWEKFFHGHEGL--YSIYVHSSPSFNETV------PQSSVFHGRRIPSKEVQWGKF   92 (282)
Q Consensus        22 ~~~~~~~kiAyLila-~~~~~l~~L~~~l~~~~~~~--~~iyIHvD~k~~~~~------~~~~vf~~~~i~~~~v~WG~~   92 (282)
                      .+....++++.+|.+ +....+.++++.+.++..+.  +.++|..|.+.+...      ...++..   +.  ..  ...
T Consensus        23 ~~~~~~~~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~v~~---i~--~~--~~~   95 (251)
T cd06439          23 PDPAYLPTVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYADKGVKL---LR--FP--ERR   95 (251)
T ss_pred             CCCCCCCEEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhhCcEEE---EE--cC--CCC
Confidence            344557789999999 55567899999988754323  678888887655321      1111211   11  11  123


Q ss_pred             cHHHHHHHHHHHHHhCCCCCEEEEecCCCccCCChHHHHHHHh
Q 023409           93 SMLEAERRLLANALLDITNQRFVLLSESCIPLFNFSTIYNYLI  135 (282)
Q Consensus        93 SlV~A~l~ll~~al~~~~~~~filLSg~d~PL~s~~~i~~~l~  135 (282)
                      +...|--.+++.|    ..||++++-+.+.|-  .+.+.+.+.
T Consensus        96 g~~~a~n~gi~~a----~~d~i~~lD~D~~~~--~~~l~~l~~  132 (251)
T cd06439          96 GKAAALNRALALA----TGEIVVFTDANALLD--PDALRLLVR  132 (251)
T ss_pred             ChHHHHHHHHHHc----CCCEEEEEccccCcC--HHHHHHHHH
Confidence            3455655555554    348999999999995  455555543

This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB

Probab=80.49  E-value=44  Score=31.66  Aligned_cols=114  Identities=10%  Similarity=0.012  Sum_probs=63.3

Q ss_pred             CCCCeEEEEEEe-cCcccHHHHHHHhhhcCCC-CeEEEEEeCCCCCCCC--------CCC---CcccceeeC--Cccccc
Q 023409           25 KRVPKVAFLFLT-RGAVTLAPLWEKFFHGHEG-LYSIYVHSSPSFNETV--------PQS---SVFHGRRIP--SKEVQW   89 (282)
Q Consensus        25 ~~~~kiAyLila-~~~~~l~~L~~~l~~~~~~-~~~iyIHvD~k~~~~~--------~~~---~vf~~~~i~--~~~v~W   89 (282)
                      ...+++..+|-+ +....+.++++.+.++..+ .+.|+|=-|.+.+...        ...   ++-.   +.  ..+..|
T Consensus        37 ~~~p~VSVIIpa~Ne~~~L~~~L~sL~~q~yp~~~eIIVVDd~StD~T~~i~~~~~~~~~~~~~i~v---i~~~~~~~g~  113 (384)
T TIGR03469        37 EAWPAVVAVVPARNEADVIGECVTSLLEQDYPGKLHVILVDDHSTDGTADIARAAARAYGRGDRLTV---VSGQPLPPGW  113 (384)
T ss_pred             CCCCCEEEEEecCCcHhHHHHHHHHHHhCCCCCceEEEEEeCCCCCcHHHHHHHHHHhcCCCCcEEE---ecCCCCCCCC
Confidence            456789998889 5556799999999875433 4555555554444311        011   2211   22  123455


Q ss_pred             CcccHHHHHHHHHHHHHhC-CCCCEEEEecCCCccCCCh-HHHHHHHhcCCCCcEE
Q 023409           90 GKFSMLEAERRLLANALLD-ITNQRFVLLSESCIPLFNF-STIYNYLINSSKAFIE  143 (282)
Q Consensus        90 G~~SlV~A~l~ll~~al~~-~~~~~filLSg~d~PL~s~-~~i~~~l~~~~~~fi~  143 (282)
                      +|  ...|.-.+++.|-+. ++.++++++-..+.+-... .++.+.+...+...+.
T Consensus       114 ~G--k~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~~~~~~~~vs  167 (384)
T TIGR03469       114 SG--KLWAVSQGIAAARTLAPPADYLLLTDADIAHGPDNLARLVARARAEGLDLVS  167 (384)
T ss_pred             cc--hHHHHHHHHHHHhccCCCCCEEEEECCCCCCChhHHHHHHHHHHhCCCCEEE
Confidence            54  335666677777543 3368888777777653222 3444444444445553

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	282
2gak_A	391	Beta-1,6-N-acetylglucosaminyltransferase; glycopro	8e-22

>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A* Length = 391

 Score = 93.0 bits (230), Expect = 8e-22
 Identities = 39/295 (13%), Positives = 76/295 (25%), Gaps = 52/295 (17%)

Query: 28  PKVAFLFLTRG-AVTLAPLWEKFFHGHEGLYSIYVH----SSPSFNETV-PQSSVFHGRR 81
             +A+  +       L  L    +          +H    +  SF   V   +S F    
Sbjct: 84  FPIAYSIVVHHKIEMLDRLLRAIYMPQ---NFYCIHVDRKAEESFLAAVQGIASCFDNVF 140

Query: 82  IPSK--EVQWGKFSMLEAERRLLANALLDITN-QRFVLLSESCIPLFNFSTIYNYL-INS 137
           + S+   V +  ++ ++A+   + +      N +  + L     P+     I   L  ++
Sbjct: 141 VASQLESVVYASWTRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKCST 200

Query: 138 SKAFIEAYDLP-GPVGRGRY------------NRPMRPVIRLEQWRKGSQWFEMDRALA- 183
            +  +E   +P     R +                  P         GS +F + R    
Sbjct: 201 GENNLETEKMPPNKEERWKKRYAVVDGKLTNTGIVKAPPPLKTPLFSGSAYFVVTREYVG 260

Query: 184 --------------LEASCYADEHYLPTFV-----------SAKFWKRNSNRSLTWVDWS 218
                          + +   DE    T             S K+   + N    +V W 
Sbjct: 261 YVLENENIQKLMEWAQDTYSPDEFLWATIQRIPEVPGSFPSSNKYDLSDMNAIARFVKWQ 320

Query: 219 KGGPHPAKFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLR 273
                 +             R                  LFA KF  +     ++
Sbjct: 321 YFEGDVSNGAPYPPCSGVHVRSVCVFGAGDLSWMLRQHHLFANKFDMDVDPFAIQ 375

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	282
2gak_A	391	Beta-1,6-N-acetylglucosaminyltransferase; glycopro	100.0

>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*

Probab=100.00  E-value=4.7e-51  Score=386.70  Aligned_cols=230  Identities=16%  Similarity=0.173  Sum_probs=185.4

Q ss_pred             CCCeEEEEEEe-cCcccHHHHHHHhhhcCCCCeEEEEEeCCCCCCCC---------CCCCcccceee-CCcccccCcccH
Q 023409           26 RVPKVAFLFLT-RGAVTLAPLWEKFFHGHEGLYSIYVHSSPSFNETV---------PQSSVFHGRRI-PSKEVQWGKFSM   94 (282)
Q Consensus        26 ~~~kiAyLila-~~~~~l~~L~~~l~~~~~~~~~iyIHvD~k~~~~~---------~~~~vf~~~~i-~~~~v~WG~~Sl   94 (282)
                      +.|||||||++ ++.+++++|++.+++   +++.||||+|+|++..+         ...+|++   + ++..|.|||+||
T Consensus        82 ~~~kiAflil~h~d~~~l~rll~~ly~---p~n~y~IHvD~ks~~~~~~~~~~~~~~f~NV~v---~~~~~~v~WGg~S~  155 (391)
T 2gak_A           82 VGFPIAYSIVVHHKIEMLDRLLRAIYM---PQNFYCIHVDRKAEESFLAAVQGIASCFDNVFV---ASQLESVVYASWTR  155 (391)
T ss_dssp             HTSCEEEEEEECSCHHHHHHHHHHHCC---TTSEEEEEECTTSCHHHHHHHHHHHHTCTTEEE---CSSCCCCCTTSHHH
T ss_pred             cCCCEEEEEEecCCHHHHHHHHHHHhC---CCCeEEEEEeCCCCHHHHHHHHHHHhcCCCEEE---eccCcccccCCchH
Confidence            35899999999 888899999999975   56778999999987431         1345543   3 368999999999


Q ss_pred             HHHHHHHHHHHHhC-CCCCEEEEecCCCccCCChHHHHHHHh-cCCCCcEEeecCCCCC-CcccccC-------------
Q 023409           95 LEAERRLLANALLD-ITNQRFVLLSESCIPLFNFSTIYNYLI-NSSKAFIEAYDLPGPV-GRGRYNR-------------  158 (282)
Q Consensus        95 V~A~l~ll~~al~~-~~~~~filLSg~d~PL~s~~~i~~~l~-~~~~~fi~~~~~~~~~-~~~Ry~~-------------  158 (282)
                      |+|+++||+.|+++ .+|+|||||||+||||+|+++|+++|+ ++|+|||++...++.. .|.+|.+             
T Consensus       156 v~A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~~~~~~nFIe~~~~~~~~~~R~~~~~~~~~~~l~~~~~~  235 (391)
T 2gak_A          156 VKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKCSTGENNLETEKMPPNKEERWKKRYAVVDGKLTNTGIV  235 (391)
T ss_dssp             HHHHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHHHTTTCCBCCBEECCGGGSHHHHEEEEEETTEEEEEEEE
T ss_pred             HHHHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHHhcCCCceeeccCCCcccccceEeeeeccccceeeeccc
Confidence            99999999999985 589999999999999999999999998 5799999998765421 1222211             


Q ss_pred             -CCCCCCCccccccccceEEeehhhhhh---------------ccccCCcchHHHHhhccc-cc----------ccCCCc
Q 023409          159 -PMRPVIRLEQWRKGSQWFEMDRALALE---------------ASCYADEHYLPTFVSAKF-WK----------RNSNRS  211 (282)
Q Consensus       159 -~~~p~i~~~~~~~GSqW~~Ltr~~~~~---------------~~~~pDE~ffqTlL~~~~-~~----------~i~~~~  211 (282)
                       ++.|.  ..++++|||||+|||++|+|               ++|+|||+||||++.+.+ ++          ..++++
T Consensus       236 k~~~P~--~~~~~~GSqW~~LtR~~v~~vl~d~~~~~~~~~~k~t~~pDE~ffqTll~~~~~pg~~~~~~~~~~~~~~~~  313 (391)
T 2gak_A          236 KAPPPL--KTPLFSGSAYFVVTREYVGYVLENENIQKLMEWAQDTYSPDEFLWATIQRIPEVPGSFPSSNKYDLSDMNAI  313 (391)
T ss_dssp             CCCCSC--SSCCEECCSCCEEEHHHHHHHHHCHHHHHHHHHHTTSSSGGGTHHHHHTTSTTSTTCCCSSGGGCBCTTTSS
T ss_pred             ccCCcc--ccceecccceeEecHHHHHHHHhCCcHHHHHHHHcCCcCCchhHHHHHhhccCCCCccccccccccccccCc
Confidence             12232  35789999999999999998               799999999999997652 22          234789


Q ss_pred             eEEEeCC-------CCCCCCc----------ccccCCCCHHHHHHHhcCCCcccCCccCCCCceEEecCCCCchhHHHHh
Q 023409          212 LTWVDWS-------KGGPHPA----------KFQRRDVTIEFLKRLRSGSHCEYNGKRTNICFLFARKFLPNALDRLLRF  274 (282)
Q Consensus       212 lryidW~-------~~~~~P~----------~l~~~d~~~e~L~~l~~~~~c~~~~~~~~~~~lFARKf~~~~~~~ll~~  274 (282)
                      +|||+|.       +|++||.          +|+.+|+     ..|+++            ++||||||++++++.+++.
T Consensus       314 lr~i~W~~~~g~~~~G~p~p~c~~~~~~~~C~~~~~Dl-----~~l~~s------------~~lFARKF~~~~d~~~l~~  376 (391)
T 2gak_A          314 ARFVKWQYFEGDVSNGAPYPPCSGVHVRSVCVFGAGDL-----SWMLRQ------------HHLFANKFDMDVDPFAIQC  376 (391)
T ss_dssp             SEEECBTTTCSCGGGTCSSCCCSSEEETTEEECCGGGH-----HHHTTS------------CCSEEECCCTTTCHHHHHH
T ss_pred             eEEEEecccCCccccCCCCCCCccceecceeeecHHHH-----HHHHhC------------CCceEEccCCccCHHHHHH
Confidence            9999997       3555776          8999997     667764            8999999999999999999


Q ss_pred             chhhcC
Q 023409          275 APKVMG  280 (282)
Q Consensus       275 ~~~~~~  280 (282)
                      ||+.+.
T Consensus       377 l~~~l~  382 (391)
T 2gak_A          377 LDEHLR  382 (391)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            998763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	282
d1qg8a_	255	Spore coat polysaccharide biosynthesis protein Sps	84.0

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Spore coat polysaccharide biosynthesis protein SpsA
domain: Spore coat polysaccharide biosynthesis protein SpsA
species: Bacillus subtilis [TaxId: 1423]

Probab=84.00  E-value=1.4  Score=35.05  Aligned_cols=110  Identities=15%  Similarity=0.176  Sum_probs=64.1

Q ss_pred             CeEEEEEEe-cCcccHHHHHHHhhhcCCCCeEEEEEeCCCCCCCC-------CCCCc--ccceeeCCcccccCcccHHHH
Q 023409           28 PKVAFLFLT-RGAVTLAPLWEKFFHGHEGLYSIYVHSSPSFNETV-------PQSSV--FHGRRIPSKEVQWGKFSMLEA   97 (282)
Q Consensus        28 ~kiAyLila-~~~~~l~~L~~~l~~~~~~~~~iyIHvD~k~~~~~-------~~~~v--f~~~~i~~~~v~WG~~SlV~A   97 (282)
                      |+|..+|-+ +.+..+++.++.+..+..+++.|+|.-|.+.+...       ....+  +... ...+...=...+...|
T Consensus         1 P~vSiiip~yN~~~~l~~~l~Si~~Qt~~~~eiivvdd~S~d~t~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~g~~~a   79 (255)
T d1qg8a_           1 PKVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLNDNRVRFYQSD-ISGVKERTEKTRYAAL   79 (255)
T ss_dssp             CCEEEEEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGGSTTEEEEECC-CCSHHHHHSSCHHHHH
T ss_pred             CEEEEEEecCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCccHHHHHHHhhhhccccccccc-ccccccccccchhccc
Confidence            588999999 66777999999999877677888888887654321       01111  1100 0000000123333333


Q ss_pred             HHHHHHHHHhCCCCCEEEEecCCCccCCC-hHHHHHHHh-cCCCCcE
Q 023409           98 ERRLLANALLDITNQRFVLLSESCIPLFN-FSTIYNYLI-NSSKAFI  142 (282)
Q Consensus        98 ~l~ll~~al~~~~~~~filLSg~d~PL~s-~~~i~~~l~-~~~~~fi  142 (282)
                      .=.+++.|    .-+|+++|-+.|++... .+.+.+++. ++...++
T Consensus        80 ~N~gi~~a----~g~~i~~lD~Dd~~~p~~l~~~~~~~~~~~~~~~v  122 (255)
T d1qg8a_          80 INQAIEMA----EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVI  122 (255)
T ss_dssp             HHHHHHHC----CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEE
T ss_pred             cccccccc----ccccccccccccccccchHHHHHHHHHhCCCCCeE
Confidence            33333333    56899999999999765 344555564 3445555