Citrus Sinensis ID: 023450

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
Protein Sequence
MILPFCSNKILIPIPNSSPFFSRRASLVTLLYLFVISSFLFSFSLLKESKKLEEETTMKVHPVPTKKRNNIAIQYFDMNLNNFNSNLRNPQNLSTGFHNKKLRRLPHIFTRVLELPFRSDADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWRFRLPESTRPELASAVFEDGELIVTVPKGGGLEGLEERDGGGGGDGSENGEFRGGGQEFMPSAPGNGGTCTISSTELFSIASLAALTLFPLHKNVSTMLARIT
Secondary Structure (PSIPRED)
cccccccccEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEccccccccccEEEEEEcccccccccccccccccccccccccccccHHHHHHHHccccccccccccEEcccEEEEEEEccccccEEEEEEEEEcccEEEEEEccccccccccccccccEEEEEcccccccccEEEEEEccEEEEEEEcccccccccccccccccccccccccccccccccccccccccEEEEccccHHHHHHHHHHHccccccHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEcccccccccccEEEEEccccccHHHHccccHccccccccccccccccHHHHHEEcccccccccEEEEEccccEEEEEEccccccEEEEEEEEcccEEEEEEEEcccccccccccccccEEEEcccccccHHHEEEEEEccEEEEEEccccccccccccccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
milpfcsnkilipipnsspffsrRASLVTLLYLFVISSFLFSFSLLKESKkleeettmkvhpvptkkrnnIAIQYFDMNLnnfnsnlrnpqnlstgfhnkklrrlpHIFTRvlelpfrsdadvaveespdyFKFVAETDGMGEVRAHMVeihpgvtkivirpngcvelssldeLELDMWrfrlpestrpelasavfedgelivtvpkggglegleerdgggggdgsengefrgggqefmpsapgnggtctisstELFSIASLAALtlfplhknvSTMLARIT
Flexible Loop (DISEMBL)
milpfcsnkilipipnsspFFSRRASLVTLLYLFVISSFLFSFSLLKESKKleeettmkvhpvptkkrnNIAIQYFDMNLNNFNSNLRNPQNLSTGFHNKKLRRLPHIFTRVLELPFRSDADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPgvtkivirpNGCVELSSLDELELDMWRFRLPESTRPELasavfedgelivTVPKGGGLEGLEERDGGGGGDGSENGEFRGGGQEFMPSAPGNGGTCTISSTELFSIASLAALtlfplhknvstmlarit
Low Complexity Region (SEG)
MILPFCSNKILIPIPNSSPFFSRRASLVTLLYLFVIssflfsfsllkeskkleeeTTMKVHPVPTKKRNNIAIQYFDMnlnnfnsnlrnpqnlSTGFHNKKLRRLPHIFTRVLELPFRSDADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNGCVelssldeleldMWRFRLPESTRPELASAVFEDGELIVTVPKggglegleerdgggggdgsengefrgggQEFMPSAPGNGGTCTISSTELFSIASLAALTLFPLHKNVSTMLARIT
Disordered region (IsUnstruct)
**LPFCSNKILIPIPNSSPFFSRRASLVTLLYLFVISSFLFSFSLLK********************RNNIAIQYFDMNLNNFNSNLRNPQNLSTGFHNKKLRRLPHIFTRVLELPFRSDADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWRFRLPESTRPELASAVFEDGELIVTV******************************************TCTISSTELFSIASLAALTLFPLHKNVST******
Disordered Region (DISOPRED)
MILPFCSNKILIPIPNSSPFFSRRASLVTLLYLFVISSFLFSFSLLKE*************PVPTKKRNNIAIQYFDMNLN**********************RLPHIFTRVLELPFRSDADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIR**********DELELDMWRFRLPESTRPELASAVFEDGELIVTVPK************************RGGGQE*MPSAPGNGGTCTISSTELFSIASLAALTLFPLHKNVSTMLARI*
Disordered Region (DISEMBL)
MILPFCSNKILIPIPNSSPFFSRRASLVTLLYLFVISSFLFSFSLLKESKKLEEETTMKVHPVPTKKRNNIAIQYFDMNLNNFNSNLRNPQNLSTGFHNKKLRRLPHIFTRVLELPFRSDADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWRFRLPESTRPELASAVFEDGELIVTVPKGGGLEGLEE*********SENGEFRGGGQEFMPSAPGNGGTCTISSTELFSIASLAALTLFPLHKNVSTMLARIT
Disordered Region (DISPRO)
*ILPFCSNKILIPIPNSSPFFSRRASLVTLLYLFVISSFLFSFSLLKESKKLEEETTMKVHPVPTKKRNNIAIQYFDMNLN*******************KLRRLPHIFTRVLELPFRSDADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWRFRLPESTRPELASAVFEDGELIVTVPKGG***************************EFMPS***NGGTCTISSTELFSIASLAALTLFPLHKNVSTMLARIT
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MILPFCSNKILIPIPNSSPFFSRRASLVTLLYLFVISSFLFSFSLLKESKKLEEETTMKVHPVPTKKRNNIAIQYFDMNLNNFNSNLRNPQNLSTGFHNKKLRRLPHIFTRVLELPFRSDADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWRFRLPESTRPELASAVFEDGELIVTVPKGGGLEGLEERDGGGGGDGSENGEFRGGGQEFMPSAPGNGGTCTISSTELFSIASLAALTLFPLHKNVSTMLARIT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
255552155	175	conserved hypothetical protein [Ricinus	0.567	0.914	0.717	2e-61
224108027	153	predicted protein [Populus trichocarpa]	0.503	0.928	0.715	6e-52
224102075	144	predicted protein [Populus trichocarpa]	0.503	0.986	0.681	8e-52
224147087	144	predicted protein [Populus trichocarpa]	0.503	0.986	0.675	6e-51
356575861	194	PREDICTED: uncharacterized protein LOC10	0.496	0.721	0.707	2e-50
356536003	194	PREDICTED: uncharacterized protein LOC10	0.496	0.721	0.701	4e-50
449432696	240	PREDICTED: uncharacterized protein LOC10	0.730	0.858	0.527	4e-49
449517515	240	PREDICTED: uncharacterized LOC101205778	0.726	0.854	0.534	3e-48
297737068	213	unnamed protein product [Vitis vinifera]	0.503	0.666	0.677	5e-48
225432694	168	PREDICTED: uncharacterized protein LOC10	0.5	0.839	0.675	1e-47

>gi|255552155|ref|XP_002517122.1| conserved hypothetical protein [Ricinus communis] gi|223543757|gb|EEF45285.1| conserved hypothetical protein [Ricinus communis]

 Score =  241 bits (616), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 127/177 (71%), Positives = 141/177 (79%), Gaps = 17/177 (9%)

Query: 58  MKVHPVPTKKRNNIAIQYFDMNLNNFNSNLRNPQNLSTGFHNKKLRRLPHIFTRVLELPF 117
           MKVHP+P KKRNNI IQY+  N+NN     R+P   S G HNKKLRRLPHIF+RVLELPF
Sbjct: 1   MKVHPMP-KKRNNITIQYYTNNINN----RRDPS--SGGSHNKKLRRLPHIFSRVLELPF 53

Query: 118 RSDADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELD 177
           RSDADV+VEESPD F+FVAETD +GE+RAH +EIHPGVTKIVIRPNG +ELS  D+LELD
Sbjct: 54  RSDADVSVEESPDCFRFVAETDNIGEIRAHTIEIHPGVTKIVIRPNGYLELSPFDDLELD 113

Query: 178 MWRFRLPESTRPELASAVFEDGELIVTVPKGGGLEGLEERDGGGGGDGSENGEFRGG 234
           MWRFRLPESTRPELASAV  DGELIVTVPKG  +E     +G G      NGEFRGG
Sbjct: 114 MWRFRLPESTRPELASAVLTDGELIVTVPKGDEVE-----EGNGN-----NGEFRGG 160

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224108027|ref|XP_002314693.1| predicted protein [Populus trichocarpa] gi|222863733|gb|EEF00864.1| predicted protein [Populus trichocarpa]

 Score =  210 bits (534), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 108/151 (71%), Positives = 125/151 (82%), Gaps = 9/151 (5%)

Query: 58  MKVHPVPTKKRNNIAIQYFDMNLNNFNSNLRNPQNLSTGFHNKKLRRLPHIFTRVLELPF 117
           MKVHP+P KKRNNI IQ++D   +   S+       S G  +KKLRRLPHIF+RVLELPF
Sbjct: 1   MKVHPLP-KKRNNITIQFYDHRGDPLVSS-------SGGSQHKKLRRLPHIFSRVLELPF 52

Query: 118 RSDADVAVEESPDYFKFVAETDG-MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELEL 176
           RSDADV+VEE+PD F+FVAETD  +GEVRAH VEI+PGVTKIVIRPNG +++S LD+LEL
Sbjct: 53  RSDADVSVEENPDCFRFVAETDNNIGEVRAHTVEIYPGVTKIVIRPNGYLDISPLDDLEL 112

Query: 177 DMWRFRLPESTRPELASAVFEDGELIVTVPK 207
           DMWRFRLPE+TRPELASAV  DGELIVTVPK
Sbjct: 113 DMWRFRLPETTRPELASAVLADGELIVTVPK 143

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224102075|ref|XP_002312535.1| predicted protein [Populus trichocarpa] gi|222852355|gb|EEE89902.1| predicted protein [Populus trichocarpa]

 Score =  209 bits (533), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 107/157 (68%), Positives = 125/157 (79%), Gaps = 15/157 (9%)

Query: 58  MKVHPVPTKKRNNIAIQYFDMNLNNFNSNLRNPQNLSTGFHNKKLRRLPHIFTRVLELPF 117
           MKVHP+P K+  NI IQ++ +  +            + GF NKKLRRLPHIF+R+LELPF
Sbjct: 1   MKVHPLPKKR--NITIQFYPLTSS------------AGGFQNKKLRRLPHIFSRILELPF 46

Query: 118 RSDADVAVEESPDYFKFVAETD-GMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELEL 176
           RSDADV+VEE+PD F+FVAETD  +G++RAH VEIHPGV KIVIRPNG +ELSSLD+LEL
Sbjct: 47  RSDADVSVEENPDCFRFVAETDDNIGDMRAHTVEIHPGVIKIVIRPNGYLELSSLDDLEL 106

Query: 177 DMWRFRLPESTRPELASAVFEDGELIVTVPKGGGLEG 213
           DMWRFRLPE+TRPELASAV  DGELIVTVPKG G  G
Sbjct: 107 DMWRFRLPETTRPELASAVLADGELIVTVPKGEGEGG 143

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224147087|ref|XP_002336405.1| predicted protein [Populus trichocarpa] gi|222834920|gb|EEE73369.1| predicted protein [Populus trichocarpa]

 Score =  207 bits (526), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 106/157 (67%), Positives = 124/157 (78%), Gaps = 15/157 (9%)

Query: 58  MKVHPVPTKKRNNIAIQYFDMNLNNFNSNLRNPQNLSTGFHNKKLRRLPHIFTRVLELPF 117
           MKVHP+P K+  NI IQ++ +  +            + G  NKKLRRLPHIF+R+LELPF
Sbjct: 1   MKVHPLPKKR--NITIQFYPLTSS------------AGGSQNKKLRRLPHIFSRILELPF 46

Query: 118 RSDADVAVEESPDYFKFVAETD-GMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELEL 176
           RSDADV+VEE+PD F+FVAETD  +G++RAH VEIHPGV KIVIRPNG +ELSSLD+LEL
Sbjct: 47  RSDADVSVEENPDCFRFVAETDDNIGDMRAHTVEIHPGVIKIVIRPNGYLELSSLDDLEL 106

Query: 177 DMWRFRLPESTRPELASAVFEDGELIVTVPKGGGLEG 213
           DMWRFRLPE+TRPELASAV  DGELIVTVPKG G  G
Sbjct: 107 DMWRFRLPETTRPELASAVLADGELIVTVPKGEGEGG 143

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575861|ref|XP_003556055.1| PREDICTED: uncharacterized protein LOC100808440 [Glycine max]

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/154 (70%), Positives = 122/154 (79%), Gaps = 14/154 (9%)

Query: 58  MKVHPVPTKKRNNIAIQYFDMNLNNFNSNLRNPQNLST---GFHNKKLRRLPHIFTRVLE 114
           MKVHPVP K+  NI+IQ        F  +  NP + +    G   KKLRRLPH+F+ VLE
Sbjct: 30  MKVHPVPRKR--NISIQ--------FGGDGGNPMSEAQALLGIAGKKLRRLPHVFSCVLE 79

Query: 115 LPFRSDADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDEL 174
           LPFRSDADVAVEE+PD F+FVAETDG+G+VRAH VEIHPGVTKIV+R  G VEL SLD+L
Sbjct: 80  LPFRSDADVAVEEAPDCFRFVAETDGIGDVRAHTVEIHPGVTKIVVRDGGSVEL-SLDQL 138

Query: 175 ELDMWRFRLPESTRPELASAVFEDGELIVTVPKG 208
           ELDMWRFRLPESTRPELASAVF DGELIVTVPKG
Sbjct: 139 ELDMWRFRLPESTRPELASAVFVDGELIVTVPKG 172

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356536003|ref|XP_003536530.1| PREDICTED: uncharacterized protein LOC100778094 [Glycine max]

 Score =  204 bits (518), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 108/154 (70%), Positives = 123/154 (79%), Gaps = 14/154 (9%)

Query: 58  MKVHPVPTKKRNNIAIQYFDMNLNNFNSNLRNPQNLST---GFHNKKLRRLPHIFTRVLE 114
           MKVHPVP K+  NI+IQ        F  +  NP + +    G   KKLRRLPH+F+ VLE
Sbjct: 30  MKVHPVPRKR--NISIQ--------FGGDGGNPMSEAQALLGIAGKKLRRLPHVFSCVLE 79

Query: 115 LPFRSDADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDEL 174
           LPFRSDADVAVEE+P++F+FVAETDG+G+VRAH VEIHPGVTKIV+R  G VEL SLD+L
Sbjct: 80  LPFRSDADVAVEEAPNFFRFVAETDGIGDVRAHTVEIHPGVTKIVVREGGSVEL-SLDQL 138

Query: 175 ELDMWRFRLPESTRPELASAVFEDGELIVTVPKG 208
           ELDMWRFRLPESTRPELASAVF DGELIVTVPKG
Sbjct: 139 ELDMWRFRLPESTRPELASAVFVDGELIVTVPKG 172

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432696|ref|XP_004134135.1| PREDICTED: uncharacterized protein LOC101205778 [Cucumis sativus]

 Score =  201 bits (510), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/235 (52%), Positives = 149/235 (63%), Gaps = 29/235 (12%)

Query: 4   PFCSNKILIPIP-NSSPFFSRRASLVTLLYLFVISSFLF----------SFSLLKESKKL 52
           P  SN I I IP    P F  RAS ++L    +   F+             + LK   ++
Sbjct: 7   PLNSNPIKISIPFEIRPSFFTRASSISLSIWVLTLVFIVVGGVSPAPSKPIASLKNEFEI 66

Query: 53  EEETTMKVHPVPTKKRNNIAIQYFDMNLNNFNSNLRNP-QNLSTGFHNKKLRRLPHIFTR 111
              T MKVHP+P K+  NIA++         N+ LRN  ++ S   ++KKLRRLPHIF+R
Sbjct: 67  NSTTAMKVHPLPRKR--NIAVRN--------NTTLRNSLEDQSLLNNHKKLRRLPHIFSR 116

Query: 112 VLELPFRSDADVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELS 169
           VLELPFRSDADV VEE+PD F+F+AETDG     VRAH VEIHPGV KIV+R N  +E+ 
Sbjct: 117 VLELPFRSDADVLVEENPDCFRFIAETDGNISDGVRAHAVEIHPGVIKIVVRENESLEM- 175

Query: 170 SLDELELDMWRFRLPESTRPELASAVFEDGELIVTVPKGGGLEGLEERDGGGGGD 224
           S+DELELDMWRFRLPE+TRPELASA F DGELIVTVPKG      E     GGGD
Sbjct: 176 SIDELELDMWRFRLPETTRPELASAAFVDGELIVTVPKGND----EGNSDDGGGD 226

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449517515|ref|XP_004165791.1| PREDICTED: uncharacterized LOC101205778 [Cucumis sativus]

 Score =  198 bits (503), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/232 (53%), Positives = 150/232 (64%), Gaps = 27/232 (11%)

Query: 4   PFCSNKILIPIP-NSSPFFSRRASLVTLLYLFVISSFLF----------SFSLLKESKKL 52
           P  SN I I IP    P F  RAS ++L    +   F+             + LK   ++
Sbjct: 7   PLNSNPIKISIPFEIRPSFFTRASSISLSIWVLTLVFIVVGGVSPAPSKPIASLKNEFEI 66

Query: 53  EEETTMKVHPVPTKKRNNIAIQYFDMNLNNFNSNLRNP-QNLSTGFHNKKLRRLPHIFTR 111
              T MKVHP+P K+  NIA++         N+  RN  ++ S   ++KKLRRLPHIF+R
Sbjct: 67  NSTTAMKVHPLPRKR--NIAVRN--------NTTSRNSLEDQSLLNNHKKLRRLPHIFSR 116

Query: 112 VLELPFRSDADVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELS 169
           VLELPFRSDADV VEE+PD F+F+AETDG     VRAH VEIHPGV KIV+R N  +E+ 
Sbjct: 117 VLELPFRSDADVLVEENPDCFRFIAETDGNISDGVRAHAVEIHPGVIKIVVRENESLEM- 175

Query: 170 SLDELELDMWRFRLPESTRPELASAVFEDGELIVTVPKGGGLEGLEERDGGG 221
           S+DELELDMWRFRLPE+TRPELASA F DGELIVTVPKG   EG  + DGGG
Sbjct: 176 SIDELELDMWRFRLPETTRPELASAAFVDGELIVTVPKGND-EGNSD-DGGG 225

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297737068|emb|CBI26269.3| unnamed protein product [Vitis vinifera]

 Score =  197 bits (500), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 103/152 (67%), Positives = 121/152 (79%), Gaps = 10/152 (6%)

Query: 57  TMKVHPVPTKKRNNIAIQYFDMNLNNFNSNLRNP-QNLSTGFHNKKLRRLPHIFTRVLEL 115
           TMKVHPV  +K+ NI  +Y        NSNL +P ++   G   KKLRRLPHIF+RVLEL
Sbjct: 52  TMKVHPV--QKKRNITFRY------EINSNLSDPLRDRLMGSTQKKLRRLPHIFSRVLEL 103

Query: 116 PFRSDADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELE 175
           PF+SDADVAVEES D F+FVA TDG+G++RAH VEIHPGVTKIVIR +  VEL ++DELE
Sbjct: 104 PFKSDADVAVEESSDCFRFVAVTDGIGDIRAHTVEIHPGVTKIVIRGSDVVEL-TMDELE 162

Query: 176 LDMWRFRLPESTRPELASAVFEDGELIVTVPK 207
           LDMWRFRLP +TRPELASAV+ DGEL+VTVPK
Sbjct: 163 LDMWRFRLPATTRPELASAVYVDGELVVTVPK 194

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432694|ref|XP_002282665.1| PREDICTED: uncharacterized protein LOC100256202 [Vitis vinifera]

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 102/151 (67%), Positives = 120/151 (79%), Gaps = 10/151 (6%)

Query: 58  MKVHPVPTKKRNNIAIQYFDMNLNNFNSNLRNP-QNLSTGFHNKKLRRLPHIFTRVLELP 116
           MKVHPV  +K+ NI  +Y        NSNL +P ++   G   KKLRRLPHIF+RVLELP
Sbjct: 1   MKVHPV--QKKRNITFRY------EINSNLSDPLRDRLMGSTQKKLRRLPHIFSRVLELP 52

Query: 117 FRSDADVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELEL 176
           F+SDADVAVEES D F+FVA TDG+G++RAH VEIHPGVTKIVIR +  VEL ++DELEL
Sbjct: 53  FKSDADVAVEESSDCFRFVAVTDGIGDIRAHTVEIHPGVTKIVIRGSDVVEL-TMDELEL 111

Query: 177 DMWRFRLPESTRPELASAVFEDGELIVTVPK 207
           DMWRFRLP +TRPELASAV+ DGEL+VTVPK
Sbjct: 112 DMWRFRLPATTRPELASAVYVDGELVVTVPK 142

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
TAIR|locus:2130369	152	HSP1 "AT4G14830" [Arabidopsis	0.478	0.888	0.551	6.7e-33
TAIR|locus:2077036	198	AT3G22530 "AT3G22530" [Arabido	0.382	0.545	0.637	4.2e-31

TAIR|locus:2130369 HSP1 "AT4G14830" [Arabidopsis thaliana (taxid:3702)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 85/154 (55%), Positives = 98/154 (63%)

Query:    58 MKVHPVPTKKRNNIAIQYFDMXXXXXXXXXXXXXXXSTGFHNKKLRRLPHIFTRVLELPF 117
             MK+HP+P  + NN  I +                   T    KKLRRLPHIF+RVLELP 
Sbjct:     1 MKIHPLPRNENNNNLIHH---------------ARDPTREPGKKLRRLPHIFSRVLELPL 45

Query:   118 RSDADVAVEESPDYFKFVAETDGMGE--VRAHMVEIHPGVTKIVIRPNGCVXXXXXXXXX 175
             +SDADVAVEES D F+FVAETDG G   VRA+MVEIHPGVTKI++R NG           
Sbjct:    46 KSDADVAVEESHDCFRFVAETDGGGGGGVRAYMVEIHPGVTKILVRTNGSSSLGLSLDEL 105

Query:   176 XX-MWRFRLPESTRPELASAVFE-DGELIVTVPK 207
                +WRFRLPESTRPEL +   + DGELIVTVPK
Sbjct:   106 ELDVWRFRLPESTRPELVTVDCDGDGELIVTVPK 139

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2077036 AT3G22530 "AT3G22530" [Arabidopsis thaliana (taxid:3702)]

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 72/113 (63%), Positives = 82/113 (72%)

Query:   100 KKLRRLPHIFTRVLELPFRSDADVAVEESPDYFKFVAETDGM----GEVRAHMVEIHPGV 155
             K LRRLPHIF RVLELP RS+ADVAVEE  D F+FVAET G+    GE+RA+MVEIHPG+
Sbjct:    59 KNLRRLPHIFNRVLELPLRSEADVAVEERHDCFRFVAETVGLCNGDGEMRAYMVEIHPGI 118

Query:   156 TKIVIRPNGCVXXXXXXXXXXX-MWRFRLPESTRPELASAVFEDGELIVTVPK 207
             TKIV+R NG              +WRFRLPESTRPEL +    DG+LIVTVPK
Sbjct:   119 TKIVVRTNGSSSLGLSLDELELDVWRFRLPESTRPELVTVACVDGDLIVTVPK 171


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.138   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      282       209   0.00079  112 3  11 22  0.44    32
                                                     31  0.48    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  586 (62 KB)
  Total size of DFA:  156 KB (2094 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.78u 0.11s 14.89t   Elapsed:  00:00:01
  Total cpu time:  14.78u 0.11s 14.89t   Elapsed:  00:00:01
  Start:  Fri May 10 03:24:50 2013   End:  Fri May 10 03:24:51 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005774 "vacuolar membrane" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.X.5855.1 hypothetical protein (153 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	282
cd06464	88	cd06464, ACD_sHsps-like, Alpha-crystallin domain (	5e-04
cd00298	80	cd00298, ACD_sHsps_p23-like, This domain family in	0.003
PRK06958	182	PRK06958, PRK06958, single-stranded DNA-binding pr	0.004

>gnl|CDD|107221 cd06464, ACD_sHsps-like, Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 180 RFRLPESTRPELASAVFEDGELIVTVPK 207
            FRLPE   P+   A  E+G L +T+PK
Sbjct: 61  SFRLPEDVDPDKIKASLENGVLTITLPK 88

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. Length = 88

>gnl|CDD|107219 cd00298, ACD_sHsps_p23-like, This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins

 Score = 35.6 bits (83), Expect = 0.003
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 15/89 (16%)

Query: 125 VEESPDYFKFVAETDGMG--EVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELD----M 178
             ++ D      +  G+   +++   VE+   V  + I      +    +E E       
Sbjct: 1   WYQTDDEVVVTVDLPGVKKEDIK---VEVEDNV--LTIS----GKREEEEERERSYGEFE 51

Query: 179 WRFRLPESTRPELASAVFEDGELIVTVPK 207
             F LPE   PE + A  E+G L +T+PK
Sbjct: 52  RSFELPEDVDPEKSKASLENGVLEITLPK 80

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind1), NUD (nuclear distribution) C, Melusin, and NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR). Length = 80

>gnl|CDD|180777 PRK06958, PRK06958, single-stranded DNA-binding protein; Provisional

 Score = 37.1 bits (86), Expect = 0.004
 Identities = 14/39 (35%), Positives = 15/39 (38%)

Query: 208 GGGLEGLEERDGGGGGDGSENGEFRGGGQEFMPSAPGNG 246
           GGG  G     GGGG      G   GGG     +  G G
Sbjct: 134 GGGYGGESRSGGGGGRASGGGGGGAGGGASRPSAPAGGG 172

Length = 182

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	282
cd06472	92	ACD_ScHsp26_like Alpha crystallin domain (ACD) fou	99.65
KOG0710	196	consensus Molecular chaperone (small heat-shock pr	99.63
cd06497	86	ACD_alphaA-crystallin_HspB4 Alpha-crystallin domai	99.55
cd06471	93	ACD_LpsHSP_like Group of bacterial proteins contai	99.53
PF00011	102	HSP20: Hsp20/alpha crystallin family This prints e	99.52
cd06478	83	ACD_HspB4-5-6 Alpha-crystallin domain found in alp	99.48
PRK10743	137	heat shock protein IbpA; Provisional	99.46
COG0071	146	IbpA Molecular chaperone (small heat shock protein	99.46
cd06479	81	ACD_HspB7_like Alpha crystallin domain (ACD) found	99.43
cd06475	86	ACD_HspB1_like Alpha crystallin domain (ACD) found	99.39
cd06498	84	ACD_alphaB-crystallin_HspB5 Alpha-crystallin domai	99.39
PRK11597	142	heat shock chaperone IbpB; Provisional	99.39
cd06464	88	ACD_sHsps-like Alpha-crystallin domain (ACD) of al	99.36
cd06470	90	ACD_IbpA-B_like Alpha-crystallin domain (ACD) foun	99.36
cd06476	83	ACD_HspB2_like Alpha crystallin domain (ACD) found	99.3
cd06526	83	metazoan_ACD Alpha-crystallin domain (ACD) of meta	99.29
cd06477	83	ACD_HspB3_Like Alpha crystallin domain (ACD) found	99.26
cd06481	87	ACD_HspB9_like Alpha crystallin domain (ACD) found	99.21
cd06482	87	ACD_HspB10 Alpha crystallin domain (ACD) found in	98.9
cd00298	80	ACD_sHsps_p23-like This domain family includes the	98.89
cd06480	91	ACD_HspB8_like Alpha-crystallin domain (ACD) found	98.53
KOG3591	173	consensus Alpha crystallins [Posttranslational mod	98.12
cd06469	78	p23_DYX1C1_like p23_like domain found in proteins	98.0
cd06463	84	p23_like Proteins containing this p23_like domain	97.7
PF05455	177	GvpH: GvpH; InterPro: IPR008633 This family consis	97.52
cd06466	84	p23_CS_SGT1_like p23_like domain similar to the C-	96.83
PF04969	79	CS: CS domain; InterPro: IPR017447 The function of	95.34
PF08190	328	PIH1: pre-RNA processing PIH1/Nop17	92.63
cd06467	85	p23_NUDC_like p23_like domain of NUD (nuclear dist	82.16
cd06465	108	p23_hB-ind1_like p23_like domain found in human (h	82.15

>cd06472 ACD_ScHsp26_like Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins

Probab=99.65  E-value=4.7e-16  Score=117.57  Aligned_cols=81  Identities=28%  Similarity=0.417  Sum_probs=63.1

Q ss_pred             ccceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccc---------cccccCCeeeeecCCCCCcc
Q 023450          122 DVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSS---------LDELELDMWRFRLPESTRPE  190 (282)
Q Consensus       122 dVDVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~d---------edE~e~DkWRFRLPENA~pE  190 (282)
                      +|||.|+.++|+..+|+||  ++++++++   +++  ++|.+.|++.....         |........+|+||++++++
T Consensus         1 ~~dv~E~~~~~~i~~~lPGv~~edi~i~v---~~~--~~L~I~g~~~~~~~~~~~~~~~~e~~~g~f~r~i~LP~~v~~~   75 (92)
T cd06472           1 RVDWKETPEAHVFKADVPGVKKEDVKVEV---EDG--RVLRISGERKKEEEKKGDDWHRVERSSGRFVRRFRLPENADAD   75 (92)
T ss_pred             CccEEEcCCeEEEEEECCCCChHhEEEEE---eCC--CEEEEEEEecccccccCCCEEEEEEeccEEEEEEECCCCCCHH
Confidence            5899999999999999999  79999995   554  56766665532100         11112223379999999999


Q ss_pred             ceeeEeeCCeEEEEeeC
Q 023450          191 LASAVFEDGELIVTVPK  207 (282)
Q Consensus       191 ~VsA~~eDGVLTVTVPK  207 (282)
                      .|+|.|+||+|+||+||
T Consensus        76 ~i~A~~~nGvL~I~lPK   92 (92)
T cd06472          76 EVKAFLENGVLTVTVPK   92 (92)
T ss_pred             HCEEEEECCEEEEEecC
Confidence            99999999999999998

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. ScHsp26 is temperature-regulated, it switches from an inactive to a chaperone-active form upon elevation in temperature. It associates into large 24-mers storage forms which upon heat shock disassociate into dimers. These dimers initiate the interaction with non-native substrate proteins and re-assemble into large globular assemblies having one monomer of substrate bound per dimer. This group also contains Arabidopsis thaliana (Ath) Hsp15.7, a peroxisomal matrix protein which can complement the morphological phenotype of S. cerevisiae mutants deficient in Hsps26. AthHsp15.7 is minimally expressed under normal conditions and is strongly induced by heat and oxidative st

>KOG0710 consensus Molecular chaperone (small heat-shock protein Hsp26/Hsp42) [Posttranslational modification, protein turnover, chaperones]

Probab=99.63  E-value=2.8e-16  Score=135.77  Aligned_cols=93  Identities=25%  Similarity=0.281  Sum_probs=71.2

Q ss_pred             cccCCCCCccceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccccc--cccCCee----------
Q 023450          114 ELPFRSDADVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLD--ELELDMW----------  179 (282)
Q Consensus       114 ELPF~AdTdVDVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~ded--E~e~DkW----------  179 (282)
                      +.+-.+..+.+++|++++|.|++|+||  +++|||++   +++  ++++++|++... .++  +.+..+|          
T Consensus        78 ~~~~~~~~~~~v~e~~~~~~~~~~~Pgl~ke~iKv~~---~~~--~~l~isGe~~~e-~e~~~~~~~~~~~E~~~g~F~r  151 (196)
T KOG0710|consen   78 EAKSEARVPWDVKESPDAHEFKVDLPGLKKEDIKVEV---EDE--KVLTISGERKKE-EEESGSGKKWKRVERKLGKFKR  151 (196)
T ss_pred             cccccccCCcccccCCCceEEEeeCCCCCchhceEEe---ccC--cEEEEecccccc-cccccCCccceeehhcccceEe
Confidence            334444445555999999999999999  89999996   775  688888876432 111  1222233          


Q ss_pred             eeecCCCCCccceeeEeeCCeEEEEeeCCCCCC
Q 023450          180 RFRLPESTRPELASAVFEDGELIVTVPKGGGLE  212 (282)
Q Consensus       180 RFRLPENA~pE~VsA~~eDGVLTVTVPK~e~pe  212 (282)
                      +|+||+|+++|.|+|.|+||||+|+|||..+..
T Consensus       152 ~~~lPenv~~d~ikA~~~nGVL~VvvpK~~~~~  184 (196)
T KOG0710|consen  152 RFELPENVDVDEIKAEMENGVLTVVVPKLEPLL  184 (196)
T ss_pred             eecCCccccHHHHHHHhhCCeEEEEEecccccc
Confidence            899999999999999999999999999988643

>cd06497 ACD_alphaA-crystallin_HspB4 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, 20kDa)

Probab=99.55  E-value=1e-14  Score=111.50  Aligned_cols=76  Identities=20%  Similarity=0.243  Sum_probs=59.4

Q ss_pred             ceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccccccccC----CeeeeecCCCCCccceeeEe-
Q 023450          124 AVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELEL----DMWRFRLPESTRPELASAVF-  196 (282)
Q Consensus       124 DVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e~----DkWRFRLPENA~pE~VsA~~-  196 (282)
                      +++|++++|...+|+||  ++|++|++   +++   .|.+.|++.+.  +++...    ...+|+||+++++|+|+|.| 
T Consensus         4 ~v~e~~~~~~v~~dlpG~~~edi~V~v---~~~---~L~I~g~~~~~--~~~~~~~~~ef~R~~~LP~~Vd~~~i~A~~~   75 (86)
T cd06497           4 EVRSDRDKFTIYLDVKHFSPEDLTVKV---LDD---YVEIHGKHSER--QDDHGYISREFHRRYRLPSNVDQSAITCSLS   75 (86)
T ss_pred             eEEEcCCEEEEEEECCCCCHHHeEEEE---ECC---EEEEEEEEcce--eCCCCEEEEEEEEEEECCCCCChHHeEEEeC
Confidence            68999999999999999  79999996   564   56555543211  111110    34489999999999999999 


Q ss_pred             eCCeEEEEeeC
Q 023450          197 EDGELIVTVPK  207 (282)
Q Consensus       197 eDGVLTVTVPK  207 (282)
                      +||+|+||+||
T Consensus        76 ~dGvL~I~~PK   86 (86)
T cd06497          76 ADGMLTFSGPK   86 (86)
T ss_pred             CCCEEEEEecC
Confidence            89999999998

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 does not belong to this group. Mutations inHspB4 have been associated with Autosomal Dominant Congenital Cataract (ADCC). The chaperone-like functions of HspB4 are considered important for maintaining lens transparency and preventing cataract.

>cd06471 ACD_LpsHSP_like Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18

Probab=99.53  E-value=3.2e-14  Score=107.00  Aligned_cols=79  Identities=22%  Similarity=0.278  Sum_probs=59.5

Q ss_pred             ccceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccccc-----------cccCCeeeeecCCCCC
Q 023450          122 DVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLD-----------ELELDMWRFRLPESTR  188 (282)
Q Consensus       122 dVDVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~ded-----------E~e~DkWRFRLPENA~  188 (282)
                      .|||.|+.++|++.+|+||  +++|+|++   +++   .|.+.+++.....+.           .......+|+|| +++
T Consensus         2 ~~di~e~~~~~~i~~~lPGv~~edi~v~~---~~~---~L~I~g~~~~~~~~~~~~~~~~~~e~~~g~f~r~~~lp-~v~   74 (93)
T cd06471           2 KTDIKETDDEYIVEADLPGFKKEDIKLDY---KDG---YLTISAKRDESKDEKDKKGNYIRRERYYGSFSRSFYLP-NVD   74 (93)
T ss_pred             ceeEEEcCCEEEEEEECCCCCHHHeEEEE---ECC---EEEEEEEEccccccccccCCEEEEeeeccEEEEEEECC-CCC
Confidence            5899999999999999999  79999986   553   455555443210010           111123368998 799


Q ss_pred             ccceeeEeeCCeEEEEeeC
Q 023450          189 PELASAVFEDGELIVTVPK  207 (282)
Q Consensus       189 pE~VsA~~eDGVLTVTVPK  207 (282)
                      ++.++|.|.||+|+||+||
T Consensus        75 ~~~i~A~~~dGvL~I~lPK   93 (93)
T cd06471          75 EEEIKAKYENGVLKITLPK   93 (93)
T ss_pred             HHHCEEEEECCEEEEEEcC
Confidence            9999999999999999998

5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic me

>PF00011 HSP20: Hsp20/alpha crystallin family This prints entry is a subset of the Pfam entry

Probab=99.52  E-value=6.5e-14  Score=105.48  Aligned_cols=84  Identities=21%  Similarity=0.329  Sum_probs=60.2

Q ss_pred             ceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccc-------cccccCCeeeeecCCCCCccceee
Q 023450          124 AVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSS-------LDELELDMWRFRLPESTRPELASA  194 (282)
Q Consensus       124 DVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~d-------edE~e~DkWRFRLPENA~pE~VsA  194 (282)
                      ||.|+.++|...+|+||  ++++++++   +++  . |++.+.+.....       +.......++|+||++++++.++|
T Consensus         1 di~e~~~~~~i~~~lpG~~~edi~I~~---~~~--~-L~I~g~~~~~~~~~~~~~~~~~~~~f~r~~~lP~~vd~~~i~a   74 (102)
T PF00011_consen    1 DIKEDEDEYIIKVDLPGFDKEDIKIKV---DDN--K-LVISGKRKEEEEDDRYYRSERRYGSFERSIRLPEDVDPDKIKA   74 (102)
T ss_dssp             EEEESSSEEEEEEE-TTS-GGGEEEEE---ETT--E-EEEEEEEEGEECTTCEEEE-S-SEEEEEEEE-STTB-GGG-EE
T ss_pred             CeEECCCEEEEEEECCCCChHHEEEEE---ecC--c-cceeceeeeeeeeeeeeecccccceEEEEEcCCCcCCcceEEE
Confidence            89999999999999999  79999996   665  3 444544331100       111233345899999999999999


Q ss_pred             EeeCCeEEEEeeCCCCCCC
Q 023450          195 VFEDGELIVTVPKGGGLEG  213 (282)
Q Consensus       195 ~~eDGVLTVTVPK~e~pe~  213 (282)
                      .|+||+|+|++||.+..+.
T Consensus        75 ~~~~GvL~I~~pk~~~~~~   93 (102)
T PF00011_consen   75 SYENGVLTITIPKKEEEED   93 (102)
T ss_dssp             EETTSEEEEEEEBSSSCTT
T ss_pred             EecCCEEEEEEEccccccC
Confidence            9999999999999886654

; InterPro: IPR002068 Prokaryotic and eukaryotic organisms respond to heat shock or other environmental stress by inducing the synthesis of proteins collectively known as heat-shock proteins (hsp) []. Amongst them is a family of proteins with an average molecular weight of 20 Kd, known as the hsp20 proteins []. These seem to act as chaperones that can protect other proteins against heat-induced denaturation and aggregation. Hsp20 proteins seem to form large heterooligomeric aggregates. Structurally, this family is characterised by the presence of a conserved C-terminal domain of about 100 residues.; PDB: 2BOL_B 3N3E_B 2H50_P 2H53_F 2BYU_L 1GME_D 3VQM_J 3VQK_E 3VQL_A 3AAC_A ....

>cd06478 ACD_HspB4-5-6 Alpha-crystallin domain found in alphaA-crystallin (HspB4), alphaB-crystallin (HspB5), and the small heat shock protein (sHsp) HspB6, also known as Hsp20

Probab=99.48  E-value=7.8e-14  Score=105.62  Aligned_cols=75  Identities=23%  Similarity=0.264  Sum_probs=57.4

Q ss_pred             eeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCccccccccccc----CCeeeeecCCCCCccceeeEe-e
Q 023450          125 VEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELE----LDMWRFRLPESTRPELASAVF-E  197 (282)
Q Consensus       125 VKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e----~DkWRFRLPENA~pE~VsA~~-e  197 (282)
                      ++++.++|+..+|+||  +++|+|++   +++   .|.+.|++...  .++..    ....+|+||++++++.|+|.| +
T Consensus         2 ~~~~~~~~~v~~dlpG~~~edI~V~v---~~~---~L~I~g~~~~~--~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~   73 (83)
T cd06478           2 VRLDKDRFSVNLDVKHFSPEELSVKV---LGD---FVEIHGKHEER--QDEHGFISREFHRRYRLPPGVDPAAITSSLSA   73 (83)
T ss_pred             eeecCceEEEEEECCCCCHHHeEEEE---ECC---EEEEEEEEceE--cCCCCEEEEEEEEEEECCCCcChHHeEEEECC
Confidence            6899999999999999  79999996   554   45545543211  11100    134489999999999999999 7


Q ss_pred             CCeEEEEeeC
Q 023450          198 DGELIVTVPK  207 (282)
Q Consensus       198 DGVLTVTVPK  207 (282)
                      ||+|+||+||
T Consensus        74 dGvL~I~~PK   83 (83)
T cd06478          74 DGVLTISGPR   83 (83)
T ss_pred             CCEEEEEecC
Confidence            9999999998

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 on the other hand is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. HspB5's functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its ol

>PRK10743 heat shock protein IbpA; Provisional

Probab=99.46  E-value=1.9e-13  Score=113.29  Aligned_cols=81  Identities=12%  Similarity=0.135  Sum_probs=61.2

Q ss_pred             Ccccee-ecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccc-------cccccCCeeeeecCCCCCcc
Q 023450          121 ADVAVE-ESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSS-------LDELELDMWRFRLPESTRPE  190 (282)
Q Consensus       121 TdVDVK-ETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~d-------edE~e~DkWRFRLPENA~pE  190 (282)
                      .++|+. |+.++|+..||+||  +++|+|+|   ++|   +|.+.|++....+       |........+|+||++++.|
T Consensus        35 p~~di~ee~~~~~~v~aelPGv~kedi~V~v---~~~---~LtI~ge~~~~~~~~~~~~~Er~~g~F~R~~~LP~~Vd~~  108 (137)
T PRK10743         35 PPYNVELVDENHYRIAIAVAGFAESELEITA---QDN---LLVVKGAHADEQKERTYLYQGIAERNFERKFQLAENIHVR  108 (137)
T ss_pred             CcEEEEEcCCCEEEEEEECCCCCHHHeEEEE---ECC---EEEEEEEECccccCCcEEEEEEECCEEEEEEECCCCcccC
Confidence            569999 58999999999999  89999996   664   5666665432100       11112233389999999999


Q ss_pred             ceeeEeeCCeEEEEeeCCC
Q 023450          191 LASAVFEDGELIVTVPKGG  209 (282)
Q Consensus       191 ~VsA~~eDGVLTVTVPK~e  209 (282)
                        +|.|+||||+||+||..
T Consensus       109 --~A~~~dGVL~I~lPK~~  125 (137)
T PRK10743        109 --GANLVNGLLYIDLERVI  125 (137)
T ss_pred             --cCEEeCCEEEEEEeCCC
Confidence              59999999999999964

>COG0071 IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]

Probab=99.46  E-value=3.4e-13  Score=110.16  Aligned_cols=98  Identities=27%  Similarity=0.371  Sum_probs=71.4

Q ss_pred             chhhhhhcccCC---CCCccceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCccccccccc--------
Q 023450          107 HIFTRVLELPFR---SDADVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDE--------  173 (282)
Q Consensus       107 HVFsrVLELPF~---AdTdVDVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE--------  173 (282)
                      ++|.-...++..   ..-+||+.|+.+.|+.++|+||  +++|++++   +++   .|.+.+++.+. .+.+        
T Consensus        24 ~~~~~~~~~~~~~~~~~P~vdi~e~~~~~~I~~elPG~~kedI~I~~---~~~---~l~I~g~~~~~-~~~~~~~~~~~e   96 (146)
T COG0071          24 RLFREFGNLPESRPTGTPPVDIEETDDEYRITAELPGVDKEDIEITV---EGN---TLTIRGEREEE-EEEEEEGYLRRE   96 (146)
T ss_pred             hhhhhhhcccccccCCCCcEEEEEcCCEEEEEEEcCCCChHHeEEEE---ECC---EEEEEEEeccc-ccccCCceEEEE
Confidence            344444444444   3458999999999999999999  89999996   664   35555544321 1111        


Q ss_pred             --ccCCeeeeecCCCCCccceeeEeeCCeEEEEeeCCCCC
Q 023450          174 --LELDMWRFRLPESTRPELASAVFEDGELIVTVPKGGGL  211 (282)
Q Consensus       174 --~e~DkWRFRLPENA~pE~VsA~~eDGVLTVTVPK~e~p  211 (282)
                        ......+|+||+..+++.++|.|.||+|+||+||.++-
T Consensus        97 ~~~~~f~r~~~Lp~~v~~~~~~A~~~nGvL~I~lpk~~~~  136 (146)
T COG0071          97 RAYGEFERTFRLPEKVDPEVIKAKYKNGLLTVTLPKAEPE  136 (146)
T ss_pred             EEeeeEEEEEECcccccccceeeEeeCcEEEEEEeccccc
Confidence              22223389999999999999999999999999998754

>cd06479 ACD_HspB7_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB7, also known as cardiovascular small heat shock protein (cvHsp), and similar proteins

Probab=99.43  E-value=1.9e-13  Score=104.68  Aligned_cols=77  Identities=16%  Similarity=0.231  Sum_probs=60.8

Q ss_pred             ceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccccccccCCeeeeecCCCCCccceeeEe-eCCe
Q 023450          124 AVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWRFRLPESTRPELASAVF-EDGE  200 (282)
Q Consensus       124 DVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e~DkWRFRLPENA~pE~VsA~~-eDGV  200 (282)
                      |+.|++++|...+|+||  ++|++|+|   +++   .|.+.++++.. +.........+|.||++.++|.|+|.| +||+
T Consensus         2 ~v~e~~~~~~v~~dlpG~~pedi~V~v---~~~---~L~I~ger~~~-~~~~~g~F~R~~~LP~~vd~e~v~A~l~~~Gv   74 (81)
T cd06479           2 NVKTLGDTYQFAVDVSDFSPEDIIVTT---SNN---QIEVHAEKLAS-DGTVMNTFTHKCQLPEDVDPTSVSSSLGEDGT   74 (81)
T ss_pred             CccCcCCeEEEEEECCCCCHHHeEEEE---ECC---EEEEEEEEecc-CCCEEEEEEEEEECCCCcCHHHeEEEecCCCE
Confidence            68899999999999999  79999996   664   45556654321 122233445699999999999999997 9999


Q ss_pred             EEEEeeC
Q 023450          201 LIVTVPK  207 (282)
Q Consensus       201 LTVTVPK  207 (282)
                      |+||+++
T Consensus        75 L~I~~~~   81 (81)
T cd06479          75 LTIKARR   81 (81)
T ss_pred             EEEEecC
Confidence            9999985

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB7 is a 25-kDa protein, preferentially expressed in heart and skeletal muscle. It binds the cytoskeleton protein alpha-filamin (also known as actin-binding protein 280). The expression of HspB7 is increased during rat muscle aging. Its expression is also modulated in obesity implicating this protein in this and related metabolic disorders. As the human gene encoding HspB7 is mapped to chromosome 1p36.23-p34.3 it is a positional candidate for several dystrophies and myopathies.

>cd06475 ACD_HspB1_like Alpha crystallin domain (ACD) found in mammalian small (s)heat shock protein (Hsp)-27 (also denoted HspB1 in human) and similar proteins

Probab=99.39  E-value=7e-13  Score=101.43  Aligned_cols=76  Identities=21%  Similarity=0.317  Sum_probs=58.6

Q ss_pred             cceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccccccc----cCCeeeeecCCCCCccceeeEe
Q 023450          123 VAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDEL----ELDMWRFRLPESTRPELASAVF  196 (282)
Q Consensus       123 VDVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~----e~DkWRFRLPENA~pE~VsA~~  196 (282)
                      -||.|+++.|...+|+||  +++++|++   +++   .|.+.+.+...  +++.    .....+|+||++.++|+|+|.|
T Consensus         3 ~~i~e~~~~~~v~~dlPG~~~edi~V~v---~~~---~L~I~g~~~~~--~~~~~~~~~~f~R~f~LP~~vd~~~v~A~~   74 (86)
T cd06475           3 SEIRQTADRWKVSLDVNHFAPEELVVKT---KDG---VVEITGKHEEK--QDEHGFVSRCFTRKYTLPPGVDPTAVTSSL   74 (86)
T ss_pred             ceEEEcCCeEEEEEECCCCCHHHEEEEE---ECC---EEEEEEEECcC--cCCCCEEEEEEEEEEECCCCCCHHHcEEEE
Confidence            379999999999999999  89999996   554   45545543321  1111    1123389999999999999999


Q ss_pred             e-CCeEEEEee
Q 023450          197 E-DGELIVTVP  206 (282)
Q Consensus       197 e-DGVLTVTVP  206 (282)
                      . ||+|+|++|
T Consensus        75 ~~dGvL~I~lP   85 (86)
T cd06475          75 SPDGILTVEAP   85 (86)
T ss_pred             CCCCeEEEEec
Confidence            7 999999998

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Hsp27 shows enhanced synthesis in response to stress. It is a molecular chaperone which interacts with a large number of different proteins. It is found in many types of human cells including breast, uterus, cervix, platelets and cancer cells. Hsp27 has diverse cellular functions including, chaperoning, regulation of actin polymerization, keratinocyte differentiation, regulation of inflammatory pathways in keratinocytes, and protection from oxidative stress through modulating glutathione levels. It is also a subunit of AUF1-containing protein complexes. It has been linked to several transduction pathways regulating cellular functions including differentiat

>cd06498 ACD_alphaB-crystallin_HspB5 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaB-crystallin (HspB5, 20kDa)

Probab=99.39  E-value=8.6e-13  Score=100.73  Aligned_cols=75  Identities=16%  Similarity=0.200  Sum_probs=57.4

Q ss_pred             eeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccccccccC-----CeeeeecCCCCCccceeeEee
Q 023450          125 VEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELEL-----DMWRFRLPESTRPELASAVFE  197 (282)
Q Consensus       125 VKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e~-----DkWRFRLPENA~pE~VsA~~e  197 (282)
                      ..++.++|...+|+||  ++|++|++   +++   .|.+.|++...  + +.+.     ...+|+||+++++|.|+|.|.
T Consensus         2 ~~~~~~~~~v~~dlpG~~~edi~V~v---~~~---~L~I~g~~~~~--~-~~~~~~~~eF~R~~~LP~~vd~~~i~A~~~   72 (84)
T cd06498           2 MRLEKDKFSVNLDVKHFSPEELKVKV---LGD---FIEIHGKHEER--Q-DEHGFISREFQRKYRIPADVDPLTITSSLS   72 (84)
T ss_pred             eEeCCceEEEEEECCCCCHHHeEEEE---ECC---EEEEEEEEcce--e-CCCCEEEEEEEEEEECCCCCChHHcEEEeC
Confidence            4678999999999999  79999996   553   45555543211  1 1111     344899999999999999995


Q ss_pred             -CCeEEEEeeCC
Q 023450          198 -DGELIVTVPKG  208 (282)
Q Consensus       198 -DGVLTVTVPK~  208 (282)
                       ||+|+||+||.
T Consensus        73 ~dGvL~I~lPk~   84 (84)
T cd06498          73 PDGVLTVCGPRK   84 (84)
T ss_pred             CCCEEEEEEeCC
Confidence             99999999994

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. HspB4 does not belong to this group. HspB5 shows increased synthesis in response to stress. HspB5 is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. Its functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its oligomerization and anti-apoptotic activ

>PRK11597 heat shock chaperone IbpB; Provisional

Probab=99.39  E-value=9.6e-13  Score=110.35  Aligned_cols=80  Identities=13%  Similarity=0.114  Sum_probs=59.6

Q ss_pred             ccceeec-CCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccc-------cccccCCeeeeecCCCCCccc
Q 023450          122 DVAVEES-PDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSS-------LDELELDMWRFRLPESTRPEL  191 (282)
Q Consensus       122 dVDVKET-PeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~d-------edE~e~DkWRFRLPENA~pE~  191 (282)
                      +||+.|+ .++|+..||+||  +++|.|+|   +++   .|.+.|++...++       |........+|+||++++.| 
T Consensus        34 ~vdI~e~~~~~y~v~adlPGv~kedi~V~v---~~~---~LtI~ge~~~~~~~~~~~~~Er~~g~F~R~f~LP~~vd~~-  106 (142)
T PRK11597         34 PYNIEKSDDNHYRITLALAGFRQEDLDIQL---EGT---RLTVKGTPEQPEKEVKWLHQGLVNQPFSLSFTLAENMEVS-  106 (142)
T ss_pred             cEEEEEcCCCEEEEEEEeCCCCHHHeEEEE---ECC---EEEEEEEEccccCCCcEEEEEEeCcEEEEEEECCCCcccC-
Confidence            5999985 689999999999  89999995   664   5666665432100       11112233379999999998 


Q ss_pred             eeeEeeCCeEEEEeeCCC
Q 023450          192 ASAVFEDGELIVTVPKGG  209 (282)
Q Consensus       192 VsA~~eDGVLTVTVPK~e  209 (282)
                       +|.|+||||+||+||..
T Consensus       107 -~A~~~nGVL~I~lPK~~  123 (142)
T PRK11597        107 -GATFVNGLLHIDLIRNE  123 (142)
T ss_pred             -cCEEcCCEEEEEEeccC
Confidence             79999999999999963

>cd06464 ACD_sHsps-like Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)

Probab=99.36  E-value=1.8e-12  Score=92.81  Aligned_cols=78  Identities=26%  Similarity=0.359  Sum_probs=60.1

Q ss_pred             ceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCccccc--------ccccccCCeeeeecCCCCCcccee
Q 023450          124 AVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELS--------SLDELELDMWRFRLPESTRPELAS  193 (282)
Q Consensus       124 DVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~--------dedE~e~DkWRFRLPENA~pE~Vs  193 (282)
                      |+.|+.+.|.+.+|+||  +++++|++   +++  . |++.+.+....        .+.......++|.||++++++.++
T Consensus         1 ~i~e~~~~~~i~~~lpg~~~~~i~V~v---~~~--~-l~I~g~~~~~~~~~~~~~~~~~~~~~f~r~~~LP~~vd~~~i~   74 (88)
T cd06464           1 DVYETDDAYVVEADLPGFKKEDIKVEV---EDG--V-LTISGEREEEEEEEENYLRRERSYGSFSRSFRLPEDVDPDKIK   74 (88)
T ss_pred             CcEEcCCEEEEEEECCCCCHHHeEEEE---ECC--E-EEEEEEEecccccCCcEEEEEEeCcEEEEEEECCCCcCHHHcE
Confidence            57899999999999999  78999996   553  3 44444332110        011245557799999999999999


Q ss_pred             eEeeCCeEEEEeeC
Q 023450          194 AVFEDGELIVTVPK  207 (282)
Q Consensus       194 A~~eDGVLTVTVPK  207 (282)
                      |.|.||+|+|++||
T Consensus        75 a~~~~G~L~I~~pk   88 (88)
T cd06464          75 ASLENGVLTITLPK   88 (88)
T ss_pred             EEEeCCEEEEEEcC
Confidence            99999999999998

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.

>cd06470 ACD_IbpA-B_like Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins

Probab=99.36  E-value=2.5e-12  Score=97.81  Aligned_cols=78  Identities=10%  Similarity=0.170  Sum_probs=57.5

Q ss_pred             ccceeecC-CeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccc--------cccccCCeeeeecCCCCCcc
Q 023450          122 DVAVEESP-DYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSS--------LDELELDMWRFRLPESTRPE  190 (282)
Q Consensus       122 dVDVKETP-eAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~d--------edE~e~DkWRFRLPENA~pE  190 (282)
                      ++|+.|+. ++|++.+|+||  +++++|++   +++   .|.+.|++.....        |........+|.||++++.+
T Consensus         2 ~~di~e~~~~~~~v~~~lPG~~kedi~v~~---~~~---~L~I~g~~~~~~~~~~~~~~~e~~~g~f~R~~~LP~~vd~~   75 (90)
T cd06470           2 PYNIEKTGENNYRITLAVAGFSEDDLEIEV---ENN---QLTVTGKKADEENEEREYLHRGIAKRAFERSFNLADHVKVK   75 (90)
T ss_pred             CeeeEEcCCCeEEEEEECCCCCHHHeEEEE---ECC---EEEEEEEEcccccCCCcEEEEEEeceEEEEEEECCCCceEC
Confidence            57899985 99999999999  89999996   554   4665665432200        00112223389999998765


Q ss_pred             ceeeEeeCCeEEEEeeC
Q 023450          191 LASAVFEDGELIVTVPK  207 (282)
Q Consensus       191 ~VsA~~eDGVLTVTVPK  207 (282)
                        +|.|+||+|+||+|+
T Consensus        76 --~A~~~~GvL~I~l~~   90 (90)
T cd06470          76 --GAELENGLLTIDLER   90 (90)
T ss_pred             --eeEEeCCEEEEEEEC
Confidence              999999999999986

IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. IbpA and IbpB are produced during high-level production of various heterologous proteins, specifically human prorenin, renin and bovine insulin-like growth factor 2 (bIGF-2), and are strongly associated with inclusion bodies containing these heterologous proteins. IbpA and IbpB work as an integrated system to stabilize thermally aggregated proteins in a disaggregation competent state. The chaperone activity of IbpB is also significantly elevated as the temperature increases from normal to heat shock. The high temperature results in the disassociation of 2-3-MDa IbpB oligomers into smaller approximately 6

>cd06476 ACD_HspB2_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB2/heat shock 27kDa protein 2 and similar proteins

Probab=99.30  E-value=6.5e-12  Score=96.10  Aligned_cols=76  Identities=16%  Similarity=0.181  Sum_probs=55.9

Q ss_pred             eecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccccc--cccCCeeeeecCCCCCccceeeEee-CCe
Q 023450          126 EESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLD--ELELDMWRFRLPESTRPELASAVFE-DGE  200 (282)
Q Consensus       126 KETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~ded--E~e~DkWRFRLPENA~pE~VsA~~e-DGV  200 (282)
                      +-..++|...+|+||  ++|++|++   +++   .|.+.|.+....++.  -......+|.||++++++.|+|.|. ||+
T Consensus         3 ~~~~d~y~v~~dlpG~~~edi~V~v---~~~---~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~v~A~~~~dGv   76 (83)
T cd06476           3 ESEDDKYQVFLDVCHFTPDEITVRT---VDN---LLEVSARHPQRMDRHGFVSREFTRTYILPMDVDPLLVRASLSHDGI   76 (83)
T ss_pred             eccCCeEEEEEEcCCCCHHHeEEEE---ECC---EEEEEEEEcceecCCCEEEEEEEEEEECCCCCChhhEEEEecCCCE
Confidence            445899999999999  79999996   664   465555442110000  0111244899999999999999996 999


Q ss_pred             EEEEeeC
Q 023450          201 LIVTVPK  207 (282)
Q Consensus       201 LTVTVPK  207 (282)
                      |+|++||
T Consensus        77 L~I~~Pr   83 (83)
T cd06476          77 LCIQAPR   83 (83)
T ss_pred             EEEEecC
Confidence            9999997

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB2 is preferentially and constitutively expressed in skeletal muscle and heart. HspB2 shows homooligomeric activity and forms aggregates in muscle cytosol. Although its expression is not induced by heat shock, it redistributes to the insoluble fraction in response to heat shock. In the mouse heart, HspB2 plays a role in maintaining energetic balance, by protecting cardiac energetics during ischemia/reperfusion, and allowing for increased work during acute inotropic challenge. hHspB2 [previously also known as myotonic dystrophy protein kinase (DMPK) binding protein (MKBP)] is selectively up-regulated in skeletal muscles from myotonic dystrophy patients.

>cd06526 metazoan_ACD Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps)

Probab=99.29  E-value=4.7e-12  Score=94.47  Aligned_cols=72  Identities=18%  Similarity=0.299  Sum_probs=54.4

Q ss_pred             CeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccc--cccccCCeeeeecCCCCCccceeeEeeC-CeEEEE
Q 023450          130 DYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSS--LDELELDMWRFRLPESTRPELASAVFED-GELIVT  204 (282)
Q Consensus       130 eAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~d--edE~e~DkWRFRLPENA~pE~VsA~~eD-GVLTVT  204 (282)
                      ++|...+|+||  +++|+|++   ++   +.|.+.+.+...++  ........++|+||++++++.++|.|.| |+|+|+
T Consensus         7 ~~~~v~~dlpG~~~edI~v~v---~~---~~L~I~g~~~~~~~~~~~~~~~f~r~~~LP~~vd~~~i~A~~~~~GvL~I~   80 (83)
T cd06526           7 EKFQVTLDVKGFKPEELKVKV---SD---NKLVVEGKHEEREDEHGYVSREFTRRYQLPEGVDPDSVTSSLSSDGVLTIE   80 (83)
T ss_pred             eeEEEEEECCCCCHHHcEEEE---EC---CEEEEEEEEeeeccCCCEEEEEEEEEEECCCCCChHHeEEEeCCCcEEEEE
Confidence            69999999999  89999996   55   34555555432100  0111233458999999999999999998 999999


Q ss_pred             eeC
Q 023450          205 VPK  207 (282)
Q Consensus       205 VPK  207 (282)
                      +||
T Consensus        81 ~Pk   83 (83)
T cd06526          81 APK   83 (83)
T ss_pred             ecC
Confidence            998

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.

>cd06477 ACD_HspB3_Like Alpha crystallin domain (ACD) found in mammalian HspB3, also known as heat-shock protein 27-like protein (HSPL27, 17-kDa) and similar proteins

Probab=99.26  E-value=1.1e-11  Score=95.51  Aligned_cols=77  Identities=16%  Similarity=0.185  Sum_probs=57.7

Q ss_pred             ceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCccccccccc--ccCCeeeeecCCCCCccceeeEe-eC
Q 023450          124 AVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDE--LELDMWRFRLPESTRPELASAVF-ED  198 (282)
Q Consensus       124 DVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE--~e~DkWRFRLPENA~pE~VsA~~-eD  198 (282)
                      |-.|+.+.|+..+|+||  +++|+|++   +++   .|.+.|++....++..  ......+|+||++.+++.|+|.| +|
T Consensus         1 ~~~e~~~~~~v~~dlpG~~~edI~V~v---~~~---~L~I~ge~~~~~~~~~~~~r~F~R~~~LP~~Vd~~~v~A~~~~d   74 (83)
T cd06477           1 DQEEGKPMFQILLDVVQFRPEDIIIQV---FEG---WLLIKGQHGVRMDEHGFISRSFTRQYQLPDGVEHKDLSAMLCHD   74 (83)
T ss_pred             CcccCCceEEEEEEcCCCCHHHeEEEE---ECC---EEEEEEEEccccCCCCEEEEEEEEEEECCCCcchheEEEEEcCC
Confidence            34689999999999999  89999996   664   5666665532211100  11224489999999999999997 89


Q ss_pred             CeEEEEee
Q 023450          199 GELIVTVP  206 (282)
Q Consensus       199 GVLTVTVP  206 (282)
                      |||+|+.|
T Consensus        75 GvL~I~~~   82 (83)
T cd06477          75 GILVVETK   82 (83)
T ss_pred             CEEEEEec
Confidence            99999976

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB3 is expressed in adult skeletal muscle, smooth muscle, and heart, and in several other fetal tissues. In muscle cells HspB3 forms an oligomeric 150 kDa complex with myotonic dystrophy protein kinase-binding protein (MKBP/ HspB2), this complex may comprise one of two independent muscle-cell specific chaperone systems. The expression of HspB3 is induced during muscle differentiation controlled by the myogenic factor MyoD. HspB3 may also interact with Hsp22 (HspB8).

>cd06481 ACD_HspB9_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB9 and similar proteins

Probab=99.21  E-value=2.7e-11  Score=92.90  Aligned_cols=75  Identities=16%  Similarity=0.287  Sum_probs=56.7

Q ss_pred             eecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCccccccccc-------ccCCeeeeecCCCCCccceeeEe
Q 023450          126 EESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDE-------LELDMWRFRLPESTRPELASAVF  196 (282)
Q Consensus       126 KETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE-------~e~DkWRFRLPENA~pE~VsA~~  196 (282)
                      +|..++|...+|+||  ++||+|+|   +++   .|++.+.+... .+++       ......+|+||++.+++.|+|.|
T Consensus         3 ~~~~d~~~v~~dlpG~~~edI~V~v---~~~---~L~I~g~~~~~-~~~~~~~~~~~~~~F~R~~~LP~~Vd~~~i~A~~   75 (87)
T cd06481           3 KDGKEGFSLKLDVRGFSPEDLSVRV---DGR---KLVVTGKREKK-NEDEKGSFSYEYQEFVREAQLPEHVDPEAVTCSL   75 (87)
T ss_pred             CCccceEEEEEECCCCChHHeEEEE---ECC---EEEEEEEEeee-cccCCCcEEEEeeEEEEEEECCCCcChHHeEEEe
Confidence            567899999999999  89999996   653   45555544321 1111       12234489999999999999999


Q ss_pred             -eCCeEEEEeeC
Q 023450          197 -EDGELIVTVPK  207 (282)
Q Consensus       197 -eDGVLTVTVPK  207 (282)
                       +||+|+|++|.
T Consensus        76 ~~dGvL~I~~P~   87 (87)
T cd06481          76 SPSGHLHIRAPR   87 (87)
T ss_pred             CCCceEEEEcCC
Confidence             99999999994

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB9 is expressed exclusively in the normal testis and in various tumor samples and is a cancer/testis antigen. hHspB9 interacts with TCTEL1 (T-complex testis expressed protein -1), a subunit of dynein. hHspB9 and TCTEL1 are co-expressed in similar cells within the testis and in tumor cells. Included in this group is Xenopus Hsp30, a developmentally-regulated heat-inducible molecular chaperone.

>cd06482 ACD_HspB10 Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB10, also known as sperm outer dense fiber protein (ODFP), and similar proteins

Probab=98.90  E-value=2.9e-09  Score=82.93  Aligned_cols=72  Identities=13%  Similarity=0.074  Sum_probs=53.3

Q ss_pred             CCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccc-----cccccCCeeeeecCCCCCccceeeEeeCC-e
Q 023450          129 PDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSS-----LDELELDMWRFRLPESTRPELASAVFEDG-E  200 (282)
Q Consensus       129 PeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~d-----edE~e~DkWRFRLPENA~pE~VsA~~eDG-V  200 (282)
                      -++|+..||+||  +++|+|+|   ++|   .|.+.+++....+     +.......++|+||++.+.|+|+|.|.|| +
T Consensus         7 ~~~~~v~adlPG~~kedI~V~v---~~~---~L~I~ger~~~~e~~~~~er~~g~F~R~f~LP~~Vd~d~i~A~~~~~~~   80 (87)
T cd06482           7 SSNVLASVDVCGFEPDQVKVKV---KDG---KVQVSAERENRYDCLGSKKYSYMNICKEFSLPPGVDEKDVTYSYGLGSV   80 (87)
T ss_pred             CCEEEEEEECCCCCHHHeEEEE---ECC---EEEEEEEEecccccCCccEEEEEEEEEEEECCCCcChHHcEEEEcCCCE
Confidence            478999999999  89999996   664   4666665532110     11122234489999999999999999999 9


Q ss_pred             EEEEee
Q 023450          201 LIVTVP  206 (282)
Q Consensus       201 LTVTVP  206 (282)
                      |++.-|
T Consensus        81 l~i~~~   86 (87)
T cd06482          81 VKIETP   86 (87)
T ss_pred             EEEeeC
Confidence            998755

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB10 occurs exclusively in the axoneme of sperm cells and may have a cytoskeletal role.

>cd00298 ACD_sHsps_p23-like This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins

Probab=98.89  E-value=9.1e-09  Score=69.81  Aligned_cols=78  Identities=22%  Similarity=0.276  Sum_probs=59.0

Q ss_pred             eeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccccccccCCeeeeecCCCCCccceeeEeeCCeEE
Q 023450          125 VEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWRFRLPESTRPELASAVFEDGELI  202 (282)
Q Consensus       125 VKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e~DkWRFRLPENA~pE~VsA~~eDGVLT  202 (282)
                      |.|+.+.|.+.+++||  +++++|++   .++  .+.+........+.+.......|+|.||...+++.++|.|.+|.|+
T Consensus         1 ~~q~~~~v~i~i~~~~~~~~~i~v~~---~~~--~l~v~~~~~~~~~~~~~~~~~~~~~~L~~~i~~~~~~~~~~~~~l~   75 (80)
T cd00298           1 WYQTDDEVVVTVDLPGVKKEDIKVEV---EDN--VLTISGKREEEEERERSYGEFERSFELPEDVDPEKSKASLENGVLE   75 (80)
T ss_pred             CEEcCCEEEEEEECCCCCHHHeEEEE---ECC--EEEEEEEEcCCCcceEeeeeEEEEEECCCCcCHHHCEEEEECCEEE
Confidence            7899999999999999  68999986   453  4444332111000122245558899999999999999999999999


Q ss_pred             EEeeC
Q 023450          203 VTVPK  207 (282)
Q Consensus       203 VTVPK  207 (282)
                      |++||
T Consensus        76 i~l~K   80 (80)
T cd00298          76 ITLPK   80 (80)
T ss_pred             EEEcC
Confidence            99998

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind

>cd06480 ACD_HspB8_like Alpha-crystallin domain (ACD) found in mammalian 21

Probab=98.53  E-value=2.1e-07  Score=73.43  Aligned_cols=72  Identities=21%  Similarity=0.241  Sum_probs=53.0

Q ss_pred             cCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCccccccccc----ccCCeeeeecCCCCCccceeeEee-CCe
Q 023450          128 SPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDE----LELDMWRFRLPESTRPELASAVFE-DGE  200 (282)
Q Consensus       128 TPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE----~e~DkWRFRLPENA~pE~VsA~~e-DGV  200 (282)
                      +.+.|....|+-|  .+|++|++   .++  + |++.|...++  +++    ......+|+||++.+++.|+|.+. ||+
T Consensus        13 ~~~~f~v~ldv~gF~pEDL~Vkv---~~~--~-L~V~Gkh~~~--~~e~g~~~r~F~R~~~LP~~Vd~~~v~s~l~~dGv   84 (91)
T cd06480          13 SSEPWKVCVNVHSFKPEELTVKT---KDG--F-VEVSGKHEEQ--QKEGGIVSKNFTKKIQLPPEVDPVTVFASLSPEGL   84 (91)
T ss_pred             CCCcEEEEEEeCCCCHHHcEEEE---ECC--E-EEEEEEECcc--cCCCCEEEEEEEEEEECCCCCCchhEEEEeCCCCe
Confidence            5678999999999  79999996   553  4 5445533322  111    112233899999999999999999 999


Q ss_pred             EEEEeeC
Q 023450          201 LIVTVPK  207 (282)
Q Consensus       201 LTVTVPK  207 (282)
                      |+|+.|.
T Consensus        85 L~IeaP~   91 (91)
T cd06480          85 LIIEAPQ   91 (91)
T ss_pred             EEEEcCC
Confidence            9999883

6 KDa small heat shock protein (sHsp) HspB8, also denoted as Hsp22 in humans, and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. A chaperone complex formed of HspB8 and Bag3 stimulates degradation of protein complexes by macroautophagy. HspB8 also forms complexes with Hsp27 (HspB1), MKBP (HspB2), HspB3, alphaB-crystallin (HspB5), Hsp20 (HspB6), and cvHsp (HspB7). These latter interactions may depend on phosphorylation of the respective partner sHsp. HspB8 may participate in the regulation of cell proliferation, cardiac hypertrophy, apoptosis, and carcinogenesis. Point mutations in HspB8 have been correlated with the development of several congenital neurological diseases, including Charcot Marie tooth disease and distal motor neuropathy type II.

>KOG3591 consensus Alpha crystallins [Posttranslational modification, protein turnover, chaperones]

Probab=98.12  E-value=9.6e-06  Score=70.35  Aligned_cols=86  Identities=19%  Similarity=0.226  Sum_probs=61.0

Q ss_pred             CCCccceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCccccccccc----ccCCeeeeecCCCCCccce
Q 023450          119 SDADVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDE----LELDMWRFRLPESTRPELA  192 (282)
Q Consensus       119 AdTdVDVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE----~e~DkWRFRLPENA~pE~V  192 (282)
                      +.....+..+.+-|....|+-.  .+|++|.+   .+   +.|++.|..-++  +++    ......||.||++.+++.|
T Consensus        61 ~~~~~~~~~~~~~F~V~lDV~~F~PeEl~Vk~---~~---~~l~V~gkHeer--~d~~G~v~R~F~R~y~LP~~vdp~~V  132 (173)
T KOG3591|consen   61 SSGASEIVNDKDKFEVNLDVHQFKPEELKVKT---DD---NTLEVEGKHEEK--EDEHGYVSRSFVRKYLLPEDVDPTSV  132 (173)
T ss_pred             cccccccccCCCcEEEEEEcccCcccceEEEe---CC---CEEEEEeeeccc--cCCCCeEEEEEEEEecCCCCCChhhe
Confidence            3445677788899999999988  79999997   34   334434422111  111    1122559999999999999


Q ss_pred             eeE-eeCCeEEEEeeCCCCCC
Q 023450          193 SAV-FEDGELIVTVPKGGGLE  212 (282)
Q Consensus       193 sA~-~eDGVLTVTVPK~e~pe  212 (282)
                      ++. ..||+|||++||.++.+
T Consensus       133 ~S~LS~dGvLtI~ap~~~~~~  153 (173)
T KOG3591|consen  133 TSTLSSDGVLTIEAPKPPPKQ  153 (173)
T ss_pred             EEeeCCCceEEEEccCCCCcC
Confidence            985 57999999999977544

>cd06469 p23_DYX1C1_like p23_like domain found in proteins similar to dyslexia susceptibility 1 (DYX1) candidate 1 (C1) protein, DYX1C1

Probab=98.00  E-value=5.1e-05  Score=54.73  Aligned_cols=68  Identities=16%  Similarity=0.134  Sum_probs=54.2

Q ss_pred             eeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccccccccCCeeeeecCCCCCccceeeEeeCCeEE
Q 023450          125 VEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWRFRLPESTRPELASAVFEDGELI  202 (282)
Q Consensus       125 VKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e~DkWRFRLPENA~pE~VsA~~eDGVLT  202 (282)
                      |.++++.....+++||  ++++++++   ++.  . +...+           +...-.++||...++|.++|.+.+|.|.
T Consensus         1 W~Qt~~~v~i~i~~p~v~~~~v~v~~---~~~--~-l~i~~-----------~~~~~~~~l~~~I~~e~~~~~~~~~~l~   63 (78)
T cd06469           1 WSQTDEDVKISVPLKGVKTSKVDIFC---SDL--Y-LKVNF-----------PPYLFELDLAAPIDDEKSSAKIGNGVLV   63 (78)
T ss_pred             CcccCCEEEEEEEeCCCccccceEEE---ecC--E-EEEcC-----------CCEEEEEeCcccccccccEEEEeCCEEE
Confidence            7899999999999999  67888774   553  2 33222           1123467999999999999999999999


Q ss_pred             EEeeCCC
Q 023450          203 VTVPKGG  209 (282)
Q Consensus       203 VTVPK~e  209 (282)
                      |++||.+
T Consensus        64 i~L~K~~   70 (78)
T cd06469          64 FTLVKKE   70 (78)
T ss_pred             EEEEeCC
Confidence            9999976

The human gene encoding this protein is a positional candidate gene for developmental dyslexia (DD), it is located on 15q21.3 by the DYX1 DD susceptibility locus (15q15-21). Independent association studies have reported conflicting results. However, association of short-term memory, which plays a role in DD, with a variant within the DYX1C1 gene has been reported. Most proteins belonging to this group contain a C-terminal tetratricopeptide repeat (TPR) protein binding region.

>cd06463 p23_like Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1

Probab=97.70  E-value=0.00043  Score=48.65  Aligned_cols=74  Identities=15%  Similarity=0.133  Sum_probs=57.1

Q ss_pred             eeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccccccccCCeeeeecCCCCCccceeeEeeCCeEE
Q 023450          125 VEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWRFRLPESTRPELASAVFEDGELI  202 (282)
Q Consensus       125 VKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e~DkWRFRLPENA~pE~VsA~~eDGVLT  202 (282)
                      |.++.+.....+++||  ++++.|.+   .+.  .+-+.....       +...-.+.+.|+...++|..++.+.+|.|.
T Consensus         1 W~Q~~~~v~i~v~~~~~~~~~~~v~~---~~~--~l~i~~~~~-------~~~~~~~~~~L~~~I~~~~s~~~~~~~~l~   68 (84)
T cd06463           1 WYQTLDEVTITIPLKDVTKKDVKVEF---TPK--SLTVSVKGG-------GGKEYLLEGELFGPIDPEESKWTVEDRKIE   68 (84)
T ss_pred             CcccccEEEEEEEcCCCCccceEEEE---ecC--EEEEEeeCC-------CCCceEEeeEccCccchhhcEEEEeCCEEE
Confidence            7889999999999999  58888885   553  333322211       112346789999999999999999999999


Q ss_pred             EEeeCCCC
Q 023450          203 VTVPKGGG  210 (282)
Q Consensus       203 VTVPK~e~  210 (282)
                      |+++|..+
T Consensus        69 i~L~K~~~   76 (84)
T cd06463          69 ITLKKKEP   76 (84)
T ss_pred             EEEEECCC
Confidence            99999763

Both are co-chaperones for the heat shock protein (Hsp) 90. p23 binds Hsp90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis. Both p23 and Sba1p can regulate telomerase activity. This group includes domains similar to the C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1). Sgt1 interacts with multiple protein complexes and has the features of a co-chaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. This group also includes the p23_like domains of

>PF05455 GvpH: GvpH; InterPro: IPR008633 This family consists of archaeal GvpH proteins which are thought to be involved in gas vesicle synthesis []

Probab=97.52  E-value=0.00063  Score=60.35  Aligned_cols=77  Identities=25%  Similarity=0.366  Sum_probs=57.0

Q ss_pred             ccceeecCC-eeeEEEecCC--CCc-eEEEEEEecCCceeEEEecCCcccccccccccCCeeeeecCCCCCccceeeEee
Q 023450          122 DVAVEESPD-YFKFVAETDG--MGE-VRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWRFRLPESTRPELASAVFE  197 (282)
Q Consensus       122 dVDVKETPe-AhvFvADlPG--keE-VKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e~DkWRFRLPENA~pE~VsA~~e  197 (282)
                      .|++.|.-+ -.+-+|||||  +++ ++|++   +.+...+++..+++.           .-|--||.. .++..+|.|.
T Consensus        93 ~vdtre~dDge~~VvAdLPGVs~dd~idV~l---~~d~~~L~i~~~~~~-----------~krv~L~~~-~~e~~~~t~n  157 (177)
T PF05455_consen   93 HVDTRERDDGELVVVADLPGVSDDDAIDVTL---DDDEGALTIRVGEKY-----------LKRVALPWP-DPEITSATFN  157 (177)
T ss_pred             eeeeEecCCCcEEEEEeCCCCCcccceeeEe---ecCCceEEEecCCce-----------EeeEecCCC-ccceeeEEEe
Confidence            478888877 5999999999  567 89985   765445555333221           226778844 6899999999


Q ss_pred             CCeEEEEeeCCCCCCC
Q 023450          198 DGELIVTVPKGGGLEG  213 (282)
Q Consensus       198 DGVLTVTVPK~e~pe~  213 (282)
                      ||+|.|-+-|.++.++
T Consensus       158 NgILEIri~~~~~~~~  173 (177)
T PF05455_consen  158 NGILEIRIRRTEESSG  173 (177)
T ss_pred             CceEEEEEeecCCCCC
Confidence            9999999999875554

>cd06466 p23_CS_SGT1_like p23_like domain similar to the C-terminal CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of Skp1)

Probab=96.83  E-value=0.011  Score=42.99  Aligned_cols=75  Identities=8%  Similarity=-0.026  Sum_probs=57.7

Q ss_pred             ceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccccccccCCeeeeecCCCCCccceeeEeeCCeE
Q 023450          124 AVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWRFRLPESTRPELASAVFEDGEL  201 (282)
Q Consensus       124 DVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e~DkWRFRLPENA~pE~VsA~~eDGVL  201 (282)
                      ||-++.+.....+.+||  +++++|+.   ++.  ++.+......       .+...+.+.|+....+|..++.+.+|.|
T Consensus         1 dW~Qt~~~v~i~v~~~~~~~~~v~v~~---~~~--~l~i~~~~~~-------~~~~~~~~~L~~~I~~~~s~~~~~~~~v   68 (84)
T cd06466           1 DWYQTDTSVTVTIYAKNVDKEDVKVEF---NEQ--SLSVSIILPG-------GSEYQLELDLFGPIDPEQSKVSVLPTKV   68 (84)
T ss_pred             CccccCCEEEEEEEECCCCHHHCEEEE---ecC--EEEEEEECCC-------CCeEEEecccccccCchhcEEEEeCeEE
Confidence            79999999999999999  68999985   553  4444211100       1123567889999999999999999999


Q ss_pred             EEEeeCCCC
Q 023450          202 IVTVPKGGG  210 (282)
Q Consensus       202 TVTVPK~e~  210 (282)
                      .|+..|..+
T Consensus        69 ei~L~K~~~   77 (84)
T cd06466          69 EITLKKAEP   77 (84)
T ss_pred             EEEEEcCCC
Confidence            999999763

Sgt1 interacts with multiple protein complexes and has the features of a cochaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. ScSgt1 is needed for the G1/S and G2/M cell-cycle transitions, and for assembly of the core kinetochore complex (CBF3) via activation of Ctf13, the F-box protein. Binding of Hsp82 (a yeast Hsp90 homologue) to ScSgt1, promotes the binding of Sgt1 to Skp1 and of Skp1 to Ctf13. Some proteins in this group have an SGT1-specific (SGS) domain at the extreme C-terminus. The ScSgt1-SGS domain binds adenylate cyclase. The hSgt1-SGS domain interacts with some S100 family proteins, and studies sug

>PF04969 CS: CS domain; InterPro: IPR017447 The function of the CS domain is unknown

Probab=95.34  E-value=0.25  Score=34.52  Aligned_cols=74  Identities=11%  Similarity=0.074  Sum_probs=54.6

Q ss_pred             ccceeecCCeeeEEEecCC----CCceEEEEEEecCCceeEEEecCCcccccccccccCCeeeeecCCCCCccceeeEee
Q 023450          122 DVAVEESPDYFKFVAETDG----MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWRFRLPESTRPELASAVFE  197 (282)
Q Consensus       122 dVDVKETPeAhvFvADlPG----keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e~DkWRFRLPENA~pE~VsA~~e  197 (282)
                      +.+|.++++.-...+.+++    +++|+|++   .+.  .+.+....      .+ .+.-.|...|....++|..+..+.
T Consensus         2 ~y~W~Qt~~~V~v~i~~~~~~~~~~dv~v~~---~~~--~l~v~~~~------~~-~~~~~~~~~L~~~I~~~~s~~~~~   69 (79)
T PF04969_consen    2 RYDWYQTDDEVTVTIPVKPVDISKEDVKVDF---TDT--SLSVSIKS------GD-GKEYLLEGELFGEIDPDESTWKVK   69 (79)
T ss_dssp             SEEEEEESSEEEEEEE-TTTTSSGGGEEEEE---ETT--EEEEEEEE------TT-SCEEEEEEEBSS-BECCCEEEEEE
T ss_pred             CeEEEECCCEEEEEEEEcCCCCChHHeEEEE---Eee--EEEEEEEc------cC-CceEEEEEEEeeeEcchhcEEEEE
Confidence            4689999999988999944    58999985   664  44443210      00 133467888999999999999999


Q ss_pred             CCeEEEEeeC
Q 023450          198 DGELIVTVPK  207 (282)
Q Consensus       198 DGVLTVTVPK  207 (282)
                      ++.|.|++.|
T Consensus        70 ~~~i~i~L~K   79 (79)
T PF04969_consen   70 DNKIEITLKK   79 (79)
T ss_dssp             TTEEEEEEEB
T ss_pred             CCEEEEEEEC
Confidence            9999999987

The CS domain is sometimes found C-terminal to the CHORD domain (IPR007051 from INTERPRO) in metazoan proteins, but occurs separately from the CHORD domain in plants. This association is thought to be indicative of an functional interaction between CS and CHORD domains [].; PDB: 1WGV_A 2KMW_A 2O30_B 1WH0_A 1EJF_A 2RH0_B 1RL1_A 2CR0_A 1WFI_A 2XCM_D ....

>PF08190 PIH1: pre-RNA processing PIH1/Nop17

Probab=92.63  E-value=0.62  Score=41.72  Aligned_cols=65  Identities=18%  Similarity=0.289  Sum_probs=50.0

Q ss_pred             ecCCeeeEEEecCC---CCceEEEEEEecCCceeEEEecCCcccccccccccCCeeeeecCCCCCccceeeEeeC--CeE
Q 023450          127 ESPDYFKFVAETDG---MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWRFRLPESTRPELASAVFED--GEL  201 (282)
Q Consensus       127 ETPeAhvFvADlPG---keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e~DkWRFRLPENA~pE~VsA~~eD--GVL  201 (282)
                      ..|+..+..+++||   ..++..+|   ++.  ++.+....          ........||-..+.+.++|.+.-  ++|
T Consensus       258 ~~p~~lvv~i~LP~~~s~~~i~LdV---~~~--~l~l~~~~----------~~y~L~l~LP~~V~~~~~~Akf~~~~~~L  322 (328)
T PF08190_consen  258 GSPEELVVEIELPGVESASDIDLDV---SED--RLSLSSPK----------PKYRLDLPLPYPVDEDNGKAKFDKKTKTL  322 (328)
T ss_pred             CCCceEEEEEECCCcCccceeEEEE---eCC--EEEEEeCC----------CceEEEccCCCcccCCCceEEEccCCCEE
Confidence            44899999999999   56777775   553  66553331          133567899999999999999876  999


Q ss_pred             EEEee
Q 023450          202 IVTVP  206 (282)
Q Consensus       202 TVTVP  206 (282)
                      +||+|
T Consensus       323 ~vtlp  327 (328)
T PF08190_consen  323 TVTLP  327 (328)
T ss_pred             EEEEE
Confidence            99998

>cd06467 p23_NUDC_like p23_like domain of NUD (nuclear distribution) C and similar proteins

Probab=82.16  E-value=16  Score=26.59  Aligned_cols=71  Identities=14%  Similarity=0.152  Sum_probs=52.2

Q ss_pred             ceeecCCeeeEEEecCC---CCceEEEEEEecCCceeEEEecCCcccccccccccCCeeeeecCCCCCccceeeEeeC-C
Q 023450          124 AVEESPDYFKFVAETDG---MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWRFRLPESTRPELASAVFED-G  199 (282)
Q Consensus       124 DVKETPeAhvFvADlPG---keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e~DkWRFRLPENA~pE~VsA~~eD-G  199 (282)
                      +|.++.+.-.....+|.   +++|+|++   .+.  .+-+...+.     +     ...--+|....++|..+-.+.+ .
T Consensus         2 ~W~Qt~~~V~i~i~~~~~~~~~dv~v~~---~~~--~l~v~~~~~-----~-----~~l~~~L~~~I~~~~s~w~~~~~~   66 (85)
T cd06467           2 SWTQTLDEVTVTIPLPEGTKSKDVKVEI---TPK--HLKVGVKGG-----E-----PLLDGELYAKVKVDESTWTLEDGK   66 (85)
T ss_pred             EEEeeCCEEEEEEECCCCCcceeEEEEE---EcC--EEEEEECCC-----C-----ceEcCcccCceeEcCCEEEEeCCC
Confidence            68999888777788875   68999985   553  555533211     0     1122368899999999999999 9


Q ss_pred             eEEEEeeCCC
Q 023450          200 ELIVTVPKGG  209 (282)
Q Consensus       200 VLTVTVPK~e  209 (282)
                      .|.|+.+|.+
T Consensus        67 ~v~i~L~K~~   76 (85)
T cd06467          67 LLEITLEKRN   76 (85)
T ss_pred             EEEEEEEECC
Confidence            9999999977

Aspergillus nidulas (An) NUDC is needed for nuclear movement. AnNUDC is localized at the hyphal cortex, and binds NUDF at spindle pole bodies (SPBs) and in the cytoplasm at different stages in the cell cycle. At the SPBs it is part of the dynein molecular motor/NUDF complex that regulates microtubule dynamics. Mammalian(m) NUDC associates both with the dynein complex and also with an anti-inflammatory enzyme, platelet activating factor acetylhydrolase I, PAF-AH(I) complex, through binding mNUDF, the regulatory beta subunit of PAF-AH(I). mNUDC is important for cell proliferation both in normal and tumor tissues. Its expression is elevated in various cell types undergoing mitosis or stimulated to proliferate, with high expression levels observed in leukemic cells and tumors. For a leukemic cell line, human NUDC was shown to activate the thrombopoietin (TPO) receptor (Mpl) by binding to its ext

>cd06465 p23_hB-ind1_like p23_like domain found in human (h) butyrate-induced transcript 1 (B-ind1) and similar proteins

Probab=82.15  E-value=13  Score=29.02  Aligned_cols=77  Identities=10%  Similarity=0.107  Sum_probs=57.1

Q ss_pred             ccceeecCCeeeEEEecCCCCceEEEEEEecCCceeEEEecCCcccccccccccCCeeeeecCCCCCccceeeEeeCCeE
Q 023450          122 DVAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWRFRLPESTRPELASAVFEDGEL  201 (282)
Q Consensus       122 dVDVKETPeAhvFvADlPGkeEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e~DkWRFRLPENA~pE~VsA~~eDGVL  201 (282)
                      .++|-.|++.-...+.+||.++++|++   .+.  +|.+..-+.. .     .+.-..-..|....++|..+..+.++.+
T Consensus         2 ~~~W~Qt~~~V~i~i~~~~~~~~~V~~---~~~--~l~v~~~~~~-~-----~~~y~~~~~L~~~I~pe~s~~~v~~~kv   70 (108)
T cd06465           2 PVLWAQRSDVVYLTIELPDAKDPKIKL---EPT--SLSFKAKGGG-G-----GKKYEFDLEFYKEIDPEESKYKVTGRQI   70 (108)
T ss_pred             ceeeeECCCEEEEEEEeCCCCCcEEEE---ECC--EEEEEEEcCC-C-----CeeEEEEeEhhhhccccccEEEecCCeE
Confidence            579999999999999999988888874   553  5544321110 0     1111234489999999999999999999


Q ss_pred             EEEeeCCC
Q 023450          202 IVTVPKGG  209 (282)
Q Consensus       202 TVTVPK~e  209 (282)
                      .|+..|..
T Consensus        71 eI~L~K~~   78 (108)
T cd06465          71 EFVLRKKE   78 (108)
T ss_pred             EEEEEECC
Confidence            99999976

hB-ind1 participates in signaling by the small GTPase Rac1. It binds to Rac1 and enhances different Rac1 effects including activation of nuclear factor (NF) kappaB and activation of c-Jun N-terminal kinase (JNK). hB-ind1 also plays a part in the RNA replication and particle production of Hepatitis C virus (HCV) through its interaction with heat shock protein Hsp90, HCV nonstructural protein 5A (NS5A), and the immunophilin FKBP8. hB-ind1 is upregulated in the outer layer of Chinese hamster V79 cells grown as multicell spheroids, versus in the same cells grown as monolayers. This group includes the Saccharomyces cerevisiae Sba1, a co-chaperone of the Hsp90. Sba1 has been shown to be is required for telomere length maintenance, and may modulate telomerase DNA-binding activity.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	282
3gla_A	100	Low molecular weight heat shock protein; HSPA, SHP	4e-05
1gme_A	151	Heat shock protein 16.9B; small heat shock protein	1e-04
4eld_A	161	MJ16.5-P1, small heat shock protein HSP16.5; chape	6e-04

>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A Length = 100

 Score = 40.9 bits (97), Expect = 4e-05
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 180 RFRLPESTRPELASAVFEDGELIVTVPK 207
           RF LP+S   +  +A   +G L + +PK
Sbjct: 69  RFALPDSADADGITAAGRNGVLEIRIPK 96

>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A Length = 151

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 15/28 (53%), Positives = 17/28 (60%)

Query: 180 RFRLPESTRPELASAVFEDGELIVTVPK 207
           RFRL E  + E   A  E+G L VTVPK
Sbjct: 109 RFRLLEDAKVEEVKAGLENGVLTVTVPK 136

>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A Length = 161

 Score = 38.6 bits (90), Expect = 6e-04
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 180 RFRLPESTRPELASAVFEDGELIVTVPK 207
             +LP + + E ASA FE+G L V +PK
Sbjct: 122 TIKLPATVKEENASAKFENGVLSVILPK 149

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	282
3gla_A	100	Low molecular weight heat shock protein; HSPA, SHP	99.63
4fei_A	102	Heat shock protein-related protein; stress respons	99.62
2wj5_A	101	Heat shock protein beta-6; chaperone, disulfide bo	99.61
1gme_A	151	Heat shock protein 16.9B; small heat shock protein	99.6
3l1e_A	106	Alpha-crystallin A chain; lens transparency, polyd	99.56
4eld_A	161	MJ16.5-P1, small heat shock protein HSP16.5; chape	99.52
3q9p_A	85	Heat shock protein beta-1; alpha-crystallin domain	99.52
3aab_A	123	Putative uncharacterized protein ST1653; alpha-cry	99.48
2y1y_A	90	Alpha-crystallin B chain,; small heat shock protei	99.47
2klr_A	175	Alpha-crystallin B chain; protein, dimer, oligomer	99.42
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	99.33
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	99.17
1rl1_A	114	Suppressor of G2 allele of SKP1 homolog; beta sand	97.64
2xcm_C	92	SGT1-like protein, cytosolic heat shock protein 90	97.43
1wh0_A	134	Ubiquitin carboxyl-terminal hydrolase 19; USP, CS	86.47
3igf_A	374	ALL4481 protein; two-domained protein consisting o	85.52
3eud_A	115	Protein SHQ1; CS domain HSP20-like domain SHQ1 H/A	83.16
2k8q_A	134	Protein SHQ1; beta-sandwich, CS domain, nucleus, s	81.63

>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A

Probab=99.63  E-value=6.1e-16  Score=116.24  Aligned_cols=82  Identities=24%  Similarity=0.297  Sum_probs=63.2

Q ss_pred             ccceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccc---------cccccCCeeeeecCCCCCcc
Q 023450          122 DVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSS---------LDELELDMWRFRLPESTRPE  190 (282)
Q Consensus       122 dVDVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~d---------edE~e~DkWRFRLPENA~pE  190 (282)
                      ++||.|+.++|++.+|+||  +++|+|++   +++   .|.+.+++.....         |........+|.||++++++
T Consensus         6 ~~di~e~~~~~~v~~~lPG~~~edi~v~~---~~~---~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~   79 (100)
T 3gla_A            6 RVDIKEEVNHFVLYADLPGIDPSQIEVQM---DKG---ILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADAD   79 (100)
T ss_dssp             CEEEEECSSEEEEEEECTTSCGGGCEEEE---ETT---EEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTT
T ss_pred             cEEEEECCCEEEEEEECCCCCHHHEEEEE---ECC---EEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChH
Confidence            5899999999999999999  79999996   554   4555554432100         11112234489999999999


Q ss_pred             ceeeEeeCCeEEEEeeCCC
Q 023450          191 LASAVFEDGELIVTVPKGG  209 (282)
Q Consensus       191 ~VsA~~eDGVLTVTVPK~e  209 (282)
                      .|+|.|+||+|+||+||.+
T Consensus        80 ~i~A~~~~GvL~I~~pK~~   98 (100)
T 3gla_A           80 GITAAGRNGVLEIRIPKRP   98 (100)
T ss_dssp             SCEEEEETTEEEEEEEBC-
T ss_pred             HeEEEEeCCEEEEEEecCC
Confidence            9999999999999999976

>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}

Probab=99.62  E-value=1.1e-15  Score=116.67  Aligned_cols=85  Identities=15%  Similarity=0.137  Sum_probs=66.7

Q ss_pred             CccceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCccccc----ccccccCCeeeeecCCCCCccceee
Q 023450          121 ADVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELS----SLDELELDMWRFRLPESTRPELASA  194 (282)
Q Consensus       121 TdVDVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~----dedE~e~DkWRFRLPENA~pE~VsA  194 (282)
                      -++||.|+.++|++.+|+||  +++|+|++   +++   .|.+.|++....    .|........+|+||++++++.|+|
T Consensus         7 P~~di~e~~~~~~v~~~lPG~~~edi~v~~---~~~---~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A   80 (102)
T 4fei_A            7 PAADWRDAGTHLDLLLDVPGVDAGTLALAE---DGG---QLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVA   80 (102)
T ss_dssp             CCEEEEEETTEEEEEEECTTCCGGGCEEEE---ETT---EEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEE
T ss_pred             CcEEEEEcCCEEEEEEECCCCchHhEEEEE---ECC---EEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEE
Confidence            36899999999999999999  79999995   554   455555442110    1223344566899999999999999


Q ss_pred             EeeCCeEEEEeeCCCCC
Q 023450          195 VFEDGELIVTVPKGGGL  211 (282)
Q Consensus       195 ~~eDGVLTVTVPK~e~p  211 (282)
                      .|+||+|+||+||.++.
T Consensus        81 ~~~~GvL~I~lpK~~~~   97 (102)
T 4fei_A           81 SLAGGVLTVRFEKLRPT   97 (102)
T ss_dssp             EEETTEEEEEEEBSSCC
T ss_pred             EEECCEEEEEEEccCcc
Confidence            99999999999998743

>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}

Probab=99.61  E-value=1.2e-15  Score=116.92  Aligned_cols=88  Identities=20%  Similarity=0.277  Sum_probs=67.0

Q ss_pred             CccceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccccccccC----CeeeeecCCCCCccceee
Q 023450          121 ADVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELEL----DMWRFRLPESTRPELASA  194 (282)
Q Consensus       121 TdVDVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e~----DkWRFRLPENA~pE~VsA  194 (282)
                      .-|||.|+.++|++.+|+||  +++|+|++   +++   .|.+.+++...  .++.+.    ...+|+||++++++.|+|
T Consensus         2 ~~vdi~e~~~~~~v~~dlPG~~~edI~V~v---~~~---~L~I~g~~~~~--~~~~~~~~~eF~R~~~LP~~vd~~~i~A   73 (101)
T 2wj5_A            2 AMAQVPTDPGYFSVLLDVKHFSPEEISVKV---VGD---HVEVHARHEER--PDEHGFIAREFHRRYRLPPGVDPAAVTS   73 (101)
T ss_dssp             CCCCCCCCSSCEEEEEECTTSCGGGEEEEE---ETT---EEEEEEEEEEC--SSTTCCEEEEEEEEEECCTTBCTTCCEE
T ss_pred             CcEEEEEeCCEEEEEEECCCCcHHHeEEEE---ECC---EEEEEEEEecc--cCCCCEEEEEEEEEEECCCCcChhHCEE
Confidence            35899999999999999999  79999996   564   45555554321  111110    334899999999999999


Q ss_pred             Ee-eCCeEEEEeeCCCCCCCCcc
Q 023450          195 VF-EDGELIVTVPKGGGLEGLEE  216 (282)
Q Consensus       195 ~~-eDGVLTVTVPK~e~pe~~e~  216 (282)
                      .| +||+|+||+||.++...++.
T Consensus        74 ~~s~nGvL~I~lPK~~~~~~~~~   96 (101)
T 2wj5_A           74 ALSPEGVLSIQATPASAQASLPS   96 (101)
T ss_dssp             EECTTSEEEEEECBCCCCCSSCC
T ss_pred             EECCCCEEEEEEECCCcCCCCCC
Confidence            99 89999999999875554443

>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A

Probab=99.60  E-value=4.7e-15  Score=120.96  Aligned_cols=86  Identities=28%  Similarity=0.364  Sum_probs=66.7

Q ss_pred             CCccceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccc---------cccccCCeeeeecCCCCC
Q 023450          120 DADVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSS---------LDELELDMWRFRLPESTR  188 (282)
Q Consensus       120 dTdVDVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~d---------edE~e~DkWRFRLPENA~  188 (282)
                      ...+||.|+.++|+..+|+||  +++|+|++   ++|  +.|.+.+++....+         |........+|+||++++
T Consensus        43 ~p~~di~e~~d~~~v~~dlPGv~kedI~V~v---~~~--~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd  117 (151)
T 1gme_A           43 NARMDWKETPEAHVFKADLPGVKKEEVKVEV---EDG--NVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAK  117 (151)
T ss_dssp             GGCEEEEECSSEEEEEEECTTCCGGGEEEEE---ETT--TEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCC
T ss_pred             CCceEEEEcCCEEEEEEECCCCChHHEEEEE---ecC--CEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCcc
Confidence            357999999999999999999  79999995   454  56766666542210         111123344899999999


Q ss_pred             ccceeeEeeCCeEEEEeeCCCC
Q 023450          189 PELASAVFEDGELIVTVPKGGG  210 (282)
Q Consensus       189 pE~VsA~~eDGVLTVTVPK~e~  210 (282)
                      ++.|+|.|+||+|+||+||.++
T Consensus       118 ~~~i~A~~~nGvL~I~lPK~~~  139 (151)
T 1gme_A          118 VEEVKAGLENGVLTVTVPKAEV  139 (151)
T ss_dssp             GGGCEEEEETTEEEEEEECCCC
T ss_pred             ccceEEEEECCEEEEEEEccCc
Confidence            9999999999999999999864

>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A

Probab=99.56  E-value=1.1e-14  Score=112.75  Aligned_cols=82  Identities=20%  Similarity=0.168  Sum_probs=63.8

Q ss_pred             ccceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCccccccccccc----CCeeeeecCCCCCccceeeE
Q 023450          122 DVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELE----LDMWRFRLPESTRPELASAV  195 (282)
Q Consensus       122 dVDVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e----~DkWRFRLPENA~pE~VsA~  195 (282)
                      -+||.|+.++|+..+|+||  +++|+|++   +++   .|.+.+++.+.  .++.+    ....+|+||++++++.|+|.
T Consensus         4 ~~~i~e~~~~~~v~~dlPG~~~edi~V~v---~~~---~L~I~g~~~~~--~~~~~~~~~eF~R~~~LP~~vd~~~i~A~   75 (106)
T 3l1e_A            4 ISEVRSDRDKFVIFLDVKHFSPEDLTVKV---QED---FVEIHGKHNER--QDDHGYISREFHRRYRLPSNVDQSALSCS   75 (106)
T ss_dssp             SEEEEECSSEEEEEEECTTSCGGGEEEEE---ETT---EEEEEEEEEEE--ETTTEEEEEEEEEEEECCTTBCTTSCEEE
T ss_pred             ceEEEEcCCEEEEEEECCCCChHHEEEEE---ECC---EEEEEEEEccc--cCCCCEEEEEEEEEEECCCCcChhHcEEE
Confidence            3789999999999999999  89999996   554   46555543221  11100    12448999999999999999


Q ss_pred             e-eCCeEEEEeeCCCCC
Q 023450          196 F-EDGELIVTVPKGGGL  211 (282)
Q Consensus       196 ~-eDGVLTVTVPK~e~p  211 (282)
                      | .||+|+||+||.++.
T Consensus        76 ~s~~GvL~I~~PK~~~~   92 (106)
T 3l1e_A           76 LSADGMLTFSGPKIPSG   92 (106)
T ss_dssp             ECTTSEEEEEEEBCCCC
T ss_pred             ECCCCEEEEEEEccCcc
Confidence            9 899999999998754

>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A

Probab=99.52  E-value=2.1e-14  Score=117.24  Aligned_cols=84  Identities=24%  Similarity=0.223  Sum_probs=64.8

Q ss_pred             CccceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCccccc-c--------cc-cccCCeeeeecCCCCC
Q 023450          121 ADVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELS-S--------LD-ELELDMWRFRLPESTR  188 (282)
Q Consensus       121 TdVDVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~-d--------ed-E~e~DkWRFRLPENA~  188 (282)
                      .+|||.|+.++|+..+|+||  ++||+|++   +++   +|.+.|++.... .        |. .......+|+||++++
T Consensus        57 ~pvdi~e~~~~~~v~~dlPG~~~edi~V~~---~~~---~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd  130 (161)
T 4eld_A           57 MPISIIEGDQHIKVIAWLPGVNKEDIILNA---VGD---TLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVK  130 (161)
T ss_dssp             CCEEEEECSSEEEEEEECTTCCGGGEEEEE---ETT---EEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBC
T ss_pred             cceeEEEeCCEEEEEEECCCCChHhEEEEE---ECC---EEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcc
Confidence            35899999999999999999  89999996   554   465555543210 0        11 1122345799999999


Q ss_pred             ccceeeEeeCCeEEEEeeCCCC
Q 023450          189 PELASAVFEDGELIVTVPKGGG  210 (282)
Q Consensus       189 pE~VsA~~eDGVLTVTVPK~e~  210 (282)
                      ++.|+|.|+||+|+||+||.+.
T Consensus       131 ~~~i~A~~~nGvL~I~lpK~~~  152 (161)
T 4eld_A          131 EENASAKFENGVLSVILPKAES  152 (161)
T ss_dssp             GGGCEEEEETTEEEEEEEBCGG
T ss_pred             cccEEEEEECCEEEEEEEcCCC
Confidence            9999999999999999999764

>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A

Probab=99.52  E-value=3e-14  Score=106.30  Aligned_cols=78  Identities=15%  Similarity=0.233  Sum_probs=58.1

Q ss_pred             eeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCccccccccc--ccCCeeeeecCCCCCccceeeEee-CC
Q 023450          125 VEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDE--LELDMWRFRLPESTRPELASAVFE-DG  199 (282)
Q Consensus       125 VKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE--~e~DkWRFRLPENA~pE~VsA~~e-DG  199 (282)
                      ..|+.++|+..+|+||  +++|+|++   ++|   +|.+.+++....++..  .....++|+||+++++|.|+|.|. ||
T Consensus         2 ~~E~~~~~~v~~dlPG~~~edi~V~v---~~~---~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~G   75 (85)
T 3q9p_A            2 GSHTADRWRVSLDVNHFAPDELTVKT---KDG---VVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEG   75 (85)
T ss_dssp             -CCCCCEEEEEEECTTTCCSEEEEEE---ETT---EEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTS
T ss_pred             ccCcCCEEEEEEECCCCChHHEEEEE---ECC---EEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCC
Confidence            4699999999999999  89999996   664   4665665432211110  112344899999999999999998 99


Q ss_pred             eEEEEeeCC
Q 023450          200 ELIVTVPKG  208 (282)
Q Consensus       200 VLTVTVPK~  208 (282)
                      +|+||+||.
T Consensus        76 vL~I~lPK~   84 (85)
T 3q9p_A           76 TLTVEAPMP   84 (85)
T ss_dssp             EEEEEEECC
T ss_pred             EEEEEEEcC
Confidence            999999994

>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A

Probab=99.48  E-value=4.7e-14  Score=110.47  Aligned_cols=83  Identities=20%  Similarity=0.265  Sum_probs=64.3

Q ss_pred             CccceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCccccc------ccccccCCeeeeecCCCCCccce
Q 023450          121 ADVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELS------SLDELELDMWRFRLPESTRPELA  192 (282)
Q Consensus       121 TdVDVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~------dedE~e~DkWRFRLPENA~pE~V  192 (282)
                      -.+||.|+.++|+..+|+||  +++|+|++   +++  +.|.+.|++....      .|... ....+|+||++++++.|
T Consensus        25 P~~di~e~~~~~~v~~~lPG~~~edi~V~v---~~~--~~L~I~g~~~~~~~~~~~~~Er~~-~f~R~~~LP~~vd~~~i   98 (123)
T 3aab_A           25 PPVDMYEEGGYLVVVADLAGFNKEKIKARV---SGQ--NELIIEAEREITEPGVKYLTQRPK-YVRKVIRLPYNVAKDAE   98 (123)
T ss_dssp             SCEEEEEETTEEEEEEECCSCCGGGCEEEE---ETT--TEEEEEEECCCCCCSCEEEECSCS-EEEEEEECSSEECTTCC
T ss_pred             CcEEEEEcCCEEEEEEECCCCCHHHEEEEE---eCC--CEEEEEEEEeccCCCeEEEEEEeE-EEEEEEECCCCcCcchh
Confidence            36999999999999999999  79999996   562  3455555443210      01111 34557999999999999


Q ss_pred             -eeEeeCCeEEEEeeCCC
Q 023450          193 -SAVFEDGELIVTVPKGG  209 (282)
Q Consensus       193 -sA~~eDGVLTVTVPK~e  209 (282)
                       +|.|+||+|+||+||.+
T Consensus        99 ~~A~~~~GvL~I~lPK~~  116 (123)
T 3aab_A           99 ISGKYENGVLTIRIPIAG  116 (123)
T ss_dssp             CEEEEETTEEEEEEEGGG
T ss_pred             CeeEEcCCEEEEEEEcCC
Confidence             99999999999999976

>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A

Probab=99.47  E-value=7.4e-14  Score=104.66  Aligned_cols=78  Identities=18%  Similarity=0.203  Sum_probs=54.6

Q ss_pred             eecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCccccccccccc----CCeeeeecCCCCCccceeeEe-eC
Q 023450          126 EESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELE----LDMWRFRLPESTRPELASAVF-ED  198 (282)
Q Consensus       126 KETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e----~DkWRFRLPENA~pE~VsA~~-eD  198 (282)
                      +|+.++|+..+|+||  +++|+|++   +++   .|.+.+++...  .++..    ....+|+||++++++.|+|.| .|
T Consensus         2 k~~~~~~~v~~dlPG~~~edi~V~v---~~~---~L~I~g~~~~~--~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~   73 (90)
T 2y1y_A            2 AMEKDRFSVNLDVKHFSPEELKVKV---LGD---VIEVHGKHEER--QDEHGFISREFHRKYRIPADVDPLTITSSMSSD   73 (90)
T ss_dssp             ----CCEEEEEECTTSCGGGEEEEE---ETT---EEEEEEEEEEE--ECSSSEEEEEEEEEEECCTTBCGGGCEEEECTT
T ss_pred             CcCCCEEEEEEECCCCcHHHeEEEE---ECC---EEEEEEEEecc--cCCCCEEEEEEEEEEECCCCcChhHcEEEECCC
Confidence            689999999999999  79999996   564   45555544321  11100    133489999999999999999 99


Q ss_pred             CeEEEEeeCCCCC
Q 023450          199 GELIVTVPKGGGL  211 (282)
Q Consensus       199 GVLTVTVPK~e~p  211 (282)
                      |+|+||+||.++.
T Consensus        74 GvL~I~~pK~~~~   86 (90)
T 2y1y_A           74 GVLTVNGPRKQVS   86 (90)
T ss_dssp             SEEEEEECBC---
T ss_pred             CEEEEEEEcCCCC
Confidence            9999999997643

>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A

Probab=99.42  E-value=1.6e-13  Score=115.77  Aligned_cols=83  Identities=17%  Similarity=0.187  Sum_probs=59.1

Q ss_pred             CCccceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCccccccccccc----CCeeeeecCCCCCcccee
Q 023450          120 DADVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELE----LDMWRFRLPESTRPELAS  193 (282)
Q Consensus       120 dTdVDVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e----~DkWRFRLPENA~pE~Vs  193 (282)
                      +..+||.|+.++|+..+|+||  ++||+|++   ++|   .|.+.|++.+.  +++.+    ....+|+||+++++|.|+
T Consensus        63 ~~~~dv~e~~d~~~v~~dlPG~~~edI~V~v---~~~---~L~I~g~~~~~--~~~~~~~~reF~R~~~LP~~Vd~~~i~  134 (175)
T 2klr_A           63 TGLSEMRLEKDRFSVNLDVKHFSPEELKVKV---LGD---VIEVHGKHEER--QDEHGFISREFHRKYRIPADVDPLTIT  134 (175)
T ss_dssp             ------CCCCSEEEEEECCSSCCGGGEEEEE---ETT---EEEEEEEEEEE--EETTEEEEEEEEEEEECTTTCCTTTCE
T ss_pred             CCceEEEEcCCeEEEEEECCCCChHHEEEEE---ECC---EEEEEEEEccc--ccCCceEEEEEEEEEECCCCcChhHeE
Confidence            445899999999999999999  89999996   564   45555544321  11100    034589999999999999


Q ss_pred             eEe-eCCeEEEEeeCCCC
Q 023450          194 AVF-EDGELIVTVPKGGG  210 (282)
Q Consensus       194 A~~-eDGVLTVTVPK~e~  210 (282)
                      |.| +||+|+||+||.+.
T Consensus       135 A~~s~dGvL~I~lPK~~~  152 (175)
T 2klr_A          135 SSLSSDGVLTVNGPRKQV  152 (175)
T ss_dssp             EEECTTSCEEEEEECC--
T ss_pred             EEEcCCCEEEEEEECCCC
Confidence            999 89999999999763

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}

Probab=99.33  E-value=5.4e-12  Score=115.17  Aligned_cols=85  Identities=14%  Similarity=0.039  Sum_probs=66.6

Q ss_pred             CccceeecCC----eeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccc-cccccCCeeeeecCCCCCcccee
Q 023450          121 ADVAVEESPD----YFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSS-LDELELDMWRFRLPESTRPELAS  193 (282)
Q Consensus       121 TdVDVKETPe----AhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~d-edE~e~DkWRFRLPENA~pE~Vs  193 (282)
                      -.||+.|+.+    +|+..+|+||  +++|+|++   +++   +|.+.|++...++ .........+|+||+++++|.|+
T Consensus        99 p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v---~~~---~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~  172 (314)
T 2bol_A           99 FLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKA---DKN---KLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQ  172 (314)
T ss_dssp             GGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEE---ETT---EEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCE
T ss_pred             CccceEEcCCCCceEEEEEEECCCCchHHeEEEE---ECC---EEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccE
Confidence            3799999999    9999999999  89999996   664   4665665542210 11123345589999999999999


Q ss_pred             eEee-CCeEEEEeeCCCCC
Q 023450          194 AVFE-DGELIVTVPKGGGL  211 (282)
Q Consensus       194 A~~e-DGVLTVTVPK~e~p  211 (282)
                      |.|. ||||+||+||.++.
T Consensus       173 A~~~~nGVL~I~lPK~~~~  191 (314)
T 2bol_A          173 ATITTDDVLVIEAPVNEPN  191 (314)
T ss_dssp             EEECSSSEEEEEEEBSSCC
T ss_pred             EEEeCCCEEEEEEeccCcc
Confidence            9999 99999999998754

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}

Probab=99.17  E-value=1.4e-11  Score=112.42  Aligned_cols=75  Identities=15%  Similarity=0.054  Sum_probs=56.9

Q ss_pred             cCCeeeEEEec-CC--CCceEEEEEEecCCceeEEEecCCcccccc-----cccccCCeeeeecCCCCCccceeeEeeCC
Q 023450          128 SPDYFKFVAET-DG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSS-----LDELELDMWRFRLPESTRPELASAVFEDG  199 (282)
Q Consensus       128 TPeAhvFvADl-PG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~d-----edE~e~DkWRFRLPENA~pE~VsA~~eDG  199 (282)
                      +.++|++.||+ ||  ++||+|+|   ++   ++|.++|++....+     |........+|.||+++++|.|+|.|+||
T Consensus       231 ~~~~~~v~~~ldPG~~~edi~V~v---~~---~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~dG  304 (314)
T 2bol_A          231 GSKKIHLELKVDPHFAPKDVKVWA---KG---NKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEIVDG  304 (314)
T ss_dssp             SCEEEEEEEECCTTCCGGGEEEEE---SS---SEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEEETT
T ss_pred             CCcEEEEEEEcCCCCChHHeEEEE---EC---CEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEEeCC
Confidence            56789999999 99  89999996   66   45776776542210     11123345589999999999999999999


Q ss_pred             eEEEEeeCC
Q 023450          200 ELIVTVPKG  208 (282)
Q Consensus       200 VLTVTVPK~  208 (282)
                      ||+||+||.
T Consensus       305 vL~i~~Pk~  313 (314)
T 2bol_A          305 LMVVEAPLF  313 (314)
T ss_dssp             EEEEEEEEE
T ss_pred             EEEEEEecC
Confidence            999999995

>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3

Probab=97.64  E-value=0.00043  Score=52.68  Aligned_cols=90  Identities=10%  Similarity=0.023  Sum_probs=64.6

Q ss_pred             CCCCCccceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccccccccCCeeeeecCCCCCccceee
Q 023450          117 FRSDADVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWRFRLPESTRPELASA  194 (282)
Q Consensus       117 F~AdTdVDVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e~DkWRFRLPENA~pE~VsA  194 (282)
                      +...-++||.+|.+.....+++||  +++++|+   +.+...+|-+...+         .+...+.+.|+...++|..++
T Consensus         6 ~~~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~---~~~~~l~v~~~~~~---------~~~y~~~~~L~~~I~~e~s~~   73 (114)
T 1rl1_A            6 HQSKIKYDWYQTESQVVITLMIKNVQKNDVNVE---FSEKELSALVKLPS---------GEDYNLKLELLHPIIPEQSTF   73 (114)
T ss_dssp             --CCCCEEEEECSSEEEEEECCCSCCGGGEEEE---CSSSCEEEEEECTT---------SSEEEEEECBSSCCCGGGEEE
T ss_pred             CCCCCCccEEeCCCEEEEEEEeCCCCHHHCEEE---EEcCEEEEEEEeCC---------CcEEEEEeeCCCcCCccccEE
Confidence            445567899999999988999999  5789888   46652222221110         112356889999999999999


Q ss_pred             EeeCCeEEEEeeCCCCCCCCcccCCC
Q 023450          195 VFEDGELIVTVPKGGGLEGLEERDGG  220 (282)
Q Consensus       195 ~~eDGVLTVTVPK~e~pe~~e~r~g~  220 (282)
                      .+.+|.|.|+++|.++  +.=+|...
T Consensus        74 ~~~~~~l~i~L~K~~~--~~W~~L~~   97 (114)
T 1rl1_A           74 KVLSTKIEIKLKKPEA--VRWEKLEG   97 (114)
T ss_dssp             EECSSSEEEEEECSSC--CCCSSSBT
T ss_pred             EEECCEEEEEEEcCCC--CcCccccc
Confidence            9999999999999863  24455443

>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*

Probab=97.43  E-value=0.0011  Score=48.20  Aligned_cols=77  Identities=9%  Similarity=-0.009  Sum_probs=59.5

Q ss_pred             CccceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccccccccCCeeeeecCCCCCccceeeEeeC
Q 023450          121 ADVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWRFRLPESTRPELASAVFED  198 (282)
Q Consensus       121 TdVDVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e~DkWRFRLPENA~pE~VsA~~eD  198 (282)
                      -++||-+|.+.-...+.+||  +++++|++   .+.  .+-+...+.  .     .+.....+.|+...++|..++.+.+
T Consensus         3 ~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~---~~~--~l~v~~~~~--~-----~~~y~~~~~L~~~I~~~~s~~~~~~   70 (92)
T 2xcm_C            3 YRHEYYQKPEEVVVTVFAKGIPKQNVNIDF---GEQ--ILSVVIEVP--G-----EDAYYLQPRLFGKIIPDKCKYEVLS   70 (92)
T ss_dssp             SEEEEEEETTEEEEEEECCSCCGGGEEEEE---CSS--BEEEEECCT--T-----SCCEEECCBBSSCBCGGGCEEEECS
T ss_pred             ccccEEeCCCEEEEEEEECCCChHHeEEEE---ECC--EEEEEEEcC--C-----CcEEEEeeEcCCccCchhEEEEEEC
Confidence            46899999998888899999  68899884   665  333322111  0     1223557799999999999999999


Q ss_pred             CeEEEEeeCCC
Q 023450          199 GELIVTVPKGG  209 (282)
Q Consensus       199 GVLTVTVPK~e  209 (282)
                      |.|.|+.+|.+
T Consensus        71 ~~l~i~L~K~~   81 (92)
T 2xcm_C           71 TKIEICLAKAD   81 (92)
T ss_dssp             SCEEEEEEBSS
T ss_pred             CEEEEEEEcCC
Confidence            99999999976

>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3

Probab=86.47  E-value=7.1  Score=31.45  Aligned_cols=85  Identities=12%  Similarity=0.110  Sum_probs=57.8

Q ss_pred             Cccceeec-CCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcc----cccccccccCCeeeeecCCCCCcccee
Q 023450          121 ADVAVEES-PDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCV----ELSSLDELELDMWRFRLPESTRPELAS  193 (282)
Q Consensus       121 TdVDVKET-PeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr----~~~dedE~e~DkWRFRLPENA~pE~Vs  193 (282)
                      .+.||-.| .+.-...+.+++  +++++|++   .+.-.+|-+...+..    ...+. +.....|...|-...++|..+
T Consensus        20 ~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f---~~~~l~v~~~~~~~~~l~~~~a~g-~~~~y~~~~~L~~~I~pe~S~   95 (134)
T 1wh0_A           20 VKNDSYEKGPDSVVVHVYVKEICRDTSRVLF---REQDFTLIFQTRDGNFLRLHPGCG-PHTTFRWQVKLRNLIEPEQCT   95 (134)
T ss_dssp             CCEEEEEETTTEEEEEEECCSBCTTSCEEEE---CSSEEEEEECBCCHHHHHHSTTCC-TTSCEEEEEEBSSCEEEEEEE
T ss_pred             CCeEEEcCCCCEEEEEEEeCCCCcccCEEEE---ECCEEEEEEEcCCCcccccccccC-cceeEEEeccccccCCchhCE
Confidence            47899999 887666788999  68999984   664222222221100    00000 012346667899999999999


Q ss_pred             eEeeCCeEEEEeeCCC
Q 023450          194 AVFEDGELIVTVPKGG  209 (282)
Q Consensus       194 A~~eDGVLTVTVPK~e  209 (282)
                      ..+.+..+.|++-|.+
T Consensus        96 ~~v~~~kIeI~L~K~e  111 (134)
T 1wh0_A           96 FCFTASRIDICLRKRQ  111 (134)
T ss_dssp             EEECSSEEEEEEEESS
T ss_pred             EEEeCCEEEEEEEECC
Confidence            9999999999999975

>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}

Probab=85.52  E-value=1.5  Score=40.40  Aligned_cols=68  Identities=13%  Similarity=0.223  Sum_probs=48.0

Q ss_pred             CCccceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccccccccCCeeeeecCCC-CCccceeeEe
Q 023450          120 DADVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWRFRLPES-TRPELASAVF  196 (282)
Q Consensus       120 dTdVDVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e~DkWRFRLPEN-A~pE~VsA~~  196 (282)
                      ..++.+.+.  .|+...-+||  +++|+..-  ..|   -++|..|            +.+.+++||.. ..-+-..|.+
T Consensus       297 ~~~~~i~~~--~~~~~l~lP~~~~~~~~l~~--~gd---eL~v~~g------------~~rR~i~LP~~L~~~~v~~A~~  357 (374)
T 3igf_A          297 PKPITIDTH--NRQVRLFLPGFDKKQVKLTQ--YGP---EVTVEAG------------DQRRNIFLPPALSGRPITGAKF  357 (374)
T ss_dssp             CCSEEEETT--TTEEEEECTTCCGGGCEEEE--ETT---EEEEEET------------TEEEEEECCTTTTTCCEEEEEE
T ss_pred             CCCEEEEec--cEEEEEECCCCCHHHeEEEE--ECC---eEEEEEC------------CEeecccCCHHHcCCCccccEE
Confidence            344444333  7999999999  78888652  333   3555444            33668999998 5566788999


Q ss_pred             eCCeEEEEee
Q 023450          197 EDGELIVTVP  206 (282)
Q Consensus       197 eDGVLTVTVP  206 (282)
                      +||.|+|+.=
T Consensus       358 ~~~~L~i~~~  367 (374)
T 3igf_A          358 QNNYLIISFL  367 (374)
T ss_dssp             ETTEEEEEEC
T ss_pred             ECCEEEEEEe
Confidence            9999999863

>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}

Probab=83.16  E-value=1.2  Score=36.56  Aligned_cols=31  Identities=29%  Similarity=0.412  Sum_probs=26.3

Q ss_pred             eeecCCCC-CccceeeEee--CCeEEEEeeCCCC
Q 023450          180 RFRLPEST-RPELASAVFE--DGELIVTVPKGGG  210 (282)
Q Consensus       180 RFRLPENA-~pE~VsA~~e--DGVLTVTVPK~e~  210 (282)
                      |.+||-.. .-+..+|.|.  +|.++|++||..+
T Consensus        64 RL~lP~~vved~~~~A~YD~d~g~~~v~lpK~~~   97 (115)
T 3eud_A           64 RLRFPHELIDDERSTAQYDSKDECINVKVAKLNK   97 (115)
T ss_dssp             EEECSSCEECSTTCEEEEETTTTEEEEEEEESST
T ss_pred             EEecCcceecCCCcceEEeCCCcEEEEEEcCCcC
Confidence            89999877 5577788886  9999999999873

>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}

Probab=81.63  E-value=1.6  Score=36.30  Aligned_cols=33  Identities=30%  Similarity=0.393  Sum_probs=28.9

Q ss_pred             eeecCCCC-CccceeeEee--CCeEEEEeeCCCCCC
Q 023450          180 RFRLPEST-RPELASAVFE--DGELIVTVPKGGGLE  212 (282)
Q Consensus       180 RFRLPENA-~pE~VsA~~e--DGVLTVTVPK~e~pe  212 (282)
                      |.+||-.. ..+..+|.|.  .|.|+||+||..+-|
T Consensus        50 RL~LP~~V~e~~~~kA~YD~d~~~~~VtLpK~~~Ge   85 (134)
T 2k8q_A           50 RLRFPHELIDDERSTAQYDSKDECINVKVAKLNKNE   85 (134)
T ss_dssp             EECCSSCEECCSSCEEEEETTTTEEEEEEEESSTTC
T ss_pred             EecCCCeeecCCCcceeEeccCCEEEEEEeCCCCCC
Confidence            89999988 8888999997  899999999986544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	282
d1shsa_	115	b.15.1.1 (A:) Small heat shock protein {Archaeon M	3e-04

>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 115

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 37.7 bits (87), Expect = 3e-04
 Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 12/94 (12%)

Query: 123 VAVEESPDYFKFVAETDGMGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMW--- 179
           +++ E   + K +A   G   V    + ++     + IR      + +  E  +      
Sbjct: 13  ISIIEGDQHIKVIAWLPG---VNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPE 69

Query: 180 ------RFRLPESTRPELASAVFEDGELIVTVPK 207
                   +LP + + E ASA FE+G L V +PK
Sbjct: 70  EEEIYRTIKLPATVKEENASAKFENGVLSVILPK 103

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	282
d1gmea_	150	Small heat shock protein {Wheat (Triticum aestivum	99.65
d1shsa_	115	Small heat shock protein {Archaeon Methanococcus j	99.56
d1rl1a_	92	Suppressor of G2 allele of skp1 homolog, gst1 {Hum	94.37

>d1gmea_ b.15.1.1 (A:) Small heat shock protein {Wheat (Triticum aestivum) [TaxId: 4565]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Wheat (Triticum aestivum) [TaxId: 4565]

Probab=99.65  E-value=3.9e-16  Score=124.21  Aligned_cols=83  Identities=31%  Similarity=0.408  Sum_probs=66.7

Q ss_pred             CccceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccccccccCCe------------eeeecCCC
Q 023450          121 ADVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDM------------WRFRLPES  186 (282)
Q Consensus       121 TdVDVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e~Dk------------WRFRLPEN  186 (282)
                      -++||.|+.++|++.+|+||  ++||+|++   ++|  +++++.+.+..   +.+.+.+.            .+|+||++
T Consensus        43 p~~dv~e~~~~~~i~~~lPG~~~edi~v~v---~~~--~~l~i~~~~~~---~~~~~~~~~~~~e~~~~~f~r~~~LP~~  114 (150)
T d1gmea_          43 ARMDWKETPEAHVFKADLPGVKKEEVKVEV---EDG--NVLVVSGERTK---EKEDKNDKWHRVERSSGKFVRRFRLLED  114 (150)
T ss_dssp             GCEEEEECSSEEEEEEECTTCCGGGEEEEE---ETT--TEEEEEECCCC---CCCCTTCEEEECCCCCCCEEEEEECSSC
T ss_pred             CceeEEECCCEEEEEEEeCCCccCCEEEEE---EEc--cceeEEEEEec---ccccccceeeeeeeccceEEEEEECCCC
Confidence            46899999999999999999  79999995   776  66776665532   11222223            37999999


Q ss_pred             CCccceeeEeeCCeEEEEeeCCCCC
Q 023450          187 TRPELASAVFEDGELIVTVPKGGGL  211 (282)
Q Consensus       187 A~pE~VsA~~eDGVLTVTVPK~e~p  211 (282)
                      ++++.|+|.|+||+|+||+||.++.
T Consensus       115 vd~~~i~A~~~nGvL~I~lpK~~~~  139 (150)
T d1gmea_         115 AKVEEVKAGLENGVLTVTVPKAEVK  139 (150)
T ss_dssp             CCGGGCEEEEETTEEEEEEECCCCC
T ss_pred             eeeceeEEEEECCEEEEEEEcCCcC
Confidence            9999999999999999999997643

>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.56  E-value=4.5e-15  Score=112.41  Aligned_cols=84  Identities=23%  Similarity=0.224  Sum_probs=63.4

Q ss_pred             CccceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCccccc-cc-------cc--ccCCeeeeecCCCCC
Q 023450          121 ADVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELS-SL-------DE--LELDMWRFRLPESTR  188 (282)
Q Consensus       121 TdVDVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~-de-------dE--~e~DkWRFRLPENA~  188 (282)
                      .+||+.|+.+.|++.+++||  ++++.+++   +++   +|.+.+.+.... .+       ++  ......+|+||++.+
T Consensus        11 ~pvdi~e~~~~~~i~~~lPG~~~edi~v~v---~~~---~l~I~~~~~~~~~~~~~~~~~~~~~~~~~f~r~~~lP~~vd   84 (115)
T d1shsa_          11 MPISIIEGDQHIKVIAWLPGVNKEDIILNA---VGD---TLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVK   84 (115)
T ss_dssp             CCEEEEECSSEEEEEEECTTCCGGGEEEEE---ETT---EEEEEEECCCCCCCTTCEEEEECSCCCCEEEEEEECSSCBC
T ss_pred             CceEEEEcCCEEEEEEECCCCCHHHEEEEE---ECC---EEEEEEEeccccccccccEEEEeeecccceEEEEecCCcee
Confidence            47999999999999999999  79999996   665   344444432110 00       00  111223799999999


Q ss_pred             ccceeeEeeCCeEEEEeeCCCC
Q 023450          189 PELASAVFEDGELIVTVPKGGG  210 (282)
Q Consensus       189 pE~VsA~~eDGVLTVTVPK~e~  210 (282)
                      .+.++|.|+||+|+||+||.++
T Consensus        85 ~~~i~A~~~nGvL~I~lpK~~~  106 (115)
T d1shsa_          85 EENASAKFENGVLSVILPKAES  106 (115)
T ss_dssp             GGGCEEEEETTEEEEEEEBCGG
T ss_pred             ecceEEEEECCEEEEEEEeCCC
Confidence            9999999999999999999764

>d1rl1a_ b.15.1.3 (A:) Suppressor of G2 allele of skp1 homolog, gst1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: GS domain
domain: Suppressor of G2 allele of skp1 homolog, gst1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.37  E-value=0.24  Score=34.31  Aligned_cols=78  Identities=8%  Similarity=0.026  Sum_probs=57.9

Q ss_pred             CCccceeecCCeeeEEEecCC--CCceEEEEEEecCCceeEEEecCCcccccccccccCCeeeeecCCCCCccceeeEee
Q 023450          120 DADVAVEESPDYFKFVAETDG--MGEVRAHMVEIHPGVTKIVIRPNGCVELSSLDELELDMWRFRLPESTRPELASAVFE  197 (282)
Q Consensus       120 dTdVDVKETPeAhvFvADlPG--keEVKVeVVEIEpGVtKVVV~~ggrr~~~dedE~e~DkWRFRLPENA~pE~VsA~~e  197 (282)
                      ..+-||..|.+.-...+.+||  +++|+|+   +.+.-.++.+...+.         +.-.+-..|-...++|..+..+.
T Consensus         2 k~ry~W~Qt~~~V~i~i~~~~~~~~~v~v~---~~~~~l~v~~~~~~~---------~~y~~~~~L~~~I~p~~s~~~~~   69 (92)
T d1rl1a_           2 KIKYDWYQTESQVVITLMIKNVQKNDVNVE---FSEKELSALVKLPSG---------EDYNLKLELLHPIIPEQSTFKVL   69 (92)
T ss_dssp             CCCEEEEECSSEEEEEECCCSCCGGGEEEE---CSSSCEEEEEECTTS---------SEEEEEECBSSCCCGGGEEEEEC
T ss_pred             CCceeEEeCCCEEEEEEEeCCCChHheEEE---EecCEEEEEEEcCCC---------cEEEEEEEcCcccCchhcEEEEe
Confidence            456799999998888889999  6788887   466422333322111         11245667999999999999999


Q ss_pred             CCeEEEEeeCCC
Q 023450          198 DGELIVTVPKGG  209 (282)
Q Consensus       198 DGVLTVTVPK~e  209 (282)
                      ++.+.++.-|.+
T Consensus        70 ~~kiei~L~K~~   81 (92)
T d1rl1a_          70 STKIEIKLKKPE   81 (92)
T ss_dssp             SSSEEEEEECSS
T ss_pred             CCEEEEEEEECC
Confidence            999999999975