Citrus Sinensis ID: 023466

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
Protein Sequence
MRRIQCNFSLSYELVFWPQVGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNIFLESSRKPLLHSSDRRSPDDSQIQAETRSTKSRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWITFYIWLLT
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHcEEEEEcEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcHHHHHHHHccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
ccccHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccHHHHHcHHHHHHHHHHHHHHcHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
mrriqcnfslsyelvfwpqVGAIYIWTYVYYVMSLYLNksvsdagtnkdsrihiissgesstniflessrkpllhssdrrspddsqiqaetrstksrfpfLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIgtispfrkvivgesaplrvldSSAALVGEAAIPAMTLVIGANLLSglkrsgvgVSLIMGIIAIRYILLPLLGIVIVKAAYrfgfigsdSLYQFILLLQyavppalaVGTIIQLFETSESECSVILLWTYAVAAFALTLWITFYIWLLT
Flexible Loop (DISEMBL)
MRRIQCNFSLSYELVFWPQVGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIIssgesstniflessrkpllhssdrrspddsqiqaetrstksrfpfldkMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWITFYIWLLT
Low Complexity Region (SEG)
MRRIQCNFSLSYELVFWPQVGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNIFLESSRKPLLHSSDRRSPDDSQIQAETRSTKSRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWITFYIWLLT
Disordered region (IsUnstruct)
***IQCNFSLSYELVFWPQVGAIYIWTYVYYVMSLYLNKSV**********************************************************FLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWITFYIWLL*
Disordered Region (DISOPRED)
****QCNFSLSYELVFWPQVGAIYIWTYVYYV************************************************************************RQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWITFYIWLLT
Disordered Region (DISEMBL)
MRRIQCNFSLSYELVFWPQVGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNIFLESSRKP*******************RSTKSRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWITFYIWLLT
Disordered Region (DISPRO)
***IQCNFSLSYELVFWPQVGAIYIWTYVYYVMSLYL************************************************************FPFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWITFYIWLLT
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (MEMSAT)
ooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRRIQCNFSLSYELVFWPQVGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNIFLESSRKPLLHSSDRRSPDDSQIQAETRSTKSRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWITFYIWLLT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	282	2.2.26 [Sep-21-2011]
P38355	427	Uncharacterized transport	yes	no	0.599	0.395	0.259	5e-05

>sp|P38355|YB8B_YEAST Uncharacterized transporter YBR287W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YBR287W PE=1 SV=1

 Score = 48.5 bits (114), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 80/177 (45%), Gaps = 8/177 (4%)

Query: 102 DKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLR-VLDSSAAL 160
           DK+ Q+     E+I   +   P   + I   V+  I P ++ +  E   +      +   
Sbjct: 237 DKIWQKSCTVFERIRANL--NPPLYSMIFAVVVAAIGPLQRELFMEDGFINNTFAEAVTQ 294

Query: 161 VGEAAIPAMTLVIGANLLSG---LKRSGVGVSLIMGIIAIRYILLP--LLGIVIVKAAYR 215
           +G  +IP + +V+G+NL        ++     L++G I  R IL    LL I+ +   Y 
Sbjct: 295 LGSVSIPLILVVLGSNLYPSAEVFPKTVHHSKLLIGSIIGRMILPSCFLLPIIAIAVKYI 354

Query: 216 FGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTL 272
              I  D ++  +  L    PPA+ +  I QL E  E+E + IL W YAV +  +++
Sbjct: 355 NVSILDDPIFLVVGFLLTVSPPAIQLTQITQLNEFFEAEMADILFWGYAVLSLPVSI 411

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
255575247	390	auxin:hydrogen symporter, putative [Rici	0.833	0.602	0.568	1e-77
296088501	418	unnamed protein product [Vitis vinifera]	0.925	0.624	0.535	8e-77
296088502	379	unnamed protein product [Vitis vinifera]	0.886	0.659	0.5	6e-71
225431659	418	PREDICTED: uncharacterized transporter C	0.886	0.598	0.5	1e-70
118481907	405	unknown [Populus trichocarpa]	0.886	0.617	0.557	1e-68
224115416	388	predicted protein [Populus trichocarpa]	0.826	0.600	0.541	2e-67
356561043	418	PREDICTED: uncharacterized protein LOC10	0.925	0.624	0.496	4e-66
255571127	434	auxin:hydrogen symporter, putative [Rici	0.872	0.566	0.498	2e-64
255575249	417	auxin:hydrogen symporter, putative [Rici	0.882	0.597	0.472	3e-64
18411126	390	auxin efflux carrier-like protein [Arabi	0.829	0.6	0.473	3e-61

>gi|255575247|ref|XP_002528527.1| auxin:hydrogen symporter, putative [Ricinus communis] gi|223532029|gb|EEF33839.1| auxin:hydrogen symporter, putative [Ricinus communis]

 Score =  295 bits (756), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 149/262 (56%), Positives = 189/262 (72%), Gaps = 27/262 (10%)

Query: 20  VGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNIFLESSRKPLLHSSDR 79
           VGA+YIWTYVY++M +Y +KS     TN                   ES R+ LL S D 
Sbjct: 155 VGAVYIWTYVYFIMRIYADKSNEAVDTN-------------------ESFRESLLPSRDI 195

Query: 80  RSPDDSQIQAETRSTKSRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISP 139
            +   + + A+    ++         QRI  F  K+DLKM+FAPSTIAAIIGF IG++S 
Sbjct: 196 PASSSNSLHAQLLRKRTF--------QRIKNFAGKVDLKMVFAPSTIAAIIGFTIGSVSA 247

Query: 140 FRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRY 199
            RK+I+G SAPLRVLDSSAAL+G+A IP+MTL++GANLL GLKRSGV + +I+GII +RY
Sbjct: 248 IRKLIIGTSAPLRVLDSSAALLGDATIPSMTLIVGANLLKGLKRSGVSMWVIVGIIMVRY 307

Query: 200 ILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVIL 259
           +L+P++GI +VKAAY FG +GSDSLYQF+LLLQYA+PPA+ VG I QLF+  ESECSVI+
Sbjct: 308 VLMPVMGIGVVKAAYHFGMVGSDSLYQFVLLLQYALPPAMTVGIIAQLFQAGESECSVIM 367

Query: 260 LWTYAVAAFALTLWITFYIWLL 281
           LW+YAVA FALTLW TFY+WLL
Sbjct: 368 LWSYAVAGFALTLWSTFYMWLL 389

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088501|emb|CBI37492.3| unnamed protein product [Vitis vinifera]

 Score =  293 bits (749), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 143/267 (53%), Positives = 197/267 (73%), Gaps = 6/267 (2%)

Query: 20  VGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNIFLESSRKPLLHSSD- 78
           +GAI IW+YVY +M +  NK   +   + DS I I +SGE+   I  E   + LL S D 
Sbjct: 154 IGAIGIWSYVYTIMRISANKCKKEINLD-DSTISIRTSGET-LEILSEGCTEALLPSKDC 211

Query: 79  ---RRSPDDSQIQAETRSTKSRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIG 135
              R   D+ ++       K + PFL+K++Q++    EKIDLK +FAPSTI  I+GF IG
Sbjct: 212 PSSRECSDEVELAHAGSEGKQKVPFLEKIKQQVEILMEKIDLKKVFAPSTIGVIVGFFIG 271

Query: 136 TISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGII 195
            ISP RK+I+G+SAPL V++SSA  VGEAA+P+ TL++GANLL GLK S V + +I+GI+
Sbjct: 272 LISPIRKLIIGDSAPLHVIESSAYFVGEAAVPSTTLIMGANLLKGLKGSDVSIVVILGIM 331

Query: 196 AIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESEC 255
           A+RYI LPLLG+V+VKAA+ FG +GS+SL+QF+L+LQYA+PPA++ GT+ QLFE  +SEC
Sbjct: 332 AVRYIALPLLGVVVVKAAHHFGLVGSNSLFQFVLMLQYALPPAMSTGTMSQLFEFGQSEC 391

Query: 256 SVILLWTYAVAAFALTLWITFYIWLLT 282
           SVI+LWTYAVAAF+LTLW +F++WL++
Sbjct: 392 SVIMLWTYAVAAFSLTLWSSFFMWLVS 418

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088502|emb|CBI37493.3| unnamed protein product [Vitis vinifera]

 Score =  273 bits (698), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 139/278 (50%), Positives = 190/278 (68%), Gaps = 28/278 (10%)

Query: 20  VGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNIFLESSRKPLLHSSD- 78
           +GAI +WTYVY +M +        + T     I++ +S  S     + +SR+ L  SSD 
Sbjct: 115 LGAIGVWTYVYMIMRM--------SATKCKGEINLCNSTTS-----VRTSREALEISSDC 161

Query: 79  --------RRSP------DDSQIQAETRSTKSRFPFLDKMRQRINKFTEKIDLKMIFAPS 124
                   R SP      D+ ++  +    KS  PF +K++Q++  F EK + K +F PS
Sbjct: 162 CTEALLPPRDSPRSGNWSDEEELPHDGSEEKSEVPFSEKIKQKVKIFMEKTNFKQVFTPS 221

Query: 125 TIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRS 184
           TI  I GF IG I P RK+I+G+SAPLRV++SSA L+GEAAIP+ TL++GANLLSGLK S
Sbjct: 222 TIGVIFGFFIGLIPPIRKLIIGDSAPLRVIESSATLLGEAAIPSTTLIMGANLLSGLKGS 281

Query: 185 GVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTI 244
            V + +I+GI+A+RYI LPLLG+V+VKAA  FG +GS+ L+QF+L+LQYAVPPA+  G I
Sbjct: 282 DVSIVVILGIVAVRYIFLPLLGVVVVKAATHFGLVGSNLLFQFVLMLQYAVPPAMGTGVI 341

Query: 245 IQLFETSESECSVILLWTYAVAAFALTLWITFYIWLLT 282
            QLF+  +SECSVI+LWTYAVA FALTLW TF++WL++
Sbjct: 342 CQLFQFGQSECSVIMLWTYAVAGFALTLWSTFFMWLVS 379

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431659|ref|XP_002264606.1| PREDICTED: uncharacterized transporter C5D6.04 isoform 1 [Vitis vinifera] gi|359476983|ref|XP_003631924.1| PREDICTED: uncharacterized transporter C5D6.04 isoform 2 [Vitis vinifera]

 Score =  272 bits (696), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 139/278 (50%), Positives = 190/278 (68%), Gaps = 28/278 (10%)

Query: 20  VGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNIFLESSRKPLLHSSD- 78
           +GAI +WTYVY +M +        + T     I++ +S  S     + +SR+ L  SSD 
Sbjct: 154 LGAIGVWTYVYMIMRM--------SATKCKGEINLCNSTTS-----VRTSREALEISSDC 200

Query: 79  --------RRSP------DDSQIQAETRSTKSRFPFLDKMRQRINKFTEKIDLKMIFAPS 124
                   R SP      D+ ++  +    KS  PF +K++Q++  F EK + K +F PS
Sbjct: 201 CTEALLPPRDSPRSGNWSDEEELPHDGSEEKSEVPFSEKIKQKVKIFMEKTNFKQVFTPS 260

Query: 125 TIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRS 184
           TI  I GF IG I P RK+I+G+SAPLRV++SSA L+GEAAIP+ TL++GANLLSGLK S
Sbjct: 261 TIGVIFGFFIGLIPPIRKLIIGDSAPLRVIESSATLLGEAAIPSTTLIMGANLLSGLKGS 320

Query: 185 GVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTI 244
            V + +I+GI+A+RYI LPLLG+V+VKAA  FG +GS+ L+QF+L+LQYAVPPA+  G I
Sbjct: 321 DVSIVVILGIVAVRYIFLPLLGVVVVKAATHFGLVGSNLLFQFVLMLQYAVPPAMGTGVI 380

Query: 245 IQLFETSESECSVILLWTYAVAAFALTLWITFYIWLLT 282
            QLF+  +SECSVI+LWTYAVA FALTLW TF++WL++
Sbjct: 381 CQLFQFGQSECSVIMLWTYAVAGFALTLWSTFFMWLVS 418

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118481907|gb|ABK92888.1| unknown [Populus trichocarpa]

 Score =  266 bits (679), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 146/262 (55%), Positives = 192/262 (73%), Gaps = 12/262 (4%)

Query: 20  VGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNIFLESSRKPLLHSSDR 79
           VGAIYIWTYVY +M +Y +KS  D  TN+      IS  ES   + L  SRK     S  
Sbjct: 155 VGAIYIWTYVYIIMRIYSDKSAEDTDTNQP-----ISDSESYKALLL--SRKN--SGSSG 205

Query: 80  RSPDDSQIQAETRSTKSRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISP 139
            S +D   +     +  +   ++K+ Q + KFT KI+LKM+FAP+TIAAI GF+IGT+SP
Sbjct: 206 CSKED---ELPLTISGEKLTVMEKIFQSVKKFTAKINLKMVFAPATIAAICGFIIGTVSP 262

Query: 140 FRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRY 199
            R +++G+SAPLRV+D SA+L+GEA IP MTL++G+NLL GL++SGV VS+I+GI+A+R 
Sbjct: 263 IRILMIGDSAPLRVIDRSASLLGEATIPCMTLIVGSNLLRGLRKSGVSVSVIVGIVAVRN 322

Query: 200 ILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVIL 259
           I LPL+GI IVKAA+  G + SDSLYQFILLLQYA+PPA+ VG I QLF+  E ECSVI+
Sbjct: 323 IFLPLIGIGIVKAAHHLGMVESDSLYQFILLLQYALPPAMTVGVIAQLFKAGEGECSVIM 382

Query: 260 LWTYAVAAFALTLWITFYIWLL 281
           LW+YA++A +LTLW TFY+WLL
Sbjct: 383 LWSYALSALSLTLWSTFYMWLL 404

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115416|ref|XP_002317029.1| predicted protein [Populus trichocarpa] gi|222860094|gb|EEE97641.1| predicted protein [Populus trichocarpa]

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 142/262 (54%), Positives = 185/262 (70%), Gaps = 29/262 (11%)

Query: 20  VGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNIFLESSRKPLLHSSDR 79
           VGAIYIWTYVY +M +Y +KS  D  TN+      IS  ES   + L             
Sbjct: 155 VGAIYIWTYVYIIMRIYSDKSAEDTDTNQP-----ISDSESYKALLL------------- 196

Query: 80  RSPDDSQIQAETRSTKSRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISP 139
                      +R       F++K+ Q + KFT KI+LKM+FAP+TIAAI GF+IGT+SP
Sbjct: 197 -----------SRKNSGSSGFMEKIFQSVKKFTAKINLKMVFAPATIAAICGFIIGTVSP 245

Query: 140 FRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRY 199
            R +++G+SAPLRV+D SA+L+GEA IP MTL++G+NLL GL++SGV VS+I+GI+A+R 
Sbjct: 246 IRILMIGDSAPLRVIDRSASLLGEATIPCMTLIVGSNLLRGLRKSGVSVSVIVGIVAVRN 305

Query: 200 ILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVIL 259
           I LPL+GI IVKAA+  G + SDSLYQFILLLQYA+PPA+ VG I QLF+  E ECSVI+
Sbjct: 306 IFLPLIGIGIVKAAHHLGMVESDSLYQFILLLQYALPPAMTVGVIAQLFKAGEGECSVIM 365

Query: 260 LWTYAVAAFALTLWITFYIWLL 281
           LW+YA++A +LTLW TFY+WLL
Sbjct: 366 LWSYALSALSLTLWSTFYMWLL 387

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356561043|ref|XP_003548795.1| PREDICTED: uncharacterized protein LOC100804439 [Glycine max]

 Score =  257 bits (657), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 134/270 (49%), Positives = 185/270 (68%), Gaps = 9/270 (3%)

Query: 16  FWPQVGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNIFLESSRKPLLH 75
           F   VG ++IWTY++ VM    +KS +    N DS I    + E     F  +  + LL 
Sbjct: 152 FSTGVGTVFIWTYLFIVMDTSTDKS-TKKEINSDSVICSAGTLER----FPPNITESLLT 206

Query: 76  SSDRRSPDDSQIQAETR----STKSRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIG 131
           S+D  S DD  IQ +      +   + P LD +   I K    + ++ +F PSTIA IIG
Sbjct: 207 STDSVSIDDLSIQPDHELPYDNNGRKTPILDNITSSITKCMGYVKVETVFTPSTIAVIIG 266

Query: 132 FVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLI 191
           F IG ISP +K++VG+SAP RV+ SSA+LVGEA I +MTLV+GANLL+GLK+SG+ + LI
Sbjct: 267 FAIGAISPIKKLVVGDSAPFRVIISSASLVGEATIVSMTLVVGANLLNGLKKSGISIFLI 326

Query: 192 MGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETS 251
           +GI+ +R+I+ P+LGI+IVKAAY +GFIGS SLYQF+L+LQYA+PPA  VGT+ Q+    
Sbjct: 327 IGIMVVRFIISPILGILIVKAAYYWGFIGSYSLYQFVLMLQYALPPATIVGTVAQMLGNG 386

Query: 252 ESECSVILLWTYAVAAFALTLWITFYIWLL 281
           ESECS+I++WTY +A F+LTLW TF++W+L
Sbjct: 387 ESECSLIMIWTYFIATFSLTLWCTFFMWML 416

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255571127|ref|XP_002526514.1| auxin:hydrogen symporter, putative [Ricinus communis] gi|223534189|gb|EEF35905.1| auxin:hydrogen symporter, putative [Ricinus communis]

 Score =  252 bits (643), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 130/261 (49%), Positives = 185/261 (70%), Gaps = 15/261 (5%)

Query: 22  AIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNIFLESSRKPLLHSSDRRS 81
           AIYIW+YVYY+M    +    +   N ++ I I   GE+S   + E+     L S D   
Sbjct: 189 AIYIWSYVYYIMRASASDESKEINGN-NTTIIISPCGETSD--YTEA-----LLSEDV-- 238

Query: 82  PDDSQIQAETRSTKSRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFR 141
           P    + AE + +      L ++RQ I++   K++++M+ APSTIAA+ GF IG ISP R
Sbjct: 239 PTTENLPAELQES-----ILQRIRQCISRIAGKMNVRMVLAPSTIAAMAGFAIGIISPIR 293

Query: 142 KVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRYIL 201
           K+++G+SAPLRV+ SSA L+GEAAIP++TL++GANLL GLKRSG  +S ++GII +R+++
Sbjct: 294 KIMIGDSAPLRVIYSSANLLGEAAIPSITLIVGANLLRGLKRSGASISAMIGIIGVRFVV 353

Query: 202 LPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLW 261
           LP +GI +VKAA+ FG + SD LYQF L+LQ+AVPPA+ +GTI QL  T ESECSVI+LW
Sbjct: 354 LPPIGIGVVKAAHHFGIVESDPLYQFTLMLQFAVPPAMNIGTIAQLVNTGESECSVIMLW 413

Query: 262 TYAVAAFALTLWITFYIWLLT 282
           TYAVA+ ++TLW  F++WL++
Sbjct: 414 TYAVASVSVTLWSAFFMWLVS 434

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575249|ref|XP_002528528.1| auxin:hydrogen symporter, putative [Ricinus communis] gi|223532030|gb|EEF33840.1| auxin:hydrogen symporter, putative [Ricinus communis]

 Score =  251 bits (640), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 129/273 (47%), Positives = 184/273 (67%), Gaps = 24/273 (8%)

Query: 20  VGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNI--FLESSRKP----- 72
           +GAIY+W+YVY +M       +S +  NK+ R         S N    L S   P     
Sbjct: 159 IGAIYMWSYVYNMMR------ISASEINKEVRRKDTEGTPESMNSGNLLPSKELPISAEL 212

Query: 73  ---LLHSSDRRSPDDSQIQAETRSTKSRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAI 129
              LLH        D  ++  T +  S     +K++Q +   +EK++LK IFAPSTI AI
Sbjct: 213 TYGLLHPGTE---SDKIVKTFTWTQVS-----NKIKQHLRMISEKLNLKAIFAPSTIGAI 264

Query: 130 IGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVS 189
           +GF++G +   RK+++G +APL V++ SA+LVG+AAIPA+TL++G NLL GLK SG+ +S
Sbjct: 265 VGFIVGAVPQIRKLLIGTNAPLHVIEDSASLVGDAAIPAVTLIVGGNLLRGLKGSGIQLS 324

Query: 190 LIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFE 249
           L+ GI+ +RY++LPLLGIVIV+ A  FG +GSD LYQFILL+Q+AVPPA+ +GT+ QLF 
Sbjct: 325 LVFGILGVRYVILPLLGIVIVRGAVHFGLVGSDPLYQFILLVQFAVPPAMNIGTMTQLFG 384

Query: 250 TSESECSVILLWTYAVAAFALTLWITFYIWLLT 282
           T +SECSVI+LWTYA+A+ +LTLW T ++W++T
Sbjct: 385 TGQSECSVIMLWTYAMASISLTLWSTLFLWMVT 417

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18411126|ref|NP_565133.1| auxin efflux carrier-like protein [Arabidopsis thaliana] gi|30699180|ref|NP_849892.1| auxin efflux carrier-like protein [Arabidopsis thaliana] gi|12323984|gb|AAG51955.1|AC015450_16 unknown protein; 51686-53591 [Arabidopsis thaliana] gi|20466518|gb|AAM20576.1| unknown protein [Arabidopsis thaliana] gi|23198174|gb|AAN15614.1| unknown protein [Arabidopsis thaliana] gi|110742076|dbj|BAE98969.1| hypothetical protein [Arabidopsis thaliana] gi|332197733|gb|AEE35854.1| auxin efflux carrier-like protein [Arabidopsis thaliana] gi|332197734|gb|AEE35855.1| auxin efflux carrier-like protein [Arabidopsis thaliana]

 Score =  241 bits (614), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 124/262 (47%), Positives = 176/262 (67%), Gaps = 28/262 (10%)

Query: 20  VGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNIFLESSRKPLLHSSDR 79
           +G+IYIWTYVY +M +  N  V               S ES+     +S + PL+ S + 
Sbjct: 156 MGSIYIWTYVYNLMRVLSNSPVETP-----------PSVESN----YDSYKVPLISSKEE 200

Query: 80  RSPDDSQIQAETRSTKSRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISP 139
                     E      R+   +K+++R+   ++K++LK IFAPSTIAA+I  VIG I+P
Sbjct: 201 ----------ENNQKAGRW---EKVKRRLVSLSQKVNLKTIFAPSTIAAMIALVIGLITP 247

Query: 140 FRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRY 199
            RK+I+G  APLRVL  S  LVG+ A+PAMT++IG NLL GL+ SG+ +S I+G++  RY
Sbjct: 248 LRKLIIGTEAPLRVLQDSVTLVGDGAVPAMTMIIGGNLLKGLRSSGMKMSSIIGVLVARY 307

Query: 200 ILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVIL 259
           +LLP+ G++IV+ AY+   + S+ LYQF+LLLQYAVPPA+ +GTI QLF T ESECSVI+
Sbjct: 308 VLLPMSGVLIVRGAYKLDLVTSEPLYQFVLLLQYAVPPAMNLGTITQLFGTGESECSVIM 367

Query: 260 LWTYAVAAFALTLWITFYIWLL 281
           LWTY++A+ ALT+W TF++WL+
Sbjct: 368 LWTYSLASIALTVWPTFFMWLV 389

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
TAIR|locus:2011731	390	AT1G76520 "AT1G76520" [Arabido	0.638	0.461	0.572	1.4e-62
TAIR|locus:2011746	415	AT1G76530 "AT1G76530" [Arabido	0.829	0.563	0.435	2.8e-50
TAIR|locus:2156847	395	AT5G65980 "AT5G65980" [Arabido	0.588	0.420	0.481	1.4e-46
TAIR|locus:2053908	396	AT2G17500 [Arabidopsis thalian	0.758	0.540	0.398	1.5e-42
TAIR|locus:2026366	457	AT1G71090 "AT1G71090" [Arabido	0.631	0.389	0.346	5.7e-29
TAIR|locus:2185123	431	AT5G01990 "AT5G01990" [Arabido	0.950	0.621	0.268	7e-24
CGD|CAL0005563	546	ECM3 [Candida albicans (taxid:	0.606	0.313	0.245	4.8e-07
UNIPROTKB|Q5ALL5	546	ECM3 "Putative uncharacterized	0.606	0.313	0.245	4.8e-07
SGD|S000000491	427	YBR287W "Protein of unknown fu	0.879	0.580	0.245	1.6e-06
POMBASE|SPAC5D6.04	452	SPAC5D6.04 "auxin family trans	0.833	0.519	0.206	3.8e-06

TAIR|locus:2011731 AT1G76520 "AT1G76520" [Arabidopsis thaliana (taxid:3702)]

 Score = 573 (206.8 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
 Identities = 103/180 (57%), Positives = 145/180 (80%)

Query:   102 DKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALV 161
             +K+++R+   ++K++LK IFAPSTIAA+I  VIG I+P RK+I+G  APLRVL  S  LV
Sbjct:   210 EKVKRRLVSLSQKVNLKTIFAPSTIAAMIALVIGLITPLRKLIIGTEAPLRVLQDSVTLV 269

Query:   162 GEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGS 221
             G+ A+PAMT++IG NLL GL+ SG+ +S I+G++  RY+LLP+ G++IV+ AY+   + S
Sbjct:   270 GDGAVPAMTMIIGGNLLKGLRSSGMKMSSIIGVLVARYVLLPMSGVLIVRGAYKLDLVTS 329

Query:   222 DSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWITFYIWLL 281
             + LYQF+LLLQYAVPPA+ +GTI QLF T ESECSVI+LWTY++A+ ALT+W TF++WL+
Sbjct:   330 EPLYQFVLLLQYAVPPAMNLGTITQLFGTGESECSVIMLWTYSLASIALTVWPTFFMWLV 389

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0015824 "proline transport" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

TAIR|locus:2011746 AT1G76530 "AT1G76530" [Arabidopsis thaliana (taxid:3702)]

 Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
 Identities = 112/257 (43%), Positives = 169/257 (65%)

Query:    32 VMSLYLNKSVSDAGTNKDSRIHIISSG-ESSTNIFLESSRKPLLHSSDRRSPDDSQIQAE 90
             +M LY+N     + +  ++  H I S  + S  + L SS++      + +  D+ Q+   
Sbjct:   176 LMDLYINLMRVLSNSPVETHTHSIESNYDDSCKVQLISSKE------EEKEEDNHQV--- 226

Query:    91 TRSTKSRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAP 150
                   R+   ++++QR+   ++K++L  IFAP+TIAAII  VIG I+P R +I+G  AP
Sbjct:   227 -----GRW---EEVKQRVVSLSKKVNLGSIFAPATIAAIIALVIGLITPLRNLIIGTVAP 278

Query:   151 LRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVS-----LIMGIIAIRYILLPLL 205
              RV+  S  L+G+ AIPAMTL++G NLL G++RS V  S      I+G++  RYILLP+ 
Sbjct:   279 FRVIQDSLTLLGDGAIPAMTLILGGNLLKGMRRSEVRSSEMKNSCIIGVLVARYILLPVS 338

Query:   206 GIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAV 265
             G+++V+ AY+   + S+ LYQF+LLLQYAVPPA+ +GT  QLF   ESECSVI+LWTY++
Sbjct:   339 GVLLVRGAYKLDLVTSEPLYQFVLLLQYAVPPAMNLGTKTQLFGAGESECSVIMLWTYSL 398

Query:   266 AAFALTLWITFYIWLLT 282
             AA +LT+W TF++WL+T
Sbjct:   399 AAVSLTVWPTFFMWLVT 415

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2156847 AT5G65980 "AT5G65980" [Arabidopsis thaliana (taxid:3702)]

 Score = 453 (164.5 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
 Identities = 80/166 (48%), Positives = 124/166 (74%)

Query:   117 LKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGAN 176
             L+ +FAP TI AI+GFV G  +  R +I+GE+APLRV+  S  L+GE  IP +TL++G N
Sbjct:   230 LEELFAPPTIGAILGFVFGATNWLRNLIIGENAPLRVIQDSVKLLGEGTIPCITLILGGN 289

Query:   177 LLSGLKRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVP 236
             L+ GL+ S V  S+I+G+I +RYILLP++G+ +V+ A   G++  D L++++L+LQ+A+P
Sbjct:   290 LIQGLRSSAVKKSVIVGVIIVRYILLPVVGVGVVQLAGNLGYLPPDPLFRYVLMLQFALP 349

Query:   237 PALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWITFYIWLLT 282
             PA+ + T+ QLF+ ++ ECSVI LWTY VA+ ALT+W T ++ +L+
Sbjct:   350 PAMNISTMAQLFDVAQDECSVIFLWTYLVASLALTVWSTIFLSILS 395

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2053908 AT2G17500 [Arabidopsis thaliana (taxid:3702)]

 Score = 450 (163.5 bits), Expect = 1.5e-42, P = 1.5e-42
 Identities = 90/226 (39%), Positives = 146/226 (64%)

Query:    59 ESSTNIFLESSRKPLL--HSSDRR-SPDDSQIQAETRSTKSRFPFLDKMRQRINKFTEKI 115
             E S  I ++SS   L   H +    +P+D     E +  K +  F    R+ ++ F  +I
Sbjct:   179 EESEKIAIKSSNSDLEADHKTHLLGAPEDK----ENKVVKEKTGF---WRKGVD-FLHEI 230

Query:   116 DLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGA 175
              L+ + AP T+ AIIGF+ G +   R +I+G+ APLR++ S+A L+G+  IP MT+++G 
Sbjct:   231 -LEELLAPPTLGAIIGFIFGAVRWLRNLIIGDDAPLRIVQSTAKLLGDGTIPCMTIILGG 289

Query:   176 NLLSGLKRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAV 235
             NL+ GL+ S V   +++GI+ +RYI +P++GI IV  A   GF+ +D L+Q++L+LQ+ +
Sbjct:   290 NLIQGLRSSAVKPMVVLGIVCVRYIAMPIIGIGIVLTAANLGFLPADPLFQYVLMLQFTL 349

Query:   236 PPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWITFYIWLL 281
             PPA+ +GT+ QL+  ++ ECSV++LWTY VA  ALT+W T ++ LL
Sbjct:   350 PPAMNIGTMTQLYNVAQDECSVLMLWTYLVAILALTVWSTIFLHLL 395

GO:0009507 "chloroplast" evidence=ISM

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2026366 AT1G71090 "AT1G71090" [Arabidopsis thaliana (taxid:3702)]

 Score = 298 (110.0 bits), Expect = 5.7e-29, Sum P(2) = 5.7e-29
 Identities = 62/179 (34%), Positives = 103/179 (57%)

Query:   103 KMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVG 162
             ++ +RI    E+  +K I  P TIA+++  +IG++   + V+ G  APL  +  S  ++G
Sbjct:   269 RVMRRIRVVAEQTPVKHILQPPTIASLLAIIIGSVPQLKSVVFGYDAPLSFITDSLNIMG 328

Query:   163 EAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGS- 221
              A +P++ LV+G  L  G   S +G+   +GI   R ++LPL+GI IV +A + G I S 
Sbjct:   329 SAMVPSVMLVLGGMLSEGPNESTLGLRTTIGISVARLLVLPLVGIGIVMSADKLGLISSA 388

Query:   222 DSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWITFYIWL 280
             D +++F+LLLQY+ P A+ +G I  L   +  E S +L W +  A  +LT +I  +  L
Sbjct:   389 DPMFKFVLLLQYSTPSAILLGAIASLRGYAVREASALLFWQHIFALLSLTFYIVIFFKL 447

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

TAIR|locus:2185123 AT5G01990 "AT5G01990" [Arabidopsis thaliana (taxid:3702)]

 Score = 276 (102.2 bits), Expect = 7.0e-24, P = 7.0e-24
 Identities = 75/279 (26%), Positives = 134/279 (48%)

Query:     5 QCNFSLSYELVFWPQVGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNI 64
             +C+   +  + F   VGAI ++TYVY + +    +       N   +   + +      +
Sbjct:   161 KCSIDGTAYISFGQWVGAIILYTYVYQMFAPP-PEGFDAEEENLALKTLPVDAAPEQVPL 219

Query:    65 FLESSRKPLLHSSDRRSPDDSQIQAETRSTKSRFPFLDKMRQRINKFTEKIDLKMIFAPS 124
               ++  K    + D      ++ +    S K       K+ Q      EK+ LK I  P+
Sbjct:   220 LTQNFPKDFSPTQDLLPVQSTEPRGRGVSRKG------KIAQIFVFLYEKLKLKQIVQPA 273

Query:   125 TIAAIIGFVIGTISPF-RKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKR 183
              +A+I+  ++G I PF +K+I    APL     S  ++G+A IP + L +G NL++G   
Sbjct:   274 IVASILAMILGAI-PFTKKLIFTNGAPLFFFTDSCMILGDAMIPCILLALGGNLINGPGS 332

Query:   184 SGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFI-GSDSLYQFILLLQYAVPPALAVG 242
             S +G      II  R +L+P +G+ IV  A + GF+   D +++F+LLLQ+ +P ++  G
Sbjct:   333 SKLGFKTTAAIIIGRLVLVPPVGLGIVTVADKLGFLPADDKMFRFVLLLQHTMPTSVLSG 392

Query:   243 TIIQLFETSESECSVILLWTYAVAAFALTLWITFYIWLL 281
              +  L      E + +L W +  A F++  W+  YI +L
Sbjct:   393 AVANLRGCGR-ESAAVLFWVHIFAIFSMAGWMVLYINIL 430

GO:0009672 "auxin:hydrogen symporter activity" evidence=ISS

GO:0009926 "auxin polar transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

CGD|CAL0005563 ECM3 [Candida albicans (taxid:5476)]

 Score = 143 (55.4 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 46/187 (24%), Positives = 85/187 (45%)

Query:   103 KMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVG----------ESAPLR 152
             K   ++  + +++  K +  PS+++ II   I    P + + V           E  PL 
Sbjct:   347 KAESKVKNYLKQL-YKNVTTPSSLSLIISIAIAMAPPLKALFVNSNFYMPNAPDELPPLS 405

Query:   153 VLDSSAALVGEAAIPAMTLVIGANLLS-GLKRSGVGVSLIMGIIAI-RYILLPLLGIVIV 210
              +    + VG A++P   +++G  L    +K+   G      +I I R I++P+ G+ + 
Sbjct:   406 FIIDFTSYVGAASVPLGLILLGTTLARLQVKKMPPGFWKTALLITIARLIIIPIFGVGVT 465

Query:   211 KAAYRFGFIGSDSLYQFILLLQYAVPPA--LAVGTIIQLFETSESECSVILLWTYAVAAF 268
                Y+ G+ GSD L +F+ +L++ +P A  L   T       SE    +  L    +  +
Sbjct:   466 TGFYKGGWYGSDILVRFVSVLEFGLPNATSLVYFTAFYTDPLSEEHLQMDCLAICLICQY 525

Query:   269 ALTLWIT 275
             A+ LWIT
Sbjct:   526 AI-LWIT 531

GO:0003674 "molecular_function" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0031505 "fungal-type cell wall organization" evidence=IEA

UNIPROTKB|Q5ALL5 ECM3 "Putative uncharacterized protein ECM3" [Candida albicans SC5314 (taxid:237561)]

 Score = 143 (55.4 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 46/187 (24%), Positives = 85/187 (45%)

Query:   103 KMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVG----------ESAPLR 152
             K   ++  + +++  K +  PS+++ II   I    P + + V           E  PL 
Sbjct:   347 KAESKVKNYLKQL-YKNVTTPSSLSLIISIAIAMAPPLKALFVNSNFYMPNAPDELPPLS 405

Query:   153 VLDSSAALVGEAAIPAMTLVIGANLLS-GLKRSGVGVSLIMGIIAI-RYILLPLLGIVIV 210
              +    + VG A++P   +++G  L    +K+   G      +I I R I++P+ G+ + 
Sbjct:   406 FIIDFTSYVGAASVPLGLILLGTTLARLQVKKMPPGFWKTALLITIARLIIIPIFGVGVT 465

Query:   211 KAAYRFGFIGSDSLYQFILLLQYAVPPA--LAVGTIIQLFETSESECSVILLWTYAVAAF 268
                Y+ G+ GSD L +F+ +L++ +P A  L   T       SE    +  L    +  +
Sbjct:   466 TGFYKGGWYGSDILVRFVSVLEFGLPNATSLVYFTAFYTDPLSEEHLQMDCLAICLICQY 525

Query:   269 ALTLWIT 275
             A+ LWIT
Sbjct:   526 AI-LWIT 531

GO:0003674 "molecular_function" evidence=ND

SGD|S000000491 YBR287W "Protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 66/269 (24%), Positives = 116/269 (43%)

Query:    12 YELVFWPQVGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSR--IHIISSGESSTNIFLESS 69
             Y L+F  Q+G +  W++ Y       NK +  +G N        + S  E + NI  E  
Sbjct:   156 YLLIF-QQIGQMLRWSWGY-------NKLMKWSGENTQHMPPSQVQSLLERTPNIDNEEL 207

Query:    70 RKPLLHSSDRRSPDDSQIQAETRSTKSRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAI 129
                     +    +++++ +   S+ S     DK+ Q+     E+I   +   P   + I
Sbjct:   208 VNEEQEEQELLEEENNRMNSSFLSSSS---IGDKIWQKSCTVFERIRANL--NPPLYSMI 262

Query:   130 IGFVIGTISPFRKVIVGESAPLRVLDSSAAL-VGEAAIPAMTLVIGANLLSGLKRSGVGV 188
                V+  I P ++ +  E   +    + A   +G  +IP + +V+G+NL    +     V
Sbjct:   263 FAVVVAAIGPLQRELFMEDGFINNTFAEAVTQLGSVSIPLILVVLGSNLYPSAEVFPKTV 322

Query:   189 ---SLIMGIIAIRYILLP--LLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGT 243
                 L++G I  R IL    LL I+ +   Y    I  D ++  +  L    PPA+ +  
Sbjct:   323 HHSKLLIGSIIGRMILPSCFLLPIIAIAVKYINVSILDDPIFLVVGFLLTVSPPAIQLTQ 382

Query:   244 IIQLFETSESECSVILLWTYAVAAFALTL 272
             I QL E  E+E + IL W YAV +  +++
Sbjct:   383 ITQLNEFFEAEMADILFWGYAVLSLPVSI 411

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISM;IEA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

POMBASE|SPAC5D6.04 SPAC5D6.04 "auxin family transmembrane transporter (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 134 (52.2 bits), Expect = 3.8e-06, P = 3.8e-06
 Identities = 52/252 (20%), Positives = 110/252 (43%)

Query:    38 NKSVSDAGTNKDSRIHIISSGESSTNI--FLESSRKPLLHSSDRRSPDDSQIQAETRSTK 95
             N+S S +  N++   ++++S  +   +   ++++    + +       +  +Q ET S +
Sbjct:   195 NRSWSHSDVNEEEIQNLLASSANVDGVQNSVQANEGSTVQTDSSAISKNDNVQVET-SNE 253

Query:    96 SRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLR-VL 154
                 F      +I+KF   + L   F+P   +  I   I  + P ++    E + +   +
Sbjct:   254 EVGGF-GAASSKISKFI--VLLLDFFSPPLYSLFIALFIAVVPPLQRFFFEEGSFVEGSI 310

Query:   155 DSSAALVGEAAIPAMTLVIGANLLSGLK--------RSGVGVSLIMGIIAIRYILLPLLG 206
              S   + G+ A+P + +V+GA+L + +         R      +I+  +  R +++PL  
Sbjct:   311 TSGIRMAGQVAVPMILVVLGASLATDISKTEPTQEVRKNNDTRVIIVCLLGRMVVVPLAL 370

Query:   207 IVIVKAAYRFGFIGS--DSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYA 264
             +        F  I +  D ++  ++ L    P A+ +  I QL    E EC+ +L W+YA
Sbjct:   371 LPAFSLLSYFSEISTVDDPVFVVVIFLLVGSPTAIQLTQICQLNGVFERECAKVLWWSYA 430

Query:   265 VAAFALTLWITF 276
             V     +L + F
Sbjct:   431 VFTPPNSLLLAF 442


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.139   0.405    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      282       282   0.00083  115 3  11 22  0.42    33
                                                     33  0.42    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  585 (62 KB)
  Total size of DFA:  175 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.22u 0.11s 24.33t   Elapsed:  00:00:02
  Total cpu time:  24.22u 0.11s 24.33t   Elapsed:  00:00:02
  Start:  Fri May 10 04:01:41 2013   End:  Fri May 10 04:01:43 2013

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0016021 "integral to membrane" evidence=ISM

GO:0022857 "transmembrane transporter activity" evidence=ISM

GO:0055085 "transmembrane transport" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00005992001 SubName- Full=Chromosome chr4 scaffold_162, whole genome shotgun sequence; (418 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	282
pfam03547	321	pfam03547, Mem_trans, Membrane transport protein	1e-25
COG0679	311	COG0679, COG0679, Predicted permeases [General fun	3e-04

>gnl|CDD|217608 pfam03547, Mem_trans, Membrane transport protein

 Score =  102 bits (257), Expect = 1e-25
 Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 11/176 (6%)

Query: 99  PFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSA 158
              D            + LK+I  P T A+++G ++G +     +I  E      +  S 
Sbjct: 157 ESGDTSGSMTLLILIVVLLKLILNPPTYASLLGLILGLVGFLLPLIFPE-----FIQDSI 211

Query: 159 ALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGF 218
           +++G+AAIP     +G  L  G  +S +G +     + +R IL+PL+ + IV        
Sbjct: 212 SILGDAAIPMALFSLGLTLALGKLKSSLGAATATIHLILRLILMPLVMLGIVLL------ 265

Query: 219 IGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWI 274
           +G   L   + +L+ A+PPA+ +G I QL+   E E S ++ WT  +A   L LWI
Sbjct: 266 LGLRGLTLLVAILEAALPPAIVLGVIAQLYNVDEEEASTVVFWTTLLALLTLPLWI 321

This family includes auxin efflux carrier proteins and other transporter proteins from all domains of life. Length = 321

>gnl|CDD|223751 COG0679, COG0679, Predicted permeases [General function prediction only]

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 31/154 (20%), Positives = 68/154 (44%), Gaps = 12/154 (7%)

Query: 128 AIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVG 187
            II  ++G +     + +        LD++  L+  AA P   + +G +L + LK  G  
Sbjct: 170 LIIALILGLLLNLLGISLPA-----PLDTAVDLLASAASPLALIALGLSL-AFLKLKGSK 223

Query: 188 VSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQL 247
             +I+  ++++ +L PL+ +++ K       +G   L   +L+L  A+P A+    + + 
Sbjct: 224 PPIILIALSLKLLLAPLVALLVAK------LLGLSGLALQVLVLLSAMPTAVNAYVLARQ 277

Query: 248 FETSESECSVILLWTYAVAAFALTLWITFYIWLL 281
           +       +  +L +  ++   L L I   +  L
Sbjct: 278 YGGDPRLAASTILLSTLLSLLTLPLLILLLLRSL 311

Length = 311

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	282
KOG2722	408	consensus Predicted membrane protein [Function unk	100.0
PF03547	385	Mem_trans: Membrane transport protein; InterPro: I	99.97
TIGR00946	321	2a69 he Auxin Efflux Carrier (AEC) Family.	99.89
PRK09903	314	putative transporter YfdV; Provisional	99.89
COG0679	311	Predicted permeases [General function prediction o	99.88
TIGR00841	286	bass bile acid transporter. Functionally character	98.91
PF01758	187	SBF: Sodium Bile acid symporter family; InterPro:	98.36
TIGR00832	328	acr3 arsenical-resistance protein. The first prote	98.29
COG0385	319	Predicted Na+-dependent transporter [General funct	98.11
PF13593	313	DUF4137: SBF-like CPA transporter family (DUF4137)	97.48
COG0798	342	ACR3 Arsenite efflux pump ACR3 and related permeas	96.42
PF04172	215	LrgB: LrgB-like family ; InterPro: IPR007300 The t	87.21
COG1346	230	LrgB Putative effector of murein hydrolase [Cell e	83.07
PRK10711	231	hypothetical protein; Provisional	82.95

>KOG2722 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=2e-57  Score=422.65  Aligned_cols=263  Identities=45%  Similarity=0.729  Sum_probs=219.0

Q ss_pred             ccccccchhhHHHhHHHhhhhhhhhheeeehhcccccccccCCCCCCCcccccccCCCCccccccccccCCCcCCCCCCC
Q 023466            2 RRIQCNFSLSYELVFWPQVGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNIFLESSRKPLLHSSDRRS   81 (282)
Q Consensus         2 ~~~~~~~G~~Y~~s~~~~~g~i~~WT~~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (282)
                      ||+|.+||+.|+ +|+||+|++++|||+||++.++..+.++.-     ++..+++..|..+.++.|         +|+++
T Consensus       141 ~~~c~s~Gi~Y~-sf~~~lg~il~wty~Y~~~~~p~~~~~~~~-----~~~~Ve~~~~~~~~~s~e---------~~~~~  205 (408)
T KOG2722|consen  141 REKCASRGISYV-SFSQQLGQILRWTYVYRMLLPPNLELMSAL-----KESPVEALLESVPQPSVE---------SDEDS  205 (408)
T ss_pred             hhhhhhcchhHH-HHHHHhhhhEEEEEEeeeecCCchhhhhcC-----ChhhhhhhhhccCCCCcc---------ccccc
Confidence            799999999999 999999999999999998877643222110     011111111111100000         01111


Q ss_pred             CCcchhhhhhcccC----CCCchhhHHHHHHHhhhhhhhhhhhhchhHHHHHHHHHHHhhccchhhhhccCCchhHHHHH
Q 023466           82 PDDSQIQAETRSTK----SRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSS  157 (282)
Q Consensus        82 ~~~~~~~~~~~~~~----~~~~~~~k~~~~~~~~~~~~~lk~l~nP~iia~i~Glli~~~p~lr~l~~~~~~pl~~i~~~  157 (282)
                      +++.+   +.++++    ...+.+.|.+++.+...++.++|++++||++|+++|++++.+||+|+++|++++|+++++|+
T Consensus       206 ~~k~~---ll~~~en~~~~~~g~~~~~~~~~~~~~~~~~L~~i~~Pptia~iiA~vigai~pLr~lifg~~apl~~itds  282 (408)
T KOG2722|consen  206 TCKTL---LLASKENRNNQVVGREGKVKRRSVSLSEKVILKEIFAPPTIAAIIALVIGAIPPLRRLIFGEDAPLRVITDS  282 (408)
T ss_pred             ccccc---cccccccCCCceeeccccceEEEeehhHHhhHHHhcCchHHHHHHHHHHhcchHHHHHhhccCchHHHHHHH
Confidence            11111   111111    11247788888888888888899999999999999999999999999999999999999999


Q ss_pred             HHHhcCChhHHHHHHHHHHhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CCHHHHHHHHHhhccc
Q 023466          158 AALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIG-SDSLYQFILLLQYAVP  236 (282)
Q Consensus       158 l~~lG~~aiPl~livlG~~L~~~~~~~~~~~~~i~~~~~~RlillP~i~~~i~~~~~~~~~l~-~d~~~~~Vlll~~a~P  236 (282)
                      ++++|++++||+++++|+||.+|++++..+.|.++++++.||+++|+.+++++..++|+|+++ +||+|++|+++|+++|
T Consensus       283 v~llG~~~IP~illvLGgnL~~g~~ss~~~~~~iigiii~R~illP~~gl~iv~~A~kl~~ls~~DPlF~~VllLq~~~P  362 (408)
T KOG2722|consen  283 VTLLGDGAIPCILLVLGGNLIQGLRSSALKTSVIIGIIIGRYILLPLVGLGIVRLADKLGLLSTDDPLFQFVLLLQYASP  362 (408)
T ss_pred             HHHhccccchhhhhhhccccccCchhcccCceEEEEEEEeeeeccchhhHHHHHHHHHhCcCCCCCchhhhhhhhhhcCC
Confidence            999999999999999999999999999999999999999999999999999999999999999 9999999999999999


Q ss_pred             HHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 023466          237 PALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWITFYIWLLT  282 (282)
Q Consensus       237 ~A~~~~~ia~~~~~~~~~~s~~l~~syl~sivtlp~w~~l~l~~~~  282 (282)
                      ||+|++++||+||.+|+|||.+++|+|+++.+++++|.++|+|++.
T Consensus       363 pAi~lg~itqL~g~~e~Ecs~il~W~y~va~l~ltvw~~~f~~lv~  408 (408)
T KOG2722|consen  363 PAINLGTITQLNGVAERECSVILFWTYAVASLSLTVWSVFFLWLVV  408 (408)
T ss_pred             chhhHHHHHHHhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999999999873

>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea

Probab=99.97  E-value=1.2e-29  Score=241.49  Aligned_cols=257  Identities=27%  Similarity=0.407  Sum_probs=176.0

Q ss_pred             ccccchhhHHHhHHHhhhhhhhhheeeehhcccccccccCCCCCCCcccccc---cCCCCccccc------cc--cccCC
Q 023466            4 IQCNFSLSYELVFWPQVGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHII---SSGESSTNIF------LE--SSRKP   72 (282)
Q Consensus         4 ~~~~~G~~Y~~s~~~~~g~i~~WT~~y~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~------~~--~~~~~   72 (282)
                      .++++|++|+ +++.++++++.|++|+.+++...++.+..+....+.+...+   ++++.+.++.      .+  +++++
T Consensus       117 l~g~~~~~~~-~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (385)
T PF03547_consen  117 LFGERGVAYA-IIFDVVNNIILWSLGYFLLESRSEKEDKSEEEPSSAESIDSEQEDSDEMSLDGSSPSSTEEEIDEDGSP  195 (385)
T ss_pred             Hhcchhhhhe-hHHHHhhHHHHHHHHHHhhcccccccccccccccccccccccccCCccccCCcccccccccccccCCcc
Confidence            4788999999 99999999999999999998664332221100000000000   0000000000      00  00000


Q ss_pred             Cc-CCCCCCCCCcchhhhhhcccCCCCchhhHHHHHHHhhhhhhhhhhhhchhHHHHHHHHHHHhhccchhhhhccCCch
Q 023466           73 LL-HSSDRRSPDDSQIQAETRSTKSRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPL  151 (282)
Q Consensus        73 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~lk~l~nP~iia~i~Glli~~~p~lr~l~~~~~~pl  151 (282)
                      .. +++..++ ..++. ...++.+.+...+.+.++..++...+..+|.++||+++|+++|++++++|+.+++++.     
T Consensus       196 ~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nP~~~a~~lgli~~~~~~~~~~~~~-----  268 (385)
T PF03547_consen  196 SSTPSQSSAS-APSSV-STSPSPSNSTGAEQKSSNSTRKKLKKSILKLFKNPPLIAIILGLIIGLIPPLRPLFFP-----  268 (385)
T ss_pred             cccccccccc-cchhh-ccCCcccccchhhhhhhhhHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcccchH-----
Confidence            00 0000000 00000 0000011111233333333333323333588899999999999999999988876555     


Q ss_pred             hHHHHHHHHhcCChhHHHHHHHHHHhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHH
Q 023466          152 RVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLL  231 (282)
Q Consensus       152 ~~i~~~l~~lG~~aiPl~livlG~~L~~~~~~~~~~~~~i~~~~~~RlillP~i~~~i~~~~~~~~~l~~d~~~~~Vlll  231 (282)
                      .++.++++++|++++|++|+++|++|++..++...+.+.....++.|++++|+++++++++      ++.|+....++++
T Consensus       269 ~~i~~~~~~lg~~~~pl~l~~lG~~l~~~~~~~~~~~~~~~~~~~~rlii~P~i~~~~~~~------~~l~~~~~~~~~~  342 (385)
T PF03547_consen  269 SFITDSLSYLGAAAVPLALFVLGASLARGPRKSALGWKPSIIAVLVRLIILPLIGIGIVFL------LGLDGDMARVLIL  342 (385)
T ss_pred             hHHHHHHHHHHhhhHHHHHHHHHHHHhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHH------HCCCHHHHHHHHH
Confidence            6899999999999999999999999998666656677777778999999999999999987      4567788999999


Q ss_pred             hhcccHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHH
Q 023466          232 QYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWI  274 (282)
Q Consensus       232 ~~a~P~A~~~~~ia~~~~~~~~~~s~~l~~syl~sivtlp~w~  274 (282)
                      ++++|+|++..++|++||.+++++|..++|||+++++|+|+|+
T Consensus       343 ~~~~P~a~~~~~~a~~~~~~~~~~s~~~~~~~~~~~~~~~~~~  385 (385)
T PF03547_consen  343 QAAMPTAINSFVIASLYGLDEEEASSIVFWSTLLSIPTLPLWI  385 (385)
T ss_pred             hccCCchHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence            9999999999999999999999999999999999999999995

Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane

>TIGR00946 2a69 he Auxin Efflux Carrier (AEC) Family

Probab=99.89  E-value=2.7e-22  Score=187.81  Aligned_cols=142  Identities=19%  Similarity=0.313  Sum_probs=126.5

Q ss_pred             hhhhchhHHHHHHHHHHHhhccchhhhhccCCch-hHHHHHHHHhcCChhHHHHHHHHHHhccccccCCCChhHHHHHHH
Q 023466          118 KMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPL-RVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIA  196 (282)
Q Consensus       118 k~l~nP~iia~i~Glli~~~p~lr~l~~~~~~pl-~~i~~~l~~lG~~aiPl~livlG~~L~~~~~~~~~~~~~i~~~~~  196 (282)
                      |.+.||+++|.++|+++..++          .++ .++.++++++|++++|++|+++|..+..  ++.+.+.+.++..++
T Consensus       178 ~~~~nP~iia~i~Gl~~~~~~----------i~lP~~l~~~l~~lg~~~~plaLl~lG~~l~~--~~~~~~~~~~~~~~~  245 (321)
T TIGR00946       178 KLIKFPPLWAPLLSVILSLVG----------FKMPGLILKSISILSGATTPMALFSLGLALSP--RKIKLGVRDAILALI  245 (321)
T ss_pred             HHHhCCChHHHHHHHHHHHHh----------hcCcHHHHHHHHHHHHHHHHHHHHHHHHhhCh--hhhccChHHHHHHHH
Confidence            445799999999999999986          344 8999999999999999999999999975  223334577889999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhhcccHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 023466          197 IRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWITF  276 (282)
Q Consensus       197 ~RlillP~i~~~i~~~~~~~~~l~~d~~~~~Vlll~~a~P~A~~~~~ia~~~~~~~~~~s~~l~~syl~sivtlp~w~~l  276 (282)
                      +|+++.|++++++...      ++.|+....++++++|||+|.+..++|++||.|+++++..+++||++|++|+|+|+.+
T Consensus       246 ~klil~P~i~~~~~~~------~~l~~~~~~~~vl~aa~P~a~~~~i~A~~y~~~~~~aa~~v~~sT~ls~~tlp~~~~l  319 (321)
T TIGR00946       246 VRFLVQPAVMAGISKL------IGLRGLELSVAILQAALPGGAVAAVLATEYEVDVELASTAVTLSTVLSLISLPLFIIL  319 (321)
T ss_pred             HHHHHHHHHHHHHHHH------hCCChHHHHHHHHHHcCChhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999888765      5678889999999999999999999999999999999999999999999999999876


Q ss_pred             H
Q 023466          277 Y  277 (282)
Q Consensus       277 ~  277 (282)
                      +
T Consensus       320 ~  320 (321)
T TIGR00946       320 L  320 (321)
T ss_pred             h
Confidence            3

>PRK09903 putative transporter YfdV; Provisional

Probab=99.89  E-value=4e-22  Score=186.49  Aligned_cols=141  Identities=18%  Similarity=0.183  Sum_probs=124.5

Q ss_pred             hhhhchhHHHHHHHHHHHhhccchhhhhccCCch-hHHHHHHHHhcCChhHHHHHHHHHHhccccccCCCChhHHHHHHH
Q 023466          118 KMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPL-RVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIA  196 (282)
Q Consensus       118 k~l~nP~iia~i~Glli~~~p~lr~l~~~~~~pl-~~i~~~l~~lG~~aiPl~livlG~~L~~~~~~~~~~~~~i~~~~~  196 (282)
                      +.+.||+++|.++|+++.+.+          .++ .++.++++++|++++|++|+++|++|++...  +. ++..+..++
T Consensus       169 ~~~~nP~iia~~~gl~~~l~~----------i~lP~~i~~~l~~lg~~~~PlaL~~iG~~L~~~~~--~~-~~~~~~~~~  235 (314)
T PRK09903        169 SAAKEPVVWAPVLATILVLVG----------VKIPAAWDPTFNLIAKANSGVAVFAAGLTLAAHKF--EF-SAEIAYNTF  235 (314)
T ss_pred             HHHhchHHHHHHHHHHHHHcC----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--cc-cHHHHHHHH
Confidence            446799999999999998875          455 8999999999999999999999999997432  22 356778899


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhhcccHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 023466          197 IRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWITF  276 (282)
Q Consensus       197 ~RlillP~i~~~i~~~~~~~~~l~~d~~~~~Vlll~~a~P~A~~~~~ia~~~~~~~~~~s~~l~~syl~sivtlp~w~~l  276 (282)
                      .|+++.|++++++...      ++.|+....++++++|||+|++..++|++||.|++.++..++.||++|++|+|+|+.+
T Consensus       236 ~Kli~~P~i~~~~~~~------~~l~~~~~~v~vl~aa~P~a~~~~i~A~~y~~~~~~aa~~v~~sTlls~iTlpl~~~l  309 (314)
T PRK09903        236 LKLILMPLALLLVGMA------CHLNSEHLQMMVLAGALPPAFSGIIIASRFNVYTRTGTASLAVSVLGFVVTAPLWIYV  309 (314)
T ss_pred             HHHHHHHHHHHHHHHH------cCCCcHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999777664      4668889999999999999999999999999999999999999999999999999986


Q ss_pred             H
Q 023466          277 Y  277 (282)
Q Consensus       277 ~  277 (282)
                      +
T Consensus       310 ~  310 (314)
T PRK09903        310 S  310 (314)
T ss_pred             H
Confidence            4

>COG0679 Predicted permeases [General function prediction only]

Probab=99.88  E-value=6.7e-22  Score=185.13  Aligned_cols=191  Identities=20%  Similarity=0.363  Sum_probs=160.2

Q ss_pred             cccccchhhHHHhHHHhhhhhhhhheeeehhcccccccccCCCCCCCcccccccCCCCccccccccccCCCcCCCCCCCC
Q 023466            3 RIQCNFSLSYELVFWPQVGAIYIWTYVYYVMSLYLNKSVSDAGTNKDSRIHIISSGESSTNIFLESSRKPLLHSSDRRSP   82 (282)
Q Consensus         3 ~~~~~~G~~Y~~s~~~~~g~i~~WT~~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (282)
                      +.-|++|++|+ +++++++++..|++|+.++...++        +                                   
T Consensus       118 ~~~G~~gl~~~-~i~~~~~~~~~~~~g~~~l~~~~~--------~-----------------------------------  153 (311)
T COG0679         118 SLFGEKGLAYA-VIFLIIGLFLMFTLGVILLARSGG--------G-----------------------------------  153 (311)
T ss_pred             HHcCcchHHHH-HHHHHHHHHHHHHHHHHHHHHhcC--------C-----------------------------------
Confidence            34589999999 999999999999999998774421        0                                   


Q ss_pred             CcchhhhhhcccCCCCchhhHHHHHHHhhhhhhhhhhhhchhHHHHHHHHHHHhhccchhhhhccCCch-hHHHHHHHHh
Q 023466           83 DDSQIQAETRSTKSRFPFLDKMRQRINKFTEKIDLKMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPL-RVLDSSAALV  161 (282)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~lk~l~nP~iia~i~Glli~~~p~lr~l~~~~~~pl-~~i~~~l~~l  161 (282)
                       ++.                   ...+..+     +.+.||+++|.++|+++...+          .++ .++.++++++
T Consensus       154 -~~~-------------------~~~~~~~-----~~~~nP~i~a~i~g~~~~~~~----------i~lP~~~~~~~~~l  198 (311)
T COG0679         154 -TNK-------------------SLLSVLK-----KLLTNPLIIALILGLLLNLLG----------ISLPAPLDTAVDLL  198 (311)
T ss_pred             -chh-------------------HHHHHHH-----HHHhCcHHHHHHHHHHHHHcC----------CCCcHHHHHHHHHH
Confidence             000                   0001222     556899999999999999876          334 7999999999


Q ss_pred             cCChhHHHHHHHHHHhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhhcccHHHHH
Q 023466          162 GEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAV  241 (282)
Q Consensus       162 G~~aiPl~livlG~~L~~~~~~~~~~~~~i~~~~~~RlillP~i~~~i~~~~~~~~~l~~d~~~~~Vlll~~a~P~A~~~  241 (282)
                      |++++|++|+++|.+|+. .+.++.+.+.++.....|+++.|++++++.++      ++.++....++++++|||+|.|.
T Consensus       199 ~~a~~pl~li~lG~~L~~-~~~~~~~~~~~~~~~~~kll~~Pl~~~~~~~~------~~l~~~~~~v~vl~~a~P~A~~~  271 (311)
T COG0679         199 ASAASPLALIALGLSLAF-LKLKGSKPPIILIALSLKLLLAPLVALLVAKL------LGLSGLALQVLVLLSAMPTAVNA  271 (311)
T ss_pred             HHhhhhHHHHHHhhhcch-hhhccccchhHHHHHHHHHHHHHHHHHHHHHH------cCCChHHHHHHHHHhhCcHHhHH
Confidence            999999999999999998 44555666777777777999999999998876      56677788999999999999999


Q ss_pred             HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023466          242 GTIIQLFETSESECSVILLWTYAVAAFALTLWITFYIW  279 (282)
Q Consensus       242 ~~ia~~~~~~~~~~s~~l~~syl~sivtlp~w~~l~l~  279 (282)
                      .++|++||.|++.++..++.||++|++|+|.|..++.+
T Consensus       272 ~v~a~~~~~~~~laa~~i~ist~ls~~t~p~~~~~l~~  309 (311)
T COG0679         272 YVLARQYGGDPRLAASTILLSTLLSLLTLPLLILLLLR  309 (311)
T ss_pred             HHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999888765

>TIGR00841 bass bile acid transporter

Probab=98.91  E-value=6.6e-09  Score=96.47  Aligned_cols=108  Identities=13%  Similarity=0.084  Sum_probs=93.0

Q ss_pred             hHHHHHHHHHHhccccccC-CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhhcccHHHHHHHH
Q 023466          166 IPAMTLVIGANLLSGLKRS-GVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTI  244 (282)
Q Consensus       166 iPl~livlG~~L~~~~~~~-~~~~~~i~~~~~~RlillP~i~~~i~~~~~~~~~l~~d~~~~~Vlll~~a~P~A~~~~~i  244 (282)
                      ..++|+.+|.++.....++ ..+++......+.|++++|++++++.++      ++.|+.....+++.+++|+|.+..++
T Consensus        14 l~~~m~~~G~~l~~~~~~~~~~~p~~~~~~~~~~~vi~Plla~~l~~~------~~l~~~~~~glvL~~~~P~~~~s~v~   87 (286)
T TIGR00841        14 LFLIMFSMGCTLEFEDFKGHLRKPWGVIIGLLAQYGIMPLTGFLLAKV------FKLPPELAVGVLIVGCCPGGTASNVF   87 (286)
T ss_pred             HHHHHHHccCCCcHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHH------hCCCHHHHHHHHheeeCCCchHHHHH
Confidence            6678899999988533222 2234667788888999999999888875      57789999999999999999999999


Q ss_pred             HHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023466          245 IQLFETSESECSVILLWTYAVAAFALTLWITFYIW  279 (282)
Q Consensus       245 a~~~~~~~~~~s~~l~~syl~sivtlp~w~~l~l~  279 (282)
                      ++++|.|.+.++.+...+++++++++|+|+.++..
T Consensus        88 t~~~~gn~~la~~~~~~stlls~vt~Pl~l~~~~~  122 (286)
T TIGR00841        88 TYLLKGDMALSISMTTCSTLLALGMMPLLLYIYAK  122 (286)
T ss_pred             HHHhCCCHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999998865

Functionally characterized members of the BASS family catalyze Na+:bile acid symport. These systems have been identified in intestinal, liver and kidney tissues of animals. These symporters exhibit broad specificity, taking up a variety of non bile organic compounds as well as taurocholate and other bile salts. Functionally uncharacterised homologues are found in plants, yeast, archaea and bacteria.

>PF01758 SBF: Sodium Bile acid symporter family; InterPro: IPR002657 This family of proteins are found both in prokaryotes and eukaryotes

Probab=98.36  E-value=4.9e-06  Score=72.39  Aligned_cols=109  Identities=17%  Similarity=0.164  Sum_probs=83.4

Q ss_pred             hHHHHHHHHHHhcccc-ccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhhcccHHHHHHHH
Q 023466          166 IPAMTLVIGANLLSGL-KRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTI  244 (282)
Q Consensus       166 iPl~livlG~~L~~~~-~~~~~~~~~i~~~~~~RlillP~i~~~i~~~~~~~~~l~~d~~~~~Vlll~~a~P~A~~~~~i  244 (282)
                      +-++|+.+|.++.-.. ++...++|.+....+..++++|++++++.+.+     ++++|.+..-+++.+++|.|.....+
T Consensus         4 l~~~mf~~gl~~~~~~l~~~~~~p~~l~~~l~~~~~i~Plla~~l~~~~-----~~~~~~~~~Gl~l~~~~P~~~~s~~~   78 (187)
T PF01758_consen    4 LFLMMFSMGLSLTFEDLRRVLRRPKLLLIGLLAQFLIMPLLAFGLAWLL-----LPLSPALALGLLLVAACPGGPASNVF   78 (187)
T ss_dssp             HHHHHHHHHHC--GGGGHHHHHSHHHHHHHHHHHHHHHHHHHHHHH-HH-----TT--HHHHHHHHHHHHS-B-THHHHH
T ss_pred             hhHHHHHhhhcccHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCHHHHHHHHHHhcCCcHHHHHHH
Confidence            4467778888876422 22223467778889999999999999998433     68899999999999999999999999


Q ss_pred             HHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023466          245 IQLFETSESECSVILLWTYAVAAFALTLWITFYIW  279 (282)
Q Consensus       245 a~~~~~~~~~~s~~l~~syl~sivtlp~w~~l~l~  279 (282)
                      +.+.|+|.+....+..++++.+++++|++..++..
T Consensus        79 t~l~~Gd~~ls~~lt~istll~~~~~P~~~~l~~~  113 (187)
T PF01758_consen   79 TYLAGGDVALSVSLTLISTLLAPFLMPLLLYLLSG  113 (187)
T ss_dssp             HHHTT--HHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHhCCCcccccceeeHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999988753

They are related to the human bile acid:sodium symporters, which are transmembrane proteins functioning in the liver in the uptake of bile acids from portal blood plasma, a process mediated by the co-transport of Na+ []. In yeast, overexpression of the ACR3 gene confers an arsenite- but not an arsenate-resistance phenotype [].; GO: 0008508 bile acid:sodium symporter activity, 0006814 sodium ion transport, 0016020 membrane; PDB: 3ZUX_A 3ZUY_A.

>TIGR00832 acr3 arsenical-resistance protein

Probab=98.29  E-value=2.8e-05  Score=73.72  Aligned_cols=141  Identities=16%  Similarity=0.046  Sum_probs=105.3

Q ss_pred             hhHHHHHHHHHHHhhccchhhhhccCCchhHHHHHHHHhcCChhH------HHHHHHHHHhccc-cccCCCChhHHHHHH
Q 023466          123 PSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIP------AMTLVIGANLLSG-LKRSGVGVSLIMGII  195 (282)
Q Consensus       123 P~iia~i~Glli~~~p~lr~l~~~~~~pl~~i~~~l~~lG~~aiP------l~livlG~~L~~~-~~~~~~~~~~i~~~~  195 (282)
                      ..+.++++|++++..-|         ....+....  .+.+...|      .+|+.+|.++.-. .++...++|.+....
T Consensus        11 ~~~~~~i~~~~~g~~~P---------~~~~~~~~~--~~~~~~~~~~~~l~~mmf~mgl~L~~~df~~~~~~pk~~~~~~   79 (328)
T TIGR00832        11 WIFLAIAAGVGLGVLFP---------SVFQALAAL--EVATVSIPIAIGLILMMYPPLAKVDYSALGDVFKDPKGLILSL   79 (328)
T ss_pred             HHHHHHHHHHHHHHhcc---------ccHHHHHHH--HhhhhHHHHHHHHHHHHHHhhhcCCHHHHHHHHcCchHHHHHH
Confidence            44677778888887643         111222211  22345556      3566666777532 233334567788889


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhhcccHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 023466          196 AIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWIT  275 (282)
Q Consensus       196 ~~RlillP~i~~~i~~~~~~~~~l~~d~~~~~Vlll~~a~P~A~~~~~ia~~~~~~~~~~s~~l~~syl~sivtlp~w~~  275 (282)
                      +.-++++|++++++.+.+     ++.+|.+..=+++.+++|.+.....++.+.++|...+..+...++++++++.|.+..
T Consensus        80 ~~qfvi~Plla~~l~~l~-----~~~~p~l~~GliLv~~~Pgg~~S~v~T~lAkGnvalsv~lt~~stLl~~~~~P~l~~  154 (328)
T TIGR00832        80 FINWIIGPFLMFLLAWLF-----LRDLFEYIAGLILLGLARCIAMVFVWNQLAKGDPEYTLVLVAVNSLFQVFLYAPLAW  154 (328)
T ss_pred             HHHHHHHHHHHHHHHHHH-----cCCCHHHHHHHHHHHhcchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998863     477788999999999999999999999999999988888888999999999999988


Q ss_pred             HHHH
Q 023466          276 FYIW  279 (282)
Q Consensus       276 l~l~  279 (282)
                      +|..
T Consensus       155 ll~~  158 (328)
T TIGR00832       155 LLLG  158 (328)
T ss_pred             HHHh
Confidence            7754

The first protein of the ACR3 family functionally characterized was the ACR3 protein of Saccharomyces cerevisiae. It is present in the yeast plasma membrane and pumps arsenite out of the cell in response to the pmf. Similar proteins are found in bacteria, often as part of a four gene operon with an regulatory protein ArsR, a protein of unknown function ArsH, and an arsenate reductase that converts arsenate to arsenite to facilitate transport.

>COG0385 Predicted Na+-dependent transporter [General function prediction only]

Probab=98.11  E-value=6.2e-05  Score=70.95  Aligned_cols=110  Identities=16%  Similarity=0.156  Sum_probs=90.4

Q ss_pred             ChhHHHHHHHHHHhcccc-ccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhhcccHHHHHH
Q 023466          164 AAIPAMTLVIGANLLSGL-KRSGVGVSLIMGIIAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVG  242 (282)
Q Consensus       164 ~aiPl~livlG~~L~~~~-~~~~~~~~~i~~~~~~RlillP~i~~~i~~~~~~~~~l~~d~~~~~Vlll~~a~P~A~~~~  242 (282)
                      ...-++|+..|..|.... +..-.++|....+.+.-++++|++++++.+.      ++.||....=+++..++|.++..-
T Consensus        42 ~~l~lImf~mGl~Ls~~d~~~~~~~p~~vligl~~qfvlmPlla~~~~~~------~~l~~~l~~Gl~ll~~~Pggv~S~  115 (319)
T COG0385          42 IALALIMFGMGLTLSREDFLAGLKHPRLVLIGLAAQFVLMPLLALLLAKL------FPLPPELAVGLLLLGCCPGGVASN  115 (319)
T ss_pred             HHHHHHHHhcCCCCCHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHhHHheeeCCCchhHH
Confidence            345566777777776422 2333456778888999999999999999986      567888888888999999999999


Q ss_pred             HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023466          243 TIIQLFETSESECSVILLWTYAVAAFALTLWITFYIW  279 (282)
Q Consensus       243 ~ia~~~~~~~~~~s~~l~~syl~sivtlp~w~~l~l~  279 (282)
                      .++.++++|...+-.....|++++++..|+++.+|+.
T Consensus       116 ~~t~lAkGnValsV~~tsvStll~~f~tPllv~l~~~  152 (319)
T COG0385         116 AMTYLAKGNVALSVCSTSVSTLLGPFLTPLLVGLLAG  152 (319)
T ss_pred             HHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999998888888889999999999999998763

>PF13593 DUF4137: SBF-like CPA transporter family (DUF4137)

Probab=97.48  E-value=0.00084  Score=63.31  Aligned_cols=144  Identities=15%  Similarity=0.188  Sum_probs=101.9

Q ss_pred             hhHHHHHHHHHHHhhccchhhhhccCCchhHHHHHHHHhcCChhHHHHHHHHHHhcccc-ccCCCChhHHHHHHHHHHHH
Q 023466          123 PSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGL-KRSGVGVSLIMGIIAIRYIL  201 (282)
Q Consensus       123 P~iia~i~Glli~~~p~lr~l~~~~~~pl~~i~~~l~~lG~~aiPl~livlG~~L~~~~-~~~~~~~~~i~~~~~~Rlil  201 (282)
                      +-+++.+++++++..-|-.      +....++..  +......+.+..++-|.+|.... +....++|....+...-+++
T Consensus         2 ~fl~~l~~ai~la~~~P~~------g~~~~~~~~--~~~~~~~v~~iFf~~Gl~L~~~~l~~~~~~~~~~l~~~~~~fvl   73 (313)
T PF13593_consen    2 WFLLGLLLAILLAYLFPAP------GAAGGVIKP--EYVIKYGVALIFFISGLSLPTEELKAALRNWRLHLFVQAFNFVL   73 (313)
T ss_pred             chHHHHHHHHHHHHHcCcc------cccCCccch--hhhHHHHHHHHHHHHcCCCCHHHHHHHHhcchHHHHHHHHHHHH
Confidence            3466777777776653311      111112210  23334458888889998887532 22233456777788889999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhhcccHHHHH-HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023466          202 LPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAV-GTIIQLFETSESECSVILLWTYAVAAFALTLWITFYI  278 (282)
Q Consensus       202 lP~i~~~i~~~~~~~~~l~~d~~~~~Vlll~~a~P~A~~~-~~ia~~~~~~~~~~s~~l~~syl~sivtlp~w~~l~l  278 (282)
                      .|++++++......  +  .++.+..=+++..++|+.+.. ..++++.|+|+..+-.....+.++.++..|+|+.+++
T Consensus        74 ~Pll~~~~~~l~~~--~--~~~~l~~Gl~~~~~lPtTv~S~v~~T~~AgGN~a~Al~~~~~snllgv~ltP~ll~l~l  147 (313)
T PF13593_consen   74 FPLLGFGLSRLFPA--F--LPPELALGLLILACLPTTVSSSVVLTRLAGGNVALALFNAVLSNLLGVFLTPLLLLLLL  147 (313)
T ss_pred             HHHHHHHHHHHhhc--c--CCHHHHHHHHHHhhCCchhhHHHHHHHHcCCCHHHHHHHHHHHhhhhHhHHHHHHHHHh
Confidence            99999999886321  1  356688888999999999776 5799999999877777777999999999999999887

>COG0798 ACR3 Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism]

Probab=96.42  E-value=0.13  Score=49.07  Aligned_cols=139  Identities=17%  Similarity=0.133  Sum_probs=107.4

Q ss_pred             hHHHHHHHHHHHhhccchhhhhccCCchhHHHHHHH--HhcCChhHHHHHHHHHH---hcccc----ccCCCChhHHHHH
Q 023466          124 STIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAA--LVGEAAIPAMTLVIGAN---LLSGL----KRSGVGVSLIMGI  194 (282)
Q Consensus       124 ~iia~i~Glli~~~p~lr~l~~~~~~pl~~i~~~l~--~lG~~aiPl~livlG~~---L~~~~----~~~~~~~~~i~~~  194 (282)
                      ..+++++|+.++..-|             -+.+.+.  ..++..+|.+..++=+.   +.+.+    +.-.-+.|-....
T Consensus        20 v~l~i~~Gi~lG~~~p-------------~~~~~l~~~~~~~~sipiai~L~~MmYP~m~ki~~~~~~~v~k~~k~L~ls   86 (342)
T COG0798          20 VFLAIAIGILLGVHFP-------------GLAQLLGKLEFGGVSIPIAIGLILMMYPPMLKIDFEELKNVFKDPKPLILS   86 (342)
T ss_pred             HHHHHHHHHHHHhccc-------------chhhhcccceeCceehhHHHHHHHHHhHHHhcCCHHHHHHHHhcchHHHHH
Confidence            4788889998887632             1344444  57788888776544322   22221    1112235778888


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhhcccHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHH
Q 023466          195 IAIRYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWI  274 (282)
Q Consensus       195 ~~~RlillP~i~~~i~~~~~~~~~l~~d~~~~~Vlll~~a~P~A~~~~~ia~~~~~~~~~~s~~l~~syl~sivtlp~w~  274 (282)
                      .+.-.++-|++++.+.+++     +++.|.+..=+++....|.-...-..+++-++|++.++..+.+.-++.++..|.+.
T Consensus        87 L~~Nwii~P~lm~~la~~f-----l~~~pey~~GlILlglApC~aMVivw~~La~Gd~~~tlv~Va~n~l~qiv~y~~~~  161 (342)
T COG0798          87 LFVNWIIGPLLMFALAWFF-----LPDEPEYRAGLILLGLAPCIAMVIVWSGLAKGDRELTLVLVAFNSLLQIVLYAPLG  161 (342)
T ss_pred             HHHHHHHHHHHHHHHHHHH-----hCCCHHHHHHHHHHHhhhhHHHHHHHHhhccCcHhhhhHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999875     68888888888888899999999999999999999999999999999999999999


Q ss_pred             HHHHHH
Q 023466          275 TFYIWL  280 (282)
Q Consensus       275 ~l~l~~  280 (282)
                      .+|+..
T Consensus       162 ~~~l~v  167 (342)
T COG0798         162 KFFLGV  167 (342)
T ss_pred             HHHHhh
Confidence            888764

>PF04172 LrgB: LrgB-like family ; InterPro: IPR007300 The two products of the lrgAB operon are potential membrane proteins, and LrgA and LrgB are both thought to control murein hydrolase activity and penicillin tolerance []

Probab=87.21  E-value=22  Score=31.96  Aligned_cols=138  Identities=13%  Similarity=0.105  Sum_probs=77.8

Q ss_pred             hhhhchhHHHHHHHHHHHhhccchhhhhccCCchhHHHHHHHHhcCChhHHHHHHHHHHhccccccCCCChhHHHHHHHH
Q 023466          118 KMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAI  197 (282)
Q Consensus       118 k~l~nP~iia~i~Glli~~~p~lr~l~~~~~~pl~~i~~~l~~lG~~aiPl~livlG~~L~~~~~~~~~~~~~i~~~~~~  197 (282)
                      +.++||.+++.++=+++-..-         +.|.+--.+.-+.+...--|. .+.+|--|++-.+.-+.+.+.+...++.
T Consensus        17 ~~~l~P~l~a~~~ii~~L~~~---------~i~y~~Y~~gg~~l~~lLgPa-tVALAvPLY~~~~~l~~~~~~il~~~~~   86 (215)
T PF04172_consen   17 SPFLNPLLIAIVLIIAFLLLT---------GIPYEDYMQGGDILSFLLGPA-TVALAVPLYRQRRLLKKNWIPILVGVLV   86 (215)
T ss_pred             CCcccHHHHHHHHHHHHHHHH---------CCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            446799999887755554432         356654455555554444444 6688888886221111222334444433


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhh-cccHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHH
Q 023466          198 RYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQY-AVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWI  274 (282)
Q Consensus       198 RlillP~i~~~i~~~~~~~~~l~~d~~~~~Vlll~~-a~P~A~~~~~ia~~~~~~~~~~s~~l~~syl~sivtlp~w~  274 (282)
                      =-++--.....+.+.      ++.|+.....+.--+ .+|-|+.   +++..|.+++..+..+..|=++-.+-=|.++
T Consensus        87 g~~~~~~~~~~l~~~------lgl~~~~~~Sl~pkSVTtpiAi~---is~~iGG~~sLta~~VvitGi~Ga~~g~~ll  155 (215)
T PF04172_consen   87 GSLVSIFSAVLLARL------LGLSPEIILSLAPKSVTTPIAIE---ISEQIGGIPSLTAVFVVITGILGAVLGPPLL  155 (215)
T ss_pred             HHHHHHHHHHHHHHH------HCcCHHHHHHHHHHHhhHHHHHH---HHHHhCChHHHHHHHHHHHhhHHHHhHHHHH
Confidence            333333333333333      454554444444443 3666665   4688889888888888877666665555443

>COG1346 LrgB Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane]

Probab=83.07  E-value=32  Score=31.26  Aligned_cols=138  Identities=12%  Similarity=0.114  Sum_probs=74.0

Q ss_pred             hhhchhHHHHHHHHHHHhhccchhhhhccCCchhHHHHHHHHhcCChhHHHHHHHHHHhccccccCCCChhHHHHHHHHH
Q 023466          119 MIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAIR  198 (282)
Q Consensus       119 ~l~nP~iia~i~Glli~~~p~lr~l~~~~~~pl~~i~~~l~~lG~~aiPl~livlG~~L~~~~~~~~~~~~~i~~~~~~R  198 (282)
                      .++||.+++.++.+.+-..-         +.|.+-=.+.-+.+-..=-| +.+.++-=|++-.+.-+.+++.+...+++=
T Consensus        31 ~~l~PlLv~~~~li~~L~~~---------~i~Y~~Y~~g~~~i~~lLgP-AtVAlAvPLYkq~~~ik~~w~~I~~g~~vG  100 (230)
T COG1346          31 PFLNPLLVATVLLIAFLLLF---------GISYEDYMKGGQWINFLLGP-ATVALAVPLYKQRHLIKRHWKPILAGVLVG  100 (230)
T ss_pred             cccchHHHHHHHHHHHHHHc---------CCCHHHHhcccHHHHHHHHH-HHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46799999988877765542         24443222222333333334 555677777762222222233444444433


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhhc-ccHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 023466          199 YILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYA-VPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWIT  275 (282)
Q Consensus       199 lillP~i~~~i~~~~~~~~~l~~d~~~~~Vlll~~a-~P~A~~~~~ia~~~~~~~~~~s~~l~~syl~sivtlp~w~~  275 (282)
                      -++-=..++.+.++      ++.|+.....++=.+. +|.|+-   +++..|.-++..+..+..+=++-.+.-|...-
T Consensus       101 s~~ai~s~~llak~------~g~~~~~~~Sl~PkSvTTpiAm~---vs~~iGGip~ltav~Vi~tGi~Gavlg~~llk  169 (230)
T COG1346         101 SVVAIISGVLLAKL------FGLSPELILSLLPKSVTTPIAME---VSESIGGIPALTAVFVILTGILGAVLGPLLLK  169 (230)
T ss_pred             HHHHHHHHHHHHHH------hCCCHHHHHHhcccccccHHHHH---HHHhcCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            33332333333332      4556655555554443 566654   46778877778888877777766665555443

>PRK10711 hypothetical protein; Provisional

Probab=82.95  E-value=37  Score=30.91  Aligned_cols=138  Identities=13%  Similarity=0.138  Sum_probs=80.5

Q ss_pred             hhhhchhHHHHHHHHHHHhhccchhhhhccCCchhHHHHHHHHhcCChhHHHHHHHHHHhccccccCCCChhHHHHHHHH
Q 023466          118 KMIFAPSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRSGVGVSLIMGIIAI  197 (282)
Q Consensus       118 k~l~nP~iia~i~Glli~~~p~lr~l~~~~~~pl~~i~~~l~~lG~~aiPl~livlG~~L~~~~~~~~~~~~~i~~~~~~  197 (282)
                      ..++||.+++.++-+++-..-         +.|.+--.+.-+.+...--|. ++.++--|++-.+.-+.+.+.+...+++
T Consensus        28 ~~~l~Pll~s~~~ii~~L~~~---------~i~Y~~Y~~g~~~l~~lLgPA-tVALAvPLY~q~~~lk~~~~~I~~~~~v   97 (231)
T PRK10711         28 FPLLNPLLVAMVVIIPFLLLT---------GIPYEHYFKGSEVLNDLLQPA-VVALAFPLYEQLHQIRARWKSIISICFI   97 (231)
T ss_pred             CCcccHHHHHHHHHHHHHHHh---------CCCHHHHHhccHHHHhhhhHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence            446799999987666665442         356544444545554444443 3477777776222212223444444444


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhhc-ccHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHH
Q 023466          198 RYILLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYA-VPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWI  274 (282)
Q Consensus       198 RlillP~i~~~i~~~~~~~~~l~~d~~~~~Vlll~~a-~P~A~~~~~ia~~~~~~~~~~s~~l~~syl~sivtlp~w~  274 (282)
                      =-++--...+.+.+.      ++.|+.....++-.+. +|-|+.   +++..|..++..+..+..|=++-.+--|.+.
T Consensus        98 G~~v~i~s~~~l~~~------lg~~~~~~~Sl~pkSVTtPIAm~---is~~iGG~~sLta~~ViitGi~Ga~~g~~ll  166 (231)
T PRK10711         98 GSVVAMVTGTAVALW------MGATPEIAASILPKSVTTPIAMA---VGGSIGGIPAISAVCVIFVGILGAVFGHTLL  166 (231)
T ss_pred             HHHHHHHHHHHHHHH------HCcCHHHHHHHhhhhhhHHHHHH---HHHHhCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444444444444443      5556666666555554 677776   4588999998888888877666666555443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	282
3zux_A	332	Transporter, ASBTNM; transport protein, membrane p	99.0

>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A*

Probab=99.00  E-value=2.7e-09  Score=99.72  Aligned_cols=138  Identities=7%  Similarity=-0.015  Sum_probs=108.6

Q ss_pred             chhHHHHHHHHHHHhhccchhhhhccCCchhHHHHHHHHhcCChhHHHHHHHHHHhccccccC-CCChhHHHHHHHHHHH
Q 023466          122 APSTIAAIIGFVIGTISPFRKVIVGESAPLRVLDSSAALVGEAAIPAMTLVIGANLLSGLKRS-GVGVSLIMGIIAIRYI  200 (282)
Q Consensus       122 nP~iia~i~Glli~~~p~lr~l~~~~~~pl~~i~~~l~~lG~~aiPl~livlG~~L~~~~~~~-~~~~~~i~~~~~~Rli  200 (282)
                      ++-.+.+++|.+++..-|-         ....+    +..-..++.++|+..|.++....-+. ..++|......+.+++
T Consensus        18 ~~~~l~i~~~~~lg~~~P~---------~~~~~----~~~i~~~l~~~mf~~G~~l~~~~l~~~~~~~~~~~~~l~~~~v   84 (332)
T 3zux_A           18 KTFSLWAALFAAAAFFAPD---------TFKWA----GPYIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFA   84 (332)
T ss_dssp             HTHHHHHHHHHHHHHHCGG---------GTGGG----GGGHHHHHHHHHHHHHHHCCGGGGHHHHHSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcch---------hhhhh----HHHHHHHHHHHHHHHHhCCCHHHHHHHHhCcHHHHHHHHHHHH
Confidence            3557777777777776331         11111    12223578899999999998533221 1245667778899999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhhcccHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023466          201 LLPLLGIVIVKAAYRFGFIGSDSLYQFILLLQYAVPPALAVGTIIQLFETSESECSVILLWTYAVAAFALTLWITFYI  278 (282)
Q Consensus       201 llP~i~~~i~~~~~~~~~l~~d~~~~~Vlll~~a~P~A~~~~~ia~~~~~~~~~~s~~l~~syl~sivtlp~w~~l~l  278 (282)
                      ++|++++++.++      ++.||.+...+++..++|++....+++.++|.|.+.+......+++++++++|+|..++.
T Consensus        85 i~Pll~~~l~~~------~~l~~~~~~Glil~~~~P~~~~s~v~t~~a~Gd~~la~~~~~~stll~~~~~Pl~~~l~~  156 (332)
T 3zux_A           85 IMPATAWCLSKL------LNLPAEIAVGVILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLA  156 (332)
T ss_dssp             HHHHHHHHHHHH------TTCCHHHHHHHHHHHHSCCCTHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH------hCCChHHHHHHHHHhcCCchhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            999999998875      578999999999999999999999999999999999999999999999999999998875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00