Citrus Sinensis ID: 023468

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280--
Protein Sequence
MENPIPQKKEKKKNFRKRSYEEEEETTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAIPSALQSAAAAGGGGLTKVSEKNEGDGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLKVKKRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGSQDDGAGSRPTDNSTDAAGSRQAATDQFMLERFRKRERHRVMRR
Secondary Structure (PSIPRED)
ccccccccccccccccccccccHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHcccccHHHHHccccHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHccccccccccccccHHHHccccccHHHcccccccHHHHccccccHHHHHHHHHHHHHHcccccccccHcccccccHHHHHHHcHHHcccccccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHccccHHHHHHHcHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHccHccc
Coil and Loop (DISEMBL)
menpipqkkekkknFRKRSYEEEeettnklsdDEEERRLALEEIKFLQKQRerksgipaipSALQSAAAaggggltkvseknegdgekdelVLQDTFAQETAVMVEDPNMLKYVEQELAKkrgknidvndrVENDLKHAEDELykipehlkvkkrnseesstqWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLmgraksdfsipssysadyfQRGRDYAEKLRREHpelykdrgsqddgagsrptdnstdaagsrqAATDQFMLERFRKRERHRVMRR
Flexible Loop (DISEMBL)
menpipqkkekkknfrkrsyeeeeettnklsddeeeRRLALEEIKFLQKQRERKSGIPAIPSALQSAAAAGGGGLTKVSEKNEGDGEKDELVLQDTFAQETavmvedpnMLKYVEQELakkrgknidvndrvENDLKHaedelykipehlkvkkrnseesstqwttgiaevqlpIEYKLKNIEETEAAKKLLQEKRLmgraksdfsipssysadyfQRGRDYAEKLRREHPElykdrgsqddgagsrptdnstdaagsrqaatdqfmlerfrkrerhrvmrr
Low Complexity Region (SEG)
MENPIPQkkekkkNFRKRSYEEEEETTNKLSddeeerrlaleeIKFLQKQRERKSGIPAIPSALQSaaaaggggLTKVSEKNEGDGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLKVKKRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGSQDDGAGSRPTDNSTDAAGSRQAATDQFMLERFRKRERHRVMRR
Disordered region (IsUnstruct)
***********************************************************************************************TFAQETAVMVE**NMLKYV*************************************************WTTGIAEVQLPIEYKLKNI****************************************************************************************************
Disordered Region (DISOPRED)
********************************************************************************************************V**PNMLKY*******************************************************AEVQLPIEYKLKNIEETEA****************************FQ************************************************FMLERFRKRERH*****
Disordered Region (DISEMBL)
************************************RRLALEEIKFLQKQRERKSGIPAIPSALQ***********************DELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLKVK***********TTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYK*************************AATDQFMLERFRKR********
Disordered Region (DISPRO)
**********************************EERRLALEEIKFLQKQRERKSGIPAIPSALQSAA*************************QDTFAQETAVMVEDPNMLKYVEQELAKKR************DLKHAEDELYKIPEHLKVKKRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREH********************************TDQFMLERFRKRERH*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MENPIPQKKEKKKNFRKRSYEEEEETTNKxxxxxxxxxxxxxxxxxxxxxRERKSGIPAIPSALQSAAAAGGGGLTKVSEKNEGDGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLKVKKRNSEESSTQWTTGIAEVQLPxxxxxxxxxxxxxxxxxxxxxRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGSQDDGAGSRPTDNSTDAAGSRQAATDQFMLERFRKRERHRVMRR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	282	2.2.26 [Sep-21-2011]
Q9NZ63	289	Uncharacterized protein C	yes	no	0.833	0.813	0.310	9e-17
Q3TQI7	289	Uncharacterized protein C	yes	no	0.833	0.813	0.314	2e-16
Q5RC87	289	Uncharacterized protein C	yes	no	0.833	0.813	0.306	7e-16

>sp|Q9NZ63|CI078_HUMAN Uncharacterized protein C9orf78 OS=Homo sapiens GN=C9orf78 PE=1 SV=1

 Score = 87.4 bits (215), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 82/264 (31%), Positives = 134/264 (50%), Gaps = 29/264 (10%)

Query: 38  RLALEEIKFLQKQRERKSGIPAIP-----------SALQSAAAAGGGGLT---KVSEKNE 83
           RL LEE + +Q  R+R +G+ A+            + +        GG+    K+ E+ +
Sbjct: 28  RLKLEETREVQNLRKRPNGVSAVALLVGEKVQEETTLVDDPFQMKTGGMVDMKKLKERGK 87

Query: 84  GD-GEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDE 142
               E+++L L  +F+ ET    ED +M+KY+E EL K++G  I  ++  +   K+AED 
Sbjct: 88  DKISEEEDLHLGTSFSAETNRRDEDADMMKYIETELKKRKG--IVEHEEQKVKPKNAEDC 145

Query: 143 LYKIPEHLKVK--KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK-KLLQEKRLMG 199
           LY++PE+++V   K+  E  S Q  +GI EV L I+ K+KNI  TE AK +LL E++   
Sbjct: 146 LYELPENIRVSSAKKTEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKARLLAEQQNKK 205

Query: 200 RAKSDFSIPSSYSADYFQRGRDYAEKL------RREHPELYKDR-GSQDDGAGSRPTDNS 252
           +      +P++ + +Y Q  R Y E+L       +E P+    R G  +     R   N 
Sbjct: 206 KDSETSFVPTNMAVNYVQHNRFYHEELNAPIRRNKEEPKARPLRVGDTEKPEPERSPPNR 265

Query: 253 TDAAGSRQAATDQFMLERFRKRER 276
              A  +  ATD +  E+F+K  R
Sbjct: 266 KRPANEK--ATDDYHYEKFKKMNR 287

Homo sapiens (taxid: 9606)

>sp|Q3TQI7|CI078_MOUSE Uncharacterized protein C9orf78 homolog OS=Mus musculus PE=1 SV=2

 Score = 86.7 bits (213), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 133/264 (50%), Gaps = 29/264 (10%)

Query: 38  RLALEEIKFLQKQRERKSGIPA----IPSALQ----------SAAAAGGGGLTKVSEKNE 83
           RL LEE + +Q  R+R +G+ A    +   +Q            A  G   + K+ E+ +
Sbjct: 28  RLKLEETREVQNLRKRPNGVSAAALLVGEKVQEETTLVDDPFQMATGGMVDMKKLKERGK 87

Query: 84  GD-GEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDE 142
               E+++L L  +F+ ET    ED +M+KY+E EL K++G  I   +  +   K+AED 
Sbjct: 88  DKVSEEEDLHLGTSFSAETNRRDEDADMMKYIETELKKRKG--IVEQEEQKAKPKNAEDC 145

Query: 143 LYKIPEHLKVK--KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK-KLLQEKRLMG 199
           LY++PE+++V   K+  E  S Q  +GI EV L I+ K+KNI  TE AK +LL E++   
Sbjct: 146 LYELPENIRVSSAKKTEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKARLLAEQQNKK 205

Query: 200 RAKSDFSIPSSYSADYFQRGRDYAEKL------RREHPELYKDR-GSQDDGAGSRPTDNS 252
           +      +P++ + +Y Q  R Y E+L       +E P+    R G  +     R   N 
Sbjct: 206 KDSETSFVPTNMAVNYVQHNRFYHEELNAPIRRNKEEPKARPLRVGDTEKPEPERSPPNR 265

Query: 253 TDAAGSRQAATDQFMLERFRKRER 276
              A  +  ATD +  E+F+K  R
Sbjct: 266 KRPANEK--ATDDYHYEKFKKMNR 287

Mus musculus (taxid: 10090)

>sp|Q5RC87|CI078_PONAB Uncharacterized protein C9orf78 homolog OS=Pongo abelii PE=2 SV=1

 Score = 84.7 bits (208), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 133/264 (50%), Gaps = 29/264 (10%)

Query: 38  RLALEEIKFLQKQRERKSGIPAIP-----------SALQSAAAAGGGGLT---KVSEKNE 83
           RL LEE + +Q  R+R +G+ A+            + +        GG+    K+ E+ +
Sbjct: 28  RLKLEETREVQNLRKRPNGVSAVALLVGEKVQEETTLVDDPFQMKTGGMVDMKKLKERGK 87

Query: 84  GD-GEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDE 142
               E+++L L  +F+ ET    ED +M+KY+E EL K++G  I  ++  +   K+AED 
Sbjct: 88  DKISEEEDLHLGTSFSAETNRRDEDADMMKYIETELKKRKG--IVEHEEQKVKPKNAEDC 145

Query: 143 LYKIPEHLKVK--KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK-KLLQEKRLMG 199
           LY++PE+++V   K+  E  S Q  +GI EV   I+ K+KNI  TE AK +LL E++   
Sbjct: 146 LYELPENIRVSSAKKTEEMLSNQMLSGIPEVDQGIDAKIKNIISTEDAKARLLAEQQNKK 205

Query: 200 RAKSDFSIPSSYSADYFQRGRDYAEKL------RREHPELYKDR-GSQDDGAGSRPTDNS 252
           +      +P++ + +Y Q  R Y E+L       +E P+    R G  +     R   N 
Sbjct: 206 KDSETSFVPTNMAVNYVQHNRFYHEELNAPIRRNKEEPKARPLRVGDTEKPEPERSPPNR 265

Query: 253 TDAAGSRQAATDQFMLERFRKRER 276
              A  +  ATD +  E+F+K  R
Sbjct: 266 KRPANEK--ATDDYHYEKFKKMNR 287


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.308    0.127    0.340 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,149,519
Number of Sequences: 539616
Number of extensions: 4838902
Number of successful extensions: 29028
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 748
Number of HSP's that attempted gapping in prelim test: 26046
Number of HSP's gapped (non-prelim): 2766
length of query: 282
length of database: 191,569,459
effective HSP length: 116
effective length of query: 166
effective length of database: 128,974,003
effective search space: 21409684498
effective search space used: 21409684498
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 60 (27.7 bits)

Pongo abelii (taxid: 9601)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
224128117	271	predicted protein [Populus trichocarpa]	0.950	0.988	0.806	1e-122
356498525	287	PREDICTED: uncharacterized protein C9orf	0.975	0.958	0.781	1e-119
358248108	288	uncharacterized protein LOC100812323 [Gl	0.975	0.954	0.774	1e-118
297744059	298	unnamed protein product [Vitis vinifera]	0.960	0.909	0.775	1e-110
225437728	270	PREDICTED: uncharacterized protein LOC10	0.950	0.992	0.780	1e-110
255556659	293	Protein C9orf78, putative [Ricinus commu	0.957	0.921	0.767	1e-109
449463519	293	PREDICTED: uncharacterized protein LOC10	0.964	0.928	0.708	1e-109
297848438	277	hypothetical protein ARALYDRAFT_887370 [	0.939	0.956	0.742	1e-107
449481099	305	PREDICTED: uncharacterized LOC101215146	0.964	0.891	0.67	1e-105
217071714	291	unknown [Medicago truncatula]	0.992	0.962	0.715	1e-105

>gi|224128117|ref|XP_002320248.1| predicted protein [Populus trichocarpa] gi|222861021|gb|EEE98563.1| predicted protein [Populus trichocarpa]

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 221/274 (80%), Positives = 244/274 (89%), Gaps = 6/274 (2%)

Query: 10  EKKKNFRKRSYEEEEETTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAIPSALQSAAA 69
           +KK+NFRKR++EE+E +     DDE+ERRLALEE+KFLQKQRERKSGIPA+ +  Q+A  
Sbjct: 3   QKKRNFRKRTFEEDEHSKAS-DDDEQERRLALEEVKFLQKQRERKSGIPALATTSQTATT 61

Query: 70  AGGGGLTKVSEKNEGDGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVN 129
                  K++EK +GDGEK+ELVLQDTFAQETAVMVEDPNML+YVEQELAKKRGKNID  
Sbjct: 62  VAA----KLTEKADGDGEKEELVLQDTFAQETAVMVEDPNMLQYVEQELAKKRGKNIDAT 117

Query: 130 DRVENDLKHAEDELYKIPEHLKVKKRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK 189
           D+VE +LK AEDELYKIPEHLKVKKRNSEESSTQWTTGIAEVQLPIEYKL+NIEETEAAK
Sbjct: 118 DQVETELKRAEDELYKIPEHLKVKKRNSEESSTQWTTGIAEVQLPIEYKLRNIEETEAAK 177

Query: 190 KLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGSQDDG-AGSRP 248
           KLLQEKRLMGR KS+FSIPSSYSADYFQRGRDYAEKLRR+HPELYKDR  QDD  AGS+P
Sbjct: 178 KLLQEKRLMGRPKSEFSIPSSYSADYFQRGRDYAEKLRRDHPELYKDRSLQDDAVAGSKP 237

Query: 249 TDNSTDAAGSRQAATDQFMLERFRKRERHRVMRR 282
            DNSTDAAG RQAATD+FMLERFRKRERHRVMRR
Sbjct: 238 ADNSTDAAGRRQAATDEFMLERFRKRERHRVMRR 271

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498525|ref|XP_003518101.1| PREDICTED: uncharacterized protein C9orf78 homolog [Glycine max]

 Score =  433 bits (1113), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 222/284 (78%), Positives = 245/284 (86%), Gaps = 9/284 (3%)

Query: 7   QKKEKKKNFRKRSY-----EEEEETTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAIP 61
           +++++KKN+RKRS      E  +  +N  SDDE ERR+ALEEIK LQKQRERKSGIPA P
Sbjct: 5   KQQQRKKNYRKRSAPTDKDELPQSQSNNESDDERERRMALEEIKLLQKQRERKSGIPANP 64

Query: 62  SALQSAAAAGGGGLTKVSEKNEGDG-EKDELVLQDTFAQETAVMVEDPNMLKYVEQELAK 120
           S LQ  +  GGG   K +EKN+GDG EKDELVLQDTFAQETAVM EDPNM+KY+E ELAK
Sbjct: 65  S-LQVQSGTGGGLAAKAAEKNDGDGGEKDELVLQDTFAQETAVMDEDPNMVKYIEHELAK 123

Query: 121 KRGKNIDVNDRVENDLKHAEDELYKIPEHLKVKKRNSEESSTQWTTGIAEVQLPIEYKLK 180
           KRG+ ID  D+VEN+LK AEDELYKIPEHLKVK+RNSEESSTQWTTGIAEVQLPIEYKLK
Sbjct: 124 KRGRKIDAADQVENELKRAEDELYKIPEHLKVKRRNSEESSTQWTTGIAEVQLPIEYKLK 183

Query: 181 NIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGSQ 240
           NIEETEAAKKLLQEKRLMGR KSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDR  Q
Sbjct: 184 NIEETEAAKKLLQEKRLMGRTKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRSHQ 243

Query: 241 DDGAGSRPTDNSTDAAGS--RQAATDQFMLERFRKRERHRVMRR 282
           DD +GS+  D+STDAAG+  RQAATD+FMLERFRKRERHRVMRR
Sbjct: 244 DDSSGSKQNDSSTDAAGAVQRQAATDEFMLERFRKRERHRVMRR 287

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358248108|ref|NP_001239815.1| uncharacterized protein LOC100812323 [Glycine max] gi|255645199|gb|ACU23097.1| unknown [Glycine max]

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 220/284 (77%), Positives = 244/284 (85%), Gaps = 9/284 (3%)

Query: 7   QKKEKKKNFRKRSYEEEEE-----TTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAIP 61
           Q++++KKN+RKRS   +E+      +N  SDDE ERR+ALEEIK LQKQRERKSGIPA P
Sbjct: 6   QQQQRKKNYRKRSAPTDEDELPQSQSNNESDDERERRMALEEIKLLQKQRERKSGIPANP 65

Query: 62  SALQSAAAAGGGGLTKVSEKNEGDG-EKDELVLQDTFAQETAVMVEDPNMLKYVEQELAK 120
           S LQ  +  GGG   K +EKN+GDG +KDELVLQDTFAQETAVM EDPNM+ Y+E ELAK
Sbjct: 66  S-LQVQSGTGGGLAAKAAEKNDGDGGDKDELVLQDTFAQETAVMDEDPNMVNYIEHELAK 124

Query: 121 KRGKNIDVNDRVENDLKHAEDELYKIPEHLKVKKRNSEESSTQWTTGIAEVQLPIEYKLK 180
           KRG+ ID  D+ EN+LK AEDELYKIPEHLKVK+RNSEESSTQWTTGIAEVQLPIEYKLK
Sbjct: 125 KRGRKIDAADQAENELKRAEDELYKIPEHLKVKRRNSEESSTQWTTGIAEVQLPIEYKLK 184

Query: 181 NIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGSQ 240
           NIEETEAAKKLLQEKRLMGR KSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDR  Q
Sbjct: 185 NIEETEAAKKLLQEKRLMGRTKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRNHQ 244

Query: 241 DDGAGSRPTDNSTDAAGS--RQAATDQFMLERFRKRERHRVMRR 282
           DD +GS+  D+STDAAG+  RQAATD+FMLERFRKRERHRVMRR
Sbjct: 245 DDSSGSKKNDSSTDAAGAVQRQAATDEFMLERFRKRERHRVMRR 288

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297744059|emb|CBI37029.3| unnamed protein product [Vitis vinifera]

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/276 (77%), Positives = 243/276 (88%), Gaps = 5/276 (1%)

Query: 8   KKEKKKNFRKRSYEEEEETTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAIPSALQSA 67
           K+ +KKNFRKRS E+++   N  S+DEEERRLALEE+KFLQKQRERK GIPAIP+ LQ+ 
Sbjct: 27  KEMQKKNFRKRSIEDDQAKDNNNSEDEEERRLALEEVKFLQKQRERKLGIPAIPT-LQTT 85

Query: 68  AAAGGGGLTKVSEKNE-GDGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNI 126
              G     KV+EKNE  DG+K+ELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRG+NI
Sbjct: 86  ---GVTPTKKVAEKNEVPDGDKEELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGRNI 142

Query: 127 DVNDRVENDLKHAEDELYKIPEHLKVKKRNSEESSTQWTTGIAEVQLPIEYKLKNIEETE 186
           D  ++V NDLK A+DELY +PEHLKVK+RNSEESSTQWTTGIAEVQLP+EYKL+NIEETE
Sbjct: 143 DATNQVGNDLKRADDELYVVPEHLKVKRRNSEESSTQWTTGIAEVQLPVEYKLRNIEETE 202

Query: 187 AAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGSQDDGAGS 246
           AAKKLLQ+KRLMGR K++F+IPSSYSADYFQRGRDYAEKLRREHPELYKD+G QD+G GS
Sbjct: 203 AAKKLLQDKRLMGRTKTEFNIPSSYSADYFQRGRDYAEKLRREHPELYKDKGVQDNGGGS 262

Query: 247 RPTDNSTDAAGSRQAATDQFMLERFRKRERHRVMRR 282
           R  D ST+ AG RQAATD+FML+RFRKRERHRVMRR
Sbjct: 263 RLPDASTEVAGRRQAATDEFMLDRFRKRERHRVMRR 298

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225437728|ref|XP_002280535.1| PREDICTED: uncharacterized protein LOC100250416 [Vitis vinifera]

 Score =  402 bits (1034), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 213/273 (78%), Positives = 241/273 (88%), Gaps = 5/273 (1%)

Query: 11  KKKNFRKRSYEEEEETTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAIPSALQSAAAA 70
           +KKNFRKRS E+++   N  S+DEEERRLALEE+KFLQKQRERK GIPAIP+ LQ+    
Sbjct: 2   QKKNFRKRSIEDDQAKDNNNSEDEEERRLALEEVKFLQKQRERKLGIPAIPT-LQTT--- 57

Query: 71  GGGGLTKVSEKNE-GDGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVN 129
           G     KV+EKNE  DG+K+ELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRG+NID  
Sbjct: 58  GVTPTKKVAEKNEVPDGDKEELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGRNIDAT 117

Query: 130 DRVENDLKHAEDELYKIPEHLKVKKRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK 189
           ++V NDLK A+DELY +PEHLKVK+RNSEESSTQWTTGIAEVQLP+EYKL+NIEETEAAK
Sbjct: 118 NQVGNDLKRADDELYVVPEHLKVKRRNSEESSTQWTTGIAEVQLPVEYKLRNIEETEAAK 177

Query: 190 KLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGSQDDGAGSRPT 249
           KLLQ+KRLMGR K++F+IPSSYSADYFQRGRDYAEKLRREHPELYKD+G QD+G GSR  
Sbjct: 178 KLLQDKRLMGRTKTEFNIPSSYSADYFQRGRDYAEKLRREHPELYKDKGVQDNGGGSRLP 237

Query: 250 DNSTDAAGSRQAATDQFMLERFRKRERHRVMRR 282
           D ST+ AG RQAATD+FML+RFRKRERHRVMRR
Sbjct: 238 DASTEVAGRRQAATDEFMLDRFRKRERHRVMRR 270

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255556659|ref|XP_002519363.1| Protein C9orf78, putative [Ricinus communis] gi|223541430|gb|EEF42980.1| Protein C9orf78, putative [Ricinus communis]

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 224/292 (76%), Positives = 245/292 (83%), Gaps = 22/292 (7%)

Query: 11  KKKNFRKRSYEEEEE-----TTNKLS--DDEEERRLALEEIKFLQKQRERKSGIPAIPSA 63
           KKKNFRKRS EE E+       N  +  DDEEERRLALEE+KFLQKQRERKSGIPAI + 
Sbjct: 4   KKKNFRKRSIEEAEDPESSRNNNNATPDDDEEERRLALEEVKFLQKQRERKSGIPAILTP 63

Query: 64  LQSAAAA----------GGGGLT---KVSEKNEGDGEKDELVLQDTFAQETAVMVEDPNM 110
             SA+++             GL    KV+EKN+GDGEK++LVLQDTFAQETAVMVEDPNM
Sbjct: 64  SSSASSSAAAAAAQLQQNSSGLVSSKKVTEKNDGDGEKEDLVLQDTFAQETAVMVEDPNM 123

Query: 111 LKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLKVKKRNSEESSTQWTTGIAE 170
           L YVEQELAKK GKN+D   +VEN+LK AEDELY IPEHLKVK+RNSEESSTQWTTGIAE
Sbjct: 124 LMYVEQELAKKSGKNVDAT-QVENELKRAEDELYTIPEHLKVKRRNSEESSTQWTTGIAE 182

Query: 171 VQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREH 230
           VQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKS+FSIPSSYSADYFQRGRDYAEKLRREH
Sbjct: 183 VQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSEFSIPSSYSADYFQRGRDYAEKLRREH 242

Query: 231 PELYKDRGSQDDGAGSRPTDNSTDAAGSRQAATDQFMLERFRKRERHRVMRR 282
           PELYKDR SQD+ AGS+P DN+TDA   R+AATD+FMLERFRKRERHRVMRR
Sbjct: 243 PELYKDRNSQDESAGSKPADNNTDAT-RREAATDEFMLERFRKRERHRVMRR 293

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463519|ref|XP_004149481.1| PREDICTED: uncharacterized protein LOC101215146 [Cucumis sativus]

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 204/288 (70%), Positives = 232/288 (80%), Gaps = 16/288 (5%)

Query: 11  KKKNFRKRSYEEEEE-------TTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAIPSA 63
           KKKNFRKR+  + E+        T    ++EEE R+ALEE+KFLQKQRER++GIPA+P  
Sbjct: 6   KKKNFRKRNCYDSEDGGDEANSVTAISEEEEEEHRMALEEVKFLQKQRERRAGIPAVPPV 65

Query: 64  LQSAAAAGGGGL------TKVSEKNE---GDGEKDELVLQDTFAQETAVMVEDPNMLKYV 114
                 AG GG            KNE   G+G+KD+LVLQDTFAQETAVMVEDPNMLKY+
Sbjct: 66  SAQTTTAGAGGARSHKTGGGGGNKNESAGGEGDKDDLVLQDTFAQETAVMVEDPNMLKYI 125

Query: 115 EQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLKVKKRNSEESSTQWTTGIAEVQLP 174
           EQELAKKRG+ ++  +  ENDLK AEDELYKIPEHLKVK+RNS ESSTQWTTGIAEVQLP
Sbjct: 126 EQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESSTQWTTGIAEVQLP 185

Query: 175 IEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELY 234
           IE+KLKNIEETEAAKKLLQEKR +GR+ S+FSIPSSYSADYF RGRDYAEKLRREHPELY
Sbjct: 186 IEFKLKNIEETEAAKKLLQEKRFVGRSTSEFSIPSSYSADYFHRGRDYAEKLRREHPELY 245

Query: 235 KDRGSQDDGAGSRPTDNSTDAAGSRQAATDQFMLERFRKRERHRVMRR 282
           KDR  QDDG+GS+P +  T+AAG RQAATD+FMLERFRKRERHRVMRR
Sbjct: 246 KDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR 293

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297848438|ref|XP_002892100.1| hypothetical protein ARALYDRAFT_887370 [Arabidopsis lyrata subsp. lyrata] gi|297337942|gb|EFH68359.1| hypothetical protein ARALYDRAFT_887370 [Arabidopsis lyrata subsp. lyrata]

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 208/280 (74%), Positives = 237/280 (84%), Gaps = 15/280 (5%)

Query: 12  KKNFRKRSYEEE--EETTNK--LSDDEEERRLALEEIKFLQKQRERKSGIPAIPSALQSA 67
           K+NFRKRS+EEE  +   NK  +SD+EE+RRLALEE+KFLQK RERK GIPA+ +A  S 
Sbjct: 4   KRNFRKRSFEEEEEDNDVNKAAISDEEEKRRLALEEVKFLQKLRERKLGIPALSTAQSSI 63

Query: 68  AAAGGGGLTKVSEKNEGDGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNID 127
                 G  K  EK E +GEK+ELVLQDTFAQETAV++EDPNM+KY+EQELAKKRGKNID
Sbjct: 64  ------GKVKPVEKTEAEGEKEELVLQDTFAQETAVLIEDPNMVKYIEQELAKKRGKNID 117

Query: 128 VNDRVENDLKHAEDELYKIPEHLKVKKRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEA 187
             + VEN+LK  EDELYKIP+HLKVKKR+SEESSTQWTTGIAEVQLPIEYKLKNIEETEA
Sbjct: 118 DAEEVENELKRVEDELYKIPDHLKVKKRSSEESSTQWTTGIAEVQLPIEYKLKNIEETEA 177

Query: 188 AKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGS-QDDGAGS 246
           AKKLLQE+RLMGR KS+FSIPSSYSADYFQRG+DYAEKLRREHPELYKDRG  Q DG G+
Sbjct: 178 AKKLLQERRLMGRPKSEFSIPSSYSADYFQRGKDYAEKLRREHPELYKDRGGPQADGEGA 237

Query: 247 RP----TDNSTDAAGSRQAATDQFMLERFRKRERHRVMRR 282
           +P    ++N+ D+  SRQAATDQ MLERFRKRER+RVMRR
Sbjct: 238 KPSTSSSNNNADSGKSRQAATDQIMLERFRKRERNRVMRR 277

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449481099|ref|XP_004156081.1| PREDICTED: uncharacterized LOC101215146 [Cucumis sativus]

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/300 (67%), Positives = 232/300 (77%), Gaps = 28/300 (9%)

Query: 11  KKKNFRKRSYEEEEE-------TTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAIPSA 63
           KKKNFRKR+  + E+        T    ++EEE R+ALEE+KFLQKQRER++GIPA+P  
Sbjct: 6   KKKNFRKRNCYDSEDGGDEANSVTAISEEEEEEHRMALEEVKFLQKQRERRAGIPAVPPV 65

Query: 64  ------------------LQSAAAAGGGGLTKVSEKNE---GDGEKDELVLQDTFAQETA 102
                             ++ +  A          KNE   G+G+KD+LVLQDTFAQETA
Sbjct: 66  SAQTTTAGAGGASGGGGLVRKSTDANSKTGGGGGNKNESAGGEGDKDDLVLQDTFAQETA 125

Query: 103 VMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLKVKKRNSEESST 162
           VMVEDPNMLKY+EQELAKKRG+ ++  +  ENDLK AEDELYKIPEHLKVK+RNS ESST
Sbjct: 126 VMVEDPNMLKYIEQELAKKRGRTVETVEGAENDLKQAEDELYKIPEHLKVKRRNSNESST 185

Query: 163 QWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDY 222
           QWTTGIAEVQLPIE+KLKNIEETEAAKKLLQEKR +GR+ S+FSIPSSYSADYF RGRDY
Sbjct: 186 QWTTGIAEVQLPIEFKLKNIEETEAAKKLLQEKRFVGRSTSEFSIPSSYSADYFHRGRDY 245

Query: 223 AEKLRREHPELYKDRGSQDDGAGSRPTDNSTDAAGSRQAATDQFMLERFRKRERHRVMRR 282
           AEKLRREHPELYKDR  QDDG+GS+P +  T+AAG RQAATD+FMLERFRKRERHRVMRR
Sbjct: 246 AEKLRREHPELYKDRSLQDDGSGSKPAETGTEAAGQRQAATDEFMLERFRKRERHRVMRR 305

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217071714|gb|ACJ84217.1| unknown [Medicago truncatula]

 Score =  385 bits (990), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 209/292 (71%), Positives = 236/292 (80%), Gaps = 12/292 (4%)

Query: 1   MENPIPQKKEKKKNFRKRSYEEEEETT-----NKLSDDEEERRLALEEIKFLQKQRERKS 55
           MEN   ++K ++KN+RKR+  EE +       N  SDDE ERRLALEEIK LQKQRERKS
Sbjct: 1   MENS-KEEKPRRKNYRKRTPTEEHDQPPQSQQNNDSDDESERRLALEEIKLLQKQRERKS 59

Query: 56  GIPAIPSALQSAAAAGGGGLTKV---SEKNEGDGEKDELVLQDTFAQETAVMVEDPNMLK 112
           GIPA  +  QS      G  +K    ++     G+KD+LVLQDTFAQETAVM EDPNM+K
Sbjct: 60  GIPATLTLQQSQPGISSGLASKAVDKNDAGGDGGDKDDLVLQDTFAQETAVMDEDPNMVK 119

Query: 113 YVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLKVKKRNSEESSTQWTTGIAEVQ 172
           Y+ QELAKKRG+NID  D+VEN+LK AEDELY IP+HLKVKKRNSEESSTQWTTGIAE+Q
Sbjct: 120 YIGQELAKKRGRNIDEEDQVENELKRAEDELYTIPDHLKVKKRNSEESSTQWTTGIAEIQ 179

Query: 173 LPIEYKLKNIEETEAAKKLLQEKRLM-GRAKSDFSIPSSYSADYFQRGRDYAEKLRREHP 231
           LPIEYKLKNIEETEAAKKLLQEKRLM GRAKSDFSIPSSYSADYFQRGRDYAEKLRREHP
Sbjct: 180 LPIEYKLKNIEETEAAKKLLQEKRLMVGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHP 239

Query: 232 ELYKDRGSQDDGAGSRPTDNSTDAAGS--RQAATDQFMLERFRKRERHRVMR 281
           ELYKDR  QDD + S+  ++S+DA G+  RQAATDQFMLERF+KRERHRV R
Sbjct: 240 ELYKDRSQQDDNSASKQNESSSDAPGAVQRQAATDQFMLERFKKRERHRVRR 291

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	282
TAIR|locus:2204888	279	AT1G02330 "AT1G02330" [Arabido	0.936	0.946	0.709	1.2e-95
UNIPROTKB|F1P4D4	293	C17H9orf78 "Uncharacterized pr	0.705	0.679	0.349	1e-22
UNIPROTKB|F1RQE0	289	C9orf78 "Uncharacterized prote	0.702	0.685	0.342	4.9e-21
UNIPROTKB|Q1JQC8	265	C11H9ORF78 "Uncharacterized pr	0.702	0.747	0.338	1e-20
UNIPROTKB|Q9NZ63	289	C9orf78 "Uncharacterized prote	0.702	0.685	0.338	1e-20
MGI|MGI:2385132	289	BC005624 "cDNA sequence BC0056	0.702	0.685	0.338	1e-20
ZFIN|ZDB-GENE-041010-15	289	zgc:103692 "zgc:103692" [Danio	0.709	0.692	0.311	3.5e-20

TAIR|locus:2204888 AT1G02330 "AT1G02330" [Arabidopsis thaliana (taxid:3702)]

 Score = 951 (339.8 bits), Expect = 1.2e-95, P = 1.2e-95
 Identities = 198/279 (70%), Positives = 222/279 (79%)

Query:    14 NFRKRSYEEEEETT--NK--LSXXXXXXXXXXXXIKFLQKQRERKSGIPAIPSALQSXXX 69
             NFRKRS+EEEEE    NK  +S            +KFLQK RERK GIPA+ S  QS   
Sbjct:     6 NFRKRSFEEEEEDNDVNKAAISEEEEKRRLALEEVKFLQKLRERKLGIPALSSTAQSSIG 65

Query:    70 XXXXXLTKVSEKNEGDGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVN 129
                    K  EK E +GEK+ELVLQDTFAQETAV++EDPNM+KY+EQELAKKRG+NID  
Sbjct:    66 K-----VKPVEKTETEGEKEELVLQDTFAQETAVLIEDPNMVKYIEQELAKKRGRNIDDA 120

Query:   130 DRVENDLKHAEDELYKIPEHLKVKKRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK 189
             + VEN+LK  EDELYKIP+HLKVKKR+SEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK
Sbjct:   121 EEVENELKRVEDELYKIPDHLKVKKRSSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK 180

Query:   190 KLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRGS-QDDGAGSRP 248
             KLLQE+RLMGR KS+FSIPSSYSADYFQRG+DYAEKLRREHPELYKDRG  Q DG  ++P
Sbjct:   181 KLLQERRLMGRPKSEFSIPSSYSADYFQRGKDYAEKLRREHPELYKDRGGPQADGEAAKP 240

Query:   249 -----TDNSTDAAGSRQAATDQFMLERFRKRERHRVMRR 282
                  T+N+ D+  SRQAATDQ MLERFRKRER+RVMRR
Sbjct:   241 STSSSTNNNADSGKSRQAATDQIMLERFRKRERNRVMRR 279

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1P4D4 C17H9orf78 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 74/212 (34%), Positives = 116/212 (54%)

Query:    75 LTKVSEKNEGD-GEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVE 133
             + K+ E+ +    E+++L L  +F+ ET    ED +M+KY+E EL K++G  I  N+  +
Sbjct:    83 MKKLKERGKDRINEEEDLNLGTSFSAETNRRDEDADMMKYIETELKKRKG--IVENEEQK 140

Query:   134 NDLKHAEDELYKIPEHLKVK--KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK-K 190
               LK+AED LY++PE+++V   K+  E  S Q  +GI EV L I+ K+KNI  TE AK K
Sbjct:   141 VKLKNAEDSLYELPENIRVSSAKKTEEMLSNQMLSGIPEVDLGIDAKIKNIISTEEAKAK 200

Query:   191 LLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLR---REHPELYKDRGSQDDGAGSR 247
             LL E++   +      +P++ + +Y Q  R Y E+L    R + E  K R  +  G   R
Sbjct:   201 LLAEQQNKKKDSETSFVPTNMAVNYVQHNRFYHEELNAPVRRNKEEPKPRPLRV-GDTER 259

Query:   248 PTDNSTDAAGSR---QAATDQFMLERFRKRER 276
             P    +     R   + ATD +  E+F+K  R
Sbjct:   260 PEPERSPPNRKRPPNEKATDDYHYEKFKKMNR 291

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

UNIPROTKB|F1RQE0 C9orf78 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 73/213 (34%), Positives = 115/213 (53%)

Query:    75 LTKVSEKNEGD-GEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVE 133
             + K+ E+ +    E+++L L  +F+ ET    ED +M+KY+E EL K++G  I  ++  +
Sbjct:    79 MKKLKERGKDKISEEEDLHLGTSFSAETNRRDEDADMMKYIETELKKRKG--IVEHEEQK 136

Query:   134 NDLKHAEDELYKIPEHLKVK--KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK-K 190
                K+AED LY++PE+++V   KR  E  S Q  +GI EV L I+ K+KNI  TE AK +
Sbjct:   137 VKPKNAEDCLYELPENIRVSSAKRTEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKAR 196

Query:   191 LLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKL----RR--EHPELYKDR-GSQDDG 243
             LL E++   +      +P++ + +Y Q  R Y E+L    RR  E P+    R G  +  
Sbjct:   197 LLAEQQNKKKDSETSFVPTNMAVNYVQHNRFYHEELNAPIRRNKEEPKARPLRVGDTEKP 256

Query:   244 AGSRPTDNSTDAAGSRQAATDQFMLERFRKRER 276
                R   N    A  +  ATD +  E+F+K  R
Sbjct:   257 EPERSPPNRKRPANEK--ATDDYHYEKFKKMNR 287

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q1JQC8 C11H9ORF78 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 72/213 (33%), Positives = 115/213 (53%)

Query:    75 LTKVSEKNEGD-GEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVE 133
             + K+ E+ +    E+++L L  +F+ ET    ED +M+KY+E EL K++G  I  ++  +
Sbjct:    55 MKKLKERGKDKISEEEDLHLGTSFSAETNRRDEDADMMKYIETELKKRKG--IVEHEEQK 112

Query:   134 NDLKHAEDELYKIPEHLKVK--KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK-K 190
                K+AED LY++PE+++V   K+  E  S Q  +GI EV L I+ K+KNI  TE AK +
Sbjct:   113 VKPKNAEDCLYELPENIRVSSAKKTEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKAR 172

Query:   191 LLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKL----RR--EHPELYKDR-GSQDDG 243
             LL E++   +      +P++ + +Y Q  R Y E+L    RR  E P+    R G  +  
Sbjct:   173 LLAEQQNKKKDSETSFVPTNMAVNYVQHNRFYHEELNAPIRRNKEEPKARPLRVGDTEKP 232

Query:   244 AGSRPTDNSTDAAGSRQAATDQFMLERFRKRER 276
                R   N    A  +  ATD +  E+F+K  R
Sbjct:   233 EPERSPPNRKRPANEK--ATDDYHYEKFKKMNR 263

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|Q9NZ63 C9orf78 "Uncharacterized protein C9orf78" [Homo sapiens (taxid:9606)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 72/213 (33%), Positives = 115/213 (53%)

Query:    75 LTKVSEKNEGD-GEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVE 133
             + K+ E+ +    E+++L L  +F+ ET    ED +M+KY+E EL K++G  I  ++  +
Sbjct:    79 MKKLKERGKDKISEEEDLHLGTSFSAETNRRDEDADMMKYIETELKKRKG--IVEHEEQK 136

Query:   134 NDLKHAEDELYKIPEHLKVK--KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK-K 190
                K+AED LY++PE+++V   K+  E  S Q  +GI EV L I+ K+KNI  TE AK +
Sbjct:   137 VKPKNAEDCLYELPENIRVSSAKKTEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKAR 196

Query:   191 LLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKL----RR--EHPELYKDR-GSQDDG 243
             LL E++   +      +P++ + +Y Q  R Y E+L    RR  E P+    R G  +  
Sbjct:   197 LLAEQQNKKKDSETSFVPTNMAVNYVQHNRFYHEELNAPIRRNKEEPKARPLRVGDTEKP 256

Query:   244 AGSRPTDNSTDAAGSRQAATDQFMLERFRKRER 276
                R   N    A  +  ATD +  E+F+K  R
Sbjct:   257 EPERSPPNRKRPANEK--ATDDYHYEKFKKMNR 287

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

MGI|MGI:2385132 BC005624 "cDNA sequence BC005624" [Mus musculus (taxid:10090)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 72/213 (33%), Positives = 114/213 (53%)

Query:    75 LTKVSEKNEGD-GEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVE 133
             + K+ E+ +    E+++L L  +F+ ET    ED +M+KY+E EL K++G  I   +  +
Sbjct:    79 MKKLKERGKDKVSEEEDLHLGTSFSAETNRRDEDADMMKYIETELKKRKG--IVEQEEQK 136

Query:   134 NDLKHAEDELYKIPEHLKVK--KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK-K 190
                K+AED LY++PE+++V   K+  E  S Q  +GI EV L I+ K+KNI  TE AK +
Sbjct:   137 AKPKNAEDCLYELPENIRVSSAKKTEEMLSNQMLSGIPEVDLGIDAKIKNIISTEDAKAR 196

Query:   191 LLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKL----RR--EHPELYKDR-GSQDDG 243
             LL E++   +      +P++ + +Y Q  R Y E+L    RR  E P+    R G  +  
Sbjct:   197 LLAEQQNKKKDSETSFVPTNMAVNYVQHNRFYHEELNAPIRRNKEEPKARPLRVGDTEKP 256

Query:   244 AGSRPTDNSTDAAGSRQAATDQFMLERFRKRER 276
                R   N    A  +  ATD +  E+F+K  R
Sbjct:   257 EPERSPPNRKRPANEK--ATDDYHYEKFKKMNR 287

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-041010-15 zgc:103692 "zgc:103692" [Danio rerio (taxid:7955)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 66/212 (31%), Positives = 112/212 (52%)

Query:    75 LTKVSEKNEG-DGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVE 133
             + KV +++     ++++L L  +F+ ET    ED +M+KY+E EL KK+G  ++  ++ +
Sbjct:    78 MKKVKDRSRDMTVDENDLNLGTSFSAETNRRDEDADMMKYIETELKKKKGM-VEAEEQ-K 135

Query:   134 NDLKHAEDELYKIPEHLKVK--KRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAK-K 190
               +K+ ED LY++PE++ V   K+  E  S Q  +GI EV L I+ K+KNI  TE AK K
Sbjct:   136 VKVKNPEDLLYELPENINVSSAKKTEEMLSNQMLSGIPEVDLGIDAKIKNIINTEEAKAK 195

Query:   191 LLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAE------KLRREHPELYKDRGSQDDGA 244
             LL E+R   +      +P++ + +Y Q  R Y E      +  RE P+    R    +  
Sbjct:   196 LLAEQRNKKKDSGTSFVPTNIAVNYVQHNRFYHEDSNAPQRRNREEPKARPLRVGDTEKP 255

Query:   245 GSRPTDNSTDAAGSRQAATDQFMLERFRKRER 276
                 +  +     + + ATD +  E+F+K  R
Sbjct:   256 APEASPPNFRKRPNNEKATDDYHYEKFKKMNR 287


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.309   0.127   0.344    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      282       256   0.00086  114 3  11 23  0.42    34
                                                     32  0.48    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  563 (60 KB)
  Total size of DFA:  166 KB (2099 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.70u 0.14s 28.84t   Elapsed:  00:00:01
  Total cpu time:  28.70u 0.14s 28.84t   Elapsed:  00:00:01
  Start:  Fri May 10 04:04:54 2013   End:  Fri May 10 04:04:55 2013

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5RC87	CI078_PONAB	No assigned EC number	0.3068	0.8333	0.8131	yes	no
Q3TQI7	CI078_MOUSE	No assigned EC number	0.3143	0.8333	0.8131	yes	no
Q9NZ63	CI078_HUMAN	No assigned EC number	0.3106	0.8333	0.8131	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_XIV0499 hypothetical protein (271 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	282
pfam07052	102	pfam07052, Hep_59, Hepatocellular carcinoma-associ	7e-30

>gnl|CDD|219280 pfam07052, Hep_59, Hepatocellular carcinoma-associated antigen 59

 Score =  108 bits (271), Expect = 7e-30
 Identities = 56/103 (54%), Positives = 69/103 (66%), Gaps = 5/103 (4%)

Query: 95  DTFAQETAVMVEDPNMLKYVEQELAKKRGKNID----VNDRVENDLKHAEDELYKIPEHL 150
           D F +ET    ED +M+KY+E+ELAK++G+  D     +D+  N+LK AEDELY +PEHL
Sbjct: 1   DRFTKETGQRDEDAHMMKYIEEELAKRKGQAADADAEDSDKAANNLKRAEDELYALPEHL 60

Query: 151 KVKKRNSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQ 193
           KVKK N E  S Q   GI EV L IE KLKNIE TE AK+ L 
Sbjct: 61  KVKK-NEEMLSNQMLGGIPEVDLGIEAKLKNIERTEKAKRRLL 102

This family represents a conserved region approximately 100 residues long within mammalian hepatocellular carcinoma-associated antigen 59 and similar proteins. Family members are found in a variety of eukaryotes, mainly as hypothetical proteins. Length = 102

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	282
KOG3345	275	consensus Uncharacterized conserved protein [Funct	100.0
PF07052	104	Hep_59: Hepatocellular carcinoma-associated antige	100.0

>KOG3345 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.6e-72  Score=504.88  Aligned_cols=257  Identities=42%  Similarity=0.598  Sum_probs=212.5

Q ss_pred             ccccccccccccCCcchhhccCCCCchHHHHhhcHHHHHHHHHhhccCCCcccccccccccccc--------CCCCcccc
Q 023468            7 QKKEKKKNFRKRSYEEEEETTNKLSDDEEERRLALEEIKFLQKQRERKSGIPAIPSALQSAAAA--------GGGGLTKV   78 (282)
Q Consensus         7 ~~~kkkK~~RkR~~~~d~e~~~~~~e~eee~~~~leeikelQKlR~R~~GI~a~~la~g~~~~~--------g~g~~~~~   78 (282)
                      .|+|.+..+++|...++++..   ++++++.+++|+||++||+||.|++||+...|++|.+.++        +||++.+.
T Consensus         4 ~frk~~~k~~~rk~l~~~~~~---~eEeeerrl~leeikelQrlReRknGvs~v~lavgeeala~~d~~qm~~Ggmv~~k   80 (275)
T KOG3345|consen    4 IFRKVKFKIQKRKNLEDDDVA---AEEEEERRLALEEIKELQRLRERKNGVSEVELAVGEEALALEDPFQMKTGGMVDMK   80 (275)
T ss_pred             chhhhHHHHHHhhcchhhhhh---hhhHHHHHhhHHHHHHHHHHHhccCCcchhhhhhhhhhhhccCchhcccCcceehH
Confidence            455666667777766555422   5567788999999999999999999999999999974432        66666554


Q ss_pred             ccccCCCccc-hhhhhhcchhhhccccCcchhHHHHHHHHHHHhhCCCCCCCccccccccchhhhhhcCCcccccc--cc
Q 023468           79 SEKNEGDGEK-DELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDVNDRVENDLKHAEDELYKIPEHLKVK--KR  155 (282)
Q Consensus        79 ~~k~~~~~e~-~~~~l~~~Ft~eT~~~DeD~hMmkYIE~eLaKRk~~~~~~~~~~~~~~~~~~~~Ly~~pe~l~v~--kr  155 (282)
                      ..+..+..+. ..-+|+.+|+++|+.+|+|++||+|||++|+||+|..+.+.+.+.+.+++++||||++|+||+++  ++
T Consensus        81 K~k~~~mkeas~eqdlgtqFs~ET~~rdEdeem~KYIeqeLqkrkg~~~~e~eeqk~k~~naED~Ly~lpdhlk~ssskk  160 (275)
T KOG3345|consen   81 KLKERGMKEASEEQDLGTQFSAETNRRDEDEEMMKYIEQELQKRKGTSIVEHEEQKNKPKNAEDCLYELPDHLKVSSSKK  160 (275)
T ss_pred             HhhhhhhhHHHHhhhhhHHHHHHHhcccccHHHHHHHHHHHHHhhccchhhhhhhhcccCCHHHHHHhhhhhhccccccc
Confidence            4443332222 23369999999999999999999999999999999888888888899999999999999999998  88


Q ss_pred             cccccccccccCCccccCChhHHhhcHHHHHHHHHHHHHHHhccCCCCCCCCCCccchhhhhcchhhHHHHHhhCccccc
Q 023468          156 NSEESSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRREHPELYK  235 (282)
Q Consensus       156 ~~e~~s~~mlsgI~EVDLGieaKlkNIe~TE~AKr~L~e~~~~~~~~~~~~~p~n~a~n~~qh~r~~~~~~~~~~~~~~~  235 (282)
                      ++||+|+|||+|||||||||++||+||++||+|||+|+++++++++++++|||+|||||||||||||++.+.+.      
T Consensus       161 s~EmlS~qml~GIpEVdLgI~~kikNI~eTE~aKrlLqe~~~~~~~g~~~~ipt~~a~ny~qr~rf~~e~~~~~------  234 (275)
T KOG3345|consen  161 SEEMLSNQMLSGIPEVDLGIDAKIKNIEETEDAKRLLQEQQNKKKDGETSFIPTNMAVNYVQRNRFYHEELNRD------  234 (275)
T ss_pred             hHHHHHHHHHcCCcccccchhhhhhhHHhhHHHHHHHHHHHhccCCCCCCCCccchhhhHHHhhhhhHHHhccc------
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998652      


Q ss_pred             ccCCCCCCCCCCCCCCCC---CCCCCCCCcchHHHHHHHHHHHHh
Q 023468          236 DRGSQDDGAGSRPTDNST---DAAGSRQAATDQFMLERFRKRERH  277 (282)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~---~~~~~~~~ATDd~~~erFrK~~r~  277 (282)
                          +..++ ..+.++.+   ..++.+++|||||||||||||+|+
T Consensus       235 ----r~~d~-e~~ep~~s~~~~~np~~~~atddyhyekfrk~~rr  274 (275)
T KOG3345|consen  235 ----RQADT-EKAEPSTSPSTNNNPDRQAATDDYHYEKFRKRERR  274 (275)
T ss_pred             ----hhccc-cccCCCCCccccCChhhhhhhhHHHHHHHHHHhcc
Confidence                11111 22222222   244669999999999999999994

>PF07052 Hep_59: Hepatocellular carcinoma-associated antigen 59; InterPro: IPR010756 This family represents a conserved region approximately 100 residues long within mammalian hepatocellular carcinoma-associated antigen 59 and similar proteins

Probab=100.00  E-value=4e-35  Score=236.99  Aligned_cols=98  Identities=48%  Similarity=0.686  Sum_probs=84.6

Q ss_pred             cchhhhccccCcchhHHHHHHHHHHHhhCCCCCC------CccccccccchhhhhhcCCcccccccccccccccccccCC
Q 023468           95 DTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDV------NDRVENDLKHAEDELYKIPEHLKVKKRNSEESSTQWTTGI  168 (282)
Q Consensus        95 ~~Ft~eT~~~DeD~hMmkYIE~eLaKRk~~~~~~------~~~~~~~~~~~~~~Ly~~pe~l~v~kr~~e~~s~~mlsgI  168 (282)
                      ++|++|||++|||+|||+|||++|++|++.....      .......+.+..++||.+|++|+ .++.++++|++|||||
T Consensus         1 ~~F~~qT~~~d~DkhM~~YIE~eL~kr~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~l~-~~~~~~~~s~~ml~gI   79 (104)
T PF07052_consen    1 DRFTAQTGQRDVDKHMMKYIEEELAKRKGRAAESDAEQSDSESSANNSDPPEDELYRLPEHLK-AKRSEEMLSNQMLGGI   79 (104)
T ss_pred             CcccccccchhHHHHHHHHHHHHHHHhhccCcccccccccccccccccCcHHHHHHhCcHHhh-cccccccccHHHhcCC
Confidence            5899999999999999999999999999976211      12233455667789999999999 6667899999999999


Q ss_pred             ccccCChhHHhhcHHHHHHHHHHHH
Q 023468          169 AEVQLPIEYKLKNIEETEAAKKLLQ  193 (282)
Q Consensus       169 ~EVDLGieaKlkNIe~TE~AKr~L~  193 (282)
                      |||||||++||+||++||+|||.|+
T Consensus        80 ~EVdLg~eaklkNIe~TE~Akr~ll  104 (104)
T PF07052_consen   80 PEVDLGIEAKLKNIERTEKAKRRLL  104 (104)
T ss_pred             ceecCcHHHHHhhHHHHHHHHHhcC
Confidence            9999999999999999999998774

Family members are found in a variety of eukaryotes, mainly as hypothetical proteins.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	282
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 4e-05
 Identities = 33/258 (12%), Positives = 66/258 (25%), Gaps = 81/258 (31%)

Query: 17  KRSYEEEEETTNKLSDDEEERRLALEEIKFLQKQ-----RERKSGIPAIPSALQSAAAAG 71
             ++   +  +  L+ DE +  L     K+L  +     RE  +  P             
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLL----KYLDCRPQDLPREVLTTNP------------- 327

Query: 72  GGGLTKVSEKNEGDGEKDELVLQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNID--VN 129
                                L    A     + +        +     K    I+  +N
Sbjct: 328 -------------------RRL-SIIA---ESIRDGLATWDNWKHVNCDKLTTIIESSLN 364

Query: 130 DRVENDLKHAEDELY------KIPEH-LKV------------------KKRNSEESSTQW 164
                + +   D L        IP   L +                  K    E+   + 
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKES 424

Query: 165 TTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLM-GRAKSDFSIPS--SYSADYFQ---R 218
           T  I  + L  E K+K   E    + ++    +       D   P    Y   +     +
Sbjct: 425 TISIPSIYL--ELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLK 482

Query: 219 GRDYAEKLRREHPELYKD 236
             ++ E++      ++ D
Sbjct: 483 NIEHPERM-TLFRMVFLD 499

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 5e-04
 Identities = 42/221 (19%), Positives = 78/221 (35%), Gaps = 49/221 (22%)

Query: 33  DEEERRLALEEIKFLQKQRERKSGIPAIPSALQSAAAAGGGGLTKVSEKNEGDGEKDELV 92
           D  +  L+ EEI  +   ++  SG   +   L S           V +  E     +   
Sbjct: 40  DMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEM------VQKFVEEVLRINYKF 93

Query: 93  LQDTFAQETAVMVEDP--NMLKYVEQELAKKRGKNIDVNDRVENDL-KHAEDELYKIPEH 149
           L      E       P      Y+EQ             DR+ ND    A+  + ++  +
Sbjct: 94  LMSPIKTEQ----RQPSMMTRMYIEQR------------DRLYNDNQVFAKYNVSRLQPY 137

Query: 150 LKVKKRNSEESSTQWTT--GIA---------------EVQLPIEYK-----LKNIEETEA 187
           LK+++   E    +     G+                +VQ  +++K     LKN    E 
Sbjct: 138 LKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPET 197

Query: 188 AKKLLQEKRLMGRAKSDFSIPSSYSADYFQRGRDYAEKLRR 228
             ++LQ  +L+ +   +++  S +S++   R      +LRR
Sbjct: 198 VLEMLQ--KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRR 236

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00