Citrus Sinensis ID: 023476

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-
Protein Sequence
MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQAHY
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccccccEEEEEEEccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHccccccEEEEEEccccccccHHHHccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccEccEEEEEEcccEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccHccccc
Coil and Loop (DISEMBL)
MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAfsmqtpnpyqypigkkrmqplGILVFASVMATLGLQIILESLRTlvsnedqfnltkeQEQWVVGIMLSVTLVKLLLVVYCRAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVLENVNslvgrsaaPEYLQKLTYLCWnhhksirhidtVRAYTFGSHYFVEVDivlpasmplqeaHDIGESLQEKLELLPEIERAFVHLDyeythrpehaqahy
Flexible Loop (DISEMBL)
MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQAHY
Low Complexity Region (SEG)
MVLFAAKVYASVKSGSLAIIASTldslldllsGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMlsvtlvklllvvYCRAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQAHY
Disordered region (IsUnstruct)
**LFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYT**********
Disordered Region (DISOPRED)
MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYT**********
Disordered Region (DISEMBL)
MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQAHY
Disordered Region (DISPRO)
MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYT**********
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQAHY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	281	2.2.26 [Sep-21-2011]
Q5NA18	415	Metal tolerance protein 5	yes	no	0.996	0.674	0.882	1e-142
O80632	394	Metal tolerance protein 1	yes	no	0.996	0.710	0.914	1e-130
Q0DHJ5	376	Metal tolerance protein 6	no	no	0.857	0.640	0.739	1e-110
Q9SAJ7	402	Metal tolerance protein 9	no	no	0.978	0.684	0.699	1e-109
Q9LDU0	391	Metal tolerance protein 7	no	no	0.978	0.703	0.695	1e-108
Q0WU02	428	Metal tolerance protein 1	no	no	0.978	0.642	0.692	1e-108
Q10PP8	397	Metal tolerance protein 4	no	no	0.982	0.695	0.608	7e-96
Q9M2P2	411	Putative metal tolerance	no	no	0.978	0.669	0.612	4e-94
Q6Z7K5	410	Metal tolerance protein 3	no	no	0.982	0.673	0.576	4e-92
P21559	301	Protein p34 OS=Rickettsia	yes	no	0.907	0.847	0.250	3e-14

>sp|Q5NA18|MTP5_ORYSJ Metal tolerance protein 5 OS=Oryza sativa subsp. japonica GN=MTP5 PE=2 SV=1

 Score =  502 bits (1293), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 247/280 (88%), Positives = 271/280 (96%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
           MVLFAAKVYASV+SGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPY+YPIGKKRMQP
Sbjct: 134 MVLFAAKVYASVRSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYRYPIGKKRMQP 193

Query: 61  LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC 120
           LGILVFASVMATLGLQIILES+R+L+S+ D+F+LTKEQE+WVV IML+VTLVKL LV+YC
Sbjct: 194 LGILVFASVMATLGLQIILESVRSLLSDGDEFSLTKEQEKWVVDIMLAVTLVKLALVLYC 253

Query: 121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVL 180
           R FTNEIVKAYAQDHFFDVITN+IGLVA LLA YI+ W+DPVGAIILA+YTIRTWSMTVL
Sbjct: 254 RTFTNEIVKAYAQDHFFDVITNMIGLVAALLATYIEGWIDPVGAIILAIYTIRTWSMTVL 313

Query: 181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 240
           ENV+SLVG+SA+PEYLQKLTYLCWNHHK++RHIDTVRAYTFGSHYFVEVDIVLP+SMPLQ
Sbjct: 314 ENVHSLVGQSASPEYLQKLTYLCWNHHKAVRHIDTVRAYTFGSHYFVEVDIVLPSSMPLQ 373

Query: 241 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQAH 280
           EAHDIGE+LQEKLE LPEIERAFVHLDYE+THRPEHA +H
Sbjct: 374 EAHDIGEALQEKLERLPEIERAFVHLDYEFTHRPEHALSH 413

Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis.
Oryza sativa subsp. japonica (taxid: 39947)

>sp|O80632|MTP11_ARATH Metal tolerance protein 11 OS=Arabidopsis thaliana GN=MTP11 PE=2 SV=1

 Score =  462 bits (1190), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 256/280 (91%), Positives = 271/280 (96%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
           M+LFAAKVYASV SGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP
Sbjct: 114 MLLFAAKVYASVTSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 173

Query: 61  LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC 120
           LGILVFASVMATLGLQIILESLRT++S+  +FNLTKEQE WVVGIMLSVTLVKLLLV+YC
Sbjct: 174 LGILVFASVMATLGLQIILESLRTMLSSHKEFNLTKEQESWVVGIMLSVTLVKLLLVLYC 233

Query: 121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVL 180
           R+FTNEIVKAYAQDHFFDVITNIIGL+AV+LANYID W+DPVGAIILALYTIRTWSMTVL
Sbjct: 234 RSFTNEIVKAYAQDHFFDVITNIIGLIAVILANYIDYWIDPVGAIILALYTIRTWSMTVL 293

Query: 181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 240
           ENVNSLVG+SA PEYLQKLTYLCWNHHK+IRHIDTVRAYTFGSHYFVEVDIVLPA MPLQ
Sbjct: 294 ENVNSLVGKSARPEYLQKLTYLCWNHHKAIRHIDTVRAYTFGSHYFVEVDIVLPADMPLQ 353

Query: 241 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQAH 280
            AHDIGESLQEKLELL EIERAFVHLDYEYTH+PEHA++H
Sbjct: 354 VAHDIGESLQEKLELLEEIERAFVHLDYEYTHKPEHARSH 393

Cation/proton antiporter involved in endogenous manganese tolerance probably through vesicular trafficking and exocytosis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q0DHJ5|MTP6_ORYSJ Metal tolerance protein 6 OS=Oryza sativa subsp. japonica GN=MTP6 PE=2 SV=2

 Score =  397 bits (1019), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 207/280 (73%), Positives = 227/280 (81%), Gaps = 39/280 (13%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
           MVLFAAKVYAS++SGSLAIIASTLDSLLDLLSGFILWFTAFS +T NPY+YPIGK+RMQP
Sbjct: 133 MVLFAAKVYASIRSGSLAIIASTLDSLLDLLSGFILWFTAFSKKTSNPYRYPIGKRRMQP 192

Query: 61  LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC 120
           LGILVFASVMATLGLQIILES R+L  + D F LTKEQE+WVV IMLSVT VKLLLVVYC
Sbjct: 193 LGILVFASVMATLGLQIILESTRSLFYDGDTFRLTKEQEKWVVDIMLSVTSVKLLLVVYC 252

Query: 121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVL 180
           R+FTNEI                                       LA+YTIRTWSMTVL
Sbjct: 253 RSFTNEI---------------------------------------LAIYTIRTWSMTVL 273

Query: 181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 240
           ENV+SLVG+SA+PEYLQKLTYLCWNHHK++RHIDTVRAYTFGSHYFVEVDIVLP  MPLQ
Sbjct: 274 ENVHSLVGQSASPEYLQKLTYLCWNHHKAVRHIDTVRAYTFGSHYFVEVDIVLPCDMPLQ 333

Query: 241 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQAH 280
           EAHDIGE+ QEKLE LPEIERAFVHLDYE+TH+PEHA++H
Sbjct: 334 EAHDIGEAPQEKLESLPEIERAFVHLDYEFTHQPEHARSH 373

Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SAJ7|MTP9_ARATH Metal tolerance protein 9 OS=Arabidopsis thaliana GN=MTP9 PE=2 SV=2

 Score =  393 bits (1009), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 193/276 (69%), Positives = 238/276 (86%), Gaps = 1/276 (0%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
           +VLF AKVYASV+S S+A+IASTLDSLLDLLSGFILWFTA +M+TPN ++YPIGK+RMQP
Sbjct: 124 LVLFVAKVYASVESRSMAVIASTLDSLLDLLSGFILWFTANAMRTPNNFRYPIGKRRMQP 183

Query: 61  LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC 120
           +GI+VFASVMATLGLQ+ILES R LVS ++  +++  +E+W++GIM S T+VK LL++YC
Sbjct: 184 VGIIVFASVMATLGLQVILESTRLLVS-KNGSHMSSTEEKWMIGIMASATVVKFLLMLYC 242

Query: 121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVL 180
           R+F NEIV+AYAQDH FDVITN +GL   +LA     W+DP GAI++ALYTI TW+ TVL
Sbjct: 243 RSFQNEIVRAYAQDHLFDVITNSVGLATAVLAVKFYWWIDPSGAILIALYTISTWARTVL 302

Query: 181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 240
           ENV+SL+GRSA P++L KLT+L WNHH+ I+HIDTVRAYTFGSHYFVEVDIVLP  M L 
Sbjct: 303 ENVHSLIGRSAPPDFLAKLTFLIWNHHEKIKHIDTVRAYTFGSHYFVEVDIVLPEDMRLH 362

Query: 241 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEH 276
           EAH+IGE+LQEKLE L E+ERAFVH+D+E+THRPEH
Sbjct: 363 EAHNIGETLQEKLEQLSEVERAFVHIDFEFTHRPEH 398

Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDU0|MTP7_ORYSJ Metal tolerance protein 7 OS=Oryza sativa subsp. japonica GN=MTP7 PE=2 SV=1

 Score =  392 bits (1008), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 192/276 (69%), Positives = 230/276 (83%), Gaps = 1/276 (0%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
           ++LF  KV ASV+S S+A+IASTLDSLLDLLSGFILWFTA +M+ PN Y YPIGK+RMQP
Sbjct: 113 LILFIGKVLASVESLSMAVIASTLDSLLDLLSGFILWFTAHAMKKPNKYSYPIGKRRMQP 172

Query: 61  LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC 120
           +GI+VFASVM TLG Q+++ES R L++NE Q      +E W++G M SV +VK  L++YC
Sbjct: 173 VGIIVFASVMGTLGFQVLIESGRQLITNEHQV-FDHRKELWMIGSMSSVAVVKFFLMLYC 231

Query: 121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVL 180
           R+F NEIV+AYAQDHFFDVITN +GLV+ LLA     WMDPVGAI++A+YTI TW+ TV+
Sbjct: 232 RSFKNEIVRAYAQDHFFDVITNSVGLVSALLAVRYKWWMDPVGAILIAVYTITTWARTVV 291

Query: 181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 240
           ENV +L+GRSA  EYL KLTYL WNHH+ IRHIDTVRAYTFG+HYFVEVDIVLP  MPL 
Sbjct: 292 ENVGTLIGRSAPAEYLTKLTYLIWNHHEEIRHIDTVRAYTFGTHYFVEVDIVLPGDMPLS 351

Query: 241 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEH 276
            AHDIGESLQEKLE LPE+ERAFVH+D+E+THRPEH
Sbjct: 352 HAHDIGESLQEKLEQLPEVERAFVHVDFEFTHRPEH 387

Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q0WU02|MTP10_ARATH Metal tolerance protein 10 OS=Arabidopsis thaliana GN=MTP10 PE=2 SV=1

 Score =  390 bits (1001), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 191/276 (69%), Positives = 236/276 (85%), Gaps = 1/276 (0%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
           +VLF AKVYAS++S S+A+IASTLDSLLDLLSGFILWFTA +M+ PN + YPIGK+RMQP
Sbjct: 151 LVLFVAKVYASMESRSMAVIASTLDSLLDLLSGFILWFTANAMRKPNQFHYPIGKRRMQP 210

Query: 61  LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC 120
           +GI+VFASVMATLGLQ++LES R LV+ +   ++   +E+W++GIM+SVT+VK LL++YC
Sbjct: 211 VGIIVFASVMATLGLQVLLESGRQLVA-KSGIHMNSTEEKWMIGIMVSVTIVKFLLMLYC 269

Query: 121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVL 180
           R F NEIV+AYAQDH FDV+TN IGL   +LA     W+DP GAI++ALYTI TW+ TVL
Sbjct: 270 RGFQNEIVRAYAQDHLFDVVTNSIGLATAVLAVKFYWWIDPTGAILIALYTIATWARTVL 329

Query: 181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 240
           ENV+SL+GRSA P++L KLT+L WNHH+ I+HIDTVRAYTFGSHYFVEVDIVLP  M LQ
Sbjct: 330 ENVHSLIGRSAPPDFLAKLTFLIWNHHEQIKHIDTVRAYTFGSHYFVEVDIVLPEDMRLQ 389

Query: 241 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEH 276
           EAH+IGE+LQEKLE L E+ERAFVH+D+E+THRPEH
Sbjct: 390 EAHNIGETLQEKLEQLAEVERAFVHIDFEFTHRPEH 425

Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q10PP8|MTP4_ORYSJ Metal tolerance protein 4 OS=Oryza sativa subsp. japonica GN=MTP4 PE=2 SV=1

 Score =  350 bits (898), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 168/276 (60%), Positives = 212/276 (76%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
           M+L A K+YA++KSGS+AI ASTLDSLLDL++G ILWFT  SM++ N Y+YPIGK R+QP
Sbjct: 111 MILLALKIYATIKSGSIAIAASTLDSLLDLMAGGILWFTHLSMKSINVYKYPIGKLRVQP 170

Query: 61  LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC 120
           +GI++FA+VMATLG Q+ ++++  L+ NE    LT  Q  W+  IM+  T+VKL L +YC
Sbjct: 171 VGIIIFAAVMATLGFQVFVQAVEKLIVNETPDKLTPVQLTWLYSIMIFATVVKLALWLYC 230

Query: 121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVL 180
           R   N+IV+AYA+DH+FDV+TN++GL A +L +    W+DPVGAI LA+YTI  WS TV 
Sbjct: 231 RTSGNKIVRAYAKDHYFDVVTNVVGLAAAVLGDMFYWWIDPVGAIALAVYTITNWSGTVW 290

Query: 181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 240
           EN  SLVG SA PE LQKLTYL   HH  I+ +DTVRAYTFG  YFVEVDI LP  +PL+
Sbjct: 291 ENAVSLVGESAPPEMLQKLTYLAIRHHPQIKRVDTVRAYTFGVLYFVEVDIELPEELPLK 350

Query: 241 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEH 276
           EAH IGESLQ K+E LPE+ERAFVHLD+E  H+PEH
Sbjct: 351 EAHAIGESLQIKIEELPEVERAFVHLDFECDHKPEH 386

Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9M2P2|MTPC3_ARATH Putative metal tolerance protein C3 OS=Arabidopsis thaliana GN=MTPC3 PE=3 SV=2

 Score =  344 bits (882), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 169/276 (61%), Positives = 213/276 (77%), Gaps = 1/276 (0%)

Query: 3   LFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLG 62
           L A K+YA+VKSGS+AI ASTLDSLLDL++G ILWFT  SM+  N Y+YPIGK R+QP+G
Sbjct: 127 LLALKIYATVKSGSIAIAASTLDSLLDLMAGGILWFTHLSMKNVNIYKYPIGKLRVQPVG 186

Query: 63  ILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRA 122
           I++FA+VMATLG Q++L +   L+SNE    +   Q  W+  IMLS T +KL+L +YC++
Sbjct: 187 IIIFAAVMATLGFQVLLVAAEQLISNEPSEKMNHVQLIWLYSIMLSATAIKLVLWIYCKS 246

Query: 123 FTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVLEN 182
             N IV+AYA+DH FDV+TN++GLVA +LAN    W+DP GAI+LA+YTI  WS TV+EN
Sbjct: 247 SRNHIVRAYAKDHHFDVVTNVLGLVAAVLANAFYWWLDPTGAILLAIYTIVNWSGTVMEN 306

Query: 183 VNSLVGRSAAPEYLQKLTYLCWNH-HKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQE 241
             SL+G+SA PE LQKLTYL       +I+H+DTVRAYTFG  YFVEVDI LP  +PL+E
Sbjct: 307 AVSLIGQSAPPEVLQKLTYLVMRQGGDNIKHVDTVRAYTFGVLYFVEVDIELPEDLPLKE 366

Query: 242 AHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHA 277
           AH IGESLQ KLE LPE+ERAFVHLD+E  H+PEH+
Sbjct: 367 AHAIGESLQIKLEELPEVERAFVHLDFECHHKPEHS 402

Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6Z7K5|MTP3_ORYSJ Metal tolerance protein 3 OS=Oryza sativa subsp. japonica GN=MTP3 PE=2 SV=1

 Score =  338 bits (866), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 159/276 (57%), Positives = 213/276 (77%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
           ++L   KVYA++K+GS+AI ASTLDSLLD L+G IL+FT  +M++ N Y+YPIGK R+QP
Sbjct: 124 IILLVFKVYATIKTGSMAIAASTLDSLLDFLAGGILYFTHLTMKSVNIYKYPIGKLRVQP 183

Query: 61  LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC 120
           +GI+VFA++MATLG Q++++++  LV N+    +T EQ  W+  IMLS T+VKL L +YC
Sbjct: 184 VGIIVFAAIMATLGFQVLIQAIEQLVENKAGEKMTPEQLIWLYSIMLSATVVKLALYIYC 243

Query: 121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVL 180
           R+  N IV+AYA+DH+FDV+TN++GLVA +L +    W+DPVGA++LA+YTI  WS TV 
Sbjct: 244 RSSGNSIVQAYAKDHYFDVVTNVVGLVAAVLGDKFFWWIDPVGAVLLAVYTIVNWSGTVY 303

Query: 181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 240
           EN  +LVG+ A  + LQKLTYL   H   +R +DTVRAY+FG+ YFVEVDI L   M L 
Sbjct: 304 ENAVTLVGQCAPSDMLQKLTYLAMKHDPRVRRVDTVRAYSFGALYFVEVDIELSEDMRLG 363

Query: 241 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEH 276
           EAH IGESLQ+K+E LPE+ERAFVH+D+E TH+PEH
Sbjct: 364 EAHSIGESLQDKIEKLPEVERAFVHVDFESTHKPEH 399

Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|P21559|P34_RICRS Protein p34 OS=Rickettsia rickettsii (strain Sheila Smith) GN=p34 PE=3 SV=1

 Score = 79.3 bits (194), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 132/263 (50%), Gaps = 8/263 (3%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFI-LWFTAFSMQTPNPYQYPIGKKRMQ 59
           +++ + K+YA V + S +I+A+ +DS+LD+ S FI L    F++Q P+ + +  G +++Q
Sbjct: 22  LIILSIKLYAWVVTDSQSILAALIDSMLDITSSFINLIALRFALQPPD-HHHRFGYEKLQ 80

Query: 60  PLGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVY 119
            L I   +         +   S+++L       N++       V I L++ LV     V 
Sbjct: 81  DLTIFSQSIFFFASAFFVGFSSVKSLFEKTKPENISDGTTVMYVCIFLTIILVFYQTYV- 139

Query: 120 CRAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDW-MDPVGAIILALYTIRTWSMT 178
            +   +EIVKA    +F D++TN+I ++++ L++Y   W +DP+  ++++LY   +    
Sbjct: 140 IKKTGSEIVKADKLHYFTDLLTNVIVIISINLSDYF--WFVDPLFGVVISLYIFHSSYSL 197

Query: 179 VLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMP 238
             +   +LV      +  QK+  +  N+H   + +  ++    G   F++  + +  +M 
Sbjct: 198 FKKAFKNLVDHELPEQDRQKIISIV-NNHLGAKGMHEMKTRYAGQKAFIQCHLEMDGNMS 256

Query: 239 LQEAHDIGESLQ-EKLELLPEIE 260
           L  AH I + +  E L+  PE E
Sbjct: 257 LYNAHKISDEIAFEILQEFPEAE 279

Rickettsia rickettsii (strain Sheila Smith) (taxid: 392021)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	281
356568951	396	PREDICTED: metal tolerance protein 5-lik	0.996	0.707	0.917	1e-148
363807471	396	uncharacterized protein LOC100791229 [Gl	0.996	0.707	0.910	1e-147
255585988	394	cation efflux protein/ zinc transporter,	0.996	0.710	0.917	1e-147
357503001	347	Metal tolerance protein [Medicago trunca	0.996	0.806	0.903	1e-146
357502999	400	Metal tolerance protein [Medicago trunca	0.996	0.7	0.903	1e-146
217071804	400	unknown [Medicago truncatula]	0.996	0.7	0.9	1e-145
224109590	394	metal tolerance protein [Populus trichoc	0.996	0.710	0.907	1e-145
225448839	399	PREDICTED: metal tolerance protein 5 iso	0.989	0.696	0.917	1e-144
224100915	394	metal tolerance protein [Populus trichoc	0.996	0.710	0.889	1e-143
115440923	415	Os01g0837800 [Oryza sativa Japonica Grou	0.996	0.674	0.882	1e-140

>gi|356568951|ref|XP_003552671.1| PREDICTED: metal tolerance protein 5-like [Glycine max]

 Score =  529 bits (1363), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 257/280 (91%), Positives = 274/280 (97%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
           MVLF AKVYAS++SGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP
Sbjct: 116 MVLFVAKVYASIRSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 175

Query: 61  LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC 120
           LGILVFASVMATLGLQIILES RTL+S+E+ FNLTKEQE+WVVGIMLSVTLVK LL++YC
Sbjct: 176 LGILVFASVMATLGLQIILESTRTLISSENAFNLTKEQERWVVGIMLSVTLVKFLLMIYC 235

Query: 121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVL 180
           R+FTNEI+KAYAQDHFFDVITNIIGL+A LLANY+DDWMDPVGAIILALYTIRTWSMTVL
Sbjct: 236 RSFTNEIIKAYAQDHFFDVITNIIGLIAALLANYVDDWMDPVGAIILALYTIRTWSMTVL 295

Query: 181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 240
           ENVNSLVGRSAAPEYLQKLTYLCWNHHK++RHIDTVRAYTFGSHYFVEVDIVLP+ MPLQ
Sbjct: 296 ENVNSLVGRSAAPEYLQKLTYLCWNHHKAVRHIDTVRAYTFGSHYFVEVDIVLPSDMPLQ 355

Query: 241 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQAH 280
           EAHDIGESLQEKLELLPEIERAFVHLDYEY+H+PEHAQAH
Sbjct: 356 EAHDIGESLQEKLELLPEIERAFVHLDYEYSHKPEHAQAH 395

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363807471|ref|NP_001242648.1| uncharacterized protein LOC100791229 [Glycine max] gi|255644613|gb|ACU22809.1| unknown [Glycine max]

 Score =  525 bits (1353), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 255/280 (91%), Positives = 273/280 (97%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
           MVLF AKVYASV+SGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP
Sbjct: 116 MVLFVAKVYASVRSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 175

Query: 61  LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC 120
           LGILVFASVMATLGLQIILES RTL+S+E+ FNLT+EQE+WVV IMLSVTLVK LL++YC
Sbjct: 176 LGILVFASVMATLGLQIILESTRTLISSENAFNLTREQERWVVCIMLSVTLVKFLLMIYC 235

Query: 121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVL 180
           R+FTNEI+KAYAQDHFFDVITN+IGL+A LLANY+DDWMDPVGAIILALYTIRTWSMTVL
Sbjct: 236 RSFTNEIIKAYAQDHFFDVITNVIGLIAALLANYVDDWMDPVGAIILALYTIRTWSMTVL 295

Query: 181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 240
           ENVNSLVGRSAAPEYLQKLTYLCWNHHK++RHIDTVRAYTFGSHYFVEVDIVLP+ MPLQ
Sbjct: 296 ENVNSLVGRSAAPEYLQKLTYLCWNHHKAVRHIDTVRAYTFGSHYFVEVDIVLPSDMPLQ 355

Query: 241 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQAH 280
           EAHDIGESLQEKLELLPEIERAFVHLDYEY+H+PEHAQAH
Sbjct: 356 EAHDIGESLQEKLELLPEIERAFVHLDYEYSHKPEHAQAH 395

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585988|ref|XP_002533664.1| cation efflux protein/ zinc transporter, putative [Ricinus communis] gi|223526446|gb|EEF28723.1| cation efflux protein/ zinc transporter, putative [Ricinus communis]

 Score =  525 bits (1353), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 257/280 (91%), Positives = 275/280 (98%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
           MVLFAAKVYASV+SGSLAIIASTLDSLLDLLSGFILWFTAF+MQTPNPYQYPIGKKRMQP
Sbjct: 114 MVLFAAKVYASVRSGSLAIIASTLDSLLDLLSGFILWFTAFTMQTPNPYQYPIGKKRMQP 173

Query: 61  LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC 120
           LGILVFASVMATLGLQIILESLR L+S+E +F LTKEQE+WVVGIMLSVTLVKLLL+VYC
Sbjct: 174 LGILVFASVMATLGLQIILESLRALLSDESEFELTKEQERWVVGIMLSVTLVKLLLMVYC 233

Query: 121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVL 180
           R+FTNEIVKAYAQDHFFDVITNIIGL+A LLANY++DWMDPVGAIILALYTIRTWSMTVL
Sbjct: 234 RSFTNEIVKAYAQDHFFDVITNIIGLIAALLANYMEDWMDPVGAIILALYTIRTWSMTVL 293

Query: 181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 240
           ENVNSLVG+SA P+YL+KLTYLCWNHHK++RHIDTVRAYTFGSHYFVEVDIVLPASMPLQ
Sbjct: 294 ENVNSLVGKSATPDYLKKLTYLCWNHHKAVRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 353

Query: 241 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQAH 280
           EAHDIGESLQEKLELLPEIERAFVHLDYEYTH+PEHAQ+H
Sbjct: 354 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHKPEHAQSH 393

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357503001|ref|XP_003621789.1| Metal tolerance protein [Medicago truncatula] gi|355496804|gb|AES78007.1| Metal tolerance protein [Medicago truncatula]

 Score =  522 bits (1344), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 253/280 (90%), Positives = 271/280 (96%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
           MVLF AKVYASV+SGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP
Sbjct: 67  MVLFTAKVYASVRSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 126

Query: 61  LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC 120
           LGILVFASVMATLGLQIILES RTL+  ++ F+LT+EQE+WVVGIMLSVTLVK +L++YC
Sbjct: 127 LGILVFASVMATLGLQIILESARTLIYTDNTFSLTREQERWVVGIMLSVTLVKFMLMIYC 186

Query: 121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVL 180
           R+FTNEIVKAYAQDHFFDVITN+IGL+A LLANY DDWMDPVGAIILALYTIRTWSMTVL
Sbjct: 187 RSFTNEIVKAYAQDHFFDVITNVIGLIAALLANYFDDWMDPVGAIILALYTIRTWSMTVL 246

Query: 181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 240
           ENVNSLVGRSAAPEYLQKLTYLCWNHHK++RHIDTVRAYTFGSHYFVEVDIVLPA MPLQ
Sbjct: 247 ENVNSLVGRSAAPEYLQKLTYLCWNHHKAVRHIDTVRAYTFGSHYFVEVDIVLPADMPLQ 306

Query: 241 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQAH 280
           EAHDIGESLQEKLELLPEIERAFVHLDYE++H+PEHAQAH
Sbjct: 307 EAHDIGESLQEKLELLPEIERAFVHLDYEFSHKPEHAQAH 346

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357502999|ref|XP_003621788.1| Metal tolerance protein [Medicago truncatula] gi|355496803|gb|AES78006.1| Metal tolerance protein [Medicago truncatula]

 Score =  521 bits (1343), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 253/280 (90%), Positives = 271/280 (96%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
           MVLF AKVYASV+SGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP
Sbjct: 120 MVLFTAKVYASVRSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 179

Query: 61  LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC 120
           LGILVFASVMATLGLQIILES RTL+  ++ F+LT+EQE+WVVGIMLSVTLVK +L++YC
Sbjct: 180 LGILVFASVMATLGLQIILESARTLIYTDNTFSLTREQERWVVGIMLSVTLVKFMLMIYC 239

Query: 121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVL 180
           R+FTNEIVKAYAQDHFFDVITN+IGL+A LLANY DDWMDPVGAIILALYTIRTWSMTVL
Sbjct: 240 RSFTNEIVKAYAQDHFFDVITNVIGLIAALLANYFDDWMDPVGAIILALYTIRTWSMTVL 299

Query: 181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 240
           ENVNSLVGRSAAPEYLQKLTYLCWNHHK++RHIDTVRAYTFGSHYFVEVDIVLPA MPLQ
Sbjct: 300 ENVNSLVGRSAAPEYLQKLTYLCWNHHKAVRHIDTVRAYTFGSHYFVEVDIVLPADMPLQ 359

Query: 241 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQAH 280
           EAHDIGESLQEKLELLPEIERAFVHLDYE++H+PEHAQAH
Sbjct: 360 EAHDIGESLQEKLELLPEIERAFVHLDYEFSHKPEHAQAH 399

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217071804|gb|ACJ84262.1| unknown [Medicago truncatula]

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 252/280 (90%), Positives = 270/280 (96%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
           MVLF AKVYASV+SGSLAIIASTLDSLLDLLSGFILWFT FSMQTPNPYQYPIGKKRMQP
Sbjct: 120 MVLFTAKVYASVRSGSLAIIASTLDSLLDLLSGFILWFTTFSMQTPNPYQYPIGKKRMQP 179

Query: 61  LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC 120
           LGILVFASVMATLGLQIILES RTL+  ++ F+LT+EQE+WVVGIMLSVTLVK +L++YC
Sbjct: 180 LGILVFASVMATLGLQIILESARTLIYTDNTFSLTREQERWVVGIMLSVTLVKFMLMIYC 239

Query: 121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVL 180
           R+FTNEIVKAYAQDHFFDVITN+IGL+A LLANY DDWMDPVGAIILALYTIRTWSMTVL
Sbjct: 240 RSFTNEIVKAYAQDHFFDVITNVIGLIAALLANYFDDWMDPVGAIILALYTIRTWSMTVL 299

Query: 181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 240
           ENVNSLVGRSAAPEYLQKLTYLCWNHHK++RHIDTVRAYTFGSHYFVEVDIVLPA MPLQ
Sbjct: 300 ENVNSLVGRSAAPEYLQKLTYLCWNHHKAVRHIDTVRAYTFGSHYFVEVDIVLPADMPLQ 359

Query: 241 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQAH 280
           EAHDIGESLQEKLELLPEIERAFVHLDYE++H+PEHAQAH
Sbjct: 360 EAHDIGESLQEKLELLPEIERAFVHLDYEFSHKPEHAQAH 399

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109590|ref|XP_002315247.1| metal tolerance protein [Populus trichocarpa] gi|145453064|gb|ABP68858.1| Mn-specific cation diffusion facilitator transporter [Populus trichocarpa] gi|222864287|gb|EEF01418.1| metal tolerance protein [Populus trichocarpa]

 Score =  519 bits (1337), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 254/280 (90%), Positives = 275/280 (98%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
           MVLFAAKVYASV+SGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP
Sbjct: 114 MVLFAAKVYASVRSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 173

Query: 61  LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC 120
           LGILVFASVMATLGLQIILES+R L S+E+ FNL+KEQE+WVVGIMLSVTLVKL+L+VYC
Sbjct: 174 LGILVFASVMATLGLQIILESVRALHSDENDFNLSKEQERWVVGIMLSVTLVKLVLMVYC 233

Query: 121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVL 180
           R+FTNEIVKAYAQDHFFDVITNIIGL+A L+ANY+++WMDPVGAIILALYTIRTWSMTVL
Sbjct: 234 RSFTNEIVKAYAQDHFFDVITNIIGLIAALMANYMEEWMDPVGAIILALYTIRTWSMTVL 293

Query: 181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 240
           ENVNSLVG+SA P+YLQKLTYLCWNHH++IRHIDTVRAYTFGSHYFVEVDIVLP+SMPLQ
Sbjct: 294 ENVNSLVGKSATPDYLQKLTYLCWNHHRAIRHIDTVRAYTFGSHYFVEVDIVLPSSMPLQ 353

Query: 241 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQAH 280
           EAHDIGESLQEKLELLPEIERAFVHLDYEYTH+PEHAQ+H
Sbjct: 354 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHKPEHAQSH 393

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448839|ref|XP_002282508.1| PREDICTED: metal tolerance protein 5 isoform 1 [Vitis vinifera] gi|296086305|emb|CBI31746.3| unnamed protein product [Vitis vinifera]

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 255/278 (91%), Positives = 271/278 (97%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
           M+LFAAKVYASV SGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP
Sbjct: 119 MILFAAKVYASVMSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 178

Query: 61  LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC 120
           LGILVFASVMATLGLQIILES+RTL S+E +F+LT+EQEQWV+GIMLSVTL KL+L VYC
Sbjct: 179 LGILVFASVMATLGLQIILESVRTLSSDEAEFDLTREQEQWVIGIMLSVTLTKLILAVYC 238

Query: 121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVL 180
           RAFTNEIVKAYAQDHFFDVITNIIGL+AVLLANYI DWMDPVGAIILALYTIRTW++TVL
Sbjct: 239 RAFTNEIVKAYAQDHFFDVITNIIGLIAVLLANYISDWMDPVGAIILALYTIRTWTLTVL 298

Query: 181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 240
           ENVNSLVGR+AAPEYLQKLTYLCWNHHK+IRHIDTVRAYTFGSHYFVEVDIVLPA+MPLQ
Sbjct: 299 ENVNSLVGRTAAPEYLQKLTYLCWNHHKAIRHIDTVRAYTFGSHYFVEVDIVLPANMPLQ 358

Query: 241 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQ 278
           EAHDIGESLQ KLELLPEIERAFVHLDYEY+H+PEHAQ
Sbjct: 359 EAHDIGESLQVKLELLPEIERAFVHLDYEYSHKPEHAQ 396

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100915|ref|XP_002312066.1| metal tolerance protein [Populus trichocarpa] gi|145453066|gb|ABP68859.1| Mn-specific cation diffusion facilitator transporter [Populus trichocarpa] gi|222851886|gb|EEE89433.1| metal tolerance protein [Populus trichocarpa]

 Score =  511 bits (1317), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 249/280 (88%), Positives = 271/280 (96%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
           MVLF AK YAS+KSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP
Sbjct: 114 MVLFVAKAYASIKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 173

Query: 61  LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC 120
           LGILVFASVMATLGLQIILES+R L+S+E  F+LTKEQE+W+VGIMLSVTLVKL+L++YC
Sbjct: 174 LGILVFASVMATLGLQIILESVRALLSDESDFDLTKEQERWIVGIMLSVTLVKLVLMIYC 233

Query: 121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVL 180
           R+FT+EIVKAYAQDHFFDVITN IGLVA LLANY++DWMDPVGAI+LALYTIRTWSMTVL
Sbjct: 234 RSFTDEIVKAYAQDHFFDVITNTIGLVAALLANYLEDWMDPVGAIVLALYTIRTWSMTVL 293

Query: 181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 240
           ENVNSLVG+SA P+YLQKLTYLCWNHHK+IRHIDTVRAYTFGSHYFVEVDIVLP+SMPLQ
Sbjct: 294 ENVNSLVGKSATPDYLQKLTYLCWNHHKAIRHIDTVRAYTFGSHYFVEVDIVLPSSMPLQ 353

Query: 241 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQAH 280
           EAHDIGESLQEKLELLPEIERAFVHLDYEYTH+PEHA++ 
Sbjct: 354 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHKPEHARSR 393

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115440923|ref|NP_001044741.1| Os01g0837800 [Oryza sativa Japonica Group] gi|75251145|sp|Q5NA18.1|MTP5_ORYSJ RecName: Full=Metal tolerance protein 5; Short=OsMTP5 gi|56784641|dbj|BAD81688.1| putative cation diffusion facilitator 9 [Oryza sativa Japonica Group] gi|113534272|dbj|BAF06655.1| Os01g0837800 [Oryza sativa Japonica Group] gi|125528310|gb|EAY76424.1| hypothetical protein OsI_04357 [Oryza sativa Indica Group] gi|125572569|gb|EAZ14084.1| hypothetical protein OsJ_04008 [Oryza sativa Japonica Group]

 Score =  502 bits (1293), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 247/280 (88%), Positives = 271/280 (96%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
           MVLFAAKVYASV+SGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPY+YPIGKKRMQP
Sbjct: 134 MVLFAAKVYASVRSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYRYPIGKKRMQP 193

Query: 61  LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC 120
           LGILVFASVMATLGLQIILES+R+L+S+ D+F+LTKEQE+WVV IML+VTLVKL LV+YC
Sbjct: 194 LGILVFASVMATLGLQIILESVRSLLSDGDEFSLTKEQEKWVVDIMLAVTLVKLALVLYC 253

Query: 121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVL 180
           R FTNEIVKAYAQDHFFDVITN+IGLVA LLA YI+ W+DPVGAIILA+YTIRTWSMTVL
Sbjct: 254 RTFTNEIVKAYAQDHFFDVITNMIGLVAALLATYIEGWIDPVGAIILAIYTIRTWSMTVL 313

Query: 181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 240
           ENV+SLVG+SA+PEYLQKLTYLCWNHHK++RHIDTVRAYTFGSHYFVEVDIVLP+SMPLQ
Sbjct: 314 ENVHSLVGQSASPEYLQKLTYLCWNHHKAVRHIDTVRAYTFGSHYFVEVDIVLPSSMPLQ 373

Query: 241 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQAH 280
           EAHDIGE+LQEKLE LPEIERAFVHLDYE+THRPEHA +H
Sbjct: 374 EAHDIGEALQEKLERLPEIERAFVHLDYEFTHRPEHALSH 413

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	281
TAIR|locus:2039697	394	MTP11 [Arabidopsis thaliana (t	0.996	0.710	0.842	5.5e-125
TAIR|locus:2032830	428	AT1G16310 [Arabidopsis thalian	0.978	0.642	0.634	1.3e-93
TAIR|locus:2095873	411	AT3G58060 [Arabidopsis thalian	0.978	0.669	0.565	1.1e-78
DICTYBASE|DDB_G0285541	434	DDB_G0285541 "putative cation	0.989	0.640	0.412	1.7e-57
WB|WBGene00019841	489	R02F11.3 [Caenorhabditis elega	0.975	0.560	0.366	4.8e-46
WB|WBGene00018948	446	F56C9.3 [Caenorhabditis elegan	0.459	0.289	0.462	1.8e-44
ASPGD|ASPL0000076507	558	AN5049 [Emericella nidulans (t	0.967	0.487	0.359	5.7e-43
UNIPROTKB|G4MRQ3	561	MGG_04623 "Cation efflux famil	0.971	0.486	0.326	7e-38
WB|WBGene00019803	341	PDB1.1 [Caenorhabditis elegans	0.939	0.774	0.328	8.9e-38
ASPGD|ASPL0000052398	401	AN10155 [Emericella nidulans (	0.960	0.673	0.322	3.5e-36

TAIR|locus:2039697 MTP11 [Arabidopsis thaliana (taxid:3702)]

 Score = 1228 (437.3 bits), Expect = 5.5e-125, P = 5.5e-125
 Identities = 236/280 (84%), Positives = 250/280 (89%)

Query:     1 MVLFAAKVYASVKSGSLAIIASTXXXXXXXXXGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
             M+LFAAKVYASV SGSLAIIAST         GFILWFTAFSMQTPNPYQYPIGKKRMQP
Sbjct:   114 MLLFAAKVYASVTSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQP 173

Query:    61 LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMXXXXXXXXXXXXYC 120
             LGILVFASVMATLGLQIILESLRT++S+  +FNLTKEQE WVVGIM            YC
Sbjct:   174 LGILVFASVMATLGLQIILESLRTMLSSHKEFNLTKEQESWVVGIMLSVTLVKLLLVLYC 233

Query:   121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVL 180
             R+FTNEIVKAYAQDHFFDVITNIIGL+AV+LANYID W+DPVGAIILALYTIRTWSMTVL
Sbjct:   234 RSFTNEIVKAYAQDHFFDVITNIIGLIAVILANYIDYWIDPVGAIILALYTIRTWSMTVL 293

Query:   181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 240
             ENVNSLVG+SA PEYLQKLTYLCWNHHK+IRHIDTVRAYTFGSHYFVEVDIVLPA MPLQ
Sbjct:   294 ENVNSLVGKSARPEYLQKLTYLCWNHHKAIRHIDTVRAYTFGSHYFVEVDIVLPADMPLQ 353

Query:   241 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQAH 280
              AHDIGESLQEKLELL EIERAFVHLDYEYTH+PEHA++H
Sbjct:   354 VAHDIGESLQEKLELLEEIERAFVHLDYEYTHKPEHARSH 393

GO:0005634 "nucleus" evidence=ISM

GO:0006812 "cation transport" evidence=IEA;ISS

GO:0008324 "cation transmembrane transporter activity" evidence=IEA;ISS

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0005384 "manganese ion transmembrane transporter activity" evidence=IGI;IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0010042 "response to manganese ion" evidence=IGI;IDA;IMP

GO:0030026 "cellular manganese ion homeostasis" evidence=IMP

GO:0005770 "late endosome" evidence=IDA

GO:0010486 "manganese:hydrogen antiporter activity" evidence=IDA

GO:0046688 "response to copper ion" evidence=IDA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

TAIR|locus:2032830 AT1G16310 [Arabidopsis thaliana (taxid:3702)]

 Score = 932 (333.1 bits), Expect = 1.3e-93, P = 1.3e-93
 Identities = 175/276 (63%), Positives = 215/276 (77%)

Query:     1 MVLFAAKVYASVKSGSLAIIASTXXXXXXXXXGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
             +VLF AKVYAS++S S+A+IAST         GFILWFTA +M+ PN + YPIGK+RMQP
Sbjct:   151 LVLFVAKVYASMESRSMAVIASTLDSLLDLLSGFILWFTANAMRKPNQFHYPIGKRRMQP 210

Query:    61 LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMXXXXXXXXXXXXYC 120
             +GI+VFASVMATLGLQ++LES R LV+     ++   +E+W++GIM            YC
Sbjct:   211 VGIIVFASVMATLGLQVLLESGRQLVAKSG-IHMNSTEEKWMIGIMVSVTIVKFLLMLYC 269

Query:   121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVL 180
             R F NEIV+AYAQDH FDV+TN IGL   +LA     W+DP GAI++ALYTI TW+ TVL
Sbjct:   270 RGFQNEIVRAYAQDHLFDVVTNSIGLATAVLAVKFYWWIDPTGAILIALYTIATWARTVL 329

Query:   181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQ 240
             ENV+SL+GRSA P++L KLT+L WNHH+ I+HIDTVRAYTFGSHYFVEVDIVLP  M LQ
Sbjct:   330 ENVHSLIGRSAPPDFLAKLTFLIWNHHEQIKHIDTVRAYTFGSHYFVEVDIVLPEDMRLQ 389

Query:   241 EAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEH 276
             EAH+IGE+LQEKLE L E+ERAFVH+D+E+THRPEH
Sbjct:   390 EAHNIGETLQEKLEQLAEVERAFVHIDFEFTHRPEH 425

GO:0006812 "cation transport" evidence=IEA;ISS

GO:0008324 "cation transmembrane transporter activity" evidence=IEA;ISS

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

TAIR|locus:2095873 AT3G58060 [Arabidopsis thaliana (taxid:3702)]

 Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
 Identities = 156/276 (56%), Positives = 195/276 (70%)

Query:     3 LFAAKVYASVKSGSLAIIASTXXXXXXXXXGFILWFTAFSMQTPNPYQYPIGKKRMQPLG 62
             L A K+YA+VKSGS+AI AST         G ILWFT  SM+  N Y+YPIGK R+QP+G
Sbjct:   127 LLALKIYATVKSGSIAIAASTLDSLLDLMAGGILWFTHLSMKNVNIYKYPIGKLRVQPVG 186

Query:    63 ILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMXXXXXXXXXXXXYCRA 122
             I++FA+VMATLG Q++L +   L+SNE    +   Q  W+  IM            YC++
Sbjct:   187 IIIFAAVMATLGFQVLLVAAEQLISNEPSEKMNHVQLIWLYSIMLSATAIKLVLWIYCKS 246

Query:   123 FTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVLEN 182
               N IV+AYA+DH FDV+TN++GLVA +LAN    W+DP GAI+LA+YTI  WS TV+EN
Sbjct:   247 SRNHIVRAYAKDHHFDVVTNVLGLVAAVLANAFYWWLDPTGAILLAIYTIVNWSGTVMEN 306

Query:   183 VNSLVGRSAAPEYLQKLTYLCWNHH-KSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQE 241
               SL+G+SA PE LQKLTYL       +I+H+DTVRAYTFG  YFVEVDI LP  +PL+E
Sbjct:   307 AVSLIGQSAPPEVLQKLTYLVMRQGGDNIKHVDTVRAYTFGVLYFVEVDIELPEDLPLKE 366

Query:   242 AHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHA 277
             AH IGESLQ KLE LPE+ERAFVHLD+E  H+PEH+
Sbjct:   367 AHAIGESLQIKLEELPEVERAFVHLDFECHHKPEHS 402

GO:0005634 "nucleus" evidence=ISM

GO:0006812 "cation transport" evidence=IEA;ISS

GO:0008324 "cation transmembrane transporter activity" evidence=IEA;ISS

GO:0015562 "efflux transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

DICTYBASE|DDB_G0285541 DDB_G0285541 "putative cation efflux pump" [Dictyostelium discoideum (taxid:44689)]

 Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
 Identities = 116/281 (41%), Positives = 175/281 (62%)

Query:     2 VLFAAKVYASVKSGSLAIIASTXXXXXXXXXGFILWFTAFSMQTPNPYQYPIGKKRMQPL 61
             +LF  ++ A+  +GS A+IA++         GFIL+ T    +  N   YP GK RM+P+
Sbjct:   155 LLFCLQISAAFVTGSRALIATSVDAFMDLLSGFILFMTDRYRKKKNFILYPTGKSRMEPI 214

Query:    62 GILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMXXXXXXXXXXXXYCR 121
             GI++FAS+MAT+ L ++ E +  L+S  +   +T   +  +  ++            YCR
Sbjct:   215 GIIIFASLMATVSLNLLYEGVSKLISRPEDPEITLSTKILMYSLVGLAILIKVAMFLYCR 274

Query:   122 AFTNEIVKAY-AQDHFFDVITNIIGL-VAVLLANYIDDWMDPVGAIILALYTIRTWSMTV 179
               T+       A DH  D++ N  G+ +A+L  N++  W+DP GAI++AL  +R+W+   
Sbjct:   275 RLTHSSSSMILATDHRNDIVVNSFGVGMAILGQNWVW-WLDPSGAIVVALIILRSWTSEA 333

Query:   180 LENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPL 239
              E +  LVG+SA+PE+LQKLT++   HH  +  +DT RA+  G++ +VEVDIVLP SMPL
Sbjct:   334 YEQIQLLVGKSASPEFLQKLTFIALTHHPEVLKVDTCRAFHVGNNLYVEVDIVLPPSMPL 393

Query:   240 QEAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQAH 280
              + HDIGESLQEKLE L +++RAFVH+DYEY H+PEH + H
Sbjct:   394 VQTHDIGESLQEKLESLSDVDRAFVHVDYEYKHKPEHKRVH 434

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

WB|WBGene00019841 R02F11.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
 Identities = 104/284 (36%), Positives = 161/284 (56%)

Query:     2 VLFAAKVYASVKSGSLAIIASTXXXXXXXXXGFILWFTAFSMQTPNPYQYPIGKKRMQPL 61
             +L  AKV ASV SGS++II+S          G ++  +   ++  +PY YP G+ R++PL
Sbjct:   204 LLMIAKVVASVLSGSMSIISSMVDSVVDITSGLVISLSERMIKKRDPYLYPRGRTRLEPL 263

Query:    62 GILVFASVMATLGLQIILESLRTLVSNEDQFNLT---KEQEQWV----VGIMXXXXXXXX 114
              +++ + +M    +Q+I+ S+R  + +  QF+L    +E +  V    V IM        
Sbjct:   264 SLILISVIMGMASIQLIIASVRG-IHDGIQFHLYGIGEEPKLNVTITSVVIMVSTVLVKL 322

Query:   115 XXXXYCRAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRT 174
                 +C+ +    V   A DH  D I+N + L+   L      + DP GAI++++Y + T
Sbjct:   323 SLYLFCKRYKEPSVNVLAMDHRNDCISNTVALICAWLGTKYSYYFDPAGAIVVSMYILYT 382

Query:   175 WSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLP 234
             W  T  E++  L G++A PE++ ++  +C +H   I HIDTV  Y FGS + VEV IVL 
Sbjct:   383 WVQTGREHLAKLSGKTAEPEFINRIIKVCLDHDARISHIDTVYVYHFGSKFLVEVHIVLD 442

Query:   235 ASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYTHRP--EH 276
              +M L+E+HDI E+LQ  +E LPE+ERAFVH DY+Y H P  EH
Sbjct:   443 ENMILKESHDISETLQSNIESLPEVERAFVHTDYDYDHHPHDEH 486

GO:0006812 "cation transport" evidence=IEA

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

WB|WBGene00018948 F56C9.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 297 (109.6 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
 Identities = 61/132 (46%), Positives = 82/132 (62%)

Query:   148 AVLLANYID-DWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNH 206
             AV+     D  ++DP GAI++++Y + TW  T   +   L G+SA PE + ++ + C  H
Sbjct:   312 AVVFEKQFDLYYLDPAGAILVSVYILYTWIRTGYAHFVMLSGKSAHPELINRIVHQCIEH 371

Query:   207 HKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHL 266
                I HIDTV  Y +G+ + VEV IVL  +M L+  HDI ESLQ  +E LPEIERAFVH 
Sbjct:   372 DPRITHIDTVYVYHYGTKFLVEVHIVLDQNMSLKVTHDIAESLQTGIESLPEIERAFVHC 431

Query:   267 DYEYTHRP--EH 276
             DYE+ H P  EH
Sbjct:   432 DYEFEHHPHDEH 443

GO:0006812 "cation transport" evidence=IEA

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

ASPGD|ASPL0000076507 AN5049 [Emericella nidulans (taxid:162425)]

 Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
 Identities = 100/278 (35%), Positives = 154/278 (55%)

Query:     1 MVLFAAKVYASVKSGSLAIIASTXXXXXXXXXGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
             ++L AAK+ A + + S++++AS            I+W T   ++  + Y+YPI ++R++P
Sbjct:   279 VILLAAKIAALLMTNSVSVLASLVDGALDFLSTTIVWITTALIRRQDRYEYPISRRRLEP 338

Query:    61 LGILVFASVMATLGLQIILESLRTLVSNEDQ-FNLTKEQEQWVVGIMXXXXXXXXXXXXY 119
             L +LVFA VM T   Q+ + S   L+S+E     L+         IM            +
Sbjct:   339 LSVLVFAVVMVTSFFQVAITSAGRLISSEHAVIQLSVPS----AAIMGSTVVVKFLCWFW 394

Query:   120 CRAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDW-MDPVGAIILALYTIRTWSMT 178
             CR   N  V+A AQD   DV+ N   +V  L+  + + W +DP+G +IL++Y I  WS T
Sbjct:   395 CRLINNSSVQALAQDAMTDVVFNFFSIVFPLVGGFTNIWFLDPLGGLILSIYIIWNWSRT 454

Query:   179 VLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMP 238
               E++  L G +A+ E +  L Y+     +SI  I  +RAY  G    VEVDIVLP +  
Sbjct:   455 ASEHIRHLTGAAASREDVSILLYMTMRFSRSILKIQNLRAYYAGDLLNVEVDIVLPDNSS 514

Query:   239 LQEAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEH 276
             L+++HD+GESLQ  LE +P +ERAFVH+DY+  + P H
Sbjct:   515 LRDSHDLGESLQYMLESVPTVERAFVHMDYDPWNIPSH 552

GO:0055085 "transmembrane transport" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

UNIPROTKB|G4MRQ3 MGG_04623 "Cation efflux family protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 91/279 (32%), Positives = 149/279 (53%)

Query:     2 VLFAAKVYASVKSGSLAIIASTXXXXXXXXXGFILWFTAFSMQTPNPYQYPIGKKRMQPL 61
             +L A K+   V   S++++AS            I+W T +++   + Y+YP+G++R++P+
Sbjct:   284 ILLAGKIAVIVTVPSVSVLASLVDAALDFLSTAIVWVTTWTITQQDQYRYPVGRRRLEPI 343

Query:    62 GILVFASVMATLGLQIILESLRTLVSNEDQ-FNLTKEQEQWVVGIMXXXXXXXXXXXXYC 120
             G+LVF+ +M T   Q+ LE++  L+S + +  +L        + IM            +C
Sbjct:   344 GVLVFSIIMCTAFCQVALEAITRLMSGDHEVISLGIP----AIAIMFSTIVIKGMCWLWC 399

Query:   121 RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDW-MDPVGAIILALYTIRTWSMTV 179
             R   N  V+A A D   DVI N   +   +  +++  W +D +G ++L+L  I  WS   
Sbjct:   400 RLVKNSSVQALAADALTDVIFNAGSIAFPIAGSFLKIWWLDALGGLLLSLVVIINWSSNA 459

Query:   180 LENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPL 239
              E++ +L G SA  +    L YL     K+I+ I  ++AY  G    VEVDIVL AS  L
Sbjct:   460 GEHIKNLAGFSATADQRNILLYLTMRFAKTIKQIQGLQAYHSGDKLTVEVDIVLDASTSL 519

Query:   240 QEAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQ 278
             +++HD+ ESLQ  +E +P ++RAFVH DY   + P H Q
Sbjct:   520 KDSHDLAESLQYVIESVPIVDRAFVHTDYATYNLPTHMQ 558

GO:0043581 "mycelium development" evidence=IEP

WB|WBGene00019803 PDB1.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 88/268 (32%), Positives = 142/268 (52%)

Query:     3 LFAAKVYASVKSGSLAIIASTXXXXXXXXXGFILWFTAFSMQTPNPYQYPIGKKRMQPLG 62
             L  AK   +  SGSLAI+AS          G ++W+  + ++  N  QYP+G ++++PL 
Sbjct:    72 LIIAKSIVAYFSGSLAILASVVDSFMDITSGVVVWYACYKIEKMNKEQYPVGMRKLEPLT 131

Query:    63 ILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMXXXXXXXXXXXXYCRA 122
             +++   +M      I+LE   T+ + ED+ +   +    +V  +             CR 
Sbjct:   132 VVIVGMIMLFANF-IVLERA-TVQTIEDKLDPRVDLTTLIV--LCTGTATKFCLFMICRV 187

Query:   123 FTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVLEN 182
               +      A D   D +TNI+ L+   +      + DP+GA +++ + I TW +T+ E+
Sbjct:   188 RKSAACLVLAIDQRNDCLTNIVALLGAWIGQNWWKYADPLGAFMVSGFIIVTWFLTIREH 247

Query:   183 VNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEA 242
             +  L+GR A  E++ ++T +  NH + I+ +DTV  Y FG  + VEV  V     PLQ A
Sbjct:   248 IPYLIGRRADQEFINRITNISINHDQRIKALDTVHVYHFGEKFLVEVHAVFDEPAPLQMA 307

Query:   243 HDIGESLQEKLELLPEIERAFVHLDYEY 270
             HD+ ESLQ KLE LP +ERAFVH DY++
Sbjct:   308 HDVAESLQVKLEKLPFVERAFVHCDYKF 335

GO:0006812 "cation transport" evidence=IEA

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

ASPGD|ASPL0000052398 AN10155 [Emericella nidulans (taxid:162425)]

 Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
 Identities = 91/282 (32%), Positives = 144/282 (51%)

Query:     1 MVLFAAKVYASVKSGSLAIIASTXXXXXXXXXGFILWFTAFSMQTPNPYQYPIGKKRMQP 60
             + L   ++Y ++ S SL++  +             L     ++   +P ++P GK R++ 
Sbjct:   120 VALSILQLYGAIASSSLSLFTTMADSVFDPLSNLTLLLCNKTVNRVDPRKFPAGKARIET 179

Query:    61 LGILVFASVMATLGLQIILESLRTLVSNEDQ----FNLTKEQEQWVVGIMXXXXXXXXXX 116
              G + F  +M  + L +I  S+R LV   D     F+L       V+ ++          
Sbjct:   180 AGNICFCFLMTAVSLLLIAFSIRDLVGGSDSETGDFHLPS-----VIAVVVAFCTKFSLF 234

Query:   117 XXYCRAFTNEI--VKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRT 174
               YC A  N++  ++   +DH  D++ N  G++  +  + +  W+DP+GAIIL++     
Sbjct:   235 L-YCFALRNQVSQIRILWEDHRNDLLINGFGILTSVGGSKLRWWIDPMGAIILSVLISGL 293

Query:   175 WSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLP 234
             W  T       L+G +A  +  Q +TY+   H   I  IDTVRAYT G    VEVDIV+ 
Sbjct:   294 WLHTAYHEFQLLIGITADTKMQQLITYISMTHSPLITAIDTVRAYTSGPRLVVEVDIVMD 353

Query:   235 ASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEH 276
              S  L+  HD+ E LQ KLE LP++ERA+VH+DYE TH+PEH
Sbjct:   354 PSDSLRATHDVAEELQTKLESLPDVERAYVHVDYETTHKPEH 395

GO:0055085 "transmembrane transport" evidence=IEA

GO:0006812 "cation transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0008324 "cation transmembrane transporter activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5NA18	MTP5_ORYSJ	No assigned EC number	0.8821	0.9964	0.6746	yes	no
O80632	MTP11_ARATH	No assigned EC number	0.9142	0.9964	0.7106	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00029533001 SubName- Full=Chromosome chr13 scaffold_48, whole genome shotgun sequence; (363 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	281
pfam01545	273	pfam01545, Cation_efflux, Cation efflux family	1e-40
COG0053	304	COG0053, MMT1, Predicted Co/Zn/Cd cation transport	2e-37
TIGR01297	268	TIGR01297, CDF, cation diffusion facilitator famil	7e-23
PRK09509	299	PRK09509, fieF, ferrous iron efflux protein F; Rev	1e-06
COG3965	314	COG3965, COG3965, Predicted Co/Zn/Cd cation transp	1e-05
COG1230	296	COG1230, CzcD, Co/Zn/Cd efflux system component [I	2e-05

>gnl|CDD|216561 pfam01545, Cation_efflux, Cation efflux family

 Score =  141 bits (357), Expect = 1e-40
 Identities = 69/279 (24%), Positives = 135/279 (48%), Gaps = 15/279 (5%)

Query: 2   VLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPL 61
           +L   K+ A + +GSLA++A  L SL+DLLS  +          P   ++P G  R++PL
Sbjct: 1   LLALVKLAAGLLTGSLALLADALHSLIDLLSSLLALLALRLSSRPPDKRHPFGHGRLEPL 60

Query: 62  GILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCR 121
             L+ + ++  +G+ I+ ES+  L+S E+           ++ + L   +V LLL +Y R
Sbjct: 61  AALIVSLLLLGVGVFILYESIERLISPEEIEPG------GILLVALISLVVNLLLALYLR 114

Query: 122 ------AFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDD-WMDPVGAIILALYTIRT 174
                    +  ++A A     DV+ ++  L+ +LL         DP+ ++++AL  + T
Sbjct: 115 RAGRKIGKKSSALRADALHALVDVLGSLAVLIGLLLILLTGLPIADPLASLLIALLILYT 174

Query: 175 WSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLP 234
               + E+++ L+G S  PE + ++          +  +  +R +  G  YFV++ I + 
Sbjct: 175 GLRLLKESLSELLGASPDPELVDEIRDAL-EKLPGVLGVHDLRVWKSGPKYFVDIHIEVD 233

Query: 235 ASMPLQEAHDIGESLQEKL-ELLPEIERAFVHLDYEYTH 272
             + ++EAH+I + ++  L E  P I    +H++     
Sbjct: 234 PDLTVEEAHEIADEIERALKEKFPGIADVTIHVEPAPEV 272

Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt. These proteins are thought to be efflux pumps that remove these ions from cells. Length = 273

>gnl|CDD|223131 COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]

 Score =  133 bits (338), Expect = 2e-37
 Identities = 67/273 (24%), Positives = 142/273 (52%), Gaps = 13/273 (4%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFT-AFSMQTPNPYQYPIGKKRMQ 59
           + L   K+ A + +GS+A++A  + SL D+++  I+      S + P+   +P G  + +
Sbjct: 23  LALALLKLIAGILTGSVALLADAIHSLSDIVASLIVLIGLRISSKPPD-RDHPYGHGKAE 81

Query: 60  PLGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVY 119
            L  L+ + ++   G +I+LE+++ L+S +       E     +G+ L   ++K  L  Y
Sbjct: 82  TLASLIVSILIFAAGFEILLEAIKRLISPQ-----PVEPPLLALGVALISIVIKEALYRY 136

Query: 120 CR----AFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTW 175
            R       ++ + A A  H  DV+T++  LV +L +     W+DP+ A++++LY ++T 
Sbjct: 137 LRRVGKKTNSQALIADALHHRSDVLTSLAVLVGLLGSLLGWPWLDPLAALLISLYILKTG 196

Query: 176 SMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPA 235
                E+VN L+  +  PE L+K+  +  +       +  +R    GS  F++V I +  
Sbjct: 197 FRLFKESVNELMDAALDPEDLEKIRAIILSVPGVKG-VHDLRTRKSGSRIFIDVHIEVDP 255

Query: 236 SMPLQEAHDIGESLQEKL-ELLPEIERAFVHLD 267
            + L+EAH+I + +++++ +  P++    +H++
Sbjct: 256 DLSLEEAHEIADEVEKRIKKEFPKVADVTIHVE 288

Length = 304

>gnl|CDD|233348 TIGR01297, CDF, cation diffusion facilitator family transporter

 Score = 94.2 bits (235), Expect = 7e-23
 Identities = 62/281 (22%), Positives = 128/281 (45%), Gaps = 26/281 (9%)

Query: 2   VLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPL 61
           +L   K+   + SGSLA++A  + SL D+ +  I        + P   ++P G  R + L
Sbjct: 1   LLMLIKIVGGLLSGSLALLADAIHSLSDVAASAIALLALRISRRPADERHPFGHGRAEIL 60

Query: 62  GILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCR 121
             L+    +  + L I+ E++  L++ E +          ++ + +   +V L+L +Y  
Sbjct: 61  AALLNGLFLVVVALFILYEAIERLINPEPE-----IDGGTMLIVAIVGLIVNLILALYLH 115

Query: 122 AFT----NEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSM 177
                  +  ++A A     D ++++  L+  LL  +   W DP+ A++++L  +   + 
Sbjct: 116 RVGHRLGSLALRAAALHVLSDALSSVGVLIGALLIYFGWHWADPIAALLISLLILY-TAF 174

Query: 178 TVL-ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTF-------GSHYFVEV 229
            +L E++N L+  +   E L+++        K+I  I  V+               F++V
Sbjct: 175 RLLKESINVLLDAAPDEEDLEEIK-------KAILSIPGVKGVHDLHIWRIGPGKLFLDV 227

Query: 230 DIVLPASMPLQEAHDIG-ESLQEKLELLPEIERAFVHLDYE 269
            +V+   + L++AHDI  E  +E L+  P IE   + ++  
Sbjct: 228 HVVVDPDLDLKQAHDIALEIEREILKRHPGIEHVTIQVEPC 268

This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence [Transport and binding proteins, Cations and iron carrying compounds]. Length = 268

>gnl|CDD|181919 PRK09509, fieF, ferrous iron efflux protein F; Reviewed

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 57/257 (22%), Positives = 120/257 (46%), Gaps = 12/257 (4%)

Query: 2   VLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFI-LWFTAFSMQTPNPYQYPIGKKRMQP 60
           +L   K++A   +GS++++A+ +DSL+D+ +    L    +S+Q P   ++  G  + + 
Sbjct: 22  LLLLIKIFAWWYTGSVSLLAALVDSLVDIAASLTNLLVVRYSLQ-PADDEHTFGHGKAES 80

Query: 61  LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC 120
           L  L  +  ++   L + L  ++ L+S     +        V  + L  TL+   LV + 
Sbjct: 81  LAALAQSMFISGSALFLFLTGIQHLISPTPMND--PGVGIIVTLVALICTLI---LVTFQ 135

Query: 121 RAFTNEI-VKAYAQD--HF-FDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWS 176
           R    +   +A   D  H+  DV+ N   L+A+ L+ Y     D + A+ + +Y + +  
Sbjct: 136 RWVVRKTQSQAVRADMLHYQSDVMMNGAILLALGLSWYGWHRADALFALGIGIYILYSAL 195

Query: 177 MTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPAS 236
               E V SL+ R+   E  Q++  +  +    +     +R    G   F+++ + +  +
Sbjct: 196 RMGYEAVQSLLDRALPDEERQEIIDIVTS-WPGVSGAHDLRTRQSGPTRFIQLHLEMEDN 254

Query: 237 MPLQEAHDIGESLQEKL 253
           +PL +AH I + +++ L
Sbjct: 255 LPLVQAHMIADQVEQAL 271

Length = 299

>gnl|CDD|226474 COG3965, COG3965, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 42/256 (16%), Positives = 88/256 (34%), Gaps = 40/256 (15%)

Query: 14  SGSLAIIASTLDSLLDL-LSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMAT 72
           SGS++II   + SL+D  ++   L  +    + P   ++P G   ++PL + +  +++A 
Sbjct: 43  SGSMSIIFDGVYSLIDAGMTLLSLLVSRLIAKDPRDARFPYGFWHLEPLVLAINGTLLAL 102

Query: 73  LGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVY----CRAFTNEIV 128
           L L  ++ +L +L+    +           +   L        +        R   + ++
Sbjct: 103 LCLYALINALGSLLDGGREVEPG-----HAIAYTLVSVTGCAAIAWKLRRLNRRLKSPLI 157

Query: 129 KAYAQDHFFDVITNIIGLVAVLLANYID----DWM----DPVGAIILALYTIRTWSMTVL 180
               +        +    VA   A  +       +    DP+   ++ L  I     TV 
Sbjct: 158 ALDTKQWLMSTCLSAALFVAFAAAWLLAGTKFAHLVVYADPMVLALVCLVFIPLPLGTVK 217

Query: 181 ENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHID-TVRAYTFGSHY----------FVEV 229
             +  ++     P  LQ+             H    V  Y F S++          F+E+
Sbjct: 218 SALREIL--LMTPNELQQ---------SIESHAHEIVEKYGFPSYHVYVARVGRGLFIEI 266

Query: 230 DIVLPASMPLQEAHDI 245
             ++P     +   D 
Sbjct: 267 HFIIPRESDARNVEDW 282

Length = 314

>gnl|CDD|224151 COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 51/283 (18%), Positives = 114/283 (40%), Gaps = 34/283 (12%)

Query: 1   MVLFAAKVYASVKSGSLAIIASTLDSLLDLLS-GFILWFTAFSMQTPNPYQYPIGKKRMQ 59
           +     ++   + +GSLA++A  L  L D L+    L     + +     ++  G KR++
Sbjct: 32  LAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIKLARRPATK-RFTFGYKRLE 90

Query: 60  PLGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIM---LSVTLVKLLL 116
            L   + A ++  + L I+ E+++ L                ++ +    L V LV  LL
Sbjct: 91  ILAAFLNALLLIVVSLLILWEAIQRL------LAPPPIHYSGMLVVAIIGLVVNLVSALL 144

Query: 117 VVYCRAFTNEIVKAYAQDHFF-DVITNIIGLVAVLLANYID-DWMDPVGAIILALYTI-R 173
           +         +  AY   H   D + ++  ++A ++  +    W+DP+ +I++AL  +  
Sbjct: 145 LHKGHEENLNMRGAYL--HVLGDALGSVGVIIAAIVIRFTGWSWLDPILSIVIALLILSS 202

Query: 174 TWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYT-------FGSHYF 226
            W +   E++N L+        + K+        +++  I  V +          G  + 
Sbjct: 203 AWPLLK-ESLNILLEGVPEGIDIDKV-------REALLRIPGVASVHDLHVWSITGGEHA 254

Query: 227 VEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYE 269
           + + +V+     + +A    + +  +L     IE   + L+ E
Sbjct: 255 LTLHVVVD---EVADADAALDQIVRRLLEKYGIEHVTIQLETE 294

Length = 296

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	281
COG0053	304	MMT1 Predicted Co/Zn/Cd cation transporters [Inorg	100.0
PRK09509	299	fieF ferrous iron efflux protein F; Reviewed	100.0
PRK03557	312	zinc transporter ZitB; Provisional	100.0
TIGR01297	268	CDF cation diffusion facilitator family transporte	100.0
COG1230	296	CzcD Co/Zn/Cd efflux system component [Inorganic i	100.0
PF01545	284	Cation_efflux: Cation efflux family; InterPro: IPR	100.0
KOG1485	412	consensus Mitochondrial Fe2+ transporter MMT1 and	100.0
KOG1484	354	consensus Putative Zn2+ transporter MSC2 (cation d	100.0
KOG1483	404	consensus Zn2+ transporter ZNT1 and related Cd2+/Z	100.0
KOG1482	379	consensus Zn2+ transporter [Inorganic ion transpor	100.0
COG3965	314	Predicted Co/Zn/Cd cation transporters [Inorganic	99.98
KOG2802	503	consensus Membrane protein HUEL (cation efflux sup	99.74
COG0053	304	MMT1 Predicted Co/Zn/Cd cation transporters [Inorg	98.09
TIGR01297	268	CDF cation diffusion facilitator family transporte	97.81
PRK09509	299	fieF ferrous iron efflux protein F; Reviewed	97.8
PRK03557	312	zinc transporter ZitB; Provisional	97.1
KOG1485	412	consensus Mitochondrial Fe2+ transporter MMT1 and	95.45
PF14535	96	AMP-binding_C_2: AMP-binding enzyme C-terminal dom	95.05
PF03780	108	Asp23: Asp23 family; InterPro: IPR005531 This entr	94.17
COG1230	296	CzcD Co/Zn/Cd efflux system component [Inorganic i	93.23
COG4858	226	Uncharacterized membrane-bound protein conserved i	92.27
PF01545	284	Cation_efflux: Cation efflux family; InterPro: IPR	91.79
PRK14637	151	hypothetical protein; Provisional	90.42
PRK14647	159	hypothetical protein; Provisional	89.64
COG0779	153	Uncharacterized protein conserved in bacteria [Fun	89.52
PRK14634	155	hypothetical protein; Provisional	88.93
PRK00092	154	ribosome maturation protein RimP; Reviewed	88.88
PRK14638	150	hypothetical protein; Provisional	88.73
PRK14635	162	hypothetical protein; Provisional	88.35
PRK14640	152	hypothetical protein; Provisional	88.23
PF09580	177	Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ	88.12
TIGR02898	158	spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ	87.71
PRK14630	143	hypothetical protein; Provisional	87.21
PRK05783	84	hypothetical protein; Provisional	86.18
PRK14633	150	hypothetical protein; Provisional	85.97
KOG1484	354	consensus Putative Zn2+ transporter MSC2 (cation d	85.54
PRK14639	140	hypothetical protein; Provisional	85.36
PRK14646	155	hypothetical protein; Provisional	84.59
PRK14641	173	hypothetical protein; Provisional	83.03
COG1302	131	Uncharacterized protein conserved in bacteria [Fun	82.38
PF07444	84	Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR01	80.81

>COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]

Probab=100.00  E-value=2.9e-54  Score=377.48  Aligned_cols=265  Identities=25%  Similarity=0.444  Sum_probs=248.7

Q ss_pred             hhhhhHHHHHHhcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 023476            2 VLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILES   81 (281)
Q Consensus         2 ~~~i~~~~~~~~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~es   81 (281)
                      .+++.|+++|+++||.||+|||+||+.|++++++++++.++++||||++|||||+|+|++++++.+++++++|+.+++++
T Consensus        24 ~l~~~K~~~g~~~gS~ALlADaihs~~D~~~si~~l~~l~~s~kp~d~~HpyGh~k~E~l~sl~~~~~i~~~g~~i~~~a  103 (304)
T COG0053          24 ALALLKLIAGILTGSVALLADAIHSLSDIVASLIVLIGLRISSKPPDRDHPYGHGKAETLASLIVSILIFAAGFEILLEA  103 (304)
T ss_pred             HHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHH----HhCCHHHHHhHHhhhHHHHHHHHHHHHHHHHhhh-c
Q 023476           82 LRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCR----AFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYI-D  156 (281)
Q Consensus        82 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~s~~l~a~~~~~~~D~~~s~~~v~~~~~~~~~-~  156 (281)
                      +.++++|.+.     ++.+++++++.++.++++++++|.+    |.+|+.++++++|+++|+++| ++++++++..++ |
T Consensus       104 ~~~~~~~~~~-----~~~~~~~~v~l~s~~~~~~l~~~~~~~~kk~~S~aL~Ada~h~~sD~~ts-~~~lvgl~~~~~g~  177 (304)
T COG0053         104 IKRLISPQPV-----EPPLLALGVALISIVIKEALYRYLRRVGKKTNSQALIADALHHRSDVLTS-LAVLVGLLGSLLGW  177 (304)
T ss_pred             HHHHhCCCCC-----CccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHH-HHHHHHHHHHHhCc
Confidence            9999997762     4467889999999999999999975    479999999999999999997 777888776666 6


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCCC
Q 023476          157 DWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPAS  236 (281)
Q Consensus       157 ~~~D~i~s~~i~~~i~~~~~~~~~~~~~~Ll~~~~~~~~~~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~~  236 (281)
                      +|+||+++++|++++++++++++|++.+.|+|+.+|++..+++++.+.+ .|||.++|++|.|+.|+.+++++|++++++
T Consensus       178 ~~lD~i~a~~I~~~Il~~~~~~~~~s~~~L~d~~~~~~~~~~i~~~i~~-~~~V~~v~~lr~R~~G~~~~id~~i~v~~~  256 (304)
T COG0053         178 PWLDPLAALLISLYILKTGFRLFKESVNELMDAALDPEDLEKIRAIILS-VPGVKGVHDLRTRKSGSRIFIDVHIEVDPD  256 (304)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCHHHHHHHHHHHhc-CCcceeeecceeeeeCCeEEEEEEEEECCC
Confidence            9999999999999999999999999999999999999999999999987 899999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHhc-CCCceeEEEEeeccCCCC
Q 023476          237 MPLQEAHDIGESLQEKLEL-LPEIERAFVHLDYEYTHR  273 (281)
Q Consensus       237 ~~~~~~~~i~~~i~~~l~~-~~~i~~v~i~iep~~~~~  273 (281)
                      ++++|+|++.+++++.+++ .|.+.+++||+||.....
T Consensus       257 ls~~eah~I~~~ie~~i~~~~~~~~~v~IhveP~~~~~  294 (304)
T COG0053         257 LSLEEAHEIADEVEKRIKKEFPKVADVTIHVEPLGEKE  294 (304)
T ss_pred             CChHHHHHHHHHHHHHHHHhcCCCceEEEEecCCcccc
Confidence            9999999999999999986 555999999999997543

>PRK09509 fieF ferrous iron efflux protein F; Reviewed

Probab=100.00  E-value=5.8e-52  Score=364.84  Aligned_cols=262  Identities=19%  Similarity=0.247  Sum_probs=238.4

Q ss_pred             hhhhhHHHHHHhcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 023476            2 VLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILES   81 (281)
Q Consensus         2 ~~~i~~~~~~~~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~es   81 (281)
                      +++++|+++|+++||.|+++||+|++.|++++++++++.+.++||+|++|||||+|+|+++++++++++++.++++++||
T Consensus        22 ~l~i~k~~~g~~sgS~allaDa~hsl~D~~~~~l~l~~~~~s~k~~d~~~pyG~~r~E~l~~l~~~~~l~~~~~~~~~es  101 (299)
T PRK09509         22 LLLLIKIFAWWYTGSVSLLAALVDSLVDIAASLTNLLVVRYSLQPADDEHTFGHGKAESLAALAQSMFISGSALFLFLTG  101 (299)
T ss_pred             HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHH----HhCCHHHHHhHHhhhHHHHHHHHHHHHHHHHhhh-c
Q 023476           82 LRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCR----AFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYI-D  156 (281)
Q Consensus        82 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~s~~l~a~~~~~~~D~~~s~~~v~~~~~~~~~-~  156 (281)
                      ++++++|++.     +....+++++.++.++|.+++++.+    +.+|+++++++.|+++|+++| +++++++++.++ |
T Consensus       102 i~~l~~~~~~-----~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~~~s-~~vl~~~~~~~~g~  175 (299)
T PRK09509        102 IQHLISPTPM-----NDPGVGIIVTLVALICTLILVTFQRWVVRKTQSQAVRADMLHYQSDVMMN-GAILLALGLSWYGW  175 (299)
T ss_pred             HHHHcCCCCC-----CcchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCh
Confidence            9999998762     2234556677777888887766654    578999999999999999997 677777766655 7


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCCC
Q 023476          157 DWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPAS  236 (281)
Q Consensus       157 ~~~D~i~s~~i~~~i~~~~~~~~~~~~~~Ll~~~~~~~~~~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~~  236 (281)
                      +|+||++++++++++++.+++++|++.+.|+|+++|++..++|++.+++ .|||.++|++|+|+.|++.++++|++++++
T Consensus       176 ~~~D~i~aiii~~~il~~~~~i~~~~~~~Ll~~~~~~~~~~~I~~~i~~-~~~v~~v~~l~~~~~G~~~~v~v~i~v~~~  254 (299)
T PRK09509        176 HRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEIIDIVTS-WPGVSGAHDLRTRQSGPTRFIQLHLEMEDN  254 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHh-CCCCcCceeeeeEeeCCeEEEEEEEEECCC
Confidence            8999999999999999999999999999999999999999999999987 899999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHhcCCCceeEEEEeeccC
Q 023476          237 MPLQEAHDIGESLQEKLELLPEIERAFVHLDYEY  270 (281)
Q Consensus       237 ~~~~~~~~i~~~i~~~l~~~~~i~~v~i~iep~~  270 (281)
                      ++++|+|++++++++.+++..+..+++||+||+.
T Consensus       255 ~~~~e~h~i~~~ie~~l~~~~~~~~v~ihveP~~  288 (299)
T PRK09509        255 LPLVQAHMIADQVEQALLRRFPGSDVIIHQDPCS  288 (299)
T ss_pred             CCHHHHHHHHHHHHHHHHHhCCCCEEEEEeCCCC
Confidence            9999999999999999976433457999999975

>PRK03557 zinc transporter ZitB; Provisional

Probab=100.00  E-value=7.1e-51  Score=359.20  Aligned_cols=262  Identities=17%  Similarity=0.228  Sum_probs=230.5

Q ss_pred             hhhhhHHHHHHhcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 023476            2 VLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILES   81 (281)
Q Consensus         2 ~~~i~~~~~~~~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~es   81 (281)
                      +++++|+++|+++||.|+++||+|++.|++++++++++.++++||+|++|||||+|+|++++++++++++++++++++||
T Consensus        30 ~l~i~k~~~g~~tgS~AllaDa~hsl~D~~~~~~~l~a~~~s~kp~d~~hpyG~~r~E~l~al~~~~~l~~~~~~i~~ea  109 (312)
T PRK03557         30 GFMLVEVIGGFLSGSLALLADAGHMLTDAAALLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIALVVITILIVWEA  109 (312)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH---hCCHHHHHhHHhhhHHHHHHHHHHHHHH-HHhhh-c
Q 023476           82 LRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRA---FTNEIVKAYAQDHFFDVITNIIGLVAVL-LANYI-D  156 (281)
Q Consensus        82 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~s~~l~a~~~~~~~D~~~s~~~v~~~~-~~~~~-~  156 (281)
                      ++++++|.+ +    . ..+++++++.+.++|.+++++.++   .+|.+++++++|+++|+++| ++++++. +..++ |
T Consensus       110 i~~l~~~~~-~----~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~s~~l~a~~~h~~~D~l~s-~~vlv~~~~~~~~g~  182 (312)
T PRK03557        110 IERFRTPRP-V----A-GGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHVLGDLLGS-VGAIIAALIIIWTGW  182 (312)
T ss_pred             HHHHcCCcc-c----c-chHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCC
Confidence            999998765 1    1 245556667777888877776554   46889999999999999997 5555544 44443 6


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCCC
Q 023476          157 DWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPAS  236 (281)
Q Consensus       157 ~~~D~i~s~~i~~~i~~~~~~~~~~~~~~Ll~~~~~~~~~~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~~  236 (281)
                      +|+||++++++++++++.+++++|++++.|+|.+||++..+++++.+.+..|||+++|++|+|+.|+++++++|++++++
T Consensus       183 ~~~Dpi~~ilis~~i~~~~~~l~~~~~~~Lld~~p~~~~~~~i~~~i~~~~~gV~~vh~l~~~~~G~~~~v~~hv~v~~~  262 (312)
T PRK03557        183 TPADPILSILVSVLVLRSAWRLLKESVNELLEGAPVSLDIAELKRRLCREIPEVRNVHHVHVWMVGEKPVMTLHVQVIPP  262 (312)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCHHHHHHHHHhcCCCceeEEEEEEEEeCCeEEEEEEEEECCC
Confidence            89999999999999999999999999999999988877788998877434899999999999999999999999999887


Q ss_pred             CCHHHHHHHHHHHHHHHhcCCCceeEEEEeeccCCCC
Q 023476          237 MPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYTHR  273 (281)
Q Consensus       237 ~~~~~~~~i~~~i~~~l~~~~~i~~v~i~iep~~~~~  273 (281)
                      .   +.+++++++++.+++.+++.++|||+||+.++.
T Consensus       263 ~---~~~~i~~~i~~~l~~~~~i~~vtIh~e~~~~~~  296 (312)
T PRK03557        263 H---DHDALLDRIQDYLMHHYQIEHATIQMEYQPCHG  296 (312)
T ss_pred             C---CHHHHHHHHHHHHHHhCCCCEEEEEeccCcCCC
Confidence            5   568999999999987678999999999986443

>TIGR01297 CDF cation diffusion facilitator family transporter

Probab=100.00  E-value=8.1e-50  Score=346.93  Aligned_cols=261  Identities=21%  Similarity=0.376  Sum_probs=238.6

Q ss_pred             hhhhhHHHHHHhcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 023476            2 VLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILES   81 (281)
Q Consensus         2 ~~~i~~~~~~~~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~es   81 (281)
                      +++++|+++|+++||.++++||+|++.|++++++++++.+.++||||++|||||+|+|+++++++++++++.++++++++
T Consensus         1 ~l~~~k~~~g~~~~S~allada~~s~~D~~~~~~~l~~~~~~~~~~d~~~pyG~~r~E~l~~l~~~~~l~~~~~~~~~~s   80 (268)
T TIGR01297         1 LLMLIKIVGGLLSGSLALLADAIHSLSDVAASAIALLALRISRRPADERHPFGHGRAEILAALLNGLFLVVVALFILYEA   80 (268)
T ss_pred             CEEEeehHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH----hCCHHHHHhHHhhhHHHHHHHHHHHHHHHHhhh-c
Q 023476           82 LRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRA----FTNEIVKAYAQDHFFDVITNIIGLVAVLLANYI-D  156 (281)
Q Consensus        82 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~s~~l~a~~~~~~~D~~~s~~~v~~~~~~~~~-~  156 (281)
                      ++++++|++.     ....+++.++.++.++|.+++++.++    .+|+++++++.|+++|.++| ++++++..+..+ +
T Consensus        81 i~~l~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~s~~l~a~~~~~~~D~~~s-~~vli~~~~~~~~~  154 (268)
T TIGR01297        81 IERLINPEPE-----IDGGTMLIVAIVGLIVNLILALYLHRVGHRLGSLALRAAALHVLSDALSS-VGVLIGALLIYFGW  154 (268)
T ss_pred             HHHHhCCCCc-----ccchhHHHHHHHHHHHHHHHHHHHHHhCccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence            9999987642     23456677788888899998888765    67899999999999999997 566665555444 7


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHhhcCCCcceeeeEEEEEecC-eEEEEEEEEcCC
Q 023476          157 DWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGS-HYFVEVDIVLPA  235 (281)
Q Consensus       157 ~~~D~i~s~~i~~~i~~~~~~~~~~~~~~Ll~~~~~~~~~~~i~~~i~~~~~~v~~i~~~~~~~~g~-~~~v~~~i~v~~  235 (281)
                      +|+||++++++++++++.+++++|++...|+|.+||++..+++++.+++ .|||.++|++|+|+.|+ ++++++|+++++
T Consensus       155 ~~~D~l~~i~i~~~i~~~~~~l~~~~~~~Ll~~~~~~~~~~~i~~~i~~-~~~v~~v~~~~~~~~G~~~~~v~~~v~v~~  233 (268)
T TIGR01297       155 HWADPIAALLISLLILYTAFRLLKESINVLLDAAPDEEDLEEIKKAILS-IPGVKGVHDLHIWRIGPGKLFLDVHVVVDP  233 (268)
T ss_pred             HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcccHHHHHHHHhc-CCCcccceEeEEEEcCCCCEEEEEEEEECC
Confidence            8999999999999999999999999999999999889999999999986 89999999999999999 799999999999


Q ss_pred             CCCHHHHHHHHHHHHHHHh-cCCCceeEEEEeecc
Q 023476          236 SMPLQEAHDIGESLQEKLE-LLPEIERAFVHLDYE  269 (281)
Q Consensus       236 ~~~~~~~~~i~~~i~~~l~-~~~~i~~v~i~iep~  269 (281)
                      +++++|+|++.+++++.++ +.|++.+++||+||+
T Consensus       234 ~~~~~~ah~i~~~i~~~i~~~~~~v~~v~ih~ep~  268 (268)
T TIGR01297       234 DLDLKQAHDIALEIEREILKRHPGIEHVTIQVEPC  268 (268)
T ss_pred             CCChhHHHHHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            9999999999999999996 569999999999994

This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.

>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]

Probab=100.00  E-value=7.9e-47  Score=323.35  Aligned_cols=259  Identities=15%  Similarity=0.223  Sum_probs=231.6

Q ss_pred             hhhhhHHHHHHhcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 023476            2 VLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILES   81 (281)
Q Consensus         2 ~~~i~~~~~~~~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~es   81 (281)
                      +++++|+++|+++||+||+||++|+++|+++.++++++.+.++|+++++|||||+|+|.+++++++++++..++++++|+
T Consensus        33 ~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~~~a~r~~~~~~TfGy~R~eiLaa~~nav~Li~~s~~I~~EA  112 (296)
T COG1230          33 AFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAIKLARRPATKRFTFGYKRLEILAAFLNALLLIVVSLLILWEA  112 (296)
T ss_pred             HHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHh--CCHHHHHhHHhhhHHHHHHHHHHHHHHHHhhh-ccc
Q 023476           82 LRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRAF--TNEIVKAYAQDHFFDVITNIIGLVAVLLANYI-DDW  158 (281)
Q Consensus        82 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~s~~l~a~~~~~~~D~~~s~~~v~~~~~~~~~-~~~  158 (281)
                      ++|+++|.+      .+...++.++++++++|....+..++.  ++.++++...|.++|+++|..+++++++..++ |+|
T Consensus       113 i~R~~~P~~------i~~~~ml~va~~GL~vN~~~a~ll~~~~~~~lN~r~a~LHvl~D~Lgsv~vIia~i~i~~~~w~~  186 (296)
T COG1230         113 IQRLLAPPP------IHYSGMLVVAIIGLVVNLVSALLLHKGHEENLNMRGAYLHVLGDALGSVGVIIAAIVIRFTGWSW  186 (296)
T ss_pred             HHHhcCCCC------CCccchHHHHHHHHHHHHHHHHHhhCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            999999988      223678889999999999998888775  46899999999999999984444444555555 789


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHhhcCCCcceeeeEEEEEecCe-EEEEEEEEcCCCC
Q 023476          159 MDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSH-YFVEVDIVLPASM  237 (281)
Q Consensus       159 ~D~i~s~~i~~~i~~~~~~~~~~~~~~Ll~~~~~~~~~~~i~~~i~~~~~~v~~i~~~~~~~~g~~-~~v~~~i~v~~~~  237 (281)
                      +||+++++++++++..+++++|++.+.|++..|+....+++++.+.+ .|||.++||+|+|+.+++ ...++|+++++..
T Consensus       187 ~Dpi~si~i~~lil~~a~~l~k~s~~iLle~~P~~id~~~~~~~l~~-~~~v~~vhdlHvWsi~~~~~~~t~Hv~v~~~~  265 (296)
T COG1230         187 LDPILSIVIALLILSSAWPLLKESLNILLEGVPEGIDIDKVREALLR-IPGVASVHDLHVWSITGGEHALTLHVVVDEVA  265 (296)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccCHHHHHHHHhc-CCCccceeecccCCCCCCceeEEEEEEecCcc
Confidence            99999999999999999999999999999988877889999999985 899999999999999765 8999999999544


Q ss_pred             CHHHHHHHHHHHHHHHhcCCCceeEEEEeeccC
Q 023476          238 PLQEAHDIGESLQEKLELLPEIERAFVHLDYEY  270 (281)
Q Consensus       238 ~~~~~~~i~~~i~~~l~~~~~i~~v~i~iep~~  270 (281)
                      +.+   +..+++++.+.+.+++.++|+|+|+..
T Consensus       266 ~~~---~~~~~~~~~l~~~~~I~hvTiQ~e~~~  295 (296)
T COG1230         266 DAD---AALDQIVRRLLEKYGIEHVTIQLETEG  295 (296)
T ss_pred             chH---HHHHHHHHHHhhhcCcceEEEEecCCC
Confidence            332   388888888887789999999999874

>PF01545 Cation_efflux: Cation efflux family; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt

Probab=100.00  E-value=2e-46  Score=328.27  Aligned_cols=264  Identities=27%  Similarity=0.485  Sum_probs=228.3

Q ss_pred             ChhhhhHHHHHHhcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHH
Q 023476            1 MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILE   80 (281)
Q Consensus         1 ~~~~i~~~~~~~~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~e   80 (281)
                      ++++++|+++|+.+||.++++|++|++.|+++.++++++.+.++||+|++|||||+|+|++++++.++++++.++.++++
T Consensus         9 ~~~~~~~~~~~~~t~S~al~~d~~~sl~d~~~~~~~l~~~~~~~~~~~~~~pfG~~r~e~l~~~~~~~~l~~~~~~~~~~   88 (284)
T PF01545_consen    9 LILAVVKIIAGIITGSLALLADGLHSLADAISLLISLFALRIASKPPDKRYPFGYGRLEPLAALIVSILLIFLGLFLIVE   88 (284)
T ss_dssp             CCTHHCTTCSS-SSSSS---SCCCHHHHHHHHHHHHHHHHHHHTSS-SSSSSSSSTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccchhhhhhHhhhhhhhhHhhhHHHHHHH
Confidence            36789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH----hC--CHHHHHhHHhhhHHHHHHHHHHHHHHHHhh
Q 023476           81 SLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRA----FT--NEIVKAYAQDHFFDVITNIIGLVAVLLANY  154 (281)
Q Consensus        81 si~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~--s~~l~a~~~~~~~D~~~s~~~v~~~~~~~~  154 (281)
                      ++++++++++.     ....+.+.+++++.++|..++++.+|    .+  |+.+++++.+++.|.+.| ++++++.++..
T Consensus        89 si~~~~~~~~~-----~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~~~~~~~~d~~~s-~~v~i~~~~~~  162 (284)
T PF01545_consen   89 SIQRLISPHEP-----SPPGIVLIVALVSIIVNLLLAWYLRRVGKRLQRRSPALRADALHSLIDVLSS-LAVLISLLLAY  162 (284)
T ss_dssp             HTTTSSSSSSS-----STTTS-THHHHHHHHHHHHHHHHHHHHHHHS---SHHHHHHHHHHHHHTS-S-STS-SSSTSSS
T ss_pred             Hhhcccccccc-----hhhhhhhhhhhhhhhHHHHHHHHHhhcccccccccccchhhhhhcccchhHH-HHHHHHHHHHH
Confidence            99999998652     22233444477788888888887765    45  999999999999999997 66666655544


Q ss_pred             h--cc-chhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHhhcCCCcceeeeEEEEEecC-eEEEEEE
Q 023476          155 I--DD-WMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGS-HYFVEVD  230 (281)
Q Consensus       155 ~--~~-~~D~i~s~~i~~~i~~~~~~~~~~~~~~Ll~~~~~~~~~~~i~~~i~~~~~~v~~i~~~~~~~~g~-~~~v~~~  230 (281)
                      +  +. |+||++++++++++++.+++++|++...|+|.+||++..+++++.+++ .|++.+++++|+|+.|+ ++++++|
T Consensus       163 ~~~~~~~~D~v~~l~i~~~i~~~~~~~~~~~~~~Ll~~~~~~~~~~~i~~~i~~-~~~v~~v~~~~~~~~g~~~~~v~i~  241 (284)
T PF01545_consen  163 LGPWFWYADPVASLLIALFILYSGYPLIKESIRILLDASPDPELVEKIRRIIES-VPGVIEVHDLRVWQVGRNKYVVEIH  241 (284)
T ss_dssp             TT-STS-SSHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SHHHHHHHHHHHHHHH-TSS-SEEEEEEEEEETT-EEEEEEE
T ss_pred             HHhcccccchhhhhHHHHHHhhhhhhchhhhhcccccccccccchhHHHHhhcc-CCceEeccceEEEEecCCcEEEEEE
Confidence            4  34 599999999999999999999999999999998899999999999987 89999999999999999 7999999


Q ss_pred             EEcCCCCCHHHHHHHHHHHHHHHhc-CCCceeEEEEeeccCC
Q 023476          231 IVLPASMPLQEAHDIGESLQEKLEL-LPEIERAFVHLDYEYT  271 (281)
Q Consensus       231 i~v~~~~~~~~~~~i~~~i~~~l~~-~~~i~~v~i~iep~~~  271 (281)
                      ++++++++++|++++++++++.+++ ++++.+++||+||+.+
T Consensus       242 v~v~~~~~v~~~~~i~~~i~~~l~~~~~~i~~v~I~~~p~~~  283 (284)
T PF01545_consen  242 VQVDPDMSVEEAHEIRERIEKRLREKFPGIYDVTIHIEPDEE  283 (284)
T ss_dssp             EEETTTSBHHHHHHHHHHHHHHHHHHSTTCEEEEEEEEECGG
T ss_pred             EEeCCCCCHHHHHHHHHHHHHHHHHhCCCcEEEEEEEEecCC
Confidence            9999999999999999999999975 7899999999999864

These proteins are considered to be efflux pumps that remove these ions from cells [, ], however others are implicated in ion uptake []. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3BYP_B 3BYR_A 3H90_B 2QFI_B 2ZZT_A.

>KOG1485 consensus Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]

Probab=100.00  E-value=1.4e-43  Score=310.76  Aligned_cols=278  Identities=52%  Similarity=0.817  Sum_probs=254.1

Q ss_pred             ChhhhhHHHHHHhcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHH
Q 023476            1 MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILE   80 (281)
Q Consensus         1 ~~~~i~~~~~~~~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~e   80 (281)
                      ++++++|+++|+.+||+|++||++|++.|.++.+++++..+.++++++.+||+|++|+|+++.+..+.+|.++|..++.+
T Consensus       125 igl~vaK~~as~~sgS~aIiAsavdSl~Dl~s~fvll~s~~~~~k~~~~~YP~G~~r~EtvG~i~~S~iMa~agv~ii~s  204 (412)
T KOG1485|consen  125 IGLAVAKVVASYLSGSMAIIASAVDSLSDLVSGFVLLFSLRAAKKKPTYEYPRGRGRVETVGLIAVSVIMAMAGVQIIWS  204 (412)
T ss_pred             HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhCCCCCCcccchhHHHHHHHHHHHHHHHHHH
Confidence            36889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCccc-cccch-----hhHHHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHhHHhhhHHHHHHHHHHHHHHHHh
Q 023476           81 SLRTLVSNEDQF-NLTKE-----QEQWVVGIMLSVTLVKLLLVVYCRAF-TNEIVKAYAQDHFFDVITNIIGLVAVLLAN  153 (281)
Q Consensus        81 si~~l~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~-~s~~l~a~~~~~~~D~~~s~~~v~~~~~~~  153 (281)
                      |+.++.+|.... +.++.     ..+|.+++++....+++.+++++++. +|..+++.|+|+++|+++|+++++++.+..
T Consensus       205 Sl~~i~~~~~~~~~~~~~q~~~~~a~~~i~i~is~~~vk~~l~~~c~~~~ns~iv~a~A~dHr~D~lTn~vaLva~~la~  284 (412)
T KOG1485|consen  205 SLRLIVGPHAIGHHHNPSQLIFINALWLIAIMISAKEVKLRLTLYCAIKTNSNIVRANAWDHRNDVLTNSVALVAASLAY  284 (412)
T ss_pred             hHHhhhcccccccccCchhhcccchhhhheehhhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            999998843322 11111     12377778888888999999998765 559999999999999999999999999998


Q ss_pred             hhccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEc
Q 023476          154 YIDDWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVL  233 (281)
Q Consensus       154 ~~~~~~D~i~s~~i~~~i~~~~~~~~~~~~~~Ll~~~~~~~~~~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v  233 (281)
                      ++|+|+||++++++|.+++++|.+...+++++|.|++.|||.++++...+.++-+.++.++.++.+..|..+.+++|+++
T Consensus       285 ~~~~~lDP~gailVS~~ii~t~~~t~~~~i~~Lvg~~a~pe~L~~~~~~~l~~~~~i~~idtv~~y~~g~~~~Vev~ivl  364 (412)
T KOG1485|consen  285 YYNYWLDPIGAILVSTYIIYTGGRTGLENIKELVGRSAPPEYLEIITYLILQHGKLIKHIDTVRAYTFGSHYFVEVHIVL  364 (412)
T ss_pred             hhhhcccchhhhhhheehhhhhhHHHHHHHHHHhCCCCCHHHHHHHHHHHHhhcCccccceeeeeecccceEEEEEeeec
Confidence            89999999999999999999999999999999999999999999999999886668899999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHhcCCCceeEEEEeeccCCCCCcccc
Q 023476          234 PASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPEHAQ  278 (281)
Q Consensus       234 ~~~~~~~~~~~i~~~i~~~l~~~~~i~~v~i~iep~~~~~~~~~~  278 (281)
                      ++++++.++|++.+-+++.|+..|.+.++.+|+|.+..+.|++..
T Consensus       365 ~~~~~l~~ah~i~E~lq~~ie~l~ever~fvh~d~e~~hr~~~~~  409 (412)
T KOG1485|consen  365 DEDLSLSVAHDIGETLQKKIELLPEVERAFVHIDYEFLHRPHHEH  409 (412)
T ss_pred             CCCCccHHHHHHHHHHHHHHhhcchheeeeeecCccccCCchHhh
Confidence            999999999999999999999999999999999999988888764

>KOG1484 consensus Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]

Probab=100.00  E-value=3.5e-34  Score=243.77  Aligned_cols=258  Identities=14%  Similarity=0.196  Sum_probs=213.7

Q ss_pred             hhhhhHHHHHHhcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 023476            2 VLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILES   81 (281)
Q Consensus         2 ~~~i~~~~~~~~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~es   81 (281)
                      .++..+++.+..+||..+++|++|+++|+.+..+.+++..++++|++.+||||++|+|.++++.+++++.+.+++++.|+
T Consensus        46 ~~~fv~l~y~~~snSlgLiSda~hm~FDctal~~gL~a~~is~~~~~~~fsyG~~r~evLagF~n~vflvl~a~fi~~Es  125 (354)
T KOG1484|consen   46 AFMFVELFYGSWSNSLGLISDAFHMFFDCTALLAGLYASVISKWPANDKFSYGYGRIEVLAGFVNGVFLVLIAFFIFSES  125 (354)
T ss_pred             HHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHhhhhHHHHhcCCCccccCcchhHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence            46778999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH-----h---------------------------------
Q 023476           82 LRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRA-----F---------------------------------  123 (281)
Q Consensus        82 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~---------------------------------  123 (281)
                      ++|+++|..   .   ..+-...++..+.++|.+-.+..+.     .                                 
T Consensus       126 ~eRl~~ppe---i---~t~rllvVS~~gllvnLvGi~aF~h~~~h~hg~~~~s~~~~h~~~~~~~~~~~~~~~~~~~~~i  199 (354)
T KOG1484|consen  126 VERLFDPPE---I---HTNRLLVVSVLGLLVNLVGILAFSHGHAHSHGSHHHSSHSGHLALLFHSLLGVWDLHHHAHGHI  199 (354)
T ss_pred             HHHhcCchh---c---CCceeEEeeHHHHHHHHHHHHHhccccccccCCCCccccccchhcccccccccccccccccccc
Confidence            999999854   2   1223334455555566553322211     0                                 


Q ss_pred             ---CCHHHHHhHHhhhHHHHHHHHHHHHHHHH-hhh-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHH
Q 023476          124 ---TNEIVKAYAQDHFFDVITNIIGLVAVLLA-NYI-DDWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQK  198 (281)
Q Consensus       124 ---~s~~l~a~~~~~~~D~~~s~~~v~~~~~~-~~~-~~~~D~i~s~~i~~~i~~~~~~~~~~~~~~Ll~~~~~~~~~~~  198 (281)
                         .+..+.....|.++|.+.| ++++++.+. .++ |.++||+++++|+..++.+.++++|++.+.||++ .||+..++
T Consensus       200 ~g~~~~~m~gifLHVLaDtlgS-vGviist~Li~~~gw~~aDpicsllIailIf~sv~PL~k~s~~iLLq~-tPp~~~~~  277 (354)
T KOG1484|consen  200 HGHSHENMPGIFLHVLADTLGS-VGVIISTLLIKLFGWMIADPICSLLIAILIFLSVLPLLKYSGKILLQR-TPPHLENS  277 (354)
T ss_pred             CCcccccccchhHHHHHHHhcc-hHHHHHHHHHHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CChhhhhH
Confidence               1122446678999999997 677766555 444 7899999999999999999999999999999996 56777777


Q ss_pred             HHHHHhh--cCCCcceeeeEEEEEecCe-EEEEEEEEcCCCCCHHHHHHHHHHHHHHHhcCCCceeEEEEeeccCC
Q 023476          199 LTYLCWN--HHKSIRHIDTVRAYTFGSH-YFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYT  271 (281)
Q Consensus       199 i~~~i~~--~~~~v~~i~~~~~~~~g~~-~~v~~~i~v~~~~~~~~~~~i~~~i~~~l~~~~~i~~v~i~iep~~~  271 (281)
                      +.+++++  ..+||.++.+-|+|+.+++ +...+|++|..|.   +.+.+.+++.+++++. ++++.|+|+|.+..
T Consensus       278 l~~cl~~Is~~~gV~~v~~~hFWt~~~g~~vGtlhl~V~~da---de~~vl~~V~~~~~~~-gV~~ltvQv~~~~~  349 (354)
T KOG1484|consen  278 LKQCLRQISTLDGVTSVQNPHFWTLESGSVVGTLHLQVSSDA---DEQSVLAHVTRKLEDA-GVKDLTVQVEKENS  349 (354)
T ss_pred             HHHHHHHhhccccceeeccCceeeccCCceEEEEEEEEecCc---chhHHHHHHHHHHHhc-ceeEEEEEEecccc
Confidence            7776655  3789999999999999987 9999999999886   3467888998888875 79999999888753

>KOG1483 consensus Zn2+ transporter ZNT1 and related Cd2+/Zn2+ transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]

Probab=100.00  E-value=5.8e-35  Score=252.97  Aligned_cols=261  Identities=16%  Similarity=0.214  Sum_probs=215.3

Q ss_pred             ChhhhhHHHHHHhcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHH
Q 023476            1 MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILE   80 (281)
Q Consensus         1 ~~~~i~~~~~~~~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~e   80 (281)
                      ++++++|++.|+.++|+||++|++|++.|+++.++++++.+.+++.+++++||||.|.|.++++++++|+....+.++.|
T Consensus        19 iiFfvLEli~gyv~~sLaLiadSfHML~dIiaLivaf~~ik~a~~~~~~k~tyGw~rAEilGalvN~ifl~alc~~I~~E   98 (404)
T KOG1483|consen   19 IIFFVLELITGYVTNSLALIADSFHMLNDIIALIVAFWAIKEAKRIPLQKYTYGWARAEILGALVNAIFLTALCVSILIE   98 (404)
T ss_pred             HHHHHhhhhhhcccchHHHHhhHHHHHHHHHHHHHHHHHHHhhhcCcccccCcchhHHHHHhhhhHHHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999999999999977799999999999999999999999999999999


Q ss_pred             HHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q 023476           81 SLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRA--------------------------------------  122 (281)
Q Consensus        81 si~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------------------------------------  122 (281)
                      +++|+++|...     +.+...+.+++++.+.|.+-......                                      
T Consensus        99 A~~R~I~p~~i-----~~P~~vL~vgi~gLi~Nvlg~~lfhdhg~~h~~~~H~h~hg~~~~~~~~~~~~~~~~~~G~~t~  173 (404)
T KOG1483|consen   99 AIERIIEPHHI-----ENPILVLYVGIIGLISNVLGLFLFHDHGHDHGHGVHGHSHGGMKGFIGLNLTHLHSHAIGCNTL  173 (404)
T ss_pred             HHHhhcCCccc-----cCceeeehhhHHHHHHHHHHhheeeccCcccCCcCCCCCCCccccchhhhccCCchhccCCcch
Confidence            99999998873     33344445555555555532211100                                      


Q ss_pred             --------------------------------------------------hCCHHHHHhHHhhhHHHHHHHHHHHHHHHH
Q 023476          123 --------------------------------------------------FTNEIVKAYAQDHFFDVITNIIGLVAVLLA  152 (281)
Q Consensus       123 --------------------------------------------------~~s~~l~a~~~~~~~D~~~s~~~v~~~~~~  152 (281)
                                                                        .++.+++....|.+.|++.+ +.++.+.+.
T Consensus       174 ~~~~d~~~~~~p~~~l~~~~~~N~~~~s~pv~~~~S~~r~~~~~~~~e~~~~~lnmhGv~LhvL~Dalg~-I~Vi~~A~~  252 (404)
T KOG1483|consen  174 AKQLDTPLGPGPNAHLSGVMSQNLDGSSTPVQNHGSLSRDDAREKTEEKLDRNLNMHGVFLHVLGDALGS-IIVIVSALF  252 (404)
T ss_pred             hhccccCCCCcchhhhccccccCCCCCCCccccCCcccccchhhhhhhhhhccccccceeeeeecccccc-eEEEEEEEE
Confidence                                                              01122344466788899987 555544444


Q ss_pred             hhh----c-cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHhhcCCCcceeeeEEEEEe-cCeEE
Q 023476          153 NYI----D-DWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTF-GSHYF  226 (281)
Q Consensus       153 ~~~----~-~~~D~i~s~~i~~~i~~~~~~~~~~~~~~Ll~~~~~~~~~~~i~~~i~~~~~~v~~i~~~~~~~~-g~~~~  226 (281)
                      .|+    | .|+||++|++++.+++.++|+++|++...|++..|..-..+++++.+.+ +|||.++||+++|++ |..+.
T Consensus       253 v~~t~~~~~~y~DP~lsi~~~~ii~~sa~pl~k~s~liLLq~~P~~i~ld~v~~~l~~-~~gv~~vh~lhvWqL~~~r~I  331 (404)
T KOG1483|consen  253 VYKTEYSWAYYLDPILSIVLTVIILFSAYPLLKESALILLQTTPGSIDLDIVEKDLLT-VPGVISVHDLHVWQLAGSRII  331 (404)
T ss_pred             EEecceehhhhcCchHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCcccHHHHHHHHhc-CcceeeeeeeeeeeeccceEE
Confidence            333    3 6899999999999999999999999999999988777789999999987 999999999999999 56699


Q ss_pred             EEEEEEcCCCCCHHHHHHHHHHHHHHHhcCCCceeEEEEeeccCCC
Q 023476          227 VEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYTH  272 (281)
Q Consensus       227 v~~~i~v~~~~~~~~~~~i~~~i~~~l~~~~~i~~v~i~iep~~~~  272 (281)
                      .++||+++   ...+..+++++||+.++++ |++.+|||+|.....
T Consensus       332 At~Hi~~~---~p~~~~~~a~~ir~~fh~~-GIhs~TiqPeF~~~~  373 (404)
T KOG1483|consen  332 ATIHIQIQ---NPKEYMKIAEKIRSYFHDQ-GIHSTTIQPEFAPTC  373 (404)
T ss_pred             EEEEEEec---CcHHHHHHHHHHHHHHHhc-CCcceeeccchhhhc
Confidence            99999997   3345669999999999985 999999999988743

>KOG1482 consensus Zn2+ transporter [Inorganic ion transport and metabolism]

Probab=100.00  E-value=1.3e-33  Score=243.77  Aligned_cols=262  Identities=15%  Similarity=0.204  Sum_probs=230.3

Q ss_pred             hhhhhHHHHHHhcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 023476            2 VLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILES   81 (281)
Q Consensus         2 ~~~i~~~~~~~~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~es   81 (281)
                      .+.+.|++.|+..||+|+++||-|-+.|..+..+++++.+.+.+|+++|.+|||.|+|.+++++.-..+.+....+++++
T Consensus        84 ~fm~~E~vGg~~a~SLAImTDAaHlLsD~~sf~isl~slw~s~~pa~~r~sfG~~R~Evlgal~Sv~~IW~~tgvLV~~A  163 (379)
T KOG1482|consen   84 VFMIGEVVGGYKANSLAIMTDAAHLLSDVASFIISLFSLWLSSRPATKRMSFGFHRAEVLGALVSVLLIWVVTGVLVYEA  163 (379)
T ss_pred             HHHHHHHhCCeeccchhhhhcchHHHHHHHHHHHHHHHHHHccCCCCCceecceehHHHHHHHHHHHHHHHhhhhhHHHH
Confidence            46788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH------hC---------------CHHHHHhHHhhhHHHH
Q 023476           82 LRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRA------FT---------------NEIVKAYAQDHFFDVI  140 (281)
Q Consensus        82 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~---------------s~~l~a~~~~~~~D~~  140 (281)
                      ++|++++..+.+     +..|++.+.++.++|..+......      .+               +.++++...|.+.|.+
T Consensus       164 i~Rl~s~~~ev~-----g~~m~i~a~~gv~vNiim~~vL~~~~h~h~H~~~~s~g~~h~~~~~~n~nvraAyiHVlGDli  238 (379)
T KOG1482|consen  164 IQRLLSGDYEVN-----GGIMLITAAVGVAVNIIMGFVLHQSGHGHSHGGSHSHGHSHDHGEELNLNVRAAFVHVLGDLI  238 (379)
T ss_pred             HhhhhcCceeec-----ceEEEEEeehhhhhhhhhhhhhcccCCCCCCCCCCCcCcccccccccchHHHHHHHHHHHHHH
Confidence            999999986433     344555666666777665544321      11               2789999999999999


Q ss_pred             HHHHHHHHHHHHhhh---ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHhhcCCCcceeeeEE
Q 023476          141 TNIIGLVAVLLANYI---DDWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVR  217 (281)
Q Consensus       141 ~s~~~v~~~~~~~~~---~~~~D~i~s~~i~~~i~~~~~~~~~~~~~~Ll~~~~~~~~~~~i~~~i~~~~~~v~~i~~~~  217 (281)
                      .| +|++.+...++|   |...||+++++.+..++.+..+++|+.+..||+..|..-...++++.+.+ .+||+.+|++|
T Consensus       239 QS-vGV~iaa~Ii~f~P~~~i~DpICT~~FSiivl~TT~~i~rd~~~iLmE~~P~~~d~~~~~~~l~~-iegV~~VHdLh  316 (379)
T KOG1482|consen  239 QS-VGVLIAALIIYFKPEYKIADPICTFVFSIIVLGTTITILRDILGILMEGTPRNLDFDKVKKGLLS-IEGVKAVHDLH  316 (379)
T ss_pred             HH-HHHHhhheeEEecccceecCchhhhhHHHHHHHhHHHHHHHHHHHHhcCCCccCcHHHHHHHHhh-hcceeEEEEEE
Confidence            97 888888777776   57899999999999999999999999999999988877788999999987 89999999999


Q ss_pred             EEEecCe-EEEEEEEEcCCCCCHHHHHHHHHHHHHHHhcCCCceeEEEEeeccCCCC
Q 023476          218 AYTFGSH-YFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYTHR  273 (281)
Q Consensus       218 ~~~~g~~-~~v~~~i~v~~~~~~~~~~~i~~~i~~~l~~~~~i~~v~i~iep~~~~~  273 (281)
                      +|..+-+ ....+|+..+++.   +.+++.+++++.+++.+++.++|+|+||...+-
T Consensus       317 IWsiTv~k~~ls~Hv~i~~~a---d~~~vL~~~~~~i~~~~~~~~vTiQie~~~~~~  370 (379)
T KOG1482|consen  317 IWSITVGKVALSVHLAIDSEA---DAEEVLDEARSLIKRRYGISHVTIQIEPYTEEM  370 (379)
T ss_pred             EEEEecCceEEEEEEeecCCC---CHHHHHHHHHHHHHhhcceEEEEEEecCCccch
Confidence            9999865 7899999999664   567899999999998889999999999997653

>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]

Probab=99.98  E-value=1.1e-30  Score=214.40  Aligned_cols=260  Identities=16%  Similarity=0.215  Sum_probs=219.3

Q ss_pred             hhhhhHHHHHHhcchHHHHHhhHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHH
Q 023476            2 VLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQ-TPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILE   80 (281)
Q Consensus         2 ~~~i~~~~~~~~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~-~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~e   80 (281)
                      +++...+++|+.+||.++.-||++|+.|+..+.+++...++.. +|.|.|||||++.+|++.-.+++.+++..+.+.++.
T Consensus        31 i~A~~GIi~GL~~gS~~IiFDGvYSl~da~mtllsL~vsrli~~~p~~~RF~~GfwhlEplvL~ing~ll~ll~lyAlin  110 (314)
T COG3965          31 IFAAFGIIWGLLSGSMSIIFDGVYSLIDAGMTLLSLLVSRLIAKDPRDARFPYGFWHLEPLVLAINGTLLALLCLYALIN  110 (314)
T ss_pred             HHHHHHHHHHHHhcceEEEeccHHHHHHHHHHHHHHHHHHHhccCCCccccCcchhhhhhhHhhhccHHHHHHHHHHHHH
Confidence            5788899999999999999999999999999999999998777 777889999999999999999999999999999999


Q ss_pred             HHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH----hCCHHHHHhHHhhhHHHHHHHHHHHHHHHHhhh-
Q 023476           81 SLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRA----FTNEIVKAYAQDHFFDVITNIIGLVAVLLANYI-  155 (281)
Q Consensus        81 si~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~s~~l~a~~~~~~~D~~~s~~~v~~~~~~~~~-  155 (281)
                      ++..+++++++.+     +.+++..++++...|...++..+|    .+|+.+.++...|++|...| .++.++++..+. 
T Consensus       111 Al~~l~dGGR~v~-----~~~ai~yt~~s~~~Ca~~~~~~~r~nrr~~s~lIald~kqW~Mst~lS-~al~VaF~~a~~l  184 (314)
T COG3965         111 ALGSLLDGGREVE-----PGHAIAYTLVSVTGCAAIAWKLRRLNRRLKSPLIALDTKQWLMSTCLS-AALFVAFAAAWLL  184 (314)
T ss_pred             HHHHHhcCCcccc-----ccHHHHHHHHHHHHHHHHHHHHHhhhccCCCchhhhHHHHHHHHHHHH-HHHHHHHHHHHHh
Confidence            9999999999654     366778888888888888777655    57899999999999999997 677777665542 


Q ss_pred             --------ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHhhcCC--CcceeeeEEEEEecCeE
Q 023476          156 --------DDWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHK--SIRHIDTVRAYTFGSHY  225 (281)
Q Consensus       156 --------~~~~D~i~s~~i~~~i~~~~~~~~~~~~~~Ll~~~~~~~~~~~i~~~i~~~~~--~v~~i~~~~~~~~g~~~  225 (281)
                              .+|+||.+-.+++++++..+++.+|.++++++.-+|+ +..++++....+-++  +.-+ +..++-|.|+..
T Consensus       185 ~~T~~a~l~~Y~DPmvlaL~~~v~IplPlg~vk~al~eiLlmtP~-el~q~ies~~~~~v~k~~f~~-~~~yvArVGr~l  262 (314)
T COG3965         185 AGTKFAHLVVYADPMVLALVCLVFIPLPLGTVKSALREILLMTPN-ELQQSIESHAHEIVEKYGFPS-YHVYVARVGRGL  262 (314)
T ss_pred             ccCchhhhhcccCHHHHHHHHHheeeccHHHHHHHHHHHHhcCcH-HHHHHHHHHHHHHHHHhcCch-HHHHHHHhccce
Confidence                    2799999999999999999999999999999987554 777777765543111  1111 234467889999


Q ss_pred             EEEEEEEcCCCC---CHHHHHHHHHHHHHHHhcCCCceeEEEEeecc
Q 023476          226 FVEVDIVLPASM---PLQEAHDIGESLQEKLELLPEIERAFVHLDYE  269 (281)
Q Consensus       226 ~v~~~i~v~~~~---~~~~~~~i~~~i~~~l~~~~~i~~v~i~iep~  269 (281)
                      ++|+|..+|++.   .+++.++|++++.+.|.+.+.-..+|+.+..+
T Consensus       263 ~IEi~fiip~~~~ar~Ved~d~Irdei~~slg~~g~~rwltvsfT~D  309 (314)
T COG3965         263 FIEIHFIIPRESDARNVEDWDDIRDEIGQSLGSLGYERWLTVSFTRD  309 (314)
T ss_pred             EEEEEEEeCCccCCccchhHHHHHHHHHHHhhcCCcCceEEEEEecc
Confidence            999999998775   48899999999999998877666777766554

>KOG2802 consensus Membrane protein HUEL (cation efflux superfamily) [General function prediction only]

Probab=99.74  E-value=5.4e-17  Score=139.94  Aligned_cols=163  Identities=15%  Similarity=0.141  Sum_probs=116.4

Q ss_pred             hhhhHHHHHHhcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHH-HHHHH
Q 023476            3 LFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQ-IILES   81 (281)
Q Consensus         3 ~~i~~~~~~~~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~-~~~es   81 (281)
                      -+.+|+.+++.|||-+++|+++||+.|.+++.+..++.+.+.+.||..|||||.+.-++.+++.|+.++..|.. -++.+
T Consensus       219 ~~~~Kfg~w~~tgShsmfAEaIHS~aD~~NQ~lLa~Gis~S~q~PD~lhPYGYsnmRyVsSLISgvGIfc~G~GlSiyhG  298 (503)
T KOG2802|consen  219 NCFFKFGAWIYTGSHSMFAEAIHSLADTCNQLLLALGISKSVQTPDPLHPYGYSNMRYVSSLISGVGIFCMGCGLSIYHG  298 (503)
T ss_pred             HHHHHhhHhhhcccHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCCCCCCCcccchhHHHHHHhccceeeecccchhhhc
Confidence            35789999999999999999999999999999999999999999999999999999999999999976665554 67899


Q ss_pred             HHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHH----HH---------------hCCHHHHHhHHhhhHHHHHH
Q 023476           82 LRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC----RA---------------FTNEIVKAYAQDHFFDVITN  142 (281)
Q Consensus        82 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~---------------~~s~~l~a~~~~~~~D~~~s  142 (281)
                      ++.+++|+|-     ++..|.+.+...+++.........    +|               -++|..-+.   ...|...-
T Consensus       299 v~gLlhpePi-----~~l~~ay~il~gSl~~eGasllvAi~evkr~Ak~~gmSi~dYV~~~~DPs~nvV---l~EDtAAV  370 (503)
T KOG2802|consen  299 VMGLLHPEPI-----ESLLWAYCILAGSLVSEGASLLVAINEVKRNAKAKGMSIYDYVMESRDPSTNVV---LLEDTAAV  370 (503)
T ss_pred             cccccCCCCC-----cchHHHHHHHhhHHHhcchHHHHHHHHHHHHHHHcCCCHHHHHhhcCCCcceEE---EecchHHH
Confidence            9999999983     455677666555544332211111    11               122222221   23344332


Q ss_pred             HHHHHHHHH---H-hhh-ccchhHHHHHHHHHHHHHH
Q 023476          143 IIGLVAVLL---A-NYI-DDWMDPVGAIILALYTIRT  174 (281)
Q Consensus       143 ~~~v~~~~~---~-~~~-~~~~D~i~s~~i~~~i~~~  174 (281)
                       .|++++..   . ..+ .|..|++++++++.++...
T Consensus       371 -tGv~IAaa~m~lss~tgnPIyD~~GSivvGaLLGmV  406 (503)
T KOG2802|consen  371 -TGVIIAAACMGLSSITGNPIYDSLGSIVVGALLGMV  406 (503)
T ss_pred             -HHHHHHHHHHHHHHhcCCCCccccchHHHHHHHHHH
Confidence             33333322   2 223 5999999999998765443

>COG0053 MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]

Probab=98.09  E-value=2e-05  Score=69.61  Aligned_cols=79  Identities=20%  Similarity=0.251  Sum_probs=69.2

Q ss_pred             hhHHHHHHhcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 023476            5 AAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESLRT   84 (281)
Q Consensus         5 i~~~~~~~~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~esi~~   84 (281)
                      -.+.-.|--+||++|.||+.|+.+|+++++..+.+.. +...       |+..++++++++.+++++..++.+++|++..
T Consensus       135 ~~~~~~~kk~~S~aL~Ada~h~~sD~~ts~~~lvgl~-~~~~-------g~~~lD~i~a~~I~~~Il~~~~~~~~~s~~~  206 (304)
T COG0053         135 RYLRRVGKKTNSQALIADALHHRSDVLTSLAVLVGLL-GSLL-------GWPWLDPLAALLISLYILKTGFRLFKESVNE  206 (304)
T ss_pred             HHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHH-HHHh-------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3445567779999999999999999999999999987 4442       6888999999999999999999999999999


Q ss_pred             hhcCCcc
Q 023476           85 LVSNEDQ   91 (281)
Q Consensus        85 l~~~~~~   91 (281)
                      |++...+
T Consensus       207 L~d~~~~  213 (304)
T COG0053         207 LMDAALD  213 (304)
T ss_pred             HhCcCCC
Confidence            9995553

>TIGR01297 CDF cation diffusion facilitator family transporter

Probab=97.81  E-value=9.7e-05  Score=64.03  Aligned_cols=72  Identities=24%  Similarity=0.347  Sum_probs=65.3

Q ss_pred             HHhcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 023476           11 SVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESLRTLVSNED   90 (281)
Q Consensus        11 ~~~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~esi~~l~~~~~   90 (281)
                      |...+|.++.+|+.|++.|+++++..+.+...+.        ||+..+|++++++.+++++..++.+++++...+++..+
T Consensus       118 ~~~~~s~~l~a~~~~~~~D~~~s~~vli~~~~~~--------~~~~~~D~l~~i~i~~~i~~~~~~l~~~~~~~Ll~~~~  189 (268)
T TIGR01297       118 GHRLGSLALRAAALHVLSDALSSVGVLIGALLIY--------FGWHWADPIAALLISLLILYTAFRLLKESINVLLDAAP  189 (268)
T ss_pred             CccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            3458899999999999999999999999887774        46778999999999999999999999999999999776

This model describes a broadly distributed family of transporters, a number of which have been shown to transport divalent cations of cobalt, cadmium and/or zinc. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.

>PRK09509 fieF ferrous iron efflux protein F; Reviewed

Probab=97.80  E-value=0.00015  Score=63.98  Aligned_cols=73  Identities=18%  Similarity=0.089  Sum_probs=64.8

Q ss_pred             HHHhcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 023476           10 ASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESLRTLVSNE   89 (281)
Q Consensus        10 ~~~~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~esi~~l~~~~   89 (281)
                      .+..++|.++.+|+.|+..|+++++..+.+...+.        +|+..+|++++++.+++++..++.++++++..|++..
T Consensus       138 ~~~~~~s~~l~a~~~~~~~D~~~s~~vl~~~~~~~--------~g~~~~D~i~aiii~~~il~~~~~i~~~~~~~Ll~~~  209 (299)
T PRK09509        138 VVRKTQSQAVRADMLHYQSDVMMNGAILLALGLSW--------YGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRA  209 (299)
T ss_pred             HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence            34468999999999999999999998888877653        3777899999999999999999999999999999876


Q ss_pred             c
Q 023476           90 D   90 (281)
Q Consensus        90 ~   90 (281)
                      +
T Consensus       210 ~  210 (299)
T PRK09509        210 L  210 (299)
T ss_pred             C
Confidence            5

>PRK03557 zinc transporter ZitB; Provisional

Probab=97.10  E-value=0.003  Score=56.15  Aligned_cols=70  Identities=19%  Similarity=0.230  Sum_probs=60.8

Q ss_pred             cchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 023476           14 SGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESLRTLVSNED   90 (281)
Q Consensus        14 ~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~esi~~l~~~~~   90 (281)
                      .+|.++.+|+.|...|+++++..+++......       .|+.-++++.+++.+++++..++.++++++..+++..+
T Consensus       148 ~~s~~l~a~~~h~~~D~l~s~~vlv~~~~~~~-------~g~~~~Dpi~~ilis~~i~~~~~~l~~~~~~~Lld~~p  217 (312)
T PRK03557        148 EKNLNVRAAALHVLGDLLGSVGAIIAALIIIW-------TGWTPADPILSILVSVLVLRSAWRLLKESVNELLEGAP  217 (312)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------cCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence            57899999999999999999988888765543       14445999999999999999999999999999998766

>KOG1485 consensus Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]

Probab=95.45  E-value=0.046  Score=49.53  Aligned_cols=74  Identities=22%  Similarity=0.299  Sum_probs=66.0

Q ss_pred             HHHHhcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 023476            9 YASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESLRTLVSN   88 (281)
Q Consensus         9 ~~~~~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~esi~~l~~~   88 (281)
                      ..+..++|..++|-|+|-.+|+++..+++.+...+..-.        .-+++++++++++.++..++.-..+++..|++.
T Consensus       249 ~c~~~~ns~iv~a~A~dHr~D~lTn~vaLva~~la~~~~--------~~lDP~gailVS~~ii~t~~~t~~~~i~~Lvg~  320 (412)
T KOG1485|consen  249 YCAIKTNSNIVRANAWDHRNDVLTNSVALVAASLAYYYN--------YWLDPIGAILVSTYIIYTGGRTGLENIKELVGR  320 (412)
T ss_pred             HHHHhcCcHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhh--------hcccchhhhhhheehhhhhhHHHHHHHHHHhCC
Confidence            345668999999999999999999999999999887643        458999999999999999999999999999986


Q ss_pred             Cc
Q 023476           89 ED   90 (281)
Q Consensus        89 ~~   90 (281)
                      .-
T Consensus       321 ~a  322 (412)
T KOG1485|consen  321 SA  322 (412)
T ss_pred             CC
Confidence            44

>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B

Probab=95.05  E-value=0.29  Score=35.36  Aligned_cols=72  Identities=11%  Similarity=0.069  Sum_probs=56.3

Q ss_pred             HHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCCCCC--HHHHHHHHHHHHHHHhcCCCceeEEEEeeccC
Q 023476          197 QKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMP--LQEAHDIGESLQEKLELLPEIERAFVHLDYEY  270 (281)
Q Consensus       197 ~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~~~~--~~~~~~i~~~i~~~l~~~~~i~~v~i~iep~~  270 (281)
                      .+|++++.+ +|++..-..+.+.+.|..-.+.+.++..++.+  ..+..++++++++.+++.-++. +.|++-|.+
T Consensus         7 ~~Ie~vl~~-~~~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lgv~-~~V~lv~~g   80 (96)
T PF14535_consen    7 SQIEEVLRE-FPEVSPEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLGVR-PEVELVPPG   80 (96)
T ss_dssp             HHHHHHHCT-STTEEEEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHSS--EEEEEE-TT
T ss_pred             HHHHHHHHh-CcCCCCcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcCce-EEEEEECCC
Confidence            578888876 79988777888988888788889999988764  4678889999999998655764 677777764

>PF03780 Asp23: Asp23 family; InterPro: IPR005531 This entry represents the alkaline shock protein 23 family

Probab=94.17  E-value=0.74  Score=33.78  Aligned_cols=53  Identities=23%  Similarity=0.364  Sum_probs=39.0

Q ss_pred             eEEEEEe-cCeEEEEEEEEcCCCCCHHH-HHHHHHHHHHHHhcCC--CceeEEEEee
Q 023476          215 TVRAYTF-GSHYFVEVDIVLPASMPLQE-AHDIGESLQEKLELLP--EIERAFVHLD  267 (281)
Q Consensus       215 ~~~~~~~-g~~~~v~~~i~v~~~~~~~~-~~~i~~~i~~~l~~~~--~i~~v~i~ie  267 (281)
                      .+++... +....+++++.+..+.++.+ +.++++++++.+++..  .+.++.|+++
T Consensus        49 ~v~v~~~~~~~i~v~l~v~v~~g~~i~~v~~~iq~~V~~~v~~~tg~~v~~V~V~V~  105 (108)
T PF03780_consen   49 GVKVEVDEDGGITVDLHVVVEYGVNIPEVAEEIQEKVKEAVEEMTGIEVSEVNVHVE  105 (108)
T ss_pred             CeEEEEccCcceEEEEEEEEECCccHHHHHHHHHHHHHHHHHHHHCCeeEEEEEEEE
Confidence            3566655 66799999999988887554 7888888888887643  4556777665

These small proteins are involved in alkaline pH tolerance of Staphylococcus aureus [,].

>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]

Probab=93.23  E-value=2.3  Score=37.40  Aligned_cols=67  Identities=19%  Similarity=0.210  Sum_probs=53.3

Q ss_pred             hCCHHHHHhHHhhhHHHHHHHHHHHHHHHHhh-------h-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 023476          123 FTNEIVKAYAQDHFFDVITNIIGLVAVLLANY-------I-DDWMDPVGAIILALYTIRTWSMTVLENVNSLVGR  189 (281)
Q Consensus       123 ~~s~~l~a~~~~~~~D~~~s~~~v~~~~~~~~-------~-~~~~D~i~s~~i~~~i~~~~~~~~~~~~~~Ll~~  189 (281)
                      .+|.++-+|+.|.++|++.-.++.++..+...       | ++.+..+++++=+++++..+.-++.|++..+...
T Consensus        45 s~SlaLLADa~Hml~D~~al~lal~A~~~a~r~~~~~~TfGy~R~eiLaa~~nav~Li~~s~~I~~EAi~R~~~P  119 (296)
T COG1230          45 TGSLALLADALHMLSDALALLLALIAIKLARRPATKRFTFGYKRLEILAAFLNALLLIVVSLLILWEAIQRLLAP  119 (296)
T ss_pred             hccHHHHHhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            48999999999999999975444444433321       2 4678999999999999999999999999999853

>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]

Probab=92.27  E-value=5.3  Score=32.41  Aligned_cols=104  Identities=10%  Similarity=0.148  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHHHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhC-CHHHHHhHHhhhHHHHHHHHHHHH
Q 023476           70 MATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRAFT-NEIVKAYAQDHFFDVITNIIGLVA  148 (281)
Q Consensus        70 ll~~~~~~~~esi~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-s~~l~a~~~~~~~D~~~s~~~v~~  148 (281)
                      +++.|+..+.+++..++..... ..   .....+..++++....+.+++|..|.+ +...+.-.+....-+..+...=++
T Consensus       102 Ll~lg~~aLlsgitaff~~nA~-~~---GlItlll~a~vgGfamy~my~y~yr~~ad~sqr~~~~K~~lv~~~sm~lWi~  177 (226)
T COG4858         102 LLFLGAMALLSGITAFFQKNAQ-VY---GLITLLLTAVVGGFAMYIMYYYAYRMRADNSQRPGTWKYLLVAVLSMLLWIA  177 (226)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCc-ch---hHHHHHHHHHhhhHHHHHHHHHHHHhhcccccCCchHHHHHHHHHHHHHHHH
Confidence            4556666677777888876642 11   123345566677777778887765532 222333233333222222111111


Q ss_pred             HHHHhhh-----ccchhHHHHHHHHHHHHHHHHH
Q 023476          149 VLLANYI-----DDWMDPVGAIILALYTIRTWSM  177 (281)
Q Consensus       149 ~~~~~~~-----~~~~D~i~s~~i~~~i~~~~~~  177 (281)
                      .++...+     .+.+||+.-.+++..++..=+-
T Consensus       178 v~i~t~~lPtslN~~L~pi~l~IiGav~lalRfy  211 (226)
T COG4858         178 VMIATVFLPTSLNPQLPPIALTIIGAVILALRFY  211 (226)
T ss_pred             HHHHHhhCCCcCCcCCchHHHHHHHHHHHHHHHH
Confidence            1111111     4789999999998887765553

>PF01545 Cation_efflux: Cation efflux family; InterPro: IPR002524 Members of this family are integral membrane proteins, that are found to increase tolerance to divalent metal ions such as cadmium, zinc, and cobalt

Probab=91.79  E-value=0.081  Score=46.05  Aligned_cols=69  Identities=26%  Similarity=0.317  Sum_probs=56.6

Q ss_pred             hHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 023476           16 SLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESLRTLVSNED   90 (281)
Q Consensus        16 S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~esi~~l~~~~~   90 (281)
                      |.++.+++.|++.|.+.++..+.+.......+..  +    -+|++.+++.+++++..+..++.++...+++..+
T Consensus       134 s~~l~~~~~~~~~d~~~s~~v~i~~~~~~~~~~~--~----~~D~v~~l~i~~~i~~~~~~~~~~~~~~Ll~~~~  202 (284)
T PF01545_consen  134 SPALRADALHSLIDVLSSLAVLISLLLAYLGPWF--W----YADPVASLLIALFILYSGYPLIKESIRILLDASP  202 (284)
T ss_dssp             SHHHHHHHHHHHHHTS-SSTS-SSSTSSSTT-ST--S-----SSHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SH
T ss_pred             cccchhhhhhcccchhHHHHHHHHHHHHHHHhcc--c----ccchhhhhHHHHHHhhhhhhchhhhhcccccccc
Confidence            9999999999999999998888887766654311  1    3899999999999999999999999999998765

These proteins are considered to be efflux pumps that remove these ions from cells [, ], however others are implicated in ion uptake []. The family has six predicted transmembrane domains. Members of the family are variable in length because of variably sized inserts, often containing low-complexity sequence.; GO: 0008324 cation transmembrane transporter activity, 0006812 cation transport, 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3BYP_B 3BYR_A 3H90_B 2QFI_B 2ZZT_A.

>PRK14637 hypothetical protein; Provisional

Probab=90.42  E-value=3.1  Score=32.82  Aligned_cols=87  Identities=13%  Similarity=0.108  Sum_probs=64.2

Q ss_pred             CHHHHHHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhcCCCceeEEEEeeccCC
Q 023476          192 APEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYT  271 (281)
Q Consensus       192 ~~~~~~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~~~~~~~~~~i~~~i~~~l~~~~~i~~v~i~iep~~~  271 (281)
                      +-...+.++..+.+  -| .++.|+...+.|+...+.+.|.-+..+++++-.++.+.|...|.......+-++++-..+-
T Consensus         7 ~~~~~~~v~p~~~~--~g-~eLvdve~~~~~~~~~lrV~ID~~~gV~iddC~~vSr~Is~~LD~~~~~~~y~LEVSSPGl   83 (151)
T PRK14637          7 DLGYFSECEPVVEG--LG-CKLVDLSRRVQQAQGRVRAVIYSAGGVGLDDCARVHRILVPRLEALGGVRDVFLEVSSPGI   83 (151)
T ss_pred             cccHHHHHHHHHHh--cC-CEEEEEEEEecCCCcEEEEEEECCCCCCHHHHHHHHHHHHHHhcccccccCcEEEEeCCCC
Confidence            33456677777765  45 4578999999998888888888888899999999999998888642223445777777776


Q ss_pred             CCCcccccCC
Q 023476          272 HRPEHAQAHY  281 (281)
Q Consensus       272 ~~~~~~~~~~  281 (281)
                      +.|=.++.||
T Consensus        84 dRpL~~~~~f   93 (151)
T PRK14637         84 ERVIKNAAEF   93 (151)
T ss_pred             CCCCCCHHHH
Confidence            6666666554

>PRK14647 hypothetical protein; Provisional

Probab=89.64  E-value=5.3  Score=31.74  Aligned_cols=84  Identities=15%  Similarity=0.147  Sum_probs=59.2

Q ss_pred             HHHHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhcCCCc-eeEEEEeeccCCCC
Q 023476          195 YLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEI-ERAFVHLDYEYTHR  273 (281)
Q Consensus       195 ~~~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~~~~~~~~~~i~~~i~~~l~~~~~i-~~v~i~iep~~~~~  273 (281)
                      +.+.++..+.+  .| ..+.++.+.+.|+...+.+.|.-+...++++-.++.+.|...|.....+ ..-++++-..+-+.
T Consensus        10 i~~~i~~~~~~--~G-~~L~dv~~~~~~~~~~lrV~ID~~~gvslddC~~vSr~is~~LD~~d~i~~~Y~LEVSSPG~~R   86 (159)
T PRK14647         10 VTELAEQVLSS--LG-LELVELEYKREGREMVLRLFIDKEGGVNLDDCAEVSRELSEILDVEDFIPERYTLEVSSPGLDR   86 (159)
T ss_pred             HHHHHHHHHHH--CC-CEEEEEEEEecCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHcccccCCCCeEEEEcCCCCCC
Confidence            33344444543  35 4577999998888888888888888899999999999999999632122 23467777766666


Q ss_pred             CcccccCC
Q 023476          274 PEHAQAHY  281 (281)
Q Consensus       274 ~~~~~~~~  281 (281)
                      |=.++.||
T Consensus        87 pL~~~~~f   94 (159)
T PRK14647         87 PLKKEADY   94 (159)
T ss_pred             cCCCHHHH
Confidence            66666664

>COG0779 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=89.52  E-value=4.6  Score=31.86  Aligned_cols=84  Identities=13%  Similarity=0.153  Sum_probs=61.4

Q ss_pred             HHHHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHh-cCCCceeEEEEeeccCCCC
Q 023476          195 YLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLE-LLPEIERAFVHLDYEYTHR  273 (281)
Q Consensus       195 ~~~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~~~~~~~~~~i~~~i~~~l~-~~~~i~~v~i~iep~~~~~  273 (281)
                      ..+-++..+++  .| .++.++...+.|+...+.+.+.=+.++++++-.++.+++...|. +.|-...-++++...+-+.
T Consensus        10 v~~liep~~~~--lG-~ELv~ve~~~~~~~~~lrI~id~~g~v~lddC~~vSr~is~~LD~edpi~~~Y~LEVSSPGldR   86 (153)
T COG0779          10 VTELIEPVVES--LG-FELVDVEFVKEGRDSVLRIYIDKEGGVTLDDCADVSRAISALLDVEDPIEGAYFLEVSSPGLDR   86 (153)
T ss_pred             HHHHHHHhHhh--cC-cEEEEEEEEEcCCCcEEEEEeCCCCCCCHHHHHHHHHHHHHHhccCCcccccEEEEeeCCCCCC
Confidence            33444444433  44 55789999999999999999988899999999999999999996 3433335567777776666


Q ss_pred             CcccccCC
Q 023476          274 PEHAQAHY  281 (281)
Q Consensus       274 ~~~~~~~~  281 (281)
                      |=.+..||
T Consensus        87 pL~~~~~f   94 (153)
T COG0779          87 PLKTAEHF   94 (153)
T ss_pred             CcCCHHHH
Confidence            65555554

>PRK14634 hypothetical protein; Provisional

Probab=88.93  E-value=5.5  Score=31.54  Aligned_cols=85  Identities=11%  Similarity=0.092  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCCC--CCHHHHHHHHHHHHHHHhcCCCc-eeEEEEeeccC
Q 023476          194 EYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPAS--MPLQEAHDIGESLQEKLELLPEI-ERAFVHLDYEY  270 (281)
Q Consensus       194 ~~~~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~~--~~~~~~~~i~~~i~~~l~~~~~i-~~v~i~iep~~  270 (281)
                      .+.+.++..+.+  .| .++.++.+.+.|+...+.+.|.-+.+  .++++-.++.+.+...|.....+ ..=++++...+
T Consensus         8 ~i~~l~~~~~~~--~G-~elvdve~~~~~~~~~lrV~ID~~~g~~v~lddC~~vSr~is~~LD~~d~i~~~Y~LEVSSPG   84 (155)
T PRK14634          8 DLETLASATAAD--KG-FELCGIQVLTHLQPMTLQVQIRRSSGSDVSLDDCAGFSGPMGEALEASQLLTEAYVLEISSPG   84 (155)
T ss_pred             HHHHHHHHHHHH--cC-CEEEEEEEEeCCCCcEEEEEEECCCCCcccHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCC
Confidence            334444444443  45 44789999998888888999987777  99999999999999999632221 23467777776


Q ss_pred             CCCCcccccCC
Q 023476          271 THRPEHAQAHY  281 (281)
Q Consensus       271 ~~~~~~~~~~~  281 (281)
                      -+.|=.++.||
T Consensus        85 ldRpL~~~~~f   95 (155)
T PRK14634         85 IGDQLSSDRDF   95 (155)
T ss_pred             CCCcCCCHHHH
Confidence            66666556554

>PRK00092 ribosome maturation protein RimP; Reviewed

Probab=88.88  E-value=6.3  Score=31.09  Aligned_cols=84  Identities=8%  Similarity=0.079  Sum_probs=60.0

Q ss_pred             HHHHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhcCCC-ceeEEEEeeccCCCC
Q 023476          195 YLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPE-IERAFVHLDYEYTHR  273 (281)
Q Consensus       195 ~~~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~~~~~~~~~~i~~~i~~~l~~~~~-i~~v~i~iep~~~~~  273 (281)
                      +.+.++..+.+  .| ..+.++.+.+.|+...+.+.|.-+.+.++++-.++.+.+...|..... -..-++++-..+-+.
T Consensus         9 i~~~~~~~~~~--~g-~~l~dv~~~~~~~~~~l~V~Id~~~gv~iddc~~~Sr~is~~LD~~d~i~~~Y~LEVSSPGi~R   85 (154)
T PRK00092          9 LTELIEPVVEA--LG-YELVDVEYVKEGRDSTLRIYIDKEGGIDLDDCEEVSRQISAVLDVEDPIPGAYTLEVSSPGLDR   85 (154)
T ss_pred             HHHHHHHHHHH--CC-CEEEEEEEEecCCCcEEEEEEECCCCCCHHHHHHHHHHHHHHhccccCCCCCeEEEEeCCCCCC
Confidence            34444555543  35 448899999988888888888887889999999999999999963221 124467777777676


Q ss_pred             CcccccCC
Q 023476          274 PEHAQAHY  281 (281)
Q Consensus       274 ~~~~~~~~  281 (281)
                      |=.++.||
T Consensus        86 pL~~~~~f   93 (154)
T PRK00092         86 PLKKARDF   93 (154)
T ss_pred             cCCCHHHH
Confidence            66666664

>PRK14638 hypothetical protein; Provisional

Probab=88.73  E-value=6.6  Score=30.90  Aligned_cols=84  Identities=10%  Similarity=0.070  Sum_probs=59.1

Q ss_pred             HHHHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCCC-CCHHHHHHHHHHHHHHHhcC-CCceeEEEEeeccCCC
Q 023476          195 YLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPAS-MPLQEAHDIGESLQEKLELL-PEIERAFVHLDYEYTH  272 (281)
Q Consensus       195 ~~~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~~-~~~~~~~~i~~~i~~~l~~~-~~i~~v~i~iep~~~~  272 (281)
                      +.+.++..+.+  .| ..+.++...+.|+...+.+.|.-+.. +++++-.++.+.+...|... +--..=++++...+-+
T Consensus        10 i~~~~~~i~~~--~G-~elvdve~~~~~~~~~lrV~ID~~~G~v~lddC~~vSr~is~~LD~~d~i~~~Y~LEVSSPGld   86 (150)
T PRK14638         10 VRKEAERIAEE--QG-LEIFDVQYRRESRGWVLRIIIDNPVGYVSVRDCELFSREIERFLDREDLIEHSYTLEVSSPGLD   86 (150)
T ss_pred             HHHHHHHHHHH--cC-CEEEEEEEEecCCCcEEEEEEECCCCCcCHHHHHHHHHHHHHHhccccccCCceEEEEeCCCCC
Confidence            34445555543  45 45779999988888888888887655 99999999999999999632 2112346777777766


Q ss_pred             CCcccccCC
Q 023476          273 RPEHAQAHY  281 (281)
Q Consensus       273 ~~~~~~~~~  281 (281)
                      .|=.++.||
T Consensus        87 RpL~~~~~f   95 (150)
T PRK14638         87 RPLRGPKDY   95 (150)
T ss_pred             CCCCCHHHH
Confidence            666666664

>PRK14635 hypothetical protein; Provisional

Probab=88.35  E-value=5  Score=31.99  Aligned_cols=70  Identities=17%  Similarity=0.161  Sum_probs=53.0

Q ss_pred             ceeeeEEEEEecCeEEEEEEEEc----CCCCCHHHHHHHHHHHHHHHhc-CCCceeEEEEeeccCCCCCcccccCC
Q 023476          211 RHIDTVRAYTFGSHYFVEVDIVL----PASMPLQEAHDIGESLQEKLEL-LPEIERAFVHLDYEYTHRPEHAQAHY  281 (281)
Q Consensus       211 ~~i~~~~~~~~g~~~~v~~~i~v----~~~~~~~~~~~i~~~i~~~l~~-~~~i~~v~i~iep~~~~~~~~~~~~~  281 (281)
                      .++.++.+.+.|+...+.+.|.-    ++..++++-.++.+.+...|.. .+ ...-++++-..+-+.|=.++.||
T Consensus        20 ~el~dve~~~~~~~~~lrV~ID~~~~~~~gv~lddC~~vSr~is~~LD~~d~-~~~Y~LEVSSPGldRpL~~~~~~   94 (162)
T PRK14635         20 VKLYSLKVNQRPNHSLIEVVLDNLEHPYGSVSLLECEQVSRKLKEELERISP-DLDFTLKVSSAGAERKLRLPEDL   94 (162)
T ss_pred             CEEEEEEEEecCCCcEEEEEEecCCCCCCCcCHHHHHHHHHHHHHHhCCCCC-CCCeEEEEcCCCCCCcCCCHHHH
Confidence            45779999888888888888864    3458999999999999999964 33 35667777777766666666664

>PRK14640 hypothetical protein; Provisional

Probab=88.23  E-value=7.2  Score=30.74  Aligned_cols=84  Identities=12%  Similarity=0.131  Sum_probs=58.8

Q ss_pred             HHHHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhcC-CCceeEEEEeeccCCCC
Q 023476          195 YLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELL-PEIERAFVHLDYEYTHR  273 (281)
Q Consensus       195 ~~~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~~~~~~~~~~i~~~i~~~l~~~-~~i~~v~i~iep~~~~~  273 (281)
                      +.+.++..+.+  .| .++.++...+.|+...+.+.|.-+...++++-.++.+.+...|... +--..=++++-..+-+.
T Consensus         8 i~~li~p~~~~--~G-~el~dve~~~~~~~~~lrV~ID~~~gv~lddC~~vSr~is~~LD~~d~i~~~Y~LEVSSPGl~R   84 (152)
T PRK14640          8 LTDLLEAPVVA--LG-FELWGIEFIRAGKHSTLRVYIDGENGVSVENCAEVSHQVGAIMDVEDPITEEYYLEVSSPGLDR   84 (152)
T ss_pred             HHHHHHHHHHh--cC-CEEEEEEEEecCCCcEEEEEEECCCCCCHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCCCCC
Confidence            33444444443  35 4578999998888888888888777899999999999999999632 21123467777776666


Q ss_pred             CcccccCC
Q 023476          274 PEHAQAHY  281 (281)
Q Consensus       274 ~~~~~~~~  281 (281)
                      |=.++.||
T Consensus        85 pL~~~~~f   92 (152)
T PRK14640         85 PLFKVAQF   92 (152)
T ss_pred             cCCCHHHH
Confidence            66666554

>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis

Probab=88.12  E-value=4.2  Score=32.70  Aligned_cols=70  Identities=11%  Similarity=0.212  Sum_probs=53.5

Q ss_pred             CHHHHHHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhc-CCCceeEEEEeecc
Q 023476          192 APEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLEL-LPEIERAFVHLDYE  269 (281)
Q Consensus       192 ~~~~~~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~~~~~~~~~~i~~~i~~~l~~-~~~i~~v~i~iep~  269 (281)
                      ..+.-+++.+.+.+ ++|   |.+..+.-.|...+|.+.+.-. .   ....++.++|++.+++ .|++.+|.|.-+|.
T Consensus        73 ~~~~a~~i~~~v~~-~~~---V~~A~vvv~~~~a~Vav~~~~~-~---~~~~~i~~~V~~~v~~~~p~~~~V~Vs~D~~  143 (177)
T PF09580_consen   73 RQQLADRIANRVKK-VPG---VEDATVVVTDDNAYVAVDLDFN-R---FNTKKIKKKVEKAVKSADPRIYNVYVSTDPD  143 (177)
T ss_pred             HHHHHHHHHHHHhc-CCC---ceEEEEEEECCEEEEEEEeccc-c---cchhHHHHHHHHHHHHhCCCccEEEEEcCHH
Confidence            34566777777765 666   5577888889999998888833 2   2357899999999986 78989999988875

Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.

>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family

Probab=87.71  E-value=5  Score=31.87  Aligned_cols=71  Identities=14%  Similarity=0.181  Sum_probs=51.6

Q ss_pred             HHHHHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhc-CCCceeEEEEeeccC
Q 023476          194 EYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLEL-LPEIERAFVHLDYEY  270 (281)
Q Consensus       194 ~~~~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~~~~~~~~~~i~~~i~~~l~~-~~~i~~v~i~iep~~  270 (281)
                      +.-++|.+.+.+ +|+   +++..+.-.|...+|.+.+.-.  ..-...+++.+++.+.+++ .|.+.+|.|.-+|+.
T Consensus        54 ~~A~~Ia~~v~~-v~~---V~dA~vvVtg~~A~Vgv~~~~~--~~~~~~~~iK~~Va~~Vk~~dp~~~~VyVsaDpd~  125 (158)
T TIGR02898        54 DVADEIASEAAK-VKG---VKDATVVITGNYAYVGVDLTNG--LEGSVTDELKEKVAETVKSTDNRIANVYVSADPDT  125 (158)
T ss_pred             HHHHHHHHHHhc-CCC---CceEEEEEECCEEEEEEEcCCC--cchhhHHHHHHHHHHHHHhhCCCcceEEEEcCHHH
Confidence            344555555544 555   6688888889988877765543  3334568899999999987 899999999988863

YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.

>PRK14630 hypothetical protein; Provisional

Probab=87.21  E-value=9.1  Score=29.83  Aligned_cols=84  Identities=8%  Similarity=0.048  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhcC-CCceeEEEEeeccCC
Q 023476          193 PEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELL-PEIERAFVHLDYEYT  271 (281)
Q Consensus       193 ~~~~~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~~~~~~~~~~i~~~i~~~l~~~-~~i~~v~i~iep~~~  271 (281)
                      ++..+.++..+.+  -| .++.++...+.|+...+.+.|.-+..+++++-.++.+.+...+.+. ++  .=++++-..+-
T Consensus         8 ~~i~~li~~~~~~--~G-~eLvdve~~~~~~~~~lrV~Id~~~gV~idDC~~vSr~i~~~ld~~i~~--~Y~LEVSSPGl   82 (143)
T PRK14630          8 SEVYNLIKNVTDR--LG-IEIIEINTFRNRNEGKIQIVLYKKDSFGVDTLCDLHKMILLILEAVLKY--NFSLEISTPGI   82 (143)
T ss_pred             HHHHHHHHHHHHH--cC-CEEEEEEEEecCCCcEEEEEEECCCCCCHHHHHHHHHHHHHHhcccCCC--CeEEEEeCCCC
Confidence            3455556666654  45 4577999888787777888888888899999999999998888652 23  33566666666


Q ss_pred             CCCcccccCC
Q 023476          272 HRPEHAQAHY  281 (281)
Q Consensus       272 ~~~~~~~~~~  281 (281)
                      +.|=.++.||
T Consensus        83 dRpL~~~~df   92 (143)
T PRK14630         83 NRKIKSDREF   92 (143)
T ss_pred             CCcCCCHHHH
Confidence            6665555554

>PRK05783 hypothetical protein; Provisional

Probab=86.18  E-value=9.6  Score=26.80  Aligned_cols=62  Identities=16%  Similarity=0.233  Sum_probs=40.9

Q ss_pred             HHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHH-hcCCCceeEEEEeec
Q 023476          197 QKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKL-ELLPEIERAFVHLDY  268 (281)
Q Consensus       197 ~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~~~~~~~~~~i~~~i~~~l-~~~~~i~~v~i~iep  268 (281)
                      +.|++.+.+  -|...+.++|+   |.  ++++.+.-+   +.+++.+..+++.+.| -..|-+.+.+|.+++
T Consensus        21 ~aI~~aL~~--lg~~~V~~VRv---GK--~iel~l~~~---~~e~a~~~v~~mc~~LrLaNpVIe~y~i~~~~   83 (84)
T PRK05783         21 ETIQRYVIE--RYTGNIIEVRA---GK--YLVFKIEAN---SPEEAKELALKIAREGRLYNPIVHKIVVRVRR   83 (84)
T ss_pred             HHHHHHHHH--cCCCCcceEEe---eE--EEEEEEcCC---CHHHHHHHHHHHHHhcCcCCceeEEEEEEEEe
Confidence            456777754  24445666665   43  344444333   5577888888998888 667899888887765

>PRK14633 hypothetical protein; Provisional

Probab=85.97  E-value=12  Score=29.39  Aligned_cols=84  Identities=5%  Similarity=0.048  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhc-CCCceeEEEEeeccCCC
Q 023476          194 EYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLEL-LPEIERAFVHLDYEYTH  272 (281)
Q Consensus       194 ~~~~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~~~~~~~~~~i~~~i~~~l~~-~~~i~~v~i~iep~~~~  272 (281)
                      ++.+.++..+.+  .| .++.++.+.+.|. ..+.+.|.-+.++++++-.++.+.|...|.. .+--..=++++-..+-+
T Consensus         5 ~i~~lv~p~~~~--~G-~eL~dve~~~~~~-~~lrV~ID~~~Gv~lddC~~vSr~i~~~LD~~d~i~~~Y~LEVSSPGld   80 (150)
T PRK14633          5 DLYEIVEPITAD--LG-YILWGIEVVGSGK-LTIRIFIDHENGVSVDDCQIVSKEISAVFDVEDPVSGKYILEVSSPGMN   80 (150)
T ss_pred             HHHHHHHHHHHH--CC-CEEEEEEEEeCCC-cEEEEEEeCCCCCCHHHHHHHHHHHHHHhccCcCCCCCeEEEEeCCCCC
Confidence            344555555544  45 4477888877666 5788888878889999999999999999963 22222446777776666


Q ss_pred             CCcccccCC
Q 023476          273 RPEHAQAHY  281 (281)
Q Consensus       273 ~~~~~~~~~  281 (281)
                      .|=.++.||
T Consensus        81 RpL~~~~~f   89 (150)
T PRK14633         81 RQIFNIIQA   89 (150)
T ss_pred             CCCCCHHHH
Confidence            666555554

>KOG1484 consensus Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]

Probab=85.54  E-value=26  Score=31.29  Aligned_cols=87  Identities=14%  Similarity=0.167  Sum_probs=64.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCHHHHHhHHhhhHHHHHHHHHHHHHHHHhhh--------ccchhHHHHHHHHHHHHH
Q 023476          102 VVGIMLSVTLVKLLLVVYCRAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYI--------DDWMDPVGAIILALYTIR  173 (281)
Q Consensus       102 ~~~~~~~~~~~~~~l~~~~~~~~s~~l~a~~~~~~~D~~~s~~~v~~~~~~~~~--------~~~~D~i~s~~i~~~i~~  173 (281)
                      .+..........+...+|....+|..+.+++.|...|-....+++.+..+..+-        ...+...+++.=+++...
T Consensus        37 if~f~llnl~~~fv~l~y~~~snSlgLiSda~hm~FDctal~~gL~a~~is~~~~~~~fsyG~~r~evLagF~n~vflvl  116 (354)
T KOG1484|consen   37 IFLFLLLNLAFMFVELFYGSWSNSLGLISDAFHMFFDCTALLAGLYASVISKWPANDKFSYGYGRIEVLAGFVNGVFLVL  116 (354)
T ss_pred             hHHHHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHhhhhHHHHhcCCCccccCcchhHHHHHHHHHHHHHHHH
Confidence            334444555555566666777889999999999999998866666666555431        135677777777888999


Q ss_pred             HHHHHHHHHHHHhhC
Q 023476          174 TWSMTVLENVNSLVG  188 (281)
Q Consensus       174 ~~~~~~~~~~~~Ll~  188 (281)
                      .+.-+.+|++..|++
T Consensus       117 ~a~fi~~Es~eRl~~  131 (354)
T KOG1484|consen  117 IAFFIFSESVERLFD  131 (354)
T ss_pred             HHHHHhHHHHHHhcC
Confidence            999999999999986

>PRK14639 hypothetical protein; Provisional

Probab=85.36  E-value=8.8  Score=29.80  Aligned_cols=73  Identities=12%  Similarity=0.108  Sum_probs=55.0

Q ss_pred             CCcceeeeEEEEEecCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhcC-CCceeEEEEeeccCCCCCcccccCC
Q 023476          208 KSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELL-PEIERAFVHLDYEYTHRPEHAQAHY  281 (281)
Q Consensus       208 ~~v~~i~~~~~~~~g~~~~v~~~i~v~~~~~~~~~~~i~~~i~~~l~~~-~~i~~v~i~iep~~~~~~~~~~~~~  281 (281)
                      .| .++.|+...+.|....+.+.|.-+...++++-.++.+.|.+.|... +--..-++++...+-+.|=.++.||
T Consensus        10 ~G-~eLvdve~~~~~~~~~lrV~Id~~~gv~iddC~~vSr~is~~LD~~d~i~~~Y~LEVSSPGl~RpL~~~~~f   83 (140)
T PRK14639         10 CG-VSFYDDELVSENGRKIYRVYITKEGGVNLDDCERLSELLSPIFDVEPPVSGEYFLEVSSPGLERKLSKIEHF   83 (140)
T ss_pred             CC-CEEEEEEEEecCCCcEEEEEEeCCCCCCHHHHHHHHHHHHHHhccccccCCCeEEEEeCCCCCCcCCCHHHH
Confidence            35 4577999888888888899998888899999999999999999632 2222447777777766666555554

>PRK14646 hypothetical protein; Provisional

Probab=84.59  E-value=12  Score=29.64  Aligned_cols=83  Identities=8%  Similarity=0.025  Sum_probs=56.4

Q ss_pred             HHHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCC--CCCHHHHHHHHHHHHHHHhcCCCc-eeEEEEeeccCCC
Q 023476          196 LQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPA--SMPLQEAHDIGESLQEKLELLPEI-ERAFVHLDYEYTH  272 (281)
Q Consensus       196 ~~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~--~~~~~~~~~i~~~i~~~l~~~~~i-~~v~i~iep~~~~  272 (281)
                      .+.++..+.+  -| .++.++...+.|....+.+.|.-+.  ++++++-.++.+.+...|.....+ ..=++++...+-+
T Consensus        10 ~~li~p~~~~--~G-~eLvdve~~~~~~~~~LrV~IDk~~g~gVtldDC~~vSr~is~~LD~~D~i~~~Y~LEVSSPGld   86 (155)
T PRK14646         10 EILLEKVANE--FD-LKICSLNIQTNQNPIVIKIIIKKTNGDDISLDDCALFNTPASEEIENSNLLNCSYVLEISSQGVS   86 (155)
T ss_pred             HHHHHHHHHH--cC-CEEEEEEEEeCCCCeEEEEEEECCCCCCccHHHHHHHHHHHHHHhCcCCCCCCCeEEEEcCCCCC
Confidence            3334444433  34 5578999999988888888887753  489999999999999999532121 2346677766666


Q ss_pred             CCcccccCC
Q 023476          273 RPEHAQAHY  281 (281)
Q Consensus       273 ~~~~~~~~~  281 (281)
                      .|=.++.||
T Consensus        87 RpL~~~~df   95 (155)
T PRK14646         87 DELTSERDF   95 (155)
T ss_pred             CcCCCHHHH
Confidence            665555554

>PRK14641 hypothetical protein; Provisional

Probab=83.03  E-value=16  Score=29.47  Aligned_cols=71  Identities=14%  Similarity=0.093  Sum_probs=51.4

Q ss_pred             ceeeeEEEEEecCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhcCCCc-----eeEEEEeeccCCCCCcccccCC
Q 023476          211 RHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEI-----ERAFVHLDYEYTHRPEHAQAHY  281 (281)
Q Consensus       211 ~~i~~~~~~~~g~~~~v~~~i~v~~~~~~~~~~~i~~~i~~~l~~~~~i-----~~v~i~iep~~~~~~~~~~~~~  281 (281)
                      ..+.++.+.+.|+...+.+.|.-+.+.++++-.++.+.|...|.....+     ..=++++-..+-+.|=.++.||
T Consensus        24 ~eLvdve~~~~~~~~~lrV~ID~~~gv~lDdC~~vSr~Is~~LD~~d~i~~~~~~~Y~LEVSSPGldRpL~~~~~f   99 (173)
T PRK14641         24 VYLVSMTVKGSGKGRKIEVLLDADTGIRIDQCAFFSRRIRERLEEDEELLGLVGEDFDLMVSSPGLGEPIILPRQY   99 (173)
T ss_pred             eEEEEEEEEeCCCCcEEEEEEeCCCCCCHHHHHHHHHHHHHHhCcccccccCCCCCeEEEEeCCCCCCcCCCHHHH
Confidence            4577899888888888888888777899999999999999999632111     2345666666655555555554

>COG1302 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=82.38  E-value=20  Score=27.46  Aligned_cols=71  Identities=20%  Similarity=0.221  Sum_probs=46.6

Q ss_pred             HHHHHHHHHhhcCCCcceeeeEEEEEe-cCeEEEEEEEEcCCCCCHHH-HHHHHHHHHHHHhcCC--CceeEEEEeecc
Q 023476          195 YLQKLTYLCWNHHKSIRHIDTVRAYTF-GSHYFVEVDIVLPASMPLQE-AHDIGESLQEKLELLP--EIERAFVHLDYE  269 (281)
Q Consensus       195 ~~~~i~~~i~~~~~~v~~i~~~~~~~~-g~~~~v~~~i~v~~~~~~~~-~~~i~~~i~~~l~~~~--~i~~v~i~iep~  269 (281)
                      ..+.+.+.+..  +++.  +.+.+..- +....+++++.++-..++-+ ++++.+.++..+++.-  .+..+.||+.--
T Consensus        40 ~~~~~~e~l~~--~n~~--kGV~Ve~~~~~~v~VDvyi~v~YGv~IpeVa~~Iq~~V~~~v~~mtgl~v~~VNV~V~gV  114 (131)
T COG1302          40 FKDGLTEKLGK--ENVT--KGVKVEVGEDQSVAVDVYIIVEYGVKIPEVAENIQERVKEEVENMTGLKVVEVNVHVVGV  114 (131)
T ss_pred             hhhhHHHHhCc--cccC--CCeEEEecCCCcEEEEEEEEEecCCchHHHHHHHHHHHHHHHHHhhCCceEEEEEEEEEe
Confidence            55556665522  2322  35566663 44599999999998877544 7888888888887654  445677766544

>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae

Probab=80.81  E-value=17  Score=25.55  Aligned_cols=47  Identities=19%  Similarity=0.191  Sum_probs=31.4

Q ss_pred             HhhhHHHHHHHHHHHHHHHHhhhccchhHHH---HHHHHHHHHHHHHHHH
Q 023476          133 QDHFFDVITNIIGLVAVLLANYIDDWMDPVG---AIILALYTIRTWSMTV  179 (281)
Q Consensus       133 ~~~~~D~~~s~~~v~~~~~~~~~~~~~D~i~---s~~i~~~i~~~~~~~~  179 (281)
                      .+-..|.+-++++.+.+.+.....+.+||+.   -+..+...++-+++.+
T Consensus        32 v~Rd~D~~fs~vgLl~g~IL~~~gwRldp~ll~~Q~l~~~~~i~f~~e~i   81 (84)
T PF07444_consen   32 VSRDYDIFFSSVGLLYGLILWFQGWRLDPILLFGQMLLVGLLIFFGWETI   81 (84)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence            3445677777788888877766678899994   4445555555555543

It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	281
3h90_A	283	Ferrous-iron efflux pump FIEF; membrane protein, z	7e-38
2zzt_A	107	Putative uncharacterized protein; cation diffusion	2e-11
3byp_A	94	CZRB protein; membrane protein, zinc transporter,	8e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04

>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A Length = 283

 Score =  133 bits (338), Expect = 7e-38
 Identities = 54/271 (19%), Positives = 118/271 (43%), Gaps = 12/271 (4%)

Query: 2   VLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFI-LWFTAFSMQTPNPYQYPIGKKRMQP 60
           +L   K++A   +GS++I+A+ +DSL+D+ +    L    +S+Q  +   +  G  + + 
Sbjct: 15  LLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADD-NHSFGHGKAES 73

Query: 61  LGILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC 120
           L  L  +  ++   L + L  ++ L+S               V + +   +  ++LV + 
Sbjct: 74  LAALAQSMFISGSALFLFLTGIQHLISPT-----PMTDPGVGVIVTIVALICTIILVSFQ 128

Query: 121 RAFTNEI----VKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWS 176
           R          V+A    +  DV+ N   L+A+ L+ Y     D + A+ + +Y + +  
Sbjct: 129 RWVVRRTQSQAVRADMLHYQSDVMMNGAILLALGLSWYGWHRADALFALGIGIYILYSAL 188

Query: 177 MTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPAS 236
               E V SL+ R+   E  Q++  +       +     +R    G   F+++ + +  S
Sbjct: 189 RMGYEAVQSLLDRALPDEERQEIIDIV-TSWPGVSGAHDLRTRQSGPTRFIQIHLEMEDS 247

Query: 237 MPLQEAHDIGESLQEKLELLPEIERAFVHLD 267
           +PL +AH + + +++ +          +H D
Sbjct: 248 LPLVQAHMVADQVEQAILRRFPGSDVIIHQD 278

>2zzt_A Putative uncharacterized protein; cation diffusion facilitator (CDF), transporter, zinc, membrane protein, cytosolic domain; 2.84A {Thermotoga maritima} Length = 107

 Score = 58.6 bits (142), Expect = 2e-11
 Identities = 14/63 (22%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 206 HHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKL-ELLPEIERAFV 264
              ++ +   VR    G+ YF+E+DI +   M +++AH++   +++++ +   +IE   +
Sbjct: 21  RFPNVHNPHRVRIRRVGTKYFIEMDIEVDGKMSVKDAHELTVKIRKEMLKRRDDIEDVTI 80

Query: 265 HLD 267
           H++
Sbjct: 81  HVE 83

>3byp_A CZRB protein; membrane protein, zinc transporter, transport protein; 1.70A {Thermus thermophilus} SCOP: d.52.9.1 PDB: 3byr_A Length = 94

 Score = 56.6 bits (137), Expect = 8e-11
 Identities = 18/97 (18%), Positives = 42/97 (43%), Gaps = 9/97 (9%)

Query: 186 LVGRSAAPEYLQKLTYLCWNHHKS-IRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHD 244
           L+     PE ++++        +     +  ++    G   F+E  +V+    P++EAH 
Sbjct: 2   LMDEGLPPEEVERIRAFLQERIRGRALEVHDLKTRRAGPRSFLEFHLVVRGDTPVEEAHR 61

Query: 245 IGESLQEKL-ELLPEIERAFVHLDYEYTHRPEHAQAH 280
           + + L+  L +  P ++ A +H++      PE  +  
Sbjct: 62  LCDELERALAQAFPGLQ-ATIHVE------PEGERKR 91

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 5e-04
 Identities = 37/320 (11%), Positives = 80/320 (25%), Gaps = 88/320 (27%)

Query: 13  KSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMAT 72
           K+  +A+       +   +   I W               +      P  +L    ++  
Sbjct: 163 KT-WVALDVCLSYKVQCKMDFKIFWLN-------------LKNCN-SPETVL---EMLQK 204

Query: 73  LGLQIILESLRTLVSNEDQFNLTKEQ-EQWVVGIMLSVTLVKLLLV---VYCRAFTNEIV 128
           L  QI   +  +   +     L     +  +  ++ S      LLV   V       +  
Sbjct: 205 LLYQID-PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQ----NAKAW 259

Query: 129 KAYAQDHFFD------VITNIIGLVAVLLANY-----IDDWMDPV----GAIILALYTIR 173
            A      F+      + T    +   L A       +D     +       +L  Y   
Sbjct: 260 NA------FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYL-- 311

Query: 174 TWSMTVLE------NVN----SLVGRS-----AAPEYLQKLTYLCWNHHKSIRH-IDTVR 217
                  +        N    S++  S     A  +  +     C      I   ++ + 
Sbjct: 312 --DCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKH--VNCDKLTTIIESSLNVLE 367

Query: 218 AYTFGSHY-----FVE-VDI---VLP---ASMPLQEAHDIGESLQEK--LELLPEIERAF 263
              +   +     F     I   +L      +   +   +   L +   +E  P+     
Sbjct: 368 PAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS 427

Query: 264 VH---LDYEYTHRPEHAQAH 280
           +    L+ +          H
Sbjct: 428 IPSIYLELK-VKLENEYALH 446

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	281
3j1z_P	306	YIIP, cation efflux family protein; zinc transport	100.0
3h90_A	283	Ferrous-iron efflux pump FIEF; membrane protein, z	100.0
3byp_A	94	CZRB protein; membrane protein, zinc transporter,	99.65
2zzt_A	107	Putative uncharacterized protein; cation diffusion	99.57
3j1z_P	306	YIIP, cation efflux family protein; zinc transport	96.67
3h90_A	283	Ferrous-iron efflux pump FIEF; membrane protein, z	96.48
1ib8_A	164	Conserved protein SP14.3; nucleic acid binding pro	88.22
3cq1_A	103	Putative uncharacterized protein TTHB138; DTDP-4-k	81.28

>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis}

Probab=100.00  E-value=4.3e-55  Score=384.61  Aligned_cols=264  Identities=19%  Similarity=0.241  Sum_probs=242.1

Q ss_pred             hhhhhHHHHHHhcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 023476            2 VLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILES   81 (281)
Q Consensus         2 ~~~i~~~~~~~~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~es   81 (281)
                      +++++|+++|+++||.||++||+|++.|+++.++++++.+.++||+|++|||||+|+|++++++++++++++++++++|+
T Consensus        24 ~l~~~k~~ag~~sgS~ALlaDa~hsl~D~~s~~i~l~~~~~s~k~~d~~~pyG~~R~E~l~al~~~~~l~~~~~~i~~ea  103 (306)
T 3j1z_P           24 TLITIKLLAWLYSGSASMLASLTDSFADTLASIINFIAIRYAIVPADHDHRYGHGKAEPLAALAQSAFIMGSAFLLLFYG  103 (306)
T ss_dssp             HHTHHHHHTCTTSSSSCCCTHHHHTTHHHHHHHHHHHHHHHHTSCCCCTTSSCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            57889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH----hCCHHHHHhHHhhhHHHHHHHHHHHHHHHHhhh-c
Q 023476           82 LRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRA----FTNEIVKAYAQDHFFDVITNIIGLVAVLLANYI-D  156 (281)
Q Consensus        82 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~s~~l~a~~~~~~~D~~~s~~~v~~~~~~~~~-~  156 (281)
                      ++++++|++.     +...++++++.++.+.+..++++.++    .+|.++++++.|+++|+++| ++++++.++.++ |
T Consensus       104 i~~l~~p~~~-----~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~~l~a~~~h~~~D~l~s-~~vli~~~~~~~g~  177 (306)
T 3j1z_P          104 GERLLNPSPV-----ENATLGVVVSVVAIVLTLALVLLQKRALAATNSTVVEADSLHYKSDLFLN-AAVLLALVLSQYGW  177 (306)
T ss_dssp             HHTTTTTCCG-----GGTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHTTCC-TTCCCTTSSCCSSS
T ss_pred             hhheecCCCc-----cccccchhhhhhHhhhhHHHHHHHHHhccccCCHHHHHHHHhhcchhhhh-hHHHHHHHHHHhCc
Confidence            9999998872     33455667777888888888888754    57899999999999999997 666666655555 7


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCCC
Q 023476          157 DWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPAS  236 (281)
Q Consensus       157 ~~~D~i~s~~i~~~i~~~~~~~~~~~~~~Ll~~~~~~~~~~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~~  236 (281)
                      +|+||++++++++++++.+++++|++...|+|++||++..++|++.+++ .|||.++||+|+|+.|+++++++|+++|++
T Consensus       178 ~~~Dpi~ai~Ia~~I~~~~~~l~~~s~~~Ll~~~~~~~~~~~I~~~i~~-~~~V~~vh~l~~~~~G~~~~v~~hi~v~~~  256 (306)
T 3j1z_P          178 WWADGLFAVLIACYIGQQAFDLGYRSIQALLDRELDEDTRQRIKLIAKE-DPRVLGLHDLRTRQAGKTVFIQFHLELDGN  256 (306)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH-STTBCCCCCBCCEEETTEEEEEECCEECTT
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHhc-CCCcceeeeEEEEEECCcEEEEEEEEECCC
Confidence            9999999999999999999999999999999999999999999999987 899999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHhcCCCceeEEEEeeccCCC
Q 023476          237 MPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYTH  272 (281)
Q Consensus       237 ~~~~~~~~i~~~i~~~l~~~~~i~~v~i~iep~~~~  272 (281)
                      +|++|+|++.++++++|++.+++.+++||+||...+
T Consensus       257 ~sl~eah~i~~~ie~~l~~~~~~~~v~IhveP~~~e  292 (306)
T 3j1z_P          257 LSLNEAHSITDTTGLRVKAAFEDAEVIIHQDPVQVE  292 (306)
T ss_dssp             SBHHHHHHHHHHHHHHHHHHSTTCEEEECCEETTSC
T ss_pred             CCHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCCCCC
Confidence            999999999999999998756778999999998643

>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A

Probab=100.00  E-value=1.8e-54  Score=377.34  Aligned_cols=263  Identities=19%  Similarity=0.234  Sum_probs=240.0

Q ss_pred             hhhhhHHHHHHhcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 023476            2 VLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILES   81 (281)
Q Consensus         2 ~~~i~~~~~~~~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~es   81 (281)
                      +++++|+++|+++||.||++||+|++.|+++.++++++.+.++||+|++|||||+|+|+++++++++++++.++++++|+
T Consensus        15 ~l~~~k~~~g~~t~S~allaDa~hsl~D~~~~~~~l~~~~~s~~~~d~~~pyG~~r~E~l~~l~~~~~l~~~~~~i~~ea   94 (283)
T 3h90_A           15 LLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMFISGSALFLFLTG   94 (283)
T ss_dssp             TTHHHHHHSSCSSSSSCCCSTTTHHHHHHHHHHHHHHHHHHHTCCCCSSCSSCSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH----hCCHHHHHhHHhhhHHHHHHHHHHHHHHHHhhh-c
Q 023476           82 LRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCRA----FTNEIVKAYAQDHFFDVITNIIGLVAVLLANYI-D  156 (281)
Q Consensus        82 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~s~~l~a~~~~~~~D~~~s~~~v~~~~~~~~~-~  156 (281)
                      ++++++|++.     ...+++++++.++.++|.+++++.+|    .+|+++++++.|+++|+++| +++++++++.++ |
T Consensus        95 i~~l~~~~~~-----~~~~~~l~v~~~s~~v~~~~~~~~~~~~~~~~s~~l~a~~~h~~~D~~~s-~~vli~~~~~~~g~  168 (283)
T 3h90_A           95 IQHLISPTPM-----TDPGVGVIVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMMN-GAILLALGLSWYGW  168 (283)
T ss_dssp             HHTSSSSCCC-----CCCCCCTHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCCC-SCSCSSSCSCSTTS
T ss_pred             HHHHcCCCCC-----CcchHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCc
Confidence            9999998762     22345667788888899988888654    58999999999999999997 666666555555 6


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCCC
Q 023476          157 DWMDPVGAIILALYTIRTWSMTVLENVNSLVGRSAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPAS  236 (281)
Q Consensus       157 ~~~D~i~s~~i~~~i~~~~~~~~~~~~~~Ll~~~~~~~~~~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~~  236 (281)
                      +|+||++++++++++++.+++++|++.+.|+|++||++..+++++.+++ .|||.++||+|+|+.|+++++++|++++++
T Consensus       169 ~~~D~i~~i~ia~~i~~~~~~l~~~s~~~Ll~~~~~~~~~~~i~~~i~~-~~~V~~v~~l~~~~~G~~~~v~~hv~v~~~  247 (283)
T 3h90_A          169 HRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEIIDIVTS-WPGVSGAHDLRTRQSGPTRFIQIHLEMEDS  247 (283)
T ss_dssp             CCSTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH-SSSCSEEEEEEEEEETTEEEEEEEEECCTT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhc-CCCcccceeeEEEEECCcEEEEEEEEeCCC
Confidence            8999999999999999999999999999999999999999999999987 899999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHHHhcCCCceeEEEEeeccCC
Q 023476          237 MPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYT  271 (281)
Q Consensus       237 ~~~~~~~~i~~~i~~~l~~~~~i~~v~i~iep~~~  271 (281)
                      ++++|+|++++++++.+++..+..++|||+||+..
T Consensus       248 ~~~~~~~~i~~~i~~~l~~~~~~~~v~ih~ep~~~  282 (283)
T 3h90_A          248 LPLVQAHMVADQVEQAILRRFPGSDVIIHQDPCSV  282 (283)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHSTTCEEEEEEECSCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCC
Confidence            99999999999999999753344799999999864

>3byp_A CZRB protein; membrane protein, zinc transporter, transport protein; 1.70A {Thermus thermophilus} SCOP: d.52.9.1 PDB: 3byr_A

Probab=99.65  E-value=1.1e-15  Score=110.48  Aligned_cols=84  Identities=20%  Similarity=0.395  Sum_probs=73.3

Q ss_pred             HhhCCCCCHHHHHHHHHHHhhcC--CCcceeeeEEEEEecCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhc-CCCcee
Q 023476          185 SLVGRSAAPEYLQKLTYLCWNHH--KSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLEL-LPEIER  261 (281)
Q Consensus       185 ~Ll~~~~~~~~~~~i~~~i~~~~--~~v~~i~~~~~~~~g~~~~v~~~i~v~~~~~~~~~~~i~~~i~~~l~~-~~~i~~  261 (281)
                      .|||.+|+++..++|++.+.+ .  |||.++|++|+|+.|+.+++++|+++++++++.+++++.+++++.|++ ++. .+
T Consensus         1 ~Lld~~~~~~~~~~I~~~l~~-~~~~gV~~vh~l~~~~~g~~~~v~~hi~v~~~~~~~~~h~i~~~ie~~l~~~~~~-~~   78 (94)
T 3byp_A            1 GLMDEGLPPEEVERIRAFLQE-RIRGRALEVHDLKTRRAGPRSFLEFHLVVRGDTPVEEAHRLCDELERALAQAFPG-LQ   78 (94)
T ss_dssp             -----CCCHHHHHHHHHHHHH-HHTTTCSEEEEEEEEEETTEEEEEEEEEECTTCBHHHHHHHHHHHHHHHHHHSTT-EE
T ss_pred             CCcCCCCCHHHHHHHHHHHHh-cCCCCceeeeeEEEEEECCcEEEEEEEEECCCCcHHHHHHHHHHHHHHHHHHCCC-CE
Confidence            478988999999999999987 8  999999999999999999999999999999999999999999999975 554 59


Q ss_pred             EEEEeeccC
Q 023476          262 AFVHLDYEY  270 (281)
Q Consensus       262 v~i~iep~~  270 (281)
                      +|||+||+.
T Consensus        79 vtIh~ep~~   87 (94)
T 3byp_A           79 ATIHVEPEG   87 (94)
T ss_dssp             EEEEEEECC
T ss_pred             EEEEeCCCC
Confidence            999999964

>2zzt_A Putative uncharacterized protein; cation diffusion facilitator (CDF), transporter, zinc, membrane protein, cytosolic domain; 2.84A {Thermotoga maritima}

Probab=99.57  E-value=1e-14  Score=107.75  Aligned_cols=84  Identities=18%  Similarity=0.326  Sum_probs=74.3

Q ss_pred             hCCCCCHH--HHHHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhc-CCCceeEE
Q 023476          187 VGRSAAPE--YLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLEL-LPEIERAF  263 (281)
Q Consensus       187 l~~~~~~~--~~~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~~~~~~~~~~i~~~i~~~l~~-~~~i~~v~  263 (281)
                      ||.+|+++  ..++|++.+.+ .|||.+++++|+|+.|+.+++++||++++++++.+++++.+++++.|++ ++.+.++|
T Consensus         1 md~~~~~~~~~~~~I~~~l~~-~~gV~~vh~lr~r~~G~~~~v~~hI~v~~~~sv~eah~i~~~ie~~L~~~~~~i~~vt   79 (107)
T 2zzt_A            1 MDGMKRTELDMYDDIFAVLER-FPNVHNPHRVRIRRVGTKYFIEMDIEVDGKMSVKDAHELTVKIRKEMLKRRDDIEDVT   79 (107)
T ss_dssp             ---CCHHHHHHHHHHHHHHTT-CSSCEEEEEEEEECSCC-CEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred             CCCCCCccHHHHHHHHHHHHc-CCCccccEEEEEEEECCcEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCcEEE
Confidence            56678888  99999999987 8999999999999999999999999999999999999999999999974 66689999


Q ss_pred             EEeeccCC
Q 023476          264 VHLDYEYT  271 (281)
Q Consensus       264 i~iep~~~  271 (281)
                      ||+||...
T Consensus        80 IhvEp~~~   87 (107)
T 2zzt_A           80 IHVEPLGN   87 (107)
T ss_dssp             EEEEETTC
T ss_pred             EEEecCCC
Confidence            99999864

>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis}

Probab=96.67  E-value=0.00056  Score=59.33  Aligned_cols=70  Identities=17%  Similarity=0.145  Sum_probs=61.5

Q ss_pred             hcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 023476           13 KSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESLRTLVSNED   90 (281)
Q Consensus        13 ~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~esi~~l~~~~~   90 (281)
                      -.+|.++.+|+.|...|+++++..+.+...+.        ||+.-++++++++.+++++..++.++++++..|++..+
T Consensus       143 ~~~s~~l~a~~~h~~~D~l~s~~vli~~~~~~--------~g~~~~Dpi~ai~Ia~~I~~~~~~l~~~s~~~Ll~~~~  212 (306)
T 3j1z_P          143 ATNSTVVEADSLHYKSDLFLNAAVLLALVLSQ--------YGWWWADGLFAVLIACYIGQQAFDLGYRSIQALLDREL  212 (306)
T ss_dssp             TSCCHHHHHHHHHHHHHTTCCTTCCCTTSSCC--------SSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             ccCCHHHHHHHHhhcchhhhhhHHHHHHHHHH--------hCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence            36899999999999999999988777654432        47778999999999999999999999999999998776

>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A

Probab=96.48  E-value=0.00078  Score=57.72  Aligned_cols=70  Identities=17%  Similarity=0.093  Sum_probs=60.8

Q ss_pred             hcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 023476           13 KSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESLRTLVSNED   90 (281)
Q Consensus        13 ~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~esi~~l~~~~~   90 (281)
                      -.+|.++.+|+.|...|+++++..+.+...+        .+|+..++++.+++.+++++..++.++.+++..|++..+
T Consensus       134 ~~~s~~l~a~~~h~~~D~~~s~~vli~~~~~--------~~g~~~~D~i~~i~ia~~i~~~~~~l~~~s~~~Ll~~~~  203 (283)
T 3h90_A          134 RTQSQAVRADMLHYQSDVMMNGAILLALGLS--------WYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRAL  203 (283)
T ss_dssp             HSCCHHHHHHHHHHHHHHCCCSCSCSSSCSC--------STTSCCSTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999999998776665331        237778999999999999999999999999999998766

>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1

Probab=88.22  E-value=2.9  Score=32.25  Aligned_cols=84  Identities=13%  Similarity=0.169  Sum_probs=60.1

Q ss_pred             HHHHHHHhhcC-CCcceeeeEEEEEecCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHh--cCCCc-eeEEEEeeccCCC
Q 023476          197 QKLTYLCWNHH-KSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLE--LLPEI-ERAFVHLDYEYTH  272 (281)
Q Consensus       197 ~~i~~~i~~~~-~~v~~i~~~~~~~~g~~~~v~~~i~v~~~~~~~~~~~i~~~i~~~l~--~~~~i-~~v~i~iep~~~~  272 (281)
                      +++++.+...+ .| .++.++.+.+.|+...+.+.|.-+..+++++-.++.+.+...|.  ....+ ..-++++-..+-+
T Consensus        12 ~~v~~li~p~~~~g-~eLvdve~~~~g~~~~LrV~ID~~~gi~lddC~~vSr~is~~LD~~~~d~i~~~Y~LEVSSPGld   90 (164)
T 1ib8_A           12 ELVREVVEPVIEAP-FELVDIEYGKIGSDMILSIFVDKPEGITLNDTADLTEMISPVLDTIKPDPFPEQYFLEITSPGLE   90 (164)
T ss_dssp             HHHHHHHHHHHCSS-SEEEEEEEEEETTEEEEEEEEECSSCCCHHHHHHHHHHHGGGTTTCCSCCCCSCEEEEEECCSSS
T ss_pred             HHHHHHHHHHHcCC-cEEEEEEEEecCCCcEEEEEEECCCCCCHHHHHHHHHHHHHHhccccccCCCCCeEEEEeCCCCC
Confidence            34444443322 24 56789999999999999999988888999999999999999987  42222 3456777777766


Q ss_pred             CCcccccCC
Q 023476          273 RPEHAQAHY  281 (281)
Q Consensus       273 ~~~~~~~~~  281 (281)
                      .|=.++.||
T Consensus        91 RpL~~~~df   99 (164)
T 1ib8_A           91 RPLKTKDAV   99 (164)
T ss_dssp             SCCSSHHHH
T ss_pred             CCCCCHHHH
Confidence            666555554

>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*

Probab=81.28  E-value=8.5  Score=26.90  Aligned_cols=71  Identities=20%  Similarity=0.240  Sum_probs=42.4

Q ss_pred             HHHHHHHHHhh-cCCCc-ce------eeeEEEEEecCeEEEEEEEEcC-CCCCHHHHHHHHHHHHHHHhcCCCceeEEEE
Q 023476          195 YLQKLTYLCWN-HHKSI-RH------IDTVRAYTFGSHYFVEVDIVLP-ASMPLQEAHDIGESLQEKLELLPEIERAFVH  265 (281)
Q Consensus       195 ~~~~i~~~i~~-~~~~v-~~------i~~~~~~~~g~~~~v~~~i~v~-~~~~~~~~~~i~~~i~~~l~~~~~i~~v~i~  265 (281)
                      ..++|++.+++ ..|+. .+      ++++.+.  |..  +.+.+.++ +.++.  .+.+++++++.+++.+++.++.++
T Consensus         7 ~~~~V~~aL~~V~DPel~~~iv~lG~V~~v~v~--~~~--V~v~l~lt~~~cp~--~~~l~~~i~~al~~l~gv~~V~V~   80 (103)
T 3cq1_A            7 LEAQAWALLEAVYDPELGLDVVNLGLIYDLVVE--PPR--AYVRMTLTTPGCPL--HDSLGEAVRQALSRLPGVEEVEVE   80 (103)
T ss_dssp             HHHHHHHHHTTCBCTTTCSBTTTTTCEEEEEEE--TTE--EEEEECCSSSSCCS--SCHHHHHHHHHHHTSTTCCEEEEE
T ss_pred             HHHHHHHHHhCCCCCCCCcCchhcCceEEEEEE--CCE--EEEEEEECCCCCcH--HHHHHHHHHHHHHhCCCceeEEEE
Confidence            44567777765 12331 12      2333331  333  44444442 33454  468899999999988999988888


Q ss_pred             eeccCC
Q 023476          266 LDYEYT  271 (281)
Q Consensus       266 iep~~~  271 (281)
                      +..+..
T Consensus        81 l~~~p~   86 (103)
T 3cq1_A           81 VTFEPP   86 (103)
T ss_dssp             ECCSSC
T ss_pred             EecCCC
Confidence            776643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	281
d2qfia2	204	f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF {	4e-24
d2qfia1	82	d.52.9.1 (A:209-290) Ferrous-iron efflux pump FieF	2e-17
d3bypa1	82	d.52.9.1 (A:6-87) Putative Zinc transporter CzrB {	5e-15

>d2qfia2 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF {Escherichia coli [TaxId: 562]} Length = 204

class: Membrane and cell surface proteins and peptides
fold: Cation efflux protein transmembrane domain-like
superfamily: Cation efflux protein transmembrane domain-like
family: Cation efflux protein transmembrane domain-like
domain: Ferrous-iron efflux pump FieF
species: Escherichia coli [TaxId: 562]

 Score = 94.5 bits (234), Expect = 4e-24
 Identities = 40/188 (21%), Positives = 83/188 (44%), Gaps = 1/188 (0%)

Query: 2   VLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPL 61
           +L   K++A   +GS++I+A+ +DSL+D+ +             P    +  G  + + L
Sbjct: 18  LLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESL 77

Query: 62  GILVFASVMATLGLQIILESLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYCR 121
             L  +  ++   L + L  ++ L+S     +        +V ++ ++ LV        R
Sbjct: 78  AALAQSMFISGSALFLFLTGIQHLISPTPMTDPGVGVIVTIVALICTIILV-SFQRWVVR 136

Query: 122 AFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYIDDWMDPVGAIILALYTIRTWSMTVLE 181
              ++ V+A    +  DV+ N   L+A+ L+ Y     D + A+ + +Y + +      E
Sbjct: 137 RTQSQAVRADMLHYQSDVMMNGAILLALGLSWYGWHRADALFALGIGIYILYSALRMGYE 196

Query: 182 NVNSLVGR 189
            V SL+ R
Sbjct: 197 AVQSLLDR 204

>d2qfia1 d.52.9.1 (A:209-290) Ferrous-iron efflux pump FieF (YiiP) {Escherichia coli [TaxId: 562]} Length = 82

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Cation efflux protein cytoplasmic domain-like
family: Cation efflux protein cytoplasmic domain-like
domain: Ferrous-iron efflux pump FieF (YiiP)
species: Escherichia coli [TaxId: 562]

 Score = 72.8 bits (179), Expect = 2e-17
 Identities = 12/78 (15%), Positives = 32/78 (41%), Gaps = 1/78 (1%)

Query: 190 SAAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESL 249
           +   E  Q++  +       +     +R    G   F+++ + +  S+PL +AH + + +
Sbjct: 1   ALPDEERQEIIDIV-TSWPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQV 59

Query: 250 QEKLELLPEIERAFVHLD 267
           ++ +          +H D
Sbjct: 60  EQAILRRFPGSDVIIHQD 77

>d3bypa1 d.52.9.1 (A:6-87) Putative Zinc transporter CzrB {Thermus thermophilus [TaxId: 274]} Length = 82

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Cation efflux protein cytoplasmic domain-like
family: Cation efflux protein cytoplasmic domain-like
domain: Putative Zinc transporter CzrB
species: Thermus thermophilus [TaxId: 274]

 Score = 66.7 bits (163), Expect = 5e-15
 Identities = 15/78 (19%), Positives = 35/78 (44%), Gaps = 1/78 (1%)

Query: 193 PEYLQKLTYLCWNHHKS-IRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQE 251
           PE ++++        +     +  ++    G   F+E  +V+    P++EAH + + L+ 
Sbjct: 4   PEEVERIRAFLQERIRGRALEVHDLKTRRAGPRSFLEFHLVVRGDTPVEEAHRLCDELER 63

Query: 252 KLELLPEIERAFVHLDYE 269
            L       +A +H++ E
Sbjct: 64  ALAQAFPGLQATIHVEPE 81

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	281
d2qfia2	204	Ferrous-iron efflux pump FieF {Escherichia coli [T	99.96
d3bypa1	82	Putative Zinc transporter CzrB {Thermus thermophil	99.61
d2qfia1	82	Ferrous-iron efflux pump FieF (YiiP) {Escherichia	99.55
d2qfia2	204	Ferrous-iron efflux pump FieF {Escherichia coli [T	90.77
d1uwda_	102	Hypothetical protein TM0487 {Thermotoga maritima [	86.32
d2cu6a1	91	Hypothetical protein TTHB138 {Thermus thermophilus	85.94
d1ib8a2	90	Hypothetical protein SP14.3 (SP0552) {Streptococcu	82.04

>d2qfia2 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: Cation efflux protein transmembrane domain-like
superfamily: Cation efflux protein transmembrane domain-like
family: Cation efflux protein transmembrane domain-like
domain: Ferrous-iron efflux pump FieF
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=4.3e-36  Score=247.26  Aligned_cols=183  Identities=20%  Similarity=0.241  Sum_probs=157.9

Q ss_pred             ChhhhhHHHHHHhcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHH
Q 023476            1 MVLFAAKVYASVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILE   80 (281)
Q Consensus         1 ~~~~i~~~~~~~~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~e   80 (281)
                      ++++++|+++|+++||+++++|++|++.|+++.++++++.+.++||+|++|||||+|.|++++++++++++++++++++|
T Consensus        17 ~~l~i~~~~~~~~t~S~allada~~s~~D~~~~~~~l~~~~~s~k~~d~~~pyG~~r~E~l~~l~~~~~l~~~~~~~~~~   96 (204)
T d2qfia2          17 SLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMFISGSALFLFLT   96 (204)
T ss_dssp             TTTTTBTTBCCCCTTSSCCCCCCCTTHHHHHHHHHHHHHHTTSSSSCSTTSSCSCCTHHHHHHHTTTTTTSSSTTGGGSS
T ss_pred             HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCccCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCccccccchhhHHHHHHHHHHHHHHHHHHHHH----HHhCCHHHHHhHHhhhHHHHHHHHHHHHHHHHhhh-
Q 023476           81 SLRTLVSNEDQFNLTKEQEQWVVGIMLSVTLVKLLLVVYC----RAFTNEIVKAYAQDHFFDVITNIIGLVAVLLANYI-  155 (281)
Q Consensus        81 si~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~s~~l~a~~~~~~~D~~~s~~~v~~~~~~~~~-  155 (281)
                      +++++++|++.++     ..+++.+.+++..++..+.++.    ||.+|++++++++|++.|.++| ++++++.+..++ 
T Consensus        97 si~~l~~~~~~~~-----~~~~~~v~~~~~~~~~~l~~~~~~~~~~~~s~~~~a~~~~~~~D~~~s-~~vii~~~~~~~~  170 (204)
T d2qfia2          97 GIQHLISPTPMTD-----PGVGVIVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMMN-GAILLALGLSWYG  170 (204)
T ss_dssp             CTTSSTTTSSSST-----TTSCCCCCGGGSSCGGGGTTTHHHHGGGCCSTTSGGGGGGHHHHTCCS-STTCCCTTSSCSS
T ss_pred             HHHHHHhcccccc-----cHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhHHHHHHHHHHHHHH-HHHHHHHHHHHhC
Confidence            9999999877322     2333334444455555554443    4578999999999999999997 566666555554 


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 023476          156 DDWMDPVGAIILALYTIRTWSMTVLENVNSLVGR  189 (281)
Q Consensus       156 ~~~~D~i~s~~i~~~i~~~~~~~~~~~~~~Ll~~  189 (281)
                      |+|+||++++++++++++.+++++|++.++|+|+
T Consensus       171 ~~~~D~i~aiii~~~i~~~~~~~~~~~~~~Lld~  204 (204)
T d2qfia2         171 WHRADALFALGIGIYILYSALRMGYEAVQSLLDR  204 (204)
T ss_dssp             TTSSSSSSHHHHTTTTTTTTTTHHHHTGGGSSCC
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            7899999999999999999999999999999985

>d3bypa1 d.52.9.1 (A:6-87) Putative Zinc transporter CzrB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Cation efflux protein cytoplasmic domain-like
family: Cation efflux protein cytoplasmic domain-like
domain: Putative Zinc transporter CzrB
species: Thermus thermophilus [TaxId: 274]

Probab=99.61  E-value=1.9e-15  Score=104.38  Aligned_cols=78  Identities=21%  Similarity=0.416  Sum_probs=70.9

Q ss_pred             CCHHHHHHHHHHHhhcCCC--cceeeeEEEEEecCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhc-CCCceeEEEEee
Q 023476          191 AAPEYLQKLTYLCWNHHKS--IRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLEL-LPEIERAFVHLD  267 (281)
Q Consensus       191 ~~~~~~~~i~~~i~~~~~~--v~~i~~~~~~~~g~~~~v~~~i~v~~~~~~~~~~~i~~~i~~~l~~-~~~i~~v~i~ie  267 (281)
                      .||+..++|++.+.+ .++  +.++|++|+|+.|+++++++|+++++++|+.++|++.+++++.|++ +|++ +++||+|
T Consensus         2 lp~e~~~~I~~~i~~-~~~~~vv~vh~lr~r~~G~~~~vd~hi~v~~~~sv~~aH~i~~~ve~~i~~~~~~~-~v~vHve   79 (82)
T d3bypa1           2 LPPEEVERIRAFLQE-RIRGRALEVHDLKTRRAGPRSFLEFHLVVRGDTPVEEAHRLCDELERALAQAFPGL-QATIHVE   79 (82)
T ss_dssp             CCHHHHHHHHHHHHH-HHTTTCSEEEEEEEEEETTEEEEEEEEEECTTCBHHHHHHHHHHHHHHHHHHSTTE-EEEEEEE
T ss_pred             cCHHHHHHHHHHHHh-CCCCCceeeeEEEeeEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCC-EEEEEeC
Confidence            588999999999987 674  5599999999999999999999999999999999999999999975 6664 8999999


Q ss_pred             ccC
Q 023476          268 YEY  270 (281)
Q Consensus       268 p~~  270 (281)
                      |++
T Consensus        80 P~g   82 (82)
T d3bypa1          80 PEG   82 (82)
T ss_dssp             ECC
T ss_pred             CCC
Confidence            984

>d2qfia1 d.52.9.1 (A:209-290) Ferrous-iron efflux pump FieF (YiiP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Cation efflux protein cytoplasmic domain-like
family: Cation efflux protein cytoplasmic domain-like
domain: Ferrous-iron efflux pump FieF (YiiP)
species: Escherichia coli [TaxId: 562]

Probab=99.55  E-value=6.8e-17  Score=111.96  Aligned_cols=79  Identities=15%  Similarity=0.220  Sum_probs=73.0

Q ss_pred             CCHHHHHHHHHHHhhcCCCcceeeeEEEEEecCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhcCCCceeEEEEeeccC
Q 023476          191 AAPEYLQKLTYLCWNHHKSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEY  270 (281)
Q Consensus       191 ~~~~~~~~i~~~i~~~~~~v~~i~~~~~~~~g~~~~v~~~i~v~~~~~~~~~~~i~~~i~~~l~~~~~i~~v~i~iep~~  270 (281)
                      +|++..++|++.+.+ .|||.++|++|+|+.|+.+++++|+++++++|++++|++.+++++.|++.++..+++||+||+.
T Consensus         2 lP~e~~~~I~~~i~~-~~gV~~vh~lr~r~~G~~~~vd~hi~v~~~~sv~~aH~I~~~ie~~l~~~~~~~~v~iHveP~~   80 (82)
T d2qfia1           2 LPDEERQEIIDIVTS-WPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPGSDVIIHQDPCS   80 (82)
T ss_dssp             CCTTHHHHHHHHHTT-SSSCSCBCCCCCCTTSCCBCCBSCTTSTTTCSCGGGHHHHHHHHHHTTSSSCCSSCBCCCCCSC
T ss_pred             cCHHHHHHHHHHHHc-CCCceeeeEEEEEEeCCcEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHhCCCCEEEEEeCCcc
Confidence            577889999999987 8999999999999999999999999999999999999999999999986444569999999985

>d2qfia2 f.59.1.1 (A:5-208) Ferrous-iron efflux pump FieF {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: Cation efflux protein transmembrane domain-like
superfamily: Cation efflux protein transmembrane domain-like
family: Cation efflux protein transmembrane domain-like
domain: Ferrous-iron efflux pump FieF
species: Escherichia coli [TaxId: 562]

Probab=90.77  E-value=0.00047  Score=54.15  Aligned_cols=69  Identities=17%  Similarity=0.108  Sum_probs=58.1

Q ss_pred             HHhcchHHHHHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 023476           11 SVKSGSLAIIASTLDSLLDLLSGFILWFTAFSMQTPNPYQYPIGKKRMQPLGILVFASVMATLGLQIILESLRTLVS   87 (281)
Q Consensus        11 ~~~~~S~al~ada~~~~~d~~~~~~~l~~~~~~~~~~~~~~p~G~~r~e~l~~li~~~~ll~~~~~~~~esi~~l~~   87 (281)
                      +--.+|.++.+|+.|+..|+++++..+.+.....        +|+..+|++++++.+++++..++.++.|+++.|++
T Consensus       135 ~~~~~s~~~~a~~~~~~~D~~~s~~vii~~~~~~--------~~~~~~D~i~aiii~~~i~~~~~~~~~~~~~~Lld  203 (204)
T d2qfia2         135 VRRTQSQAVRADMLHYQSDVMMNGAILLALGLSW--------YGWHRADALFALGIGIYILYSALRMGYEAVQSLLD  203 (204)
T ss_dssp             GGGCCSTTSGGGGGGHHHHTCCSSTTCCCTTSSC--------SSTTSSSSSSHHHHTTTTTTTTTTHHHHTGGGSSC
T ss_pred             hcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH--------hCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            4457999999999999999999987766544322        46777999999999999999999999999988875

>d1uwda_ d.52.8.2 (A:) Hypothetical protein TM0487 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Fe-S cluster assembly (FSCA) domain-like
family: PaaD-like
domain: Hypothetical protein TM0487
species: Thermotoga maritima [TaxId: 2336]

Probab=86.32  E-value=1.6  Score=29.11  Aligned_cols=47  Identities=23%  Similarity=0.340  Sum_probs=33.8

Q ss_pred             EEEEEEc-CCCCCHHHHHHHHHHHHHHHhcCCCceeEEEEeeccCCCCCc
Q 023476          227 VEVDIVL-PASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYTHRPE  275 (281)
Q Consensus       227 v~~~i~v-~~~~~~~~~~~i~~~i~~~l~~~~~i~~v~i~iep~~~~~~~  275 (281)
                      +.+.+.+ .+.++.  .+.+++++++.+++.+++.++.|++..+.+-+++
T Consensus        43 V~v~~~lt~~~Cp~--~~~i~~~i~~al~~~~gV~~v~V~i~~~p~W~~~   90 (102)
T d1uwda_          43 VKVLMTMTTPMCPL--AGMILSDAEEAIKKIEGVNNVEVELTFDPPWTPE   90 (102)
T ss_dssp             EEEEECCSSSCCSS--HHHHHHHHHHHHHTSSSCCEEEEEECCSSCCCGG
T ss_pred             eEEEEecCCCCCch--HHHHHHHHHHHHHcCCCCceEEEEEEecCCCChH
Confidence            4444444 334565  4689999999999999999999999776544444

>d2cu6a1 d.52.8.2 (A:6-96) Hypothetical protein TTHB138 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: Fe-S cluster assembly (FSCA) domain-like
family: PaaD-like
domain: Hypothetical protein TTHB138
species: Thermus thermophilus [TaxId: 274]

Probab=85.94  E-value=0.9  Score=29.73  Aligned_cols=47  Identities=23%  Similarity=0.485  Sum_probs=32.5

Q ss_pred             cCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhcCCCceeEEEEeeccCC
Q 023476          222 GSHYFVEVDIVLPASMPLQEAHDIGESLQEKLELLPEIERAFVHLDYEYT  271 (281)
Q Consensus       222 g~~~~v~~~i~v~~~~~~~~~~~i~~~i~~~l~~~~~i~~v~i~iep~~~  271 (281)
                      |.+..+.+.+. .+.++.  .+.+.+++++.+++.+++.+|.|++..+..
T Consensus        35 ~~~v~v~l~lt-~~~cp~--~~~i~~~i~~al~~l~gv~~V~V~~~~~p~   81 (91)
T d2cu6a1          35 PPRAYVRMTLT-TPGCPL--HDSLGEAVRQALSRLPGVEEVEVEVTFEPP   81 (91)
T ss_dssp             TTEEEEEECCS-SSSCCS--SCHHHHHHHHHHHTSTTCCEEEEEECCSSC
T ss_pred             ccccEEEEEcC-CCCCcH--HHHHHHHHHHHHHcCCCCceEEEEEEecCC
Confidence            44444444443 333553  467999999999999999999998866543

>d1ib8a2 d.52.4.1 (A:1-90) Hypothetical protein SP14.3 (SP0552) {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Alpha-lytic protease prodomain-like
superfamily: YhbC-like, N-terminal domain
family: YhbC-like, N-terminal domain
domain: Hypothetical protein SP14.3 (SP0552)
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=82.04  E-value=4.7  Score=26.04  Aligned_cols=59  Identities=12%  Similarity=0.172  Sum_probs=45.7

Q ss_pred             HHHHHHHHHhhcC-CCcceeeeEEEEEecCeEEEEEEEEcCCCCCHHHHHHHHHHHHHHHh
Q 023476          195 YLQKLTYLCWNHH-KSIRHIDTVRAYTFGSHYFVEVDIVLPASMPLQEAHDIGESLQEKLE  254 (281)
Q Consensus       195 ~~~~i~~~i~~~~-~~v~~i~~~~~~~~g~~~~v~~~i~v~~~~~~~~~~~i~~~i~~~l~  254 (281)
                      +.+++++.++..+ .| .++.++.+.+.|+...+.+.|.=+..+++++-.++.+.+...|.
T Consensus        10 i~e~i~~li~pvv~~G-~eL~~ve~~~~~~~~~l~I~ID~~~gv~iddC~~vSr~is~~LD   69 (90)
T d1ib8a2          10 IVELVREVVEPVIEAP-FELVDIEYGKIGSDMILSIFVDKPEGITLNDTADLTEMISPVLD   69 (90)
T ss_dssp             HHHHHHHHHHHHHCSS-SEEEEEEEEEETTEEEEEEEEECSSCCCHHHHHHHHHHHGGGTT
T ss_pred             HHHHHHHHHHHHHhCC-CEEEEEEEEeCCCCEEEEEEEECCCCcCHHHHHHHHHHHHHHhc
Confidence            3445555554311 25 55779999999999999999998889999999999999999885