Citrus Sinensis ID: 023517

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-
Protein Sequence
MMSGGNYTSIDNQKLSGSVPAVPDPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVDDTFSKPASGSSDEAQSSGWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTVTV
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHEEEc
Secondary Structure Prediction (SSPRO)
cccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcEcccccHHHHHHHHHHHccccccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mmsggnytsidnqklsgsvpavpdpgqvtvkfsdsnlqtfppsdtrgkisgvsgppsdvddtfskpasgssdeaqssgWFRAFTVAaykpyfdvdtsdvlerikdslfpfrdtftektsdnpdlygpfwICSTLIFVAASIGTFVTYISHKvnnkdwnydinlvpwsaglfygyVTIVPLCLYIILKYfsapsglvQLFCLYGYslfvfipalclsvvplEIFRWVIAGVAGFMSATFVALNLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTVTV
Flexible Loop (DISEMBL)
mmsggnytsidnqklsgsvpAVPDPGQVTVKFsdsnlqtfppsdtrgkisgvsgppsdVDDTFSKPASgssdeaqssgWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDtftektsdnpdlyGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTVTV
Low Complexity Region (SEG)
MMSGGNYTSIDNQKLSGSVPAVPDPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVDDTFSKPASGSSDEAQSSGWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTVTV
Disordered region (IsUnstruct)
*****************************************************************************GWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTV**
Disordered Region (DISOPRED)
*********************************************************************************AFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTVTV
Disordered Region (DISEMBL)
MMSGGNYTSIDNQKLSGSVPAVPDPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVDD**************SSGWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTVTV
Disordered Region (DISPRO)
******************************************************************************WFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTVTV
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MMSGGNYTSIDNQKLSGSVPAVPDPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVDDTFSKPASGSSDEAQSSGWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTVTV
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	281	2.2.26 [Sep-21-2011]
Q54TS4	347	Protein YIPF1 homolog OS=	yes	no	0.797	0.645	0.337	2e-34
Q6P6G5	306	Protein YIPF1 OS=Rattus n	yes	no	0.690	0.633	0.330	1e-24
Q91VU1	306	Protein YIPF1 OS=Mus musc	yes	no	0.790	0.725	0.320	1e-24
Q9Y548	306	Protein YIPF1 OS=Homo sap	yes	no	0.690	0.633	0.325	2e-24
Q5RBL0	306	Protein YIPF1 OS=Pongo ab	yes	no	0.690	0.633	0.325	6e-24
Q99LP8	312	Protein YIPF2 OS=Mus musc	no	no	0.580	0.522	0.343	4e-21
Q9BWQ6	316	Protein YIPF2 OS=Homo sap	no	no	0.572	0.509	0.347	7e-21
Q5XIT3	311	Protein YIPF2 OS=Rattus n	no	no	0.516	0.466	0.363	4e-20
Q9UTD3	249	Protein YIP5 OS=Schizosac	yes	no	0.822	0.927	0.275	2e-17
P53108	310	Protein YIP5 OS=Saccharom	yes	no	0.871	0.790	0.203	6e-06

>sp|Q54TS4|YIPF1_DICDI Protein YIPF1 homolog OS=Dictyostelium discoideum GN=yipf1 PE=3 SV=1

 Score =  145 bits (367), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 129/231 (55%), Gaps = 7/231 (3%)

Query: 48  KISGVSGPPSDVDDTFSKPASGSSDEAQSSGWFRAFTVAAYKPYFDVDTSDVLERIKDSL 107
           KI G S      ++ FS     +++E  +   +  + V  Y+  F+VDT +V  R+  S+
Sbjct: 96  KIGGNSS-----NNKFSDNVPLNTNEDGTEKKYSFYEVPYYRFLFNVDTKEVGLRLIRSM 150

Query: 108 FPFRDTFTEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWS 167
            P + +F     +NPDLYGPFW+ ++L+F+ A       Y  H  ++K W  DI  + +S
Sbjct: 151 LPIKFSFFNLIRENPDLYGPFWVLTSLVFIVAVTSNLNEYF-HSSDHKSWEVDIQKIVYS 209

Query: 168 AGLFYGYVTIVPLCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVI 227
           A   YGY  ++PL L+ I K+ +    L+ + C+YGY+LF+F+PA  L V+PL++ +W+I
Sbjct: 210 AITIYGYSFVIPLILWGIFKWMNLGLRLLDMLCIYGYTLFIFVPASILCVIPLQLVQWII 269

Query: 228 AGVAGFMSATFVALNLRAHIKSA-GERWFLIVAAIFLLQLALAVALKIYLF 277
             +A  +S  F+  N+   +K    +R  +I A I  L + LA+ LK+Y F
Sbjct: 270 VAIASIVSGLFLVTNIFTPLKEDFTKRGLIICAVIGALHIGLALVLKLYFF 320

Dictyostelium discoideum (taxid: 44689)

>sp|Q6P6G5|YIPF1_RAT Protein YIPF1 OS=Rattus norvegicus GN=Yipf1 PE=2 SV=1

 Score =  113 bits (283), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 109/206 (52%), Gaps = 12/206 (5%)

Query: 83  FTVAAYKPYFDVDTSDVLERIKDSLFPF--RDTFTEKTSDNPDLYGPFWICSTLIFVAAS 140
           +T   Y+ +FDVDT  V +RIK SL P   ++        NPDLYGPFWIC+TL+F  A 
Sbjct: 77  WTFEYYQTFFDVDTYQVFDRIKGSLLPVPGKNFVRLYIRSNPDLYGPFWICATLVFAIAI 136

Query: 141 IGTFVTYISHKVNNKDWNY--DINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPS----- 193
            G    ++ H +  K ++Y  +   V  +A + Y Y  +VPL L+  L + ++       
Sbjct: 137 SGNLSNFLIH-LGEKTYHYVPEFQKVSIAATVIYAYAWLVPLALWGFLLWRNSKVMNIVS 195

Query: 194 -GLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGE 252
              +++ C+YGYSLF++IP   L ++P  + RWV+  +A  +S + +A+     ++    
Sbjct: 196 YSFLEIVCVYGYSLFIYIPTAVLWIIPQRVIRWVLVTIALGISGSVLAMTFWPAVREDNR 255

Query: 253 RWFL-IVAAIFLLQLALAVALKIYLF 277
           R  L  +  I LL + L+V    Y F
Sbjct: 256 RVALATIVTIMLLHVLLSVGCLAYFF 281

Rattus norvegicus (taxid: 10116)

>sp|Q91VU1|YIPF1_MOUSE Protein YIPF1 OS=Mus musculus GN=Yipf1 PE=2 SV=1

 Score =  113 bits (283), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 122/240 (50%), Gaps = 18/240 (7%)

Query: 55  PPSDVDDTFSKPASGSSDEAQS---SGWFRA---FTVAAYKPYFDVDTSDVLERIKDSLF 108
           PP  V     +   G++D  ++   +G  R+   +T   Y+ +FDVDT  V +RIK SL 
Sbjct: 43  PPGSVGREEDEELLGNNDSDETELLAGQKRSSPFWTFEYYQTFFDVDTYQVFDRIKGSLL 102

Query: 109 PF--RDTFTEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNY--DINLV 164
           P   ++        NPDLYGPFWIC+TL+F  A  G    ++ H +  K ++Y  +   V
Sbjct: 103 PVPGKNFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIH-LGEKTYHYVPEFQKV 161

Query: 165 PWSAGLFYGYVTIVPLCLYIIL-----KYFSAPS-GLVQLFCLYGYSLFVFIPALCLSVV 218
             +A + Y Y  +VPL L+  L     K  S  S   +++ C+YGYSLF++IP   L ++
Sbjct: 162 SIAATVIYAYAWLVPLALWGFLLWRNSKVMSMVSYSFLEIVCVYGYSLFIYIPTAVLWII 221

Query: 219 PLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGERWFL-IVAAIFLLQLALAVALKIYLF 277
           P  + RWV+  +A  +S + + +     ++    R  L  +  I LL + L+V    Y F
Sbjct: 222 PQRVVRWVLVMIALGVSGSVLVMTFWPAVREDNRRVALATIVTIVLLHVLLSVGCLAYFF 281

Mus musculus (taxid: 10090)

>sp|Q9Y548|YIPF1_HUMAN Protein YIPF1 OS=Homo sapiens GN=YIPF1 PE=2 SV=1

 Score =  113 bits (282), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 109/206 (52%), Gaps = 12/206 (5%)

Query: 83  FTVAAYKPYFDVDTSDVLERIKDSLFPF--RDTFTEKTSDNPDLYGPFWICSTLIFVAAS 140
           +T   Y+ +FDVDT  V +RIK SL P   ++        NPDLYGPFWIC+TL+F  A 
Sbjct: 77  WTFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNPDLYGPFWICATLVFAIAI 136

Query: 141 IGTFVTYISHKVNNKDWNY--DINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPS----- 193
            G    ++ H +  K ++Y  +   V  +A + Y Y  +VPL L+  L + ++       
Sbjct: 137 SGNLSNFLIH-LGEKTYHYVPEFRKVSIAATIIYAYAWLVPLALWGFLMWRNSKVMNIVS 195

Query: 194 -GLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGE 252
              +++ C+YGYSLF++IP   L ++P +  RW++  +A  +S + +A+     ++    
Sbjct: 196 YSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGISGSLLAMTFWPAVREDNR 255

Query: 253 RWFL-IVAAIFLLQLALAVALKIYLF 277
           R  L  +  I LL + L+V    Y F
Sbjct: 256 RVALATIVTIVLLHMLLSVGCLAYFF 281

Homo sapiens (taxid: 9606)

>sp|Q5RBL0|YIPF1_PONAB Protein YIPF1 OS=Pongo abelii GN=YIPF1 PE=2 SV=1

 Score =  111 bits (277), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 12/206 (5%)

Query: 83  FTVAAYKPYFDVDTSDVLERIKDSLFPF--RDTFTEKTSDNPDLYGPFWICSTLIFVAAS 140
           +T   Y+ +FDVDT  V +RIK SL P   ++        NPDLYGPFWIC+TL+F  A 
Sbjct: 77  WTFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNPDLYGPFWICATLVFAIAI 136

Query: 141 IGTFVTYISHKVNNKDWNY--DINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPS----- 193
            G    ++ H +  K + Y  +   V  +A   Y Y  +VPL L+  L + ++       
Sbjct: 137 SGNLSNFLIH-LGEKTYRYVPEFRKVSIAATTIYAYAWLVPLALWGFLMWRNSKVMNIVS 195

Query: 194 -GLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGE 252
              +++ C+YGYSLF++IP   L ++P +  RW++  +A  +S + +A+     ++    
Sbjct: 196 YSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGISGSVLAMTFWPAVREDNR 255

Query: 253 RWFL-IVAAIFLLQLALAVALKIYLF 277
           R  L  +  I LL + L+V    Y F
Sbjct: 256 RVALATIVTIVLLHMLLSVGCLAYFF 281

Pongo abelii (taxid: 9601)

>sp|Q99LP8|YIPF2_MOUSE Protein YIPF2 OS=Mus musculus GN=Yipf2 PE=2 SV=1

 Score =  102 bits (253), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 92/172 (53%), Gaps = 9/172 (5%)

Query: 81  RAFTVAAYKPYFDVDTSDVLERIKDSLFPF--RDTFTEKTSDNPDLYGPFWICSTLIFVA 138
           R +T   Y+ +FDVDTS VL+RIK SL P    +       + PDLYGPFWIC+TL FV 
Sbjct: 73  RFWTFDYYQSFFDVDTSQVLDRIKGSLLPHPGHNFVRHHLRNRPDLYGPFWICATLAFVL 132

Query: 139 ASIGTFVTYISHKVN-NKDWNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPSGLVQ 197
           A  G     ++ + + +  ++   + V  +    Y Y  +VPL L+  L++       + 
Sbjct: 133 AVTGNLTLVLAQRRDPSIHYSPQFHKVTIAGITIYCYAWLVPLALWGFLRWRQGTRERMG 192

Query: 198 LF------CLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNL 243
           L+      C+YGYSLFVFIP + L ++P++  +W+   +   +SA  +   L
Sbjct: 193 LYTFLETVCVYGYSLFVFIPTVVLWLIPVQWIQWLFGALGLALSAAGLVFTL 244

Mus musculus (taxid: 10090)

>sp|Q9BWQ6|YIPF2_HUMAN Protein YIPF2 OS=Homo sapiens GN=YIPF2 PE=2 SV=1

 Score =  101 bits (251), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 83  FTVAAYKPYFDVDTSDVLERIKDSLFPF--RDTFTEKTSDNPDLYGPFWICSTLIFVAAS 140
           +T + Y+ +FDVDTS VL+RIK SL P    +       + PDLYGPFWIC+TL FV A 
Sbjct: 78  WTFSYYQSFFDVDTSQVLDRIKGSLLPRPGHNFVRHHLRNRPDLYGPFWICATLAFVLAV 137

Query: 141 IGTFVTYISHKVNNK-DWNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSA------PS 193
            G     ++ + +    ++   + V  +    Y Y  +VPL L+  L++         P 
Sbjct: 138 TGNLTLVLAQRRDPSIHYSPQFHKVTVAGISIYCYAWLVPLALWGFLRWRKGVQERMGPY 197

Query: 194 GLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNL 243
             ++  C+YGYSLFVFIP + L ++P+   +W+   +A  +SA  +   L
Sbjct: 198 TFLETVCIYGYSLFVFIPMVVLWLIPVPWLQWLFGALALGLSAAGLVFTL 247

Homo sapiens (taxid: 9606)

>sp|Q5XIT3|YIPF2_RAT Protein YIPF2 OS=Rattus norvegicus GN=Yipf2 PE=2 SV=1

 Score = 98.6 bits (244), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 85/154 (55%), Gaps = 9/154 (5%)

Query: 81  RAFTVAAYKPYFDVDTSDVLERIKDSLFPF--RDTFTEKTSDNPDLYGPFWICSTLIFVA 138
           R +T   Y+ +FDVDTS VL+RIK SL P    +       + PDLYGPFWIC+TL FV 
Sbjct: 72  RFWTFDYYQSFFDVDTSQVLDRIKGSLLPHPGHNFVRHHLRNRPDLYGPFWICATLAFVL 131

Query: 139 ASIGTFVTYISHKVN-NKDWNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPSGLVQ 197
           A  G     ++ + + +  ++   + V  +    Y Y  +VPL L+  L++       + 
Sbjct: 132 AVTGNLTLVLAQRRDPSIHYSPQFHKVTIAGITIYCYAWLVPLALWGFLRWRQGTRERMG 191

Query: 198 LF------CLYGYSLFVFIPALCLSVVPLEIFRW 225
           L+      C+YGYSLFVFIP + L ++P++  +W
Sbjct: 192 LYTFLETVCVYGYSLFVFIPTVVLWLIPVQWLQW 225

Rattus norvegicus (taxid: 10116)

>sp|Q9UTD3|YIP5_SCHPO Protein YIP5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yip5 PE=3 SV=1

 Score = 90.1 bits (222), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 117/254 (46%), Gaps = 23/254 (9%)

Query: 33  SDSNLQTFPPSDTRGKISGVSGPPSDVDDTFSKPASGSSDEAQSSGWFRAFTVAAYKPYF 92
           +D    TF   D   + + ++ PP+      S+ AS      Q + W         K  F
Sbjct: 11  ADLGRTTFEAEDLYKQRTPITKPPAPRLQ--SRRAS-----MQETPW-------TIKDSF 56

Query: 93  DVDTSDVLERIKDSLFPFRDTFTEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKV 152
           +V+T DV++R   +L P  + F +   D PDLYGPFWI +T+I       +   Y  +  
Sbjct: 57  NVETKDVVQRCIHTLIPTVNFF-DVVDDRPDLYGPFWITTTVIQALFFSNSITEYARYAT 115

Query: 153 NNKDWNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPA 212
            +    Y I  +  +A + YGY TI+ + L+ IL +      L+   CLYGY+  V++P 
Sbjct: 116 GHGTSGYSIKKLISAASIIYGYTTIIAVLLWGILVWNKCNPKLLDCLCLYGYANIVWLPV 175

Query: 213 L-------CLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGERWF-LIVAAIFLL 264
                    LS +   I ++V+ G+   +S  F+  NL    + AG     L++  I + 
Sbjct: 176 SLATPPFGLLSTLASHIVKYVLTGIGLLISIVFLTRNLYPICQQAGSNLCKLLLFGIIVF 235

Query: 265 QLALAVALKIYLFT 278
              LA++L++  F+
Sbjct: 236 HCLLALSLQLIFFS 249

Possible role in vesicle-mediated transport. May be involved in proper membrane localization of Rab GTPases.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P53108|YIP5_YEAST Protein YIP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIP5 PE=1 SV=1

 Score = 51.6 bits (122), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/275 (20%), Positives = 103/275 (37%), Gaps = 30/275 (10%)

Query: 17  GSVPAVPDPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVDDTFSKPASGSSDEAQS 76
            +VP  P+    T         T         + G   PP+     + +    + ++   
Sbjct: 31  ATVPDSPNMNNSTAGKGSEFYNTTGSKAESAPLQGQMDPPA-----YDQVIGQNDNDGLG 85

Query: 77  SGWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEKTSDNPDLYGPFWICSTLIF 136
               R   +  Y  YF +D +   +R+   L    D  +E   DN DLYG  WI +T++ 
Sbjct: 86  RNGLRPGLINYYSKYFQIDLTQFKKRLSAVLTFRNDHNSESNEDNTDLYGAVWITATVVM 145

Query: 137 VAASIGTFVTY-ISHKVNNKDWNYDINLVPW------SAGLFYGYVTIVPLCLYIILKYF 189
           +  ++   + + IS  +       DI+          S  LFYGY   VP     +L   
Sbjct: 146 INFTMSRGLNFIISDVIEGVKTGEDIDRASQFKKLLHSIWLFYGYTFGVPFITMQVLNRD 205

Query: 190 SAPS------GLVQLFCLYGYSLFVFIP-ALCLSVVPL-------EIFRWVIAGVAGFMS 235
                      + +L  +YGY+  ++IP  + L+++ +       +  +W I  +    S
Sbjct: 206 EHSERNRSFKSVPELISVYGYANLIWIPVCVILNILDMSKRLRTVQAIQWAIVALGWAQS 265

Query: 236 ATF----VALNLRAHIKSAGERWFLIVAAIFLLQL 266
           + F    ++ N     +S G+    I+  + L  L
Sbjct: 266 SYFLNSQISSNNNTETQSNGKFSLSIIVVVALHTL 300

Possible role in vesicle-mediated transport. May be involved in proper membrane localization of Rab GTPases.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	281
30690667	282	Yip1 integral membrane domain-containing	1.0	0.996	0.825	1e-136
38564308	282	At5g27490 [Arabidopsis thaliana] gi|3860	1.0	0.996	0.818	1e-135
297808771	280	integral membrane Yip1 family protein [A	0.996	1.0	0.822	1e-134
224131520	284	predicted protein [Populus trichocarpa]	0.996	0.985	0.835	1e-133
449528399	286	PREDICTED: LOW QUALITY PROTEIN: protein	0.996	0.979	0.829	1e-132
449435675	287	PREDICTED: protein YIPF1 homolog [Cucumi	1.0	0.979	0.818	1e-132
255542616	279	Protein YIPF1, putative [Ricinus communi	0.992	1.0	0.839	1e-130
296088318	280	unnamed protein product [Vitis vinifera]	0.996	1.0	0.832	1e-127
224123210	283	predicted protein [Populus trichocarpa]	0.996	0.989	0.820	1e-126
356505865	279	PREDICTED: protein YIPF1 homolog [Glycin	0.992	1.0	0.814	1e-125

>gi|30690667|ref|NP_198101.2| Yip1 integral membrane domain-containing protein [Arabidopsis thaliana] gi|332006310|gb|AED93693.1| Yip1 integral membrane domain-containing protein [Arabidopsis thaliana]

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 232/281 (82%), Positives = 261/281 (92%)

Query: 1   MMSGGNYTSIDNQKLSGSVPAVPDPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVD 60
           MMSGG+YT+ID+QK+SGSVPAVPDPG VTVKF+DSNLQTFPPS T+GKISG + PP D D
Sbjct: 2   MMSGGSYTNIDHQKVSGSVPAVPDPGHVTVKFADSNLQTFPPSATQGKISGGTNPPRDAD 61

Query: 61  DTFSKPASGSSDEAQSSGWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEKTSD 120
           DTFS+P +G++DE QSSGW   FTV AYKPYFDVDTSDV+ER+K+SLFPFR TFTEKT++
Sbjct: 62  DTFSRPVNGTTDEPQSSGWLHRFTVGAYKPYFDVDTSDVVERLKESLFPFRGTFTEKTAN 121

Query: 121 NPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVTIVPL 180
           NPDLYGPFWIC+TLIFVAASIGTFVTYI+HK+  ++WNYDINLV WSAG+FYGYVTIVPL
Sbjct: 122 NPDLYGPFWICTTLIFVAASIGTFVTYIAHKLKKQEWNYDINLVTWSAGVFYGYVTIVPL 181

Query: 181 CLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVA 240
            LY++LKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAG+AGFMSATFVA
Sbjct: 182 ALYVVLKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGLAGFMSATFVA 241

Query: 241 LNLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTVTV 281
           LNL+AHI SAGERWFLIV +IFLLQLAL+V LK+YLFTVTV
Sbjct: 242 LNLKAHINSAGERWFLIVVSIFLLQLALSVVLKLYLFTVTV 282

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|38564308|gb|AAR23733.1| At5g27490 [Arabidopsis thaliana] gi|38604050|gb|AAR24768.1| At5g27490 [Arabidopsis thaliana]

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 230/281 (81%), Positives = 259/281 (92%)

Query: 1   MMSGGNYTSIDNQKLSGSVPAVPDPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVD 60
           MMSGG+YT+ID+QK+SGSVPAVPDPG VTVKF+DSNLQTFPPS T+GKISG + PP D D
Sbjct: 2   MMSGGSYTNIDHQKVSGSVPAVPDPGHVTVKFADSNLQTFPPSATQGKISGGTNPPRDAD 61

Query: 61  DTFSKPASGSSDEAQSSGWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEKTSD 120
           DTFS+P +G++DE QSSGW   FTV AYKPYFDVDTSDV+ER+K+SLFPFR TFTEKT++
Sbjct: 62  DTFSRPVNGTTDEPQSSGWLHRFTVGAYKPYFDVDTSDVVERLKESLFPFRGTFTEKTAN 121

Query: 121 NPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVTIVPL 180
           NPDLYGPFWIC+TLIFVAASIGTFVTYI+HK+  ++WNYDINLV WSAG+FYGYVTIVPL
Sbjct: 122 NPDLYGPFWICTTLIFVAASIGTFVTYIAHKLKKQEWNYDINLVTWSAGVFYGYVTIVPL 181

Query: 181 CLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVA 240
            LY++LKYF APSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAG+AGFMSATFVA
Sbjct: 182 ALYVVLKYFYAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGLAGFMSATFVA 241

Query: 241 LNLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTVTV 281
           LNL+AHI  AGERWFLIV +IFLLQLAL+V LK+YLFTVTV
Sbjct: 242 LNLKAHINPAGERWFLIVVSIFLLQLALSVVLKLYLFTVTV 282

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297808771|ref|XP_002872269.1| integral membrane Yip1 family protein [Arabidopsis lyrata subsp. lyrata] gi|297318106|gb|EFH48528.1| integral membrane Yip1 family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 231/281 (82%), Positives = 259/281 (92%), Gaps = 1/281 (0%)

Query: 1   MMSGGNYTSIDNQKLSGSVPAVPDPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVD 60
           MMSGG Y++ID+QK+SGSVPAVPDPG VTVKF+DSNLQTFPPS T+GKISG + PP DVD
Sbjct: 1   MMSGGGYSNIDHQKVSGSVPAVPDPGHVTVKFADSNLQTFPPSATQGKISGGTNPPRDVD 60

Query: 61  DTFSKPASGSSDEAQSSGWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEKTSD 120
           DTFS+P +G+ DE QS GW   FTV AYKPYFDVDTSDV+ER+K+SLFPFR TFTEKT++
Sbjct: 61  DTFSRPVNGT-DEPQSGGWLHRFTVGAYKPYFDVDTSDVVERLKESLFPFRGTFTEKTAN 119

Query: 121 NPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVTIVPL 180
           NPDLYGPFWIC+TLIFVAASIGTFVTYI+HK+  ++WNYDINLV WSAG+FYGYVTIVPL
Sbjct: 120 NPDLYGPFWICTTLIFVAASIGTFVTYIAHKLKKQEWNYDINLVTWSAGVFYGYVTIVPL 179

Query: 181 CLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVA 240
            LY++LKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAG+AGFMSATFVA
Sbjct: 180 ALYVVLKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGLAGFMSATFVA 239

Query: 241 LNLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTVTV 281
           LNL+AHI SAGERWFLIV +IFLLQLAL+V LK+YLFTVTV
Sbjct: 240 LNLKAHINSAGERWFLIVVSIFLLQLALSVVLKLYLFTVTV 280

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131520|ref|XP_002328560.1| predicted protein [Populus trichocarpa] gi|222838275|gb|EEE76640.1| predicted protein [Populus trichocarpa]

 Score =  478 bits (1231), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/285 (83%), Positives = 258/285 (90%), Gaps = 5/285 (1%)

Query: 1   MMSGG--NYTSIDNQ-KLSGSVPAVPDPGQVTVKFS-DSNLQTFPPSDTRGKISGVSGPP 56
           MMSGG   YT IDNQ ++SGSVPAVPDPG VTV+F+ DSNLQTFPPS ++GKISG S PP
Sbjct: 1   MMSGGVGKYTHIDNQPQVSGSVPAVPDPGHVTVQFTADSNLQTFPPSGSQGKISGGSRPP 60

Query: 57  SDVDDTFSKPASGSSDEAQSSGWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTE 116
            D DDTFSKP SGS DE Q  GWFR FT+AAYKPYFDVDT++VLERIKDSLFPFR TFTE
Sbjct: 61  RDADDTFSKPISGS-DEPQQGGWFRTFTIAAYKPYFDVDTTEVLERIKDSLFPFRGTFTE 119

Query: 117 KTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVT 176
           KT++NPDLYGPFWIC+TLIFVAASIGTFVTYI+HK+  K+WNYDINLV WSAG+FYGYV 
Sbjct: 120 KTANNPDLYGPFWICTTLIFVAASIGTFVTYIAHKLQKKEWNYDINLVTWSAGVFYGYVL 179

Query: 177 IVPLCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSA 236
           +VPL LY+ILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSA
Sbjct: 180 LVPLALYVILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSA 239

Query: 237 TFVALNLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTVTV 281
           TFVALNLRAHI SAGERWFLIVA IFLLQLAL+V LK+YLFTVTV
Sbjct: 240 TFVALNLRAHIMSAGERWFLIVAGIFLLQLALSVVLKLYLFTVTV 284

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449528399|ref|XP_004171192.1| PREDICTED: LOW QUALITY PROTEIN: protein YIPF1 homolog [Cucumis sativus]

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 238/287 (82%), Positives = 255/287 (88%), Gaps = 7/287 (2%)

Query: 1   MMSGGNYTSIDNQKLSGSVPAVPDPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVD 60
           MMSGGNYT+IDNQ +SGSVPAVPD GQ+TVKF+DSNLQTFPPS T+GKISG S PP D D
Sbjct: 1   MMSGGNYTTIDNQNVSGSVPAVPDQGQMTVKFTDSNLQTFPPSGTQGKISGGSQPPRDAD 60

Query: 61  DTFSKPASGSSDEAQSSG------WFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTF 114
           DTFSKP S SSDE Q  G      W R F V++YK YFDVDTSDVLERIKDSLFPFR TF
Sbjct: 61  DTFSKPIS-SSDEPQQGGGGGGGGWLRTFAVSSYKQYFDVDTSDVLERIKDSLFPFRGTF 119

Query: 115 TEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGY 174
            E+T+D PDLYGPFWIC+TLIFVAASIGTFVTY++HK++NKDWNYDINLV WSAGLFYGY
Sbjct: 120 NERTADTPDLYGPFWICTTLIFVAASIGTFVTYVAHKLHNKDWNYDINLVTWSAGLFYGY 179

Query: 175 VTIVPLCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFM 234
           VTIVPL LY+ILKYFS PSGLVQL CLYGYSLFVFIPALCLSVVPLE FRWVIAGVAGFM
Sbjct: 180 VTIVPLGLYVILKYFSVPSGLVQLLCLYGYSLFVFIPALCLSVVPLESFRWVIAGVAGFM 239

Query: 235 SATFVALNLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTVTV 281
           SATFVALNLRAHIKSAGERWFLIVA+IFLLQLALAV LK+YLFTV V
Sbjct: 240 SATFVALNLRAHIKSAGERWFLIVASIFLLQLALAVILKLYLFTVAV 286

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435675|ref|XP_004135620.1| PREDICTED: protein YIPF1 homolog [Cucumis sativus]

 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 235/287 (81%), Positives = 253/287 (88%), Gaps = 6/287 (2%)

Query: 1   MMSGGNYTSIDNQKLSGSVPAVPDPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVD 60
           MMSGGNYT+IDNQ +SGSVPAVPD GQ+TVKF+DSNLQTFPPS T+GKISG S PP D D
Sbjct: 1   MMSGGNYTTIDNQNVSGSVPAVPDQGQMTVKFTDSNLQTFPPSGTQGKISGGSQPPRDAD 60

Query: 61  DTFSKPASGSSDEAQSSG------WFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTF 114
           DTFSKP S S +  Q  G      W R F V++YK YFDVDTSDVLERIKDSLFPFR TF
Sbjct: 61  DTFSKPISSSDESPQQGGGGGGGGWLRTFAVSSYKQYFDVDTSDVLERIKDSLFPFRGTF 120

Query: 115 TEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGY 174
            E+T+D PDLYGPFWIC+TLIFVAASIGTFVTY++HK++NKDWNYDINLV WSAGLFYGY
Sbjct: 121 NERTADTPDLYGPFWICTTLIFVAASIGTFVTYVAHKLHNKDWNYDINLVTWSAGLFYGY 180

Query: 175 VTIVPLCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFM 234
           VTIVPL LY+ILKYFS PSGLVQL CLYGYSLFVFIPALCLSVVPLE FRWVIAGVAGFM
Sbjct: 181 VTIVPLGLYVILKYFSVPSGLVQLLCLYGYSLFVFIPALCLSVVPLESFRWVIAGVAGFM 240

Query: 235 SATFVALNLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTVTV 281
           SATFVALNLRAHIKSAGERWFLIVA+IFLLQLALAV LK+YLFTV V
Sbjct: 241 SATFVALNLRAHIKSAGERWFLIVASIFLLQLALAVILKLYLFTVAV 287

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542616|ref|XP_002512371.1| Protein YIPF1, putative [Ricinus communis] gi|223548332|gb|EEF49823.1| Protein YIPF1, putative [Ricinus communis]

 Score =  470 bits (1209), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 235/280 (83%), Positives = 254/280 (90%), Gaps = 1/280 (0%)

Query: 2   MSGGNYTSIDNQKLSGSVPAVPDPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVDD 61
           M  GNYTS+DNQK+SGSVPAVPDPG V+VKFSDS LQTFPPS  +GKISG S PP D DD
Sbjct: 1   MMSGNYTSLDNQKVSGSVPAVPDPGHVSVKFSDSTLQTFPPSTAQGKISGGSHPPRDADD 60

Query: 62  TFSKPASGSSDEAQSSGWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEKTSDN 121
           TFSKP SGS DE Q  GWFR FT+AAYKPYFD+DT+DVLERIKDSLFPFR TFTEKT+ N
Sbjct: 61  TFSKPVSGS-DEPQQGGWFRTFTIAAYKPYFDIDTTDVLERIKDSLFPFRGTFTEKTAGN 119

Query: 122 PDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVTIVPLC 181
           PDLYGPFWIC+TLIFVAA+IGTFVTY++HK+ NK W YDINLV WSAG+FYGYVTI+PL 
Sbjct: 120 PDLYGPFWICTTLIFVAAAIGTFVTYVAHKLQNKKWEYDINLVTWSAGVFYGYVTIIPLG 179

Query: 182 LYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVAL 241
           LY+ILKYFSAPSGL QLFCLYGYSLFVFIPALCLS+VPLEIFRWVIAGVAGFMSATFVAL
Sbjct: 180 LYVILKYFSAPSGLAQLFCLYGYSLFVFIPALCLSIVPLEIFRWVIAGVAGFMSATFVAL 239

Query: 242 NLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTVTV 281
           NLR HIKSAGERWFLIVA+IFLLQLALAV LK+YLFTVTV
Sbjct: 240 NLRTHIKSAGERWFLIVASIFLLQLALAVVLKLYLFTVTV 279

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088318|emb|CBI36763.3| unnamed protein product [Vitis vinifera]

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 234/281 (83%), Positives = 257/281 (91%), Gaps = 1/281 (0%)

Query: 1   MMSGGNYTSIDNQKLSGSVPAVPDPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVD 60
           MMSGGNYT+IDNQK+SGSVPAV DPGQVTVKF+DSNL+TFPPS+ +GKISG S PP D D
Sbjct: 1   MMSGGNYTTIDNQKISGSVPAVSDPGQVTVKFADSNLETFPPSEAQGKISGASRPPRDAD 60

Query: 61  DTFSKPASGSSDEAQSSGWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEKTSD 120
           +TFSKP  GS DE+  SGW R+FTVAAYKPYFDVDTSDVLERIKDSLFPF  +F+EK + 
Sbjct: 61  ETFSKPVPGS-DESPPSGWLRSFTVAAYKPYFDVDTSDVLERIKDSLFPFNGSFSEKVAS 119

Query: 121 NPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVTIVPL 180
           NPDLYGPFWIC+TLIFVAASIGTFVTY++HK+  K+W+YDINLV WSAGLFYGYVTI+PL
Sbjct: 120 NPDLYGPFWICTTLIFVAASIGTFVTYVAHKIQKKEWDYDINLVTWSAGLFYGYVTIIPL 179

Query: 181 CLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVA 240
            LYIILKYFSAPSGL QL CLYGYSLF+FIPALCLSVVPLE+FRWV+AGVAGF+SATFVA
Sbjct: 180 GLYIILKYFSAPSGLAQLLCLYGYSLFIFIPALCLSVVPLELFRWVVAGVAGFLSATFVA 239

Query: 241 LNLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTVTV 281
           LNLRAHIKSAGERWFLIVAAIFLLQLALA  LKIYLFTVTV
Sbjct: 240 LNLRAHIKSAGERWFLIVAAIFLLQLALAAVLKIYLFTVTV 280

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123210|ref|XP_002319021.1| predicted protein [Populus trichocarpa] gi|222857397|gb|EEE94944.1| predicted protein [Populus trichocarpa]

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/284 (82%), Positives = 255/284 (89%), Gaps = 4/284 (1%)

Query: 1   MMSGG--NYTSIDNQKLSGSVPAVPDPGQVTVKFS-DSNLQTFPPSDTRGKISGVSGPPS 57
           MMSGG   YT IDNQK+SGSVP+VPDPG V V+F+ DSNLQTFPPS+++GKISG + PP 
Sbjct: 1   MMSGGVGKYTHIDNQKVSGSVPSVPDPGHVAVQFTADSNLQTFPPSESQGKISGGTRPPR 60

Query: 58  DVDDTFSKPASGSSDEAQSSGWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEK 117
           D DDTFSKP SGS +E+Q  GWFR FTVAAYKPYFDVDT+DVLERIK SLFPFR TFTEK
Sbjct: 61  DADDTFSKPVSGS-EESQQGGWFRTFTVAAYKPYFDVDTTDVLERIKYSLFPFRGTFTEK 119

Query: 118 TSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVTI 177
           T  NPDLYGPFWIC+TLIFVAASIGTFVTYI+HK+  K+WNYDINLV WSAG+FYGYV +
Sbjct: 120 TVSNPDLYGPFWICTTLIFVAASIGTFVTYIAHKLQKKEWNYDINLVTWSAGVFYGYVLL 179

Query: 178 VPLCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSAT 237
           VPL LY+ILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSV+P+EIFRWVIAGVAGFMSAT
Sbjct: 180 VPLVLYVILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVIPVEIFRWVIAGVAGFMSAT 239

Query: 238 FVALNLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTVTV 281
           FVALNLRAHI SAGERWF IVA IFLLQLAL+V LK+YLFTVTV
Sbjct: 240 FVALNLRAHIMSAGERWFFIVAGIFLLQLALSVVLKLYLFTVTV 283

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505865|ref|XP_003521710.1| PREDICTED: protein YIPF1 homolog [Glycine max]

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/280 (81%), Positives = 250/280 (89%), Gaps = 1/280 (0%)

Query: 2   MSGGNYTSIDNQKLSGSVPAVPDPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVDD 61
           M  G YTSID Q+L GSVPAVPD    TV F+DSNLQTFPPS  +GKI+  SGPP D DD
Sbjct: 1   MMSGKYTSIDAQQLQGSVPAVPDSRPATVNFADSNLQTFPPSGAQGKITAASGPPRDADD 60

Query: 62  TFSKPASGSSDEAQSSGWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEKTSDN 121
           +FSKP SGS DE Q  GWF+ FT+AAYKPYFDVDTSDVLERI DSLFPFR +F EKT+ N
Sbjct: 61  SFSKPVSGS-DEPQQGGWFQTFTIAAYKPYFDVDTSDVLERIIDSLFPFRGSFNEKTATN 119

Query: 122 PDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVTIVPLC 181
           PDLYGPFWIC+TLIFVAASIGTFVTYI+HK+ +K+W+YDINLV WSAGLFYGYVTIVPLC
Sbjct: 120 PDLYGPFWICTTLIFVAASIGTFVTYIAHKLKSKEWDYDINLVTWSAGLFYGYVTIVPLC 179

Query: 182 LYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVAL 241
           LY+ILKYFSAP+GLVQLFCLYGYSLFVFIPALC+SVVPL+IFRWV+AGVAGFMSATFVAL
Sbjct: 180 LYVILKYFSAPAGLVQLFCLYGYSLFVFIPALCMSVVPLDIFRWVVAGVAGFMSATFVAL 239

Query: 242 NLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTVTV 281
           NLRAHIKSAGERWFLIVA IFLLQLALAV LK+YLFTV+V
Sbjct: 240 NLRAHIKSAGERWFLIVAGIFLLQLALAVVLKLYLFTVSV 279

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	281
TAIR|locus:2146435	282	AT5G27490 "AT5G27490" [Arabido	1.0	0.996	0.825	8.4e-129
TAIR|locus:2096324	281	AT3G05280 "AT3G05280" [Arabido	1.0	1.0	0.797	9.2e-123
TAIR|locus:504955927	276	AT2G39805 "AT2G39805" [Arabido	0.932	0.949	0.375	7.1e-45
DICTYBASE|DDB_G0281587	347	yipf1 "Yip1 domain-containing	0.772	0.625	0.337	8.3e-35
ASPGD|ASPL0000010437	301	AN4017 [Emericella nidulans (t	0.672	0.627	0.373	1e-27
UNIPROTKB|I3L692	306	YIPF1 "Uncharacterized protein	0.882	0.810	0.312	1.3e-27
UNIPROTKB|F1PC46	305	YIPF1 "Uncharacterized protein	0.893	0.822	0.318	1.7e-27
FB|FBgn0030435	360	CG4645 [Drosophila melanogaste	0.818	0.638	0.316	2.2e-27
UNIPROTKB|B7Z6F5	331	YIPF1 "Protein YIPF1" [Homo sa	0.882	0.749	0.315	2.2e-27
UNIPROTKB|Q9Y548	306	YIPF1 "Protein YIPF1" [Homo sa	0.882	0.810	0.315	2.2e-27

TAIR|locus:2146435 AT5G27490 "AT5G27490" [Arabidopsis thaliana (taxid:3702)]

 Score = 1264 (450.0 bits), Expect = 8.4e-129, P = 8.4e-129
 Identities = 232/281 (82%), Positives = 261/281 (92%)

Query:     1 MMSGGNYTSIDNQKLSGSVPAVPDPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVD 60
             MMSGG+YT+ID+QK+SGSVPAVPDPG VTVKF+DSNLQTFPPS T+GKISG + PP D D
Sbjct:     2 MMSGGSYTNIDHQKVSGSVPAVPDPGHVTVKFADSNLQTFPPSATQGKISGGTNPPRDAD 61

Query:    61 DTFSKPASGSSDEAQSSGWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEKTSD 120
             DTFS+P +G++DE QSSGW   FTV AYKPYFDVDTSDV+ER+K+SLFPFR TFTEKT++
Sbjct:    62 DTFSRPVNGTTDEPQSSGWLHRFTVGAYKPYFDVDTSDVVERLKESLFPFRGTFTEKTAN 121

Query:   121 NPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVTIVPL 180
             NPDLYGPFWIC+TLIFVAASIGTFVTYI+HK+  ++WNYDINLV WSAG+FYGYVTIVPL
Sbjct:   122 NPDLYGPFWICTTLIFVAASIGTFVTYIAHKLKKQEWNYDINLVTWSAGVFYGYVTIVPL 181

Query:   181 CLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVA 240
              LY++LKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAG+AGFMSATFVA
Sbjct:   182 ALYVVLKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGLAGFMSATFVA 241

Query:   241 LNLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTVTV 281
             LNL+AHI SAGERWFLIV +IFLLQLAL+V LK+YLFTVTV
Sbjct:   242 LNLKAHINSAGERWFLIVVSIFLLQLALSVVLKLYLFTVTV 282

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=RCA

TAIR|locus:2096324 AT3G05280 "AT3G05280" [Arabidopsis thaliana (taxid:3702)]

 Score = 1207 (429.9 bits), Expect = 9.2e-123, P = 9.2e-123
 Identities = 224/281 (79%), Positives = 252/281 (89%)

Query:     1 MMSGGNYTSIDNQKLSGSVPAVPDPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVD 60
             MMSGGNYT+ID+QK+SGSVP+VPDPG  TVKF++SNLQTFPPS T+GKISG S PP D D
Sbjct:     1 MMSGGNYTTIDSQKVSGSVPSVPDPGHTTVKFAESNLQTFPPSATQGKISGGSNPPRDAD 60

Query:    61 DTFSKPASGSSDEAQSSGWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEKTSD 120
             D+FS   +GS+DE QS GW   FTV AYKP+FDVDTSDV+ER+K+SLFPFR TFTEKT+D
Sbjct:    61 DSFSGHGNGSTDEPQSGGWLHKFTVGAYKPFFDVDTSDVVERLKESLFPFRGTFTEKTAD 120

Query:   121 NPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVTIVPL 180
              PDLYGPFWIC+TLIFVAASIGTFVTYI+HK   ++WNYDINLV WSAG+FYGYVTIVPL
Sbjct:   121 KPDLYGPFWICTTLIFVAASIGTFVTYIAHKWKKQEWNYDINLVTWSAGVFYGYVTIVPL 180

Query:   181 CLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVA 240
              LY++LKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVP+EIFRWVIAGVAGFMSATFVA
Sbjct:   181 ALYVVLKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPVEIFRWVIAGVAGFMSATFVA 240

Query:   241 LNLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLFTVTV 281
             LNL+AHI SAGER  LI+A+IFLLQLALAV LK+Y+F V V
Sbjct:   241 LNLKAHINSAGERSILIIASIFLLQLALAVVLKLYIFNVKV 281

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016192 "vesicle-mediated transport" evidence=RCA

TAIR|locus:504955927 AT2G39805 "AT2G39805" [Arabidopsis thaliana (taxid:3702)]

 Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
 Identities = 106/282 (37%), Positives = 160/282 (56%)

Query:     6 NYTSIDNQKLSGSVPAV--PDPGQVTVKFSDSN------LQTFPPSDTRGKISGVSGPPS 57
             ++ ++ +  L GSVPAV   D     V  +  N      +Q FPP+   G  +   G  +
Sbjct:     4 SFANLQSSHLLGSVPAVISDDKRSTNVPIASVNEGPSASMQIFPPN--LG--NNTKGYQT 59

Query:    58 DVDDTFSKPASGSSDEAQSSGWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEK 117
                 T   PA     +  S+ W   F V +Y  YFDVDT  VL R+  SL+P    F  K
Sbjct:    60 LESPTVEGPA-----QQPSNNWKGFFNVYSYTQYFDVDTDVVLNRLMSSLYPTSGDFFNK 114

Query:   118 TSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKV--NNKDWNYDINLVPWSAGLFYGYV 175
                NPDLYG  WIC+TL+FV AS+G   TY+  K   +N  W +D+N +  +A + YGY 
Sbjct:   115 IDANPDLYGLVWICTTLVFVLASLGNCATYLVKKRTDSNAPWIFDVNYMNLAASIIYGYA 174

Query:   176 TIVPLCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMS 235
              IVPL  Y  L+Y  + + L++ +CL+GYSLF+F+P     ++P+E  RWVI  +AG  S
Sbjct:   175 IIVPLGFYFALRYMGSKADLLRFWCLWGYSLFIFVPTSLPLLIPVEFLRWVIILLAGSAS 234

Query:   236 ATFVALNLRAHIKSAGERWFLIVAAIFLLQLALAVALKIYLF 277
             + FVALNLR+++++  +   +++AA F LQ+ L++ +K++ F
Sbjct:   235 SCFVALNLRSYLETNNDIT-VVMAAAFGLQMVLSIFIKVWFF 275

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

DICTYBASE|DDB_G0281587 yipf1 "Yip1 domain-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 74/219 (33%), Positives = 125/219 (57%)

Query:    60 DDTFSKPASGSSDEAQSSGWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEKTS 119
             ++ FS     +++E  +   +  + V  Y+  F+VDT +V  R+  S+ P + +F     
Sbjct:   103 NNKFSDNVPLNTNEDGTEKKYSFYEVPYYRFLFNVDTKEVGLRLIRSMLPIKFSFFNLIR 162

Query:   120 DNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVTIVP 179
             +NPDLYGPFW+ ++L+F+ A       Y  H  ++K W  DI  + +SA   YGY  ++P
Sbjct:   163 ENPDLYGPFWVLTSLVFIVAVTSNLNEYF-HSSDHKSWEVDIQKIVYSAITIYGYSFVIP 221

Query:   180 LCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFV 239
             L L+ I K+ +    L+ + C+YGY+LF+F+PA  L V+PL++ +W+I  +A  +S  F+
Sbjct:   222 LILWGIFKWMNLGLRLLDMLCIYGYTLFIFVPASILCVIPLQLVQWIIVAIASIVSGLFL 281

Query:   240 ALNLRAHIKSA-GERWFLIVAAIFLLQLALAVALKIYLF 277
               N+   +K    +R  +I A I  L + LA+ LK+Y F
Sbjct:   282 VTNIFTPLKEDFTKRGLIICAVIGALHIGLALVLKLYFF 320

GO:0016020 "membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

ASPGD|ASPL0000010437 AN4017 [Emericella nidulans (taxid:162425)]

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 75/201 (37%), Positives = 113/201 (56%)

Query:    83 FTVAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEKTSDNPDLYGPFWICSTLIFVAASIG 142
             +++  Y+ YFDVDT++VL R   S++P R  F +    N DLYGPFWI +T+I +    G
Sbjct:    76 WSIHYYEQYFDVDTNEVLRRCVASVYP-RSNFLDVLEGNADLYGPFWIATTVIVILFLTG 134

Query:   143 TFVTYISHKVNNKD-WNYDINLVPWSAGLFYGYVTIVPLCLYIILKYF-SAPSGLVQLFC 200
             T   ++S+  N+K+ + YD  L+  +AGL YGY   +P+ L+  LK+F S+ + LV+ + 
Sbjct:   135 TISQWLSN--NDKEHFKYDFTLLSGAAGLVYGYTFALPIALWGALKWFGSSTADLVECWA 192

Query:   201 LYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGE----RWFL 256
             LYGYS  V+I    +S  PL    W + GV GF    F  L     + SA +    R  L
Sbjct:   193 LYGYSNLVWIAVALVSWSPLTALNWALVGV-GFAWTVFFLLRNLYPVLSATDAKASRALL 251

Query:   257 IVAAIFLLQLALAVALKIYLF 277
             I+  + +L    A+A+KI  F
Sbjct:   252 IL--VIVLHAGFAIAIKILFF 270

GO:0008150 "biological_process" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|I3L692 YIPF1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 83/266 (31%), Positives = 127/266 (47%)

Query:    24 DPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVDDTFSKPASGSSDEAQSSGWFRAF 83
             +P   T+   D+  +T  P    G   G SG   D D+      S  ++          F
Sbjct:    22 NPDATTISIEDTG-ET--PKHQSGPSRG-SGREED-DELLGNDDSDKTELLAGQKKSSPF 76

Query:    84 -TVAAYKPYFDVDTSDVLERIKDSLFPFRD-TFTEK-TSDNPDLYGPFWICSTLIFVAAS 140
              T   Y+ +FDVDT  V +RIK SL P     F       NPDLYGPFWIC+TL+F  A 
Sbjct:    77 WTFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNPDLYGPFWICATLVFAIAI 136

Query:   141 IGTFVTYISHKVNNKDWNY--DINLVPWSAGLFYGYVTIVPLCLYIIL-----KYFSAPS 193
              G    ++ H +  K ++Y  +   V  +A + Y Y  +VPL L+  L     K  +  S
Sbjct:   137 SGNLSNFLIH-LGEKTYHYVPEFRKVSIAATIIYAYAWLVPLALWGFLVWRNSKVMNIVS 195

Query:   194 -GLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGE 252
                +++ C+YGYSLF++IP   L ++P +  RW++  +A  +S + +A+     ++    
Sbjct:   196 YSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVTIALGISGSVLAMTFWPAVREDNR 255

Query:   253 RWFLI-VAAIFLLQLALAVALKIYLF 277
             R  L  +  I LL + L+V    Y F
Sbjct:   256 RIALATIVTIVLLHMLLSVGCLAYFF 281

GO:0030133 "transport vesicle" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1PC46 YIPF1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
 Identities = 86/270 (31%), Positives = 126/270 (46%)

Query:    20 PAVPDPGQVTVKFSD-SNLQTFPPSDTRGKISGVSGPPSDVDDTFSKPASGSSDEAQSSG 78
             PA  +PG  T+     S   T  P   RG   G        +D   K    +  +  S  
Sbjct:    19 PAA-NPGATTIHIEGPSESPTHQPGLPRGS-GGEEDDELLGNDDSDKTELLAGQKKSSPF 76

Query:    79 WFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRD-TFTEK-TSDNPDLYGPFWICSTLIF 136
             W    T   Y+ +FDVDT  V +RIK SL P     F       NPDLYGPFWIC+TL+F
Sbjct:    77 W----TFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNPDLYGPFWICATLVF 132

Query:   137 VAASIGTFVTYISHKVNNKDWNY--DINLVPWSAGLFYGYVTIVPLCLYIIL-----KYF 189
               A  G    ++ H +  K ++Y  +   V  +A + Y Y  +VPL L+  L     K  
Sbjct:   133 AIAISGNLSNFLIH-LGEKTYHYVPEFRKVSIAATIIYAYAWLVPLALWGFLMWRNSKVM 191

Query:   190 SAPS-GLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIK 248
             +  S   +++ C+YGYSLF++IP   L V+P +  RW++  +A  +S + +A+     ++
Sbjct:   192 NIVSYSFLEIVCVYGYSLFIYIPTAVLWVIPQKAVRWILVMIALGISGSVLAMTFWPAVR 251

Query:   249 SAGERWFLI-VAAIFLLQLALAVALKIYLF 277
                 R  L  +  I LL   L+V    Y F
Sbjct:   252 EDNRRIALATIVTIVLLHTLLSVGCLAYFF 281

GO:0030133 "transport vesicle" evidence=IEA

GO:0016020 "membrane" evidence=IEA

FB|FBgn0030435 CG4645 [Drosophila melanogaster (taxid:7227)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 81/256 (31%), Positives = 122/256 (47%)

Query:    44 DTRGKISGVSGPPSDVDDTFSKPASGSSDEAQSSGWFRA----FTVAAYKPYFDVDTSDV 99
             D      G SG  S      S+P + S D +   G   A    FT+  Y+ +F+VDT  V
Sbjct:    68 DMTSSAQGFSGAASSGG---SQPQNSSLDGSAGGGGGGAKLSLFTIEYYQQFFNVDTYMV 124

Query:   100 LERIKDSLFPFRDT---FTEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKD 156
             LERI +S+ P R +         +NPDLYGPFWI  TLIF  A  G   +Y+    +   
Sbjct:   125 LERIANSMIPKRASGNYLRMNIGENPDLYGPFWITVTLIFSIAISGNIASYLQQATDAYK 184

Query:   157 WNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSAP---------------SGLVQLFCL 201
             W+Y+ +LV ++A   + Y  I+P  L+ + KY   P                 L+ L C+
Sbjct:   185 WHYNFHLVSYAATSIFLYANILPAVLWALFKYSLKPVDSADAVETDSASYMPSLLSLMCI 244

Query:   202 YGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGERWFLIVAAI 261
             YGYSL ++IP   L V+ + + +W++   A  +S T +   L   ++++    FLIV  I
Sbjct:   245 YGYSLAIYIPVSILWVINISLLQWLLVITAALLSGTVLIAVLTPALRNSQFSLFLIVG-I 303

Query:   262 FLLQLALAVALKIYLF 277
                 + LA    +Y F
Sbjct:   304 LSAHVVLAAGFLLYFF 319

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|B7Z6F5 YIPF1 "Protein YIPF1" [Homo sapiens (taxid:9606)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 84/266 (31%), Positives = 126/266 (47%)

Query:    24 DPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVDDTFSKPASGSSDEAQSSGWFRAF 83
             +P   TV   D   +T  P    G   G SG   D D+      S  ++          F
Sbjct:    47 NPDATTVNIEDPG-ET--PKHQPGSPRG-SGREED-DELLGNDDSDKTELLAGQKKSSPF 101

Query:    84 -TVAAYKPYFDVDTSDVLERIKDSLFPFRD-TFTEK-TSDNPDLYGPFWICSTLIFVAAS 140
              T   Y+ +FDVDT  V +RIK SL P     F       NPDLYGPFWIC+TL+F  A 
Sbjct:   102 WTFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNPDLYGPFWICATLVFAIAI 161

Query:   141 IGTFVTYISHKVNNKDWNY--DINLVPWSAGLFYGYVTIVPLCLYIIL-----KYFSAPS 193
              G    ++ H +  K ++Y  +   V  +A + Y Y  +VPL L+  L     K  +  S
Sbjct:   162 SGNLSNFLIH-LGEKTYHYVPEFRKVSIAATIIYAYAWLVPLALWGFLMWRNSKVMNIVS 220

Query:   194 -GLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGE 252
                +++ C+YGYSLF++IP   L ++P +  RW++  +A  +S + +A+     ++    
Sbjct:   221 YSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGISGSLLAMTFWPAVREDNR 280

Query:   253 RWFLI-VAAIFLLQLALAVALKIYLF 277
             R  L  +  I LL + L+V    Y F
Sbjct:   281 RVALATIVTIVLLHMLLSVGCLAYFF 306

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q9Y548 YIPF1 "Protein YIPF1" [Homo sapiens (taxid:9606)]

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 84/266 (31%), Positives = 126/266 (47%)

Query:    24 DPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVDDTFSKPASGSSDEAQSSGWFRAF 83
             +P   TV   D   +T  P    G   G SG   D D+      S  ++          F
Sbjct:    22 NPDATTVNIEDPG-ET--PKHQPGSPRG-SGREED-DELLGNDDSDKTELLAGQKKSSPF 76

Query:    84 -TVAAYKPYFDVDTSDVLERIKDSLFPFRD-TFTEK-TSDNPDLYGPFWICSTLIFVAAS 140
              T   Y+ +FDVDT  V +RIK SL P     F       NPDLYGPFWIC+TL+F  A 
Sbjct:    77 WTFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNPDLYGPFWICATLVFAIAI 136

Query:   141 IGTFVTYISHKVNNKDWNY--DINLVPWSAGLFYGYVTIVPLCLYIIL-----KYFSAPS 193
              G    ++ H +  K ++Y  +   V  +A + Y Y  +VPL L+  L     K  +  S
Sbjct:   137 SGNLSNFLIH-LGEKTYHYVPEFRKVSIAATIIYAYAWLVPLALWGFLMWRNSKVMNIVS 195

Query:   194 -GLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFVALNLRAHIKSAGE 252
                +++ C+YGYSLF++IP   L ++P +  RW++  +A  +S + +A+     ++    
Sbjct:   196 YSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGISGSLLAMTFWPAVREDNR 255

Query:   253 RWFLI-VAAIFLLQLALAVALKIYLF 277
             R  L  +  I LL + L+V    Y F
Sbjct:   256 RVALATIVTIVLLHMLLSVGCLAYFF 281

GO:0016021 "integral to membrane" evidence=IEA

GO:0030133 "transport vesicle" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	AT5G27490	integral membrane Yip1 family protein; integral membrane Yip1 family protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 14 growth stages; CONTAINS InterPro DOMAIN/s- Yip1 domain (InterPro-IPR006977); BEST Arabidopsis thaliana protein match is- integral membrane Yip1 family protein (TAIR-AT3G05280.1); Has 392 Blast hits to 391 proteins in 123 species- Archae - 0; Bacteria - 0; Metazoa - 206; Fungi - 68; Plants - 46; Viruses - 0; Other Eukaryotes - 72 (sou [...] (282 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	AT4G30260	integral membrane Yip1 family protein; integral membrane Yip1 family protein; FUNCTIONS IN- mol [...] (280 aa)					•				0.792

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	281
pfam04893	171	pfam04893, Yip1, Yip1 domain	4e-06

>gnl|CDD|218316 pfam04893, Yip1, Yip1 domain

 Score = 45.9 bits (109), Expect = 4e-06
 Identities = 30/185 (16%), Positives = 61/185 (32%), Gaps = 23/185 (12%)

Query: 92  FDVDTSDVLERIKDSLFPFRDTFTEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHK 151
              D S+   RI++   P            P L        TL+            +   
Sbjct: 1   VLTDPSEAFRRIREEPPPR----------APWLPLLLLALLTLLLGLLLALLLGWLLG-- 48

Query: 152 VNNKDWNYDINLVPWSAGLFYGYVT------IVPLCLYIILKYFSAPSGLVQLFCLYGYS 205
             + +    +        +  GY+       ++ L L++I K F       Q   L GY+
Sbjct: 49  --SGETIQGLTGGSALGSIIGGYLGLLLGLFLLALLLHLIAKLFGGDGSFKQTLSLVGYA 106

Query: 206 LFVFIPALCLSVVPLEIF---RWVIAGVAGFMSATFVALNLRAHIKSAGERWFLIVAAIF 262
           L   I    ++++   +      ++  +A   S   + L L+A    + ++  L+   + 
Sbjct: 107 LLPLILGGLIALLLSLLLGALLLLVGLLALIWSLYLLYLGLKAAHGLSKKKALLVALLLL 166

Query: 263 LLQLA 267
           LL + 
Sbjct: 167 LLLIV 171

The Yip1 integral membrane domain contains four transmembrane alpha helices. The domain is characterized by the motifs DLYGP and GY. The Yip1 protein is a golgi protein involved in vesicular transport that interacts with GTPases. Length = 171

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	281
KOG3114	290	consensus Uncharacterized conserved protein [Funct	100.0
KOG2946	234	consensus Uncharacterized conserved protein [Funct	99.51
KOG3103	249	consensus Rab GTPase interacting factor, Golgi mem	99.15
PF04893	172	Yip1: Yip1 domain; InterPro: IPR006977 This entry	99.06
COG5080	227	YIP1 Rab GTPase interacting factor, Golgi membrane	98.95
PF03878	240	YIF1: YIF1; InterPro: IPR005578 This family includ	98.92
KOG3094	284	consensus Predicted membrane protein [Function unk	98.5
COG5197	284	Predicted membrane protein [Function unknown]	98.32
PF06930	170	DUF1282: Protein of unknown function (DUF1282); In	94.94
PF10348	105	DUF2427: Domain of unknown function (DUF2427); Int	84.38

>KOG3114 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=4.8e-60  Score=436.46  Aligned_cols=267  Identities=39%  Similarity=0.676  Sum_probs=237.7

Q ss_pred             CCcccCCCCCccccCCCCCCCCccccccCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-ccccCCCceeeee
Q 023517            6 NYTSIDNQKLSGSVPAVPDPGQVTVKFSDSNLQTFPPSDTRGKISGVSGPPSDVDDTFSKPASGSS-DEAQSSGWFRAFT   84 (281)
Q Consensus         6 ~y~~~~~~~~~~sv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~g~~~~~s   84 (281)
                      +++-++.++.+|++|+.++..++....++.     +|+...++..|+.+.+.++++.|.++..... +++|.+.+.++|+
T Consensus         2 ~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~~sqq~~~~~~~~t   76 (290)
T KOG3114|consen    2 NLTFLDFDDVSGGFEDNPDAGGPNVIDTEY-----DPSARSGSTVGGGSDEYNEQGGFDDSKATWLLQSQQVSDQLSFFT   76 (290)
T ss_pred             CcchhhccccccccccCCCCCCCcccCCCC-----CCccCcCCcCCCCcccccccccccCCCcccccccccccCCccccc
Confidence            478899999999999999888887766665     6777777777777778788888888876543 4555666678999


Q ss_pred             ecccccCcCCChHHHHHHHhhcccCCCCCcccccCCCCCcchhHHHHHHHHHHHHHHhhHHHHhhhccCCc-ceeEEecc
Q 023517           85 VAAYKPYFDVDTSDVLERIKDSLFPFRDTFTEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNK-DWNYDINL  163 (281)
Q Consensus        85 i~yY~~yFdVdT~~V~~Rl~~sl~P~k~~f~e~~~~~pDLYGPfWI~~TLIf~lai~gnl~~yl~~~~~~~-~~~ydf~~  163 (281)
                      ++||||||||||.||++||+.||+| ++.+.+.++.|||||||||||+||||+++++||+.+||++...+. +|.|||++
T Consensus        77 i~yyq~fFdVDt~qV~~Rl~~SliP-~~~~~~~~~~~PDLYGPfWI~~TlVf~l~~~g~~~~~i~~~t~~g~~~g~~f~~  155 (290)
T KOG3114|consen   77 IEYYQPFFDVDTAQVRKRLKESLIP-RNYVRDQIQDNPDLYGPFWITATLVFALAISGNLATFIRNGTLKGTAYGYDFGL  155 (290)
T ss_pred             HHhhccccCCCHHHHHHHHHHhcCC-ccccccccCCCccccccHHHHHHHHHHHHHcccHHHHHHhccccceeeecccch
Confidence            9999999999999999999999999 555678899999999999999999999999999999999987755 89999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhcCC-----CchhhhHhhhccccchhHHHHhhhhchhHHHHHHHHHHHHHHHHHH
Q 023517          164 VPWSAGLFYGYVTIVPLCLYIILKYFSAP-----SGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATF  238 (281)
Q Consensus       164 v~~A~~liygY~~lvPlil~~~lk~~~~~-----~sl~~liclYGYSl~i~IPvsiL~vip~~~lrWviv~~~~~~S~~f  238 (281)
                      +++|+++||+|++++|+++|.+++|++..     .++.|++|+||||+++|||+.+++++|+.++||++++.++..|+.|
T Consensus       156 v~saa~~iy~Y~~ivp~~l~~iL~~~~~~~~~~~~~l~~~~~iygysl~i~ip~~vl~iv~~~~~~wvl~~~~~~~S~~~  235 (290)
T KOG3114|consen  156 VTSAATLIYGYLTIVPLALWGILSWNGYSLLLHCYVLLELVCIYGYSLFIFIPLLVLWIVPSSMVQWVLVGTALGLSGTF  235 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccccccccceehhhHHHHHhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhHHH
Confidence            99999999999999999999999998832     5789999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhhhcCc--chhHHHHHHHHHHHHHHHHHHHHhcc
Q 023517          239 VALNLRAHIKSAGE--RWFLIVAAIFLLQLALAVALKIYLFT  278 (281)
Q Consensus       239 l~~nl~~~i~~~~~--r~~li~~~i~~lh~~lal~~K~yFF~  278 (281)
                      |..++++..+++..  +..++++.++++|+++|+++|+|||.
T Consensus       236 L~~~l~p~~~~~~~~~~a~~~iv~ivllh~lla~~~~lyfF~  277 (290)
T KOG3114|consen  236 LAGTLWPAVRLDGILHFAFLLIVEIVLLHLLLALGFKLYFFD  277 (290)
T ss_pred             HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhccceeEEec
Confidence            99999999988762  34566778899999999999999997

>KOG2946 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.51  E-value=2.7e-13  Score=121.53  Aligned_cols=148  Identities=19%  Similarity=0.315  Sum_probs=114.8

Q ss_pred             CCChHHHHHHHhhcccCCCCCcc--cccCCCCCcchhHHHHHHHHHHHHHHhhHHHHhhhccCCcceeEEecchhhHHHH
Q 023517           93 DVDTSDVLERIKDSLFPFRDTFT--EKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGL  170 (281)
Q Consensus        93 dVdT~~V~~Rl~~sl~P~k~~f~--e~~~~~pDLYGPfWI~~TLIf~lai~gnl~~yl~~~~~~~~~~ydf~~v~~A~~l  170 (281)
                      +-|-.+|..|+++.++|.. .|.  .+..+.+|||||+-+|+-+.+++..++.          .++.        --++.
T Consensus        68 krD~~~I~~kl~~Vl~P~p-y~~dk~~~lRDwDlWGPl~~~~~la~iL~~s~~----------~~~~--------~vFs~  128 (234)
T KOG2946|consen   68 KRDLRAIGSKLKHVLYPHP-YFEDKGQLLRDWDLWGPLFFCVFLALILSLSGS----------VKSA--------SVFAV  128 (234)
T ss_pred             HHHHHHHHhceEEEEccCC-CcccccceeecccccchhHHHHHHHHHHHhhcC----------cccc--------hhHHH
Confidence            4577889999999999962 222  2356788999999999998888776553          1111        26778


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCchhhhHhhhccccchhHHHH-hhhhc-hhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 023517          171 FYGYVTIVPLCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPAL-CLSVV-PLEIFRWVIAGVAGFMSATFVALNLRAHIK  248 (281)
Q Consensus       171 iygY~~lvPlil~~~lk~~~~~~sl~~liclYGYSl~i~IPvs-iL~vi-p~~~lrWviv~~~~~~S~~fl~~nl~~~i~  248 (281)
                      ++..+|.+.+++++..|.+|.+.+++|.+|+.|||+++....+ +.|.. +...+|-++..+|.+||.+.-...+.....
T Consensus       129 vf~i~wfG~~vvtln~kLLGgnIs~fQsl~IlGYCLfPl~v~ali~~~~~~l~~lr~vv~~~~~~WSsyaa~~~l~~~~~  208 (234)
T KOG2946|consen  129 VFAILWFGAVVVTLNIKLLGGNISFFQSLCILGYCLFPLVVAALIICLFRDLFFLRLVVTSIGLAWSSYAAMGFLSISQL  208 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCceeEEeehhhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccc
Confidence            8999999999999999999999999999999999999999886 56665 667899999999999998776655544433


Q ss_pred             hcCcchhHHHHHH
Q 023517          249 SAGERWFLIVAAI  261 (281)
Q Consensus       249 ~~~~r~~li~~~i  261 (281)
                        ++||.+.+-.+
T Consensus       209 --~~kk~LavYPv  219 (234)
T KOG2946|consen  209 --PRKKLLAVYPV  219 (234)
T ss_pred             --ccccceehhhH
Confidence              55665544333

>KOG3103 consensus Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=99.15  E-value=5.3e-10  Score=101.43  Aligned_cols=154  Identities=17%  Similarity=0.322  Sum_probs=112.6

Q ss_pred             CCChHHHHHHHhhcccCCCCCcccccCCCCCcchhHHHHHHHHHHHHHHhhHHHHhhhccCCcceeEEecchhhHHHHHH
Q 023517           93 DVDTSDVLERIKDSLFPFRDTFTEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFY  172 (281)
Q Consensus        93 dVdT~~V~~Rl~~sl~P~k~~f~e~~~~~pDLYGPfWI~~TLIf~lai~gnl~~yl~~~~~~~~~~ydf~~v~~A~~liy  172 (281)
                      ++|-+++.+|.+..++|+|..= ..+.+++||.||+-.|..+-..+...|           +.++.|           ||
T Consensus        89 gInf~hI~~KT~~VLnP~r~~~-q~i~~d~DlaGPlvf~L~f~~flLl~g-----------Ki~Fgy-----------Iy  145 (249)
T KOG3103|consen   89 GINFDHIKQKTRAVLNPFRSAD-QSIMKDTDLAGPLVFCLLFGLFLLLAG-----------KIHFGY-----------IY  145 (249)
T ss_pred             CCCHHHHHHHHhheecccccCc-eEEecCcccccchHHHHHHHHHHHhcC-----------ceEEEE-----------Ee
Confidence            5889999999999999988642 347889999999888876654444322           223443           68


Q ss_pred             HHHHHHHHHHHHHHHHhc-CCCchhhhHhhhccccchhHHHHhhhhc-hh-HHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 023517          173 GYVTIVPLCLYIILKYFS-APSGLVQLFCLYGYSLFVFIPALCLSVV-PL-EIFRWVIAGVAGFMSATFVALNLRAHIKS  249 (281)
Q Consensus       173 gY~~lvPlil~~~lk~~~-~~~sl~~liclYGYSl~i~IPvsiL~vi-p~-~~lrWviv~~~~~~S~~fl~~nl~~~i~~  249 (281)
                      |.+.+..+-++.+++.++ .+.++.++.++.|||+.+.+..|.+.++ +. ..++.++.+++.+||+..-..-+-..+ +
T Consensus       146 gi~~~gsl~iy~L~nlm~~~nv~f~~~aSVlGYcLLPlvvlS~v~i~~~~~g~vg~il~~~~v~W~t~aaS~lfv~al-~  224 (249)
T KOG3103|consen  146 GISLLGSLSIYFLLNLMSNKNVSFGCVASVLGYCLLPLVVLSFVNIFVGLQGTVGYILSALFVLWCTYAASKLFVSAL-S  224 (249)
T ss_pred             eeHHHHHHHHHHHHHHHhhcCcceeeehHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHh-h
Confidence            888999999999999998 6789999999999999988888887665 33 578888888888898775544444433 3


Q ss_pred             cCcchhHHHHHHHHHHHHHHH
Q 023517          250 AGERWFLIVAAIFLLQLALAV  270 (281)
Q Consensus       250 ~~~r~~li~~~i~~lh~~lal  270 (281)
                      -++++.++.-.++++--++++
T Consensus       225 ~~~~rlLiaYp~~l~Y~~Fal  245 (249)
T KOG3103|consen  225 MENQRLLVAYPCALLYGVFAL  245 (249)
T ss_pred             ccccchhhhhHHHHHHhhhee
Confidence            345555554444444444443

>PF04893 Yip1: Yip1 domain; InterPro: IPR006977 This entry contains proteins belonging to the Yip1 family and represents the Yip1 domain

Probab=99.06  E-value=4.1e-09  Score=88.25  Aligned_cols=152  Identities=17%  Similarity=0.146  Sum_probs=105.8

Q ss_pred             cCCChHHHHHHHhhcccCCCCCcccccCCCCCcchhHHHHHHHHHHHHHHhhHHHHhhhccCCcceeEEecchhhHH---
Q 023517           92 FDVDTSDVLERIKDSLFPFRDTFTEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSA---  168 (281)
Q Consensus        92 FdVdT~~V~~Rl~~sl~P~k~~f~e~~~~~pDLYGPfWI~~TLIf~lai~gnl~~yl~~~~~~~~~~ydf~~v~~A~---  168 (281)
                      +.+++++..+|+++.-.         .++++|+|+++|+..++++.+....+...++.+..    +..+.+......   
T Consensus         1 vl~~P~~~f~~~~~~~~---------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~   67 (172)
T PF04893_consen    1 VLFSPREFFRRLRESPR---------ISKSWWLPLLLVILLTLVFGLLSSLNIPWYVDSGG----SAYMFSFGSLLGSII   67 (172)
T ss_pred             CccCHHHHHHHHHhccc---------cchhHHHHHHHHHHHHHHHHHHHHHhhhhhhccch----hhhhhhhHHHHHHHH
Confidence            35788888888887542         35679999999999999999998877666665431    112222222222   


Q ss_pred             ---HHHHHHHHHHHHHHHHHHHHhcCCCchhhhHhhhccccchhHHHHhhhhchhHH---HHHHHHHHHHHHHHHHHHHH
Q 023517          169 ---GLFYGYVTIVPLCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEI---FRWVIAGVAGFMSATFVALN  242 (281)
Q Consensus       169 ---~liygY~~lvPlil~~~lk~~~~~~sl~~liclYGYSl~i~IPvsiL~vip~~~---lrWviv~~~~~~S~~fl~~n  242 (281)
                         .....-.++.+.++|.+.|.+|.+.++.|.+|++|||.++.+...+++.+....   +...+..++.+|+..-+..-
T Consensus        68 ~~~~~~~i~~~i~~~~~~~~~~~~gg~~~~~~~~~~~~ya~~P~~~~~~~~~~~~~~~~~~~~~~~~l~~iw~~~l~~~g  147 (172)
T PF04893_consen   68 GGFIIILIGWFILALILHLIAKLFGGKGSFKETFSVVGYALIPLLLGSLISIILSLFFGPLSLLVIILFSIWSAYLLVIG  147 (172)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               222355667788999999999999999999999999998888888877764432   33456667888888766666


Q ss_pred             hhhhhhhcCcchhHH
Q 023517          243 LRAHIKSAGERWFLI  257 (281)
Q Consensus       243 l~~~i~~~~~r~~li  257 (281)
                      ++..- +.++++..+
T Consensus       148 l~~~~-~~~~~ka~~  161 (172)
T PF04893_consen  148 LREVH-RLSRGKAFL  161 (172)
T ss_pred             HHHHh-CCChhHHHH
Confidence            65443 334444433

The Yip1 integral membrane domain contains four transmembrane alpha helices. The domain is characterised by the motifs DLYGP and GY. The Yip1 protein is a golgi protein involved in vesicular transport that interacts with GTPases [].; GO: 0016020 membrane

>COG5080 YIP1 Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking and secretion]

Probab=98.95  E-value=3e-09  Score=95.10  Aligned_cols=138  Identities=20%  Similarity=0.334  Sum_probs=96.2

Q ss_pred             HHHHHHHhhcccCCCCCcccccCCCCCcchhHHHHHHHHHHHHHHhhHHHHhhhccCCcceeEEecchhhHHHHHHHHHH
Q 023517           97 SDVLERIKDSLFPFRDTFTEKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISHKVNNKDWNYDINLVPWSAGLFYGYVT  176 (281)
Q Consensus        97 ~~V~~Rl~~sl~P~k~~f~e~~~~~pDLYGPfWI~~TLIf~lai~gnl~~yl~~~~~~~~~~ydf~~v~~A~~liygY~~  176 (281)
                      ..++++....+.|++..- .++.+|.|||||+-.+  +.+.++.        ...+ +.           -++.+|+-.+
T Consensus        70 ~~i~~ks~~vl~p~~~~~-~~i~~d~DL~gPliF~--lL~sLfL--------sla~-~s-----------hFgyiy~isl  126 (227)
T COG5080          70 GHIKSKSDDVLGPFDNKA-FDILADCDLWGPLIFI--LLYSLFL--------SLAG-KS-----------HFGYIYGISL  126 (227)
T ss_pred             cccccccceeeecccccc-hhhhhcccccccHHHH--HHHHHHH--------Hhcc-cc-----------eeehhhHHHH
Confidence            456777778888876521 2478899999996443  3344443        2222 12           2345799999


Q ss_pred             HHHHHHHHHHHHhc-CCCchhhhHhhhccccchhHHHHhhhhc-h-hHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCcc
Q 023517          177 IVPLCLYIILKYFS-APSGLVQLFCLYGYSLFVFIPALCLSVV-P-LEIFRWVIAGVAGFMSATFVALNLRAHIKSAGER  253 (281)
Q Consensus       177 lvPlil~~~lk~~~-~~~sl~~liclYGYSl~i~IPvsiL~vi-p-~~~lrWviv~~~~~~S~~fl~~nl~~~i~~~~~r  253 (281)
                      .+-+.+.+.+|.+| .+.+++|.+|+.|||+++.+..+++|.+ + +.+.--++++++.+||.+...-.+.+.++ .+++
T Consensus       127 fg~lsl~~~lrLl~~~ni~f~~~~SIlGYs~lPlv~~slv~~i~~~i~i~~~vv~~l~~~Ws~~AaS~v~~~~l~-l~n~  205 (227)
T COG5080         127 FGTLSLHLLLRLLGHKNISFFSTISILGYSLLPLVFNSLVSIILGRILILGYVVVALFLIWSTYAASGVLKSKLQ-LSNK  205 (227)
T ss_pred             HHHHHHHHHHHHhccCceeeeehhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhH
Confidence            99999999999999 5689999999999999999999999987 2 33444556666778887766555544332 3465


Q ss_pred             hhHHH
Q 023517          254 WFLIV  258 (281)
Q Consensus       254 ~~li~  258 (281)
                      +++++
T Consensus       206 ~llv~  210 (227)
T COG5080         206 RLLVV  210 (227)
T ss_pred             HHHHH
Confidence            65554

>PF03878 YIF1: YIF1; InterPro: IPR005578 This family includes a number of eukaryotic proteins

Probab=98.92  E-value=1.4e-08  Score=93.26  Aligned_cols=157  Identities=24%  Similarity=0.323  Sum_probs=111.7

Q ss_pred             eeeeecccccCcCCChHHHHHHHhhcccCCCCC-cc-----------cccCCCCCcchhHHHHHHHHHHHHHHhhHHHHh
Q 023517           81 RAFTVAAYKPYFDVDTSDVLERIKDSLFPFRDT-FT-----------EKTSDNPDLYGPFWICSTLIFVAASIGTFVTYI  148 (281)
Q Consensus        81 ~~~si~yY~~yFdVdT~~V~~Rl~~sl~P~k~~-f~-----------e~~~~~pDLYGPfWI~~TLIf~lai~gnl~~yl  148 (281)
                      .+.+.+-.|.|||||++=|++||+--+.|+... ..           ...-.-||||=|..-..|-|.+.+..-.    +
T Consensus        32 ~~~~~~~lk~YF~V~n~YV~~KL~lllfPf~~k~W~r~~~~~~~~~Pr~DvNAPDLYIPlMa~vTYiLl~g~~~G----~  107 (240)
T PF03878_consen   32 RYVSVSSLKYYFAVDNSYVLKKLKLLLFPFLHKDWSRKYEQESYLPPREDVNAPDLYIPLMAFVTYILLSGLILG----L  107 (240)
T ss_pred             hhcCcccceeeEECCHHHHHHHHHHeecccccCCccccccccCCCCchhhccCcccccchHHHHHHHHHHHHHHH----h
Confidence            445566789999999999999999999997432 10           0112359999999999999887654332    1


Q ss_pred             hhccCCcceeEEecchhhHHHHHHHHHHHHHHHHHHHHHHhcC--CCchhhhHhhhccccchhHHHHhhhhchhHHHHHH
Q 023517          149 SHKVNNKDWNYDINLVPWSAGLFYGYVTIVPLCLYIILKYFSA--PSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWV  226 (281)
Q Consensus       149 ~~~~~~~~~~ydf~~v~~A~~liygY~~lvPlil~~~lk~~~~--~~sl~~liclYGYSl~i~IPvsiL~vip~~~lrWv  226 (281)
                      +       .+++=+.+...++-..+..++==++++..+..++.  +.++.|++|.-||.-+.-|.+.+...+--.+.-|+
T Consensus       108 ~-------g~F~Pe~Lg~~~s~al~~~~lEv~i~k~~~y~l~~~~~~~~lDlvay~GYKfv~ii~~~l~~~l~~~~~yy~  180 (240)
T PF03878_consen  108 Q-------GRFSPELLGIQASSALVWWFLEVLIIKLGLYLLNISSSLPILDLVAYSGYKFVGIILTLLASLLFGSWVYYI  180 (240)
T ss_pred             c-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHhhcchHHHHHHHHHHHHHcccHHHHH
Confidence            1       12233455556666666666656667777766776  67999999999999876665555544444477888


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhh
Q 023517          227 IAGVAGFMSATFVALNLRAHIK  248 (281)
Q Consensus       227 iv~~~~~~S~~fl~~nl~~~i~  248 (281)
                      ..+...+..+.|+++.++..+-
T Consensus       181 ~~ly~~~a~~~Fl~RsLk~~i~  202 (240)
T PF03878_consen  181 ALLYTSFANAFFLLRSLKRVIL  202 (240)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh
Confidence            8888888889999998877654

It is an integral membrane protein, conserved in at least 1 copy in all sequenced eukaryotes. The gene name in Schizosaccharomyces pombe (Fission yeast) is hrf1+ for Heavy metal Resistance Factor 1.

>KOG3094 consensus Predicted membrane protein [Function unknown]

Probab=98.50  E-value=9e-06  Score=75.14  Aligned_cols=183  Identities=20%  Similarity=0.251  Sum_probs=106.6

Q ss_pred             CCCceeeeeecccccCcCCChHHHHHHHhhcccCCCC-Ccc---c--------ccCCCCCcchhHHHHHHHHHHHHHHhh
Q 023517           76 SSGWFRAFTVAAYKPYFDVDTSDVLERIKDSLFPFRD-TFT---E--------KTSDNPDLYGPFWICSTLIFVAASIGT  143 (281)
Q Consensus        76 ~~g~~~~~si~yY~~yFdVdT~~V~~Rl~~sl~P~k~-~f~---e--------~~~~~pDLYGPfWI~~TLIf~lai~gn  143 (281)
                      +++..+.++..-.+-||+||+.=|.+||+--+.|+.. +..   |        ..-..||||=|..--+|=|.+....-.
T Consensus        74 ~~~~~k~~~~~~l~yYF~Vdn~YV~~KL~lilfPf~hk~W~~~~~~~~~~PPr~DvNaPDLYiP~MafiTYIll~gl~lG  153 (284)
T KOG3094|consen   74 EKNLGKYVSVPKLKYYFAVDNAYVGKKLKLILFPFLHKDWTRIYERESPLPPRYDVNAPDLYIPLMAFITYILLAGLLLG  153 (284)
T ss_pred             HHHhhhhccCccceEEEEechHHHhhhheEEEeeecCcchhhhhcccCCCCccccCCCcchhhhHHHHHHHHHHHHHHhh
Confidence            3333444555556778999999999999999999743 221   1        124579999999999988876543221


Q ss_pred             HHHHhhhccCCcceeEEecchhhHHHHHHHHHHHHHHHHHHHHHH-hcC--CCchhhhHhhhccccchhHHHHhhhhchh
Q 023517          144 FVTYISHKVNNKDWNYDINLVPWSAGLFYGYVTIVPLCLYIILKY-FSA--PSGLVQLFCLYGYSLFVFIPALCLSVVPL  220 (281)
Q Consensus       144 l~~yl~~~~~~~~~~ydf~~v~~A~~liygY~~lvPlil~~~lk~-~~~--~~sl~~liclYGYSl~i~IPvsiL~vip~  220 (281)
                          ++.+-+       =+.+.+-++--..++++ =+++..+..| +++  ..+.++++|.-||-.+..|.+.+.-.+-.
T Consensus       154 ----lqg~Fs-------PE~Lg~~~s~al~~v~l-e~l~l~l~lY~l~vs~~ls~ldllAysGYKfv~liL~~L~k~~~~  221 (284)
T KOG3094|consen  154 ----LQGRFS-------PEALGILASKALAWVIL-EVLLLKLGLYLLNVSSSLSTLDLLAYSGYKFVGLILAQLTKLLFG  221 (284)
T ss_pred             ----hccCCC-------HHHHHHHHHHHHHHHHH-HHHHHHHHHheecccCCcchhHhhhhcccchHHHHHHHHhhheec
Confidence                222211       12222233322333332 3333334444 454  67899999999999988887776655533


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhh-----c----CcchhHHHHHHHHHHHHHHH
Q 023517          221 EIFRWVIAGVAGFMSATFVALNLRAHIKS-----A----GERWFLIVAAIFLLQLALAV  270 (281)
Q Consensus       221 ~~lrWviv~~~~~~S~~fl~~nl~~~i~~-----~----~~r~~li~~~i~~lh~~lal  270 (281)
                      .+...++.+.-.+.-+.|+++.++..+-.     +    .+|+...+..+++.|..++.
T Consensus       222 ~~~yyi~~~yt~~a~gvFLlRSlK~~ll~~~~~~~~v~q~~r~~YfLf~ia~~Q~~~l~  280 (284)
T KOG3094|consen  222 PYGYYIALAYTYLAFGVFLLRSLKRALLAESSMADPVPQSSRRLYFLFFIAAVQFLILY  280 (284)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCccchhhhhHHHHHHHHHHHHHHHH
Confidence            33444444433334466888887766521     1    12343344445555655543

>COG5197 Predicted membrane protein [Function unknown]

Probab=98.32  E-value=1.2e-05  Score=72.86  Aligned_cols=153  Identities=21%  Similarity=0.290  Sum_probs=90.3

Q ss_pred             eeecccccCcCCChHHHHHHHhhcccCCCCC-cc-----------cccCCCCCcchhHHHHHHHHHHHHHHhhHHHHhhh
Q 023517           83 FTVAAYKPYFDVDTSDVLERIKDSLFPFRDT-FT-----------EKTSDNPDLYGPFWICSTLIFVAASIGTFVTYISH  150 (281)
Q Consensus        83 ~si~yY~~yFdVdT~~V~~Rl~~sl~P~k~~-f~-----------e~~~~~pDLYGPfWI~~TLIf~lai~gnl~~yl~~  150 (281)
                      .+..-.+-|||||++=|++|++--+.|+++. ..           .+....||+|=|..-.+|-|.+...-..    |+.
T Consensus        78 ~s~~~~~tYF~V~n~yVi~KL~LIlfPf~nk~W~r~gd~eg~~pp~~d~nsPdmY~P~M~fvtyILl~~~~~G----L~g  153 (284)
T COG5197          78 ASSQQISTYFQVSNRYVINKLKLILFPFLNKNWQRIGDSEGFLPPRDDVNSPDMYMPIMGFVTYILLWNTQQG----LKG  153 (284)
T ss_pred             ccccceeEEEEechHhHHhhhheEEeecccchhhhccCCCCCCCchhhcCCccccchHHHHHHHHHHHHHHhh----ccc
Confidence            4556678899999999999999999998652 21           1234689999999999998887665332    221


Q ss_pred             ccCCcceeEEecchhhHHHHHHHHHHHHHHHHHHHHHH---hcCCCchhhhHhhhccccchhHHHHhhhhchhHHHHHHH
Q 023517          151 KVNNKDWNYDINLVPWSAGLFYGYVTIVPLCLYIILKY---FSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVI  227 (281)
Q Consensus       151 ~~~~~~~~ydf~~v~~A~~liygY~~lvPlil~~~lk~---~~~~~sl~~liclYGYSl~i~IPvsiL~vip~~~lrWvi  227 (281)
                      .-+.+    |+.+....+..   .+ ++-+++.-+--|   .+...+++|++|.-||-.++.|...++-.+...|..=++
T Consensus       154 ~F~PE----~lg~~~s~~~a---~v-~v~~l~trlg~Yll~~s~~~~~ldllaysGYKfV~liL~qL~k~~~Mp~v~~i~  225 (284)
T COG5197         154 SFNPE----DLGYKLSSTLA---FV-CVDLLITRLGLYLLIDSKIPSFLDLLAYSGYKFVPLILAQLLKNVTMPFVLNIL  225 (284)
T ss_pred             CCCHH----HhhHHHHHHHH---HH-HHHHHHHHhceEEEeecccchhhhhhhhcccccHHHHHHHHhhhccccHHHHHH
Confidence            11111    22322222211   11 222222222222   234467899999999999887777776554433333333


Q ss_pred             HHHHHHHHHHHHHHHhhhhh
Q 023517          228 AGVAGFMSATFVALNLRAHI  247 (281)
Q Consensus       228 v~~~~~~S~~fl~~nl~~~i  247 (281)
                      ...--+.-+.|+.+.++-.+
T Consensus       226 ~~Ylyiaf~vFLlRSlK~~v  245 (284)
T COG5197         226 IFYLYIAFGVFLLRSLKFNV  245 (284)
T ss_pred             HHHHHHHHHHHHHHHHHHhh
Confidence            33333334557777665443

>PF06930 DUF1282: Protein of unknown function (DUF1282); InterPro: IPR009698 This entry represents several hypothetical proteins of around 200 residues in length

Probab=94.94  E-value=0.99  Score=38.89  Aligned_cols=88  Identities=13%  Similarity=0.144  Sum_probs=61.0

Q ss_pred             EecchhhHHHHHHHHHHH-HHHHHHH---HHHHhcCCCchhhhHhhhccccchhHHHHhhhhchhHHHHHHHHHHHHHHH
Q 023517          160 DINLVPWSAGLFYGYVTI-VPLCLYI---ILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMS  235 (281)
Q Consensus       160 df~~v~~A~~liygY~~l-vPlil~~---~lk~~~~~~sl~~liclYGYSl~i~IPvsiL~vip~~~lrWviv~~~~~~S  235 (281)
                      +.+........+.+|.++ +.+.-++   +.|-.+.+.++-|++-..||+.++.....++..+|..|+--....++..++
T Consensus        57 ~~~~~~~~~~~~~~~~~~gv~i~a~~i~~~~~~~~~~~s~~~~~~~a~y~~tPl~L~~i~~~~~~~~l~~~~~~~~~~~~  136 (170)
T PF06930_consen   57 KLTLASALIIAVIFYIFGGVFIMAYLIHWMMKTFGGRPSYKKCLAFAAYAATPLFLGGIVNLYPSLWLTLLVGLIALIYS  136 (170)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344444455555556555 4444443   444456778899999999999999988888888888766555556777888


Q ss_pred             HHHHHHHhhhhh
Q 023517          236 ATFVALNLRAHI  247 (281)
Q Consensus       236 ~~fl~~nl~~~i  247 (281)
                      ...++.-+....
T Consensus       137 ~~Lly~Gv~~~~  148 (170)
T PF06930_consen  137 VYLLYLGVPIFM  148 (170)
T ss_pred             HHHHHHHHHHHh
Confidence            887777664443

The function of is unknown although a number of the members are thought to be putative membrane proteins.

>PF10348 DUF2427: Domain of unknown function (DUF2427); InterPro: IPR018825 This entry represents the N-terminal region of a family of proteins conserved in fungi

Probab=84.38  E-value=2.9  Score=33.82  Aligned_cols=88  Identities=16%  Similarity=0.218  Sum_probs=53.5

Q ss_pred             EecchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhHhhhccccchhHHHHhhhhchhHHHHHHHHHHHHHHHHHHH
Q 023517          160 DINLVPWSAGLFYGYVTIVPLCLYIILKYFSAPSGLVQLFCLYGYSLFVFIPALCLSVVPLEIFRWVIAGVAGFMSATFV  239 (281)
Q Consensus       160 df~~v~~A~~liygY~~lvPlil~~~lk~~~~~~sl~~liclYGYSl~i~IPvsiL~vip~~~lrWviv~~~~~~S~~fl  239 (281)
                      |--+..+.+....+++++.|+.+-+.  -.+++                       +-+|...+.+++..+|.+....+-
T Consensus        15 ~~~l~~Hi~lm~la~~il~Pi~lvL~--~~~sr-----------------------~~~~~q~~~~~l~~~g~~~g~~~~   69 (105)
T PF10348_consen   15 RSALYAHIVLMTLAWVILYPIGLVLG--NARSR-----------------------WHLPVQTVFLVLMILGLFLGSVYN   69 (105)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHH--Hccch-----------------------HHHHHHHHHHHHHHHHHHHHHHHh
Confidence            44566778888888888888887532  22221                       234555566666666655554433


Q ss_pred             HHHhhhhh-h-hcCcchhHHHHHHHHHHHHHHHHHHH
Q 023517          240 ALNLRAHI-K-SAGERWFLIVAAIFLLQLALAVALKI  274 (281)
Q Consensus       240 ~~nl~~~i-~-~~~~r~~li~~~i~~lh~~lal~~K~  274 (281)
                        .-.|++ + ++-.|...++..+.++|.++++..|+
T Consensus        70 --~~~p~lyp~n~H~k~g~il~~l~~~q~~~gv~~~~  104 (105)
T PF10348_consen   70 --GSTPDLYPNNAHGKMGWILFVLMIVQVILGVILKL  104 (105)
T ss_pred             --cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence              223333 1 11234456667778899999999885

Several of these proteins are annotated as being Ftp1 but this could not be confirmed. Their function is not known.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00