Citrus Sinensis ID: 023558

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Protein Sequence
MSSLWSLAPCKITLWEHYPVQPSRLSLKLAISNASENKNHSLPLKLCCCDSSDSTAVIGSTNNNSAPPVMRKKKRVRYRREYPGESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERSEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQHWTRDEKNKSLKEAAKSFKFLGQIVRLIILL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEcccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccHHcccHHHHHHHHHcccccccccccccHccccccccccccccccccccccccEEEEEccccccccccHHccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
msslwslapckitlwehypvqpsrLSLKLAISNAsenknhslplklcccdssdstavigstnnnsappvmrkkkrvryrreypgeskgiTEEMRFVAMRLRNlkgkkypssphnsnsdcedssnddveheqevkqdndgetwkPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGlersegisrdlewfseqgiiipepstpgvsYAKYLEELAEKSAPLFLSHFYNIYfshvaggqvierqhwtrdEKNKSLKEAAKSFKFLGQIVRLIILL
Flexible Loop (DISEMBL)
msslwslaPCKITLWEHYPVQPSRLSLKLAISNASENKNHSLPLKLCCCDSSDSTAvigstnnnsappvmrkkkrvryrreypgeskgiteeMRFVAMRLRNLKgkkypssphnsnsdcedssnDDVEHEQEvkqdndgetwKPSMDAFVKYLVDSQLVFNTierivddsndVAYAYFRKtglersegisRDLEWFSEQgiiipepstpGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQHWTRDEKNKSLKEAAKSFKFLGQIVRLIILL
Low Complexity Region (SEG)
MSSLWSLAPCKITLWEHYPVQPSRLSLKLAISNASENKNHSLPLKLCCCDSSDSTAVIGSTNNNSAPPVMrkkkrvryrrEYPGESKGITEEMRFVAMRLRNLKGKKYPSSPHnsnsdcedssnddVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERSEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQHWTRDEKNKSLKEAAKSFKFLGQIVRLIILL
Disordered region (IsUnstruct)
***LWSLAPCKITLWEHYPVQPSRLSLKLAI*********SLPLKLCCCD***********************************************************************************************MDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERSEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQHWTR*********AAKSFKFLGQIVRLIIL*
Disordered Region (DISOPRED)
***************************************************************************************GITEEMRFVAMRL********************************************SMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERSEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ********KSLKEAAKSFKFLGQIVRLIILL
Disordered Region (DISEMBL)
MSSLWSLAPCKITLWEHYPVQPSRLSLKLAISNASENKNHSLPLKLCCCDSSDSTAVIGSTNNNSAPPVMRKKKRVRYRREYPGESKGITEEMRFVAMRLRNLKGK********************************GETWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERSEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQHWTRDEKNKSLKEAAKSFKFLGQIVRLIILL
Disordered Region (DISPRO)
**SLWSLAPCKITLWEHYPVQPSRLSLKLAISNASENKNHSLPLKLCCCDSSDSTAVIGSTNNN***************REYPGESKGITEEMRFVAMRLRNL***********************************GETWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERSEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQHWTRDEKNKSLKEAAKSFKFLGQIVRLIILL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSLWSLAPCKITLWEHYPVQPSRLSLKLAISNASENKNHSLPLKLCCCDSSDSTAVIGSTNNNSAPPVMRKKKRVRYRREYPGESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERSEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQHWTRDEKNKSLKEAAKSFKFLGQIVRLIILL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	280	2.2.26 [Sep-21-2011]
O48722	299	Probable inactive heme ox	yes	no	0.732	0.685	0.545	5e-66
Q10K62	330	Probable inactive heme ox	yes	no	0.739	0.627	0.449	2e-54
O48782	282	Heme oxygenase 1, chlorop	no	no	0.657	0.652	0.411	4e-46
Q9C9L4	285	Heme oxygenase 3, chlorop	no	no	0.703	0.691	0.392	4e-44
Q69XJ4	289	Heme oxygenase 1, chlorop	no	no	0.603	0.584	0.393	4e-39
Q9LQC0	283	Heme oxygenase 4, chlorop	no	no	0.632	0.625	0.382	7e-39

>sp|O48722|HMOX2_ARATH Probable inactive heme oxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=HO2 PE=1 SV=2

 Score =  251 bits (640), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 133/244 (54%), Positives = 166/244 (68%), Gaps = 39/244 (15%)

Query: 72  KKKRVRYRREYPGESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQ 131
           ++KR RYR++YPGE+ GITEEMRFVAMRLRN+ GKK   S    +    +   ++ E + 
Sbjct: 59  QRKRTRYRKQYPGENIGITEEMRFVAMRLRNVNGKKLDLS---EDKTDTEKEEEEEEEDD 115

Query: 132 EVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERSEGISR 191
           +   +   ETWKPS + F+KYLVDS+LVF+TIERIVD+S +V+YAYFR+TGLER E I +
Sbjct: 116 DDDDEVKEETWKPSKEGFLKYLVDSKLVFDTIERIVDESENVSYAYFRRTGLERCESIEK 175

Query: 192 DLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ-- 249
           DL+W  EQ ++IPEPS  GVSYAKYLEE A +SAPLFLSHFY+IYFSH+AGGQV+ RQ  
Sbjct: 176 DLQWLREQDLVIPEPSNVGVSYAKYLEEQAGESAPLFLSHFYSIYFSHIAGGQVLVRQVS 235

Query: 250 ----------------------------------HWTRDEKNKSLKEAAKSFKFLGQIVR 275
                                             HW+RDEKNK LKE AK+FK++GQIVR
Sbjct: 236 EKLLEGKELEFNRWEGDAQDLLKGVREKLNVLGEHWSRDEKNKCLKETAKAFKYMGQIVR 295

Query: 276 LIIL 279
           LIIL
Sbjct: 296 LIIL 299

Probable inactive heme oxygenase. Binds protoporphyrin IX, a precursor for both heme and chlorophyll biosynthesis. Plays a minor role in phytochrome assembly and photomorphogenesis.
Arabidopsis thaliana (taxid: 3702)

>sp|Q10K62|HMOX2_ORYSJ Probable inactive heme oxygenase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=HO2 PE=2 SV=1

 Score =  213 bits (541), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 120/267 (44%), Positives = 152/267 (56%), Gaps = 60/267 (22%)

Query: 67  PPVMRKKKRVRYRREYPGESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDD 126
           PP   K +  RY R+YPGE+ G+ EEMRFVAMRLRN K     ++    ++  E+   D 
Sbjct: 70  PPA--KPRPRRYPRQYPGEAVGVAEEMRFVAMRLRNPK----RTTLKMDDTGAEEEVGDG 123

Query: 127 VEHEQEVKQDNDGET------------------WKPSMDAFVKYLVDSQLVFNTIERIVD 168
           V  +    ++ + E                   W PSM+ FVKYLVDS+LVF+T+ERIV 
Sbjct: 124 VSEDASASEEEEEEEDDDDVVEEEEEGAGLEGEWMPSMEGFVKYLVDSKLVFDTVERIVA 183

Query: 169 DSNDVAYAYFRKTGLERSEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLF 228
           +S DVAY YFRK+GLERS  I++DLEWF  QGI +PEPST G +YA YL ELAE +AP F
Sbjct: 184 ESTDVAYVYFRKSGLERSARITKDLEWFGGQGIAVPEPSTAGSTYATYLTELAESNAPAF 243

Query: 229 LSHFYNIYFSHVAGGQVIER------------------------------------QHWT 252
           LSH+YNIYF+H  GG  I                                      +HW+
Sbjct: 244 LSHYYNIYFAHTTGGVAIGNKISKKILEGRELEFYKWDSDVELLLKDTREKLNELSKHWS 303

Query: 253 RDEKNKSLKEAAKSFKFLGQIVRLIIL 279
           R ++N  LKEAAK F+ LG+IVRLIIL
Sbjct: 304 RKDRNLCLKEAAKCFQHLGRIVRLIIL 330

Probable inactive heme oxygenase that may play a role in the regulation of phytochrome assembly and photomorphogenesis.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|O48782|HMOX1_ARATH Heme oxygenase 1, chloroplastic OS=Arabidopsis thaliana GN=HO1 PE=1 SV=2

 Score =  185 bits (469), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 98/238 (41%), Positives = 136/238 (57%), Gaps = 54/238 (22%)

Query: 77  RYRREYPGESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQD 136
           + ++ YPGESKG  EEMRFVAMRL            H  +   E         E+ V + 
Sbjct: 62  KQKKRYPGESKGFVEEMRFVAMRL------------HTKDQAKEGEKETKSIEERPVAK- 108

Query: 137 NDGETWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERSEGISRDLEWF 196
                W+P+++ ++++LVDS+LV++T+E I+ DSN   YA F+ TGLER+E +S DLEWF
Sbjct: 109 -----WEPTVEGYLRFLVDSKLVYDTLELIIQDSNFPTYAEFKNTGLERAEKLSTDLEWF 163

Query: 197 SEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIER-------- 248
            EQG  IPEP+ PG +Y++YL+ELAEK    F+ HFYNIYF+H AGG++I R        
Sbjct: 164 KEQGYEIPEPTAPGKTYSQYLKELAEKDPQAFICHFYNIYFAHSAGGRMIGRKVAERILD 223

Query: 249 ----------------------------QHWTRDEKNKSLKEAAKSFKFLGQIVRLII 278
                                       + WTR+EKN  L+E  KSFK+ G+I+RLI+
Sbjct: 224 NKELEFYKWDGELSQLLQNVREKLNKVAEEWTREEKNHCLEETEKSFKYSGEILRLIL 281

Key enzyme in the synthesis of the chromophore of the phytochrome family of plant photoreceptors. Catalyzes the opening of the heme ring to form the open-chain tetrapyrrole biliverdin IX with the release of iron and carbon monoxide (CO). Produces specifically the biliverdin IX-alpha isomer. Can form complex with heme, is ferredoxin-dependent and its activity is increased in the presence of ascorbate. Plays a role in salt acclimation signaling. May affect the plastid-to-nucleus signaling pathway by perturbing tetrapyrrole synthesis. The plastid-to-nucleus signal plays an important role in the coordinated expression of both nuclear- and chloroplast-localized genes that encode photosynthesis-related proteins.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 3

>sp|Q9C9L4|HMOX3_ARATH Heme oxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=HO3 PE=1 SV=1

 Score =  178 bits (452), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 100/255 (39%), Positives = 139/255 (54%), Gaps = 58/255 (22%)

Query: 62  NNNSAPPVMRKKKRVRYRREYPGESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCED 121
           N   A  V       + +++YPGESKG  EEMRFVAMRL                     
Sbjct: 50  NGGQASVVTAAAITEKQQKKYPGESKGFVEEMRFVAMRLH-------------------- 89

Query: 122 SSNDDVEHEQEVKQDNDGET--WKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFR 179
           + +   E E+E +   +G    W+P+++ ++ +LVDS+LV++T+E I+D SN   YA F+
Sbjct: 90  TKDQAREGEKESRSPEEGPVAKWEPTVEGYLHFLVDSKLVYDTLEGIIDGSNFPTYAGFK 149

Query: 180 KTGLERSEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSH 239
            TGLER+E + +DLEWF EQG  IPEP  PG +Y++YL++LAE     F+ HFYNIYF+H
Sbjct: 150 NTGLERAESLRKDLEWFKEQGYEIPEPMAPGKTYSEYLKDLAENDPQAFICHFYNIYFAH 209

Query: 240 VAGGQVIE-----------------------------RQH-------WTRDEKNKSLKEA 263
            AGGQ+I                              RQ        WTR+EK+  L+E 
Sbjct: 210 SAGGQMIGTKVSKKILDNKELEFYKWDGQLSQLLQNVRQKLNKVAEWWTREEKSHCLEET 269

Query: 264 AKSFKFLGQIVRLII 278
            KSFKF G+I+RLI+
Sbjct: 270 EKSFKFSGEILRLIL 284

Catalyzes the opening of the heme ring to form the open-chain tetrapyrrole biliverdin IX with the release of iron and carbon monoxide (CO). Produces specifically the biliverdin IX-alpha isomer. Plays a minor role in phytochrome assembly and photomorphogenesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 3

>sp|Q69XJ4|HMOX1_ORYSJ Heme oxygenase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=HO1 PE=2 SV=1

 Score =  161 bits (408), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 92/234 (39%), Positives = 121/234 (51%), Gaps = 65/234 (27%)

Query: 85  ESKGITEEMRFVAMRLRNL----KGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGE 140
           E K   EEMR VAMRL       +G+K P +P  +                         
Sbjct: 80  EGKPFVEEMRAVAMRLHTKDQAKEGEKEPQAPPVAR------------------------ 115

Query: 141 TWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERSEGISRDLEWFSEQG 200
            W+PS+D ++++LVDS+LVF T+E IVD +    YA FR TGLERSE + +DLEWF EQG
Sbjct: 116 -WEPSVDGYLRFLVDSKLVFETLETIVDRAAVPWYAEFRNTGLERSEQLKKDLEWFKEQG 174

Query: 201 IIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ----------- 249
             IPEPS PG +YA YLEELAEK +  F+ HFYN+YF+H AGG++I ++           
Sbjct: 175 HTIPEPSAPGTTYASYLEELAEKDSQAFICHFYNVYFAHTAGGRMIGKKVSENILNKKEL 234

Query: 250 -------------------------HWTRDEKNKSLKEAAKSFKFLGQIVRLII 278
                                     WTR+EK+  L E  KSF + G ++R I 
Sbjct: 235 EFYKWEGNLSQLLQNVRNKLNEVASSWTREEKDHCLDETEKSFSYSGDLLRHIF 288

Catalyzes the opening of the heme ring to form the open-chain tetrapyrrole biliverdin IX with the release of iron and carbon monoxide (CO). Is a key enzyme in the synthesis of the chromophore of the phytochrome family of plant photoreceptors. Essential for photoperiod response and repression of flowering through cytochromes that inhibit flowering by affecting both HD1 and EHD1 flowering pathways.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 3

>sp|Q9LQC0|HMOX4_ARATH Heme oxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=HO4 PE=1 SV=1

 Score =  160 bits (406), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 90/235 (38%), Positives = 124/235 (52%), Gaps = 58/235 (24%)

Query: 80  REYPGESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDG 139
           R YP E  G  EEMRFV M++           P +   + +  SND V            
Sbjct: 70  RRYPREPNGFVEEMRFVVMKIH----------PRDQVKEGKSDSNDLVS----------- 108

Query: 140 ETWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERSEGISRDLEWFSEQ 199
            TW  +++ ++K+LVDS+LVF T+ERI+++S   AYA  + TGLER+E +SRDLEWF EQ
Sbjct: 109 -TWNFTIEGYLKFLVDSKLVFETLERIINESAIQAYAGLKNTGLERAENLSRDLEWFKEQ 167

Query: 200 GIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIER----------- 248
           G  IPE   PG +Y++YL+ +AEK  P F+ HFYNI F+H AGG++I             
Sbjct: 168 GYEIPESMVPGKAYSQYLKNIAEKDPPAFICHFYNINFAHSAGGRMIGTKVAEKILDNKE 227

Query: 249 -------------------------QHWTRDEKNKSLKEAAKSFKFLGQIVRLII 278
                                    + WTR+EKN  L+E  KSFKF  +I R ++
Sbjct: 228 LEFYKWDGQLSELLQNVSEELNKVAELWTREEKNHCLEETEKSFKFYWEIFRYLL 282

Catalyzes the opening of the heme ring to form the open-chain tetrapyrrole biliverdin IX with the release of iron and carbon monoxide (CO). Produces specifically the biliverdin IX-alpha isomer. Plays a minor role in phytochrome assembly and photomorphogenesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 9

EC: 9

EC: .

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
224137394	309	predicted protein [Populus trichocarpa]	0.878	0.796	0.550	1e-75
449446977	329	PREDICTED: probable inactive heme oxygen	0.864	0.735	0.496	4e-72
225458539	289	PREDICTED: probable inactive heme oxygen	0.7	0.678	0.558	1e-70
255538394	318	conserved hypothetical protein [Ricinus	0.814	0.716	0.557	2e-70
350537003	368	heme oxygenase 2 [Solanum lycopersicum]	0.760	0.578	0.554	3e-66
334184487	299	heme oxygenase 2 [Arabidopsis thaliana]	0.732	0.685	0.545	3e-64
227133364	243	HO2 [synthetic construct]	0.732	0.843	0.540	5e-64
334184489	314	heme oxygenase 2 [Arabidopsis thaliana]	0.732	0.652	0.513	1e-62
317183996	290	heme oxygenase 2 [Medicago sativa]	0.696	0.672	0.519	2e-62
147792848	647	hypothetical protein VITISV_008807 [Viti	0.596	0.258	0.620	1e-60

>gi|224137394|ref|XP_002327115.1| predicted protein [Populus trichocarpa] gi|222835430|gb|EEE73865.1| predicted protein [Populus trichocarpa]

 Score =  289 bits (739), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 164/298 (55%), Positives = 200/298 (67%), Gaps = 52/298 (17%)

Query: 28  KLAISNASENKNHSLPLKLCCCDSSDSTAVIGSTNNNSAPPVMRKKKRVRYRREYPGESK 87
           +L   N  +NKNH +   + CC +S+S+    +T +   PPVM+K+KR  YR+ YPGE+K
Sbjct: 18  QLKFPNPIKNKNHKI---ITCCSNSNSSLPTTATPS-VGPPVMKKRKR--YRKPYPGENK 71

Query: 88  GITEEMRFVAMRLRNLKGK---KYPSSPHNSNSDCEDSSNDDVEHEQE-------VKQDN 137
           GITEEMRFVAM+LRN+KGK   K   S  + +  C+DS ND V  ++E          D 
Sbjct: 72  GITEEMRFVAMKLRNIKGKHTHKTVKSDDDDDDSCQDSENDSVSEKEEEGNGDGDGDGDG 131

Query: 138 DGETWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERSEGISRDLEWFS 197
           DG+ W P M+ FVKYLVDS+LVF+T+ERIVD S DV+Y YFRKTGLERSEG+++DLEWFS
Sbjct: 132 DGDIWIPGMEGFVKYLVDSKLVFDTLERIVDKSEDVSYTYFRKTGLERSEGLAKDLEWFS 191

Query: 198 EQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIER--------- 248
           ++ I IPEPSTPG SY KYLEELAE +APLFLSHFYNIYFSH+AGGQVI R         
Sbjct: 192 QRNIEIPEPSTPGTSYVKYLEELAEDNAPLFLSHFYNIYFSHIAGGQVISRKVSDKILQG 251

Query: 249 ---------------------------QHWTRDEKNKSLKEAAKSFKFLGQIVRLIIL 279
                                      +HWTRDEKNK LKEAAKSF++LGQIVRLIIL
Sbjct: 252 RELEFYRWDGDAQELLKGVREKLNMLGEHWTRDEKNKCLKEAAKSFRYLGQIVRLIIL 309

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449446977|ref|XP_004141246.1| PREDICTED: probable inactive heme oxygenase 2, chloroplastic-like [Cucumis sativus] gi|449520525|ref|XP_004167284.1| PREDICTED: probable inactive heme oxygenase 2, chloroplastic-like [Cucumis sativus]

 Score =  277 bits (708), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 156/314 (49%), Positives = 204/314 (64%), Gaps = 72/314 (22%)

Query: 22  PSR--LSLKLAISNASENKNHSLPLKLCCCDSSDS---TAVIGSTNNNSAPPVMRKKKRV 76
           PSR  ++ K+ ++     +N    L+LCC DS+ S   T+   +     APPV++++KR 
Sbjct: 30  PSRPLMNCKIVMTRKMSFRNGG-ALRLCCSDSNHSAPLTSTTAAATGGPAPPVLKRRKRY 88

Query: 77  RYRREYPGESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQD 136
           R  REYPGESKGITEE+RFVAMRL N+ GKK        + D  DSS++D     EV + 
Sbjct: 89  R--REYPGESKGITEELRFVAMRLLNVNGKKL-------SGDAVDSSSED-----EVGEK 134

Query: 137 NDG----------------ETWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRK 180
            DG                +TW PS++ F+KYLVDS+LVF+T+ERIVD+S+DVAY+YFRK
Sbjct: 135 GDGDLALSDDDNDENGDGTQTWDPSLEGFLKYLVDSKLVFSTVERIVDESSDVAYSYFRK 194

Query: 181 TGLERSEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHV 240
           +G+ERSEG+++DLEWF EQGI+IPEP+ PGVSYAKYLEELAE+SAPLFL H+YNIYFSH+
Sbjct: 195 SGMERSEGLAKDLEWFREQGIVIPEPTIPGVSYAKYLEELAERSAPLFLCHYYNIYFSHI 254

Query: 241 AGGQVIER------------------------------------QHWTRDEKNKSLKEAA 264
           AGGQVI +                                    +HW+RD++NK L+EA 
Sbjct: 255 AGGQVIAKRVSERLLEGRELEFYTWAGDAEELLKNVREKLNMLGEHWSRDDRNKCLREAT 314

Query: 265 KSFKFLGQIVRLII 278
           K+F+FLGQIVRLII
Sbjct: 315 KTFRFLGQIVRLII 328

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458539|ref|XP_002282356.1| PREDICTED: probable inactive heme oxygenase 2, chloroplastic [Vitis vinifera] gi|302142360|emb|CBI19563.3| unnamed protein product [Vitis vinifera]

 Score =  272 bits (696), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 138/247 (55%), Positives = 167/247 (67%), Gaps = 51/247 (20%)

Query: 68  PVMRKKKRVRYRREYPGESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDV 127
           P+   KKR RYR++YPGES GITEEMRFVAM+LRN      P +      +  +  NDD 
Sbjct: 57  PLQVVKKRKRYRKQYPGESTGITEEMRFVAMKLRNT-----PKTNITHKEEESEEYNDD- 110

Query: 128 EHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERSE 187
                   D DG TW+PSM+ F+KYLVDS+L+FNT++RI+DDS DV+YAYFR+TGLERS 
Sbjct: 111 --------DGDG-TWQPSMEGFLKYLVDSKLIFNTVDRIIDDSQDVSYAYFRRTGLERSG 161

Query: 188 GISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIE 247
           G+S+DLEWFS+Q ++IP PS PGVSYA+YLEE+AEKSAPLFL HFYNIYFSH+AGGQVI 
Sbjct: 162 GLSKDLEWFSQQNMVIPPPSNPGVSYAQYLEEIAEKSAPLFLCHFYNIYFSHIAGGQVIA 221

Query: 248 R------------------------------------QHWTRDEKNKSLKEAAKSFKFLG 271
           R                                    +HWTRDEKNK L+E  KSF+F+G
Sbjct: 222 RRVSEKLLEGRELEFYKWEGDVQELFKGVREKLNMLGEHWTRDEKNKCLRETTKSFRFMG 281

Query: 272 QIVRLII 278
           QIVRLII
Sbjct: 282 QIVRLII 288

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538394|ref|XP_002510262.1| conserved hypothetical protein [Ricinus communis] gi|223550963|gb|EEF52449.1| conserved hypothetical protein [Ricinus communis]

 Score =  271 bits (694), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/269 (55%), Positives = 188/269 (69%), Gaps = 41/269 (15%)

Query: 46  LCCCDSSDSTAVIGSTNNNSAPPVMRKKKRVRYRREYPGESKGITEEMRFVAMRLRNLKG 105
           +CC +SS S +   +TN    PPV++K+KR  YR+ YPGE KGITEEMRFVAMRLRN+KG
Sbjct: 54  VCCSNSSSSISTAAATN--MGPPVIKKRKR--YRKPYPGEKKGITEEMRFVAMRLRNVKG 109

Query: 106 KKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIER 165
           K Y     +S+ + +  SN + + E E + + +GE W  +M+ FVKYLV+S+LVF+T+ER
Sbjct: 110 K-YTHKSISSDDENDVVSNKEEKEESEGEGEGEGERWVANMEGFVKYLVNSKLVFDTVER 168

Query: 166 IVDDSNDVAYAYFRKTGLERSEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSA 225
           IVD S+DV+Y YFR+TG+ERS G+++DLEW S+Q I+IPEPSTPGVSYAKYLEELAEK+A
Sbjct: 169 IVDKSDDVSYTYFRRTGMERSAGLAQDLEWLSQQDIMIPEPSTPGVSYAKYLEELAEKNA 228

Query: 226 PLFLSHFYNIYFSHVAGGQVIERQ------------------------------------ 249
           PLFL HFYNIYFSH+AGGQVI RQ                                    
Sbjct: 229 PLFLCHFYNIYFSHLAGGQVIGRQVSEELLEGRELEFYRWEGDAQELLKGVRDNLNMLGE 288

Query: 250 HWTRDEKNKSLKEAAKSFKFLGQIVRLII 278
           HW+RD KNK LKEA KSF++LGQIVRLII
Sbjct: 289 HWSRDVKNKCLKEATKSFRYLGQIVRLII 317

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350537003|ref|NP_001234531.1| heme oxygenase 2 [Solanum lycopersicum] gi|14485577|gb|AAK63013.1|AF320029_1 heme oxygenase 2 [Solanum lycopersicum]

 Score =  258 bits (658), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 138/249 (55%), Positives = 170/249 (68%), Gaps = 36/249 (14%)

Query: 67  PPVMRKKKRVRYRREYPGESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDD 126
           PPV RK+KR RYR++YPGE KGITEEMRFVAM+ RN KGKK   S      D  +S + D
Sbjct: 120 PPVKRKRKRRRYRKQYPGEKKGITEEMRFVAMKFRNSKGKKKSESDDEMKDDGYESVSSD 179

Query: 127 VEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERS 186
            +            TW+PS++ F+KYLVDS+LVF+TIERIVD+S+DV+YAYFR+TGLER+
Sbjct: 180 EDDVGGGGSGGGEATWQPSIEGFLKYLVDSKLVFSTIERIVDESSDVSYAYFRRTGLERT 239

Query: 187 EGISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVI 246
           E IS+DL+WF +QG  IPEPS PGV+YA YLEELAEK+  LFLSHFYNIYFSH+AGGQVI
Sbjct: 240 ECISKDLKWFGQQGHEIPEPSIPGVTYANYLEELAEKTPRLFLSHFYNIYFSHIAGGQVI 299

Query: 247 ER------------------------------------QHWTRDEKNKSLKEAAKSFKFL 270
            +                                    +HW+RD+KNKSL+E  K+F+F+
Sbjct: 300 AKKAFERLLEEKELEFYKWEGDEEKLLRDVRDSFNMLAKHWSRDDKNKSLREVTKAFRFM 359

Query: 271 GQIVRLIIL 279
           GQIVRLIIL
Sbjct: 360 GQIVRLIIL 368

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|334184487|ref|NP_001189610.1| heme oxygenase 2 [Arabidopsis thaliana] gi|75219492|sp|O48722.2|HMOX2_ARATH RecName: Full=Probable inactive heme oxygenase 2, chloroplastic; Short=AtHO2; Flags: Precursor gi|4530595|gb|AAD22109.1| heme oxygenase 2 [Arabidopsis thaliana] gi|6598375|gb|AAC14503.2| heme oxygenase 2 (HO2) [Arabidopsis thaliana] gi|330252762|gb|AEC07856.1| heme oxygenase 2 [Arabidopsis thaliana]

 Score =  251 bits (640), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 133/244 (54%), Positives = 166/244 (68%), Gaps = 39/244 (15%)

Query: 72  KKKRVRYRREYPGESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQ 131
           ++KR RYR++YPGE+ GITEEMRFVAMRLRN+ GKK   S    +    +   ++ E + 
Sbjct: 59  QRKRTRYRKQYPGENIGITEEMRFVAMRLRNVNGKKLDLS---EDKTDTEKEEEEEEEDD 115

Query: 132 EVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERSEGISR 191
           +   +   ETWKPS + F+KYLVDS+LVF+TIERIVD+S +V+YAYFR+TGLER E I +
Sbjct: 116 DDDDEVKEETWKPSKEGFLKYLVDSKLVFDTIERIVDESENVSYAYFRRTGLERCESIEK 175

Query: 192 DLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ-- 249
           DL+W  EQ ++IPEPS  GVSYAKYLEE A +SAPLFLSHFY+IYFSH+AGGQV+ RQ  
Sbjct: 176 DLQWLREQDLVIPEPSNVGVSYAKYLEEQAGESAPLFLSHFYSIYFSHIAGGQVLVRQVS 235

Query: 250 ----------------------------------HWTRDEKNKSLKEAAKSFKFLGQIVR 275
                                             HW+RDEKNK LKE AK+FK++GQIVR
Sbjct: 236 EKLLEGKELEFNRWEGDAQDLLKGVREKLNVLGEHWSRDEKNKCLKETAKAFKYMGQIVR 295

Query: 276 LIIL 279
           LIIL
Sbjct: 296 LIIL 299

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|227133364|gb|ACP19712.1| HO2 [synthetic construct]

 Score =  250 bits (639), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 132/244 (54%), Positives = 170/244 (69%), Gaps = 39/244 (15%)

Query: 72  KKKRVRYRREYPGESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQ 131
           ++KR RYR++YPGE+ GITEEMRFVAMRLRN+ GKK   S   ++++ E+   ++ + + 
Sbjct: 3   QRKRTRYRKQYPGENIGITEEMRFVAMRLRNVNGKKLDLSEDKTDTEKEEEEEEEDDDDD 62

Query: 132 EVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERSEGISR 191
           +  ++    TWKPS + F+KYLVDS+LVF+TIERIVD+S +V+YAYFR+TGLER E I +
Sbjct: 63  DEVKEE---TWKPSKEGFLKYLVDSKLVFDTIERIVDESENVSYAYFRRTGLERCESIEK 119

Query: 192 DLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ-- 249
           DL+W  EQ ++IPEPS  GVSYAKYLEE A +SAPLFLSHFY+IYFSH+AGGQV+ RQ  
Sbjct: 120 DLQWLREQDLVIPEPSNVGVSYAKYLEEQAGESAPLFLSHFYSIYFSHIAGGQVLVRQVS 179

Query: 250 ----------------------------------HWTRDEKNKSLKEAAKSFKFLGQIVR 275
                                             HW+RDEKNK LKE AK+FK++GQIVR
Sbjct: 180 EKLLEGKELEFNRWEGDAQDLLKGVREKLNVLGEHWSRDEKNKCLKETAKAFKYMGQIVR 239

Query: 276 LIIL 279
           LIIL
Sbjct: 240 LIIL 243

Source: synthetic construct

Species: synthetic construct

Genus: N/A

Family: N/A

Order: N/A

Class: N/A

Phylum: N/A

>gi|334184489|ref|NP_001189611.1| heme oxygenase 2 [Arabidopsis thaliana] gi|330252763|gb|AEC07857.1| heme oxygenase 2 [Arabidopsis thaliana]

 Score =  245 bits (626), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 133/259 (51%), Positives = 166/259 (64%), Gaps = 54/259 (20%)

Query: 72  KKKRVRYRREYPGESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQ 131
           ++KR RYR++YPGE+ GITEEMRFVAMRLRN+ GKK   S    +    +   ++ E + 
Sbjct: 59  QRKRTRYRKQYPGENIGITEEMRFVAMRLRNVNGKKLDLS---EDKTDTEKEEEEEEEDD 115

Query: 132 EVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERSEGISR 191
           +   +   ETWKPS + F+KYLVDS+LVF+TIERIVD+S +V+YAYFR+TGLER E I +
Sbjct: 116 DDDDEVKEETWKPSKEGFLKYLVDSKLVFDTIERIVDESENVSYAYFRRTGLERCESIEK 175

Query: 192 DLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ-- 249
           DL+W  EQ ++IPEPS  GVSYAKYLEE A +SAPLFLSHFY+IYFSH+AGGQV+ RQ  
Sbjct: 176 DLQWLREQDLVIPEPSNVGVSYAKYLEEQAGESAPLFLSHFYSIYFSHIAGGQVLVRQYT 235

Query: 250 -------------------------------------------------HWTRDEKNKSL 260
                                                            HW+RDEKNK L
Sbjct: 236 FHTLLVVKLFVRQVSEKLLEGKELEFNRWEGDAQDLLKGVREKLNVLGEHWSRDEKNKCL 295

Query: 261 KEAAKSFKFLGQIVRLIIL 279
           KE AK+FK++GQIVRLIIL
Sbjct: 296 KETAKAFKYMGQIVRLIIL 314

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|317183996|gb|ADV15621.1| heme oxygenase 2 [Medicago sativa]

 Score =  244 bits (624), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 131/252 (51%), Positives = 160/252 (63%), Gaps = 57/252 (22%)

Query: 67  PPVMRKKKRVRYRREYPGESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDD 126
           PP++RK  R RYR+ YPGE+ GITEEMRFVAM+L N K  K   +   S           
Sbjct: 57  PPLVRK--RNRYRKLYPGETTGITEEMRFVAMKLYNDKTNKTVVNNTTSVV--------- 105

Query: 127 VEHEQEVKQDNDGE---TWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGL 183
                   QD++G+   TW PSM  F+++LVD+QLVF T+ERIVDDS++V+YAY RKTGL
Sbjct: 106 -------VQDDEGQIPDTWYPSMKGFLRFLVDNQLVFATLERIVDDSDNVSYAYLRKTGL 158

Query: 184 ERSEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGG 243
           ERSE I +DLEW  E+G+ IP PS+PG +YAKYLEELAE+SAPLFLSHFYNI+FSH+  G
Sbjct: 159 ERSEAILKDLEWLKEEGVEIPNPSSPGTTYAKYLEELAERSAPLFLSHFYNIHFSHITAG 218

Query: 244 QVIERQ------------------------------------HWTRDEKNKSLKEAAKSF 267
           QVI +Q                                    HW RDEKNK L+E  KSF
Sbjct: 219 QVITKQVSEKLLEGKELEFCKWEGDVQEMLKDVREKLNVLAEHWGRDEKNKCLRETKKSF 278

Query: 268 KFLGQIVRLIIL 279
           +F+GQIVRLIIL
Sbjct: 279 QFMGQIVRLIIL 290

Source: Medicago sativa

Species: Medicago sativa

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147792848|emb|CAN68800.1| hypothetical protein VITISV_008807 [Vitis vinifera]

 Score =  238 bits (608), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 113/182 (62%), Positives = 140/182 (76%), Gaps = 15/182 (8%)

Query: 68  PVMRKKKRVRYRREYPGESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDV 127
           P+   KKR RYR++YPGES GITEEMRFVAM+LRN      P +      +  +  NDD 
Sbjct: 57  PLQVVKKRKRYRKQYPGESTGITEEMRFVAMKLRNT-----PKTNITHKEEESEEYNDD- 110

Query: 128 EHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERSE 187
                   D DG TW+PSM+ F+KYLVDS+L+FNT++RI+DDS DV+YAYFR+TGLERS 
Sbjct: 111 --------DGDG-TWQPSMEGFLKYLVDSKLIFNTVDRIIDDSQDVSYAYFRRTGLERSG 161

Query: 188 GISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIE 247
           G+S+D+EWFS+Q ++IP PS PGV YA+YLEE+AEKSAPLFL HFYNIYFSH+AGGQVI 
Sbjct: 162 GLSKDIEWFSQQNMVIPPPSNPGVCYAQYLEEIAEKSAPLFLCHFYNIYFSHIAGGQVIA 221

Query: 248 RQ 249
           R+
Sbjct: 222 RR 223

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
TAIR|locus:2066271	354	HO2 "heme oxygenase 2" [Arabid	0.582	0.460	0.627	6.1e-64
TAIR|locus:2005513	282	TED4 "REVERSAL OF THE DET PHEN	0.521	0.517	0.467	3.2e-41
TAIR|locus:2205045	285	HO3 "heme oxygenase 3" [Arabid	0.521	0.512	0.447	2.8e-40
UNIPROTKB|Q69XJ4	289	HO1 "Heme oxygenase 1, chlorop	0.471	0.456	0.507	1.5e-37
TAIR|locus:2016635	283	HO4 "heme oxygenase 4" [Arabid	0.6	0.593	0.420	8.8e-31

TAIR|locus:2066271 HO2 "heme oxygenase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 537 (194.1 bits), Expect = 6.1e-64, Sum P(2) = 6.1e-64
 Identities = 108/172 (62%), Positives = 129/172 (75%)

Query:    81 EYPGESKGITEEMRFVAMRLRNLKGKKYPSSPHXXXXXXXXXXXXXVEHEQEVKQDNDG- 139
             +YPGE+ GITEEMRFVAMRLRN+ GKK   S                E E+E   D+D  
Sbjct:    68 QYPGENIGITEEMRFVAMRLRNVNGKKLDLSEDKTDTEKEE------EEEEEDDDDDDEV 121

Query:   140 --ETWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERSEGISRDLEWFS 197
               ETWKPS + F+KYLVDS+LVF+TIERIVD+S +V+YAYFR+TGLER E I +DL+W  
Sbjct:   122 KEETWKPSKEGFLKYLVDSKLVFDTIERIVDESENVSYAYFRRTGLERCESIEKDLQWLR 181

Query:   198 EQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ 249
             EQ ++IPEPS  GVSYAKYLEE A +SAPLFLSHFY+IYFSH+AGGQV+ RQ
Sbjct:   182 EQDLVIPEPSNVGVSYAKYLEEQAGESAPLFLSHFYSIYFSHIAGGQVLVRQ 233

GO:0004392 "heme oxygenase (decyclizing) activity" evidence=IEA;ISS;IDA

GO:0006788 "heme oxidation" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0010024 "phytochromobilin biosynthetic process" evidence=IMP

GO:0020037 "heme binding" evidence=IDA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

TAIR|locus:2005513 TED4 "REVERSAL OF THE DET PHENOTYPE 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 363 (132.8 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
 Identities = 71/152 (46%), Positives = 107/152 (70%)

Query:   128 EHEQEVK--QDNDGETWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLER 185
             E E+E K  ++     W+P+++ ++++LVDS+LV++T+E I+ DSN   YA F+ TGLER
Sbjct:    93 EGEKETKSIEERPVAKWEPTVEGYLRFLVDSKLVYDTLELIIQDSNFPTYAEFKNTGLER 152

Query:   186 SEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQV 245
             +E +S DLEWF EQG  IPEP+ PG +Y++YL+ELAEK    F+ HFYNIYF+H AGG++
Sbjct:   153 AEKLSTDLEWFKEQGYEIPEPTAPGKTYSQYLKELAEKDPQAFICHFYNIYFAHSAGGRM 212

Query:   246 IERQHWTRDEKNKSLKEAAKSFKFLGQIVRLI 277
             I R+   R   NK L+     +K+ G++ +L+
Sbjct:   213 IGRKVAERILDNKELE----FYKWDGELSQLL 240

GO:0004392 "heme oxygenase (decyclizing) activity" evidence=IEA;IDA

GO:0006788 "heme oxidation" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009585 "red, far-red light phototransduction" evidence=IMP

GO:0010024 "phytochromobilin biosynthetic process" evidence=IDA

GO:0010075 "regulation of meristem growth" evidence=IGI

GO:0020037 "heme binding" evidence=IDA

GO:0009813 "flavonoid biosynthetic process" evidence=IMP

GO:0016117 "carotenoid biosynthetic process" evidence=IMP

GO:0071494 "cellular response to UV-C" evidence=IMP

GO:0010019 "chloroplast-nucleus signaling pathway" evidence=IMP

TAIR|locus:2205045 HO3 "heme oxygenase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 349 (127.9 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
 Identities = 68/152 (44%), Positives = 103/152 (67%)

Query:   128 EHEQEVKQDNDGET--WKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLER 185
             E E+E +   +G    W+P+++ ++ +LVDS+LV++T+E I+D SN   YA F+ TGLER
Sbjct:    96 EGEKESRSPEEGPVAKWEPTVEGYLHFLVDSKLVYDTLEGIIDGSNFPTYAGFKNTGLER 155

Query:   186 SEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQV 245
             +E + +DLEWF EQG  IPEP  PG +Y++YL++LAE     F+ HFYNIYF+H AGGQ+
Sbjct:   156 AESLRKDLEWFKEQGYEIPEPMAPGKTYSEYLKDLAENDPQAFICHFYNIYFAHSAGGQM 215

Query:   246 IERQHWTRDEKNKSLKEAAKSFKFLGQIVRLI 277
             I  +   +   NK L+     +K+ GQ+ +L+
Sbjct:   216 IGTKVSKKILDNKELE----FYKWDGQLSQLL 243

GO:0004392 "heme oxygenase (decyclizing) activity" evidence=IEA;ISS;IDA

GO:0006788 "heme oxidation" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0020037 "heme binding" evidence=IDA

UNIPROTKB|Q69XJ4 HO1 "Heme oxygenase 1, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 362 (132.5 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
 Identities = 69/136 (50%), Positives = 97/136 (71%)

Query:   142 WKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERSEGISRDLEWFSEQGI 201
             W+PS+D ++++LVDS+LVF T+E IVD +    YA FR TGLERSE + +DLEWF EQG 
Sbjct:   116 WEPSVDGYLRFLVDSKLVFETLETIVDRAAVPWYAEFRNTGLERSEQLKKDLEWFKEQGH 175

Query:   202 IIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQHWTRDEKNKSLK 261
              IPEPS PG +YA YLEELAEK +  F+ HFYN+YF+H AGG++I +    +  +N   K
Sbjct:   176 TIPEPSAPGTTYASYLEELAEKDSQAFICHFYNVYFAHTAGGRMIGK----KVSENILNK 231

Query:   262 EAAKSFKFLGQIVRLI 277
             +  + +K+ G + +L+
Sbjct:   232 KELEFYKWEGNLSQLL 247

GO:0004392 "heme oxygenase (decyclizing) activity" evidence=ISS

GO:0006788 "heme oxidation" evidence=ISS

GO:0009648 "photoperiodism" evidence=IGI

GO:0010229 "inflorescence development" evidence=IGI

GO:0048573 "photoperiodism, flowering" evidence=IMP

TAIR|locus:2016635 HO4 "heme oxygenase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 74/176 (42%), Positives = 108/176 (61%)

Query:   106 KKYPSSPHXXXXXXXXXXXXXVEHEQ--EVKQD-ND-GETWKPSMDAFVKYLVDSQLVFN 161
             ++YP  P+                +Q  E K D ND   TW  +++ ++K+LVDS+LVF 
Sbjct:    70 RRYPREPNGFVEEMRFVVMKIHPRDQVKEGKSDSNDLVSTWNFTIEGYLKFLVDSKLVFE 129

Query:   162 TIERIVDDSNDVAYAYFRKTGLERSEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELA 221
             T+ERI+++S   AYA  + TGLER+E +SRDLEWF EQG  IPE   PG +Y++YL+ +A
Sbjct:   130 TLERIINESAIQAYAGLKNTGLERAENLSRDLEWFKEQGYEIPESMVPGKAYSQYLKNIA 189

Query:   222 EKSAPLFLSHFYNIYFSHVAGGQVIERQHWTRDEKNKSLKEAAKSFKFLGQIVRLI 277
             EK  P F+ HFYNI F+H AGG++I  +   +   NK L+     +K+ GQ+  L+
Sbjct:   190 EKDPPAFICHFYNINFAHSAGGRMIGTKVAEKILDNKELE----FYKWDGQLSELL 241


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.132   0.391    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      280       257   0.00086  114 3  11 22  0.50    33
                                                     32  0.48    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  211 KB (2117 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.09u 0.11s 22.20t   Elapsed:  00:00:01
  Total cpu time:  22.09u 0.11s 22.20t   Elapsed:  00:00:01
  Start:  Fri May 10 08:11:33 2013   End:  Fri May 10 08:11:34 2013

GO:0004392 "heme oxygenase (decyclizing) activity" evidence=IEA;IDA

GO:0006788 "heme oxidation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0020037 "heme binding" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O48722	HMOX2_ARATH	No assigned EC number	0.5450	0.7321	0.6856	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00014766001 SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (289 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	280
cd00232	203	cd00232, HemeO, Heme oxygenase catalyzes the rate	7e-37
pfam01126	204	pfam01126, Heme_oxygenase, Heme oxygenase	0.001
COG5398	238	COG5398, COG5398, Heme oxygenase [Inorganic ion tr	0.002

>gnl|CDD|238143 cd00232, HemeO, Heme oxygenase catalyzes the rate limiting step in the degradation of heme to bilirubin, it is essential for recycling of iron from heme

 Score =  129 bits (327), Expect = 7e-37
 Identities = 38/175 (21%), Positives = 70/175 (40%), Gaps = 38/175 (21%)

Query: 141 TWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYA-YFRKTGLERSEGISRDLEWFSEQ 199
               S + + ++L +  LV+  +E +++ S D  Y        LER+  + +DL +    
Sbjct: 28  KGFLSREGYARFLANLYLVYRALEALLEASKDNPYLAPLYLPELERAAALEKDLAYLGGS 87

Query: 200 GIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVI------------- 246
              + EP  P  +YA  L E+AE++  L L H Y  Y + ++GGQV+             
Sbjct: 88  DWRVREPPLPAAAYAARLREIAEENPALLLGHAYVRYGADLSGGQVLAKIAQRALLLEGK 147

Query: 247 ------------------------ERQHWTRDEKNKSLKEAAKSFKFLGQIVRLI 277
                                   +      +E+ + + EA  +F+  GQ+ R +
Sbjct: 148 GLAFYAFHGIADRGLFKREFREALDALPLDEEERQRVVAEARAAFRLNGQVFREL 202

Heme is used as a substrate and cofactor for its own degradation to biliverdin, iron, and carbon monoxide. This family includes bacterial HO, as well as the mammalian isoforms HO-1, and HO-2. Heme oxygenases play key roles in heme homeostasis, oxidative stress response, photosynthetic pigment formation in cyanobacteria, cellular signaling in mammals, and iron acquisition from host heme by bacterial pathogens. Length = 203

>gnl|CDD|201611 pfam01126, Heme_oxygenase, Heme oxygenase

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 6/108 (5%)

Query: 145 SMDAFVKYLVDSQLVFNTIERIVDDSND---VAYAYFRKTGLERSEGISRDLE-WFSEQG 200
             +A+ K L +   V++ +E  ++ + D    A  YF +  L R   + RDL   +    
Sbjct: 33  DKEAYAKLLANLYFVYSALEEELERNRDSPVAAPIYFPE--LNRKAALERDLAYLYGADW 90

Query: 201 IIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIER 248
               + S     Y   + E+  +S  L ++H Y  Y   ++GGQ++++
Sbjct: 91  RADIQDSPATQEYVPRIREIGNESPELLVAHAYTRYLGDLSGGQLLKK 138

Length = 204

>gnl|CDD|227685 COG5398, COG5398, Heme oxygenase [Inorganic ion transport and metabolism]

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 10/108 (9%)

Query: 147 DAFVKYLVDSQLVFNTIE---RIVDDSNDVAYAYFRKTGLERSEGISRDLEWFSE---QG 200
           ++F K L +   V++ +E   +I  D+  ++  YF +  L R   + +DL ++     + 
Sbjct: 35  ESFRKLLANLYFVYSALEAATQIHKDNPILSSIYFPE--LNRKATLEKDLLYYYGNNWRE 92

Query: 201 IIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIER 248
            I P P+T  ++Y   +  +A  +  L ++H Y  Y   ++GGQ++++
Sbjct: 93  NIQPSPAT--IAYVDRVRYIAATAPELLIAHNYTRYLGDLSGGQILKK 138

Length = 238

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	280
CHL00168	238	pbsA heme oxygenase; Provisional	100.0
COG5398	238	Heme oxygenase [Inorganic ion transport and metabo	100.0
KOG4480	283	consensus Heme oxygenase [Inorganic ion transport	99.97
PF01126	205	Heme_oxygenase: Heme oxygenase; InterPro: IPR01605	99.95
cd00232	203	HemeO Heme oxygenase catalyzes the rate limiting s	99.95
KOG4480	283	consensus Heme oxygenase [Inorganic ion transport	99.45
COG3230	196	HemO Heme oxygenase [Inorganic ion transport and m	90.81

>CHL00168 pbsA heme oxygenase; Provisional

Probab=100.00  E-value=2.1e-40  Score=301.38  Aligned_cols=140  Identities=19%  Similarity=0.336  Sum_probs=131.9

Q ss_pred             CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccccCCCccchHHHHHHHHHHhhcC-CCCCCCCchHHHHHHH
Q 023558          139 GETWKPSMDAFVKYLVDSQLVFNTIERIVDDSND-VAYAYFRKTGLERSEGISRDLEWFSEQG-IIIPEPSTPGVSYAKY  216 (280)
Q Consensus       139 ~~~w~~s~e~Y~~lL~~ly~VY~ALE~av~~~~d-p~~a~f~~peL~Rs~aLekDL~~f~G~~-~~~p~P~pat~~Yv~r  216 (280)
                      +-++..++++|+++|.++|+||++||++++++.+ |.+++|++|+|.|+++|++||+||+|++ ++.+.|+|+++.||+|
T Consensus        29 ll~g~~~~~~Y~~ll~~ly~vY~aLE~~l~~~~~~~~~~~~~~peL~R~~aLe~DL~~l~G~~w~~~~~p~pa~~~Yv~r  108 (238)
T CHL00168         29 FLGGVIDKKSYRKLVANLYFVYSAIEEEIEKNKEHPLIKPIYFQELNRKESLEKDLNYYYGDDWKSIIEPSPATKIYVDR  108 (238)
T ss_pred             HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccchhhhhhHHHHHHHHHHcCCCccccCCCChHHHHHHHH
Confidence            3468999999999999999999999999999986 6669999999999999999999999998 5677899999999999


Q ss_pred             HHHHHhcCcchhHhHHHHHHhhhcccchhhhcc--------------------------------------CCCHHHHHH
Q 023558          217 LEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ--------------------------------------HWTRDEKNK  258 (280)
Q Consensus       217 L~ela~~~P~lLVAHaYtRYLGDLSGGQiI~r~--------------------------------------~Ldeeek~~  258 (280)
                      |+++++++|.+|+||+||||||||||||||+++                                      +||++++++
T Consensus       109 I~~~~~~~P~~LvAH~YvrYLGdlsGGQiI~k~l~r~~gl~~~~G~~Fy~F~~i~~~~~fk~~yr~~Ld~l~l~e~e~~~  188 (238)
T CHL00168        109 IHKISAKKPELLIAHAYTRYLGDLSGGQILKKIAQRAMNLSDSGGLAFYDFDNIEDDQEFKQIYKAALDNLPLSDDQIQN  188 (238)
T ss_pred             HHHHhhcChHHHHHHHHHHHHHhccccHHHHHHHHHHhCCCCCcCccccCCCCcCcHHHHHHHHHHHHhcCCCCHHHHHH
Confidence            999999999999999999999999999999996                                      899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q 023558          259 SLKEAAKSFKFLGQIVRLII  278 (280)
Q Consensus       259 iIeEA~~AF~lN~~Ifr~I~  278 (280)
                      ||+||+.||++|++||+.+-
T Consensus       189 iI~EA~~AF~lN~~vf~eL~  208 (238)
T CHL00168        189 IIAEANIAFNLNMKMFQELN  208 (238)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998763

>COG5398 Heme oxygenase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=1.5e-36  Score=273.03  Aligned_cols=141  Identities=19%  Similarity=0.314  Sum_probs=134.9

Q ss_pred             CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccccCCCccchHHHHHHHHHHhhcC-CCCCCCCchHHHHH
Q 023558          137 NDGETWKPSMDAFVKYLVDSQLVFNTIERIVDDSND-VAYAYFRKTGLERSEGISRDLEWFSEQG-IIIPEPSTPGVSYA  214 (280)
Q Consensus       137 ~~~~~w~~s~e~Y~~lL~~ly~VY~ALE~av~~~~d-p~~a~f~~peL~Rs~aLekDL~~f~G~~-~~~p~P~pat~~Yv  214 (280)
                      +-+-++.++++.|.+++.++|+||++||++++.++| |.++.+++|+|+|.+.|++||.+++|.+ ++.+.|+|+|+.||
T Consensus        25 kcfLkg~V~~e~f~kl~~n~yf~ysaleaa~~~~~d~~~l~~i~fp~lnr~~tle~dl~~yyg~nwre~I~~sp~t~~yv  104 (238)
T COG5398          25 KCFLKGVVERESFRKLLANLYFVYSALEAATQIHKDNPILSSIYFPELNRKATLEKDLLYYYGNNWRENIQPSPATIAYV  104 (238)
T ss_pred             HHHHcCcccHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhccchhhhhHHHhhcCHHHHhcccHHHhcCcChhHHHHH
Confidence            347789999999999999999999999999999998 7789999999999999999999999977 67889999999999


Q ss_pred             HHHHHHHhcCcchhHhHHHHHHhhhcccchhhhcc-------------------------------------CCCHHHHH
Q 023558          215 KYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ-------------------------------------HWTRDEKN  257 (280)
Q Consensus       215 ~rL~ela~~~P~lLVAHaYtRYLGDLSGGQiI~r~-------------------------------------~Ldeeek~  257 (280)
                      .||++++...|.+||||+||||||||||||||+++                                     +||+++++
T Consensus       105 ~rv~~iaa~ap~lLIah~ytRyLGdlsggq~l~ki~q~~~~L~~~gtaFy~F~dl~dek~fK~~YR~~ld~l~ldeAt~~  184 (238)
T COG5398         105 DRVRYIAATAPELLIAHNYTRYLGDLSGGQILKKIAQSALELSEGGTAFYEFEDLGDEKAFKDEYRQNLDSLELDEATKL  184 (238)
T ss_pred             HHHHHHHhcCcchhHHHHHHHHHhcCCCcHHHHHHHHHHhccccccceeeeHhhcchhhhHHHHHHHHhhcccccHHHHH
Confidence            99999999999999999999999999999999998                                     89999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q 023558          258 KSLKEAAKSFKFLGQIVRLI  277 (280)
Q Consensus       258 ~iIeEA~~AF~lN~~Ifr~I  277 (280)
                      +||+||+.||++|++||..|
T Consensus       185 rIvdeAn~aF~~N~~~~~eL  204 (238)
T COG5398         185 RIVDEANDAFDFNMQMFQEL  204 (238)
T ss_pred             HHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999876

>KOG4480 consensus Heme oxygenase [Inorganic ion transport and metabolism]

Probab=99.97  E-value=8.1e-32  Score=249.80  Aligned_cols=188  Identities=41%  Similarity=0.671  Sum_probs=171.2

Q ss_pred             hhcccccCCCCccchHHHHHHHHhHhcccCCCCCCCCCCCCCCCCCCCCCcchhhhhhhccCCCCCccccCHHH---HHH
Q 023558           75 RVRYRREYPGESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDA---FVK  151 (280)
Q Consensus        75 ~~r~~~~~pge~kg~~eEmRfvaMrl~~~~q~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~w~~s~e~---Y~~  151 (280)
                      .-++.++||||..||+||||||+|+||++++.+++..                 .++ +...-.+.+|..+.++   |.+
T Consensus        56 ~~~~~~~y~~e~~~~~E~~~F~~~~f~~~~el~e~~a-----------------~~~-d~~~~~~~~W~e~ie~~pa~~k  117 (283)
T KOG4480|consen   56 LYFWYKAYPGETEGFKEEMRFVAMRFPSTEELHEKEA-----------------LEQ-DPEEFFGENWEETIEGEPAYQK  117 (283)
T ss_pred             HHHHHHhCcchhhhhhHHHhhHhhhcCCHHHHhHHhh-----------------hhc-ChhhhccccccccccCCHHHHH
Confidence            4466889999999999999999999999988765210                 111 2233578999999999   999


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCcccccccCCCccchHHHHHHHHHHhhcCCCCCCCCchHHHHHHHHHHHHhcCcchhHhH
Q 023558          152 YLVDSQLVFNTIERIVDDSNDVAYAYFRKTGLERSEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSH  231 (280)
Q Consensus       152 lL~~ly~VY~ALE~av~~~~dp~~a~f~~peL~Rs~aLekDL~~f~G~~~~~p~P~pat~~Yv~rL~ela~~~P~lLVAH  231 (280)
                      ||++++.||+++|.++.+++-+.|..+.+.||+|.+.++.||.|+..|+..+|.|.+++.+|..++.+.++.+|..+|||
T Consensus       118 yl~~~~~v~~t~e~ll~~s~~~~Y~g~~s~GLek~~q~~~dl~w~~~q~~~~pe~~~a~k~~~~y~k~~~E~~pq~~I~~  197 (283)
T KOG4480|consen  118 YLVDSKLVADTEEELLVASAYTRYAGLLSGGLEKAEQKELDLPWTGEQFYTFPELANAGKTYQKYLKNNLELDPQRFICE  197 (283)
T ss_pred             HHHHHHHHHHhhhHHHHHhhHHHHHHhhccHHHHHHHHHhhcchhhhhccccCCCCcHHHHHHHHHHHhhccChhHHHHH
Confidence            99999999999999999999899999999999999999999999988889999999999999999999999999999999


Q ss_pred             HHHHHhhhcccchhhhcc------------------------------------CCCHHHHHHHHHHHHHHHHHHHHHHH
Q 023558          232 FYNIYFSHVAGGQVIERQ------------------------------------HWTRDEKNKSLKEAAKSFKFLGQIVR  275 (280)
Q Consensus       232 aYtRYLGDLSGGQiI~r~------------------------------------~Ldeeek~~iIeEA~~AF~lN~~Ifr  275 (280)
                      +|+.|+.+..|||+|+++                                    .|+++++++||.|..++|.+-+.|++
T Consensus       198 ~~~iyf~~~~~f~~~~~~v~~~ile~~~~ef~~~~~~~~~~~~~v~ekln~~~~~~~r~~~~~~L~~~~l~fif~~~iv~  277 (283)
T KOG4480|consen  198 FYNIYFAHIAGFQMLGRKVAEEILENKELEFDGWDGRFSELLQNVREKLNKEGEAWTREEKNACLLETSLAFIFVGEIVR  277 (283)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhhHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999988                                    89999999999999999999999999


Q ss_pred             HHHhC
Q 023558          276 LIILL  280 (280)
Q Consensus       276 ~I~~~  280 (280)
                      +|++.
T Consensus       278 ~~L~a  282 (283)
T KOG4480|consen  278 LILSA  282 (283)
T ss_pred             HHHhc
Confidence            99873

>PF01126 Heme_oxygenase: Heme oxygenase; InterPro: IPR016053 Haem oxygenase (1

Probab=99.95  E-value=2e-28  Score=211.77  Aligned_cols=137  Identities=28%  Similarity=0.352  Sum_probs=123.6

Q ss_pred             CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccccCCCccchHHHHHHHHHHhhcC-CCCCCCCchHHHHHHHH
Q 023558          140 ETWKPSMDAFVKYLVDSQLVFNTIERIVDDSND-VAYAYFRKTGLERSEGISRDLEWFSEQG-IIIPEPSTPGVSYAKYL  217 (280)
Q Consensus       140 ~~w~~s~e~Y~~lL~~ly~VY~ALE~av~~~~d-p~~a~f~~peL~Rs~aLekDL~~f~G~~-~~~p~P~pat~~Yv~rL  217 (280)
                      .++.+|++.|+++|.++|.||.+||.+++.+.+ +.++.+++|+|.|++.|++||++|.|++ .+.+.|++++..|+.+|
T Consensus        28 ~~~~~~~~~Y~~~L~~~~~~y~~lE~~l~~~~~~~~~~~~~~~~l~R~~~L~~DL~~l~~~~~~~~~~~~~a~~~~~~~i  107 (205)
T PF01126_consen   28 FAGDLSRDDYARFLQAFYHVYRALEAALDRNRDDPALAPLYFPELRRSAALEADLAALGGPDWRDDIEPSPATQAYVPHI  107 (205)
T ss_dssp             HTTSSTHHHHHHHHHHHHHHHHHHHHHHHHTTTSTTTGGGS-GHHHTHHHHHHHHHHHHCTTHHHHCHHHHHHHHHHHHH
T ss_pred             HhCCCcHHHHHHHHHHHHHHHHHHHHHHhhcccCCccccccCcchhHHHHHHHHHHHhhCCCcccccCCChhHHHHHHHH
Confidence            467899999999999999999999999999855 7788999999999999999999999965 45667788999999999


Q ss_pred             HHHHhcCcchhHhHHHHHHhhhcccchhhhcc---------------------------------------CCCHHHHHH
Q 023558          218 EELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ---------------------------------------HWTRDEKNK  258 (280)
Q Consensus       218 ~ela~~~P~lLVAHaYtRYLGDLSGGQiI~r~---------------------------------------~Ldeeek~~  258 (280)
                      ++++..+|..+++|+||+|+|+|+|||||+++                                       .+|++++++
T Consensus       108 ~~~~~~~p~~~lg~~YV~egs~LgGg~ii~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~w~~f~~~l~~~~l~~~~~~~  187 (205)
T PF01126_consen  108 RELAESSPALLLGHAYVLEGSTLGGGQIIRRLLARHLGLPEGFGGLSFFSFGGIEDTGALWRAFRAALDAAALTEEERDE  187 (205)
T ss_dssp             HHHHHHSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHT-BTTBCSGGGGH-TTSSSHHHHHHHHHHHHHHS---HHHHHH
T ss_pred             HHHHccCHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCCCCCcccccccCCCCcccHHHHHHHHHHHHhcCCCCHHHHHH
Confidence            99999999999999999999999999999995                                       689999999


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 023558          259 SLKEAAKSFKFLGQIVRL  276 (280)
Q Consensus       259 iIeEA~~AF~lN~~Ifr~  276 (280)
                      ||+||+.+|++|++||+.
T Consensus       188 ii~~A~~~F~~~~~~~~~  205 (205)
T PF01126_consen  188 IIEEAKAAFRLNIAWFRE  205 (205)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcC
Confidence            999999999999999974

14.99.3 from EC) (HO) [] is the microsomal enzyme that, in animals, carries out the oxidation of haem, it cleaves the haem ring at the alpha-methene bridge to form biliverdin and carbon monoxide []. Biliverdin is subsequently converted to bilirubin by biliverdin reductase. In mammals there are three isozymes of haem oxygenase: HO-1 to HO-3. The first two isozymes differ in their tissue expression and their inducibility: HO-1 is highly inducible by its substrate haem and by various non-haem substances, while HO-2 is non-inducible. It has been suggested [] that HO-2 could be implicated in the production of carbon monoxide in the brain where it is said to act as a neurotransmitter. In the genome of the chloroplast of red algae as well as in cyanobacteria, there is a haem oxygenase (gene pbsA) that is the key enzyme in the synthesis of the chromophoric part of the photosynthetic antennae []. A haem oxygenase is also present in the bacteria Corynebacterium diphtheriae (gene hmuO), where it is involved in the acquisition of iron from the host haem []. There is, in the central section of these enzymes, a well-conserved region centred on a histidine residue.; GO: 0004392 heme oxygenase (decyclizing) activity, 0006788 heme oxidation, 0055114 oxidation-reduction process; PDB: 1J77_A 1P3U_A 1P3V_A 1P3T_A 1WNW_B 1WNX_B 1IW1_B 1WNV_C 1V8X_A 1WZG_B ....

>cd00232 HemeO Heme oxygenase catalyzes the rate limiting step in the degradation of heme to bilirubin, it is essential for recycling of iron from heme

Probab=99.95  E-value=4.6e-27  Score=202.96  Aligned_cols=163  Identities=25%  Similarity=0.406  Sum_probs=140.4

Q ss_pred             chHHHHHHHHhHhcccCCCCCCCCCCCCCCCCCCCCCcchhhhhhhccCCCCCccccCHHHHHHHHHHHHHHHHHHHHHH
Q 023558           88 GITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIERIV  167 (280)
Q Consensus        88 g~~eEmRfvaMrl~~~~q~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~w~~s~e~Y~~lL~~ly~VY~ALE~av  167 (280)
                      +|.+.||+.-+.+|.+-.+..                          ..+...++.++.+.|+++|.++|.+|.+||.++
T Consensus         1 ~~~~~Lr~~T~~~H~~~e~~~--------------------------~~~~l~~~~~s~~~Y~~~L~~~~~~~~~lE~~l   54 (203)
T cd00232           1 SLSEELRAATRQLHEEAENLV--------------------------FMKDLLKGFLSREGYARFLANLYLVYRALEALL   54 (203)
T ss_pred             CHHHHHHHHHHHHHHHHHchH--------------------------HHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            578899999999997654221                          112245789999999999999999999999999


Q ss_pred             HhcCC-cccccccCCCccchHHHHHHHHHHhhcCCC-CCCCCchHHHHHHHHHHHHhcCcchhHhHHHHHHhhhcccchh
Q 023558          168 DDSND-VAYAYFRKTGLERSEGISRDLEWFSEQGII-IPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQV  245 (280)
Q Consensus       168 ~~~~d-p~~a~f~~peL~Rs~aLekDL~~f~G~~~~-~p~P~pat~~Yv~rL~ela~~~P~lLVAHaYtRYLGDLSGGQi  245 (280)
                      +++.+ +..+.+..+++.|++.|++||++|.|.... ...|.+++ .|+++|...+..+|..+++|+||+|+|+|||||+
T Consensus        55 ~~~~~~~~~~~~~~~~~~r~~~L~~DL~~lg~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~lg~~YV~egs~l~GG~~  133 (203)
T cd00232          55 EASKDNPYLAPLYLPELERAAALEKDLAYLGGSDWRVREPPLPAA-AYAARLREIAEENPALLLGHAYVRYGADLSGGQV  133 (203)
T ss_pred             HHccCCcccccccCccccchHHHHHHHHHHhCCCccccCCCChHH-HHHHHHHHHHhcCHHHHHHHHHHHHHHHhcccHH
Confidence            99976 444568899999999999999999887633 33445555 9999999999999999999999999999999999


Q ss_pred             hhcc-------------------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023558          246 IERQ-------------------------------------HWTRDEKNKSLKEAAKSFKFLGQIVRLI  277 (280)
Q Consensus       246 I~r~-------------------------------------~Ldeeek~~iIeEA~~AF~lN~~Ifr~I  277 (280)
                      |+++                                     .+|++++++||+||+.+|++|.+||+.|
T Consensus       134 i~~~l~~~~~~~~~~~~f~~~~g~~~~~~~w~~f~~~l~~~~~~~~~~~~~i~~A~~~F~~~~~~~~~~  202 (203)
T cd00232         134 LAKIAQRALLLEGKGLAFYAFHGIADRGLFKREFREALDALPLDEEERQRVVAEARAAFRLNGQVFREL  202 (203)
T ss_pred             HHHHHHHHhCCCCccCccccCCCcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9877                                     7899999999999999999999999976

Heme is used as a substrate and cofactor for its own degradation to biliverdin, iron, and carbon monoxide. This family includes bacterial HO, as well as the mammalian isoforms HO-1, and HO-2. Heme oxygenases play key roles in heme homeostasis, oxidative stress response, photosynthetic pigment formation in cyanobacteria, cellular signaling in mammals, and iron acquisition from host heme by bacterial pathogens.

>KOG4480 consensus Heme oxygenase [Inorganic ion transport and metabolism]

Probab=99.45  E-value=2e-13  Score=127.58  Aligned_cols=140  Identities=12%  Similarity=0.069  Sum_probs=116.2

Q ss_pred             CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccccCC---CccchHHHHHHHHHHhhcCCCCCCC-CchHHHH
Q 023558          139 GETWKPSMDAFVKYLVDSQLVFNTIERIVDDSND-VAYAYFRKT---GLERSEGISRDLEWFSEQGIIIPEP-STPGVSY  213 (280)
Q Consensus       139 ~~~w~~s~e~Y~~lL~~ly~VY~ALE~av~~~~d-p~~a~f~~p---eL~Rs~aLekDL~~f~G~~~~~p~P-~pat~~Y  213 (280)
                      +.+...+.+.+..-...+++.|.+++.......+ +.+.+.++|   +|+|.+++++|+++|+|.+|....+ .|+.+.|
T Consensus        39 ~~~~n~t~~l~~~~t~a~~~~~~~y~~e~~~~~E~~~F~~~~f~~~~el~e~~a~~~d~~~~~~~~W~e~ie~~pa~~ky  118 (283)
T KOG4480|consen   39 LLKGNVTPELVQLSTAALYFWYKAYPGETEGFKEEMRFVAMRFPSTEELHEKEALEQDPEEFFGENWEETIEGEPAYQKY  118 (283)
T ss_pred             HhhcCCchHHHHHHHHHHHHHHHhCcchhhhhhHHHhhHhhhcCCHHHHhHHhhhhcChhhhccccccccccCCHHHHHH
Confidence            5678899999998899999999999998888877 666666666   8999999999999999999654444 4677899


Q ss_pred             HHHHHHHHhcCcchhHhHHHHHHhhhcccc-----hhhhccCCCH-------------------------HHHHHHHHHH
Q 023558          214 AKYLEELAEKSAPLFLSHFYNIYFSHVAGG-----QVIERQHWTR-------------------------DEKNKSLKEA  263 (280)
Q Consensus       214 v~rL~ela~~~P~lLVAHaYtRYLGDLSGG-----QiI~r~~Lde-------------------------eek~~iIeEA  263 (280)
                      +.|++.++.+.|.+|++|+|+||+|++|||     |+...++|+-                         ..-+++|.|+
T Consensus       119 l~~~~~v~~t~e~ll~~s~~~~Y~g~~s~GLek~~q~~~dl~w~~~q~~~~pe~~~a~k~~~~y~k~~~E~~pq~~I~~~  198 (283)
T KOG4480|consen  119 LVDSKLVADTEEELLVASAYTRYAGLLSGGLEKAEQKELDLPWTGEQFYTFPELANAGKTYQKYLKNNLELDPQRFICEF  198 (283)
T ss_pred             HHHHHHHHHhhhHHHHHhhHHHHHHhhccHHHHHHHHHhhcchhhhhccccCCCCcHHHHHHHHHHHhhccChhHHHHHH
Confidence            999999999999999999999999999999     3333331111                         1228899999


Q ss_pred             HHHHHHHHHHHHHHH
Q 023558          264 AKSFKFLGQIVRLII  278 (280)
Q Consensus       264 ~~AF~lN~~Ifr~I~  278 (280)
                      ..+|-.|+++|+-|-
T Consensus       199 ~~iyf~~~~~f~~~~  213 (283)
T KOG4480|consen  199 YNIYFAHIAGFQMLG  213 (283)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999997653

>COG3230 HemO Heme oxygenase [Inorganic ion transport and metabolism]

Probab=90.81  E-value=4.9  Score=36.77  Aligned_cols=136  Identities=15%  Similarity=0.155  Sum_probs=80.7

Q ss_pred             CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCC-ccchHHHHHHHHHHhhcC---CCCC---CCCc-
Q 023558          137 NDGETWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYAYFRKTG-LERSEGISRDLEWFSEQG---IIIP---EPST-  208 (280)
Q Consensus       137 ~~~~~w~~s~e~Y~~lL~~ly~VY~ALE~av~~~~dp~~a~f~~pe-L~Rs~aLekDL~~f~G~~---~~~p---~P~p-  208 (280)
                      -+..+=.+|++.|++++.-.|.+-..||.+++...=|  +.|..++ +.|...|+.||.-+ |..   .+.|   .|.. 
T Consensus        30 v~~~~pf~sr~nyl~f~~~q~~f~~~Le~~~r~~~l~--~~lp~l~~r~r~~~l~~DLadl-G~~~~~~d~p~~~~~~t~  106 (196)
T COG3230          30 VPSVQPFLSRRNYLKFLKRQYLFHKPLEHILRDAELP--KALPELEYRARYDALEQDLADL-GEEPPKFDKPRCEPPLTL  106 (196)
T ss_pred             ccccCccccHHHHHHHHHHHHHHhhhHHHHHccccch--hhcccHHHHHHHHHHHHHHHHh-CCCCCccccccccCCchh
Confidence            3445557899999999999999999999999763222  3344444 77899999999987 432   1222   1111 


Q ss_pred             hHH----HHHHHHHHHHhc------CcchhHhHHHHHHhhhcccchhhhcc---------CCCHHHHHHHHHHHHHHHHH
Q 023558          209 PGV----SYAKYLEELAEK------SAPLFLSHFYNIYFSHVAGGQVIERQ---------HWTRDEKNKSLKEAAKSFKF  269 (280)
Q Consensus       209 at~----~Yv~rL~ela~~------~P~lLVAHaYtRYLGDLSGGQiI~r~---------~Ldeeek~~iIeEA~~AF~l  269 (280)
                      +..    .||.-=..++..      .+-.+.--+=.|||+--=+|+-.+-+         .+++|+..+.++=|..+|..
T Consensus       107 ~aea~GwlYV~EGstLGaAfL~K~aa~L~l~~e~garhLag~~~grG~~WrsF~e~L~~~~l~~E~e~~av~gA~~aF~~  186 (196)
T COG3230         107 AAEAFGWLYVAEGSTLGAAFLFKHAAKLGLNPEFGARHLAGYGDGRGKRWRSFVEHLDAINLTPEAEAEAVAGARAAFAA  186 (196)
T ss_pred             HHHhhhhhhhccccchHHHHHHHHHHHhcCCcccchHhhcCCCCCCCccHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Confidence            111    344321111110      00111111223444444344322222         79999999999999999987


Q ss_pred             HHHHHH
Q 023558          270 LGQIVR  275 (280)
Q Consensus       270 N~~Ifr  275 (280)
                      =..+++
T Consensus       187 fr~~l~  192 (196)
T COG3230         187 FRRVLQ  192 (196)
T ss_pred             HHHHHH
Confidence            665544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	280
1wzd_A	215	Heme oxygenase; electron-transfer, artificial meta	1e-18
2q32_A	264	Heme oxygenase 2, HO-2; structural genomics medica	1e-18
1wov_A	250	Heme oxygenase 2; HOMO dimer, oxidoreductase; HET:	1e-17
1we1_A	240	Heme oxygenase 1; oxidoreductase; HET: HEM; 2.50A	2e-16
1n45_A	233	Heme oxygenase 1, HO-1; alpha helices, heme-bindin	2e-16
1j02_A	267	Heme oxygenase 1; alpha helix, O2-analog bound for	9e-16
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-07

>1wzd_A Heme oxygenase; electron-transfer, artificial metalloprotein; HET: YOK; 1.35A {Corynebacterium diphtheriae} SCOP: a.132.1.1 PDB: 1iw1_A* 1v8x_A* 1iw0_A* 1wzf_A* 1wzg_A* 2z68_A* 3i8r_A* 3moo_A* 1wnw_A* 1wnx_A* 1wnv_A* Length = 215

 Score = 81.3 bits (200), Expect = 1e-18
 Identities = 32/175 (18%), Positives = 58/175 (33%), Gaps = 41/175 (23%)

Query: 142 WKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAY-AYFRKTGLERSEGISRDLEWFSEQG 200
            +  +  F +    + L +  +E+ VD      +        L R+E ++RDL+  +   
Sbjct: 35  GRLGVAEFTRLQEQAWLFYTALEQAVDAVRASGFAESLLDPALNRAEVLARDLDKLNGSS 94

Query: 201 --IIIPEPSTPGVSYAKYLEELAEKSAP-LFLSHFYNIYFSHVAGGQVIERQ-------- 249
                   S   + Y   LEE+ +       ++H Y  Y   ++GGQVI R         
Sbjct: 95  EWRSRITASPAVIDYVNRLEEIRDNVDGPALVAHHYVRYLGDLSGGQVIARMMQRHYGVD 154

Query: 250 -----------------------------HWTRDEKNKSLKEAAKSFKFLGQIVR 275
                                          + +++   LKEA  +F F  Q+  
Sbjct: 155 PEALGFYHFEGIAKLKVYKDEYREKLNNLELSDEQREHLLKEATDAFVFNHQVFA 209

>2q32_A Heme oxygenase 2, HO-2; structural genomics medical relevance, structural genomics community request, protein structure in PSI; HET: OXN; 2.40A {Homo sapiens} PDB: 2qpp_A* 2rgz_A* Length = 264

 Score = 82.2 bits (202), Expect = 1e-18
 Identities = 25/176 (14%), Positives = 57/176 (32%), Gaps = 42/176 (23%)

Query: 142 WKPSMDAFVKYLVDSQLVFNTIERIVDDSND--VAYAYFRKTGLERSEGISRDLEWFSEQ 199
                + F          ++ +E  ++ + D       +    L R E +++D+E+F  +
Sbjct: 60  GNIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGE 119

Query: 200 GI-IIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ--------- 249
                 +       Y + +  + +    L ++H Y  Y   ++GGQV+++          
Sbjct: 120 NWEEQVQAPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPS 179

Query: 250 ------------------------------HWTRDEKNKSLKEAAKSFKFLGQIVR 275
                                               K + ++EA K+F++  QI  
Sbjct: 180 TGEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFN 235

>1wov_A Heme oxygenase 2; HOMO dimer, oxidoreductase; HET: HEM; 1.75A {Synechocystis SP} SCOP: a.132.1.1 PDB: 1wow_A* 1wox_A* Length = 250

 Score = 79.5 bits (195), Expect = 1e-17
 Identities = 27/194 (13%), Positives = 60/194 (30%), Gaps = 46/194 (23%)

Query: 125 DDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIERIVDDSNDV-AYAYFRKTGL 183
              E+   +K    G       + F + L +   +++ +E  +    D    +      L
Sbjct: 17  TLAENTAYMKCFLKG---IVEREPFRQLLANLYYLYSALEAALRQHRDNEIISAIYFPEL 73

Query: 184 ERSEGISRDLEWFSEQG-IIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAG 242
            R++ ++ DL ++       I +P+     Y   L+ +A     L ++H Y  Y   ++G
Sbjct: 74  NRTDKLAEDLTYYYGPNWQQIIQPTPCAKIYVDRLKTIAASEPELLIAHCYTRYLGDLSG 133

Query: 243 GQVI-----------------------------------------ERQHWTRDEKNKSLK 261
           GQ +                                                   N+ ++
Sbjct: 134 GQSLKNIIRSALQLPEGEGTAMYEFDSLPTPGDRRQFKEIYRDVLNSLPLDEATINRIVE 193

Query: 262 EAAKSFKFLGQIVR 275
           EA  +F    +++ 
Sbjct: 194 EANYAFSLNREVMH 207

>1we1_A Heme oxygenase 1; oxidoreductase; HET: HEM; 2.50A {Synechocystis SP} SCOP: a.132.1.1 Length = 240

 Score = 75.7 bits (185), Expect = 2e-16
 Identities = 22/173 (12%), Positives = 57/173 (32%), Gaps = 39/173 (22%)

Query: 142 WKPSMDAFVKYLVDSQLVFNTIERIVDDSNDV-AYAYFRKTGLERSEGISRDLEWFSEQG 200
                +++ K + +   V++ +E  +    D    ++     L R + + +DL+++    
Sbjct: 32  GVVEKNSYRKLVGNLYFVYSAMEEEMAKFKDHPILSHIYFPELNRKQSLEQDLQFYYGSN 91

Query: 201 I-IIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVI------------- 246
                + S  G +Y   + ++A  +  L ++H Y  Y   ++GGQ++             
Sbjct: 92  WRQEVKISAAGQAYVDRVRQVAATAPELLVAHSYTRYLGDLSGGQILKKIAQNAMNLHDG 151

Query: 247 ------------------------ERQHWTRDEKNKSLKEAAKSFKFLGQIVR 275
                                         +    + + EA  +F    ++  
Sbjct: 152 GTAFYEFADIDDEKAFKNTYRQAMNDLPIDQATAERIVDEANDAFAMNMKMFN 204

>1n45_A Heme oxygenase 1, HO-1; alpha helices, heme-binding site, oxidoreductase; HET: HEM; 1.50A {Homo sapiens} SCOP: a.132.1.1 PDB: 1n3u_A* 1ozr_A* 1ozw_A* 1s13_A* 1s8c_A* 1t5p_A* 1twn_A* 1twr_A* 3czy_A* 3hok_A* 3k4f_A* 3tgm_A* 1xjz_A* 1xk3_A* 1xk2_A* 1ozl_A* 1oyk_A* 1oze_A* 1oyl_A* 1xk0_A* ... Length = 233

 Score = 75.6 bits (185), Expect = 2e-16
 Identities = 26/176 (14%), Positives = 57/176 (32%), Gaps = 42/176 (23%)

Query: 142 WKPSMDAFVKYLVDSQLVFNTIERIVDDSND--VAYAYFRKTGLERSEGISRDLE-WFSE 198
            + + D F   +     ++  +E  ++ + +  V    +    L R   + +DL  W+  
Sbjct: 40  GQVTRDGFKLVMASLYHIYVALEEEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGP 99

Query: 199 QGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ--------- 249
           +   +   +     Y K L E+      L ++H Y  Y   ++GGQV+++          
Sbjct: 100 RWQEVIPYTPAMQRYVKRLHEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQKALDLPS 159

Query: 250 ------------------------------HWTRDEKNKSLKEAAKSFKFLGQIVR 275
                                           T   + + ++EA  +F    Q+  
Sbjct: 160 SGEGLAFFTFPNIASATKFKQLYRSRMNSLEMTPAVRQRVIEEAKTAFLLNIQLFE 215

>1j02_A Heme oxygenase 1; alpha helix, O2-analog bound form, oxidoreductase; HET: HEM; 1.70A {Rattus norvegicus} SCOP: a.132.1.1 PDB: 1irm_C 1dve_A* 1ix3_A* 1ivj_A* 1ix4_A* 1j2c_A* 1ubb_A* 1ulx_A* 1vgi_A* 2dy5_A* 2e7e_A* 2zvu_A* 1dvg_A* 3i9t_A* 3i9u_A* Length = 267

 Score = 74.6 bits (182), Expect = 9e-16
 Identities = 24/176 (13%), Positives = 55/176 (31%), Gaps = 42/176 (23%)

Query: 142 WKPSMDAFVKYLVDSQLVFNTIERIVDDSND--VAYAYFRKTGLERSEGISRDLEWFSEQ 199
            + S + F   +     ++  +E  ++ +    V    +    L R   + +D+ ++   
Sbjct: 40  GQVSREGFKLVMASLYHIYTALEEEIERNKQNPVYAPLYFPEELHRRAALEQDMAFWYGP 99

Query: 200 GI-IIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ--------- 249
                   +     Y K L E+      L ++H Y  Y   ++GGQV+++          
Sbjct: 100 HWQEAIPYTPATQHYVKRLHEVGGTHPELLVAHAYTRYLGDLSGGQVLKKIAQKAMALPS 159

Query: 250 ------------------------------HWTRDEKNKSLKEAAKSFKFLGQIVR 275
                                           T + K++  +EA  +F    ++  
Sbjct: 160 SGEGLAFFTFPSIDNPTKFKQLYRARMNTLEMTPEVKHRVTEEAKTAFLLNIELFE 215

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 5e-07
 Identities = 24/175 (13%), Positives = 55/175 (31%), Gaps = 48/175 (27%)

Query: 113 HNSNSDCE----DSSNDDVEH--EQEVKQDNDGETWKPSMDAFVKYLVDS-QLVFNT--I 163
           H+ + D E         D+    E     + D            K + D  + + +   I
Sbjct: 3   HHHHMDFETGEHQYQYKDILSVFEDAFVDNFD-----------CKDVQDMPKSILSKEEI 51

Query: 164 ERIVDDSNDVAYAYF--------RKTGLER--SEGISRDLEWFSEQGIIIPEPSTPGVSY 213
           + I+   + V+            ++  +++   E +  + ++      I  E   P +  
Sbjct: 52  DHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSP--IKTEQRQPSMMT 109

Query: 214 AKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQHWTRDEKNKSLKEAAKSFK 268
             Y+E+             YN         QV  + + +R +    L++A    +
Sbjct: 110 RMYIEQR---------DRLYN-------DNQVFAKYNVSRLQPYLKLRQALLELR 148

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	280
1we1_A	240	Heme oxygenase 1; oxidoreductase; HET: HEM; 2.50A	100.0
1n45_A	233	Heme oxygenase 1, HO-1; alpha helices, heme-bindin	100.0
1j02_A	267	Heme oxygenase 1; alpha helix, O2-analog bound for	100.0
2q32_A	264	Heme oxygenase 2, HO-2; structural genomics medica	100.0
1wzd_A	215	Heme oxygenase; electron-transfer, artificial meta	100.0
1wov_A	250	Heme oxygenase 2; HOMO dimer, oxidoreductase; HET:	100.0
1sk7_A	198	Hypothetical protein PA-HO; heme oxygenase, heme d	99.83
1j77_A	209	HEMO, heme oxygenase; proximal histidine, distal h	99.82
3dde_A	239	TENA/THI-4 protein, domain of unknown function WI	99.4

>1we1_A Heme oxygenase 1; oxidoreductase; HET: HEM; 2.50A {Synechocystis SP} SCOP: a.132.1.1

Probab=100.00  E-value=1e-36  Score=273.23  Aligned_cols=166  Identities=14%  Similarity=0.234  Sum_probs=148.0

Q ss_pred             cchHHHHHHHHhHhcccCCCCCCCCCCCCCCCCCCCCCcchhhhhhhccCCCCCccccCHHHHHHHHHHHHHHHHHHHHH
Q 023558           87 KGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIERI  166 (280)
Q Consensus        87 kg~~eEmRfvaMrl~~~~q~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~w~~s~e~Y~~lL~~ly~VY~ALE~a  166 (280)
                      .+|.+.||...+++|+.-...                          .--+.+.+|.+++++|+++|.++|+||.+||++
T Consensus         3 ~~l~~~Lr~~T~~~H~~~e~~--------------------------~~~~~l~~g~~~~~~Y~~~L~~~y~vy~~LE~~   56 (240)
T 1we1_A            3 VNLASQLREGTKKSHSMAENV--------------------------GFVKCFLKGVVEKNSYRKLVGNLYFVYSAMEEE   56 (240)
T ss_dssp             CCHHHHHHHHTHHHHHHHHTS--------------------------HHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHCc--------------------------HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            579999999999999753210                          000124589999999999999999999999999


Q ss_pred             HHhcCC-cccccccCCCccchHHHHHHHHHHhhcCC-CCCCCCchHHHHHHHHHHHHhcCcchhHhHHHHHHhhhcccch
Q 023558          167 VDDSND-VAYAYFRKTGLERSEGISRDLEWFSEQGI-IIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQ  244 (280)
Q Consensus       167 v~~~~d-p~~a~f~~peL~Rs~aLekDL~~f~G~~~-~~p~P~pat~~Yv~rL~ela~~~P~lLVAHaYtRYLGDLSGGQ  244 (280)
                      ++++.+ |.++.|++|+|.|+++|++||++|+|+++ +.+.|++++..||+||+++++++|.+||||+||||+|||||||
T Consensus        57 ~~~~~~~p~l~~~~~~el~R~~~L~~DL~~l~g~~~~~~~~p~~a~~~yv~~i~~i~~~~P~~llg~~Yv~y~g~lsGGq  136 (240)
T 1we1_A           57 MAKFKDHPILSHIYFPELNRKQSLEQDLQFYYGSNWRQEVKISAAGQAYVDRVRQVAATAPELLVAHSYTRYLGDLSGGQ  136 (240)
T ss_dssp             HHHTTTSTTGGGGCCTTSCCHHHHHHHHHHHHCTTHHHHCCCCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred             HHhcccCchhHhhhhHhhhhHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhHHH
Confidence            999865 88899999999999999999999999884 4678899999999999999999999999999999999999999


Q ss_pred             hhhcc-------------------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023558          245 VIERQ-------------------------------------HWTRDEKNKSLKEAAKSFKFLGQIVRLII  278 (280)
Q Consensus       245 iI~r~-------------------------------------~Ldeeek~~iIeEA~~AF~lN~~Ifr~I~  278 (280)
                      ||+++                                     +||++++++||+||+.+|++|++||+.|-
T Consensus       137 ~i~~~~~~~l~L~~~g~~fy~f~~~~d~~~~k~~fr~~Ld~l~l~~~e~~~ii~eA~~aF~~n~~if~eL~  207 (240)
T 1we1_A          137 ILKKIAQNAMNLHDGGTAFYEFADIDDEKAFKNTYRQAMNDLPIDQATAERIVDEANDAFAMNMKMFNELE  207 (240)
T ss_dssp             HHHHHHHHHHTCSSSSCGGGCCTTCSSHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred             HHHHHHHHhcCcCcccchhcccCCcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99776                                     79999999999999999999999999874

>1n45_A Heme oxygenase 1, HO-1; alpha helices, heme-binding site, oxidoreductase; HET: HEM; 1.50A {Homo sapiens} SCOP: a.132.1.1 PDB: 1n3u_A* 1ozr_A* 1ozw_A* 1s13_A* 1s8c_A* 1t5p_A* 1twn_A* 1twr_A* 3czy_A* 3hok_A* 3k4f_A* 3tgm_A* 1xjz_A* 1xk3_A* 1xk2_A* 1ozl_A* 1oyk_A* 1oze_A* 1oyl_A* 1xk0_A* ...

Probab=100.00  E-value=5.2e-37  Score=273.53  Aligned_cols=168  Identities=15%  Similarity=0.264  Sum_probs=149.6

Q ss_pred             CccchHHHHHHHHhHhcccCCCCCCCCCCCCCCCCCCCCCcchhhhhhhccCCCCCccccCHHHHHHHHHHHHHHHHHHH
Q 023558           85 ESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIE  164 (280)
Q Consensus        85 e~kg~~eEmRfvaMrl~~~~q~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~w~~s~e~Y~~lL~~ly~VY~ALE  164 (280)
                      -.++|.++||...+++|++-.+.                          .-...+.+|.+++++|++||.++|+||.+||
T Consensus         9 ~~~~l~~~Lr~~T~~~H~~~e~~--------------------------~~~~~l~~g~~~~~~Y~~~L~~~y~vy~~lE   62 (233)
T 1n45_A            9 MPQDLSEALKEATKEVHTQAENA--------------------------EFMRNFQKGQVTRDGFKLVMASLYHIYVALE   62 (233)
T ss_dssp             -CCSHHHHHHHHTHHHHHHHHHS--------------------------HHHHHHHTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHcc--------------------------HHHHHhhCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34689999999999999863210                          1113357899999999999999999999999


Q ss_pred             HHHHhcCC-cccccccCC-CccchHHHHHHHHHHhhcCC-CCCCCCchHHHHHHHHHHHHhcCcchhHhHHHHHHhhhcc
Q 023558          165 RIVDDSND-VAYAYFRKT-GLERSEGISRDLEWFSEQGI-IIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVA  241 (280)
Q Consensus       165 ~av~~~~d-p~~a~f~~p-eL~Rs~aLekDL~~f~G~~~-~~p~P~pat~~Yv~rL~ela~~~P~lLVAHaYtRYLGDLS  241 (280)
                      ++++++.+ |.++.+++| +|.|+++|++||++|+|+++ ..+.|++++..||+||++++.++|.+|+||+||+|+||+|
T Consensus        63 ~~~~~~~~~p~~~~~~~~~el~R~~~L~~DL~~l~g~~~~~~~~~~~a~~~yv~~i~~i~~~~P~~l~ah~Yv~YeG~~~  142 (233)
T 1n45_A           63 EEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEPELLVAHAYTRYLGDLS  142 (233)
T ss_dssp             HHHHHHTTSTTTGGGCCHHHHCCHHHHHHHHHHHHCTTGGGTSCCCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH
T ss_pred             HHHHhcccCchhhhhcCHhhcccHHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence            99999875 778889999 89999999999999999874 4678899999999999999999999999999999999999


Q ss_pred             cchhhhcc---------------------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023558          242 GGQVIERQ---------------------------------------HWTRDEKNKSLKEAAKSFKFLGQIVRLII  278 (280)
Q Consensus       242 GGQiI~r~---------------------------------------~Ldeeek~~iIeEA~~AF~lN~~Ifr~I~  278 (280)
                      |||||+++                                       +||++++++||+||+.+|++|++||+.|-
T Consensus       143 GGq~i~~~~~~~l~L~~~~~g~~f~~f~~~~~~~~~k~~fr~~Ld~~~l~~~e~~~ii~eA~~aF~~n~~i~~el~  218 (233)
T 1n45_A          143 GGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQLYRSRMNSLEMTPAVRQRVIEEAKTAFLLNIQLFEELQ  218 (233)
T ss_dssp             HHHHHHHHHHHHHCCCSCSCSCGGGCCTTCSCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCCcceeeccCCcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999766                                       79999999999999999999999999874

>1j02_A Heme oxygenase 1; alpha helix, O2-analog bound form, oxidoreductase; HET: HEM; 1.70A {Rattus norvegicus} SCOP: a.132.1.1 PDB: 1irm_C 1dve_A* 1ix3_A* 1ivj_A* 1ix4_A* 1j2c_A* 1ubb_A* 1ulx_A* 1vgi_A* 2dy5_A* 2e7e_A* 2zvu_A* 1dvg_A* 3i9t_A* 3i9u_A*

Probab=100.00  E-value=8.9e-37  Score=278.74  Aligned_cols=168  Identities=16%  Similarity=0.257  Sum_probs=149.4

Q ss_pred             CccchHHHHHHHHhHhcccCCCCCCCCCCCCCCCCCCCCCcchhhhhhhccCCCCCccccCHHHHHHHHHHHHHHHHHHH
Q 023558           85 ESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIE  164 (280)
Q Consensus        85 e~kg~~eEmRfvaMrl~~~~q~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~w~~s~e~Y~~lL~~ly~VY~ALE  164 (280)
                      -.++|.++||...+++|++-.+.                          .-...+.+|.+++++|++||.++|+||.+||
T Consensus         9 ~~~~l~~~Lr~~T~~~H~~~E~~--------------------------~~~~~l~~g~vs~e~Y~~~L~~~y~vy~aLE   62 (267)
T 1j02_A            9 MSQDLSEALKEATKEVHIRAENS--------------------------EFMRNFQKGQVSREGFKLVMASLYHIYTALE   62 (267)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHTS--------------------------HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHcc--------------------------HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34689999999999999864311                          0112346889999999999999999999999


Q ss_pred             HHHHhcCC-cccccccCC-CccchHHHHHHHHHHhhcCC-CCCCCCchHHHHHHHHHHHHhcCcchhHhHHHHHHhhhcc
Q 023558          165 RIVDDSND-VAYAYFRKT-GLERSEGISRDLEWFSEQGI-IIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVA  241 (280)
Q Consensus       165 ~av~~~~d-p~~a~f~~p-eL~Rs~aLekDL~~f~G~~~-~~p~P~pat~~Yv~rL~ela~~~P~lLVAHaYtRYLGDLS  241 (280)
                      ++++++.+ |.++.+++| +|.|+++|++||+||+|+++ +.+.|++++..||+||++++.++|.+||||+||+|+||||
T Consensus        63 ~~l~~~~~~p~l~~~~~peel~R~~~L~~DL~~l~G~~w~~~~~p~~a~~~yv~~i~~ia~~~P~~llgh~Yv~y~g~ls  142 (267)
T 1j02_A           63 EEIERNKQNPVYAPLYFPEELHRRAALEQDMAFWYGPHWQEAIPYTPATQHYVKRLHEVGGTHPELLVAHAYTRYLGDLS  142 (267)
T ss_dssp             HHHHHTTTCTTTGGGCCHHHHCCHHHHHHHHHHHHCTTGGGTSCCCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTT
T ss_pred             HHHHHcccCcHHHHhcCHhhhhhHHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence            99999876 788889999 89999999999999999884 4778899999999999999999999999999999999999


Q ss_pred             cchhhhcc---------------------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023558          242 GGQVIERQ---------------------------------------HWTRDEKNKSLKEAAKSFKFLGQIVRLII  278 (280)
Q Consensus       242 GGQiI~r~---------------------------------------~Ldeeek~~iIeEA~~AF~lN~~Ifr~I~  278 (280)
                      |||||+++                                       +||++++++||+||+.+|++|++||+.|-
T Consensus       143 GGqii~k~l~k~lgL~~~~~gl~Fy~f~g~~d~~~~k~~fr~~Ld~l~ld~ee~~~iI~eA~~aF~ln~~if~eL~  218 (267)
T 1j02_A          143 GGQVLKKIAQKAMALPSSGEGLAFFTFPSIDNPTKFKQLYRARMNTLEMTPEVKHRVTEEAKTAFLLNIELFEELQ  218 (267)
T ss_dssp             HHHHHHHHHHHHHTCCTTCTTCGGGCCTTCSCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCCcceeeccCCcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999766                                       78999999999999999999999999874

>2q32_A Heme oxygenase 2, HO-2; structural genomics medical relevance, structural genomics community request, protein structure in PSI; HET: OXN; 2.40A {Homo sapiens} PDB: 2qpp_A* 2rgz_A*

Probab=100.00  E-value=1.3e-36  Score=277.07  Aligned_cols=170  Identities=17%  Similarity=0.266  Sum_probs=150.6

Q ss_pred             CCccchHHHHHHHHhHhcccCCCCCCCCCCCCCCCCCCCCCcchhhhhhhccCCCCCccccCHHHHHHHHHHHHHHHHHH
Q 023558           84 GESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTI  163 (280)
Q Consensus        84 ge~kg~~eEmRfvaMrl~~~~q~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~w~~s~e~Y~~lL~~ly~VY~AL  163 (280)
                      ...++|.++||...+++|++--+.                          .-...+.+|.+++++|++||.++|+||.+|
T Consensus        28 ~~~~~~~~~Lr~~T~~~H~~~e~~--------------------------~~~~~ll~g~~~~e~Y~~~L~~~y~vy~~L   81 (264)
T 2q32_A           28 MRMADLSELLKEGTKEAHDRAENT--------------------------QFVKDFLKGNIKKELFKLATTALYFTYSAL   81 (264)
T ss_dssp             -CTTSHHHHHHHHSHHHHHHHHTC--------------------------HHHHHHHTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHcc--------------------------HHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence            344689999999999999864210                          001234689999999999999999999999


Q ss_pred             HHHHHhcCC-cccccccCC-CccchHHHHHHHHHHhhcCC-CCCCCCchHHHHHHHHHHHHhcCcchhHhHHHHHHhhhc
Q 023558          164 ERIVDDSND-VAYAYFRKT-GLERSEGISRDLEWFSEQGI-IIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHV  240 (280)
Q Consensus       164 E~av~~~~d-p~~a~f~~p-eL~Rs~aLekDL~~f~G~~~-~~p~P~pat~~Yv~rL~ela~~~P~lLVAHaYtRYLGDL  240 (280)
                      |++++++.+ |.++.+++| +|.|+++|++||+||+|+++ ..+.|++++..||+||+++++++|.+||||+||||+|||
T Consensus        82 E~~l~~~~~~p~l~~~~~~~el~R~~~L~~DL~~l~G~~w~~~~~p~~a~~~yv~~i~~ia~~~P~~llgh~Yv~y~g~l  161 (264)
T 2q32_A           82 EEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQAPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDL  161 (264)
T ss_dssp             HHHHHHTTTCTTTGGGCCHHHHCCHHHHHHHHHHHHCTTGGGGCCCCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHcccChHhHhhcCHhhhhhHHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence            999999876 788889999 79999999999999999884 467889999999999999999999999999999999999


Q ss_pred             ccchhhhcc---------------------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 023558          241 AGGQVIERQ---------------------------------------HWTRDEKNKSLKEAAKSFKFLGQIVRLIIL  279 (280)
Q Consensus       241 SGGQiI~r~---------------------------------------~Ldeeek~~iIeEA~~AF~lN~~Ifr~I~~  279 (280)
                      ||||||+++                                       +||++++++||+||+.+|++|++||+.|-.
T Consensus       162 sGGqii~k~l~k~lgL~~~~~g~~Fy~f~g~~d~~~~k~~fr~~Ld~l~ld~ee~~~iI~eA~~aF~ln~~if~eL~~  239 (264)
T 2q32_A          162 SGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQ  239 (264)
T ss_dssp             HHHHHHHHHHHHHHTCCTTCTTCGGGCCTTCSCHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhHHHHHHHHHHhcCCCCCCccceeeccCCCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999998776                                       789999999999999999999999998853

>1wzd_A Heme oxygenase; electron-transfer, artificial metalloprotein; HET: YOK; 1.35A {Corynebacterium diphtheriae} SCOP: a.132.1.1 PDB: 1iw1_A* 1v8x_A* 1iw0_A* 1wzf_A* 1wzg_A* 2z68_A* 3i8r_A* 3moo_A* 1wnw_A* 1wnx_A* 1wnv_A*

Probab=100.00  E-value=1.7e-36  Score=265.94  Aligned_cols=167  Identities=22%  Similarity=0.327  Sum_probs=148.3

Q ss_pred             ccchHHHHHHHHhHhcccCCCCCCCCCCCCCCCCCCCCCcchhhhhhhccCCCCCccccCHHHHHHHHHHHHHHHHHHHH
Q 023558           86 SKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIER  165 (280)
Q Consensus        86 ~kg~~eEmRfvaMrl~~~~q~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~w~~s~e~Y~~lL~~ly~VY~ALE~  165 (280)
                      +++|.+.||...+++|++-.+..                          --..+.+|.+++++|++||.++|+||.+||+
T Consensus         5 ~~~l~~~Lr~~T~~~H~~~e~~~--------------------------~v~~l~~g~~~~~~Y~~~L~~~y~vy~~lE~   58 (215)
T 1wzd_A            5 TAGLAVELKQSTAQAHEKAEHST--------------------------FMSDLLKGRLGVAEFTRLQEQAWLFYTALEQ   58 (215)
T ss_dssp             --CHHHHHHHHTHHHHHHHHTCH--------------------------HHHHHHTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHccH--------------------------HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            35899999999999998654210                          0022568999999999999999999999999


Q ss_pred             HHHhcCC-cccccccCCCccchHHHHHHHHHHhhcC-C-CCCCCCchHHHHHHHHHHHHhcC-cchhHhHHHHHHhhhcc
Q 023558          166 IVDDSND-VAYAYFRKTGLERSEGISRDLEWFSEQG-I-IIPEPSTPGVSYAKYLEELAEKS-APLFLSHFYNIYFSHVA  241 (280)
Q Consensus       166 av~~~~d-p~~a~f~~peL~Rs~aLekDL~~f~G~~-~-~~p~P~pat~~Yv~rL~ela~~~-P~lLVAHaYtRYLGDLS  241 (280)
                      +++++.+ |.++.|++|+|.|+++|++||++|.|++ + +.+.|+|++..||+||++++.++ |.+||||+||+|+||+|
T Consensus        59 ~~~~~~~~p~~~~~~~~el~R~~~l~~DL~~l~~~~~w~~~~~~~~a~~~yv~~i~~~~~~~~p~~~lg~~Yv~YeG~~~  138 (215)
T 1wzd_A           59 AVDAVRASGFAESLLDPALNRAEVLARDLDKLNGSSEWRSRITASPAVIDYVNRLEEIRDNVDGPALVAHHYVRYLGDLS  138 (215)
T ss_dssp             HHHHHHHHTSSTTTSCGGGCCHHHHHHHHHHHHSSSTHHHHCCCCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHcccCchhhhhccchhccHHHHHHHHHHHcCCcchhhcCCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Confidence            9999875 8889999999999999999999999986 3 36789999999999999999989 99999999999999999


Q ss_pred             cchhhhcc-------------------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023558          242 GGQVIERQ-------------------------------------HWTRDEKNKSLKEAAKSFKFLGQIVRLII  278 (280)
Q Consensus       242 GGQiI~r~-------------------------------------~Ldeeek~~iIeEA~~AF~lN~~Ifr~I~  278 (280)
                      |||||+++                                     +||++++++||+||+.+|++|++||+.|-
T Consensus       139 GGq~i~~~~~~~l~l~~~g~~f~~~~~~~~~~~~~~~fr~~Ld~~~~~~~~~~~ii~eA~~aF~~~~~i~~el~  212 (215)
T 1wzd_A          139 GGQVIARMMQRHYGVDPEALGFYHFEGIAKLKVYKDEYREKLNNLELSDEQREHLLKEATDAFVFNHQVFADLG  212 (215)
T ss_dssp             HHHHHHHHHHHHHCCCGGGCGGGCCTTCSCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhcCcCcccceeeecCCcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999877                                     88999999999999999999999999874

>1wov_A Heme oxygenase 2; HOMO dimer, oxidoreductase; HET: HEM; 1.75A {Synechocystis SP} SCOP: a.132.1.1 PDB: 1wow_A* 1wox_A*

Probab=100.00  E-value=4.2e-36  Score=271.03  Aligned_cols=166  Identities=16%  Similarity=0.280  Sum_probs=147.5

Q ss_pred             cchHHHHHHHHhHhcccCCCCCCCCCCCCCCCCCCCCCcchhhhhhhccCCCCCccccCHHHHHHHHHHHHHHHHHHHHH
Q 023558           87 KGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIERI  166 (280)
Q Consensus        87 kg~~eEmRfvaMrl~~~~q~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~w~~s~e~Y~~lL~~ly~VY~ALE~a  166 (280)
                      .+|.+.||.....+|+.-.+.                          .--+.+.+|.+|+++|+++|.++|+||.+||++
T Consensus         2 ~~l~~~Lr~~T~~~H~~~e~~--------------------------~~v~~l~~g~~~~~~Y~~~L~~~y~vy~~LE~~   55 (250)
T 1wov_A            2 TNLAQKLRYGTQQSHTLAENT--------------------------AYMKCFLKGIVEREPFRQLLANLYYLYSALEAA   55 (250)
T ss_dssp             CCHHHHHHHHTHHHHHHHHTS--------------------------HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHch--------------------------HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            368899999999999753210                          001225789999999999999999999999999


Q ss_pred             HHhcCC-cccccccCCCccchHHHHHHHHHHhhcCC-CCCCCCchHHHHHHHHHHHHhcCcchhHhHHHHHHhhhcccch
Q 023558          167 VDDSND-VAYAYFRKTGLERSEGISRDLEWFSEQGI-IIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQ  244 (280)
Q Consensus       167 v~~~~d-p~~a~f~~peL~Rs~aLekDL~~f~G~~~-~~p~P~pat~~Yv~rL~ela~~~P~lLVAHaYtRYLGDLSGGQ  244 (280)
                      ++++.+ |.++.|++|+|.|+++|++||++|+|+++ +.+.|++++..||+||++++.++|.+||||+||+|+||+||||
T Consensus        56 ~~~~~~~p~l~~~~~~el~R~~~L~~DL~~l~g~~~~~~~~p~~a~~~yv~~i~~i~~~~P~~llgh~Yv~y~g~lsGGq  135 (250)
T 1wov_A           56 LRQHRDNEIISAIYFPELNRTDKLAEDLTYYYGPNWQQIIQPTPCAKIYVDRLKTIAASEPELLIAHCYTRYLGDLSGGQ  135 (250)
T ss_dssp             HHHTTTSHHHHHHCCGGGCCHHHHHHHHHHHHCTTHHHHCCCCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTHHH
T ss_pred             HHHhccChhhhhhccHhhhhHHHHHHHHHHHcCCCccccCCCChHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhHHH
Confidence            999875 78889999999999999999999999874 4678899999999999999999999999999999999999999


Q ss_pred             hhhcc-----------------------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023558          245 VIERQ-----------------------------------------HWTRDEKNKSLKEAAKSFKFLGQIVRLII  278 (280)
Q Consensus       245 iI~r~-----------------------------------------~Ldeeek~~iIeEA~~AF~lN~~Ifr~I~  278 (280)
                      ||+++                                         +||++++++||+||+.+|++|++||+.|-
T Consensus       136 ~i~~~l~k~l~L~~~~g~~fy~f~~~~~~~d~~~~k~~fr~~Ld~l~l~~~e~~~ii~eA~~aF~ln~~if~eL~  210 (250)
T 1wov_A          136 SLKNIIRSALQLPEGEGTAMYEFDSLPTPGDRRQFKEIYRDVLNSLPLDEATINRIVEEANYAFSLNREVMHDLE  210 (250)
T ss_dssp             HHHHHHHHHTTCCTTSSCGGGCCTTCCSHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred             HHHHHHHHhcCCCCcccceeeccCCccccccHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99877                                         78999999999999999999999999763

>1sk7_A Hypothetical protein PA-HO; heme oxygenase, heme degradation, regioselectivity, oxidored; HET: HEM; 1.60A {Pseudomonas aeruginosa} SCOP: a.132.1.2

Probab=99.83  E-value=1.1e-20  Score=164.50  Aligned_cols=125  Identities=14%  Similarity=0.192  Sum_probs=103.3

Q ss_pred             CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccccCCCccchHHHHHHHHHHhhcCCCCCCCCchHHHHHHHHH
Q 023558          140 ETWKPSMDAFVKYLVDSQLVFNTIERIVDDSND-VAYAYFRKTGLERSEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLE  218 (280)
Q Consensus       140 ~~w~~s~e~Y~~lL~~ly~VY~ALE~av~~~~d-p~~a~f~~peL~Rs~aLekDL~~f~G~~~~~p~P~pat~~Yv~rL~  218 (280)
                      .++.+++++|++||.++|+||.+||.+++.+.. +.+.  ..+++.|.+.|++||++|.+. +....|.|++        
T Consensus        36 ~~g~~~~~~Y~~~L~~~y~~y~~lE~~l~~~~~~~~~~--~~~e~~R~~~L~~DL~~lg~~-~~~~i~~p~~--------  104 (198)
T 1sk7_A           36 KEPFASRDNFARFVAAQYLFQHDLEPLYRNEALARLFP--GLASRARDDAARADLADLGHP-VPEGDQSVRE--------  104 (198)
T ss_dssp             HCTTSCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHST--TGGGGCCHHHHHHHHHHHTCC-CCCCCCTTTT--------
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccccccC--chHhhhhHHHHHHHHHHhCCC-CcccCCCccc--------
Confidence            468899999999999999999999999988654 4433  467999999999999999443 2222244432        


Q ss_pred             HHHhcCcchhHhHHHHHHhhhcccchhhhcc------------------------------------CCCHHHHHHHHHH
Q 023558          219 ELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ------------------------------------HWTRDEKNKSLKE  262 (280)
Q Consensus       219 ela~~~P~lLVAHaYtRYLGDLSGGQiI~r~------------------------------------~Ldeeek~~iIeE  262 (280)
                        ...+|..+++|.||+ .||+||||+|+++                                    ++|++++++||+|
T Consensus       105 --~~~~~~~~lG~~YV~-eGs~lGGq~l~~~~~~l~l~~~~g~~f~~~~~~~~~~~wk~f~~~Ld~l~~d~~~~~~ii~~  181 (198)
T 1sk7_A          105 --ADLSLAEALGWLFVS-EGSKLGAAFLFKKAAALELDENFGARHLAEPEGGRAQGWKSFVAILDGIELNEEEERLAAKG  181 (198)
T ss_dssp             --SCCCHHHHHHHHHHH-HHTTTTHHHHHHHHGGGTCBTTBBCGGGSCCTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_pred             --ccCChHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCcccchHhhCCCCccchHHHHHHHHHHhCCCCCHHHHHHHHHH
Confidence              122556789999999 8999999999887                                    7899999999999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 023558          263 AAKSFKFLGQIVRLII  278 (280)
Q Consensus       263 A~~AF~lN~~Ifr~I~  278 (280)
                      |+.+|.+|+++|+.|.
T Consensus       182 A~~aF~l~~~~l~~~~  197 (198)
T 1sk7_A          182 ASDAFNRFGDLLERTF  197 (198)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9999999999999875

>1j77_A HEMO, heme oxygenase; proximal histidine, distal helix, oxidoreductase; HET: HEM; 1.50A {Neisseria meningitidis} SCOP: a.132.1.2 PDB: 1p3t_A* 1p3u_A* 1p3v_A*

Probab=99.82  E-value=3.4e-20  Score=162.90  Aligned_cols=123  Identities=14%  Similarity=0.205  Sum_probs=102.3

Q ss_pred             CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccccCCCccchHHHHHHHHHHhhcCCCCC-CCCchHHHHHHHH
Q 023558          140 ETWKPSMDAFVKYLVDSQLVFNTIERIVDDSND-VAYAYFRKTGLERSEGISRDLEWFSEQGIIIP-EPSTPGVSYAKYL  217 (280)
Q Consensus       140 ~~w~~s~e~Y~~lL~~ly~VY~ALE~av~~~~d-p~~a~f~~peL~Rs~aLekDL~~f~G~~~~~p-~P~pat~~Yv~rL  217 (280)
                      .++.+++++|++||.++|+||.+||.+++.+.. +.+.  ..+++.|.+.|++||++| |.+...+ .|.+       + 
T Consensus        33 ~~g~~~~~~Y~~~L~~~y~~y~~lE~~l~~~~~~~~~~--~~~e~~R~~~L~~DL~~l-G~~~~~v~~~~~-------~-  101 (209)
T 1j77_A           33 VQPFVSKENYIKFLKLQSVFHKAVDHIYKDAELNKAIP--ELEYMARYDAVTQDLKDL-GEEPYKFDKELP-------Y-  101 (209)
T ss_dssp             TCTTSCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHST--TGGGGCCHHHHHHHHHHT-TCCCCCCSSCCC-------C-
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcccCcccC--ChHhhhhHHHHHHHHHHh-CCChhhccCCCC-------C-
Confidence            568899999999999999999999999988654 4433  368999999999999999 5543322 2221       1 


Q ss_pred             HHHHhcCcchhHhHHHHHHhhhcccchhhhcc------------------------------------CCCHHHHHHHHH
Q 023558          218 EELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ------------------------------------HWTRDEKNKSLK  261 (280)
Q Consensus       218 ~ela~~~P~lLVAHaYtRYLGDLSGGQiI~r~------------------------------------~Ldeeek~~iIe  261 (280)
                           -+|..+++|.||+ .||+||||+|+++                                    ++|++++++||+
T Consensus       102 -----~~~~~~~G~~YV~-eGs~lGGq~l~k~~~~l~l~~~~g~~f~~~~~~~~~~~w~~fr~~Ld~l~~d~~~~~~ii~  175 (209)
T 1j77_A          102 -----EAGNKAIGWLYCA-EGSNLGAAFLFKHAQKLDYNGEHGARHLAPHPDGRGKHWRAFVEHLNALNLTPEAEAEAIQ  175 (209)
T ss_dssp             -----CCHHHHHHHHHHH-HHHHHTTHHHHHHHHTTTCBTTBBCGGGSCCTTCHHHHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred             -----CChHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCcccchhhhCCCCcccHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence                 2456688999998 8999999999887                                    789999999999


Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 023558          262 EAAKSFKFLGQIVRLIIL  279 (280)
Q Consensus       262 EA~~AF~lN~~Ifr~I~~  279 (280)
                      ||+.+|.+|+++|+.+..
T Consensus       176 ~A~~aF~l~~~~f~~l~~  193 (209)
T 1j77_A          176 GAREAFAFYKVVLRETFG  193 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhc
Confidence            999999999999998753

>3dde_A TENA/THI-4 protein, domain of unknown function WI oxygenase-like fold; structural genomics, joint center for structural genomics; HET: MSE PGE; 2.30A {Shewanella denitrificans OS217}

Probab=99.40  E-value=1e-12  Score=115.30  Aligned_cols=138  Identities=9%  Similarity=-0.003  Sum_probs=112.2

Q ss_pred             CCccccCHHHHHHHHHHHHHHHHH----HHHHHHhcCCcc------cccccCCCccchHHHHHHHHHHhhcCC---CCCC
Q 023558          139 GETWKPSMDAFVKYLVDSQLVFNT----IERIVDDSNDVA------YAYFRKTGLERSEGISRDLEWFSEQGI---IIPE  205 (280)
Q Consensus       139 ~~~w~~s~e~Y~~lL~~ly~VY~A----LE~av~~~~dp~------~a~f~~peL~Rs~aLekDL~~f~G~~~---~~p~  205 (280)
                      ...+.++++.|..||.|.|+++..    |+.++.+..+..      +..+...++.+-..+.+|++.+ |-+.   ....
T Consensus        31 l~~GtL~~~~f~~yl~Qdy~yl~~~~r~la~a~~ka~~~~~~~~~~~~~~~~~e~~~e~~~~~~l~~~-G~~~~~~~~~~  109 (239)
T 3dde_A           31 VLDGKATKALYAIYMTETYHYTKHNAKNQALVGIMGKDLPGKYLSFCFHHAHEEAGHELMALSDIASI-GFDREDVLSSK  109 (239)
T ss_dssp             HHTTCCCHHHHHHHHHHHHHHHTTHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHTTTHHHHHHHHHHT-TCCHHHHHTCC
T ss_pred             HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHChHHHHHHHHHHh-CCCHHHHHhCC
Confidence            356799999999999999999855    888888887743      3445667888887889998876 6652   2356


Q ss_pred             CCchHHHHHHHHHHHHh-cCcchhHhHHHH-HHhhhcccchhhhcc----------------------------------
Q 023558          206 PSTPGVSYAKYLEELAE-KSAPLFLSHFYN-IYFSHVAGGQVIERQ----------------------------------  249 (280)
Q Consensus       206 P~pat~~Yv~rL~ela~-~~P~lLVAHaYt-RYLGDLSGGQiI~r~----------------------------------  249 (280)
                      |+|++.+|+++|..++. .+|..++||+|+ .+.++ +|||++..+                                  
T Consensus       110 ~~pat~aY~~~l~~~a~~~~~~~~la~~~~~E~~y~-~~~~~~~~l~~~~~l~~~~~~f~~~h~~~d~~h~~~~~~~ld~  188 (239)
T 3dde_A          110 PLPATETLIAYLYWISATGNPVQRLGYSYWAENVYG-YIDPVLKAIQSTLDLTPQSMKFFIAHSKIDAKHAEEVNEMLHE  188 (239)
T ss_dssp             CCHHHHHHHHHHHHHHHSSCGGGGHHHHHHHHTCHH-HHHHHHHHHHHHTTCCGGGGHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CChHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhH-HHHHHHHHHHHHhCcCHHHHHHHHHHHhcchhHHHHHHHHHHH
Confidence            88899999999999875 689999999995 33334 899987644                                  


Q ss_pred             -CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023558          250 -HWTRDEKNKSLKEAAKSFKFLGQIVRLII  278 (280)
Q Consensus       250 -~Ldeeek~~iIeEA~~AF~lN~~Ifr~I~  278 (280)
                       .+|++++++||++|+.+|++|.++|+.|-
T Consensus       189 ~~~~~~~~~~ii~~a~~~~~l~~~~f~~l~  218 (239)
T 3dde_A          189 VCKTQEDVDSVVAVMENSLVLTARILDDVW  218 (239)
T ss_dssp             HCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             68999999999999999999999999874

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	280
d1wova1	249	a.132.1.1 (A:2-250) Heme oxygenase 2 {Synechocysti	6e-16
d1n45a_	214	a.132.1.1 (A:) Heme oxygenase-1 (HO-1) {Human (Hom	4e-13
d1wzda1	207	a.132.1.1 (A:7-213) Heme oxygenase HmuO {Corynebac	7e-13
d1we1a_	222	a.132.1.1 (A:) Heme oxygenase-1 (HO-1) {Synechocys	2e-12

>d1wova1 a.132.1.1 (A:2-250) Heme oxygenase 2 {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 249

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: Eukaryotic type heme oxygenase
domain: Heme oxygenase 2
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

 Score = 73.2 bits (179), Expect = 6e-16
 Identities = 23/127 (18%), Positives = 51/127 (40%), Gaps = 4/127 (3%)

Query: 145 SMDAFVKYLVDSQLVFNTIERIVDDSNDV-AYAYFRKTGLERSEGISRDLE-WFSEQGII 202
             + F + L +   +++ +E  +    D    +      L R++ ++ DL  ++      
Sbjct: 33  EREPFRQLLANLYYLYSALEAALRQHRDNEIISAIYFPELNRTDKLAEDLTYYYGPNWQQ 92

Query: 203 IPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQHWTRDEKNKSLKE 262
           I +P+     Y   L+ +A     L ++H Y  Y   ++GGQ +  ++  R        E
Sbjct: 93  IIQPTPCAKIYVDRLKTIAASEPELLIAHCYTRYLGDLSGGQSL--KNIIRSALQLPEGE 150

Query: 263 AAKSFKF 269
               ++F
Sbjct: 151 GTAMYEF 157

>d1n45a_ a.132.1.1 (A:) Heme oxygenase-1 (HO-1) {Human (Homo sapiens) [TaxId: 9606]} Length = 214

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: Eukaryotic type heme oxygenase
domain: Heme oxygenase-1 (HO-1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.7 bits (157), Expect = 4e-13
 Identities = 28/193 (14%), Positives = 62/193 (32%), Gaps = 45/193 (23%)

Query: 125 DDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIERIVD--DSNDVAYAYFRKTG 182
              E+ + ++    G+  +   D F   +     ++  +E  ++    + V    +    
Sbjct: 17  TQAENAEFMRNFQKGQVTR---DGFKLVMASLYHIYVALEEEIERNKESPVFAPVYFPEE 73

Query: 183 LERSEGISRDLE-WFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVA 241
           L R   + +DL  W+  +   +   +     Y K L E+      L ++H Y  Y   ++
Sbjct: 74  LHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEPELLVAHAYTRYLGDLS 133

Query: 242 GGQVIERQ---------------------------------------HWTRDEKNKSLKE 262
           GGQV+++                                          T   + + ++E
Sbjct: 134 GGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQLYRSRMNSLEMTPAVRQRVIEE 193

Query: 263 AAKSFKFLGQIVR 275
           A  +F    Q+  
Sbjct: 194 AKTAFLLNIQLFE 206

>d1wzda1 a.132.1.1 (A:7-213) Heme oxygenase HmuO {Corynebacterium diphtheriae [TaxId: 1717]} Length = 207

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: Eukaryotic type heme oxygenase
domain: Heme oxygenase HmuO
species: Corynebacterium diphtheriae [TaxId: 1717]

 Score = 64.0 bits (155), Expect = 7e-13
 Identities = 32/175 (18%), Positives = 59/175 (33%), Gaps = 41/175 (23%)

Query: 142 WKPSMDAFVKYLVDSQLVFNTIERIVDDSNDVAYA-YFRKTGLERSEGISRDLEWF--SE 198
            +  +  F +    + L +  +E+ VD      +A       L R+E ++RDL+    S 
Sbjct: 29  GRLGVAEFTRLQEQAWLFYTALEQAVDAVRASGFAESLLDPALNRAEVLARDLDKLNGSS 88

Query: 199 QGIIIPEPSTPGVSYAKYLEELAEKSAP-LFLSHFYNIYFSHVAGGQV------------ 245
           +       S   + Y   LEE+ +       ++H Y  Y   ++GGQV            
Sbjct: 89  EWRSRITASPAVIDYVNRLEEIRDNVDGPALVAHHYVRYLGDLSGGQVIARMMQRHYGVD 148

Query: 246 -------------------------IERQHWTRDEKNKSLKEAAKSFKFLGQIVR 275
                                    +     + +++   LKEA  +F F  Q+  
Sbjct: 149 PEALGFYHFEGIAKLKVYKDEYREKLNNLELSDEQREHLLKEATDAFVFNHQVFA 203

>d1we1a_ a.132.1.1 (A:) Heme oxygenase-1 (HO-1) {Synechocystis sp. [TaxId: 1143]} Length = 222

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: Eukaryotic type heme oxygenase
domain: Heme oxygenase-1 (HO-1)
species: Synechocystis sp. [TaxId: 1143]

 Score = 62.8 bits (152), Expect = 2e-12
 Identities = 22/170 (12%), Positives = 57/170 (33%), Gaps = 39/170 (22%)

Query: 145 SMDAFVKYLVDSQLVFNTIERIVDDSNDV-AYAYFRKTGLERSEGISRDLE-WFSEQGII 202
             +++ K + +   V++ +E  +    D    ++     L R + + +DL+ ++      
Sbjct: 34  EKNSYRKLVGNLYFVYSAMEEEMAKFKDHPILSHIYFPELNRKQSLEQDLQFYYGSNWRQ 93

Query: 203 IPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVI---------------- 246
             + S  G +Y   + ++A  +  L ++H Y  Y   ++GGQ++                
Sbjct: 94  EVKISAAGQAYVDRVRQVAATAPELLVAHSYTRYLGDLSGGQILKKIAQNAMNLHDGGTA 153

Query: 247 ---------------------ERQHWTRDEKNKSLKEAAKSFKFLGQIVR 275
                                      +    + + EA  +F    ++  
Sbjct: 154 FYEFADIDDEKAFKNTYRQAMNDLPIDQATAERIVDEANDAFAMNMKMFN 203

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	280
d1wova1	249	Heme oxygenase 2 {Synechocystis sp. pcc 6803 [TaxI	100.0
d1wzda1	207	Heme oxygenase HmuO {Corynebacterium diphtheriae [	99.97
d1n45a_	214	Heme oxygenase-1 (HO-1) {Human (Homo sapiens) [Tax	99.97
d1we1a_	222	Heme oxygenase-1 (HO-1) {Synechocystis sp. [TaxId:	99.97
d1sk7a_	187	Heme oxygenase HemO (PigA) {Pseudomonas aeruginosa	99.86
d1j77a_	200	Heme oxygenase HemO (PigA) {Neisseria meningitidis	99.84
d1wwma1	180	Hypothetical protein TTHA0169 (TT2028) {Thermus th	80.46
d1rcwa_	213	Hypothetical protein CT610 {Chlamydia trachomatis	80.46

>d1wova1 a.132.1.1 (A:2-250) Heme oxygenase 2 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: Eukaryotic type heme oxygenase
domain: Heme oxygenase 2
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=100.00  E-value=7.3e-37  Score=273.71  Aligned_cols=140  Identities=17%  Similarity=0.301  Sum_probs=131.0

Q ss_pred             CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccccCCCccchHHHHHHHHHHhhcC-CCCCCCCchHHHHHH
Q 023558          138 DGETWKPSMDAFVKYLVDSQLVFNTIERIVDDSND-VAYAYFRKTGLERSEGISRDLEWFSEQG-IIIPEPSTPGVSYAK  215 (280)
Q Consensus       138 ~~~~w~~s~e~Y~~lL~~ly~VY~ALE~av~~~~d-p~~a~f~~peL~Rs~aLekDL~~f~G~~-~~~p~P~pat~~Yv~  215 (280)
                      .+..+.++++.|+++|.++|+||.+||++++++.+ +.++.|+.|+|.|+++|++||++|+|.+ ...+.|++++..||+
T Consensus        26 ~l~~g~~s~~~Y~~~L~~~y~vY~~LE~~~~~~~~~~~~~~~~~~~l~R~~~l~~DL~~l~g~~~~~~~~~~~at~~Yv~  105 (249)
T d1wova1          26 CFLKGIVEREPFRQLLANLYYLYSALEAALRQHRDNEIISAIYFPELNRTDKLAEDLTYYYGPNWQQIIQPTPCAKIYVD  105 (249)
T ss_dssp             HHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHCCGGGCCHHHHHHHHHHHHCTTHHHHCCCCHHHHHHHH
T ss_pred             HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccChhhhcchhHHHHHHHHcCCCchhcCCCChHHHHHHH
Confidence            35668999999999999999999999999999876 6678899999999999999999999988 446788999999999


Q ss_pred             HHHHHHhcCcchhHhHHHHHHhhhcccchhhhcc-----------------------------------------CCCHH
Q 023558          216 YLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ-----------------------------------------HWTRD  254 (280)
Q Consensus       216 rL~ela~~~P~lLVAHaYtRYLGDLSGGQiI~r~-----------------------------------------~Ldee  254 (280)
                      ||+++++++|.+|+||+|||||||+||||||+++                                         +||++
T Consensus       106 ~i~~i~~~~P~~llah~YvrylGdlsGGQ~I~k~l~~~l~l~~~~g~~fy~F~~~~~~~d~~~fK~~~r~~ld~~~~~~~  185 (249)
T d1wova1         106 RLKTIAASEPELLIAHCYTRYLGDLSGGQSLKNIIRSALQLPEGEGTAMYEFDSLPTPGDRRQFKEIYRDVLNSLPLDEA  185 (249)
T ss_dssp             HHHHHHHHCGGGHHHHHHHHHHHHTTHHHHHHHHHHHHTTCCTTSSCGGGCCTTCCSHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred             HHHHHHhhCHHHHHHHHHHHHHHHhccchHHHHHHHhhcCCCCCCccceeecCCCCchhHHHHHHHHHHHHHhccCCCHH
Confidence            9999999999999999999999999999999987                                         78999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Q 023558          255 EKNKSLKEAAKSFKFLGQIVRLI  277 (280)
Q Consensus       255 ek~~iIeEA~~AF~lN~~Ifr~I  277 (280)
                      ++++||+||+.||++|++||+.|
T Consensus       186 ~~~~ii~EA~~aF~ln~~lf~eL  208 (249)
T d1wova1         186 TINRIVEEANYAFSLNREVMHDL  208 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999875

>d1wzda1 a.132.1.1 (A:7-213) Heme oxygenase HmuO {Corynebacterium diphtheriae [TaxId: 1717]}

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: Eukaryotic type heme oxygenase
domain: Heme oxygenase HmuO
species: Corynebacterium diphtheriae [TaxId: 1717]

Probab=99.97  E-value=3.5e-32  Score=232.98  Aligned_cols=139  Identities=24%  Similarity=0.371  Sum_probs=127.3

Q ss_pred             CCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccccCCCccchHHHHHHHHHHhhcC--CCCCCCCchHHHHHH
Q 023558          139 GETWKPSMDAFVKYLVDSQLVFNTIERIVDDSND-VAYAYFRKTGLERSEGISRDLEWFSEQG--IIIPEPSTPGVSYAK  215 (280)
Q Consensus       139 ~~~w~~s~e~Y~~lL~~ly~VY~ALE~av~~~~d-p~~a~f~~peL~Rs~aLekDL~~f~G~~--~~~p~P~pat~~Yv~  215 (280)
                      ...+.+|++.|+++|.++|.||.+||.+++++.+ +.+..|.+|++.|+++|++||++|.|..  ...+.|++++.+|++
T Consensus        26 l~~g~~~~~~Y~~~L~~~y~~y~~lE~~l~~~~~~~~~~~~~~~~~~R~~~l~~DL~~l~~~~~~~~~~~~~~~~~~y~~  105 (207)
T d1wzda1          26 LLKGRLGVAEFTRLQEQAWLFYTALEQAVDAVRASGFAESLLDPALNRAEVLARDLDKLNGSSEWRSRITASPAVIDYVN  105 (207)
T ss_dssp             HHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTSCGGGCCHHHHHHHHHHHHSSSTHHHHCCCCHHHHHHHH
T ss_pred             HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhccCHHHhhhhhHHHHHHHHcCCccccccCCCChhHHHHHH
Confidence            4677899999999999999999999999998876 5667899999999999999999998875  335678889999999


Q ss_pred             HHHHHHh-cCcchhHhHHHHHHhhhcccchhhhcc-------------------------------------CCCHHHHH
Q 023558          216 YLEELAE-KSAPLFLSHFYNIYFSHVAGGQVIERQ-------------------------------------HWTRDEKN  257 (280)
Q Consensus       216 rL~ela~-~~P~lLVAHaYtRYLGDLSGGQiI~r~-------------------------------------~Ldeeek~  257 (280)
                      ||.+++. .+|..++||+||+|+|+++|||||+++                                     +||+++++
T Consensus       106 ~~~~~~~~~~p~~llg~~Yv~e~G~~~GGq~i~k~l~~~l~l~~~~~~fy~f~~~~~~~~~k~~~r~~l~~~~~~~~~~~  185 (207)
T d1wzda1         106 RLEEIRDNVDGPALVAHHYVRYLGDLSGGQVIARMMQRHYGVDPEALGFYHFEGIAKLKVYKDEYREKLNNLELSDEQRE  185 (207)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGCGGGCCTTCSCHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred             HHHHHhccCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHcCCCCCCccccccCCcCCHHHHHHHHHHHHhccCCCHHHHH
Confidence            9999976 589999999999999999999999987                                     78999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHH
Q 023558          258 KSLKEAAKSFKFLGQIVRLI  277 (280)
Q Consensus       258 ~iIeEA~~AF~lN~~Ifr~I  277 (280)
                      +||+||+.+|++|++||+.|
T Consensus       186 ~ii~eA~~aF~~~~~if~el  205 (207)
T d1wzda1         186 HLLKEATDAFVFNHQVFADL  205 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999976

>d1n45a_ a.132.1.1 (A:) Heme oxygenase-1 (HO-1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: Eukaryotic type heme oxygenase
domain: Heme oxygenase-1 (HO-1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.3e-31  Score=228.52  Aligned_cols=139  Identities=18%  Similarity=0.312  Sum_probs=128.0

Q ss_pred             CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccccCC-CccchHHHHHHHHHHhhcC-CCCCCCCchHHHHHHH
Q 023558          140 ETWKPSMDAFVKYLVDSQLVFNTIERIVDDSND-VAYAYFRKT-GLERSEGISRDLEWFSEQG-IIIPEPSTPGVSYAKY  216 (280)
Q Consensus       140 ~~w~~s~e~Y~~lL~~ly~VY~ALE~av~~~~d-p~~a~f~~p-eL~Rs~aLekDL~~f~G~~-~~~p~P~pat~~Yv~r  216 (280)
                      -++.+++++|+++|.++|.||.+||++++++.+ +.++.+.++ ++.|++.|++||++|+|.+ ...+.|++++..|+++
T Consensus        29 ~~g~~t~~~Y~~~L~~~y~vy~~lE~~l~~~~~~~~~~~~~~~~~~~R~~~l~~DL~~l~g~~~~~~~~~~~~~~~~~~~  108 (214)
T d1n45a_          29 QKGQVTRDGFKLVMASLYHIYVALEEEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKR  108 (214)
T ss_dssp             HTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTGGGCCHHHHCCHHHHHHHHHHHHCTTGGGTSCCCHHHHHHHHH
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCccchhhcChHhhccchhHHHHHHHhcCCchhccCCCChHHHHHHHH
Confidence            456899999999999999999999999999876 566666665 8999999999999999887 5567788999999999


Q ss_pred             HHHHHhcCcchhHhHHHHHHhhhcccchhhhcc---------------------------------------CCCHHHHH
Q 023558          217 LEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ---------------------------------------HWTRDEKN  257 (280)
Q Consensus       217 L~ela~~~P~lLVAHaYtRYLGDLSGGQiI~r~---------------------------------------~Ldeeek~  257 (280)
                      |.+++.++|..|+||+||+|+|+++|||||+++                                       .||+++++
T Consensus       109 ~~~~~~~~p~~llg~~YV~e~g~~~GGq~i~~~~~~~l~l~~~~~~~~f~~~~~~~~~~~~k~~f~~~l~~~~~~~~~~~  188 (214)
T d1n45a_         109 LHEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQLYRSRMNSLEMTPAVRQ  188 (214)
T ss_dssp             HHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCSCSCGGGCCTTCSCHHHHHHHHHHHHHHCCCCHHHHH
T ss_pred             HhhhcccCHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcCCCCCCCcceeeecCCcccHHHHHHHHHHHHHcccCCHHHHH
Confidence            999999999999999999999999999999996                                       78999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q 023558          258 KSLKEAAKSFKFLGQIVRLII  278 (280)
Q Consensus       258 ~iIeEA~~AF~lN~~Ifr~I~  278 (280)
                      +||+||+.+|++|++||+.|-
T Consensus       189 ~ii~eA~~aF~~~~~lf~el~  209 (214)
T d1n45a_         189 RVIEEAKTAFLLNIQLFEELQ  209 (214)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999874

>d1we1a_ a.132.1.1 (A:) Heme oxygenase-1 (HO-1) {Synechocystis sp. [TaxId: 1143]}

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: Eukaryotic type heme oxygenase
domain: Heme oxygenase-1 (HO-1)
species: Synechocystis sp. [TaxId: 1143]

Probab=99.97  E-value=2.9e-31  Score=229.05  Aligned_cols=140  Identities=16%  Similarity=0.281  Sum_probs=129.8

Q ss_pred             CCCccccCHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccccCCCccchHHHHHHHHHHhhcC-CCCCCCCchHHHHHH
Q 023558          138 DGETWKPSMDAFVKYLVDSQLVFNTIERIVDDSND-VAYAYFRKTGLERSEGISRDLEWFSEQG-IIIPEPSTPGVSYAK  215 (280)
Q Consensus       138 ~~~~w~~s~e~Y~~lL~~ly~VY~ALE~av~~~~d-p~~a~f~~peL~Rs~aLekDL~~f~G~~-~~~p~P~pat~~Yv~  215 (280)
                      ....+.+|++.|+++|.++|+||.+||.+++++.+ +....+.+|++.|+++|++||++|.|.+ ...+.|++++..|+.
T Consensus        27 ~l~~g~~s~~~Y~~~L~~~y~vy~~lE~~l~~~~~~~~~~~~~~~~~~R~~~l~~DL~~l~~~~~~~~~~~~~~~~~~~~  106 (222)
T d1we1a_          27 CFLKGVVEKNSYRKLVGNLYFVYSAMEEEMAKFKDHPILSHIYFPELNRKQSLEQDLQFYYGSNWRQEVKISAAGQAYVD  106 (222)
T ss_dssp             HHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTSTTGGGGCCTTSCCHHHHHHHHHHHHCTTHHHHCCCCHHHHHHHH
T ss_pred             HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccChhhhhHHHHHHHHHHccCccccccCCCChhHHHHHH
Confidence            34677999999999999999999999999999876 6667899999999999999999998877 456778899999999


Q ss_pred             HHHHHHhcCcchhHhHHHHHHhhhcccchhhhcc-------------------------------------CCCHHHHHH
Q 023558          216 YLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ-------------------------------------HWTRDEKNK  258 (280)
Q Consensus       216 rL~ela~~~P~lLVAHaYtRYLGDLSGGQiI~r~-------------------------------------~Ldeeek~~  258 (280)
                      ||++++.++|..|+||+||||+||++|||+|+++                                     .+|++++++
T Consensus       107 ~~~~~~~~~p~~llg~~YV~~~g~~~GGq~i~~~~~~~~~l~~~~~~fy~~~~~~~~~~~k~~~~~~l~~~~~~~~~~~~  186 (222)
T d1we1a_         107 RVRQVAATAPELLVAHSYTRYLGDLSGGQILKKIAQNAMNLHDGGTAFYEFADIDDEKAFKNTYRQAMNDLPIDQATAER  186 (222)
T ss_dssp             HHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSSCGGGCCTTCSSHHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred             HHHhhhccCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHcCCCCCCccceecCCcccHHHHHHHHHHHHHccCCCHHHHHH
Confidence            9999999999999999999999999999999987                                     789999999


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 023558          259 SLKEAAKSFKFLGQIVRLI  277 (280)
Q Consensus       259 iIeEA~~AF~lN~~Ifr~I  277 (280)
                      ||+||+.+|++|++||+.|
T Consensus       187 ii~eA~~aF~~~~~lf~el  205 (222)
T d1we1a_         187 IVDEANDAFAMNMKMFNEL  205 (222)
T ss_dssp             HHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999876

>d1sk7a_ a.132.1.2 (A:) Heme oxygenase HemO (PigA) {Pseudomonas aeruginosa [TaxId: 287]}

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: Heme oxygenase HemO (PigA)
domain: Heme oxygenase HemO (PigA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.86  E-value=4.6e-22  Score=168.44  Aligned_cols=122  Identities=14%  Similarity=0.164  Sum_probs=102.1

Q ss_pred             ccCHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccccCCCccchHHHHHHHHHHhhcCCCCCCCCchHHHHHHHHHHHH
Q 023558          143 KPSMDAFVKYLVDSQLVFNTIERIVDDSND-VAYAYFRKTGLERSEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELA  221 (280)
Q Consensus       143 ~~s~e~Y~~lL~~ly~VY~ALE~av~~~~d-p~~a~f~~peL~Rs~aLekDL~~f~G~~~~~p~P~pat~~Yv~rL~ela  221 (280)
                      ..|+++|.++|.++|.||.+||.+++.+.+ +.+..  .+++.|++.|++||++|.++....+.+.++           +
T Consensus        28 ~~~~~~Y~~~L~~~~~~~~~lE~~l~~~~~~~~~~~--~~~~~R~~~L~~DL~~l~~~~~~~~~~~~~-----------~   94 (187)
T d1sk7a_          28 FASRDNFARFVAAQYLFQHDLEPLYRNEALARLFPG--LASRARDDAARADLADLGHPVPEGDQSVRE-----------A   94 (187)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHSTT--GGGGCCHHHHHHHHHHHTCCCCCCCCTTTT-----------S
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccc--cHHHHHHHHHHHHHHHhCCCCcccccCcCc-----------C
Confidence            359999999999999999999999987765 33332  478999999999999997765333222221           1


Q ss_pred             hcCcchhHhHHHHHHhhhcccchhhhcc------------------------------------CCCHHHHHHHHHHHHH
Q 023558          222 EKSAPLFLSHFYNIYFSHVAGGQVIERQ------------------------------------HWTRDEKNKSLKEAAK  265 (280)
Q Consensus       222 ~~~P~lLVAHaYtRYLGDLSGGQiI~r~------------------------------------~Ldeeek~~iIeEA~~  265 (280)
                      ..+|..+++|+|| |+|+++|||||+++                                    ++|++++++||+||+.
T Consensus        95 ~~~~a~~lg~~YV-~eGs~lGGq~i~r~l~~~~~~~~~g~~f~~~~~~~~~~~w~~f~~~L~~~~~~~~~~~~~i~~A~~  173 (187)
T d1sk7a_          95 DLSLAEALGWLFV-SEGSKLGAAFLFKKAAALELDENFGARHLAEPEGGRAQGWKSFVAILDGIELNEEEERLAAKGASD  173 (187)
T ss_dssp             CCCHHHHHHHHHH-HHHTTTTHHHHHHHHGGGTCBTTBBCGGGSCCTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHH-HHhhHhHHHHHHHHHHHhcCCCcccccccCCCCcccHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence            3567789999999 99999999999988                                    7899999999999999


Q ss_pred             HHHHHHHHHHHHH
Q 023558          266 SFKFLGQIVRLII  278 (280)
Q Consensus       266 AF~lN~~Ifr~I~  278 (280)
                      +|.+|+++|+.|.
T Consensus       174 aF~~~~~~~~e~~  186 (187)
T d1sk7a_         174 AFNRFGDLLERTF  186 (187)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999999885

>d1j77a_ a.132.1.2 (A:) Heme oxygenase HemO (PigA) {Neisseria meningitidis [TaxId: 487]}

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: Heme oxygenase HemO (PigA)
domain: Heme oxygenase HemO (PigA)
species: Neisseria meningitidis [TaxId: 487]

Probab=99.84  E-value=3.4e-21  Score=164.80  Aligned_cols=124  Identities=14%  Similarity=0.202  Sum_probs=101.9

Q ss_pred             CccccCHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccccCCCccchHHHHHHHHHHhhcCCCCCCCCchHHHHHHHHH
Q 023558          140 ETWKPSMDAFVKYLVDSQLVFNTIERIVDDSND-VAYAYFRKTGLERSEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLE  218 (280)
Q Consensus       140 ~~w~~s~e~Y~~lL~~ly~VY~ALE~av~~~~d-p~~a~f~~peL~Rs~aLekDL~~f~G~~~~~p~P~pat~~Yv~rL~  218 (280)
                      .....+++.|.++|.++|.||.+||.+++.+.. +.+..+  +++.|++.|++||++|.+.....+.+.+          
T Consensus        26 ~~~~~~~~~Y~~~L~~~y~~y~~lE~~~~~~~~~~~~~~~--~~~~R~~~L~~DL~~Lg~~~~~~~~~~~----------   93 (200)
T d1j77a_          26 VQPFVSKENYIKFLKLQSVFHKAVDHIYKDAELNKAIPEL--EYMARYDAVTQDLKDLGEEPYKFDKELP----------   93 (200)
T ss_dssp             TCTTSCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHSTTG--GGGCCHHHHHHHHHHTTCCCCCCSSCCC----------
T ss_pred             hccCCCHHHHHHHHHHHHHHHHHHHHHHHhCcccccccch--HhhcCcHHHHHHHHHhCCChhhccccCC----------
Confidence            455689999999999999999999999976654 333333  7899999999999997443322222222          


Q ss_pred             HHHhcCcchhHhHHHHHHhhhcccchhhhcc------------------------------------CCCHHHHHHHHHH
Q 023558          219 ELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ------------------------------------HWTRDEKNKSLKE  262 (280)
Q Consensus       219 ela~~~P~lLVAHaYtRYLGDLSGGQiI~r~------------------------------------~Ldeeek~~iIeE  262 (280)
                         ..+|..+++|+|| |.|+++|||+|+++                                    ++|++++++||+|
T Consensus        94 ---~~~~~~~lg~~YV-~eGs~lGGq~i~r~~~~~~~~~~~~~~f~~~~~~~~~~~w~~f~~~L~~~~~~~~~~~~ii~~  169 (200)
T d1j77a_          94 ---YEAGNKAIGWLYC-AEGSNLGAAFLFKHAQKLDYNGEHGARHLAPHPDGRGKHWRAFVEHLNALNLTPEAEAEAIQG  169 (200)
T ss_dssp             ---CCCHHHHHHHHHH-HHHHHHTTHHHHHHHHTTTCBTTBBCGGGSCCTTCHHHHHHHHHHHHHHTCCCHHHHHHHHHH
T ss_pred             ---cCCHHHHHHHHHH-HhhHHHHHHHHHHHHHHhcCCCcccchhhcCCccccHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence               2467889999999 89999999999988                                    7899999999999


Q ss_pred             HHHHHHHHHHHHHHHHh
Q 023558          263 AAKSFKFLGQIVRLIIL  279 (280)
Q Consensus       263 A~~AF~lN~~Ifr~I~~  279 (280)
                      |+.+|.+|..+|+.|..
T Consensus       170 A~~aF~~~~~~~~e~~~  186 (200)
T d1j77a_         170 AREAFAFYKVVLRETFG  186 (200)
T ss_dssp             HHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhhc
Confidence            99999999999999864

>d1wwma1 a.132.1.3 (A:11-190) Hypothetical protein TTHA0169 (TT2028) {Thermus thermophilus [TaxId: 274]}

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: TENA/THI-4
domain: Hypothetical protein TTHA0169 (TT2028)
species: Thermus thermophilus [TaxId: 274]

Probab=80.46  E-value=7.3  Score=30.56  Aligned_cols=103  Identities=14%  Similarity=0.160  Sum_probs=60.8

Q ss_pred             ccCHHHHHHHHHHHHHHHHHHHH----HHHhcCCcccccccCCCccchHHHHHHHHHHhhcCC-CCCCCCchHHHHHHHH
Q 023558          143 KPSMDAFVKYLVDSQLVFNTIER----IVDDSNDVAYAYFRKTGLERSEGISRDLEWFSEQGI-IIPEPSTPGVSYAKYL  217 (280)
Q Consensus       143 ~~s~e~Y~~lL~~ly~VY~ALE~----av~~~~dp~~a~f~~peL~Rs~aLekDL~~f~G~~~-~~p~P~pat~~Yv~rL  217 (280)
                      .++.+.|..||.|=|.--...=+    ++.+..++....+    +.....+...+.+|...+. -...|+|++..|.++|
T Consensus        15 ~L~~e~F~~YL~QD~~yl~~~~r~~a~~~~ka~~~~~~~~----~~~~~~~~~E~~~~~~~~~~~~~~~~p~~~~Y~~~l   90 (180)
T d1wwma1          15 RLDEERFRFWLQQDYPFVEALYRYQVGLLLEAPQAHRAPL----VQALMATVEELDWLLLQGASPSAPVHPVRAGYIALL   90 (180)
T ss_dssp             CCCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCHHHHHHH----HHHHHHHHHHHHHHHTTTCCSSSCCCHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH----HHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHH
Confidence            79999999999886554444333    3333333221111    1233456666777754442 2335778888999999


Q ss_pred             HHHHhcCcchhHhHHHHHHhhhcccchhhhcc
Q 023558          218 EELAEKSAPLFLSHFYNIYFSHVAGGQVIERQ  249 (280)
Q Consensus       218 ~ela~~~P~lLVAHaYtRYLGDLSGGQiI~r~  249 (280)
                      .+++...-...++-.+.-+.+=+--|+-+...
T Consensus        91 ~~~a~~~~~~~l~al~pc~~~Y~~~~~~~~~~  122 (180)
T d1wwma1          91 EEMGRLPYAYRVVFFYFLNGLFLEAWAHHVPE  122 (180)
T ss_dssp             HHHHHSCHHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred             HHHhccChHHHHHHHHHHHHHHHHHHHHhccc
Confidence            99886544444555555555555445555544

>d1rcwa_ a.132.1.4 (A:) Hypothetical protein CT610 {Chlamydia trachomatis [TaxId: 813]}

class: All alpha proteins
fold: Heme oxygenase-like
superfamily: Heme oxygenase-like
family: PqqC-like
domain: Hypothetical protein CT610
species: Chlamydia trachomatis [TaxId: 813]

Probab=80.46  E-value=1.3  Score=34.08  Aligned_cols=93  Identities=12%  Similarity=0.069  Sum_probs=53.4

Q ss_pred             CccccCHHHHHHHHHHHHHHHHHHH----HHHHhcCCcc----cccccC---CCccchHHH-HHHHHHHhhcC---CCCC
Q 023558          140 ETWKPSMDAFVKYLVDSQLVFNTIE----RIVDDSNDVA----YAYFRK---TGLERSEGI-SRDLEWFSEQG---IIIP  204 (280)
Q Consensus       140 ~~w~~s~e~Y~~lL~~ly~VY~ALE----~av~~~~dp~----~a~f~~---peL~Rs~aL-ekDL~~f~G~~---~~~p  204 (280)
                      ..+.++.+.|..|+.|.|+.-...=    .++.+..++.    +.....   .+..+-..+ ...+..+ |-+   ....
T Consensus        25 ~~G~l~~e~~~~~~~Q~y~~v~~f~r~la~~~~~~~~~~~~~~l~~~l~~e~~~~~~h~~l~~~~~~~~-g~~~~~~~~~  103 (213)
T d1rcwa_          25 SKGELTKEQLQAYAKDYYLHIKAFPKYLSAIHSRCDDLEARKLLLDNLMDEENGYPNHIDLWKQFVFAL-GVTPEELEAH  103 (213)
T ss_dssp             HTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSSSSCHHHHHHHHHHHT-TCCHHHHHHC
T ss_pred             HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhccccchHHHHHHHHHHc-CCCHHHHhhh
Confidence            5679999999999999987544333    3333333321    111111   122222222 2222222 333   2246


Q ss_pred             CCCchHHHHHHHHHHHHhc-CcchhHhHHH
Q 023558          205 EPSTPGVSYAKYLEELAEK-SAPLFLSHFY  233 (280)
Q Consensus       205 ~P~pat~~Yv~rL~ela~~-~P~lLVAHaY  233 (280)
                      .|+|++.+|++.+..++.. ++...+|..+
T Consensus       104 ~~~p~t~a~~~~~~~~~~~~~~~~~~a~~~  133 (213)
T d1rcwa_         104 EPSEAAKAKVATFMRWCTGDSLAAGVAALY  133 (213)
T ss_dssp             CCCHHHHHHHHHHHHHHTSSCHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHccccHHHHHHHHH
Confidence            7888999999999999875 4556666655