Citrus Sinensis ID: 023610

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Protein Sequence
MGEEREDSQKIKRIAAAAYDYDNDPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYIDPDLVVESMSQPTQASASSTSSATANDRPRQRNSANPGSTTSRSSGTSTNAGSNTTSVRWDRQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSLYGKPRAWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFLRRNFSRSILYRKYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISLLS
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHccccccccHHHHHHHccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccHHHHcccHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHHccccccccHHHHHHHccccccccccHHHHHHHHHHHHHHccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MGEEREDSQKIKRIAAAaydydndprwadywsnilipphmaarsdvVDHYKRKFyqryidpdlvvesmsqptqasasstssatandrprqrnsanpgsttsrssgtstnagsnttsvrwdrqtiQFSVNAWVFVVAMLAIfpliprnlsnRAYRLSFMGTACSSIYSLYslygkprawnMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFLRRNFSRSILYRKYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISLLS
Flexible Loop (DISEMBL)
MGEEREDSQKIKRIAaaaydydndpRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYIDPDLVVESMSQPTQAsasstssatandrprqrnsanpgsttsrssgtstnagsnttsvrwdrQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSLYGKPRAWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFLRRNFSRSILYRKYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISLLS
Low Complexity Region (SEG)
MGEEREDSQKIKRIAAAAYDYDNDPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYIDPDLVVESMSQPTQasasstssataNDRPRQRNSAnpgsttsrssgtstnagsnttsVRWDRQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSLYGKPRAWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFLRRNFSRSILYRKYLEDACVWVESNSTTLSILTSHAEiglgflliislls
Disordered region (IsUnstruct)
************RIAAAAYDYDNDPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYIDPDLVV***************************************************VRWDRQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSLYGKPRAWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFLRRNFSRSILYRKYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISL**
Disordered Region (DISOPRED)
***************AAAYDYDNDPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYIDP*************************************************************TIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSLYGKPRAWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFLRRNFSRSILYRKYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISLLS
Disordered Region (DISEMBL)
**********IKRIAAAAYDYDNDPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYIDPDLVVE*************************************************SVRWDRQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSLYGKPRAWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFLRRNFSRSILYRKYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISLLS
Disordered Region (DISPRO)
*******SQKIKRIAAAAYDYDNDPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYIDPDLVVES************************************************SVRWDRQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSLYGKPRAWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFLRRNFSRSILYRKYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISLLS
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGEEREDSQKIKRIAAAAYDYDNDPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYIDPDLVVESMSQPTQASASSTSSATANDRPRQRNSANPGSTTSRSSGTSTNAGSNTTSVRWDRQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSLYGKPRAWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFLRRNFSRSILYRKYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISLLS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
224127372	345	predicted protein [Populus trichocarpa]	0.985	0.8	0.755	1e-122
224079894	345	predicted protein [Populus trichocarpa]	0.992	0.805	0.75	1e-121
255585937	346	conserved hypothetical protein [Ricinus	0.992	0.803	0.764	1e-120
356545687	347	PREDICTED: uncharacterized protein LOC10	0.985	0.795	0.729	1e-118
297832872	344	hypothetical protein ARALYDRAFT_896208 [	0.985	0.802	0.722	1e-114
18396183	348	uncharacterized protein [Arabidopsis tha	0.985	0.793	0.733	1e-113
358346195	348	hypothetical protein MTR_074s0017 [Medic	0.985	0.793	0.695	1e-112
217075827	348	unknown [Medicago truncatula]	0.985	0.793	0.692	1e-112
388504324	348	unknown [Medicago truncatula]	0.985	0.793	0.692	1e-112
358249008	345	uncharacterized protein LOC100789872 [Gl	0.967	0.785	0.711	1e-111

>gi|224127372|ref|XP_002329261.1| predicted protein [Populus trichocarpa] gi|222870715|gb|EEF07846.1| predicted protein [Populus trichocarpa]

 Score =  443 bits (1139), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 216/286 (75%), Positives = 252/286 (88%), Gaps = 10/286 (3%)

Query: 1   MGEEREDSQKIKRIAAAAYDYDNDPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYID 60
           MGEERED QK+KRIAAAA+DY+NDPRWA+YWSNILIPPH+A+RSDV+DH+KRKFYQRYID
Sbjct: 1   MGEEREDPQKLKRIAAAAFDYENDPRWAEYWSNILIPPHLASRSDVIDHFKRKFYQRYID 60

Query: 61  PDLVVESMS------QPTQASASSTSSATANDRPRQRNSANPGSTTSRSSGTSTNAGSNT 114
           PDLVVE+MS          + +SS+SSA +ND+PR RN+   GSTT R+SG S  AG N 
Sbjct: 61  PDLVVEAMSTNGSSQSTKSSGSSSSSSAPSNDQPRPRNT---GSTT-RTSGPSATAGQNP 116

Query: 115 TSVRWDRQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSLYGK 174
           + VRWDRQTIQFS+NAWVF+VA+LAI PL+P+NLS+RA RLSFMGTACSS+YSLY+L+G+
Sbjct: 117 SPVRWDRQTIQFSINAWVFIVAVLAIIPLVPKNLSSRASRLSFMGTACSSLYSLYALHGR 176

Query: 175 PRAWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFLRRN 234
           PRAWN+Q +Q Y QSIIATKDFIY IYCL+FVTSHLCL+FALIPILCRS+EHVAKFLR N
Sbjct: 177 PRAWNLQGIQAYLQSIIATKDFIYVIYCLTFVTSHLCLRFALIPILCRSLEHVAKFLRSN 236

Query: 235 FSRSILYRKYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISLLS 280
           FSRS LYRKYLED CVWVESN+TTL+IL+SH+EI LGFLLIISLLS
Sbjct: 237 FSRSTLYRKYLEDPCVWVESNTTTLNILSSHSEIALGFLLIISLLS 282

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224079894|ref|XP_002305962.1| predicted protein [Populus trichocarpa] gi|222848926|gb|EEE86473.1| predicted protein [Populus trichocarpa]

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 213/284 (75%), Positives = 243/284 (85%), Gaps = 6/284 (2%)

Query: 1   MGEEREDSQKIKRIAAAAYDYDNDPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYID 60
           MG+E EDSQK +RIAAAAYDYDNDPRWADYWSNILIPPH+++RSDV+DHYKRKFYQRYID
Sbjct: 1   MGQETEDSQKPRRIAAAAYDYDNDPRWADYWSNILIPPHLSSRSDVLDHYKRKFYQRYID 60

Query: 61  PDLVVESMSQPTQASASSTSSATANDRPRQRNSANPGS----TTSRSSGTSTNAGSNTTS 116
           PDLVVE MS  T  S+ ST+ + ++      +   P +    +T+R+SG S  AG N TS
Sbjct: 61  PDLVVEVMS--TNGSSQSTNPSASSSSSSPPSYGEPQTHNTGSTARASGPSATAGQNPTS 118

Query: 117 VRWDRQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSLYGKPR 176
           V W RQTIQFSVNAWVFVVA+LAI PL P+NLS+RAYRLS +GTACSS+YSLY+LYG+PR
Sbjct: 119 VHWYRQTIQFSVNAWVFVVAVLAIIPLAPKNLSSRAYRLSLIGTACSSLYSLYTLYGRPR 178

Query: 177 AWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFLRRNFS 236
           AWN+Q +QVY QSIIATKDFIYFIYCL+FVTSHLCLK ALIPILCRS+EHVAKFLRRNFS
Sbjct: 179 AWNLQGIQVYLQSIIATKDFIYFIYCLTFVTSHLCLKVALIPILCRSLEHVAKFLRRNFS 238

Query: 237 RSILYRKYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISLLS 280
           RS LYRKYLED CVWVESN+TTLSIL+SH EIGLGFLLI+SL S
Sbjct: 239 RSTLYRKYLEDPCVWVESNTTTLSILSSHTEIGLGFLLIVSLFS 282

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585937|ref|XP_002533640.1| conserved hypothetical protein [Ricinus communis] gi|223526469|gb|EEF28743.1| conserved hypothetical protein [Ricinus communis]

 Score =  437 bits (1123), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/285 (76%), Positives = 249/285 (87%), Gaps = 7/285 (2%)

Query: 1   MGEEREDSQKIKRIAAAAYDYDNDPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYID 60
           M EERE++QKIK++AAAAYDY+NDPRWADYWSNILIPPH+A+RSDVVDH+KRKFYQRYID
Sbjct: 1   MAEEREEAQKIKKMAAAAYDYENDPRWADYWSNILIPPHLASRSDVVDHFKRKFYQRYID 60

Query: 61  PDLVVESMSQP-----TQASASSTSSATANDRPRQRNSANPGSTTSRSSGTSTNAGSNTT 115
           P+LVVE+M+       T++S+SS SS T+ND  R RN+ +    +  S+ T  NA  N T
Sbjct: 61  PELVVEAMTSTGSSQPTKSSSSSASSGTSNDHTRSRNTGSAARASGASATTGLNA--NPT 118

Query: 116 SVRWDRQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSLYGKP 175
           SVRWDRQTIQFSVNAWVFVVA+LAI PL+PRNLSNRAYRLSFMGTACSS+YSLY+LYG+P
Sbjct: 119 SVRWDRQTIQFSVNAWVFVVAVLAIIPLVPRNLSNRAYRLSFMGTACSSLYSLYTLYGRP 178

Query: 176 RAWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFLRRNF 235
           RA N+Q LQ YFQSIIATKDFIYFIYCL+FVTSHLCLKFALIPILCR++E VAKFLR NF
Sbjct: 179 RALNLQGLQAYFQSIIATKDFIYFIYCLTFVTSHLCLKFALIPILCRALEQVAKFLRHNF 238

Query: 236 SRSILYRKYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISLLS 280
           SRS LYRKYLED CVWVESN+ TLSIL+SHAEIGLGFLLI+SL S
Sbjct: 239 SRSTLYRKYLEDPCVWVESNTATLSILSSHAEIGLGFLLILSLFS 283

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356545687|ref|XP_003541268.1| PREDICTED: uncharacterized protein LOC100794639 [Glycine max]

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 210/288 (72%), Positives = 243/288 (84%), Gaps = 12/288 (4%)

Query: 1   MGEEREDSQKIKRIAAAAYDYDNDPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYID 60
           MGEERED QK+KR+AA +YDYDND RW DYW+N+LIPPHMA+R DVV H+KRKFYQRY+D
Sbjct: 1   MGEEREDPQKLKRLAADSYDYDNDSRWPDYWNNVLIPPHMASRDDVVSHFKRKFYQRYVD 60

Query: 61  PDLVVESMS------QPTQASASSTSSATANDRPRQRNSANPGSTTSRSSGTSTNAGSNT 114
           PD VVE MS      QP ++S +S+SS   N++PR R+S     +T+R+SGTST AG   
Sbjct: 61  PDFVVEPMSVGGSSSQPVRSSTTSSSSPLTNNQPRARSSG----STNRTSGTSTTAGPGP 116

Query: 115 --TSVRWDRQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSLY 172
             T +RWDRQT+ FSVNAWVFVVA LA  PL+P++LS+RAYRL F+GT CSS+YSLYS Y
Sbjct: 117 SPTPLRWDRQTVLFSVNAWVFVVAFLAAIPLVPKHLSHRAYRLCFLGTLCSSLYSLYSQY 176

Query: 173 GKPRAWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFLR 232
           GKPRAWN QALQVYFQSIIA+KDF+YFIYCL+FVTSHLCLKFALIPILC S EHVAKFLR
Sbjct: 177 GKPRAWNWQALQVYFQSIIASKDFLYFIYCLTFVTSHLCLKFALIPILCWSFEHVAKFLR 236

Query: 233 RNFSRSILYRKYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISLLS 280
           RNFSRS LYRKYLE+ CVWVESNS+TL+I+TSHAEIGLGFLLIISL S
Sbjct: 237 RNFSRSTLYRKYLEEPCVWVESNSSTLNIVTSHAEIGLGFLLIISLFS 284

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297832872|ref|XP_002884318.1| hypothetical protein ARALYDRAFT_896208 [Arabidopsis lyrata subsp. lyrata] gi|297330158|gb|EFH60577.1| hypothetical protein ARALYDRAFT_896208 [Arabidopsis lyrata subsp. lyrata]

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 206/285 (72%), Positives = 245/285 (85%), Gaps = 9/285 (3%)

Query: 1   MGEEREDSQKIKRIAAAAYDYDNDPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYID 60
           M E  ED Q++K+IAAAA+DY+ND RWADYWSNILIPPHMA+R +VVDH+KRKFYQRYID
Sbjct: 1   MAEGGEDPQRLKKIAAAAFDYENDARWADYWSNILIPPHMASRPEVVDHFKRKFYQRYID 60

Query: 61  PDLVVESMSQPTQASA-----SSTSSATANDRPRQRNSANPGSTTSRSSGTSTNAGSNTT 115
           PDLVVE MS  + +S      ++++S+ AN++ R RNS     +  R+SG S   G+N +
Sbjct: 61  PDLVVEPMSTSSSSSQSARPSATSASSNANEQVRSRNSG----SVPRTSGPSATTGANPS 116

Query: 116 SVRWDRQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSLYGKP 175
           S+RWD+QTIQFSVNAWVFV+A+LA+ PLIP+NLSNRAYRLSFMGTACSS+YSLYSLYG+P
Sbjct: 117 SMRWDQQTIQFSVNAWVFVIAVLAVLPLIPKNLSNRAYRLSFMGTACSSLYSLYSLYGRP 176

Query: 176 RAWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFLRRNF 235
           RAWNMQ LQ+YFQSI+A KDFIYFIYCL+FVTSHLCLKFALIPILCR++E VAKFLRRNF
Sbjct: 177 RAWNMQGLQIYFQSIVAAKDFIYFIYCLTFVTSHLCLKFALIPILCRALEQVAKFLRRNF 236

Query: 236 SRSILYRKYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISLLS 280
            RS +YRKYLED CVWVESN+TTL+IL+S AEI +GFLLIISLLS
Sbjct: 237 GRSTIYRKYLEDPCVWVESNTTTLNILSSQAEIAIGFLLIISLLS 281

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18396183|ref|NP_566171.1| uncharacterized protein [Arabidopsis thaliana] gi|14190451|gb|AAK55706.1|AF380625_1 AT3g02420/F16B3_5 [Arabidopsis thaliana] gi|6957705|gb|AAF32449.1| unknown protein [Arabidopsis thaliana] gi|15810093|gb|AAL06972.1| AT3g02420/F16B3_5 [Arabidopsis thaliana] gi|21553733|gb|AAM62826.1| unknown [Arabidopsis thaliana] gi|332640285|gb|AEE73806.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 212/289 (73%), Positives = 246/289 (85%), Gaps = 13/289 (4%)

Query: 1   MGEEREDSQKIKRIAAAAYDYDNDPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYID 60
           M E  EDSQ++K+IAAAA+DY+ND RWADYWSNILIPPHMA+R +VVDH+KRKFYQRYID
Sbjct: 1   MAEGGEDSQRLKKIAAAAFDYENDARWADYWSNILIPPHMASRPEVVDHFKRKFYQRYID 60

Query: 61  PDLVVESM---------SQPTQASASSTSSATANDRPRQRNSANPGSTTSRSSGTSTNAG 111
           PDLVVE M         ++PT  SASST+S+ AN++ R RNS     +  R+SG S   G
Sbjct: 61  PDLVVEPMSTSSSSSQSARPTATSASSTASSNANEQVRSRNSG----SVPRTSGPSATTG 116

Query: 112 SNTTSVRWDRQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSL 171
           +  +S+RWD QTIQFSVNAWVFV+A+LA+ PLIP+NLSNRAYRLSFMGTACSS+YSLYSL
Sbjct: 117 ATPSSMRWDEQTIQFSVNAWVFVIAVLAVLPLIPKNLSNRAYRLSFMGTACSSLYSLYSL 176

Query: 172 YGKPRAWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFL 231
           YG+PRAWNMQ LQVYFQSI+A KDFIYFIYCL+FVTSHLCLKFALIPILCR++E VAKFL
Sbjct: 177 YGRPRAWNMQGLQVYFQSIVAAKDFIYFIYCLTFVTSHLCLKFALIPILCRALEQVAKFL 236

Query: 232 RRNFSRSILYRKYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISLLS 280
           RRNF RS +YRKYLED CVWVESN+TTL+IL+S AEI +GFLLIISLLS
Sbjct: 237 RRNFGRSTIYRKYLEDPCVWVESNTTTLNILSSQAEIAIGFLLIISLLS 285

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358346195|ref|XP_003637156.1| hypothetical protein MTR_074s0017 [Medicago truncatula] gi|355503091|gb|AES84294.1| hypothetical protein MTR_074s0017 [Medicago truncatula]

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/289 (69%), Positives = 237/289 (82%), Gaps = 13/289 (4%)

Query: 1   MGEEREDSQKIKRIAAAAYDYDNDPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYID 60
           MG E+ED QK+KR+AA +YDYD+D RW DYW+N+LIPPHM++R DVV H+KRKFYQRY+D
Sbjct: 1   MGSEKEDPQKLKRLAADSYDYDSDSRWPDYWNNVLIPPHMSSRQDVVSHFKRKFYQRYLD 60

Query: 61  PDLVVESMSQPTQASASSTSSATA--------NDRPRQRNSANPGSTTSRSSGTS-TNAG 111
            DLVVE MS  + +      + ++        ND+ R R++     +T+R+SGTS T+ G
Sbjct: 61  NDLVVEPMSLSSSSQPPRPPATSSSSSPPPRSNDQARARSTG----STNRTSGTSATSVG 116

Query: 112 SNTTSVRWDRQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSL 171
            N   +RWDRQTI FSVNAWV VVA LA  P+IP++LS+RAYRLSFMGT CSS+YSLYS 
Sbjct: 117 PNPAPLRWDRQTILFSVNAWVLVVAFLAAVPIIPKHLSHRAYRLSFMGTTCSSLYSLYSQ 176

Query: 172 YGKPRAWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFL 231
           YGKPRAWNMQALQVYFQSIIATKDFIYF+YCL+FVTSHLCLKFALIPILC S EHVAKFL
Sbjct: 177 YGKPRAWNMQALQVYFQSIIATKDFIYFVYCLTFVTSHLCLKFALIPILCWSFEHVAKFL 236

Query: 232 RRNFSRSILYRKYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISLLS 280
           RRNFSRS LYRKYLE+ CVWVESN+TTL+ILTSHAEIGLGFLL++SL S
Sbjct: 237 RRNFSRSTLYRKYLEEPCVWVESNNTTLNILTSHAEIGLGFLLVLSLFS 285

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217075827|gb|ACJ86273.1| unknown [Medicago truncatula]

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 200/289 (69%), Positives = 236/289 (81%), Gaps = 13/289 (4%)

Query: 1   MGEEREDSQKIKRIAAAAYDYDNDPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYID 60
           MG E+ED QK+KR+AA +YDYD+D RW DYW+N+LIPPHM++R DVV H+KRKFYQ Y+D
Sbjct: 1   MGSEKEDPQKLKRLAADSYDYDSDSRWPDYWNNVLIPPHMSSRQDVVSHFKRKFYQHYLD 60

Query: 61  PDLVVESMSQPTQASASSTSSATA--------NDRPRQRNSANPGSTTSRSSGTS-TNAG 111
            DLVVE MS  + +      + ++        ND+ R R++     +T+R+SGTS T+ G
Sbjct: 61  NDLVVEPMSLSSSSQPPRPPATSSSSSPPPRSNDQARARSTG----STNRTSGTSATSVG 116

Query: 112 SNTTSVRWDRQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSL 171
            N   +RWDRQTI FSVNAWV VVA LA  P+IP++LS+RAYRLSFMGT CSS+YSLYS 
Sbjct: 117 PNPAPLRWDRQTILFSVNAWVLVVAFLAAVPIIPKHLSHRAYRLSFMGTTCSSLYSLYSQ 176

Query: 172 YGKPRAWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFL 231
           YGKPRAWNMQALQVYFQSIIATKDFIYF+YCL+FVTSHLCLKFALIPILC S EHVAKFL
Sbjct: 177 YGKPRAWNMQALQVYFQSIIATKDFIYFVYCLTFVTSHLCLKFALIPILCWSFEHVAKFL 236

Query: 232 RRNFSRSILYRKYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISLLS 280
           RRNFSRS LYRKYLE+ CVWVESN+TTL+ILTSHAEIGLGFLL++SL S
Sbjct: 237 RRNFSRSTLYRKYLEEPCVWVESNNTTLNILTSHAEIGLGFLLVLSLFS 285

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388504324|gb|AFK40228.1| unknown [Medicago truncatula]

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 200/289 (69%), Positives = 236/289 (81%), Gaps = 13/289 (4%)

Query: 1   MGEEREDSQKIKRIAAAAYDYDNDPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYID 60
           MG E+ED QK+KR+AA +YDYD+D RW DYW+N+LIPPHM++R DVV H+KRKFYQ Y+D
Sbjct: 1   MGSEKEDPQKLKRLAADSYDYDSDSRWPDYWNNVLIPPHMSSRQDVVSHFKRKFYQHYLD 60

Query: 61  PDLVVESMSQPTQASASSTSSATA--------NDRPRQRNSANPGSTTSRSSGTS-TNAG 111
            DLVVE MS  + +      + ++        ND+ R R++     +T+R+SGTS T+ G
Sbjct: 61  NDLVVEPMSLSSSSQPPRPPATSSSSSPPPRSNDQARARSTG----STNRTSGTSATSVG 116

Query: 112 SNTTSVRWDRQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSL 171
            N   +RWDRQTI FSVNAWV VVA LA  P+IP++LS+RAYRLSFMGT CSS+YSLYS 
Sbjct: 117 PNPAPLRWDRQTILFSVNAWVLVVAFLAAVPIIPKHLSHRAYRLSFMGTTCSSLYSLYSQ 176

Query: 172 YGKPRAWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFL 231
           YGKPRAWNMQALQVYFQSIIATKDFIYF+YCL+FVTSHLCLKFALIPILC S EHVAKFL
Sbjct: 177 YGKPRAWNMQALQVYFQSIIATKDFIYFVYCLTFVTSHLCLKFALIPILCWSFEHVAKFL 236

Query: 232 RRNFSRSILYRKYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISLLS 280
           RRNFSRS LYRKYLE+ CVWVESN+TTL+ILTSHAEIGLGFLL++SL S
Sbjct: 237 RRNFSRSTLYRKYLEEPCVWVESNNTTLNILTSHAEIGLGFLLVLSLFS 285

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249008|ref|NP_001240233.1| uncharacterized protein LOC100789872 [Glycine max] gi|255646034|gb|ACU23504.1| unknown [Glycine max]

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 202/284 (71%), Positives = 235/284 (82%), Gaps = 13/284 (4%)

Query: 6   EDSQKIKRIAAAAYDYDNDPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYIDPDLVV 65
           ED QK+KR+AA +YDYDND RW  YW+N+LIPPHMA+R DVV H+KRKFYQRY+DPDLVV
Sbjct: 3   EDPQKLKRLAADSYDYDNDSRWPGYWNNVLIPPHMASRDDVVSHFKRKFYQRYVDPDLVV 62

Query: 66  ESMS-------QPTQASASSTSSATANDRPRQRNSANPGSTTSRSSGTSTNAGSNT--TS 116
           E MS           ++ SS+SS   N++PR R+S     +T+R+SGTST AG     T 
Sbjct: 63  EPMSVGGSSSQPTRSSTTSSSSSPPTNNQPRARSSG----STNRTSGTSTTAGPGPSPTP 118

Query: 117 VRWDRQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSLYGKPR 176
           +RWDRQT+ FSV AWVFVVA LA  PL+P++LS+RAYRL F+GT CSS+YSLYS YGKPR
Sbjct: 119 LRWDRQTVLFSVYAWVFVVAFLAAIPLVPKHLSHRAYRLCFLGTLCSSLYSLYSQYGKPR 178

Query: 177 AWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFLRRNFS 236
           AWN+QALQVYFQSI+A+KDFIYFIYCL+FVTSHLCLKFALIPILC S EHVAKFLRRNFS
Sbjct: 179 AWNLQALQVYFQSIVASKDFIYFIYCLTFVTSHLCLKFALIPILCWSFEHVAKFLRRNFS 238

Query: 237 RSILYRKYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISLLS 280
           RS LYRKYLE+ CVWVESN++TL+ILTSHAEIGLGFLLIISL S
Sbjct: 239 RSTLYRKYLEEPCVWVESNNSTLNILTSHAEIGLGFLLIISLFS 282

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	280
TAIR|locus:2076874	348	AT3G02420 "AT3G02420" [Arabido	0.939	0.755	0.684	3.4e-100

TAIR|locus:2076874 AT3G02420 "AT3G02420" [Arabidopsis thaliana (taxid:3702)]

 Score = 994 (355.0 bits), Expect = 3.4e-100, P = 3.4e-100
 Identities = 189/276 (68%), Positives = 215/276 (77%)

Query:     1 MGEEREDSQKIKRIAAAAYDYDNDPRWADYWSNILIPPHMAARSDVVDHYKRKFYQRYID 60
             M E  EDSQ++K+IAAAA+DY+ND RWADYWSNILIPPHMA+R +VVDH+KRKFYQRYID
Sbjct:     1 MAEGGEDSQRLKKIAAAAFDYENDARWADYWSNILIPPHMASRPEVVDHFKRKFYQRYID 60

Query:    61 PDLVVESMS---------QPTQXXXXXXXXXXXNDRPRQRNSAXXXXXXXXXXXXXXXXX 111
             PDLVVE MS         +PT            N++ R RNS                  
Sbjct:    61 PDLVVEPMSTSSSSSQSARPTATSASSTASSNANEQVRSRNSGSVPRTSGPSATTGATPS 120

Query:   112 XXXXXVRWDRQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSL 171
                  +RWD QTIQFSVNAWVFV+A+LA+ PLIP+NLSNRAYRLSFMGTACSS+YSLYSL
Sbjct:   121 S----MRWDEQTIQFSVNAWVFVIAVLAVLPLIPKNLSNRAYRLSFMGTACSSLYSLYSL 176

Query:   172 YGKPRAWNMQALQVYFQSIIATKDFIYFIYCLSFVTSHLCLKFALIPILCRSVEHVAKFL 231
             YG+PRAWNMQ LQVYFQSI+A KDFIYFIYCL+FVTSHLCLKFALIPILCR++E VAKFL
Sbjct:   177 YGRPRAWNMQGLQVYFQSIVAAKDFIYFIYCLTFVTSHLCLKFALIPILCRALEQVAKFL 236

Query:   232 RRNFSRSILYRKYLEDACVWVESNSTTLSILTSHAE 267
             RRNF RS +YRKYLED CVWVESN+TTL+IL+S AE
Sbjct:   237 RRNFGRSTIYRKYLEDPCVWVESNTTTLNILSSQAE 272


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.135   0.425    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      280       234   0.00087  113 3  11 22  0.46    32
                                                     32  0.43    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  207 KB (2115 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.10u 0.13s 18.23t   Elapsed:  00:00:01
  Total cpu time:  18.10u 0.13s 18.23t   Elapsed:  00:00:01
  Start:  Fri May 10 11:01:05 2013   End:  Fri May 10 11:01:06 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	280
PF03661	247	UPF0121: Uncharacterised protein family (UPF0121);	100.0
KOG4002	264	consensus Uncharacterized integral membrane protei	99.78

>PF03661 UPF0121: Uncharacterised protein family (UPF0121); InterPro: IPR005344 Uncharacterised integral membrane protein family

Probab=100.00  E-value=3.8e-34  Score=261.80  Aligned_cols=154  Identities=26%  Similarity=0.387  Sum_probs=135.8

Q ss_pred             cchhhHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhHhhHHHHHHHhccCchHHHH
Q 023610          121 RQTIQFSVNAWVFVVAMLAIFPLIPRNLSNRAYRLSFMGTACSSIYSLYSLYGKPRAWNMQALQVYFQSIIATKDFIYFI  200 (280)
Q Consensus       121 ~~~~~f~~~awvlv~a~l~ilPl~p~~~~~r~Yr~a~lgaa~S~gi~lyq~~g~p~~~n~~~~~~~lq~ll~den~qYLl  200 (280)
                      -++..|..++|+++++++|++|+++.+..+++||.+++|++++|||+|||+++++++     .++|+++++.|||+|||+
T Consensus        24 lq~~~f~~~~~~l~~~~~y~l~~~~~~~~~~~Y~~all~~a~t~~i~l~q~~~~~~~-----~~~~l~~ll~ddn~~YL~   98 (247)
T PF03661_consen   24 LQFAWFLGHVFTLLCSLLYILPILFFSLAYSAYRKALLGAAATYAIVLYQRLPRFQF-----SRAYLQRLLLDDNFQYLL   98 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHhcccccc-----cHHHHHHHHhcCcHHHHH
Confidence            378899999999999999999987666677799999999999999999999987665     467999999999999999


Q ss_pred             HHHHHHhhcccceehhhhHHHHHHHHHHHHHHHhccccHHH-HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Q 023610          201 YCLSFVTSHLCLKFALIPILCRSVEHVAKFLRRNFSRSILY-RKYLEDACVWVESNSTTLSILTSHAEIGLGFLLIISLL  279 (280)
Q Consensus       201 ~slifl~s~~p~~laLlP~~ifSlfHvatf~r~~l~~~~~~-~k~~~~~~~fV~~n~~~~m~lvA~~EI~l~~~LIl~lf  279 (280)
                      ||++|++++ |++++|+|+++||+||+++|+|+++.+.... ....+.+++||++|++++|+++|++||++++++|+++|
T Consensus        99 ~al~fl~~~-p~~~~llP~~lfSlfHv~ty~~~~l~~~~~~~~~~~~~i~~~v~~~~~~~m~~~A~~Ei~l~~~li~~lf  177 (247)
T PF03661_consen   99 YALIFLFSP-PITLALLPFFLFSLFHVATYLRKLLPPTGPNSSPLARSIISFVKQNNDKIMRLVANIEIFLLPLLIFMLF  177 (247)
T ss_pred             HHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999997 8999999999999999999999976542211 12333477899999999999999999999999999887


Q ss_pred             C
Q 023610          280 S  280 (280)
Q Consensus       280 s  280 (280)
                      +
T Consensus       178 ~  178 (247)
T PF03661_consen  178 F  178 (247)
T ss_pred             H
Confidence            4

; GO: 0016021 integral to membrane

>KOG4002 consensus Uncharacterized integral membrane protein [Function unknown]

Probab=99.78  E-value=2.1e-18  Score=157.48  Aligned_cols=145  Identities=19%  Similarity=0.305  Sum_probs=114.5

Q ss_pred             hhhHHHHHHHHHHHHHHHhcCCCc--chhHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhHhhHHHHHHHhccCchHHHH
Q 023610          123 TIQFSVNAWVFVVAMLAIFPLIPR--NLSNRAYRLSFMGTACSSIYSLYSLYGKPRAWNMQALQVYFQSIIATKDFIYFI  200 (280)
Q Consensus       123 ~~~f~~~awvlv~a~l~ilPl~p~--~~~~r~Yr~a~lgaa~S~gi~lyq~~g~p~~~n~~~~~~~lq~ll~den~qYLl  200 (280)
                      .+++..-.-++-+++.|++|+...  ..++|.    ++..+.+++++++++...-. +    ++.++.+++.||||||++
T Consensus        40 s~L~alr~~~fy~s~~y~~~~~~f~~~~~~~~----~l~na~t~al~l~qr~~~~~-l----~~~f~arli~eds~~Ylv  110 (264)
T KOG4002|consen   40 SVLYALRLSTFYFSVTYLIPLYGFGKIASQKF----FLANAATSALRLHQRLAMFA-L----NKLFLARLIIEDSVHYLV  110 (264)
T ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH----HHHHhHhhhhhHHHHHhHHH-H----HHHHHHHHHHccchHHHH
Confidence            445555556666778888887522  234455    88899999999999985332 2    556899999999999999


Q ss_pred             HHHHHHhhcccceehhhhHHHHHHHHHHHHHHHhcc---c--cHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHH
Q 023610          201 YCLSFVTSHLCLKFALIPILCRSVEHVAKFLRRNFS---R--SILYRKYLEDACVWVESNS-TTLSILTSHAEIGLGFLL  274 (280)
Q Consensus       201 ~slifl~s~~p~~laLlP~~ifSlfHvatf~r~~l~---~--~~~~~k~~~~~~~fV~~n~-~~~m~lvA~~EI~l~~~L  274 (280)
                      |+++|++.+ |+.+.|+|+++|+++|+++|+++.+.   .  ++..+..+++   |+.+++ +++|.++|+.||++++++
T Consensus       111 ~slifl~~~-p~~~sL~P~l~ya~lH~~ty~~kvL~~~~~ns~~~~~s~i~~---f~~q~~~q~~l~~va~~eifll~~l  186 (264)
T KOG4002|consen  111 YSLIFLFLR-PFSFSLLPVLIYAVLHASTYLNKVLLVIGQNSSGFFLSMISK---FEAQYTLQNALKLVAFNEIFLLPRL  186 (264)
T ss_pred             HHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHH---HHHHhhhhHHHHHHHHHHHHHHHHH
Confidence            999999998 99999999999999999999998654   2  3444444444   455554 999999999999999999


Q ss_pred             HHHhcC
Q 023610          275 IISLLS  280 (280)
Q Consensus       275 Il~lfs  280 (280)
                      +.++|+
T Consensus       187 ~~~iF~  192 (264)
T KOG4002|consen  187 FFLIFS  192 (264)
T ss_pred             HHHHHh
Confidence            999874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	280
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 3e-04
 Identities = 42/208 (20%), Positives = 66/208 (31%), Gaps = 88/208 (42%)

Query: 118 RWDR----------QTIQFSVNAW-------VFVVAMLAIFP---LIP------------ 145
            WD             I+ S+N         +F    L++FP    IP            
Sbjct: 343 TWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFD--RLSVFPPSAHIPTILLSLIWFDVI 400

Query: 146 ----RNLSNRAYRLSFM-GTACSSIYSLYSLY--GKPRAWNMQALQVYFQSIIA------ 192
                 + N+ ++ S +      S  S+ S+Y   K +  N  AL    +SI+       
Sbjct: 401 KSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH---RSIVDHYNIPK 457

Query: 193 ---TKDFI------YFIYCLSFVTSHLCL-----KFALIPILCRSVEHVAKFLRR----- 233
              + D I      YF Y  S +  HL       +  L  ++        +FL +     
Sbjct: 458 TFDSDDLIPPYLDQYF-Y--SHIGHHLKNIEHPERMTLFRMVFLDF----RFLEQKIRHD 510

Query: 234 ----NFSRSIL--------YRKYLEDAC 249
               N S SIL        Y+ Y+ D  
Sbjct: 511 STAWNASGSILNTLQQLKFYKPYICDND 538

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00