Citrus Sinensis ID: 023774

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------
Protein Sequence
MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRGQPSDGISKVVFGGQVTDEEVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGISHISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPPPEILPRPAPAGDQSSISSTEEPVMKTSKKIYDKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIALV
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccHHHHHHHHccccccccccEEEEccccccccccccccccccccccccccccccEEccccccccEEEccccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHcHcccccccccccccccccccccccccccccccEEEEcccccHHHHHHHHccccccccHHHHcccccEEcccccccccccccccccccccccEEEEEccccccEEEEEcccccccccccccHHHHHHHHHHccccccccHHHHHHHHHHccHHHcccccccccccccccccccccccccEcccccccEccccEccccHHHHHccccccccccccccccccccHccHHHcccccccccccccccccccccccccccccEEEEc
Coil and Loop (DISEMBL)
merstpvrkphtstadllvwsetppsdspaqasstrssvrgqpsdgiskvvfggqvtDEEVEslnrrkpcsgykmkemtgsgifaagaendesesgsanptpnnktgLRMYQQAIAGIshisfgeedsispkkpttlpevakqrelsgtlesESEAKLKKQISDAkskelsghdifapppeilprpapagdqssissteepvmktSKKIYDKkfselsgndifkgdvppssaekplSVAKLREMsgsnifadgkvesrdylggvrkppggessialv
Flexible Loop (DISEMBL)
merstpvrkphtstadllvwsetppsdspaqasstrssvrgqpsdgiskvvfggqvtdeeveslnrrkpcsgykmKEMTGSGIFAAGaendesesgsanpTPNNKTGLRMYQQAIAGISHISfgeedsispkkpttlpevakqrelsgtleseseaKLKKQISDAKSKELSGHDIFAPPPEILPRPAPAGDQssissteepvmktSKKIYDKkfselsgndifkgdvppssaEKPLSVAKLREmsgsnifadgkvesrdylggvrkppggessialv
Low Complexity Region (SEG)
MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRGQPSDGISKVVFGGQVTDEEVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGISHISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFapppeilprpapaGDQSSISSTEEPVMKTSKKIYDKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIALV
Disordered region (IsUnstruct)
**************************************************************************************************************YQQAIAGISH*************************************************************************************************************************************************************
Disordered Region (DISOPRED)
*****PV*KPHTSTADLLV**********************************************************MTGSGIFA************************MYQQAIAGI***************************************************LSGHDIFA***********************************KFSELSGNDI**************************IFADGKV******************IALV
Disordered Region (DISEMBL)
*************TADLLVWSE*********************SDGISKVVFGGQVTDEEVESLNRRKPCSGYKMKEMTGSGIFAAGA************TPNNKTGLRMYQQAIAGISHISFGEEDSISPKKP**********************************ELSGHDIFAPPPEILPRP*****************KTSKKIYDKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKP**********
Disordered Region (DISPRO)
*********************************************GISKVVFGGQVTDEEVESLNRRKPCSGYKMKEMT***IFA*******************KTGLRMYQQAIAGISHISFGEEDSISPKKPTTLPEVAKQRELS*T*ES*S*****K*IS*AKS**LSGHDIFAPPP*******************EPVMKTSKKIYDKKFSELSGNDIFK************************************LGGVRKPPGGESSI*L*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRGQPSDGISKVVFGGQVTDEEVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGISHISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPPPEILPRPAPAGDQSSISSTEEPVMKTSKKIYDKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIALV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	277
224063217	294	predicted protein [Populus trichocarpa]	0.989	0.931	0.787	1e-127
255545698	1204	conserved hypothetical protein [Ricinus	0.985	0.226	0.775	1e-125
224084676	294	predicted protein [Populus trichocarpa]	0.989	0.931	0.774	1e-123
225459324	295	PREDICTED: uncharacterized protein LOC10	0.989	0.928	0.741	1e-118
449450494	291	PREDICTED: uncharacterized protein LOC10	0.996	0.948	0.756	1e-118
225459322	304	PREDICTED: uncharacterized protein LOC10	0.989	0.901	0.719	1e-117
225459326	286	PREDICTED: uncharacterized protein LOC10	0.989	0.958	0.747	1e-115
358249210	280	uncharacterized protein LOC100818758 [Gl	0.963	0.953	0.762	1e-113
217073902	288	unknown [Medicago truncatula]	0.981	0.944	0.744	1e-112
388510830	288	unknown [Medicago truncatula]	0.981	0.944	0.737	1e-112

>gi|224063217|ref|XP_002301046.1| predicted protein [Populus trichocarpa] gi|118481505|gb|ABK92695.1| unknown [Populus trichocarpa] gi|222842772|gb|EEE80319.1| predicted protein [Populus trichocarpa]

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 234/297 (78%), Positives = 255/297 (85%), Gaps = 23/297 (7%)

Query: 1   MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRGQPSDGISKVVFGGQVTDEE 60
           MERSTPVRKPHTSTADLL WSETPP DSPA  S++RS+   QPSDGISKVVFGGQVT+EE
Sbjct: 1   MERSTPVRKPHTSTADLLTWSETPPPDSPAVGSASRSTRPHQPSDGISKVVFGGQVTEEE 60

Query: 61  VESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGISH 120
            ESLN+RKPCSGYKMKEMTGSGIFAA  END +ESGSANPT N+KTGLRMYQQAIAGISH
Sbjct: 61  FESLNKRKPCSGYKMKEMTGSGIFAANGENDLAESGSANPTANSKTGLRMYQQAIAGISH 120

Query: 121 ISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPPP 180
           ISF EE+S+SPKKPTTLPEVAKQRELSGTLESES+A LKKQIS AKSKELSGHDIFAPPP
Sbjct: 121 ISFAEEESVSPKKPTTLPEVAKQRELSGTLESESDAMLKKQISTAKSKELSGHDIFAPPP 180

Query: 181 EILPRPA--------------------PAGDQSSISSTEEPVMKTSKKIYDKKFSELSGN 220
           EILPRP                     PAGDQ    S+EE V+KT+KKIY++KF+ELSGN
Sbjct: 181 EILPRPTTVRALALQESIQLGEPSPRNPAGDQ---MSSEESVVKTAKKIYNQKFNELSGN 237

Query: 221 DIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIALV 277
           ++FKGD PPS+AEKPLSVAKLREMSGS+IF+DGKVESRDYLGGVRKPPGGESSIALV
Sbjct: 238 NVFKGDAPPSTAEKPLSVAKLREMSGSDIFSDGKVESRDYLGGVRKPPGGESSIALV 294

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545698|ref|XP_002513909.1| conserved hypothetical protein [Ricinus communis] gi|223546995|gb|EEF48492.1| conserved hypothetical protein [Ricinus communis]

 Score =  453 bits (1166), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 232/299 (77%), Positives = 250/299 (83%), Gaps = 26/299 (8%)

Query: 1   MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRG-QPSDGISKVVFGGQVTDE 59
           MER+TPVRKPHTSTADLL WSE PP+DSPA  S+ RS+ R  QPSDGISKVVFGGQVTDE
Sbjct: 1   MERTTPVRKPHTSTADLLTWSEIPPADSPAVGSAPRSAARSHQPSDGISKVVFGGQVTDE 60

Query: 60  EVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGIS 119
           E E+LN+RKPCSGYKMKEMTGSGIF A  END SESG AN TPN++TGLRMYQQA+AGIS
Sbjct: 61  EAENLNKRKPCSGYKMKEMTGSGIFVANGENDPSESGGANATPNSRTGLRMYQQALAGIS 120

Query: 120 HISFGEEDSISPKKPTTLPEVAKQRELSGTLESES--EAKLKKQISDAKSKELSGHDIFA 177
           HISF EE+S+SPKKPTTLPEVAKQRELSGTLESE+  EAKLKKQ+SDAK KELSGHDIFA
Sbjct: 121 HISFAEEESVSPKKPTTLPEVAKQRELSGTLESEAEREAKLKKQLSDAKCKELSGHDIFA 180

Query: 178 PPPEILPRPA--------------------PAGDQSSISSTEEPVMKTSKKIYDKKFSEL 217
           PPPEILPRP                     PAG Q    ST EPVMKT+KKIYDKKF+EL
Sbjct: 181 PPPEILPRPTTVRALALKESIELGEPAPHDPAGGQ---LSTGEPVMKTAKKIYDKKFNEL 237

Query: 218 SGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIAL 276
           SGNDIFKGDVPPSSAEK LSVAKLRE+SG++IFADGK E RDYLGGVRKPPGGESSIAL
Sbjct: 238 SGNDIFKGDVPPSSAEKSLSVAKLREISGNDIFADGKAEHRDYLGGVRKPPGGESSIAL 296

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224084676|ref|XP_002307384.1| predicted protein [Populus trichocarpa] gi|222856833|gb|EEE94380.1| predicted protein [Populus trichocarpa]

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 230/297 (77%), Positives = 250/297 (84%), Gaps = 23/297 (7%)

Query: 1   MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRGQPSDGISKVVFGGQVTDEE 60
           MERSTPVRKPHTSTADLL WSETPP DSP+  S+ R +   QPSDGISKVVFGGQVT+EE
Sbjct: 1   MERSTPVRKPHTSTADLLTWSETPPPDSPSVGSAPRPTRSHQPSDGISKVVFGGQVTEEE 60

Query: 61  VESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGISH 120
            ESLN+RKPCSGYKMKEMTGSGIFAA  E+D +ESGSANP PN+KTGLRMYQQAIAGISH
Sbjct: 61  FESLNKRKPCSGYKMKEMTGSGIFAANGEDDTAESGSANPIPNSKTGLRMYQQAIAGISH 120

Query: 121 ISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPPP 180
           ISF E+DS+SPKKPTTLPEVAKQRELSGTLESES+AKLKKQIS AKSKELSGHDIFAPPP
Sbjct: 121 ISFAEDDSVSPKKPTTLPEVAKQRELSGTLESESDAKLKKQISGAKSKELSGHDIFAPPP 180

Query: 181 EILPRPA--------------------PAGDQSSISSTEEPVMKTSKKIYDKKFSELSGN 220
           EILPRP                     P G Q     +EE V+KT+KKI ++KF+ELSGN
Sbjct: 181 EILPRPTTVRALALQESIQLGEPSPHDPVGGQ---QPSEESVVKTAKKINNQKFNELSGN 237

Query: 221 DIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIALV 277
           DIFKGD PPSSAEKPLSVAKLREMSG++IFADGKVESRD+LGGVRKPPGGESSIALV
Sbjct: 238 DIFKGDAPPSSAEKPLSVAKLREMSGNDIFADGKVESRDFLGGVRKPPGGESSIALV 294

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459324|ref|XP_002285796.1| PREDICTED: uncharacterized protein LOC100260886 isoform 1 [Vitis vinifera] gi|147861247|emb|CAN81471.1| hypothetical protein VITISV_020507 [Vitis vinifera] gi|302141947|emb|CBI19150.3| unnamed protein product [Vitis vinifera]

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 221/298 (74%), Positives = 250/298 (83%), Gaps = 24/298 (8%)

Query: 1   MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRG-QPSDGISKVVFGGQVTDE 59
           ME++TPVRKPHTSTADLL WSETPP+DSPA AS  R +VR  QPSDGISKVVFGGQVTDE
Sbjct: 1   MEKATPVRKPHTSTADLLTWSETPPADSPASAS--RPAVRSHQPSDGISKVVFGGQVTDE 58

Query: 60  EVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGIS 119
           E E+L++RKPCSGYK+KE+TGSGIFA   EN  SESGSANPTPNNKT +R+YQQA A IS
Sbjct: 59  EAEALSKRKPCSGYKLKEITGSGIFALEGENGTSESGSANPTPNNKTTVRIYQQAAAAIS 118

Query: 120 HISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPP 179
            ISFG E+S+SPKKPTTLPEVAKQRELSGTLESE E K++KQ+SDAK KELSGHDIFAPP
Sbjct: 119 QISFGTEESVSPKKPTTLPEVAKQRELSGTLESE-ETKMQKQLSDAKCKELSGHDIFAPP 177

Query: 180 PEILPRPA--------------------PAGDQSSISSTEEPVMKTSKKIYDKKFSELSG 219
           PEILPRP+                    PAG QS+I  ++E V+KT+KKI+++KF EL+G
Sbjct: 178 PEILPRPSAARSLVLKESKDMGEPAPRNPAGGQSNIMFSDETVLKTAKKIHNQKFVELTG 237

Query: 220 NDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIALV 277
           NDIFKGDVPPSSAEK LS+AKLREMSG++IFADGK ESRDYLGGVRKPPGGESSIALV
Sbjct: 238 NDIFKGDVPPSSAEKSLSMAKLREMSGNDIFADGKAESRDYLGGVRKPPGGESSIALV 295

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450494|ref|XP_004142997.1| PREDICTED: uncharacterized protein LOC101215119 [Cucumis sativus] gi|449531599|ref|XP_004172773.1| PREDICTED: uncharacterized protein LOC101227622 [Cucumis sativus]

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 221/292 (75%), Positives = 244/292 (83%), Gaps = 16/292 (5%)

Query: 1   MERSTPVRKPHTSTADLLVWSETPPSDSPA--QASSTRSSVRGQPSDGISKVVFGGQVTD 58
           M+R+TPVRKPHTSTADLL W E PP+DSPA   ++S  +    QPSDGISKVVFGGQVTD
Sbjct: 1   MDRTTPVRKPHTSTADLLTWPELPPADSPALPSSASRSAPRSHQPSDGISKVVFGGQVTD 60

Query: 59  EEVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGI 118
           EEVESLN+RKPCSGYKMKEMTGSGIF     ++E ESGSANP+  NKTG+RMYQQ +AGI
Sbjct: 61  EEVESLNKRKPCSGYKMKEMTGSGIFVGNEGDEELESGSANPS-QNKTGIRMYQQTLAGI 119

Query: 119 SHISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAP 178
           SHISFGEE S+SPKKPTT+PEVAKQRELSG LES+++AKLKKQ+SDAK KELSGHDIFAP
Sbjct: 120 SHISFGEEGSVSPKKPTTVPEVAKQRELSGNLESDADAKLKKQLSDAKCKELSGHDIFAP 179

Query: 179 PPEILPRPAPAG-------------DQSSISSTEEPVMKTSKKIYDKKFSELSGNDIFKG 225
           PPEILPRP  A              D   I   EEP +KT+KKIYDKKFSELSGNDIFKG
Sbjct: 180 PPEILPRPTTARTLDLKGSIEIGEPDSRGIIPGEEPSVKTAKKIYDKKFSELSGNDIFKG 239

Query: 226 DVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIALV 277
           DVPPSS EKPLSVAKLREMSG++IFADGKVE+RDYLGGVRKPPGGESSIALV
Sbjct: 240 DVPPSSTEKPLSVAKLREMSGNDIFADGKVETRDYLGGVRKPPGGESSIALV 291

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459322|ref|XP_002285797.1| PREDICTED: uncharacterized protein LOC100260886 isoform 2 [Vitis vinifera]

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 221/307 (71%), Positives = 250/307 (81%), Gaps = 33/307 (10%)

Query: 1   MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRG-QPSDGISKVVFGGQVTDE 59
           ME++TPVRKPHTSTADLL WSETPP+DSPA AS  R +VR  QPSDGISKVVFGGQVTDE
Sbjct: 1   MEKATPVRKPHTSTADLLTWSETPPADSPASAS--RPAVRSHQPSDGISKVVFGGQVTDE 58

Query: 60  EVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGIS 119
           E E+L++RKPCSGYK+KE+TGSGIFA   EN  SESGSANPTPNNKT +R+YQQA A IS
Sbjct: 59  EAEALSKRKPCSGYKLKEITGSGIFALEGENGTSESGSANPTPNNKTTVRIYQQAAAAIS 118

Query: 120 HISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPP 179
            ISFG E+S+SPKKPTTLPEVAKQRELSGTLESE E K++KQ+SDAK KELSGHDIFAPP
Sbjct: 119 QISFGTEESVSPKKPTTLPEVAKQRELSGTLESE-ETKMQKQLSDAKCKELSGHDIFAPP 177

Query: 180 PEILPRPA-----------------------------PAGDQSSISSTEEPVMKTSKKIY 210
           PEILPRP+                             PAG QS+I  ++E V+KT+KKI+
Sbjct: 178 PEILPRPSAARSLVLKESKDMGEPAPRNVRTSVKVSNPAGGQSNIMFSDETVLKTAKKIH 237

Query: 211 DKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGG 270
           ++KF EL+GNDIFKGDVPPSSAEK LS+AKLREMSG++IFADGK ESRDYLGGVRKPPGG
Sbjct: 238 NQKFVELTGNDIFKGDVPPSSAEKSLSMAKLREMSGNDIFADGKAESRDYLGGVRKPPGG 297

Query: 271 ESSIALV 277
           ESSIALV
Sbjct: 298 ESSIALV 304

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225459326|ref|XP_002285798.1| PREDICTED: uncharacterized protein LOC100260886 isoform 3 [Vitis vinifera]

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 216/289 (74%), Positives = 245/289 (84%), Gaps = 15/289 (5%)

Query: 1   MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRG-QPSDGISKVVFGGQVTDE 59
           ME++TPVRKPHTSTADLL WSETPP+DSPA AS  R +VR  QPSDGISKVVFGGQVTDE
Sbjct: 1   MEKATPVRKPHTSTADLLTWSETPPADSPASAS--RPAVRSHQPSDGISKVVFGGQVTDE 58

Query: 60  EVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGIS 119
           E E+L++RKPCSGYK+KE+TGSGIFA   EN  SESGSANPTPNNKT +R+YQQA A IS
Sbjct: 59  EAEALSKRKPCSGYKLKEITGSGIFALEGENGTSESGSANPTPNNKTTVRIYQQAAAAIS 118

Query: 120 HISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPP 179
            ISFG E+S+SPKKPTTLPEVAKQRELSGTLESE E K++KQ+SDAK KELSGHDIFAPP
Sbjct: 119 QISFGTEESVSPKKPTTLPEVAKQRELSGTLESE-ETKMQKQLSDAKCKELSGHDIFAPP 177

Query: 180 PEILPRPAPA-----------GDQSSISSTEEPVMKTSKKIYDKKFSELSGNDIFKGDVP 228
           PEILPRP+ A           G+ +  +     V+KT+KKI+++KF EL+GNDIFKGDVP
Sbjct: 178 PEILPRPSAARSLVLKESKDMGEPAPRNVRTSTVLKTAKKIHNQKFVELTGNDIFKGDVP 237

Query: 229 PSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIALV 277
           PSSAEK LS+AKLREMSG++IFADGK ESRDYLGGVRKPPGGESSIALV
Sbjct: 238 PSSAEKSLSMAKLREMSGNDIFADGKAESRDYLGGVRKPPGGESSIALV 286

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249210|ref|NP_001240011.1| uncharacterized protein LOC100818758 [Glycine max] gi|255642413|gb|ACU21470.1| unknown [Glycine max]

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 221/290 (76%), Positives = 236/290 (81%), Gaps = 23/290 (7%)

Query: 1   MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRGQPSDGISKVVFGGQVTDEE 60
           MERS PVRKPHTSTADLL W ETP SDSPA  SS   S   QPSDGI KVVFGGQVTDEE
Sbjct: 1   MERSNPVRKPHTSTADLLTWPETPISDSPAPPSSAVRS--HQPSDGIRKVVFGGQVTDEE 58

Query: 61  VESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGISH 120
           VESLN+RKPCS YKMKE+TGSGIF A  E+D SE+GS NP   NKTG+RMYQQAI+GISH
Sbjct: 59  VESLNKRKPCSDYKMKEITGSGIFVANGEDDASEAGSDNP---NKTGVRMYQQAISGISH 115

Query: 121 ISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPPP 180
           ISFGEE+S+SPKKPTTLPEVAKQRELSGTLESE ++ LKKQ+SDAK KELSGHDIFAPPP
Sbjct: 116 ISFGEEESVSPKKPTTLPEVAKQRELSGTLESE-DSILKKQLSDAKCKELSGHDIFAPPP 174

Query: 181 EILPRPA-------------PAGDQSSISSTEEPVMKTSKKIYDKKFSELSGNDIFKGDV 227
           EI PRP                GDQ   +S      KT+KKIYDKKF+ELSGNDIFKGD 
Sbjct: 175 EIKPRPITPRILELKGSIDIADGDQGDTNS----AGKTAKKIYDKKFAELSGNDIFKGDA 230

Query: 228 PPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIALV 277
           PPSSAEK LS AKLREMSGSNIFADGKVE+RDYLGGVRKPPGGESSIALV
Sbjct: 231 PPSSAEKSLSGAKLREMSGSNIFADGKVEARDYLGGVRKPPGGESSIALV 280

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217073902|gb|ACJ85311.1| unknown [Medicago truncatula]

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 218/293 (74%), Positives = 241/293 (82%), Gaps = 21/293 (7%)

Query: 1   MERSTPVRKPHTSTADLLVWSETPPSDSPAQASS-TRSSVRGQPSDGISKVVFGGQVTDE 59
           MERSTPVRKPHTSTADLLVWSETP +DSPA  SS TRS    QPSDGISKVVFGGQVTDE
Sbjct: 1   MERSTPVRKPHTSTADLLVWSETPINDSPAPPSSNTRSH---QPSDGISKVVFGGQVTDE 57

Query: 60  EVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGIS 119
           EVESLN+RKPCS YKMKE+TGSGIF A  E++  E GSANP+ N KTG+RMYQQAIAGIS
Sbjct: 58  EVESLNKRKPCSEYKMKEITGSGIFVANGEDEAPEDGSANPSAN-KTGIRMYQQAIAGIS 116

Query: 120 HISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPP 179
           HISFGEE+S+SPKKP +LPEVAKQRELSGT+ESE + KL KQ+SDAK KELSGHDIFAPP
Sbjct: 117 HISFGEEESVSPKKPASLPEVAKQRELSGTMESE-DNKLNKQLSDAKCKELSGHDIFAPP 175

Query: 180 PEILPRPAP---------------AGDQSSISSTEEPVMKTSKKIYDKKFSELSGNDIFK 224
           PEI PRP                  GD    ++T EPV+KT+KKI ++KF+ELSGN+IFK
Sbjct: 176 PEIKPRPITPRILELKGSIGLRESHGDGDQDATTGEPVLKTAKKILNQKFAELSGNNIFK 235

Query: 225 GDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIALV 277
           GD PP +AEK LS AKLRE+SGSNIFADGK ESRDYLGGVRKPPGGESSIALV
Sbjct: 236 GDSPPLAAEKSLSGAKLREISGSNIFADGKAESRDYLGGVRKPPGGESSIALV 288

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388510830|gb|AFK43481.1| unknown [Medicago truncatula]

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 216/293 (73%), Positives = 241/293 (82%), Gaps = 21/293 (7%)

Query: 1   MERSTPVRKPHTSTADLLVWSETPPSDSPAQASS-TRSSVRGQPSDGISKVVFGGQVTDE 59
           MER+TPVRKPHTSTADLLVWSETP +DSPA  SS TRS    QPSDGISKVVFGGQVTDE
Sbjct: 1   MERNTPVRKPHTSTADLLVWSETPINDSPAPPSSNTRSH---QPSDGISKVVFGGQVTDE 57

Query: 60  EVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGIS 119
           EVESLN+RKPCS YKMKE+TGSGIF A  E++  E GSANP+ N KTG+RMYQQAIAGIS
Sbjct: 58  EVESLNKRKPCSEYKMKEITGSGIFVANGEDEAPEDGSANPSAN-KTGIRMYQQAIAGIS 116

Query: 120 HISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPP 179
           HISFGEE+S+SPKKP +LPEVAKQRELSGT+ESE + KL KQ+SDAK KELSGHDIFAPP
Sbjct: 117 HISFGEEESVSPKKPASLPEVAKQRELSGTMESE-DNKLNKQLSDAKCKELSGHDIFAPP 175

Query: 180 PEILPRPAP---------------AGDQSSISSTEEPVMKTSKKIYDKKFSELSGNDIFK 224
           PE+ PRP                  GD    ++T EPV+KT+KKI ++KF+ELSGN+IFK
Sbjct: 176 PEVKPRPITPRILELKGSIGLGESHGDGDQDATTGEPVLKTAKKILNQKFAELSGNNIFK 235

Query: 225 GDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIALV 277
           GD PP +AEK LS AKLRE+SGSNIFADGK ESRDYLGGVRKPPGGESSIALV
Sbjct: 236 GDSPPLAAEKSLSGAKLREISGSNIFADGKAESRDYLGGVRKPPGGESSIALV 288

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	277
TAIR|locus:2011375	286	AT1G35780 "AT1G35780" [Arabido	0.989	0.958	0.629	1.7e-84
TAIR|locus:2140000	299	AT4G39860 "AT4G39860" [Arabido	0.862	0.799	0.484	4.9e-53
TAIR|locus:2060425	328	AT2G22270 "AT2G22270" [Arabido	0.653	0.551	0.385	7.8e-23
TAIR|locus:2060430	314	ALKBH2 "homolog of E. coli alk	0.198	0.175	0.466	4.9e-05

TAIR|locus:2011375 AT1G35780 "AT1G35780" [Arabidopsis thaliana (taxid:3702)]

 Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
 Identities = 182/289 (62%), Positives = 216/289 (74%)

Query:     1 MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRG-QPSDGISKVVFGGQVTDE 59
             ME++TPVRKPH STADLL W E  P +SPA  SS RS+ R  QPSDGISKVVFGGQVTDE
Sbjct:     1 MEKNTPVRKPHMSTADLLTWPENQPFESPAAVSS-RSAARSHQPSDGISKVVFGGQVTDE 59

Query:    60 EVESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGI- 118
             EVESLN+RKPCS YKMKE+TGSGIF+   END+SE  SAN   N K+  R +QQ  A I 
Sbjct:    60 EVESLNKRKPCSNYKMKEITGSGIFSVYEENDDSELASANSATNGKS--RTFQQPPAAIM 117

Query:   119 SHISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFX- 177
             SHISFGEE+ ++PKKP T+PEVAKQRELSGTLE +S+AKL KQ SDAK KELSGH+IF  
Sbjct:   118 SHISFGEEEIVTPKKPATVPEVAKQRELSGTLEYQSDAKLNKQFSDAKCKELSGHNIFAP 177

Query:   178 ---XXXXXXXXXXXXGDQSSISSTE-EP--VMKTSKKIYDKKFSELSGNDIFKGDVP-PS 230
                             D   +  ++ +P   +KT+KKI D+KF++LSGN++FK DV  PS
Sbjct:   178 PPEIKLRPTVRALAYKDNFDLGESDTKPDGELKTAKKIADRKFTDLSGNNVFKSDVSSPS 237

Query:   231 SA--EKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIALV 277
             SA  E+ LS AKL+E+SG++IFAD K +SRDY GGVRKPPGGESSIALV
Sbjct:   238 SATAERLLSTAKLKEISGNDIFADAKAQSRDYFGGVRKPPGGESSIALV 286

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2140000 AT4G39860 "AT4G39860" [Arabidopsis thaliana (taxid:3702)]

 Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
 Identities = 124/256 (48%), Positives = 163/256 (63%)

Query:     1 MERSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRGQPSDGISKVVFGGQVTDEE 60
             MER+TPVR PHTSTADLL WSETPP    +  S+ RS    QPSDGISK++ GGQ+TDEE
Sbjct:     1 MERNTPVRNPHTSTADLLSWSETPPPPHHSTPSAARSH---QPSDGISKILGGGQITDEE 57

Query:    61 VESLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGS-ANPTPNNKTGLRMYQQAIAGIS 119
              +SLN+ K CSGYK+KEMTGSGIF      D+ + GS ++ T + KTGLR YQQ + G+S
Sbjct:    58 AQSLNKLKNCSGYKLKEMTGSGIFT-----DKGKVGSESDATTDPKTGLRYYQQTLNGMS 112

Query:   120 HISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFXXX 179
              ISF  + ++SPKKPTTL EVAKQRELSG L +E++ K  KQIS AK +E+SGHDIF   
Sbjct:   113 QISFSADGNVSPKKPTTLTEVAKQRELSGNLLTEADLKSNKQISSAKIEEISGHDIFAPP 172

Query:   180 XXXXXXXXXXGDQSSISSTE--EPV---MKTSKKIYDKKFSELSGNDIFKGDVPPSSAEK 234
                         Q +  + +  EP    ++TS K+ +    +   N +F  + P     K
Sbjct:   173 SEIQPRSLVAAQQEARGNRDMGEPAPRNLRTSVKVSNPAGGQ--SNILFSEE-PVVKTSK 229

Query:   235 PLSVAKLREMSGSNIF 250
              +   K +E++G+ IF
Sbjct:   230 KIHNQKFQELTGNGIF 245

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0005737 "cytoplasm" evidence=IDA

GO:0000280 "nuclear division" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0006342 "chromatin silencing" evidence=RCA

GO:0007000 "nucleolus organization" evidence=RCA

GO:0008283 "cell proliferation" evidence=RCA

GO:0016572 "histone phosphorylation" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

TAIR|locus:2060425 AT2G22270 "AT2G22270" [Arabidopsis thaliana (taxid:3702)]

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 74/192 (38%), Positives = 101/192 (52%)

Query:    93 SESGSANPTPNNKTGLRMYQQAIAGISHISFGEEDSISPKKPTTLPEVAKQRELSG-TLE 151
             S SG  N TP   T L    +    +S     + DS   KK  +     K + +SG  + 
Sbjct:   141 SFSGEENVTPKKPTTLNEAAKQ-KELSRTVETQADSKCKKKQISN---TKNKAMSGHDIF 196

Query:   152 SESEAKLKKQISDAKSKELSGH---DIFXXXXXXXXXXXXXGDQSSISSTEEPVMKTSKK 208
             +  E++ ++    A   E+ G+   +               G  S+   +EE V+K+SKK
Sbjct:   197 ASPESQPRRLFGGATQSEVKGNKNTEESAPRSSRASVKTSNGQSSNRLFSEEHVVKSSKK 256

Query:   209 IYDKK--FSELSGNDIFKGD-VPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVR 265
             I+++K  F  L+ N IFK D +PP  +EK  S AK REMSG NIFADGK E RDY GG R
Sbjct:   257 IHNQKSQFQGLTSNGIFKSDKIPPGYSEKMQSSAKKREMSGHNIFADGKSEYRDYYGGAR 316

Query:   266 KPPGGESSIALV 277
             +PPGGESSI+LV
Sbjct:   317 RPPGGESSISLV 328

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2060430 ALKBH2 "homolog of E. coli alkB" [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 4.9e-05, P = 4.9e-05
 Identities = 28/60 (46%), Positives = 40/60 (66%)

Query:    33 SSTRSSVRGQPS-DGISKVVFGGQVTDEEVESLNRRKPCSGYKMKEMTGSGIFAAGAEND 91
             +ST ++   QPS DGIS     GQ+T+EE ESL  +K CSG+K+KE+T S  F+   ++D
Sbjct:     6 NSTAANRSNQPSSDGISD----GQITNEEAESLINKKNCSGHKLKEVTDSDTFSDNGKDD 61


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.304   0.124   0.336    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      277       264   0.00092  114 3  11 23  0.37    35
                                                     32  0.50    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  595 (63 KB)
  Total size of DFA:  164 KB (2096 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.49u 0.11s 25.60t   Elapsed:  00:00:02
  Total cpu time:  25.49u 0.11s 25.60t   Elapsed:  00:00:02
  Start:  Fri May 10 20:22:16 2013   End:  Fri May 10 20:22:18 2013

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

GO:0006281 "DNA repair" evidence=IDA

GO:0035514 "DNA demethylase activity" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0003082401 SubName- Full=Putative uncharacterized protein; (294 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	277
pfam13266	297	pfam13266, DUF4057, Protein of unknown function (D	1e-143

>gnl|CDD|222016 pfam13266, DUF4057, Protein of unknown function (DUF4057)

 Score =  402 bits (1035), Expect = e-143
 Identities = 213/302 (70%), Positives = 239/302 (79%), Gaps = 34/302 (11%)

Query: 3   RSTPVRKPHTSTADLLVWSETPPSDSPAQASSTRSSVRGQPSDGISKVVFGGQVTDEEVE 62
           R+TPVRKPHTSTADLL WSETPP DSPA  S+       QPSDGISKVVFGGQVTDEE E
Sbjct: 1   RATPVRKPHTSTADLLTWSETPPPDSPASTSAPARRPH-QPSDGISKVVFGGQVTDEEAE 59

Query: 63  SLNRRKPCSGYKMKEMTGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGISHIS 122
           SLN+RKPCSGYK+KEMTGSGIFAA  END SES SANPT N KT LR   QA AGIS IS
Sbjct: 60  SLNKRKPCSGYKLKEMTGSGIFAANGENDASESASANPTAN-KTSLR---QAQAGISQIS 115

Query: 123 FGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKKQISDAKSKELSGHDIFAPPPEI 182
           F EE+S+SPKKPT++PEVAKQRELSGTLESE+++K+KKQIS+AKSKELSGHDIFAPPPEI
Sbjct: 116 FSEEESVSPKKPTSVPEVAKQRELSGTLESEADSKMKKQISNAKSKELSGHDIFAPPPEI 175

Query: 183 LPRP-----------------------------APAGDQSSISSTEEPVMKTSKKIYDKK 213
            PR                               PAG QS+I  +E+ V+KT+KKI+++K
Sbjct: 176 KPRSLAARLLELKENKDRGEPAPRNARTSVKVSNPAGGQSNIEFSEDSVVKTAKKIHNQK 235

Query: 214 FSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESS 273
           F+EL+GN+IFKGDVPP+SAEKPLS AKL+EMSGSNIFADGK ESRDYLGGVRKPPGGESS
Sbjct: 236 FTELTGNNIFKGDVPPASAEKPLSTAKLKEMSGSNIFADGKAESRDYLGGVRKPPGGESS 295

Query: 274 IA 275
           IA
Sbjct: 296 IA 297

This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 279 and 322 amino acids in length. Length = 297

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	277
PF13266	302	DUF4057: Protein of unknown function (DUF4057)	100.0
PF13266	302	DUF4057: Protein of unknown function (DUF4057)	100.0

>PF13266 DUF4057: Protein of unknown function (DUF4057)

Probab=100.00  E-value=1.8e-114  Score=797.54  Aligned_cols=269  Identities=80%  Similarity=1.198  Sum_probs=260.0

Q ss_pred             CCCCCCCCCCCccccccccCCCCCCCC----CCCCCCCCCCCCCCCCCcceEEeCcccchHHHHhhhccCCCCccccccc
Q 023774            3 RSTPVRKPHTSTADLLVWSETPPSDSP----AQASSTRSSVRGQPSDGISKVVFGGQVTDEEVESLNRRKPCSGYKMKEM   78 (277)
Q Consensus         3 ~~~p~r~~h~st~dll~w~~~~~~~~~----~~~~~~R~~~~~Qp~~giS~i~Fg~qvT~E~~e~l~krK~~S~aK~KEl   78 (277)
                      |+||||+|||||||||+|+|+|+++++    ++++++|+   |||++|||+|+||+|||+||+|+|+|||+||++|||||
T Consensus         1 r~~pvR~~HtsTadLltWse~~~~~~~~~~~~~~~a~Rs---hQPs~giskv~fGgQvT~EEAEsL~KRKpCS~~K~KEm   77 (302)
T PF13266_consen    1 RATPVRKPHTSTADLLTWSETPPPDSPAASSTSRPARRS---HQPSDGISKVVFGGQVTEEEAESLNKRKPCSGYKMKEM   77 (302)
T ss_pred             CCCCccCCCcCchhhccccCCCCcccccccCCCCCCCCC---CCCcccccccccCCcCCHHHHHHHhccCcCccccceec
Confidence            799999999999999999999987666    46899998   99999999999999999999999999999999999999


Q ss_pred             cCccccCCCCCCCcCCCCCCCCCCCCCCccceeecccccccceeecCCCCCCCCCCCCchHHHhhhccCCCccchhHHHH
Q 023774           79 TGSGIFAAGAENDESESGSANPTPNNKTGLRMYQQAIAGISHISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKL  158 (277)
Q Consensus        79 sGs~IFa~~~e~~~~e~~~~~~~p~~~~t~~~~~~~~~g~S~IsFgee~~vspkKp~s~~evAkqrelsgt~~de~d~k~  158 (277)
                      +|||||++++++++++.+.+++ .+|++++|+|||.++|+|||||++|++|+||||++++||||||||+||+++++|.++
T Consensus        78 TGSGIF~~~~e~~~se~~san~-~~~rt~vr~yQq~~~giSqISF~~eesvsPKKpts~~EVAKQRELSGTlese~D~k~  156 (302)
T PF13266_consen   78 TGSGIFSANGEDDASESGSANP-TPNRTGVRMYQQAINGISQISFSEEESVSPKKPTSLPEVAKQRELSGTLESEADSKM  156 (302)
T ss_pred             ccccccccCCCCcccccccCCC-CccccccceecccccccceeeecCCCCcCCCCccchHHHHHHhhhcCccccchhhHH
Confidence            9999999999999999887774 357999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhhhhcCCCCCCCCCCCCCCC-----------------------------CCCCCCCCCccCCCcchhhhhhh
Q 023774          159 KKQISDAKSKELSGHDIFAPPPEILPRP-----------------------------APAGDQSSISSTEEPVMKTSKKI  209 (277)
Q Consensus       159 ~KqlS~AK~KELSGsDIFA~~~~~~~~r-----------------------------~p~GG~SsI~fg~~~~~kt~Kki  209 (277)
                      +||+|+||+|||||||||++|+++.||+                             +|+||.|+|.|++|+|+||+|||
T Consensus       157 kkq~S~AK~KELSGhdIFapp~~~~pr~~~~r~le~k~~~~~~e~~~~~~~ts~~~~n~a~~~s~~~~~~~~~~Ktakki  236 (302)
T PF13266_consen  157 KKQISNAKSKELSGHDIFAPPPEIKPRSLTARSLELKENKDRGEPAPRNVRTSVKVSNPAGGQSNIEFGEDSVVKTAKKI  236 (302)
T ss_pred             HhhhhhhhhhhcccCcccCCCccCCCCcchhhhhhhcccccccCCCCCcccccccccCCcCcccccccccCcchhhhhhh
Confidence            9999999999999999999999999884                             89999999999999999999999


Q ss_pred             hhhhhhcccCCCCCCCCCCCCCCCCCChhhhhhhccCCCcCCCCCcCccccCCCcccCCCCCCCcc
Q 023774          210 YDKKFSELSGNDIFKGDVPPSSAEKPLSVAKLREMSGSNIFADGKVESRDYLGGVRKPPGGESSIA  275 (277)
Q Consensus       210 ~~~K~~ElsGn~IFk~d~~~~~~ek~ls~Akl~emsG~dIFadgk~~~rd~~gg~rkppgg~ssia  275 (277)
                      |+|||+||+|||||++|.+++++||+||+||||||+|+|||||||+++|||+|||||||||+||||
T Consensus       237 ~~~K~aeltGN~IFk~d~p~~saek~lS~AKlrEmsGsdIFaDgk~~~rd~~gg~rkPPGG~SSIa  302 (302)
T PF13266_consen  237 SNQKFAELTGNNIFKGDVPPASAEKPLSSAKLREMSGSDIFADGKAESRDYLGGVRKPPGGESSIA  302 (302)
T ss_pred             hhhhhhhcccCcccCCCCCCCCcccchhhhhHhhcccccccccCCcccchhcCCccCCCCCCCcCC
Confidence            999999999999999999999999999999999999999999999999999999999999999997

>PF13266 DUF4057: Protein of unknown function (DUF4057)

Probab=100.00  E-value=1.1e-43  Score=328.24  Aligned_cols=162  Identities=30%  Similarity=0.358  Sum_probs=146.9

Q ss_pred             CCCCCC-CC-CCCCcceEEeCccc---------------------chHHHHhhhccCCCCccccccccCccccCCCCCCC
Q 023774           35 TRSSVR-GQ-PSDGISKVVFGGQV---------------------TDEEVESLNRRKPCSGYKMKEMTGSGIFAAGAEND   91 (277)
Q Consensus        35 ~R~~~~-~Q-p~~giS~i~Fg~qv---------------------T~E~~e~l~krK~~S~aK~KElsGs~IFa~~~e~~   91 (277)
                      .|++|| || ..+|||||+||++.                     |.|.+.+++.+||+|+||+|||+|||||++++++.
T Consensus       102 ~rt~vr~yQq~~~giSqISF~~eesvsPKKpts~~EVAKQRELSGTlese~D~k~kkq~S~AK~KELSGhdIFapp~~~~  181 (302)
T PF13266_consen  102 NRTGVRMYQQAINGISQISFSEEESVSPKKPTSLPEVAKQRELSGTLESEADSKMKKQISNAKSKELSGHDIFAPPPEIK  181 (302)
T ss_pred             cccccceecccccccceeeecCCCCcCCCCccchHHHHHHhhhcCccccchhhHHHhhhhhhhhhhcccCcccCCCccCC
Confidence            355555 88 55899999999887                     67777788888999999999999999999999999


Q ss_pred             cCCC---------C--CCCCCCCCCCccceeecccccccceeecCCCCCCCCCCCCchHHHhhhccCCCccchhHHHHhh
Q 023774           92 ESES---------G--SANPTPNNKTGLRMYQQAIAGISHISFGEEDSISPKKPTTLPEVAKQRELSGTLESESEAKLKK  160 (277)
Q Consensus        92 ~~e~---------~--~~~~~p~~~~t~~~~~~~~~g~S~IsFgee~~vspkKp~s~~evAkqrelsgt~~de~d~k~~K  160 (277)
                      ++..         +  .+.+.|++.++++++.++++|.|+|.|++|++|++.|+|+.++||+|+||+||++|.++.+++|
T Consensus       182 pr~~~~r~le~k~~~~~~e~~~~~~~ts~~~~n~a~~~s~~~~~~~~~~Ktakki~~~K~aeltGN~IFk~d~p~~saek  261 (302)
T PF13266_consen  182 PRSLTARSLELKENKDRGEPAPRNVRTSVKVSNPAGGQSNIEFGEDSVVKTAKKISNQKFAELTGNNIFKGDVPPASAEK  261 (302)
T ss_pred             CCcchhhhhhhcccccccCCCCCcccccccccCCcCcccccccccCcchhhhhhhhhhhhhhcccCcccCCCCCCCCccc
Confidence            9851         1  2334688999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhhcCCCCCC-----CCCCCCCCCCCCCCCCCCc
Q 023774          161 QISDAKSKELSGHDIFA-----PPPEILPRPAPAGDQSSIS  196 (277)
Q Consensus       161 qlS~AK~KELSGsDIFA-----~~~~~~~~r~p~GG~SsI~  196 (277)
                      +||.||+|||+||||||     .++|++++|+||||+|||+
T Consensus       262 ~lS~AKlrEmsGsdIFaDgk~~~rd~~gg~rkPPGG~SSIa  302 (302)
T PF13266_consen  262 PLSSAKLREMSGSDIFADGKAESRDYLGGVRKPPGGESSIA  302 (302)
T ss_pred             chhhhhHhhcccccccccCCcccchhcCCccCCCCCCCcCC
Confidence            99999999999999999     8999999999999999996

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00