Citrus Sinensis ID: 023812


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------
MEESWGSGYKEYVAGLIAGVATVIVGHPFDTVKVKLQKHNTEVHGIRYKNGLHCTARILRTEGVRGLYRGATPSFLGMAFESSLLFGIYSQTKQLLQGGVQSGGPQPNVIIPSAAFGGSIISFVLCPSELVKCRMQVQGTDSLVPKSVRYTSPLDCALRTVKQEGVMAIFRGGSTTFLREAIGNAVFFSVYEHVRYYMHLKLKAASSDHSNLIDMGIGIVSGGLGGVAVSILTALHFYFFLLCFSFTLILFYLLCFLVLVSCSTFGCCKNHYPDCSR
cccccccHHHHHHHHHHHHHHHHHHcccccHHHHccccccccccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHcccccEEHHcHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccccccccccccccccccccccc
cccccccHHHHHHHHHHHHHHHHHEcccHHHHHHHHHHccccccccccccHHHHHHHHHHHccccEEEccccHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccEEEccccHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccc
meeswgsgYKEYVAGLIAGVATVIVGHPFDTVKVKLQKhntevhgiryknglHCTARILRTEGvrglyrgatpsflGMAFESSLLFGIYSQTKQLlqggvqsggpqpnviipsaafggsiisfVLCPSELVKcrmqvqgtdslvpksvrytspldcaLRTVKQEGVMAIFRGGSTTFLREAIGNAVFFSVYEHVRYYMHLKLKAassdhsnlidmGIGIVSGGLGGVAVSILTALHFYFFLLCFSFTLILFYLLCFLVLVScstfgccknhypdcsr
MEESWGSGYKEYVAGLIAGVATVIVGHPFDTVKVKLQKHntevhgiryknglhcTARILRTEGVRGLYRGATPSFLGMAFESSLLFGIYSQTKQLLQGGVQSGGPQPNVIIPSAAFGGSIISFVLCPSELVKCRMQVqgtdslvpksvrytsPLDCALRTVKQEGVMAIFRGGSTTFLREAIGNAVFFSVYEHVRYYMHLKLKAASSDHSNLIDMGIGIVSGGLGGVAVSILTALHFYFFLLCFSFTLILFYLLCFLVLVSCSTFGCCKNHYPDCSR
MEESWGSGYKEYVAGLIAGVATVIVGHPFDTVKVKLQKHNTEVHGIRYKNGLHCTARILRTEGVRGLYRGATPSFLGMAFESSLLFGIYSQTKQLLQGGVQSGGPQPNVIIPSAAFGGSIISFVLCPSELVKCRMQVQGTDSLVPKSVRYTSPLDCALRTVKQEGVMAIFRGGSTTFLREAIGNAVFFSVYEHVRYYMHLKLKAASSDHSNLIDMgigivsgglggvavsilTALHFYFFLLCFSFtlilfyllcflvlvscstFGCCKNHYPDCSR
*****GSGYKEYVAGLIAGVATVIVGHPFDTVKVKLQKHNTEVHGIRYKNGLHCTARILRTEGVRGLYRGATPSFLGMAFESSLLFGIYSQTKQLLQGGVQSGGPQPNVIIPSAAFGGSIISFVLCPSELVKCRMQVQGTDSLVPKSVRYTSPLDCALRTVKQEGVMAIFRGGSTTFLREAIGNAVFFSVYEHVRYYMHLKLKAASSDHSNLIDMGIGIVSGGLGGVAVSILTALHFYFFLLCFSFTLILFYLLCFLVLVSCSTFGCCKNHY*****
******S**KEYVAGLIAGVATVIVGHPFDTVKVKLQKHNT****IRYKNGLHCTARILRTEGVRGLYRGATPSFLGMAFESSLLFGIYSQTKQLLQG*****GPQPNVIIPSAAFGGSIISFVLCPSELVKCRMQ****************PLDCALRTVKQEGVMAIFRGGSTTFLREAIGNAVFFSVYEHVRYYM****************MGIGIVSGGLGGVAVSILTALHFYFFLLCFSFTLILFYLLCFLVLVSCSTFGCCKNHYPDC**
MEESWGSGYKEYVAGLIAGVATVIVGHPFDTVKVKLQKHNTEVHGIRYKNGLHCTARILRTEGVRGLYRGATPSFLGMAFESSLLFGIYSQTKQLLQGGVQSGGPQPNVIIPSAAFGGSIISFVLCPSELVKCRMQVQGTDSLVPKSVRYTSPLDCALRTVKQEGVMAIFRGGSTTFLREAIGNAVFFSVYEHVRYYMHLKLKAASSDHSNLIDMGIGIVSGGLGGVAVSILTALHFYFFLLCFSFTLILFYLLCFLVLVSCSTFGCCKNHYPDCSR
****WGSGYKEYVAGLIAGVATVIVGHPFDTVKVKLQKHNTEVHGIRYKNGLHCTARILRTEGVRGLYRGATPSFLGMAFESSLLFGIYSQTKQLLQGGVQSGGPQPNVIIPSAAFGGSIISFVLCPSELVKCRMQVQGTDSLVPKSVRYTSPLDCALRTVKQEGVMAIFRGGSTTFLREAIGNAVFFSVYEHVRYYMHLKLKAASSDHSNLIDMGIGIVSGGLGGVAVSILTALHFYFFLLCFSFTLILFYLLCFLVLVSCSTFGCCKNHYP*C**
oooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
ooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooo
oooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
oooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooo
oooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiii
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MEESWGSGYKEYVAGLIAGVATVIVGHPFDTVKVKLQKHNTEVHGIRYKNGLHCTARILRTEGVRGLYRGATPSFLGMAFESSLLFGIYSQTKQLLQGGVQSGGPQPNVIIPSAAFGGSIISFVLCPSELVKCRMQVQGTDSLVPKSVRYTSPLDCALRTVKQEGVMAIFRGGSTTFLREAIGNAVFFSVYEHVRYYMHLKLKAASSDHSNLIDMGIGIVSGGLGGVAVSILTALHFYFFLLCFSFTLILFYLLCFLVLVSCSTFGCCKNHYPDCSR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query277 2.2.26 [Sep-21-2011]
Q84UC7311 Mitochondrial arginine tr yes no 0.794 0.707 0.7 2e-91
Q54FE6285 Mitochondrial substrate c yes no 0.743 0.722 0.405 3e-34
Q93XM7300 Mitochondrial carnitine/a no no 0.768 0.71 0.348 6e-29
Q08DK7298 Mitochondrial carnitine/a yes no 0.613 0.570 0.379 3e-25
Q5HZE0306 Mitochondrial carnitine/a yes no 0.613 0.555 0.379 3e-25
Q55E85344 Mitochondrial substrate c no no 0.675 0.543 0.314 2e-24
Q8BL03306 Mitochondrial carnitine/a yes no 0.613 0.555 0.373 3e-24
Q9VQG4306 Congested-like trachea pr yes no 0.794 0.718 0.297 2e-23
Q8N8R3303 Mitochondrial carnitine/a yes no 0.613 0.561 0.357 9e-23
Q54BM3300 Mitochondrial substrate c no no 0.761 0.703 0.342 9e-23
>sp|Q84UC7|BAC1_ARATH Mitochondrial arginine transporter BAC1 OS=Arabidopsis thaliana GN=BAC1 PE=1 SV=1 Back     alignment and function desciption
 Score =  335 bits (859), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 154/220 (70%), Positives = 188/220 (85%)

Query: 9   YKEYVAGLIAGVATVIVGHPFDTVKVKLQKHNTEVHGIRYKNGLHCTARILRTEGVRGLY 68
           YKEYVAG++AG+ATV VGHPFDTVKVKLQKHNT+V G+RYKNGLHC +RIL+TEGV+GLY
Sbjct: 15  YKEYVAGMMAGLATVAVGHPFDTVKVKLQKHNTDVQGLRYKNGLHCASRILQTEGVKGLY 74

Query: 69  RGATPSFLGMAFESSLLFGIYSQTKQLLQGGVQSGGPQPNVIIPSAAFGGSIISFVLCPS 128
           RGAT SF+GMAFESSL+FGIYSQ K  L+G +   GP+P +I+PSA FGG+IISFVLCP+
Sbjct: 75  RGATSSFMGMAFESSLMFGIYSQAKLFLRGTLPDDGPRPEIIVPSAMFGGAIISFVLCPT 134

Query: 129 ELVKCRMQVQGTDSLVPKSVRYTSPLDCALRTVKQEGVMAIFRGGSTTFLREAIGNAVFF 188
           ELVKCRMQ+QGTDSLVP   RY SPLDCA++TVK +GV  IFRGGS T LRE  GNAVFF
Sbjct: 135 ELVKCRMQIQGTDSLVPNFRRYNSPLDCAVQTVKNDGVTGIFRGGSATLLRECTGNAVFF 194

Query: 189 SVYEHVRYYMHLKLKAASSDHSNLIDMGIGIVSGGLGGVA 228
           +VYE++RY++H +L+ +      L+DMGIG+++GGLGG+A
Sbjct: 195 TVYEYLRYHIHSRLEDSKLKDGYLVDMGIGVLTGGLGGIA 234




Mitochondrial arginine transporter that catalyzes the counter-exchange of arginine with lysine, ornithine, arginine and histidine. Substrate preference in reconstituted proteoliposomes is arginine > lysine > ornithine > histidine. May be involved in the delivery of arginine, released from seed reserves, to mitochondrial arginase and the export of ornithine.
Arabidopsis thaliana (taxid: 3702)
>sp|Q54FE6|MCFS_DICDI Mitochondrial substrate carrier family protein S OS=Dictyostelium discoideum GN=mcfS PE=3 SV=1 Back     alignment and function description
>sp|Q93XM7|MCAT_ARATH Mitochondrial carnitine/acylcarnitine carrier-like protein OS=Arabidopsis thaliana GN=BOU PE=1 SV=1 Back     alignment and function description
>sp|Q08DK7|MCATL_BOVIN Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Bos taurus GN=SLC25A29 PE=2 SV=1 Back     alignment and function description
>sp|Q5HZE0|MCATL_RAT Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Rattus norvegicus GN=Slc25a29 PE=2 SV=1 Back     alignment and function description
>sp|Q55E85|MCFD_DICDI Mitochondrial substrate carrier family protein D OS=Dictyostelium discoideum GN=mcfD PE=3 SV=1 Back     alignment and function description
>sp|Q8BL03|MCATL_MOUSE Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Mus musculus GN=Slc25a29 PE=2 SV=1 Back     alignment and function description
>sp|Q9VQG4|COLT_DROME Congested-like trachea protein OS=Drosophila melanogaster GN=colt PE=2 SV=1 Back     alignment and function description
>sp|Q8N8R3|MCATL_HUMAN Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Homo sapiens GN=SLC25A29 PE=2 SV=2 Back     alignment and function description
>sp|Q54BM3|MCFG_DICDI Mitochondrial substrate carrier family protein G OS=Dictyostelium discoideum GN=mcfG PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query277
225443636303 PREDICTED: mitochondrial substrate carri 0.815 0.745 0.802 1e-104
224125532302 predicted protein [Populus trichocarpa] 0.794 0.728 0.818 1e-101
356519603305 PREDICTED: mitochondrial substrate carri 0.823 0.747 0.767 5e-98
356546221305 PREDICTED: mitochondrial substrate carri 0.823 0.747 0.758 2e-97
449457753305 PREDICTED: mitochondrial substrate carri 0.754 0.685 0.767 2e-90
42569598311 Mitochondrial substrate carrier family p 0.794 0.707 0.7 1e-89
388521623270 unknown [Medicago truncatula] 0.772 0.792 0.710 2e-86
147774459270 hypothetical protein VITISV_001900 [Viti 0.696 0.714 0.679 1e-79
1707010344 putative mitochondrial carrier protein [ 0.801 0.645 0.593 1e-70
212274821306 uncharacterized protein LOC100191316 [Ze 0.797 0.722 0.607 1e-69
>gi|225443636|ref|XP_002280023.1| PREDICTED: mitochondrial substrate carrier family protein S [Vitis vinifera] gi|297740410|emb|CBI30592.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 183/228 (80%), Positives = 210/228 (92%), Gaps = 2/228 (0%)

Query: 1   MEESWGSGYKEYVAGLIAGVATVIVGHPFDTVKVKLQKHNTEVHGIRYKNGLHCTARILR 60
           MEE+  SGYKEYVAGL+AGVATV +GHPFDTVKVKLQKHNTE HG++YKNGLHCTARI++
Sbjct: 1   MEET--SGYKEYVAGLLAGVATVGIGHPFDTVKVKLQKHNTEAHGMKYKNGLHCTARIVK 58

Query: 61  TEGVRGLYRGATPSFLGMAFESSLLFGIYSQTKQLLQGGVQSGGPQPNVIIPSAAFGGSI 120
           +EGV+GLYRGAT SFLGMAFESSLLFGIYS+TKQ +Q G+Q+  PQP VIIPSAA+ G+I
Sbjct: 59  SEGVKGLYRGATSSFLGMAFESSLLFGIYSRTKQKMQEGLQNTRPQPQVIIPSAAYSGAI 118

Query: 121 ISFVLCPSELVKCRMQVQGTDSLVPKSVRYTSPLDCALRTVKQEGVMAIFRGGSTTFLRE 180
           ISFVLCPSEL+KCRMQ+QGTDSLVPKS RY+SPLDCAL+T+K EGV  IFRGG TT LRE
Sbjct: 119 ISFVLCPSELLKCRMQIQGTDSLVPKSSRYSSPLDCALKTMKTEGVTGIFRGGLTTLLRE 178

Query: 181 AIGNAVFFSVYEHVRYYMHLKLKAASSDHSNLIDMGIGIVSGGLGGVA 228
           + GNAVFFSVYE+VRYYMHL+LKAASSDH++LID+GIGIV+GGLGGVA
Sbjct: 179 SFGNAVFFSVYEYVRYYMHLQLKAASSDHNDLIDVGIGIVTGGLGGVA 226




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224125532|ref|XP_002329828.1| predicted protein [Populus trichocarpa] gi|222870890|gb|EEF08021.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356519603|ref|XP_003528461.1| PREDICTED: mitochondrial substrate carrier family protein S-like [Glycine max] Back     alignment and taxonomy information
>gi|356546221|ref|XP_003541528.1| PREDICTED: mitochondrial substrate carrier family protein S-like [Glycine max] Back     alignment and taxonomy information
>gi|449457753|ref|XP_004146612.1| PREDICTED: mitochondrial substrate carrier family protein S-like [Cucumis sativus] gi|449511666|ref|XP_004164021.1| PREDICTED: mitochondrial substrate carrier family protein S-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|42569598|ref|NP_180938.2| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] gi|75298143|sp|Q84UC7.1|BAC1_ARATH RecName: Full=Mitochondrial arginine transporter BAC1; AltName: Full=Mitochondrial basic amino acid carrier 1; Short=AtMBAC1 gi|28207628|gb|AAO32062.1| mitochondrial basic amino acid carrier [Arabidopsis thaliana] gi|108385362|gb|ABF85776.1| At2g33820 [Arabidopsis thaliana] gi|330253796|gb|AEC08890.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|388521623|gb|AFK48873.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|147774459|emb|CAN59792.1| hypothetical protein VITISV_001900 [Vitis vinifera] Back     alignment and taxonomy information
>gi|1707010|gb|AAC69138.1| putative mitochondrial carrier protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|212274821|ref|NP_001130222.1| uncharacterized protein LOC100191316 [Zea mays] gi|194688588|gb|ACF78378.1| unknown [Zea mays] gi|414870723|tpg|DAA49280.1| TPA: hypothetical protein ZEAMMB73_785712 [Zea mays] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query277
TAIR|locus:2057671311 MBAC1 [Arabidopsis thaliana (t 0.758 0.675 0.696 1.1e-78
DICTYBASE|DDB_G0290913285 mcfS "putative mitochondrial c 0.696 0.677 0.398 1.3e-31
TAIR|locus:2178590300 BOU "A BOUT DE SOUFFLE" [Arabi 0.725 0.67 0.346 6.4e-28
ZFIN|ZDB-GENE-050913-70305 slc25a29 "solute carrier famil 0.624 0.567 0.391 1.7e-27
UNIPROTKB|E1C3I5301 SLC25A29 "Uncharacterized prot 0.649 0.598 0.361 2.2e-27
DICTYBASE|DDB_G0269352344 mcfD "mitochondrial substrate 0.703 0.566 0.320 4.5e-27
UNIPROTKB|Q08DK7298 SLC25A29 "Mitochondrial carnit 0.610 0.567 0.393 1.5e-26
ASPGD|ASPL0000049231326 amc-1 [Emericella nidulans (ta 0.649 0.552 0.388 1.5e-26
RGD|1308104306 Slc25a29 "solute carrier famil 0.610 0.552 0.393 1.9e-26
UNIPROTKB|F1SAP1303 SLC25A29 "Uncharacterized prot 0.613 0.561 0.390 5.2e-26
TAIR|locus:2057671 MBAC1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
 Identities = 147/211 (69%), Positives = 177/211 (83%)

Query:     6 GSG-YKEYVAGLIAGVATVIVGHPFDTVKVKLQKHNTEVHGIRYKNGLHCTARILRTEGV 64
             G G YKEYVAG++AG+ATV VGHPFDTVKVKLQKHNT+V G+RYKNGLHC +RIL+TEGV
Sbjct:    11 GFGFYKEYVAGMMAGLATVAVGHPFDTVKVKLQKHNTDVQGLRYKNGLHCASRILQTEGV 70

Query:    65 RGLYRGATPSFLGMAFESSLLFGIYSQTKQLLQGGVQSGGPQPNVIIPSAAFGGSIISFV 124
             +GLYRGAT SF+GMAFESSL+FGIYSQ K  L+G +   GP+P +I+PSA FGG+IISFV
Sbjct:    71 KGLYRGATSSFMGMAFESSLMFGIYSQAKLFLRGTLPDDGPRPEIIVPSAMFGGAIISFV 130

Query:   125 LCPSELVKCRMQVQGTDSLVPKSVRYTSPLDCALRTVKQEGVMAIFRGGSTTFLREAIGN 184
             LCP+ELVKCRMQ+QGTDSLVP   RY SPLDCA++TVK +GV  IFRGGS T LRE  GN
Sbjct:   131 LCPTELVKCRMQIQGTDSLVPNFRRYNSPLDCAVQTVKNDGVTGIFRGGSATLLRECTGN 190

Query:   185 AVFFSVYEHVRYYMHLKLKAASSDHSNLIDM 215
             AVFF+VYE++RY++H +L+ +      L+DM
Sbjct:   191 AVFFTVYEYLRYHIHSRLEDSKLKDGYLVDM 221




GO:0005215 "transporter activity" evidence=IEA
GO:0005739 "mitochondrion" evidence=ISM
GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISS
GO:0006810 "transport" evidence=IEA
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0000064 "L-ornithine transmembrane transporter activity" evidence=IGI
GO:0005290 "L-histidine transmembrane transporter activity" evidence=IDA
GO:0015181 "arginine transmembrane transporter activity" evidence=IDA
GO:0015189 "L-lysine transmembrane transporter activity" evidence=IDA
DICTYBASE|DDB_G0290913 mcfS "putative mitochondrial carnitine/acylcarnitine transporter" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2178590 BOU "A BOUT DE SOUFFLE" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050913-70 slc25a29 "solute carrier family 25, member 29" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1C3I5 SLC25A29 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269352 mcfD "mitochondrial substrate carrier family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q08DK7 SLC25A29 "Mitochondrial carnitine/acylcarnitine carrier protein CACL" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
ASPGD|ASPL0000049231 amc-1 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
RGD|1308104 Slc25a29 "solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1SAP1 SLC25A29 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q84UC7BAC1_ARATHNo assigned EC number0.70.79420.7073yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query277
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 1e-25
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 6e-18
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-09
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 3e-05
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 9e-04
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 96.6 bits (241), Expect = 1e-25
 Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 1/95 (1%)

Query: 4  SWGSGYKEYVAGLIAGVATVIVGHPFDTVKVKLQKHNTEVHGIRYKNGLHCTARILRTEG 63
          S  S     +AG IAG     V +P D VK +LQ  +      +YK  L C  +I + EG
Sbjct: 1  SPLSFLASLLAGGIAGAIAATVTYPLDVVKTRLQ-SSAAGGSRKYKGILDCFKKIYKEEG 59

Query: 64 VRGLYRGATPSFLGMAFESSLLFGIYSQTKQLLQG 98
          +RGLY+G  P+ L +A  +++ FG Y   K+LL  
Sbjct: 60 IRGLYKGLLPNLLRVAPAAAIYFGTYETLKKLLLK 94


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 277
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 99.98
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.98
KOG0036463 consensus Predicted mitochondrial carrier protein 99.97
KOG0766297 consensus Predicted mitochondrial carrier protein 99.97
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 99.97
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.97
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.97
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.96
KOG0765333 consensus Predicted mitochondrial carrier protein 99.96
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.96
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.96
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.96
KOG0765333 consensus Predicted mitochondrial carrier protein 99.95
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.95
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.95
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.95
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.95
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.94
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.94
KOG0036463 consensus Predicted mitochondrial carrier protein 99.94
KOG0766297 consensus Predicted mitochondrial carrier protein 99.93
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.93
KOG0770353 consensus Predicted mitochondrial carrier protein 99.92
KOG0769308 consensus Predicted mitochondrial carrier protein 99.9
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.87
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.79
KOG2745321 consensus Mitochondrial carrier protein [General f 99.78
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.74
KOG1519297 consensus Predicted mitochondrial carrier protein 99.57
KOG2954427 consensus Mitochondrial carrier protein [General f 99.46
KOG1519297 consensus Predicted mitochondrial carrier protein 99.43
KOG2745321 consensus Mitochondrial carrier protein [General f 99.4
KOG2954427 consensus Mitochondrial carrier protein [General f 98.46
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=2.8e-43  Score=295.25  Aligned_cols=225  Identities=29%  Similarity=0.405  Sum_probs=194.8

Q ss_pred             hHHHHHHHHHHHHhhHhhcccHhHHHHHHhcCCCC-CCCcccCCHHHHHHHHHHhhchhhcccCcchhHHHHHHhhhHHH
Q 023812            8 GYKEYVAGLIAGVATVIVGHPFDTVKVKLQKHNTE-VHGIRYKNGLHCTARILRTEGVRGLYRGATPSFLGMAFESSLLF   86 (277)
Q Consensus         8 ~~~~~~aG~~ag~~~~~i~~Pld~ik~rlq~~~~~-~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~l~~~~~~~~~~f   86 (277)
                      .|+.+++|..+|+++.+++||||++|+|+|++... ...+.|++..+++++|++.||+||||||+.|++++..+.|++||
T Consensus         5 ~~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sWgiYF   84 (299)
T KOG0764|consen    5 QWEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGRTSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSWGLYF   84 (299)
T ss_pred             chhhhhhhhhhhhhhhhhccchhHhhhhhhhccCccccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhHHHHH
Confidence            46677999999999999999999999999999543 34568999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhHHHHHHHHHHHHHhhhccHHHHHHHHHhccCCCCCCCCCCCCCHHHHHHHHHHhhhh
Q 023812           87 GIYSQTKQLLQGGVQSGGPQPNVIIPSAAFGGSIISFVLCPSELVKCRMQVQGTDSLVPKSVRYTSPLDCALRTVKQEGV  166 (277)
Q Consensus        87 ~~~~~~k~~l~~~~~~~~~~~~~~~~ag~~Ag~~~~~v~~P~eviktrlq~~~~~~~~~~~~~y~~~~~~~~~i~~~eGi  166 (277)
                      .+||.+|+.+.+..++...++..++.+++.||++..++++|++|+|||++.+....   +...|+|++|++++|+++||+
T Consensus        85 ~~Y~~~K~~~~~~~~~~~l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~~---~~~~Y~~~f~a~rki~k~EG~  161 (299)
T KOG0764|consen   85 FFYDFLKSFITEGFNSGLLSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKNV---QSTAYKGMFDALRKIYKEEGF  161 (299)
T ss_pred             HHHHHHHHHHhcCCCcccchHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhcccc---cccccccHHHHHHHHHHHHhH
Confidence            99999999998776666668888999999999999999999999999999998653   457899999999999999999


Q ss_pred             hhcchhhHHhHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 023812          167 MAIFRGGSTTFLREAIGNAVFFSVYEHVRYYMHLKLKAASSDHSNLIDMGIGIVSGGLGGVAVSILTALHFYF  239 (277)
Q Consensus       167 ~glyrG~~~~~lr~~p~~~i~f~~ye~lk~~~~~~~~~~~~~~~~~~~~~~~~~sg~~ag~~a~~~t~P~~~~  239 (277)
                      +|||||+.|.++. +.+.+++|..||.+|.++.+..+++.+   ..+.....++.+.+|.++|+.+|||+.-.
T Consensus       162 rgLY~GlVP~L~G-vshgAiQF~~YE~lK~~~~~~~~~~~d---~~l~n~~~i~~as~SKv~Ast~TYP~qVl  230 (299)
T KOG0764|consen  162 RGLYKGLVPGLLG-VSHGAIQFPAYEELKLRKNRKQGRSTD---NHLSNLDYIALASLSKVFASTLTYPHQVL  230 (299)
T ss_pred             HHHHhhhhhHhhh-hchhhhhhhhHHHHHHHHHHhcCCCcc---cchhhHHHHHHHHHHHHHHHHhcchHHHH
Confidence            9999999999995 668899999999999998755443322   22233344444459999999999998643



>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query277
2lck_A303 Structure Of The Mitochondrial Uncoupling Protein 2 3e-12
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 1e-11
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Iteration: 1

Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 84/188 (44%), Gaps = 18/188 (9%) Query: 13 VAGLIAGVATVIVGHPFDTVKVKLQKHNTEVHGIRYKNGLHCTARILRTEGVRGLYRGAT 72 +AG G V V P D VKV+ Q G RY++ + I R EG+RGL++G + Sbjct: 109 LAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTS 168 Query: 73 PSFLGMAFESSLLFGIYSQTKQ-LLQGGVQSGGPQPNVIIP---SAAFGGSIISFVLC-P 127 P+ A + Y K LL+ + + +P ++AFG + V+ P Sbjct: 169 PNVARNAIVNCAELVTYDLIKDTLLKANLMTDD------LPCHFTSAFGAGFCTTVIASP 222 Query: 128 SELVKCRMQVQGTDSLVPKSVRYTSPLDCALRTVKQEGVMAIFRGGSTTFLREAIGNAVF 187 ++VK R +Y S CAL +++EG A ++G +FLR N V Sbjct: 223 VDVVKTRYMNSALG-------QYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVM 275 Query: 188 FSVYEHVR 195 F YE ++ Sbjct: 276 FVTYEQLK 283
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query277
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 5e-43
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 6e-41
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-15
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 7e-37
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 5e-31
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-12
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
 Score =  147 bits (374), Expect = 5e-43
 Identities = 49/230 (21%), Positives = 88/230 (38%), Gaps = 20/230 (8%)

Query: 12  YVAGLIAGVATVIVGHPFDTVKVKLQ------KHNTEVHGIRYKNGLHCTARILRTEGVR 65
           ++    A     ++  P DT KV+LQ               +Y+  L     ++RTEG R
Sbjct: 5   FLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPR 64

Query: 66  GLYRGATPSFLGMAFESSLLFGIYSQTKQLLQGGVQSGGPQPNVIIPSAAFGGSIISFVL 125
            LY G           +S+  G+Y   KQ    G +  G    ++  + +  G++   V 
Sbjct: 65  SLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHAGIGSRLL--AGSTTGALAVAVA 122

Query: 126 CPSELVKCRMQVQGTDSLVPKSVRYTSPLDCALRTVKQEGVMAIFRGGSTTFLREAIGNA 185
            P+++VK R Q Q          RY S ++      ++EG+  +++G S    R AI N 
Sbjct: 123 QPTDVVKVRFQAQAR---AGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNC 179

Query: 186 VFFSVYEHVRYYMHLKLKAASSDHSNLID-MGIGIVSGGLGGVAVSILTA 234
                Y+ +        K      + + D +     S    G   +++ +
Sbjct: 180 AELVTYDLI--------KDTLLKANLMTDDLPCHFTSAFGAGFCTTVIAS 221


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query277
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=4e-41  Score=297.24  Aligned_cols=226  Identities=17%  Similarity=0.265  Sum_probs=191.0

Q ss_pred             CCccchHHHHHHHHHHHHhhHhhcccHhHHHHHHhcCCCCC---CCcccCCHHHHHHHHHHhhchhhcccCcchhHHHHH
Q 023812            3 ESWGSGYKEYVAGLIAGVATVIVGHPFDTVKVKLQKHNTEV---HGIRYKNGLHCTARILRTEGVRGLYRGATPSFLGMA   79 (277)
Q Consensus         3 ~~~~~~~~~~~aG~~ag~~~~~i~~Pld~ik~rlq~~~~~~---~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~l~~~~   79 (277)
                      |+..+.++++++|++||+++.+++||+|++|+|+|++....   ...+|++.++++++++++||++|||||+.+++++.+
T Consensus         2 ~~~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~   81 (297)
T 1okc_A            2 DQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYF   81 (297)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHH
Confidence            45567889999999999999999999999999999986421   234689999999999999999999999999999999


Q ss_pred             HhhhHHHHHHHHHHHHHhCCCCCCC---CCchhHHHHHHHHHHHHHhhhccHHHHHHHHHhccCCCCCCCCCCCCCHHHH
Q 023812           80 FESSLLFGIYSQTKQLLQGGVQSGG---PQPNVIIPSAAFGGSIISFVLCPSELVKCRMQVQGTDSLVPKSVRYTSPLDC  156 (277)
Q Consensus        80 ~~~~~~f~~~~~~k~~l~~~~~~~~---~~~~~~~~ag~~Ag~~~~~v~~P~eviktrlq~~~~~~~~~~~~~y~~~~~~  156 (277)
                      +..+++|.+||.+|+.+.+..+...   ......+++|++||+++.++++|+|+||+|+|++....  +...+|++.+++
T Consensus        82 ~~~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~--~~~~~~~~~~~~  159 (297)
T 1okc_A           82 PTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG--AAQREFTGLGNC  159 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS--TTTCSCSSHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCC--CcCcCCCCHHHH
Confidence            9999999999999996543222111   12345688999999999999999999999999985321  134579999999


Q ss_pred             HHHHHHhhhhhhcchhhHHhHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 023812          157 ALRTVKQEGVMAIFRGGSTTFLREAIGNAVFFSVYEHVRYYMHLKLKAASSDHSNLIDMGIGIVSGGLGGVAVSILTALH  236 (277)
Q Consensus       157 ~~~i~~~eGi~glyrG~~~~~lr~~p~~~i~f~~ye~lk~~~~~~~~~~~~~~~~~~~~~~~~~sg~~ag~~a~~~t~P~  236 (277)
                      +++|+++||++|||||+.++++|++|+++++|.+||.+|+.+.+..     +    .+....+++|++||++++++++|.
T Consensus       160 ~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~-----~----~~~~~~~~~g~~ag~~a~~~t~P~  230 (297)
T 1okc_A          160 ITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK-----N----VHIIVSWMIAQTVTAVAGLVSYPF  230 (297)
T ss_dssp             HHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG-----C----SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccCC-----C----ccHHHHHHHHHHHHHHHHHhcChH
Confidence            9999999999999999999999999999999999999998654321     1    245567899999999999999997


Q ss_pred             HHH
Q 023812          237 FYF  239 (277)
Q Consensus       237 ~~~  239 (277)
                      --+
T Consensus       231 dvv  233 (297)
T 1okc_A          231 DTV  233 (297)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543



>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 277
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-17
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-14
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 5e-07
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 77.4 bits (189), Expect = 3e-17
 Identities = 45/195 (23%), Positives = 79/195 (40%), Gaps = 7/195 (3%)

Query: 1   MEESWGSGYKEYVAGLIAGVATVIVGHPFDTVKVKLQKHNTEVHGIRYKNGLHCTARIL- 59
            ++ W        +G  AG  ++   +P D  + +L     +    R   GL      + 
Sbjct: 104 HKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIF 163

Query: 60  RTEGVRGLYRGATPSFLGMAFESSLLFGIYSQTKQLLQGGVQSGGPQPNVIIPSAAFGGS 119
           +++G+RGLY+G   S  G+    +  FG+Y   K +L            +I        +
Sbjct: 164 KSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKNVHIIVSWMIA---QTVTA 220

Query: 120 IISFVLCPSELVKCRMQVQGTDSLVPKSVRYTSPLDCALRTVKQEGVMAIFRGGSTTFLR 179
           +   V  P + V+ RM +Q         + YT  +DC  +  K EG  A F+G  +  LR
Sbjct: 221 VAGLVSYPFDTVRRRMMMQSGRK--GADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLR 278

Query: 180 EAIGNAVFFSVYEHV 194
             +G A    +Y+ +
Sbjct: 279 -GMGGAFVLVLYDEI 292


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query277
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.98
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=1.1e-36  Score=265.38  Aligned_cols=225  Identities=17%  Similarity=0.266  Sum_probs=193.2

Q ss_pred             CCccchHHHHHHHHHHHHhhHhhcccHhHHHHHHhcCCCC---CCCcccCCHHHHHHHHHHhhchhhcccCcchhHHHHH
Q 023812            3 ESWGSGYKEYVAGLIAGVATVIVGHPFDTVKVKLQKHNTE---VHGIRYKNGLHCTARILRTEGVRGLYRGATPSFLGMA   79 (277)
Q Consensus         3 ~~~~~~~~~~~aG~~ag~~~~~i~~Pld~ik~rlq~~~~~---~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~l~~~~   79 (277)
                      |+..+..+++++|++|++++.+++||||+||+|+|+++..   .....+++.++.+++++++||+++||||+.+.+++..
T Consensus         1 ~~~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~   80 (292)
T d1okca_           1 DQALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYF   80 (292)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhh
Confidence            4556788999999999999999999999999999998643   2345689999999999999999999999999999999


Q ss_pred             HhhhHHHHHHHHHHHHHhCCCCCCCC---CchhHHHHHHHHHHHHHhhhccHHHHHHHHHhccCCCCCCCCCCCCCHHHH
Q 023812           80 FESSLLFGIYSQTKQLLQGGVQSGGP---QPNVIIPSAAFGGSIISFVLCPSELVKCRMQVQGTDSLVPKSVRYTSPLDC  156 (277)
Q Consensus        80 ~~~~~~f~~~~~~k~~l~~~~~~~~~---~~~~~~~ag~~Ag~~~~~v~~P~eviktrlq~~~~~~~~~~~~~y~~~~~~  156 (277)
                      +...++|..||.+++.+.+.......   .....+.+|.+||+++.++++|+|++|+|+|.+....  ...+.|.+..+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~--~~~~~~~~~~~~  158 (292)
T d1okca_          81 PTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG--AAQREFTGLGNC  158 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS--TTTCSCSSHHHH
T ss_pred             cccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeecccccc--ccccccccHHHH
Confidence            99999999999999998865433222   2334577899999999999999999999999987542  245578999999


Q ss_pred             HHHHHHhhhhhhcchhhHHhHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Q 023812          157 ALRTVKQEGVMAIFRGGSTTFLREAIGNAVFFSVYEHVRYYMHLKLKAASSDHSNLIDMGIGIVSGGLGGVAVSILTALH  236 (277)
Q Consensus       157 ~~~i~~~eGi~glyrG~~~~~lr~~p~~~i~f~~ye~lk~~~~~~~~~~~~~~~~~~~~~~~~~sg~~ag~~a~~~t~P~  236 (277)
                      +++++++||+++||+|+.++++|++|+++++|..||.+|+.+.+...         ......+++|.+++.+++++|+|.
T Consensus       159 ~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~---------~~~~~~~~~~~~~~~~a~~~t~P~  229 (292)
T d1okca_         159 ITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPKN---------VHIIVSWMIAQTVTAVAGLVSYPF  229 (292)
T ss_dssp             HHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGGC---------SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhcccccc---------cchHHHHHHHHHHHHHHhhccccH
Confidence            99999999999999999999999999999999999999976543211         245577899999999999999996


Q ss_pred             HH
Q 023812          237 FY  238 (277)
Q Consensus       237 ~~  238 (277)
                      .-
T Consensus       230 dv  231 (292)
T d1okca_         230 DT  231 (292)
T ss_dssp             HH
T ss_pred             HH
Confidence            43



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure