Citrus Sinensis ID: 023868

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270------
Protein Sequence
MLQTHHLLSLNFPFTVSHHPQKLNFLQKPTISLSAFPRRRPLIEPYCLAQAQEPTTNITAPTTSEEGPVELPQSIFATTDEPSSLQVATSVLLTGAISVFLFRALRRRAKRAKELKFRSSGAKKSLKDEALDNLKALGSSSIDAKGPPSPVQALLGGLTAGVIAIILYKFTTTIEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALNSFTEDSSSSKETENIGEQQSGSLNSTAENATDTELNSGKEDQSSDSRQ
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccEEEccccccccccccccccccccccccccccccEHHcccccccccccccccccccEEccccHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mlqthhllslnfpftvshhpqklnflqkptislsafprrrpliepyclaqaqepttnitapttseegpvelpqsifattdepsslQVATSVLLTGAISVFLFRALRRRAKRAKELKFRSSGAKKSLKDEALDNLKAlgsssidakgppspvqaLLGGLTAGVIAIILYKFTTTIEAALNrqtisdnfsvRQITITIRTIVNGLCYLATFVFGINSVGLFLYSgqlalnsftedssssketenigeqqsgslnstaenatdtelnsgkedqssdsrq
Flexible Loop (DISEMBL)
MLQTHHLLSLNFPFTVSHHPQKLNFLQKPTISLSAFPRRRPLIEPYCLAQAQEPTTNITAPTTSEEGPVELPQSIFATTDEPSSLQVATSVLLTGAISVFLFRALRRRAkrakelkfrssgakkslkdeALDNLKALgsssidakgppSPVQALLGGLTAGVIAIILYKFTTTIEAALnrqtisdnfsvRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALNSFTEDSSSSKETenigeqqsgslnstaenatdtelnsgkedqssdsrq
Low Complexity Region (SEG)
MLQTHHLLSLNFPFTVSHHPQKLNFLQKPTISLSAFPRRRPLIEPYCLAQAQEPTTNITAPTTSEEGPVELPQSIFATTDEPSSLQVATSVLLTGAISVflfralrrrakrakelkfrSSGAKKSLKDEALDNLKALGSSSIDAKGPPSPVQALLGGLTAGVIAIILYKFTTTIEAALNRQTISDNFSVRQititirtiVNGLCYLATFVFGINSVGLFLYSGQLALNSFTEDSSSSKETENIGEQQSGSLNSTAENATDTELNSGKEDQSSDSRQ
Disordered region (IsUnstruct)
*****HLLSLNFPFTVSHHPQKLNFLQKPTISLSAF************************************************LQVATSVLLTGAISVFLFRALRR********************************************QALLGGLTAGVIAIILYKFTTTIEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALN************************************************
Disordered Region (DISOPRED)
**********NFPFTVSHHPQKLNFLQK*************LIEPYCLAQAQEPT*************VELPQSIFATTDEPSSLQVATSVLLTGAISVFLFRALRR*********************************************ALLGGLTAGVIAIILYKFTTTIEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQL***************************************************
Disordered Region (DISEMBL)
MLQTHHLLSLNFPFTVSHHPQKLNFLQKPTISLSAFPRRRPLIEPYCLAQAQEPTTNITAPTTSEEGPVELPQSIFATTDEPSSLQVATSVLLTGAISVFLFRALRRRAKRAKELKFRSSGAKKSLKDEALDNLKALGSSSIDAKGPPSPVQALLGGLTAGVIAIILYKFTTTIEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALNSF**********************************************
Disordered Region (DISPRO)
***THHLLSLNFPFTVSHHPQKLNFLQKPTISLSAFPRRRPLIEPYCLAQAQE************EGPVELPQSIFATTDEPSSLQVATSVLLTGAISVFLFRALRRRAKRAKELKFRS********************SS**AKGPPSPVQALLGGLTAGVIAIILYKFTTTIEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALNSFT*********************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLQTHHLLSLNFPFTVSHHPQKLNFLQKPTISLSAFPRRRPLIEPYCLAQAQEPTTNITAPTTSEEGPVELPQSIFATTDEPSSLQVATSVLLTGAISVFLFRALRRRAKRAKELKFRSSGAKKSLKDEALDNLKALGSSSIDAKGPPSPVQALLGGLTAGVIAIILYKFTTTIEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALNSFTEDSSSSKETENIGEQQSGSLNSTAENATDTELNSGKEDQSSDSRQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	276
449457015	282	PREDICTED: uncharacterized protein LOC10	0.971	0.950	0.614	2e-81
225461564	277	PREDICTED: uncharacterized protein LOC10	0.920	0.916	0.632	1e-76
255564541	285	conserved hypothetical protein [Ricinus	0.989	0.957	0.614	5e-75
356544064	277	PREDICTED: uncharacterized protein LOC10	0.920	0.916	0.611	1e-74
224116710	211	predicted protein [Populus trichocarpa]	0.706	0.924	0.751	1e-71
118488906	238	unknown [Populus trichocarpa x Populus d	0.768	0.890	0.64	3e-67
21617902	266	unknown [Arabidopsis thaliana]	0.902	0.936	0.536	2e-66
18400636	266	uncharacterized protein [Arabidopsis tha	0.902	0.936	0.536	4e-66
297834372	261	hypothetical protein ARALYDRAFT_478942 [	0.898	0.950	0.521	2e-65
217072908	271	unknown [Medicago truncatula]	0.757	0.771	0.608	2e-63

>gi|449457015|ref|XP_004146244.1| PREDICTED: uncharacterized protein LOC101221005 [Cucumis sativus] gi|449495512|ref|XP_004159863.1| PREDICTED: uncharacterized LOC101221005 [Cucumis sativus]

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 174/283 (61%), Positives = 205/283 (72%), Gaps = 15/283 (5%)

Query: 1   MLQTHHLLSLNFP-FTVSHHPQKLN---FLQKPTISLSAFPRR------RPLIEPYCLAQ 50
           M  T +LLS NFP FT+S  P   N   FL  PT +LS+  R        PL    C   
Sbjct: 1   MWHTQNLLSSNFPLFTLS--PPTYNHKLFLSPPT-TLSSLHRPITFHSVSPLTNHRCFCL 57

Query: 51  AQEPTTNITAPTTSEEGPVELPQSIFATTDEPSSLQVATSVLLTGAISVFLFRALRRRAK 110
            Q  T    A    + GPVELP +IFATTD+PSSLQVATSVLLTGAISVFLFR+LRRRAK
Sbjct: 58  PQF-TDLADATFLDDNGPVELPPTIFATTDDPSSLQVATSVLLTGAISVFLFRSLRRRAK 116

Query: 111 RAKELKFRSSGAKKSLKDEALDNLKALGSSSIDAKGPPSPVQALLGGLTAGVIAIILYKF 170
           R KELKFRS G KKSLK+EA+D+LKA+ +  I++K  PSP+QA LG + AGVIA+ILYKF
Sbjct: 117 RVKELKFRSGGVKKSLKEEAMDSLKAISTGPIESKSTPSPIQAFLGAIAAGVIALILYKF 176

Query: 171 TTTIEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALNSF 230
           TTTIEA+LNRQT+SDNFSVRQ+TITIRTIVNGLCYLATFVFGIN++GLFLYSGQLA+NS 
Sbjct: 177 TTTIEASLNRQTVSDNFSVRQLTITIRTIVNGLCYLATFVFGINAIGLFLYSGQLAMNSV 236

Query: 231 TEDSSSSKETENIGEQQSGSLNSTAENATD-TELNSGKEDQSS 272
            E+ S   E +   ++Q     STAE   D TE ++ K+DQSS
Sbjct: 237 MEEGSKDTEPKAKSDEQVSPPTSTAETTLDSTESSNSKDDQSS 279

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225461564|ref|XP_002282834.1| PREDICTED: uncharacterized protein LOC100267434 [Vitis vinifera] gi|302142945|emb|CBI20240.3| unnamed protein product [Vitis vinifera]

 Score =  292 bits (747), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 174/275 (63%), Positives = 205/275 (74%), Gaps = 21/275 (7%)

Query: 6   HLLSLNFPFTVSHHPQKLNFLQKPTISLSAFPRRRPLIEPYCLAQAQEPTTNITAPTTSE 65
           H   L+ PF     P  L+      +S     R  PL+       AQ P T  TAP   E
Sbjct: 20  HNPCLSPPFCSLSRPTSLHL-----VSAHLRTRAEPLL-------AQVPDTTTTAP---E 64

Query: 66  EGPVELP---QSIFATTDEPSSLQVATSVLLTGAISVFLFRALRRRAKRAKELKFRSSGA 122
           EGP+ELP    SIFAT D+P+ LQVATSVLLTGAISVFLFR++RRR KRAKEL+FRSSG 
Sbjct: 65  EGPIELPPSSSSIFATNDDPTPLQVATSVLLTGAISVFLFRSIRRRVKRAKELRFRSSGV 124

Query: 123 KKSLKDEALDNLKALGSSSIDAKGPPSPVQALLGGLTAGVIAIILYKFTTTIEAALNRQT 182
           KK+LK+EALD+LKA+GS S+ A  PPSPVQALLGG+TAGVIA+ILYKFT TIEA+LNRQT
Sbjct: 125 KKTLKEEALDSLKAMGSGSVKA-APPSPVQALLGGITAGVIALILYKFTITIEASLNRQT 183

Query: 183 ISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALNSFTEDSSSSKETEN 242
           +SDNFSVRQITITIRTI+NGLCYLATFVFGINSVGLFLYSGQLALNSF E  S+S+ET+ 
Sbjct: 184 VSDNFSVRQITITIRTIINGLCYLATFVFGINSVGLFLYSGQLALNSFME-GSTSEETQI 242

Query: 243 IGEQQSGSLNSTAENATD-TELNSGKEDQSSDSRQ 276
            GE+Q  + N+  ++  D T+LNS + DQ +   Q
Sbjct: 243 KGEEQLSTPNTLTDSPPDGTQLNSSEGDQRAQDEQ 277

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255564541|ref|XP_002523266.1| conserved hypothetical protein [Ricinus communis] gi|223537479|gb|EEF39105.1| conserved hypothetical protein [Ricinus communis]

 Score =  286 bits (733), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 177/288 (61%), Positives = 211/288 (73%), Gaps = 15/288 (5%)

Query: 1   MLQTHHLLSLN--FPFTVSHHPQKLNF-----LQKPTISLSAFPRRRPLIEPYCLAQAQE 53
           ML  HH +     FP    HH             KPT SLS F    P  +P     ++ 
Sbjct: 1   MLHCHHYIPSPQFFPRNHHHHTSTPYLSLTSSFSKPT-SLSTF-SALPPSKPDIWLASEP 58

Query: 54  PTTNITAPTTSEEGPVELP----QSIFATTDEPSSLQVATSVLLTGAISVFLFRALRRRA 109
                 +P+  E+GP+ELP     SIFATTD+PS +QVATSVLLTG+I VFLFRALRRRA
Sbjct: 59  TPVTPPSPSPEEDGPIELPFPSSPSIFATTDDPSPIQVATSVLLTGSIGVFLFRALRRRA 118

Query: 110 KRAKELKFRSSGAKKSLKDEALDNLKALGSSSIDAKGPPSPVQALLGGLTAGVIAIILYK 169
           KRAKELKFRSSGAKK++K+EALD+LKA+GS+SIDA+ PPSP+Q  LGG++A VIA+ILYK
Sbjct: 119 KRAKELKFRSSGAKKTMKEEALDSLKAMGSASIDAQKPPSPLQTFLGGVSAAVIALILYK 178

Query: 170 FTTTIEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALNS 229
           FTTTIEAALNRQT+SDNFSVRQITIT+RTI+NGLCYLATFVFG+NSVGLFLYSGQLA+NS
Sbjct: 179 FTTTIEAALNRQTVSDNFSVRQITITVRTIINGLCYLATFVFGLNSVGLFLYSGQLAINS 238

Query: 230 FTEDSSSSKETENIGEQQSGSLNSTAENATD-TELNSGKEDQSSDSRQ 276
           F E S+S +     G +QSGSLNS  E+  D TE NS + DQ+ D+ Q
Sbjct: 239 FMEGSTSEESESK-GNEQSGSLNSAPESPIDSTESNSSQGDQNPDNSQ 285

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544064|ref|XP_003540475.1| PREDICTED: uncharacterized protein LOC100799393 [Glycine max]

 Score =  285 bits (730), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 176/288 (61%), Positives = 209/288 (72%), Gaps = 34/288 (11%)

Query: 5   HHLLSLNFPFTVSHHPQK--LNFL----QKPTI----SLSAFPRRRPLIEPYCLAQAQEP 54
           HHLL   FP T++HH  K  L+ L     KPTI    S SA P       P+    A   
Sbjct: 8   HHLL---FPLTLAHHKVKPPLSILPPLHHKPTILHSVSASAIP-------PWAAQLADAA 57

Query: 55  TTNITAPTTSEEGPVELP----QSIFATTDEPSSLQVATSVLLTGAISVFLFRALRRRAK 110
               T      EGPVELP     SIFAT+D+PS +QVA+SVLLTGA+SVFLFR+LRRRA+
Sbjct: 58  ADIDT------EGPVELPFSSTPSIFATSDDPSPIQVASSVLLTGAVSVFLFRSLRRRAQ 111

Query: 111 RAKELKFRSSGAKKSLKDEALDNLKALGSSSIDAK-GPPSPVQALLGGLTAGVIAIILYK 169
           R K+ +FRSSG +KS+K+EALD+LKA+GS+S+ AK    SPVQALLGG++AGVIA+ILYK
Sbjct: 112 RVKQSQFRSSG-EKSIKEEALDSLKAMGSASVKAKEDSASPVQALLGGISAGVIALILYK 170

Query: 170 FTTTIEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALNS 229
           F TTIEAALNRQTISDNFSVRQITITIRTIVNGL YLATFVFG+NS+GLFLYSGQLAL S
Sbjct: 171 FATTIEAALNRQTISDNFSVRQITITIRTIVNGLTYLATFVFGLNSLGLFLYSGQLALKS 230

Query: 230 FTEDSSSSKETENIGEQQSGSLNSTAENATD-TELNSGKEDQSSDSRQ 276
              D S+ KETE+    Q    NS+ E++TD TEL+S KE+QSS+  Q
Sbjct: 231 IMGD-STEKETESKSTDQPNLSNSSNESSTDKTELSSRKEEQSSNDAQ 277

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116710|ref|XP_002317372.1| predicted protein [Populus trichocarpa] gi|222860437|gb|EEE97984.1| predicted protein [Populus trichocarpa]

 Score =  275 bits (704), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 148/197 (75%), Positives = 172/197 (87%), Gaps = 2/197 (1%)

Query: 74  SIFATTDEPSSLQVATSVLLTGAISVFLFRALRRRAKRAKELKFRSSGAKKSLKDEALDN 133
           SIFAT+D+PSS+QVATSVLLTGAISVFLFR+LRRRAKR+KELKFRSSGAKK+LK+EALD+
Sbjct: 16  SIFATSDDPSSIQVATSVLLTGAISVFLFRSLRRRAKRSKELKFRSSGAKKTLKEEALDS 75

Query: 134 LKALGSSSIDAKGPPSPVQALLGGLTAGVIAIILYKFTTTIEAALNRQTISDNFSVRQIT 193
           LK  GS+ ID K PPSPVQA LG ++AGVIA+ILYKF+TTIEA+LNRQT+SDNFSVRQIT
Sbjct: 76  LKTFGSAPIDVKKPPSPVQAFLGAISAGVIALILYKFSTTIEASLNRQTVSDNFSVRQIT 135

Query: 194 ITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALNSFTEDSSSSKETENIGEQQSGSLNS 253
           IT+RTIVNGLCYLATFVFGINSVGLFLYS QLA NS  E + + + TE+    QSGS NS
Sbjct: 136 ITVRTIVNGLCYLATFVFGINSVGLFLYSAQLAFNSLME-AGTDEVTESTTSGQSGSSNS 194

Query: 254 TAENATD-TELNSGKED 269
           T+++ATD  EL S + D
Sbjct: 195 TSDSATDGAELTSSQGD 211

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488906|gb|ABK96262.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  261 bits (666), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 144/225 (64%), Positives = 168/225 (74%), Gaps = 13/225 (5%)

Query: 2   LQTHHLLSLN---FPFT---VSHHPQKLNFLQKPTI----SLSAFPRRRPLIEPYCLAQA 51
           LQ H+   L+   FP +    +HH   L FL +P I    +LSA PR RP   P  LAQ 
Sbjct: 4   LQCHNFHPLSPQIFPLSHHHTNHHLYPLKFLYRPPIFTPFTLSALPRSRP-DPPLWLAQL 62

Query: 52  QEPTTNITAPTTSEEGPVELPQSIFATTDEPSSLQVATSVLLTGAISVFLFRALRRRAKR 111
            E               +    SIFAT+D+PSS+QVATSVLLTGAISVFLFR+LRRRAKR
Sbjct: 63  PEQAPEPEE--EGPIEILRSSPSIFATSDDPSSIQVATSVLLTGAISVFLFRSLRRRAKR 120

Query: 112 AKELKFRSSGAKKSLKDEALDNLKALGSSSIDAKGPPSPVQALLGGLTAGVIAIILYKFT 171
           +KELKFRSSGAKK+LK+EALD+LK  GS+ ID K PPSPVQA LG ++AGVIA+ILYKFT
Sbjct: 121 SKELKFRSSGAKKTLKEEALDSLKTFGSAPIDVKKPPSPVQAFLGAISAGVIALILYKFT 180

Query: 172 TTIEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVFGINSV 216
           TTIEA+LNRQT+SDNFSVRQIT+T+RTIVNGLCYLATFVFGINS+
Sbjct: 181 TTIEASLNRQTVSDNFSVRQITVTVRTIVNGLCYLATFVFGINSL 225

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21617902|gb|AAM66952.1| unknown [Arabidopsis thaliana]

 Score =  258 bits (659), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 153/285 (53%), Positives = 192/285 (67%), Gaps = 36/285 (12%)

Query: 1   MLQTHHLLSLNFPFTVSHHPQKLNFLQKPTISLSAFPRRRPLIEPYCLAQAQEPTTNITA 60
           +LQ+H  L  + P+ +   P +L     P  SLS+F R RP I    L+  +E       
Sbjct: 3   VLQSHQCL-FSLPYRL--RPTRL---ISPIHSLSSFTRIRPGI--IRLSAVKEIAD---V 51

Query: 61  PTTSEEGPVELPQS----------IFATTDEPSSLQVATSVLLTGAISVFLFRALRRRAK 110
               E+GP+ELP S          IFAT+D+P+ LQ+ATSVLLTGAI+VFL R++RRRAK
Sbjct: 52  AEVEEDGPIELPTSSTSPFSSTNSIFATSDDPTPLQLATSVLLTGAITVFLIRSVRRRAK 111

Query: 111 RAKELKFRSSGAKKSLKDEALDNLKALGSSSIDA-KGPPSPVQALLGGLTAGVIAIILYK 169
           RAKEL+FRS+GAKKSLK+EA+DNLKAL S+ I+     PS  QA LG + AGVIA+ILYK
Sbjct: 112 RAKELQFRSTGAKKSLKEEAMDNLKALSSTPIEGGNSTPSAAQAFLGAIAAGVIALILYK 171

Query: 170 FTTTIEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALNS 229
           FT T+E+ LNRQTISDNFSVRQIT+T+RTI+NG+CYLATFVFG+N+ GL LYSGQLA N 
Sbjct: 172 FTVTVESGLNRQTISDNFSVRQITVTVRTIINGICYLATFVFGLNAFGLLLYSGQLAFN- 230

Query: 230 FTEDSSSS--KETENIGEQQSGSLNSTAENATDTELNSGKEDQSS 272
             EDS+    K T   G+  SG          ++E+N   EDQSS
Sbjct: 231 --EDSAEENMKATTQPGDSSSGD---------NSEVNKSNEDQSS 264

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18400636|ref|NP_566500.1| uncharacterized protein [Arabidopsis thaliana] gi|87116616|gb|ABD19672.1| At3g15110 [Arabidopsis thaliana] gi|332642098|gb|AEE75619.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  257 bits (656), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 153/285 (53%), Positives = 191/285 (67%), Gaps = 36/285 (12%)

Query: 1   MLQTHHLLSLNFPFTVSHHPQKLNFLQKPTISLSAFPRRRPLIEPYCLAQAQEPTTNITA 60
           +LQ+H  L  + P+ +   P +L     P  SLS+F R RP I    L+  +E       
Sbjct: 3   VLQSHQCL-FSLPYRL--RPTRL---ISPIHSLSSFTRIRPGI--IRLSAVKEIAD---V 51

Query: 61  PTTSEEGPVELPQS----------IFATTDEPSSLQVATSVLLTGAISVFLFRALRRRAK 110
               E+GP+ELP S          IFAT+D+P+ LQ+ATSVLLTGAI+VFL R++RRRAK
Sbjct: 52  AEVEEDGPIELPTSSTSPFSSTNSIFATSDDPTPLQLATSVLLTGAITVFLIRSVRRRAK 111

Query: 111 RAKELKFRSSGAKKSLKDEALDNLKALGSSSIDA-KGPPSPVQALLGGLTAGVIAIILYK 169
           RAKEL FRS+GAKKSLK+EA+DNLKAL S+ I+     PS  QA LG + AGVIA+ILYK
Sbjct: 112 RAKELTFRSTGAKKSLKEEAMDNLKALSSTPIEGGNSTPSAAQAFLGAIAAGVIALILYK 171

Query: 170 FTTTIEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALNS 229
           FT T+E+ LNRQTISDNFSVRQIT+T+RTI+NG+CYLATFVFG+N+ GL LYSGQLA N 
Sbjct: 172 FTVTVESGLNRQTISDNFSVRQITVTVRTIINGICYLATFVFGLNAFGLLLYSGQLAFN- 230

Query: 230 FTEDSSSS--KETENIGEQQSGSLNSTAENATDTELNSGKEDQSS 272
             EDS+    K T   G+  SG          ++E+N   EDQSS
Sbjct: 231 --EDSAEENMKATTQPGDSSSGD---------NSEVNKSNEDQSS 264

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297834372|ref|XP_002885068.1| hypothetical protein ARALYDRAFT_478942 [Arabidopsis lyrata subsp. lyrata] gi|297330908|gb|EFH61327.1| hypothetical protein ARALYDRAFT_478942 [Arabidopsis lyrata subsp. lyrata]

 Score =  255 bits (651), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 147/282 (52%), Positives = 187/282 (66%), Gaps = 34/282 (12%)

Query: 1   MLQTHHLLSLNFPFTVSHHPQKLNFLQKPTISLSAFPRRRPLIEPYCLAQAQEPTTNITA 60
           +LQ+H        FT+ H  +    +  P  SLS+F R RP  +   ++  +E       
Sbjct: 3   VLQSHQC-----RFTLPHRLRPTRLIS-PIHSLSSFTRIRP--DRIRVSVVKEIAD---V 51

Query: 61  PTTSEEGPVELPQS----------IFATTDEPSSLQVATSVLLTGAISVFLFRALRRRAK 110
               E+GP+ELP S          IFAT+D+P+ LQ+ATSVLLTGAI+VFL R++RRRAK
Sbjct: 52  AEVEEDGPIELPPSSTSPFSSTNSIFATSDDPTPLQLATSVLLTGAITVFLIRSVRRRAK 111

Query: 111 RAKELKFRSSGAKKSLKDEALDNLKALGSSSIDA-KGPPSPVQALLGGLTAGVIAIILYK 169
           RAKEL+FRS+GAKKSLK+EA+DNLKALGS+ I+     PS  QA LG + AGVIA+ILYK
Sbjct: 112 RAKELRFRSTGAKKSLKEEAMDNLKALGSTPIEGGNSTPSAAQAFLGAIAAGVIALILYK 171

Query: 170 FTTTIEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALNS 229
           FT T+E+ LNRQTISDNFSVRQIT+T+RTI+NG+CYLATFVFG+N+ GL LY+GQLA N 
Sbjct: 172 FTVTVESGLNRQTISDNFSVRQITVTVRTIINGICYLATFVFGLNAFGLLLYAGQLAFN- 230

Query: 230 FTEDSSSSKETENIGEQQSGSLNSTAENATDTELNSGKEDQS 271
             EDS    +     E  SG          ++E+N   EDQS
Sbjct: 231 --EDSDEDMKATTQPEDSSGD---------NSEVNKSNEDQS 261

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072908|gb|ACJ84814.1| unknown [Medicago truncatula]

 Score =  248 bits (634), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 132/217 (60%), Positives = 167/217 (76%), Gaps = 8/217 (3%)

Query: 66  EGPVELPQ----SIFATTDEPSSLQVATSVLLTGAISVFLFRALRRRAKRAKELKFRSSG 121
           +GP+E+P     S+ ++TD+PS +Q+A S+LLTGAISV LFR+ RRRAKR K+ +FRSSG
Sbjct: 57  DGPIEIPYDSTPSLLSSTDDPSFIQIAASLLLTGAISVLLFRSFRRRAKRLKQTQFRSSG 116

Query: 122 AKKSLKDEALDNLKALGSSSIDA-KGPPSPVQALLGGLTAGVIAIILYKFTTTIEAALNR 180
            +KS+K+EAL+ LKA G++SI+  KGPPSPVQ  LG ++AGVI++ILYKF T IEA L+R
Sbjct: 117 -EKSVKEEALETLKATGTASIETTKGPPSPVQTFLGAISAGVISLILYKFATIIEAGLSR 175

Query: 181 QTISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQLALNSFTEDSSSSKET 240
           QTISD+FS RQITIT+RTI+NGL YLATF+FG+NS+GL LYSGQLAL SFT D S  KET
Sbjct: 176 QTISDDFSARQITITVRTIINGLTYLATFIFGLNSLGLLLYSGQLALKSFTGD-SIEKET 234

Query: 241 ENIGEQQSGSLNSTAE-NATDTELNSGKEDQSSDSRQ 276
           EN    QS   N + E    D EL+   E+QSS+  Q
Sbjct: 235 ENKSADQSSLSNLSVETRINDAELSGRSEEQSSNDAQ 271

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	276
TAIR|locus:2083676	266	AT3G15110 "AT3G15110" [Arabido	0.902	0.936	0.470	2e-49

TAIR|locus:2083676 AT3G15110 "AT3G15110" [Arabidopsis thaliana (taxid:3702)]

 Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
 Identities = 134/285 (47%), Positives = 168/285 (58%)

Query:     1 MLQTHHLLSLNFPFTVSHHPQKLNFLQKPTISLSAFPRRRPLIEPYCLAQAQEPTTNITA 60
             +LQ+H  L  + P+ +   P +L     P  SLS+F R RP I    L+  +E   ++  
Sbjct:     3 VLQSHQCL-FSLPYRL--RPTRLI---SPIHSLSSFTRIRPGI--IRLSAVKE-IADVAE 53

Query:    61 PTTSEEGPVELP----------QSIFATTDEPSSLQVATSVLLTGAISVXXXXXXXXXXX 110
                 E+GP+ELP           SIFAT+D+P+ LQ+ATSVLLTGAI+V           
Sbjct:    54 --VEEDGPIELPTSSTSPFSSTNSIFATSDDPTPLQLATSVLLTGAITVFLIRSVRRRAK 111

Query:   111 XXXXXXXXSSGAKKSLKDEALDNLKALGSSSIDA-KGPPSPVQALLGGLTAGVIAIILYK 169
                     S+GAKKSLK+EA+DNLKAL S+ I+     PS  QA LG + AGVIA+ILYK
Sbjct:   112 RAKELTFRSTGAKKSLKEEAMDNLKALSSTPIEGGNSTPSAAQAFLGAIAAGVIALILYK 171

Query:   170 FTTTIEAALNRQTISDNFSVRQXXXXXXXXVNGLCYLATFVFGINSVGLFLYSGQLALNS 229
             FT T+E+ LNRQTISDNFSVRQ        +NG+CYLATFVFG+N+ GL LYSGQLA N 
Sbjct:   172 FTVTVESGLNRQTISDNFSVRQITVTVRTIINGICYLATFVFGLNAFGLLLYSGQLAFN- 230

Query:   230 FTEDSSSS--KETENIGEQQSGSLNSTAENATDTELNSGKEDQSS 272
               EDS+    K T   G+  SG  NS        E+N   EDQSS
Sbjct:   231 --EDSAEENMKATTQPGDSSSGD-NS--------EVNKSNEDQSS 264


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.126   0.343    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      276       249   0.00080  114 3  11 23  0.39    34
                                                     32  0.46    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  557 (59 KB)
  Total size of DFA:  142 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.64u 0.17s 21.81t   Elapsed:  00:00:01
  Total cpu time:  21.64u 0.17s 21.81t   Elapsed:  00:00:01
  Start:  Sat May 11 00:43:38 2013   End:  Sat May 11 00:43:39 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	276
pfam11282	82	pfam11282, DUF3082, Protein of unknown function (D	2e-15

>gnl|CDD|192735 pfam11282, DUF3082, Protein of unknown function (DUF3082)

 Score = 69.6 bits (171), Expect = 2e-15
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 1/82 (1%)

Query: 147 PPSPVQALLGGLTAGVIAIILYKFTTTIEAALNRQTI-SDNFSVRQITITIRTIVNGLCY 205
              P+  L G LT+G++A +LY  +++I      +   S +  V+ I   +RT+V GLC+
Sbjct: 1   KKGPLSCLSGALTSGLLAWLLYFLSSSIATYFAAKPPHSSSPIVQSIASAVRTLVVGLCF 60

Query: 206 LATFVFGINSVGLFLYSGQLAL 227
           LATF F    +GL L   Q   
Sbjct: 61  LATFSFAFVGLGLILLFIQSLF 82

This family of proteins has no known function. Length = 82

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	276
PF11282	82	DUF3082: Protein of unknown function (DUF3082); In	99.97
PF03899	100	ATP_synt_I: ATP synthase I chain; InterPro: IPR005	85.5

>PF11282 DUF3082: Protein of unknown function (DUF3082); InterPro: IPR021434 This family of proteins has no known function

Probab=99.97  E-value=1.8e-31  Score=208.45  Aligned_cols=81  Identities=44%  Similarity=0.739  Sum_probs=78.5

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 023868          147 PPSPVQALLGGLTAGVIAIILYKFTTTIEAALN-RQTISDNFSVRQITITIRTIVNGLCYLATFVFGINSVGLFLYSGQL  225 (276)
Q Consensus       147 ~~tPLq~L~GAliAgvlA~llY~LT~sI~asF~-~p~~SdN~~A~~Ia~aVRTLVvGL~yLATFiFa~~alGL~LLaIQL  225 (276)
                      +|||+|||+||++||++||++|++|++|+++|+ +|..+||+.|+||+++|||+|+|+||||||+||++++||++|++|+
T Consensus         1 ~~~Pl~~l~Ga~~ag~la~~ly~lt~~i~~~fa~~p~~s~~~~a~~Ia~~vRTlv~Gl~~LaTfiF~~~~lGL~ll~iql   80 (82)
T PF11282_consen    1 KPTPLRCLSGALIAGGLAYGLYFLTTSIAASFASKPIHSSNYIAQNIASAVRTLVVGLCYLATFIFGFVALGLFLLFIQL   80 (82)
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999995 8888999999999999999999999999999999999999999999


Q ss_pred             hh
Q 023868          226 AL  227 (276)
Q Consensus       226 l~  227 (276)
                      ++
T Consensus        81 l~   82 (82)
T PF11282_consen   81 LF   82 (82)
T ss_pred             hC
Confidence            85

>PF03899 ATP_synt_I: ATP synthase I chain; InterPro: IPR005598 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane

Probab=85.50  E-value=13  Score=27.72  Aligned_cols=68  Identities=22%  Similarity=0.310  Sum_probs=42.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH
Q 023868          151 VQALLGGLTAGVIAIILYKFTTTIEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVF--GINSVGLF  219 (276)
Q Consensus       151 Lq~L~GAliAgvlA~llY~LT~sI~asF~~p~~SdN~~A~~Ia~aVRTLVvGL~yLATFiF--a~~alGL~  219 (276)
                      +.++.|++++..-.+.+.+.........++ ...........+..+|-++.++.+...+-+  .++-+|++
T Consensus        27 ~s~~~G~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~R~~l~~~~~~~~~~~~~~~~~~~~~   96 (100)
T PF03899_consen   27 LSFLLGGLISLLNFFLLARRVFRLAGALAM-DPGRAVRAMYLGYFIRLALTILLFILAFKFPPELNPIALL   96 (100)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHH
Confidence            456666666665555555555444444333 122233335688999999999988888888  56665554

ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. F-ATPases (also known as F1F0-ATPase, or H(+)-transporting two-sector ATPase) (3.6.3.14 from EC) are composed of two linked complexes: the F1 ATPase complex is the catalytic core and is composed of 5 subunits (alpha, beta, gamma, delta, epsilon), while the F0 ATPase complex is the membrane-embedded proton channel that is composed of at least 3 subunits (A-C), nine in mitochondria (A-G, F6, F8). Both the F1 and F0 complexes are rotary motors that are coupled back-to-back. In the F1 complex, the central gamma subunit forms the rotor inside the cylinder made of the alpha(3)beta(3) subunits, while in the F0 complex, the ring-shaped C subunits forms the rotor. The two rotors rotate in opposite directions, but the F0 rotor is usually stronger, using the force from the proton gradient to push the F1 rotor in reverse in order to drive ATP synthesis []. These ATPases can also work in reverse to hydrolyse ATP to create a proton gradient. The atp operon of most prokaryotes contains the structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein of unknown function. A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex []. A role in magnesium uptake has also been suggested []. More information about this protein can be found at Protein of the Month: ATP synthases [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	276
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 5e-05
 Identities = 39/238 (16%), Positives = 66/238 (27%), Gaps = 55/238 (23%)

Query: 2   LQTHHLLSLNFPFTVSHHPQKLNFLQKPTISLSAFPRRRPLIEPYCLAQAQEPTTNITAP 61
             ++ +      F +      L     P   L    +    I+P       + ++NI   
Sbjct: 171 CLSYKVQC-KMDFKI--FWLNLKNCNSPETVLEMLQKLLYQIDPN-WTSRSDHSSNI--K 224

Query: 62  TTSEEGPVELPQSIFATTDEPSSLQVATSVLLTGAISVFLF--RAL---RRRA-----KR 111
                   EL + +  +    + L V  +V    A + F    + L   R +        
Sbjct: 225 LRIHSIQAEL-RRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSA 283

Query: 112 AKELKFRSSGAKKSL-KDEALDNL-KALGSSSIDAKGPPSPVQALLGG-LTAGVIA---- 164
           A            +L  DE    L K L     D      P + L        +IA    
Sbjct: 284 ATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD-----LPREVLTTNPRRLSIIAESIR 338

Query: 165 -----------IILYKFTTTIEAALNRQTISDNFSVRQITITIRTIVNGLCYLATFVF 211
                      +   K TT IE++LN    ++    R+             +    VF
Sbjct: 339 DGLATWDNWKHVNCDKLTTIIESSLNVLEPAE---YRK------------MFDRLSVF 381

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00