Citrus Sinensis ID: 023882

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270------
Protein Sequence
MQEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLDAHAIWHATTIPLTYIWWSFIRDDAEFQTANMLKKAK
Secondary Structure (PSIPRED)
ccccccHHHcccccccccccHHHHHHHHHHHHccccccEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHccccccccccHHHHHHHHHHHHcccccccEcccccHHHHEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mqeplylqwkkwdclsdcryncmvDREIkrdalghgpvkyhgkwpfirvygiqepasVAFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHsrdvdltekfdYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWagitrhpsrwKLWVVVFGGALAMLLEiydfppyygfldahaIWHATTIPLTYIWWSFIRDDAEFQTANMLKKAK
Flexible Loop (DISEMBL)
mqeplylqwkkwdclsDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLDAHAIWHATTIPLTYIWWSFIRDDAEFQTANMLKKAK
Low Complexity Region (SEG)
MQEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLDAHAIWHATTIPLTYIWWSFIRDDAEFQTANMLKKAK
Disordered region (IsUnstruct)
****LYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLDAHAIWHATTIPLTYIWWSFIRDDAEF**********
Disordered Region (DISOPRED)
*QEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSVLNLAMHFHGWLSFFILLYYKL******KAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLDAHAIWHATTIPLTYIWWSFIRDDAEFQTANM*****
Disordered Region (DISEMBL)
MQEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLDAHAIWHATTIPLTYIWWSFIRDDAEFQT********
Disordered Region (DISPRO)
*QEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLDAHAIWHATTIPLTYIWWSFIRDDAEFQTANML****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLDAHAIWHATTIPLTYIWWSFIRDDAEFQTANMLKKAK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	276	2.2.26 [Sep-21-2011]
Q0VFE3	316	Post-GPI attachment to pr	yes	no	0.905	0.791	0.365	2e-40
A2A559	320	Post-GPI attachment to pr	yes	no	0.894	0.771	0.372	3e-40
A8WFS8	316	Post-GPI attachment to pr	yes	no	0.913	0.797	0.367	5e-40
Q68EV0	317	Post-GPI attachment to pr	N/A	no	0.905	0.788	0.373	8e-40
Q96FM1	320	Post-GPI attachment to pr	yes	no	0.905	0.781	0.365	2e-38
A2V7M9	320	Post-GPI attachment to pr	yes	no	0.902	0.778	0.363	4e-38
A7YWP2	319	Post-GPI attachment to pr	yes	no	0.960	0.830	0.355	1e-37
Q9P6N9	331	Protein PER1 homolog OS=S	yes	no	0.949	0.791	0.348	2e-37
Q7K0P4	326	Post-GPI attachment to pr	yes	no	0.905	0.766	0.328	2e-35
P25625	357	Protein PER1 OS=Saccharom	yes	no	0.913	0.705	0.295	8e-22

>sp|Q0VFE3|PGAP3_XENTR Post-GPI attachment to proteins factor 3 OS=Xenopus tropicalis GN=pgap3 PE=2 SV=1

 Score =  166 bits (420), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/268 (36%), Positives = 142/268 (52%), Gaps = 18/268 (6%)

Query: 2   QEPLYLQWKKWDCLSDCRYNCM---VDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASV 58
           ++PLY++   W CL DCRY CM   V   +K    GH   ++HGKWPF R    QEPAS 
Sbjct: 47  EQPLYMRVTGWTCLDDCRYQCMWYTVSLYLKE---GHEVPQFHGKWPFSRFLFFQEPASA 103

Query: 59  AFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHS 118
             S LN      G  S  +LL Y+  +  + + Y         +  +S+N+WFWS +FH+
Sbjct: 104 LASFLN------GVASLLMLLRYRSSVPSSCQMYRTCLA----FSMVSVNAWFWSTIFHT 153

Query: 119 RDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYK 178
           RD  LTEK DY  A +++  S+ L  +R+F ++  +      A L+     H+ YL   +
Sbjct: 154 RDTALTEKMDYFCASSVILHSIYLCCMRTFGLQYPSIANGFGAFLVLLFACHVSYLTLGR 213

Query: 179 LDYGWNMKVCVVMAVAQLLIWATWAGITR--HPSRWKLWVVVFGGALAMLLEIYDFPPYY 236
            DY +NM       V  L+ W  W    R   P  WK  +VV       LLE+ DFPP  
Sbjct: 214 FDYSYNMAANTGFGVLNLMWWLAWCFRRRFHQPYLWKCVLVVISLQSLALLELLDFPPVM 273

Query: 237 GFLDAHAIWHATTIPLTYIWWSFIRDDA 264
             LDAHA+WH +T+PL ++++SF++DD+
Sbjct: 274 WILDAHALWHFSTVPLHFLFYSFLKDDS 301

Involved in the lipid remodeling steps of GPI-anchor maturation.
Xenopus tropicalis (taxid: 8364)

>sp|A2A559|PGAP3_MOUSE Post-GPI attachment to proteins factor 3 OS=Mus musculus GN=Pgap3 PE=2 SV=1

 Score =  165 bits (418), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/271 (37%), Positives = 146/271 (53%), Gaps = 24/271 (8%)

Query: 2   QEPLYLQWKKWDCLSDCRYNCM---VDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASV 58
           ++P+Y+    W C  DC+Y CM   V   ++    GH   ++HGKWPF R   IQEPAS 
Sbjct: 52  RQPIYMSLAGWTCRDDCKYECMWFTVGLYLQE---GHRVPQFHGKWPFSRFLFIQEPASA 108

Query: 59  AFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHI---YGFLSMNSWFWSAV 115
             S+LN      G  S  +L  Y+  +  +       SP++H    + ++S+N+WFWS V
Sbjct: 109 VASLLN------GLASLVMLCRYRASVPAS-------SPMYHTCMAFAWVSLNAWFWSTV 155

Query: 116 FHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLN 175
           FH+RD DLTEK DY  A A++  S+ L  +R+  ++  +      A LL  +T HI YL+
Sbjct: 156 FHTRDTDLTEKMDYFCASAVILHSVYLCCVRTVGLQHPSVASAFGALLLLLLTGHISYLS 215

Query: 176 FYKLDYGWNMKVCVVMAVAQLLIWATWAGITRH--PSRWKLWVVVFGGALAMLLEIYDFP 233
               DYG+NM   V + +  L  W  W    R   P   +  VVV       LLE+ DFP
Sbjct: 216 LVHFDYGYNMMANVAIGLVNLAWWLVWCLRNRQRLPHTRRCMVVVVLLQGLSLLELLDFP 275

Query: 234 PYYGFLDAHAIWHATTIPLTYIWWSFIRDDA 264
           P +  LDAHAIWH +TIP+  +++ F+ DD+
Sbjct: 276 PLFWVLDAHAIWHISTIPVHTLFFRFLEDDS 306

Involved in the lipid remodeling steps of GPI-anchor maturation. Lipid remodeling steps consist in the generation of 2 saturated fatty chains at the sn-2 position of GPI-anchors proteins. Required for phospholipase A2 activity that removes an acyl-chain at the sn-2 position of GPI-anchors during the remodeling of GPI.

Mus musculus (taxid: 10090)

>sp|A8WFS8|PGAP3_DANRE Post-GPI attachment to proteins factor 3 OS=Danio rerio GN=pgap3 PE=2 SV=1

 Score =  164 bits (416), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 97/264 (36%), Positives = 142/264 (53%), Gaps = 12/264 (4%)

Query: 3   EPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSV 62
           +P Y+    W C  DCRY CM        A G+   ++HGKWPF R    +EPAS   S+
Sbjct: 49  QPPYMALTGWTCRDDCRYQCMWTTVGLYQAEGYSIPQFHGKWPFARFLCFEEPASALASL 108

Query: 63  LNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVD 122
           LN      G     +LL Y+  +      Y+  +     +  +S+N+WFWS VFH+RD  
Sbjct: 109 LN------GLACLLMLLRYRSAVPCQSPMYHTITA----FSLVSLNAWFWSTVFHTRDTY 158

Query: 123 LTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYG 182
           LTEK DY  A A++ +S+ L  +R+  +R  A   MV   L+   T+H+ YL F   DYG
Sbjct: 159 LTEKMDYFCASAVILYSIYLCCVRTLGLRRPAISSMVGVLLILAFTSHVSYLTFVSFDYG 218

Query: 183 WNMKVCVVMAVAQLLIWATWAGITRH--PSRWKLWVVVFGGALAMLLEIYDFPPYYGFLD 240
           +NM     + +  LL W  W  + R   P  W+  +VV       LLE+ DFPP +  LD
Sbjct: 219 YNMAANASIGIINLLWWLCWCWLNRRILPYWWRCGMVVLLLHGLALLELLDFPPLFWVLD 278

Query: 241 AHAIWHATTIPLTYIWWSFIRDDA 264
           AHA+WH +T+P+ ++++SF+ DD+
Sbjct: 279 AHAVWHLSTVPVHFLFYSFLIDDS 302

Involved in the lipid remodeling steps of GPI-anchor maturation.

Danio rerio (taxid: 7955)

>sp|Q68EV0|PGAP3_XENLA Post-GPI attachment to proteins factor 3 OS=Xenopus laevis GN=pgap3 PE=2 SV=1

 Score =  164 bits (414), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 100/268 (37%), Positives = 141/268 (52%), Gaps = 18/268 (6%)

Query: 2   QEPLYLQWKKWDCLSDCRYNCM---VDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASV 58
           Q+PLY++   W CL DCRY CM   V   +K    GH   ++HGKWPF R    QEPAS 
Sbjct: 47  QQPLYMRLTGWTCLDDCRYKCMWYTVSLYLKE---GHEVPQFHGKWPFSRFLFFQEPASA 103

Query: 59  AFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHS 118
             S LN      G  S  +L  Y+  +  + + Y         +  +S+N+WFWS +FH+
Sbjct: 104 LASFLN------GVASLLMLFRYRSSVPSSCQMYRTCLA----FSMVSVNAWFWSTIFHT 153

Query: 119 RDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYK 178
           RD  LTEK DY  A +++  S+ L  +R+F ++  +      A L+     HI YL   +
Sbjct: 154 RDTALTEKMDYFCASSVILHSIYLCCMRTFGLQYPSIANAFGAFLVLLFACHISYLTLGR 213

Query: 179 LDYGWNMKVCVVMAVAQLLIWATWAGITR--HPSRWKLWVVVFGGALAMLLEIYDFPPYY 236
            DY +NM       +  L+ W  W    R   P  WK  +VV       LLE+ DFPP  
Sbjct: 214 FDYSYNMAANTSFGIVNLMWWLAWCMWRRFHQPYLWKCVLVVVLLQSLALLELLDFPPVM 273

Query: 237 GFLDAHAIWHATTIPLTYIWWSFIRDDA 264
             LDAHA+WH +TIPL ++++SF+RDD+
Sbjct: 274 WILDAHALWHFSTIPLHFLFYSFLRDDS 301

Involved in the lipid remodeling steps of GPI-anchor maturation.

Xenopus laevis (taxid: 8355)

>sp|Q96FM1|PGAP3_HUMAN Post-GPI attachment to proteins factor 3 OS=Homo sapiens GN=PGAP3 PE=2 SV=2

 Score =  159 bits (402), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/268 (36%), Positives = 143/268 (53%), Gaps = 18/268 (6%)

Query: 2   QEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFS 61
           ++P+Y+    W C  DC+Y CM          GH   ++HGKWPF R    QEPAS   S
Sbjct: 52  RQPIYMSLAGWTCRDDCKYECMWVTVGLYLQEGHKVPQFHGKWPFSRFLFFQEPASAVAS 111

Query: 62  VLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHI---YGFLSMNSWFWSAVFHS 118
            LN      G  S  +L  Y+  +  +       SP++H    + ++S+N+WFWS VFH+
Sbjct: 112 FLN------GLASLVMLCRYRTFVPAS-------SPMYHTCVAFAWVSLNAWFWSTVFHT 158

Query: 119 RDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYK 178
           RD DLTEK DY  A  ++  S+ L  +R+  ++  A      A LL  +T H+ YL+  +
Sbjct: 159 RDTDLTEKMDYFCASTVILHSIYLCCVRTVGLQHPAVVSAFRALLLLMLTVHVSYLSLIR 218

Query: 179 LDYGWNMKVCVVMAVAQLLIWATWA--GITRHPSRWKLWVVVFGGALAMLLEIYDFPPYY 236
            DYG+N+   V + +  ++ W  W      R P   K  VVV       LLE+ DFPP +
Sbjct: 219 FDYGYNLVANVAIGLVNVVWWLAWCLWNQRRLPHVRKCVVVVLLLQGLSLLELLDFPPLF 278

Query: 237 GFLDAHAIWHATTIPLTYIWWSFIRDDA 264
             LDAHAIWH +TIP+  +++SF+ DD+
Sbjct: 279 WVLDAHAIWHISTIPVHVLFFSFLEDDS 306

Involved in the lipid remodeling steps of GPI-anchor maturation. Lipid remodeling steps consist in the generation of 2 saturated fatty chains at the sn-2 position of GPI-anchors proteins. Required for phospholipase A2 activity that removes an acyl-chain at the sn-2 position of GPI-anchors during the remodeling of GPI.

Homo sapiens (taxid: 9606)

>sp|A2V7M9|PGAP3_CRIGR Post-GPI attachment to proteins factor 3 OS=Cricetulus griseus GN=PGAP3 PE=2 SV=1

 Score =  158 bits (399), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 97/267 (36%), Positives = 139/267 (52%), Gaps = 18/267 (6%)

Query: 3   EPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSV 62
           +P+Y+    W C  DC+Y CM          GH   ++HGKWPF R   IQEPAS   S+
Sbjct: 53  QPIYMSLAGWTCRDDCKYECMWITVGLYLQEGHRVPQFHGKWPFSRFLFIQEPASAVASL 112

Query: 63  LNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHI---YGFLSMNSWFWSAVFHSR 119
           LN      G  S  +L  Y+  +  +       SP++H    + ++S+N+WFWS VFH+R
Sbjct: 113 LN------GLASLVMLCRYRASVPAS-------SPMYHTCMAFAWVSLNAWFWSTVFHTR 159

Query: 120 DVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKL 179
           D DLTEK DY  A A++  S+ L  +R+  ++  +      A LL  +  H  YL+  + 
Sbjct: 160 DTDLTEKMDYFCASAVILHSIYLCCVRTVGLQHPSVARAFGATLLLMLLLHTSYLSLVRF 219

Query: 180 DYGWNMKVCVVMAVAQLLIWATWA--GITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYG 237
           DY +NM   V + +  L  W  W      R P   K   VV       LLE+ DFPP + 
Sbjct: 220 DYSYNMMANVAIGLVNLAWWLAWCLRNHRRLPHTRKCVAVVLLLQGLSLLELLDFPPLFW 279

Query: 238 FLDAHAIWHATTIPLTYIWWSFIRDDA 264
            LDAHAIWH +TIP+  +++ F+ DD+
Sbjct: 280 VLDAHAIWHISTIPVHVLFFRFLEDDS 306

Involved in the lipid remodeling steps of GPI-anchor maturation. Lipid remodeling steps consist in the generation of 2 saturated fatty chains at the sn-2 position of GPI-anchors proteins. Required for phospholipase A2 activity that removes an acyl-chain at the sn-2 position of GPI-anchors during the remodeling of GPI.

Cricetulus griseus (taxid: 10029)

>sp|A7YWP2|PGAP3_BOVIN Post-GPI attachment to proteins factor 3 OS=Bos taurus GN=PGAP3 PE=2 SV=1

 Score =  156 bits (395), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/276 (35%), Positives = 138/276 (50%), Gaps = 11/276 (3%)

Query: 2   QEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFS 61
           ++P+Y+    W C  DC+Y CM          G    ++HGKWPF R    QEPAS   S
Sbjct: 52  RQPIYMSLAGWTCRDDCKYECMWVTVGLYLQEGQKVPQFHGKWPFSRFLCFQEPASAVAS 111

Query: 62  VLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDV 121
            LN      G  S  +L  Y+  +  +   Y    P    + ++S+N+WFWS VFH+RD 
Sbjct: 112 FLN------GLASLVMLCRYRTSVPASSPMY----PTCVAFAWVSLNAWFWSTVFHTRDT 161

Query: 122 DLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDY 181
           DLTEK DY  A  ++  S+ L  +R+  ++  A      A LL  +T H+ YL+    DY
Sbjct: 162 DLTEKMDYFCASTVILHSIYLCCVRTVGLQHPAMASAFRALLLLLLTAHVSYLSLIHFDY 221

Query: 182 GWNMKVCVVMAVAQLLIWATWAG-ITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLD 240
           G+NM   V + +     W  W     R P   K   VV       LLE+ DFPP +  LD
Sbjct: 222 GYNMAANVAIGLLNAAWWLAWCLWNQRLPHVHKCVAVVLLLQGLSLLELLDFPPLFWVLD 281

Query: 241 AHAIWHATTIPLTYIWWSFIRDDAEFQTANMLKKAK 276
           AHAIWH +TIP+  +++SF+ DD+ +       K K
Sbjct: 282 AHAIWHISTIPVHVLFFSFLEDDSLYLLKESEAKVK 317

Involved in the lipid remodeling steps of GPI-anchor maturation. Lipid remodeling steps consist in the generation of 2 saturated fatty chains at the sn-2 position of GPI-anchors proteins. Required for phospholipase A2 activity that removes an acyl-chain at the sn-2 position of GPI-anchors during the remodeling of GPI.

Bos taurus (taxid: 9913)

>sp|Q9P6N9|PER1_SCHPO Protein PER1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC823.07 PE=3 SV=1

 Score =  156 bits (394), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/281 (34%), Positives = 147/281 (52%), Gaps = 19/281 (6%)

Query: 4   PLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSVL 63
           PL L+  +WDC S+C Y C +  E    A      +YHGKW FIRV+GIQE  SV FS+L
Sbjct: 56  PLDLKLFRWDCGSNCGYECEITAENYFAAHNLPSQQYHGKWYFIRVFGIQELFSVFFSML 115

Query: 64  NLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDL 123
           N  +H++G    + ++   +P +   K        W I G   MN+W WS+VFH RD  +
Sbjct: 116 NFMIHYNG----YHIMRRCIPDEHPAK---RLCLSWAIVG---MNAWVWSSVFHIRDTPI 165

Query: 124 TEKFDYSSAVALLGF----SLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKL 179
           TEK DY SA A + F    +LIL +        +    ++    +A    H+ YL+FY  
Sbjct: 166 TEKLDYFSAGAFVLFGSYCTLILMLRLDQLPGGKLLCWIIGVIFIAAFIAHVSYLSFYSF 225

Query: 180 DYGWNMKVCVVMAVAQLLIWATWAGITRHP----SRWKLWVVVFGGALAMLLEIYDFPPY 235
           DYG+NMK  V + + Q ++W  ++   R+     +RW  ++V     LA  LE++DF P 
Sbjct: 226 DYGYNMKANVAVGLVQNILWYYYSWSNRNSGLYWTRWPAYIVT-SLMLATSLELFDFSPI 284

Query: 236 YGFLDAHAIWHATTIPLTYIWWSFIRDDAEFQTANMLKKAK 276
              +DAHA+WH +T+P+T+  + F+     +       K K
Sbjct: 285 ANLIDAHALWHLSTVPITHYLYGFVVRKCSYDLTKGTFKIK 325

Involved in the lipid remodeling steps of GPI-anchor maturation. Lipid remodeling steps consist in the generation of 2 saturated fatty chains at the sn-2 position of GPI-anchors proteins. Required for phospholipase A2 activity that removes an acyl-chain at the sn-2 position of GPI-anchors during the remodeling of GPI. Required for efficient transport of GPI-anchor proteins.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q7K0P4|PGAP3_DROME Post-GPI attachment to proteins factor 3 OS=Drosophila melanogaster GN=CG3271 PE=1 SV=2

 Score =  149 bits (377), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 135/262 (51%), Gaps = 12/262 (4%)

Query: 2   QEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFS 61
           Q+ ++ +  +W C  +C+Y CM          G    +++GKWPF+R+ G+QEPASV FS
Sbjct: 59  QQSVFDRLFQWSCADECQYGCMWRTVFAFFERGWPIPQFYGKWPFLRLLGMQEPASVIFS 118

Query: 62  VLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDV 121
            LN  +H        +L  ++  ++     Y     L HI+   S+N W WSA+FH+RD 
Sbjct: 119 CLNFVVHLR------LLRKFRREVRPDSPCYM----LTHIFAVTSLNGWIWSAIFHTRDF 168

Query: 122 DLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDY 181
            LTE  DY+ A +++  SL + ++R  +      R ++    L++   +  YL+  + +Y
Sbjct: 169 PLTELLDYAFAYSIILCSLYVMVMRMLHRYSLFLRGVITLAFLSYYINYFAYLSVGRFNY 228

Query: 182 GWNMKVCVVMAVAQLLIWATWAGI--TRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFL 239
            +NM V V   V   + W  W     TR P   ++       ALAM LE+ DFPP    L
Sbjct: 229 AFNMMVNVATGVIAAVGWFVWCHFVRTRRPYFRRILRFYILMALAMSLELLDFPPILWIL 288

Query: 240 DAHAIWHATTIPLTYIWWSFIR 261
           DAHA+WH  TIPL  +++  + 
Sbjct: 289 DAHALWHLATIPLASLYYECVE 310

Involved in the lipid remodeling steps of GPI-anchor maturation.

Drosophila melanogaster (taxid: 7227)

>sp|P25625|PER1_YEAST Protein PER1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PER1 PE=1 SV=1

 Score =  104 bits (259), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 132/291 (45%), Gaps = 39/291 (13%)

Query: 4   PLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSVL 63
           PLY +   WDC+SDC Y C       R        ++HGKWPF+RV G QE  S  FS+ 
Sbjct: 65  PLYSKLLFWDCISDCDYQCQHIITRWRIDEEEEIYQFHGKWPFLRVLGTQEFFSTIFSIG 124

Query: 64  NLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFL-----SMNSWFWSAVFHS 118
           N   H+ G++ F         +++      + S    I+ +L      M +W  S+VFH 
Sbjct: 125 NFIPHYKGFVKF------SRIIREEGDRRRKNSRSILIWNYLYVTVAGMLAWTASSVFHC 178

Query: 119 RDVDLTEKFDY--SSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNF 176
           RD+ +TEK DY  +    L GF  I A + S  +  + A+   A+ + A    HIL L +
Sbjct: 179 RDLIITEKLDYFFAGLTVLTGFHAIFARMTSMFLYPKIAQAFTAS-VAAIFALHILRL-Y 236

Query: 177 YKLDYGWNMKVCVVMAVAQLLIWATWAGITRHPSR--------------------WKLWV 216
               Y +NM+  +   V Q ++    +    H  +                    +KL V
Sbjct: 237 VDWSYTYNMRFNIFFGVLQYILLIMLSCQNYHALQKQKLMGEFKKTAYSSFKRQIFKLCV 296

Query: 217 V----VFGGALAMLLEIYDFPPYYGFLDAHAIWHATTIPLTYIWWSFIRDD 263
           +    V    +AM LE++DF  Y   +DAHA+WH  TI  +++ + F  +D
Sbjct: 297 IPILLVIVTTMAMSLELFDFFSYEWQIDAHALWHLCTIWPSWVLYDFFLED 347


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.329    0.140    0.486 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,725,359
Number of Sequences: 539616
Number of extensions: 4210695
Number of successful extensions: 9733
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 9692
Number of HSP's gapped (non-prelim): 17
length of query: 276
length of database: 191,569,459
effective HSP length: 116
effective length of query: 160
effective length of database: 128,974,003
effective search space: 20635840480
effective search space used: 20635840480
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 60 (27.7 bits)

Involved in the lipid remodeling steps of GPI-anchor maturation. Lipid remodeling steps consist in the generation of 2 saturated fatty chains at the sn-2 position of GPI-anchors proteins. Required for phospholipase A2 activity that removes an acyl-chain at the sn-2 position of GPI-anchors during the remodeling of GPI. Required for efficient transport of GPI-anchor proteins.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	276
224094242	342	predicted protein [Populus trichocarpa]	0.996	0.804	0.861	1e-141
225462155	379	PREDICTED: post-GPI attachment to protei	1.0	0.728	0.865	1e-139
225462157	342	PREDICTED: post-GPI attachment to protei	1.0	0.807	0.865	1e-139
147779235	342	hypothetical protein VITISV_034376 [Viti	1.0	0.807	0.862	1e-139
449450862	342	PREDICTED: post-GPI attachment to protei	1.0	0.807	0.829	1e-136
357499877	342	Post-GPI attachment to proteins factor [	1.0	0.807	0.818	1e-135
356520408	343	PREDICTED: post-GPI attachment to protei	0.996	0.801	0.792	1e-130
356506218	343	PREDICTED: post-GPI attachment to protei	0.996	0.801	0.789	1e-130
15219283	342	Per1-like family protein [Arabidopsis th	0.978	0.789	0.785	1e-127
222423801	337	AT1G16560 [Arabidopsis thaliana]	0.978	0.801	0.785	1e-127

>gi|224094242|ref|XP_002310105.1| predicted protein [Populus trichocarpa] gi|222853008|gb|EEE90555.1| predicted protein [Populus trichocarpa]

 Score =  506 bits (1304), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 237/275 (86%), Positives = 259/275 (94%)

Query: 2   QEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFS 61
           QEPLYLQWK+WDC SDCRY CM+DRE +R+ALGHGPVKYHGKWPF RVYGIQEP SVAFS
Sbjct: 68  QEPLYLQWKQWDCQSDCRYYCMLDREKEREALGHGPVKYHGKWPFKRVYGIQEPVSVAFS 127

Query: 62  VLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDV 121
            LNLAMHFHGWLSFFILLYYKLPLKQ KKAYYE++ LWHIYGFLS+NSWFWSAVFHSRDV
Sbjct: 128 ALNLAMHFHGWLSFFILLYYKLPLKQDKKAYYEYASLWHIYGFLSLNSWFWSAVFHSRDV 187

Query: 122 DLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDY 181
           DLTEK DYSSAVA LG+SLI++ILRSFNVRDEAARVMVAAPLLAF+TTHIL++NFYKLDY
Sbjct: 188 DLTEKLDYSSAVAFLGYSLIMSILRSFNVRDEAARVMVAAPLLAFLTTHILFINFYKLDY 247

Query: 182 GWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLDA 241
           GWNM+VCVVMAVAQLL+WA WAG+T HPSRWKLWVVV GG LAMLLEIYDFPPY G++DA
Sbjct: 248 GWNMQVCVVMAVAQLLLWAIWAGVTGHPSRWKLWVVVIGGGLAMLLEIYDFPPYEGYVDA 307

Query: 242 HAIWHATTIPLTYIWWSFIRDDAEFQTANMLKKAK 276
           HA+WHATTIPLTYIWWSFIRDDAEF+T+N+LKK K
Sbjct: 308 HALWHATTIPLTYIWWSFIRDDAEFRTSNLLKKTK 342

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225462155|ref|XP_002266197.1| PREDICTED: post-GPI attachment to proteins factor 3 isoform 1 [Vitis vinifera] gi|296082755|emb|CBI21760.3| unnamed protein product [Vitis vinifera]

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 239/276 (86%), Positives = 254/276 (92%)

Query: 1   MQEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAF 60
           +QEPLYL+WK+WDC SDCRY CM+DRE +R+ALG+GPVKYHGKWPF RVYGIQEPASVA 
Sbjct: 104 LQEPLYLRWKQWDCQSDCRYYCMLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASVAL 163

Query: 61  SVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRD 120
           S LNLAM FHGWLSFFILL YKLPLK  KKAYYE++ LWHIYG LSMNSWFWSAVFHSRD
Sbjct: 164 SALNLAMQFHGWLSFFILLNYKLPLKPNKKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRD 223

Query: 121 VDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLD 180
           VDLTEK DYSSAVALLGFSLILAILRSFNVR EAARVMV+APLLAFVTTHILYLNFYK D
Sbjct: 224 VDLTEKLDYSSAVALLGFSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFD 283

Query: 181 YGWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLD 240
           YGWNMKVCVVM VAQLLIWA WAG+TRHPSRWKLW VV GG LAMLLEIYDFPPY GF+D
Sbjct: 284 YGWNMKVCVVMGVAQLLIWAIWAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVD 343

Query: 241 AHAIWHATTIPLTYIWWSFIRDDAEFQTANMLKKAK 276
           AHA+WHATTIPLTYIWWSFI+DDAEFQTAN+LKK K
Sbjct: 344 AHALWHATTIPLTYIWWSFIKDDAEFQTANLLKKVK 379

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225462157|ref|XP_002266274.1| PREDICTED: post-GPI attachment to proteins factor 3 isoform 2 [Vitis vinifera]

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 239/276 (86%), Positives = 254/276 (92%)

Query: 1   MQEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAF 60
           +QEPLYL+WK+WDC SDCRY CM+DRE +R+ALG+GPVKYHGKWPF RVYGIQEPASVA 
Sbjct: 67  LQEPLYLRWKQWDCQSDCRYYCMLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASVAL 126

Query: 61  SVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRD 120
           S LNLAM FHGWLSFFILL YKLPLK  KKAYYE++ LWHIYG LSMNSWFWSAVFHSRD
Sbjct: 127 SALNLAMQFHGWLSFFILLNYKLPLKPNKKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRD 186

Query: 121 VDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLD 180
           VDLTEK DYSSAVALLGFSLILAILRSFNVR EAARVMV+APLLAFVTTHILYLNFYK D
Sbjct: 187 VDLTEKLDYSSAVALLGFSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFD 246

Query: 181 YGWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLD 240
           YGWNMKVCVVM VAQLLIWA WAG+TRHPSRWKLW VV GG LAMLLEIYDFPPY GF+D
Sbjct: 247 YGWNMKVCVVMGVAQLLIWAIWAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVD 306

Query: 241 AHAIWHATTIPLTYIWWSFIRDDAEFQTANMLKKAK 276
           AHA+WHATTIPLTYIWWSFI+DDAEFQTAN+LKK K
Sbjct: 307 AHALWHATTIPLTYIWWSFIKDDAEFQTANLLKKVK 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147779235|emb|CAN65586.1| hypothetical protein VITISV_034376 [Vitis vinifera]

 Score =  499 bits (1285), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 238/276 (86%), Positives = 253/276 (91%)

Query: 1   MQEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAF 60
           +QEPLYL+WK+WDC SDCRY CM+DRE +R+ALG+GPVKYHGKWPF RVYGIQEPASVA 
Sbjct: 67  LQEPLYLRWKQWDCQSDCRYYCMLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASVAL 126

Query: 61  SVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRD 120
           S LNLAM FHGWLSFFILL YKLPLK  KKAYYE++ LWHIYG LSMNSWFWSAVFHSRD
Sbjct: 127 SALNLAMQFHGWLSFFILLNYKLPLKPNKKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRD 186

Query: 121 VDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLD 180
           VDLTEK DYSSAVALLGFSLILAILRSFNVR EAARVMV+APLLAFVTTHILYLNFYK D
Sbjct: 187 VDLTEKLDYSSAVALLGFSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFD 246

Query: 181 YGWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLD 240
           YGWNMKVCVVM VAQLLIW  WAG+TRHPSRWKLW VV GG LAMLLEIYDFPPY GF+D
Sbjct: 247 YGWNMKVCVVMGVAQLLIWTIWAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVD 306

Query: 241 AHAIWHATTIPLTYIWWSFIRDDAEFQTANMLKKAK 276
           AHA+WHATTIPLTYIWWSFI+DDAEFQTAN+LKK K
Sbjct: 307 AHALWHATTIPLTYIWWSFIKDDAEFQTANLLKKVK 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449450862|ref|XP_004143181.1| PREDICTED: post-GPI attachment to proteins factor 3-like [Cucumis sativus]

 Score =  489 bits (1258), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 229/276 (82%), Positives = 250/276 (90%)

Query: 1   MQEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAF 60
           MQEPLYL+WK+WDC SDCRY+CMV RE +R+ALG+ PVKYHGKWPF R+YGIQEP SVAF
Sbjct: 67  MQEPLYLRWKQWDCQSDCRYHCMVKREGEREALGYDPVKYHGKWPFKRIYGIQEPVSVAF 126

Query: 61  SVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRD 120
           S LNL+MHFHGWLSFFILLYYKLPL+Q KKAYYEF+ LWHIY   SMNSWFWSAVFHSRD
Sbjct: 127 SALNLSMHFHGWLSFFILLYYKLPLRQDKKAYYEFASLWHIYALFSMNSWFWSAVFHSRD 186

Query: 121 VDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLD 180
           VDLTEK DYSSAVA+LGFSLILAILRSFNVR EA RVMVAAPLLAF  THILY+NFY+LD
Sbjct: 187 VDLTEKLDYSSAVAVLGFSLILAILRSFNVRHEATRVMVAAPLLAFALTHILYINFYELD 246

Query: 181 YGWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLD 240
           YGWNM VCV M V+QLLIWA WAG+T HPSRWKLW VV GG LA+LLEIYDFPPY GF+D
Sbjct: 247 YGWNMIVCVTMGVSQLLIWAIWAGVTHHPSRWKLWTVVVGGGLALLLEIYDFPPYKGFVD 306

Query: 241 AHAIWHATTIPLTYIWWSFIRDDAEFQTANMLKKAK 276
           AHA+WHATTIPLTYIWWSFIRDDAEFQT+N+LKK+K
Sbjct: 307 AHALWHATTIPLTYIWWSFIRDDAEFQTSNLLKKSK 342

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357499877|ref|XP_003620227.1| Post-GPI attachment to proteins factor [Medicago truncatula] gi|355495242|gb|AES76445.1| Post-GPI attachment to proteins factor [Medicago truncatula]

 Score =  486 bits (1251), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 226/276 (81%), Positives = 250/276 (90%)

Query: 1   MQEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAF 60
           +QEPLYLQWKKWDCLSDCRY CM+DRE +++ L H PVKYHGKWPF R+YG+QEPASVAF
Sbjct: 67  IQEPLYLQWKKWDCLSDCRYYCMLDREKEKELLNHDPVKYHGKWPFKRIYGMQEPASVAF 126

Query: 61  SVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRD 120
           S LNLAMHFHGW+SFFI+LYYKLPLK  KKAYYE++ LWHIY F S+NSW WSAVFHSRD
Sbjct: 127 SALNLAMHFHGWVSFFIVLYYKLPLKDGKKAYYEYASLWHIYAFFSLNSWLWSAVFHSRD 186

Query: 121 VDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLD 180
           VD+TEK DYSSAV LLG+SLILAILRSFN+RDEA RVMV+APL+AFV TH++YLNFYKLD
Sbjct: 187 VDVTEKLDYSSAVILLGYSLILAILRSFNIRDEATRVMVSAPLIAFVITHVMYLNFYKLD 246

Query: 181 YGWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLD 240
           YGWNM VCVVMAVAQL IWA WAG++RHPSRWKLW+VV  G LAMLLEIYDFPPY GFLD
Sbjct: 247 YGWNMIVCVVMAVAQLTIWAVWAGVSRHPSRWKLWLVVISGGLAMLLEIYDFPPYEGFLD 306

Query: 241 AHAIWHATTIPLTYIWWSFIRDDAEFQTANMLKKAK 276
           AHAIWHATTIPLTY+WWSFIRDDAEF+TA  LKKAK
Sbjct: 307 AHAIWHATTIPLTYVWWSFIRDDAEFRTARFLKKAK 342

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520408|ref|XP_003528854.1| PREDICTED: post-GPI attachment to proteins factor 3-like [Glycine max]

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 218/275 (79%), Positives = 248/275 (90%)

Query: 2   QEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFS 61
           QEPLYLQWKKWDC  DCRY CM+DRE +R++   GPVKYHGKWPF R+YG+QEPASVAFS
Sbjct: 69  QEPLYLQWKKWDCQGDCRYYCMLDREKERESHNLGPVKYHGKWPFRRIYGMQEPASVAFS 128

Query: 62  VLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDV 121
            LNLAMHFHGW+SFFIL++YKLPLK  KKAYYE++ LWH+YG LS+NSWFWSAVFHSRDV
Sbjct: 129 ALNLAMHFHGWVSFFILIHYKLPLKDGKKAYYEYAGLWHMYGLLSLNSWFWSAVFHSRDV 188

Query: 122 DLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDY 181
           DLTEK DYSSAV LLG+SLILAILR+F++RDEA RVMVAAPL+AFVTTH++Y+NFY LDY
Sbjct: 189 DLTEKLDYSSAVVLLGYSLILAILRTFSIRDEATRVMVAAPLIAFVTTHVMYINFYLLDY 248

Query: 182 GWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLDA 241
           GWNM VCVVMAVAQL +WA WAG++ HPSRWKLW+VV  G LAMLLEIYDFPP+ G  DA
Sbjct: 249 GWNMIVCVVMAVAQLSMWAVWAGVSNHPSRWKLWLVVIAGGLAMLLEIYDFPPHQGLFDA 308

Query: 242 HAIWHATTIPLTYIWWSFIRDDAEFQTANMLKKAK 276
           HA+WHATTIPLTYIWWSFIRDDAEF+T+N+LKKAK
Sbjct: 309 HALWHATTIPLTYIWWSFIRDDAEFRTSNLLKKAK 343

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506218|ref|XP_003521884.1| PREDICTED: post-GPI attachment to proteins factor 3-like [Glycine max]

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/275 (78%), Positives = 247/275 (89%)

Query: 2   QEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFS 61
           QEPLYLQWKKWDC SDCRY CM+DRE +R++   GPVKYHGKWPF R+YG+QEPASVAFS
Sbjct: 69  QEPLYLQWKKWDCQSDCRYYCMLDREKERESHNLGPVKYHGKWPFRRIYGMQEPASVAFS 128

Query: 62  VLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDV 121
            LNLAMHFHGW+SFFIL+YYKLPLK  KKAYYE++ LWH+YG LS+NSWFWSAVFHSRDV
Sbjct: 129 ALNLAMHFHGWVSFFILIYYKLPLKDGKKAYYEYAGLWHMYGLLSLNSWFWSAVFHSRDV 188

Query: 122 DLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDY 181
           D+TEK DYSSAV LLG+SLILAILR+F++RDEA RVMVAAPL+AFVTTH++Y+NFY LDY
Sbjct: 189 DITEKLDYSSAVVLLGYSLILAILRTFSIRDEATRVMVAAPLIAFVTTHVMYINFYLLDY 248

Query: 182 GWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLDA 241
           GWNM VCVVMA+AQL +WA WAG++ HPSRWKLW+VV  G LAMLLEIYDFPPY    DA
Sbjct: 249 GWNMIVCVVMAMAQLSMWAVWAGVSNHPSRWKLWLVVISGGLAMLLEIYDFPPYEELFDA 308

Query: 242 HAIWHATTIPLTYIWWSFIRDDAEFQTANMLKKAK 276
           HA+WH TTIPLTYIWWSFIRDDAEF+T+N+LKKAK
Sbjct: 309 HALWHVTTIPLTYIWWSFIRDDAEFRTSNLLKKAK 343

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15219283|ref|NP_173104.1| Per1-like family protein [Arabidopsis thaliana] gi|42571503|ref|NP_973842.1| Per1-like family protein [Arabidopsis thaliana] gi|42571505|ref|NP_973843.1| Per1-like family protein [Arabidopsis thaliana] gi|9989062|gb|AAG10825.1|AC011808_13 Unknown protein [Arabidopsis thaliana] gi|222424439|dbj|BAH20175.1| AT1G16560 [Arabidopsis thaliana] gi|332191347|gb|AEE29468.1| Per1-like family protein [Arabidopsis thaliana] gi|332191348|gb|AEE29469.1| Per1-like family protein [Arabidopsis thaliana] gi|332191349|gb|AEE29470.1| Per1-like family protein [Arabidopsis thaliana]

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 212/270 (78%), Positives = 238/270 (88%)

Query: 1   MQEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAF 60
           +QEPLYLQWKKW C  DCRY CMV+RE +R+ LG  PVKYHGKWPF RV GIQEPASVAF
Sbjct: 63  IQEPLYLQWKKWGCQGDCRYQCMVNRETERETLGQAPVKYHGKWPFKRVLGIQEPASVAF 122

Query: 61  SVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRD 120
           SVLNLAMHFHGWLSFFI++YYKLPLKQ + AYYE+  LWHIYG LSMNSWFWSAVFHSRD
Sbjct: 123 SVLNLAMHFHGWLSFFIMIYYKLPLKQDRTAYYEYVGLWHIYGLLSMNSWFWSAVFHSRD 182

Query: 121 VDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLD 180
           VDLTE+ DYSSAVA+LGFSLILAILR+F++R EAARVMV+AP+LAFVTTHILY+NFYKLD
Sbjct: 183 VDLTERLDYSSAVAILGFSLILAILRTFDIRVEAARVMVSAPILAFVTTHILYINFYKLD 242

Query: 181 YGWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLD 240
           YGWNM VCV M V+QL +WA WA ++ HPS WKLWVVV  G LAMLLEIYDFPPY G+ D
Sbjct: 243 YGWNMIVCVAMGVSQLFLWARWAAVSSHPSNWKLWVVVIAGGLAMLLEIYDFPPYEGYFD 302

Query: 241 AHAIWHATTIPLTYIWWSFIRDDAEFQTAN 270
           AH+IWHA TIPLT +WWSFIRDDAEF+T++
Sbjct: 303 AHSIWHAATIPLTILWWSFIRDDAEFRTSS 332

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222423801|dbj|BAH19866.1| AT1G16560 [Arabidopsis thaliana]

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 212/270 (78%), Positives = 238/270 (88%)

Query: 1   MQEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAF 60
           +QEPLYLQWKKW C  DCRY CMV+RE +R+ LG  PVKYHGKWPF RV GIQEPASVAF
Sbjct: 58  IQEPLYLQWKKWGCQGDCRYQCMVNRETERETLGQAPVKYHGKWPFKRVLGIQEPASVAF 117

Query: 61  SVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRD 120
           SVLNLAMHFHGWLSFFI++YYKLPLKQ + AYYE+  LWHIYG LSMNSWFWSAVFHSRD
Sbjct: 118 SVLNLAMHFHGWLSFFIMIYYKLPLKQDRTAYYEYVGLWHIYGLLSMNSWFWSAVFHSRD 177

Query: 121 VDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLD 180
           VDLTE+ DYSSAVA+LGFSLILAILR+F++R EAARVMV+AP+LAFVTTHILY+NFYKLD
Sbjct: 178 VDLTERLDYSSAVAILGFSLILAILRTFDIRVEAARVMVSAPILAFVTTHILYINFYKLD 237

Query: 181 YGWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLD 240
           YGWNM VCV M V+QL +WA WA ++ HPS WKLWVVV  G LAMLLEIYDFPPY G+ D
Sbjct: 238 YGWNMIVCVAMGVSQLFLWARWAAVSSHPSNWKLWVVVIAGGLAMLLEIYDFPPYEGYFD 297

Query: 241 AHAIWHATTIPLTYIWWSFIRDDAEFQTAN 270
           AH+IWHA TIPLT +WWSFIRDDAEF+T++
Sbjct: 298 AHSIWHAATIPLTILWWSFIRDDAEFRTSS 327

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	276
TAIR|locus:2017968	342	AT1G16560 "AT1G16560" [Arabido	1.0	0.807	0.782	7.8e-126
ZFIN|ZDB-GENE-080204-27	316	zgc:171485 "zgc:171485" [Danio	0.909	0.794	0.377	7.9e-46
UNIPROTKB|Q68EV0	317	pgap3 "Post-GPI attachment to	0.902	0.785	0.386	6.4e-44
UNIPROTKB|Q0VFE3	316	pgap3 "Post-GPI attachment to	0.905	0.791	0.369	4.5e-43
MGI|MGI:2444461	320	Pgap3 "post-GPI attachment to	0.887	0.765	0.373	4.5e-43
UNIPROTKB|F1RWL4	320	PGAP3 "Uncharacterized protein	0.909	0.784	0.373	9.3e-43
UNIPROTKB|Q96FM1	320	PGAP3 "Post-GPI attachment to	0.902	0.778	0.368	5.2e-42
UNIPROTKB|A2V7M9	320	PGAP3 "Post-GPI attachment to	0.894	0.771	0.360	2.8e-41
UNIPROTKB|A7YWP2	319	PGAP3 "Post-GPI attachment to	0.956	0.827	0.357	3.6e-41
POMBASE|SPAC823.07	331	SPAC823.07 "GPI-phospholipase	0.891	0.743	0.366	8.7e-40

TAIR|locus:2017968 AT1G16560 "AT1G16560" [Arabidopsis thaliana (taxid:3702)]

 Score = 1236 (440.2 bits), Expect = 7.8e-126, P = 7.8e-126
 Identities = 216/276 (78%), Positives = 243/276 (88%)

Query:     1 MQEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAF 60
             +QEPLYLQWKKW C  DCRY CMV+RE +R+ LG  PVKYHGKWPF RV GIQEPASVAF
Sbjct:    63 IQEPLYLQWKKWGCQGDCRYQCMVNRETERETLGQAPVKYHGKWPFKRVLGIQEPASVAF 122

Query:    61 SVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRD 120
             SVLNLAMHFHGWLSFFI++YYKLPLKQ + AYYE+  LWHIYG LSMNSWFWSAVFHSRD
Sbjct:   123 SVLNLAMHFHGWLSFFIMIYYKLPLKQDRTAYYEYVGLWHIYGLLSMNSWFWSAVFHSRD 182

Query:   121 VDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLD 180
             VDLTE+ DYSSAVA+LGFSLILAILR+F++R EAARVMV+AP+LAFVTTHILY+NFYKLD
Sbjct:   183 VDLTERLDYSSAVAILGFSLILAILRTFDIRVEAARVMVSAPILAFVTTHILYINFYKLD 242

Query:   181 YGWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFLD 240
             YGWNM VCV M V+QL +WA WA ++ HPS WKLWVVV  G LAMLLEIYDFPPY G+ D
Sbjct:   243 YGWNMIVCVAMGVSQLFLWARWAAVSSHPSNWKLWVVVIAGGLAMLLEIYDFPPYEGYFD 302

Query:   241 AHAIWHATTIPLTYIWWSFIRDDAEFQTANMLKKAK 276
             AH+IWHA TIPLT +WWSFIRDDAEF+T+++LKK K
Sbjct:   303 AHSIWHAATIPLTILWWSFIRDDAEFRTSSLLKKTK 338

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006816 "calcium ion transport" evidence=RCA

GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

ZFIN|ZDB-GENE-080204-27 zgc:171485 "zgc:171485" [Danio rerio (taxid:7955)]

 Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
 Identities = 100/265 (37%), Positives = 145/265 (54%)

Query:     3 EPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSV 62
             +P Y+    W C  DCRY CM        A G+   ++HGKWPF R    +EPAS   S+
Sbjct:    49 QPPYMALTGWTCRDDCRYQCMWTTVGLYQAEGYSIPQFHGKWPFARFLCFEEPASALASL 108

Query:    63 LNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVD 122
             LN      G     +LL Y+  + +    Y+  +     +  +S+N+WFWS VFH+RD  
Sbjct:   109 LN------GLACLLMLLRYRSAVPRQSPMYHTITA----FSLVSLNAWFWSTVFHTRDTY 158

Query:   123 LTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDYG 182
             LTEK DY  A A++ +S+ L  +R+  +R  A   MV   L+   T+H+ YL F   DYG
Sbjct:   159 LTEKMDYFCASAVILYSIYLCCVRTLGLRRPAISSMVGVLLILAFTSHVSYLTFVSFDYG 218

Query:   183 WNMKVCVVMAVAQLLIWATWAGITRH--PSRWKL-WVVVFGGALAMLLEIYDFPPYYGFL 239
             +NM     + +  LL W  W  + R   P  WK   VV+    LA LLE+ DFPP +  L
Sbjct:   219 YNMAANASIGIINLLWWLCWCWLNRRILPYWWKCGMVVLLLHGLA-LLELLDFPPLFWVL 277

Query:   240 DAHAIWHATTIPLTYIWWSFIRDDA 264
             DAHA+WH +T+P+ ++++SF+ DD+
Sbjct:   278 DAHAVWHLSTVPVHFLFYSFLIDDS 302

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=ISS

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=ISS

GO:0006505 "GPI anchor metabolic process" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

UNIPROTKB|Q68EV0 pgap3 "Post-GPI attachment to proteins factor 3" [Xenopus laevis (taxid:8355)]

 Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
 Identities = 104/269 (38%), Positives = 146/269 (54%)

Query:     2 QEPLYLQWKKWDCLSDCRYNCM---VDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASV 58
             Q+PLY++   W CL DCRY CM   V   +K    GH   ++HGKWPF R    QEPAS 
Sbjct:    47 QQPLYMRLTGWTCLDDCRYKCMWYTVSLYLKE---GHEVPQFHGKWPFSRFLFFQEPASA 103

Query:    59 AFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHS 118
               S LN      G  S  +L  Y+  +  + + Y         +  +S+N+WFWS +FH+
Sbjct:   104 LASFLN------GVASLLMLFRYRSSVPSSCQMYRTCLA----FSMVSVNAWFWSTIFHT 153

Query:   119 RDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYK 178
             RD  LTEK DY  A +++  S+ L  +R+F ++  +      A L+     HI YL   +
Sbjct:   154 RDTALTEKMDYFCASSVILHSIYLCCMRTFGLQYPSIANAFGAFLVLLFACHISYLTLGR 213

Query:   179 LDYGWNMKVCVVMAVAQLLIWATWAGITR-H-PSRWK-LWVVVFGGALAMLLEIYDFPPY 235
              DY +NM       +  L+ W  W    R H P  WK + VVV   +LA LLE+ DFPP 
Sbjct:   214 FDYSYNMAANTSFGIVNLMWWLAWCMWRRFHQPYLWKCVLVVVLLQSLA-LLELLDFPPV 272

Query:   236 YGFLDAHAIWHATTIPLTYIWWSFIRDDA 264
                LDAHA+WH +TIPL ++++SF+RDD+
Sbjct:   273 MWILDAHALWHFSTIPLHFLFYSFLRDDS 301

GO:0006505 "GPI anchor metabolic process" evidence=ISS

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=ISS

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=ISS

UNIPROTKB|Q0VFE3 pgap3 "Post-GPI attachment to proteins factor 3" [Xenopus (Silurana) tropicalis (taxid:8364)]

 Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
 Identities = 99/268 (36%), Positives = 143/268 (53%)

Query:     2 QEPLYLQWKKWDCLSDCRYNCM---VDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASV 58
             ++PLY++   W CL DCRY CM   V   +K    GH   ++HGKWPF R    QEPAS 
Sbjct:    47 EQPLYMRVTGWTCLDDCRYQCMWYTVSLYLKE---GHEVPQFHGKWPFSRFLFFQEPASA 103

Query:    59 AFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHS 118
               S LN      G  S  +LL Y+  +  + + Y         +  +S+N+WFWS +FH+
Sbjct:   104 LASFLN------GVASLLMLLRYRSSVPSSCQMYRTCLA----FSMVSVNAWFWSTIFHT 153

Query:   119 RDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYK 178
             RD  LTEK DY  A +++  S+ L  +R+F ++  +      A L+     H+ YL   +
Sbjct:   154 RDTALTEKMDYFCASSVILHSIYLCCMRTFGLQYPSIANGFGAFLVLLFACHVSYLTLGR 213

Query:   179 LDYGWNMKVCVVMAVAQLLIWATWAGITR-H-PSRWKLWVVVFGGALAMLLEIYDFPPYY 236
              DY +NM       V  L+ W  W    R H P  WK  +VV       LLE+ DFPP  
Sbjct:   214 FDYSYNMAANTGFGVLNLMWWLAWCFRRRFHQPYLWKCVLVVISLQSLALLELLDFPPVM 273

Query:   237 GFLDAHAIWHATTIPLTYIWWSFIRDDA 264
               LDAHA+WH +T+PL ++++SF++DD+
Sbjct:   274 WILDAHALWHFSTVPLHFLFYSFLKDDS 301

GO:0006505 "GPI anchor metabolic process" evidence=ISS

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=ISS

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=ISS

MGI|MGI:2444461 Pgap3 "post-GPI attachment to proteins 3" [Mus musculus (taxid:10090)]

 Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
 Identities = 102/273 (37%), Positives = 148/273 (54%)

Query:     2 QEPLYLQWKKWDCLSDCRYNCM---VDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASV 58
             ++P+Y+    W C  DC+Y CM   V   ++    GH   ++HGKWPF R   IQEPAS 
Sbjct:    52 RQPIYMSLAGWTCRDDCKYECMWFTVGLYLQE---GHRVPQFHGKWPFSRFLFIQEPASA 108

Query:    59 AFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHI---YGFLSMNSWFWSAV 115
               S+LN      G  S  +L  Y+  +  +       SP++H    + ++S+N+WFWS V
Sbjct:   109 VASLLN------GLASLVMLCRYRASVPAS-------SPMYHTCMAFAWVSLNAWFWSTV 155

Query:   116 FHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLN 175
             FH+RD DLTEK DY  A A++  S+ L  +R+  ++  +      A LL  +T HI YL+
Sbjct:   156 FHTRDTDLTEKMDYFCASAVILHSVYLCCVRTVGLQHPSVASAFGALLLLLLTGHISYLS 215

Query:   176 FYKLDYGWNMKVCVVMAVAQLLIWATWAGITR----HPSRWKLWVVVFGGALAMLLEIYD 231
                 DYG+NM   V + +  L  W  W    R    H  R  + VV+  G    LLE+ D
Sbjct:   216 LVHFDYGYNMMANVAIGLVNLAWWLVWCLRNRQRLPHTRRCMVVVVLLQGL--SLLELLD 273

Query:   232 FPPYYGFLDAHAIWHATTIPLTYIWWSFIRDDA 264
             FPP +  LDAHAIWH +TIP+  +++ F+ DD+
Sbjct:   274 FPPLFWVLDAHAIWHISTIPVHTLFFRFLEDDS 306

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006505 "GPI anchor metabolic process" evidence=ISO

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=ISO

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=ISO

UNIPROTKB|F1RWL4 PGAP3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
 Identities = 99/265 (37%), Positives = 138/265 (52%)

Query:     3 EPLYLQWKKWDCLSDCRYNCM-VDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFS 61
             +P+Y+    W C  DC+Y CM V   +     GH   ++HGKWPF R    QEPAS   S
Sbjct:    53 QPIYMSLAGWTCRDDCKYECMWVTVGLYLQE-GHKVPQFHGKWPFSRFLCFQEPASAVAS 111

Query:    62 VLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDV 121
              LN      G  S  +L  Y+  +  +   Y    P    + ++S+N+WFWS VFH+RD 
Sbjct:   112 FLN------GLASLVMLCRYRASVPASSPMY----PTCVAFAWVSLNAWFWSTVFHTRDT 161

Query:   122 DLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLDY 181
             DLTEK DY  A  ++  S+ L  +R+  ++  A      A LL  +T H+ YL+    DY
Sbjct:   162 DLTEKLDYFCASTVILHSVYLCCVRTVGLQRPAVASAFRALLLLMLTAHVSYLSLVHFDY 221

Query:   182 GWNMKVCVVMAVAQLLIWATWAGITRH--PSRWKLWVVVFGGALAMLLEIYDFPPYYGFL 239
             G+N+   V M +     W  W    R   P   K  VVV       LLE+ DFPP +  L
Sbjct:   222 GYNLAANVAMGLVNAAWWLAWCLRNRRRLPHVRKCMVVVLLLQALSLLELLDFPPLFWVL 281

Query:   240 DAHAIWHATTIPLTYIWWSFIRDDA 264
             DAHAIWH +TIP+  +++SF+ DD+
Sbjct:   282 DAHAIWHISTIPVHVLFFSFLEDDS 306

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IEA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0006505 "GPI anchor metabolic process" evidence=IEA

UNIPROTKB|Q96FM1 PGAP3 "Post-GPI attachment to proteins factor 3" [Homo sapiens (taxid:9606)]

 Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
 Identities = 99/269 (36%), Positives = 145/269 (53%)

Query:     2 QEPLYLQWKKWDCLSDCRYNCM-VDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAF 60
             ++P+Y+    W C  DC+Y CM V   +     GH   ++HGKWPF R    QEPAS   
Sbjct:    52 RQPIYMSLAGWTCRDDCKYECMWVTVGLYLQE-GHKVPQFHGKWPFSRFLFFQEPASAVA 110

Query:    61 SVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHI---YGFLSMNSWFWSAVFH 117
             S LN      G  S  +L  Y+  +  +       SP++H    + ++S+N+WFWS VFH
Sbjct:   111 SFLN------GLASLVMLCRYRTFVPAS-------SPMYHTCVAFAWVSLNAWFWSTVFH 157

Query:   118 SRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFY 177
             +RD DLTEK DY  A  ++  S+ L  +R+  ++  A      A LL  +T H+ YL+  
Sbjct:   158 TRDTDLTEKMDYFCASTVILHSIYLCCVRTVGLQHPAVVSAFRALLLLMLTVHVSYLSLI 217

Query:   178 KLDYGWNMKVCVVMAVAQLLIWATWA--GITRHPSRWKLWVVVFGGALAMLLEIYDFPPY 235
             + DYG+N+   V + +  ++ W  W      R P   K  VVV       LLE+ DFPP 
Sbjct:   218 RFDYGYNLVANVAIGLVNVVWWLAWCLWNQRRLPHVRKCVVVVLLLQGLSLLELLDFPPL 277

Query:   236 YGFLDAHAIWHATTIPLTYIWWSFIRDDA 264
             +  LDAHAIWH +TIP+  +++SF+ DD+
Sbjct:   278 FWVLDAHAIWHISTIPVHVLFFSFLEDDS 306

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0006505 "GPI anchor metabolic process" evidence=IMP

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=IDA

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IMP

UNIPROTKB|A2V7M9 PGAP3 "Post-GPI attachment to proteins factor 3" [Cricetulus griseus (taxid:10029)]

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 97/269 (36%), Positives = 142/269 (52%)

Query:     3 EPLYLQWKKWDCLSDCRYNCM-VDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFS 61
             +P+Y+    W C  DC+Y CM +   +     GH   ++HGKWPF R   IQEPAS   S
Sbjct:    53 QPIYMSLAGWTCRDDCKYECMWITVGLYLQE-GHRVPQFHGKWPFSRFLFIQEPASAVAS 111

Query:    62 VLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHI---YGFLSMNSWFWSAVFHS 118
             +LN      G  S  +L  Y+  +  +       SP++H    + ++S+N+WFWS VFH+
Sbjct:   112 LLN------GLASLVMLCRYRASVPAS-------SPMYHTCMAFAWVSLNAWFWSTVFHT 158

Query:   119 RDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYK 178
             RD DLTEK DY  A A++  S+ L  +R+  ++  +      A LL  +  H  YL+  +
Sbjct:   159 RDTDLTEKMDYFCASAVILHSIYLCCVRTVGLQHPSVARAFGATLLLMLLLHTSYLSLVR 218

Query:   179 LDYGWNMKVCVVMAVAQLLIWATWAGITRH---PSRWKLWVVVFGGALAMLLEIYDFPPY 235
              DY +NM   V + +  L  W  W  +  H   P   K   VV       LLE+ DFPP 
Sbjct:   219 FDYSYNMMANVAIGLVNLAWWLAWC-LRNHRRLPHTRKCVAVVLLLQGLSLLELLDFPPL 277

Query:   236 YGFLDAHAIWHATTIPLTYIWWSFIRDDA 264
             +  LDAHAIWH +TIP+  +++ F+ DD+
Sbjct:   278 FWVLDAHAIWHISTIPVHVLFFRFLEDDS 306

GO:0006505 "GPI anchor metabolic process" evidence=IMP

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IMP

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=ISS

UNIPROTKB|A7YWP2 PGAP3 "Post-GPI attachment to proteins factor 3" [Bos taurus (taxid:9913)]

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 99/277 (35%), Positives = 140/277 (50%)

Query:     2 QEPLYLQWKKWDCLSDCRYNCM-VDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAF 60
             ++P+Y+    W C  DC+Y CM V   +     G    ++HGKWPF R    QEPAS   
Sbjct:    52 RQPIYMSLAGWTCRDDCKYECMWVTVGLYLQE-GQKVPQFHGKWPFSRFLCFQEPASAVA 110

Query:    61 SVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRD 120
             S LN      G  S  +L  Y+  +  +   Y    P    + ++S+N+WFWS VFH+RD
Sbjct:   111 SFLN------GLASLVMLCRYRTSVPASSPMY----PTCVAFAWVSLNAWFWSTVFHTRD 160

Query:   121 VDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAPLLAFVTTHILYLNFYKLD 180
              DLTEK DY  A  ++  S+ L  +R+  ++  A      A LL  +T H+ YL+    D
Sbjct:   161 TDLTEKMDYFCASTVILHSIYLCCVRTVGLQHPAMASAFRALLLLLLTAHVSYLSLIHFD 220

Query:   181 YGWNMKVCVVMAVAQLLIWATWA-GITRHPSRWKLWVVVFGGALAMLLEIYDFPPYYGFL 239
             YG+NM   V + +     W  W     R P   K   VV       LLE+ DFPP +  L
Sbjct:   221 YGYNMAANVAIGLLNAAWWLAWCLWNQRLPHVHKCVAVVLLLQGLSLLELLDFPPLFWVL 280

Query:   240 DAHAIWHATTIPLTYIWWSFIRDDAEFQTANMLKKAK 276
             DAHAIWH +TIP+  +++SF+ DD+ +       K K
Sbjct:   281 DAHAIWHISTIPVHVLFFSFLEDDSLYLLKESEAKVK 317

GO:0031227 "intrinsic to endoplasmic reticulum membrane" evidence=ISS

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=ISS

GO:0006505 "GPI anchor metabolic process" evidence=ISS

GO:0000139 "Golgi membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

POMBASE|SPAC823.07 SPAC823.07 "GPI-phospholipase A2 activity regulator (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 97/265 (36%), Positives = 144/265 (54%)

Query:     4 PLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSVL 63
             PL L+  +WDC S+C Y C +  E    A      +YHGKW FIRV+GIQE  SV FS+L
Sbjct:    56 PLDLKLFRWDCGSNCGYECEITAENYFAAHNLPSQQYHGKWYFIRVFGIQELFSVFFSML 115

Query:    64 NLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDL 123
             N  +H++G    + ++   +P +   K        W I G   MN+W WS+VFH RD  +
Sbjct:   116 NFMIHYNG----YHIMRRCIPDEHPAK---RLCLSWAIVG---MNAWVWSSVFHIRDTPI 165

Query:   124 TEKFDYSSAVA--LLG-FSLILAILRSFNVRDEAARVMVAAPLL--AFVTTHILYLNFYK 178
             TEK DY SA A  L G +  ++ +LR   +        +   +   AF+  H+ YL+FY 
Sbjct:   166 TEKLDYFSAGAFVLFGSYCTLILMLRLDQLPGGKLLCWIIGVIFIAAFIA-HVSYLSFYS 224

Query:   179 LDYGWNMKVCVVMAVAQLLIWATWAGITRHPSR-WKLW--VVVFGGALAMLLEIYDFPPY 235
              DYG+NMK  V + + Q ++W  ++   R+    W  W   +V    LA  LE++DF P 
Sbjct:   225 FDYGYNMKANVAVGLVQNILWYYYSWSNRNSGLYWTRWPAYIVTSLMLATSLELFDFSPI 284

Query:   236 YGFLDAHAIWHATTIPLTYIWWSFI 260
                +DAHA+WH +T+P+T+  + F+
Sbjct:   285 ANLIDAHALWHLSTVPITHYLYGFV 309

GO:0000329 "fungal-type vacuole membrane" evidence=ISO;IDA

GO:0003674 "molecular_function" evidence=ND

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006506 "GPI anchor biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0030026 "cellular manganese ion homeostasis" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A7YWP2	PGAP3_BOVIN	No assigned EC number	0.3550	0.9601	0.8307	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	276
pfam04080	264	pfam04080, Per1, Per1-like	1e-124
COG5237	319	COG5237, PER1, Predicted membrane protein [Functio	1e-44

>gnl|CDD|217878 pfam04080, Per1, Per1-like

 Score =  353 bits (908), Expect = e-124
 Identities = 125/270 (46%), Positives = 169/270 (62%), Gaps = 11/270 (4%)

Query: 1   MQEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAF 60
            Q PLYL+   WDC SDC Y C      +R+  G   V++HGKWPF RV GIQEP SV F
Sbjct: 1   SQLPLYLRLLLWDCPSDCDYQCQQIITDEREKRGEPIVQFHGKWPFKRVLGIQEPFSVIF 60

Query: 61  SVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRD 120
           S+LNL +H+ G   F  L+ Y LPL+ T+K        + IY  + MN+W WSA+FH+RD
Sbjct: 61  SLLNLLVHYKGLRRFRRLVPYNLPLRPTRKG------NYIIYAIVGMNAWIWSAIFHTRD 114

Query: 121 VDLTEKFDYSSAVALLGFSLILAILRSFNV-RDEAARVMVAAPLLAFVTTHILYLNFYKL 179
             LTEK DY SA A + + L LA++R+F + R    R +  A  LA  TTH+LYL+FY  
Sbjct: 115 FPLTEKLDYFSAGATVLYGLYLAVVRTFRLDRRPLVRRLFTAVCLALYTTHVLYLSFYDW 174

Query: 180 DYGWNMKVCVVMAVAQLLIWATWAGITRHPSR--WKLW--VVVFGGALAMLLEIYDFPPY 235
           DYG+NMK  +V+ + Q ++W  W+ +        WKLW  ++V    LAM LE++DFPP 
Sbjct: 175 DYGYNMKANIVVGLLQNILWILWSFLRYRKYPKLWKLWPILLVIWLILAMSLELFDFPPI 234

Query: 236 YGFLDAHAIWHATTIPLTYIWWSFIRDDAE 265
           +  +DAH++WH  TIP TY+W+ F+ DDAE
Sbjct: 235 FWLIDAHSLWHLATIPPTYLWYDFLIDDAE 264

PER1 is required for GPI-phospholipase A2 activity and is involved in lipid remodelling of GPI-anchored proteins. Length = 264

>gnl|CDD|227562 COG5237, PER1, Predicted membrane protein [Function unknown]

 Score =  152 bits (386), Expect = 1e-44
 Identities = 84/268 (31%), Positives = 123/268 (45%), Gaps = 17/268 (6%)

Query: 4   PLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSVL 63
           PL  +   WDC S C Y C +      ++      + HGKW F RV G+QE  S  FS +
Sbjct: 51  PLVDKLFGWDCDSKCGYMCHLLCLKFTNSGNIKIYQRHGKWGFQRVLGMQEFFSALFSFM 110

Query: 64  NLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDL 123
           N   H+ G   F  +L   L   +  + YY        + ++ M +W  S+VFH RD  +
Sbjct: 111 NFITHYIG---FHRMLRKILRETRLGRLYY------LQWVYIGMLAWISSSVFHIRDNTI 161

Query: 124 TEKFDYSSAVA--LLGFSLILAILRSFNV--RDEAARVMVAAPLLAFVTTHILYLNFYKL 179
           TEK DY  A    L GF + L  +        ++A R  + A  +AF   HI  L+  + 
Sbjct: 162 TEKLDYFLAGLTVLFGFYMALVRMILIVSPPIEKATRGPLQAIFIAFFAYHIHRLSNIEF 221

Query: 180 DYGWNMKVCVVMAVAQLLIW--ATWAGITRHPSRWKLWVV--VFGGALAMLLEIYDFPPY 235
           DY +NM     + V Q ++    ++    +    +K   +  VF   LA  LE++DFPPY
Sbjct: 222 DYVYNMISNCAIGVTQTILSHLVSFLNYRKLGHTFKRIPLFFVFFFFLAGSLELFDFPPY 281

Query: 236 YGFLDAHAIWHATTIPLTYIWWSFIRDD 263
              +DAHA+WH  T   T   + F   D
Sbjct: 282 AYLIDAHALWHLITCISTPFLYLFWSGD 309

Length = 319

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	276
PF04080	267	Per1: Per1-like ; InterPro: IPR007217 A member of	100.0
KOG2970	319	consensus Predicted membrane protein [Function unk	100.0
COG5237	319	PER1 Predicted membrane protein [Function unknown]	100.0
PF05875	262	Ceramidase: Ceramidase; InterPro: IPR008901 This e	97.62
PF03006	222	HlyIII: Haemolysin-III related; InterPro: IPR00425	97.48
PF12036	186	DUF3522: Protein of unknown function (DUF3522); In	96.82
TIGR01065	204	hlyIII channel protein, hemolysin III family. This	96.14
PRK15087	219	hemolysin; Provisional	95.83
KOG0748	286	consensus Predicted membrane proteins, contain hem	83.47

>PF04080 Per1: Per1-like ; InterPro: IPR007217 A member of this family has been implemented in protein processing in the endoplasmic reticulum []

Probab=100.00  E-value=3.1e-110  Score=768.14  Aligned_cols=254  Identities=47%  Similarity=0.858  Sum_probs=234.1

Q ss_pred             CccchhhhccCCCCCCCcccchHhHHHhHHhcCCCCcccccccCccccccccchHHHHHHHhHHHHHHHhHHHHHHHHHh
Q 023882            2 QEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSVLNLAMHFHGWLSFFILLYY   81 (276)
Q Consensus         2 ~~pl~l~l~~W~C~~~C~Y~Cm~~~~~~~~~~g~~v~QFhGKWPF~Rv~GiQEp~SvlFSllNl~~h~~g~~~~~~~~~~   81 (276)
                      ++|+++|+++|||+|||||+|||++|++|+++|+|++||||||||+|++||||||||+||++|+++|++|++++++    
T Consensus         2 ~~Pl~l~l~~W~C~~dC~Y~Cm~~~t~~r~~~g~~i~QfhGKWPF~Rv~GiQEp~Sv~FSllNl~~h~~~~~~~~~----   77 (267)
T PF04080_consen    2 SLPLYLRLLGWDCESDCDYQCMWIITEERIKNGEPIVQFHGKWPFKRVLGIQEPASVLFSLLNLLAHYRGLRKFRR----   77 (267)
T ss_pred             CCCcchHhcCCCCchhCcCcCcHHHHHHHHHcCCCcccccccccchhhhcCchHHHHHHHHHhHHHHHHHHHHHHH----
Confidence            6899999999999999999999999999999999999999999999999999999999999999999999988543    


Q ss_pred             hCCCCCCccccccchhhHHHHHHHHHHHHHhHhhhhccCCCccchhhHHHhHHHHHHHHHHHHHHhcccc-chHHHHHHH
Q 023882           82 KLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVR-DEAARVMVA  160 (276)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~aW~wStiFH~RD~~~TEklDYf~A~~~vl~~l~~~~~R~~~l~-~~~~r~~~~  160 (276)
                      +.+.+.+.++      .|+++++||||||+||||||+||+++|||||||||+++|++|+|++++|+++++ ++..+.+++
T Consensus        78 ~~~~~~p~~~------~~~~~~~v~~naW~wStvFH~RD~~~TE~lDYf~A~a~vl~~l~~~~~R~f~l~~~~~~~~~~~  151 (267)
T PF04080_consen   78 QVPRNSPMYP------YYIIYAIVSMNAWIWSTVFHTRDTPLTEKLDYFSAGATVLFGLYAAIVRIFRLYRRRRLRRIFT  151 (267)
T ss_pred             hccCCCCCcC------eeehHHHHHHHHHHHHHHHHHhcccHhhHhHHhhhHHHHHHHHHHHHHHHhcccccchHHHHHH
Confidence            3443333322      267899999999999999999999999999999999999999999999999994 455678899


Q ss_pred             HHHHHHHHHHhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhhcCCcc---------chHH--HHHHHHHHHHHhhh
Q 023882          161 APLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAGITRHPSR---------WKLW--VVVFGGALAMLLEI  229 (276)
Q Consensus       161 ~~~~~~~~~Hv~yL~~~~fdY~YNM~~nv~~G~~~~~lw~~~~~~~~~~~~---------~~~~--~~vv~~~~a~~LEl  229 (276)
                      ++|+++|++||.||++.||||||||++||++|++|+++|+.|++.++++.+         ++++  ++++++.+||+|||
T Consensus       152 ~~~~~~~~~Hv~yL~~~~fdY~YNM~~nv~~G~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~~~lam~LEl  231 (267)
T PF04080_consen  152 ALCIAFYIAHVSYLSFVRFDYGYNMKANVAVGLLQNILWLLWSFRNYRRYPSVKKSYSKRWKLWPILFVVLTILAMSLEL  231 (267)
T ss_pred             HHHHHHHHHHHHHccccccccHhHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999998765433         6777  77889999999999


Q ss_pred             hcCCCcccchhhhHHhhhccchhHHHHHHHHHHHHh
Q 023882          230 YDFPPYYGFLDAHAIWHATTIPLTYIWWSFIRDDAE  265 (276)
Q Consensus       230 ~DFpP~~~~lDAHALWHl~Tip~~~~wy~fl~~D~~  265 (276)
                      +||||+++++|||||||++||||+++||+|+++|+|
T Consensus       232 ~DFpP~~~~lDAHALWHl~Tip~~~~wy~Fl~~D~~  267 (267)
T PF04080_consen  232 FDFPPIFWLLDAHALWHLATIPPTYLWYDFLIDDAE  267 (267)
T ss_pred             hccCcccccchHHHHHHHHHhhHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999986

>KOG2970 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=1.3e-102  Score=717.58  Aligned_cols=264  Identities=49%  Similarity=0.945  Sum_probs=246.9

Q ss_pred             CccchhhhccCCCCCCCcccchHhHHHhHHhcCCCCcccccccCccccccccchHHHHHHHhHHHHHHHhHHHHHHHHHh
Q 023882            2 QEPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSVLNLAMHFHGWLSFFILLYY   81 (276)
Q Consensus         2 ~~pl~l~l~~W~C~~~C~Y~Cm~~~~~~~~~~g~~v~QFhGKWPF~Rv~GiQEp~SvlFSllNl~~h~~g~~~~~~~~~~   81 (276)
                      ..|++.|+..|||.+||+|+||+.++++|.++|+|++||||||||+||+||||||||+||++|+++|++|+.+      +
T Consensus        52 ~~~l~~r~~~wdc~s~C~Y~Cm~~t~~~~~~~~~pi~qfhGKWpFlrvlGiQEp~SviFS~lNl~~h~~g~~~------~  125 (319)
T KOG2970|consen   52 FHPLYTRLWAWDCCSDCRYQCMWTTESEFIKRGGPIPQFHGKWPFLRVLGIQEPFSVIFSFLNLITHYKGLVK------F  125 (319)
T ss_pred             cchhHHHHHhcCcchhcCceeeeeehhhHHhcCCccccccCCcchhhhhhccchHHHHHHHHHHHHHHHHHhh------e
Confidence            3499999999999999999999999999999999999999999999999999999999999999999999644      5


Q ss_pred             hCCCCCCccccccchhhHHHHHHHHHHHHHhHhhhhccCCCccchhhHHHhHHHHHHHHHHHHHHhccccch-HHHHHHH
Q 023882           82 KLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDE-AARVMVA  160 (276)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~aW~wStiFH~RD~~~TEklDYf~A~~~vl~~l~~~~~R~~~l~~~-~~r~~~~  160 (276)
                      |.+.+++++.+|+  ++|++|+++|||||+||+|||+||+++|||||||+|+++|+||+|++++|+++++.. ..|.+++
T Consensus       126 r~~~~~~~~~r~~--~l~~I~a~i~mnawiwSsvFH~rD~~lTEklDYf~A~~~vlf~ly~a~ir~~~i~~~~~~~~~it  203 (319)
T KOG2970|consen  126 RRPKKPNRPTRYE--RLWLIYAYIGMNAWIWSSVFHIRDVPLTEKLDYFSAYLTVLFGLYVALIRMLSIQSLPALRGMIT  203 (319)
T ss_pred             ecccCCCCcchhc--cchhhHHHHHHHHHHHHHhhhhcCCchHhhhhHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHH
Confidence            6677777777777  689999999999999999999999999999999999999999999999999999876 6789999


Q ss_pred             HHHHHHHHHHhhhcccccccccchhhhHHHHHHHHHHHHHHHHhh-hcCCccchHHHH--HHHHHHHHHhhhhcCCCccc
Q 023882          161 APLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAGI-TRHPSRWKLWVV--VFGGALAMLLEIYDFPPYYG  237 (276)
Q Consensus       161 ~~~~~~~~~Hv~yL~~~~fdY~YNM~~nv~~G~~~~~lw~~~~~~-~~~~~~~~~~~~--vv~~~~a~~LEl~DFpP~~~  237 (276)
                      ++++++|+.|+.|||+++|||||||++|+++|++|+++|..|+++ +++|+.++++++  +.++.+||+||++||||+.|
T Consensus       204 a~fla~ya~Hi~yls~~~fdYgyNm~~~v~~g~iq~vlw~~~~~~~~~~~s~~~i~~~~i~~~~~LA~sLEi~DFpPy~~  283 (319)
T KOG2970|consen  204 AIFLAFYANHILYLSFYNFDYGYNMIVCVAIGVIQLVLWLVWSFKKRNLPSFWRIWPILIVIFFFLAMSLEIFDFPPYAW  283 (319)
T ss_pred             HHHHHHHHHHHHHHhheecccccceeeehhhHHHHHHHHHHHHHHhhcCcchhhhhHHHHHHHHHHHHHHHhhcCCchhh
Confidence            999999999999999999999999999999999999999999954 578888887654  44569999999999999999


Q ss_pred             chhhhHHhhhccchhHHHHHHHHHHHHhHHHHhhhh
Q 023882          238 FLDAHAIWHATTIPLTYIWWSFIRDDAEFQTANMLK  273 (276)
Q Consensus       238 ~lDAHALWHl~Tip~~~~wy~fl~~D~~~~~~~~~~  273 (276)
                      ++|||||||++|||++++||+|+.+|+++.+++++|
T Consensus       284 ~iDAHALWHlaTIplt~~~~~Fv~~d~~~~t~~~l~  319 (319)
T KOG2970|consen  284 LIDAHALWHLATIPLTILWYDFVSDDYDFATGVRLK  319 (319)
T ss_pred             hcchHHHHHhhcCccHHHHHHHhhchhhhhcceecC
Confidence            999999999999999999999999999999987765

>COG5237 PER1 Predicted membrane protein [Function unknown]

Probab=100.00  E-value=2.3e-85  Score=592.20  Aligned_cols=257  Identities=32%  Similarity=0.474  Sum_probs=228.7

Q ss_pred             ccchhhhccCCCCCCCcccchHhHHHhHHhcCCCCcccccccCccccccccchHHHHHHHhHHHHHHHhHHHHHHHHHhh
Q 023882            3 EPLYLQWKKWDCLSDCRYNCMVDREIKRDALGHGPVKYHGKWPFIRVYGIQEPASVAFSVLNLAMHFHGWLSFFILLYYK   82 (276)
Q Consensus         3 ~pl~l~l~~W~C~~~C~Y~Cm~~~~~~~~~~g~~v~QFhGKWPF~Rv~GiQEp~SvlFSllNl~~h~~g~~~~~~~~~~~   82 (276)
                      .|++.++++|||.|+|+|+|+...++-+.++++|+.||||||||.||+||||++|++||++|+++||+|+.++    +++
T Consensus        50 ~pL~~klf~wDc~s~cgy~C~~~~~~~~~~~n~~~~q~hGkW~F~rVlG~qEfFS~~FS~~Nfi~hy~gfh~m----~r~  125 (319)
T COG5237          50 FPLVDKLFGWDCDSKCGYMCHLLCLKFTNSGNIKIYQRHGKWGFQRVLGMQEFFSALFSFMNFITHYIGFHRM----LRK  125 (319)
T ss_pred             ccHHHHHHcCccccccchHHHHHHHHHhccCCchhhhhcCccceeeehhHHHHHHHHHHHHHHHHHHHHHHHH----HHH
Confidence            4899999999999999999999999999999999999999999999999999999999999999999999773    234


Q ss_pred             CCCC-CCccccccchhhHHHHHHHHHHHHHhHhhhhccCCCccchhhHHHhHHHHHHHHHHHHHHhccccc----hHHHH
Q 023882           83 LPLK-QTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLILAILRSFNVRD----EAARV  157 (276)
Q Consensus        83 ~~~~-~~~~~~~~~~~~~~~~~~v~~~aW~wStiFH~RD~~~TEklDYf~A~~~vl~~l~~~~~R~~~l~~----~~~r~  157 (276)
                      .++. +.++.++      ++++++||+||+||+|||+||+++|||+|||+|+++|++|+|++.+|+.++..    +..|.
T Consensus       126 i~~e~~~~R~~~------l~wv~igmlAwi~SsvFHird~~iTeklDYF~AgltVLfGfy~~lvrm~~~~~~p~~K~~~~  199 (319)
T COG5237         126 ILRETRLGRLYY------LQWVYIGMLAWISSSVFHIRDNTITEKLDYFLAGLTVLFGFYMALVRMILIVSPPIEKATRG  199 (319)
T ss_pred             hcccccccceEE------eeHHHHHHHHHHHHhheeeeccchhhhHHHHHhhHHHHHHHHHHHHHHHHhhcCchHHHHHh
Confidence            4433 3344343      34579999999999999999999999999999999999999999999998753    44577


Q ss_pred             HHHHHHHHHHHHHhhhcccccccccchhhhHHHHHHHHHHHHHHHHhhhcCC--ccchHH--HHHHHHHHHHHhhhhcCC
Q 023882          158 MVAAPLLAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAGITRHP--SRWKLW--VVVFGGALAMLLEIYDFP  233 (276)
Q Consensus       158 ~~~~~~~~~~~~Hv~yL~~~~fdY~YNM~~nv~~G~~~~~lw~~~~~~~~~~--~~~~~~--~~vv~~~~a~~LEl~DFp  233 (276)
                      ..+++++++|++||.||++++|||+|||++|+++|+.|++||.+.+..+++.  ..+|-+  .+|..+.+|+|+||+|||
T Consensus       200 ~~~aifia~fa~Hi~rls~i~fdY~YNm~~n~aigv~q~iL~~~~s~~ny~~~g~~~kr~p~~~v~~~~lA~slElfDf~  279 (319)
T COG5237         200 PLQAIFIAFFAYHIHRLSNIEFDYVYNMISNCAIGVTQTILSHLVSFLNYRKLGHTFKRIPLFFVFFFFLAGSLELFDFP  279 (319)
T ss_pred             HHHHHHHHHHHHHHHHHhhccceeeehhhhcchHHHHHHHHHHHHHHhhhHhhhhhhhhhhHHHHHHHHHhhhhhhhccC
Confidence            7789999999999999999999999999999999999999999999887654  223332  456778899999999999


Q ss_pred             CcccchhhhHHhhhccchhHHHHHHHHHHHHhHHHH
Q 023882          234 PYYGFLDAHAIWHATTIPLTYIWWSFIRDDAEFQTA  269 (276)
Q Consensus       234 P~~~~lDAHALWHl~Tip~~~~wy~fl~~D~~~~~~  269 (276)
                      |+-+++||||||||.|+|++.+.|+|..+|+.|.-+
T Consensus       280 pya~lIDaHAlWHL~t~~~t~~ly~F~~~d~~y~~n  315 (319)
T COG5237         280 PYAYLIDAHALWHLITCISTPFLYLFWSGDVYYHGN  315 (319)
T ss_pred             cHHHHhhHHHHhHhhhccchHHHHHhhhcceeeecc
Confidence            999999999999999999999999999999887554

>PF05875 Ceramidase: Ceramidase; InterPro: IPR008901 This entry consists of several ceramidases

Probab=97.62  E-value=0.0059  Score=56.05  Aligned_cols=186  Identities=16%  Similarity=0.070  Sum_probs=95.4

Q ss_pred             ccchHHHHHHHhHHHHHHHhHHHHHHHHHhhCCCCCCccccccchhhHHHHHHHHHHHHHhHhhhhccCCCccchhhHHH
Q 023882           52 IQEPASVAFSVLNLAMHFHGWLSFFILLYYKLPLKQTKKAYYEFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSS  131 (276)
Q Consensus        52 iQEp~SvlFSllNl~~h~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~aW~wStiFH~RD~~~TEklDYf~  131 (276)
                      +=||.=++-++.=+++-..|+++.    ++   .+.+. ..      ...+..+..++ +-|+.||+-=...|+-+|=..
T Consensus        24 iAEf~NtlSNl~fi~~al~gl~~~----~~---~~~~~-~~------~l~~~~l~~VG-iGS~~FHaTl~~~~ql~DelP   88 (262)
T PF05875_consen   24 IAEFWNTLSNLAFIVAALYGLYLA----RR---RGLER-RF------ALLYLGLALVG-IGSFLFHATLSYWTQLLDELP   88 (262)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHH----hh---ccccc-hh------HHHHHHHHHHH-HhHHHHHhChhhhHHHhhhhh
Confidence            569998887777777777666542    11   11111 11      12233334444 899999998889999999766


Q ss_pred             hHHHHHHHHHHHHHHhccccchHHHHHHHHHH----HHHHHHHhhhcccccccccchhhhHHHHHHHHHHHHHHHHh--h
Q 023882          132 AVALLGFSLILAILRSFNVRDEAARVMVAAPL----LAFVTTHILYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAG--I  205 (276)
Q Consensus       132 A~~~vl~~l~~~~~R~~~l~~~~~r~~~~~~~----~~~~~~Hv~yL~~~~fdY~YNM~~nv~~G~~~~~lw~~~~~--~  205 (276)
                      -.-..+..++....+..  .++..|......+    ++.-+.|...=   +. .    .-++.+|.....+.+.-..  .
T Consensus        89 Ml~~~~~~~~~~~~~~~--~~~~~~~~~~~~L~~~~~~~t~~~~~~~---~p-~----~~~~~f~~~~~~~~~~~~~~~~  158 (262)
T PF05875_consen   89 MLWATLLFLYIVLTRRY--SSPRYRLALPLLLFIYAVVVTVLYFVLD---NP-V----FHQIAFASLVLLVILRSIYLIR  158 (262)
T ss_pred             HHHHHHHHHHHHhcccc--cCchhhHHHHHHHHHHHHHHHHHHhhhc---cc-h----hhhhhHHHHHHHHHHHHHHHHH
Confidence            54333333343333333  1111122222111    11222333211   11 1    1122233322222221111  1


Q ss_pred             h------cCCccchHH-HHHHHHHHHHHhhhhcC--------------CCcccchhhhHHhhhccchhHHHHHHHHHH
Q 023882          206 T------RHPSRWKLW-VVVFGGALAMLLEIYDF--------------PPYYGFLDAHAIWHATTIPLTYIWWSFIRD  262 (276)
Q Consensus       206 ~------~~~~~~~~~-~~vv~~~~a~~LEl~DF--------------pP~~~~lDAHALWHl~Tip~~~~wy~fl~~  262 (276)
                      .      +++...++. .-++...+|..+-..|-              .|+..++--|++||+.|---+++...+.+-
T Consensus       159 ~~~~~~~~~~~~~~l~~~~~~~f~~a~~~W~iD~~~C~~~~~~~~~~g~p~~~~le~H~~WHilt~ig~Y~~~~~~~~  236 (262)
T PF05875_consen  159 RRVRDACRRRRARRLLLFGLALFLVAFFFWNIDRIFCSSLRAIRFPYGLPLGFLLELHAWWHILTGIGAYLLIVFVAY  236 (262)
T ss_pred             HhcCchhhchHHHHHHHHHHHHHHHHHHHHHhHHHHHccccccccccCCcchhHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            1      112222332 33455567888888886              356667789999999998888887777554

Ceramidases are enzymes involved in regulating cellular levels of ceramides, sphingoid bases, and their phosphates.; GO: 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides, 0006672 ceramide metabolic process, 0016021 integral to membrane

>PF03006 HlyIII: Haemolysin-III related; InterPro: IPR004254 Members of this family are integral membrane proteins

Probab=97.48  E-value=0.0033  Score=55.17  Aligned_cols=154  Identities=17%  Similarity=0.200  Sum_probs=76.3

Q ss_pred             HHHHHHHHHHHHHhHhhhhc-------cCCCccchhhHHHhHHHHHHHHHHHHHHhccccchHHHHHHHHH-HHHHHHHH
Q 023882           99 WHIYGFLSMNSWFWSAVFHS-------RDVDLTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAP-LLAFVTTH  170 (276)
Q Consensus        99 ~~~~~~v~~~aW~wStiFH~-------RD~~~TEklDYf~A~~~vl~~l~~~~~R~~~l~~~~~r~~~~~~-~~~~~~~H  170 (276)
                      ..+|.+..+...+.||++|+       +.-..-.|+||.+-...+..+..-...-.+.-++.......... ++++....
T Consensus        44 ~~~~~~~~~~~~~~St~yH~f~~~s~~~~~~~~~~lD~~gI~l~i~gs~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  123 (222)
T PF03006_consen   44 FLIYLLSAILCFLCSTLYHLFSCHSEGKVYHIFLRLDYAGIFLLIAGSYTPFIYYGFYCHPWLGWFYLAFIWILALIGIV  123 (222)
T ss_pred             HHHHHHHHHHHHHhHHHhhCCCcCCcHHHHHHHHhcchhhhhHhHhhhhhhHHHhhccccchHHHHHHHHHHHHHHHhHH
Confidence            34566767777899999999       34566779999997766665544333333311222222111111 11111111


Q ss_pred             hhhccccccc----ccchhhhHHHHHHHHHHHHHHHHhhhc---CCc-cchHHHHHHHHHHHHHhhhhcCCCcc--cc--
Q 023882          171 ILYLNFYKLD----YGWNMKVCVVMAVAQLLIWATWAGITR---HPS-RWKLWVVVFGGALAMLLEIYDFPPYY--GF--  238 (276)
Q Consensus       171 v~yL~~~~fd----Y~YNM~~nv~~G~~~~~lw~~~~~~~~---~~~-~~~~~~~vv~~~~a~~LEl~DFpP~~--~~--  238 (276)
                       ..+ ...++    ..--+.+-++.|....+...-......   .+. ......-.++-.+|+.+-..++|.-+  +-  
T Consensus       124 -~~~-~~~~~~~~~~~~r~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~G~~fy~~~~PEr~~pg~fD  201 (222)
T PF03006_consen  124 -LSL-FPCFSSPRFRWLRTIFFLLLGWSGIIPIFHRIFFLGGWGSPDPLWLLILGGVLYLLGAVFYATRIPERWFPGKFD  201 (222)
T ss_pred             -hhc-chhhcCCccceeeehHhHHHHHHHHhhhHHHHHHhccccchHHHHHHHHHHHHHHHhHHHhhhccccccCCCCcC
Confidence             111 11211    222333444555544444332121111   111 11112223445678889999977633  22  


Q ss_pred             --hhhhHHhhhccchhHH
Q 023882          239 --LDAHAIWHATTIPLTY  254 (276)
Q Consensus       239 --lDAHALWHl~Tip~~~  254 (276)
                        .-+|.+||+.++--+.
T Consensus       202 ~~g~sHqi~Hi~v~~~~~  219 (222)
T PF03006_consen  202 IWGHSHQIWHIFVVLAAL  219 (222)
T ss_pred             CCCccHHHHHHHHHHHHH
Confidence              4499999998765443

This family includes proteins that are hemolysin-III homologs.; GO: 0016021 integral to membrane

>PF12036 DUF3522: Protein of unknown function (DUF3522); InterPro: IPR021910 This family of proteins is functionally uncharacterised

Probab=96.82  E-value=0.036  Score=49.03  Aligned_cols=93  Identities=13%  Similarity=0.180  Sum_probs=52.0

Q ss_pred             HHHHHHHHHhHhhhhccC-CC----cc----chhhHHHhHHHHHHHHHHHHHHhccccchHHH--HHHHHHHHHHHHHHh
Q 023882          103 GFLSMNSWFWSAVFHSRD-VD----LT----EKFDYSSAVALLGFSLILAILRSFNVRDEAAR--VMVAAPLLAFVTTHI  171 (276)
Q Consensus       103 ~~v~~~aW~wStiFH~RD-~~----~T----EklDYf~A~~~vl~~l~~~~~R~~~l~~~~~r--~~~~~~~~~~~~~Hv  171 (276)
                      +.++..+=++|+.+|+.| .+    ++    ++|||......++ +..+.++..-++++...+  ..+++.++++..   
T Consensus        34 a~v~~~tm~~S~~YHacd~~~~~~~lc~~~~~~L~~~~~~~s~~-~~~vtl~~~a~~~~~~~~~l~~~~~~~~ai~~---  109 (186)
T PF12036_consen   34 AFVYTFTMFFSTFYHACDSGPGEIFLCIMDWHRLQNIDFIGSFL-SIWVTLCAMARLDEPLKSVLHYFGALVIAIFQ---  109 (186)
T ss_pred             HHHHHHHHHHHHhcccccCCCCceEEeechHHHHHHHHHHHHHH-HHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH---
Confidence            678888999999999999 55    44    4788877664433 233333444444443322  223333332221   


Q ss_pred             hhcccccccccchhhhHHHHHHH-HHHHHHHHH
Q 023882          172 LYLNFYKLDYGWNMKVCVVMAVA-QLLIWATWA  203 (276)
Q Consensus       172 ~yL~~~~fdY~YNM~~nv~~G~~-~~~lw~~~~  203 (276)
                       .  ..+||+. |+..-+++|++ =.+-|+..+
T Consensus       110 -~--~~~~~~~-~~~~Pi~~~~~i~~~~w~~r~  138 (186)
T PF12036_consen  110 -Q--KDRWSLW-NTIGPILIGLLILLVSWLYRC  138 (186)
T ss_pred             -h--hCcccch-hhHHHHHHHHHHHHHHHheec
Confidence             2  3478854 66666666653 344455444

This protein is found in eukaryotes. Proteins in this family are typically between 220 to 787 amino acids in length.

>TIGR01065 hlyIII channel protein, hemolysin III family

Probab=96.14  E-value=0.28  Score=43.63  Aligned_cols=150  Identities=15%  Similarity=0.180  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHHHhHhhhhccCCC-----ccchhhHHHhHHHHHHHHHHHHHHhccccchHHHHHHHHH-HHHHH-HHHh
Q 023882           99 WHIYGFLSMNSWFWSAVFHSRDVD-----LTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAP-LLAFV-TTHI  171 (276)
Q Consensus        99 ~~~~~~v~~~aW~wStiFH~RD~~-----~TEklDYf~A~~~vl~~l~~~~~R~~~l~~~~~r~~~~~~-~~~~~-~~Hv  171 (276)
                      ..+|..-.+..-..||+||+-+..     +-+|+||.+-..+|.-+..-...-.+.  .+....+..+. .+++. +.+-
T Consensus        39 ~~vy~~~~~~~~~~St~yH~~~~s~~~~~~~~rlD~~gI~~lIaGsytP~~~~~~~--~~~~~~~~~~iw~la~~gi~~~  116 (204)
T TIGR01065        39 FSIYGISLILLFLVSTLYHSIPKGSKAKNWLRKIDHSMIYVLIAGTYTPFLLLALP--GPLGWTVLWIIWGLAIGGIIYK  116 (204)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCcCchhHHHHHHHccHHHHHHHHHHhhHHHHHHHcC--CcHHHHHHHHHHHHHHHHHHHH
Confidence            456777788889999999988731     456889998776666554433333332  22222122211 11111 1111


Q ss_pred             hhcccccccccchhhhHHHHHHHHHHHHHHHHhhhcCCccchHHHHH---HHHHHHHHhhhhcCCCcccchhhhHHhhhc
Q 023882          172 LYLNFYKLDYGWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVV---FGGALAMLLEIYDFPPYYGFLDAHAIWHAT  248 (276)
Q Consensus       172 ~yL~~~~fdY~YNM~~nv~~G~~~~~lw~~~~~~~~~~~~~~~~~~v---v~~~~a~~LEl~DFpP~~~~lDAHALWHl~  248 (276)
                       .+...+++. .-...=++.|.+..+..-..  .+..+. .-...++   +.-+.++.+=..|+|--+   |-|.+||+.
T Consensus       117 -~~~~~~~r~-~r~~~y~~~G~~~v~~~~~~--~~~~~~-~~~~~l~~gg~~Y~~G~~fY~~~~p~~~---~~H~iwH~f  188 (204)
T TIGR01065       117 -LFFHKRPRW-LSLFLYLIMGWLVVLVIKPL--YHNLPG-AGFSLLAAGGLLYTVGAIFYALKWPIPF---TYHAIWHLF  188 (204)
T ss_pred             -HHccCCCch-hHHHHHHHHHHHHHHHHHHH--HHhCCH-HHHHHHHHHhHHHHcchHheeecCCCCC---CcChHHHHH
Confidence             111223331 23333344443333321111  111121 1112111   223456667777877433   229999998


Q ss_pred             cchhHHHHHH
Q 023882          249 TIPLTYIWWS  258 (276)
Q Consensus       249 Tip~~~~wy~  258 (276)
                      .+-=+...|-
T Consensus       189 V~~g~~~h~~  198 (204)
T TIGR01065       189 VLGASACHFV  198 (204)
T ss_pred             HHHHHHHHHH
Confidence            8766655543

This family includes proteins from pathogenic and non-pathogenic bacteria, Homo sapiens and Drosophila. In Bacillus cereus, a pathogen, it has been show to function as a channel-forming cytolysin. The human protein is expressed preferentially in mature macrophages, consistent with a role cytolytic role.

>PRK15087 hemolysin; Provisional

Probab=95.83  E-value=0.43  Score=43.20  Aligned_cols=149  Identities=16%  Similarity=0.210  Sum_probs=73.5

Q ss_pred             HHHHHHHHHHHHHhHhhhhccCCC----ccchhhHHHhHHHHHHHHHHHHHHhccccchHHHHHHHHH-HHHHHHHHhhh
Q 023882           99 WHIYGFLSMNSWFWSAVFHSRDVD----LTEKFDYSSAVALLGFSLILAILRSFNVRDEAARVMVAAP-LLAFVTTHILY  173 (276)
Q Consensus        99 ~~~~~~v~~~aW~wStiFH~RD~~----~TEklDYf~A~~~vl~~l~~~~~R~~~l~~~~~r~~~~~~-~~~~~~~Hv~y  173 (276)
                      ..+|+.-.+..-..||+||+=..+    +=+|+||.+-..+|.-+..=...-.+  +....+.++.+. .+++.. =+..
T Consensus        54 ~~vy~~s~~~l~~~StlYH~~~~~~~~~~~~rlDh~~I~llIaGsytP~~~~~~--~~~~~~~l~~~iW~~a~~G-i~~~  130 (219)
T PRK15087         54 YSLYGGSMILLFLASTLYHAIPHQRAKRWLKKFDHCAIYLLIAGTYTPFLLVGL--DSPLARGLMIVIWSLALLG-ILFK  130 (219)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHccHHHHHHHHHHhhHHHHHHHc--cCHHHHHHHHHHHHHHHHH-HHHH
Confidence            356777778889999999986521    23469999866655544332222222  222222222111 111111 1112


Q ss_pred             c-ccccccccchhhhHHHHHHHHHHHHHHHHhhhcCCccchHHHHHH---HHHHHHHhhhhcCCCcccchhhhHHhhhcc
Q 023882          174 L-NFYKLDYGWNMKVCVVMAVAQLLIWATWAGITRHPSRWKLWVVVF---GGALAMLLEIYDFPPYYGFLDAHAIWHATT  249 (276)
Q Consensus       174 L-~~~~fdY~YNM~~nv~~G~~~~~lw~~~~~~~~~~~~~~~~~~vv---~~~~a~~LEl~DFpP~~~~lDAHALWHl~T  249 (276)
                      + ...+|+ ...+..=++.|.+..+.-.-+  ....+. .-+..++.   .-+.++.+=..|-+|+     +|++||+..
T Consensus       131 ~~~~~~~r-~l~~~~Yl~mGw~~v~~~~~l--~~~~~~-~~l~~l~~GG~~Y~~G~~fY~~~~~p~-----~H~IwH~fV  201 (219)
T PRK15087        131 LAFAHRFK-VLSLVTYLAMGWLSLIVIYQL--AIKLAI-GGVTLLAVGGVVYSLGVIFYVCKRIPY-----NHAIWHGFV  201 (219)
T ss_pred             HHhcCCCc-hHHHHHHHHHHHHHHHHHHHH--HHhCCH-HHHHHHHHHhHHHHhhHHHHccCCCCC-----chhHHHHHH
Confidence            2 123444 234445555555444322211  111221 11111222   2245566666776665     899999988


Q ss_pred             chhHHHHHHH
Q 023882          250 IPLTYIWWSF  259 (276)
Q Consensus       250 ip~~~~wy~f  259 (276)
                      +-=+...|--
T Consensus       202 l~ga~~H~~a  211 (219)
T PRK15087        202 LGGSVCHFLA  211 (219)
T ss_pred             HHHHHHHHHH
Confidence            7766665543

>KOG0748 consensus Predicted membrane proteins, contain hemolysin III domain [General function prediction only; Signal transduction mechanisms]

Probab=83.47  E-value=41  Score=31.83  Aligned_cols=154  Identities=18%  Similarity=0.187  Sum_probs=83.5

Q ss_pred             HhhhhccCCCccc-------hhhHHHhHHHHHHHHHHHHHHhccccchHHHHHH-HHHHHHHHHHHhhhcccccc--ccc
Q 023882          113 SAVFHSRDVDLTE-------KFDYSSAVALLGFSLILAILRSFNVRDEAARVMV-AAPLLAFVTTHILYLNFYKL--DYG  182 (276)
Q Consensus       113 StiFH~RD~~~TE-------klDYf~A~~~vl~~l~~~~~R~~~l~~~~~r~~~-~~~~~~~~~~Hv~yL~~~~f--dY~  182 (276)
                      |+++|+=-.- .|       ||||.+-.+.+.-+......-.|.-... .|.+. .+.++...++=+.-+ ..++  .+-
T Consensus        98 S~~~H~~~~~-s~~~~~~~~~lDY~GIs~li~gS~~~~~yy~f~c~~~-~~~iy~~~~~~lgi~~~~~~l-~~~~~~~~~  174 (286)
T KOG0748|consen   98 SSLYHLFSCH-SEKVSRFFLKLDYAGISLLIIGSFLPIIYYAFYCHPF-FRLIYLPIILVLGLLAIFVSL-SDKFRTPKR  174 (286)
T ss_pred             HHHHHHHhcc-cHHHHHHHHHccHHhhHHHHHHHHHHHHHHhcccchH-HHHHHHHHHHHHHHHHheeec-hhhhCCccc
Confidence            9999985555 44       6899997777666655544433432222 22122 111111111101111 1122  123


Q ss_pred             chhhhHHHHHHHH-HHHHHHHHhhh---cCCc-cc---hHHHHHHHHHHHHHhhhhcCCCcc--cchhh----hHHhhhc
Q 023882          183 WNMKVCVVMAVAQ-LLIWATWAGIT---RHPS-RW---KLWVVVFGGALAMLLEIYDFPPYY--GFLDA----HAIWHAT  248 (276)
Q Consensus       183 YNM~~nv~~G~~~-~~lw~~~~~~~---~~~~-~~---~~~~~vv~~~~a~~LEl~DFpP~~--~~lDA----HALWHl~  248 (276)
                      -+-+++++++... .++=+.+....   +.+. ..   ....-.++..+|..+=....|--+  +.+|-    |-+||..
T Consensus       175 r~~R~~~f~~~~~~~i~P~~h~~~~~g~~~~~~~~~~~~~~~~~~~yi~ga~fY~~riPER~~PGkfD~~G~SHQifHv~  254 (286)
T KOG0748|consen  175 RPLRAGVFLLLGLSGILPLLHRLILFGGRGPEVVIALGYVILMAVLYLLGALFYATRIPERWFPGKFDIWGHSHQIFHVL  254 (286)
T ss_pred             hhhHHHHHHHHHHhhccHhhhheeeecCCccceehhhhHHHHHHHHHHHHHHHhhcCCCcccCCCccceeCChhHHHHHH
Confidence            4677777776532 12111121111   1000 11   111234455677888888888743  35564    9999999


Q ss_pred             cchhHHHHHHHHHHHHhHHHH
Q 023882          249 TIPLTYIWWSFIRDDAEFQTA  269 (276)
Q Consensus       249 Tip~~~~wy~fl~~D~~~~~~  269 (276)
                      .+--++.+++=.+.|.+.+.+
T Consensus       255 vv~~a~~~~~a~~~~~~~~~~  275 (286)
T KOG0748|consen  255 VVLAALFHLEAVLLDYEWRHS  275 (286)
T ss_pred             HHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999998765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	276
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 6e-06
 Identities = 48/286 (16%), Positives = 81/286 (28%), Gaps = 76/286 (26%)

Query: 45  PFIRVYGI-----QEPASVAFSVLN-----LAMHFHG-WLSFFILLYYKLPLKQTKKAYY 93
             + + G+          VA  V         M F   WL+       +  L+  +K  Y
Sbjct: 151 KNVLIDGVLGSGKT---WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLY 207

Query: 94  EFSPLWHIYGFLSMNSWFWSAVFHSRDVDLTEKFDYSSAVALLGFSLIL------AILRS 147
           +  P W      S N         +    L +   Y + +      L+L          +
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL------LVLLNVQNAKAWNA 261

Query: 148 FNV--------RDEAARVMVAAPLLAFVTTHI----LYLNFYKLDYG------W-NMKVC 188
           FN+        R +     V   L A  TTHI      +     D        + + +  
Sbjct: 262 FNLSCKILLTTRFKQ----VTDFLSAATTTHISLDHHSMTLTP-DEVKSLLLKYLDCRPQ 316

Query: 189 ----VVMAVAQLLIWATWAGITRHPSRWKLWVVVFGGALAMLLEI-------YDFPPYYG 237
                V+      +      I    + W  W  V    L  ++E         ++   + 
Sbjct: 317 DLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFD 376

Query: 238 FL-----DAHAIWHATTIP---LTYIWWSFIRDDAEFQTANMLKKA 275
            L      AH       IP   L+ IW+  I+ D       + K +
Sbjct: 377 RLSVFPPSAH-------IPTILLSLIWFDVIKSDVMVVVNKLHKYS 415

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00