Citrus Sinensis ID: 023883

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270------
Protein Sequence
MAENNKPGEIKDFQIMIANKDDSTKKLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAAGASVSEQGNSVSAGLHTKIEGLGPGVGSINRANWTMMSANFGRSQIPSGVWPTINGTGSGFIQNSGQLTSNFGSENLSLSANPKFGFHGIEFPNMNMGLMSFSSMLSGASHQIPGLELGLSQDAHVGVMNSQAISQFYQQMGHHRSASGSLNQQHQHQQQISDKDDSQGSGSRQ
Secondary Structure (PSIPRED)
cccccccccccccHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHcHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccEEEEEcccccccccccccccccccccEEcccccEEEccHHHHHHHHHHHHHHccccccHHHHHHHHHccHHHHHccccccccccEccccccccccccccccccHHcccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccEEcccccccEEEccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
maennkpgeikDFQIMIAnkddstkklapkrssnkdrhkkvdgrgrrirMPALCAARIFQLTRelghksdgETIQWLLQQAEpsiiaatgtgtipASMLAAAGasvseqgnsvsaglhtkieglgpgvgsinrANWTMMsanfgrsqipsgvwptingtgsgfiqnsgqltsnfgsenlslsanpkfgfhgiefpnmnmglMSFSSMlsgashqipglelglsqdahvgVMNSQAISQFYQQmghhrsasgslnqqhqhqqqisdkddsqgsgsrq
Flexible Loop (DISEMBL)
maennkpgeikdfqimiankddstkklapkrssnkdrhkkvdgrgrrirmpaLCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAAGASVSEQGNSVSAGLHTKIEGLGPGVGSINRANWTMMSANFGRSQIPSGVWPTINGTGSGFIQNSGQLTSNFGSENLSLSANPKFGFHGIEFPNMNMGLMSFSSMLSGASHQIPGLELGLSQDAHVGVMNSQAISQFYQQMGHHRSASGSLNQQHQHqqqisdkddsqgsgsrq
Low Complexity Region (SEG)
MAENNKPGEIKDFQIMIANKDDSTKKLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAAGASVSEQGNSVSAGLHTKIEGLGPGVGSINRANWTMMSANFGRSQIPSGVWPTINGTGSGFIQNSGQLTSNFGSENLSLSANPKFGFHGIEFPnmnmglmsfssmlsgASHQIPGLELGLSQDAHVGVMNSQAISQFYQQMGHHRSAsgslnqqhqhqqqisdkddsqgsgsrq
Disordered region (IsUnstruct)
***********************************************IRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLA****************LHTKIEGLGPGVGSINRANWTMMSANFGRSQIPSGVWPTINGTGSGFIQN*****************NPKFGFHGIEFPNMNMGLMSFS*********IPGLELGLS*DAHVGVM*********************************************
Disordered Region (DISOPRED)
*************************************************MPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAAT***************************************************************************************************FHGIEF**********************************************************************************
Disordered Region (DISEMBL)
MAENNKPGEIKDFQIMIANKDD********************GRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASML**************SAGLHTKIEGLGPGVGSINRANWTMMSANFGRSQIPSGVWPTINGTGSGFIQNSGQLTSNFGSENLSLSANPKFGFHGIEFPNMNMGLMSFSSMLSGASHQIPGLELGLSQDAHVGVMNSQAISQFYQ***********************************
Disordered Region (DISPRO)
********EIKDFQIMIANK******************KKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAA************************************************GVWP******SGFIQNSGQLTSNFGSENLSLSANPKFGFHGIEFPNMNMGLMSFSSMLSGASHQIPGLELGLSQDAHVGVMNSQAISQFYQQMGHHR*****************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAENNKPGEIKDFQIMIANKDDSTKKLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAAGASVSEQGNSVSAGLHTKIEGLGPGVGSINRANWTMMSANFGRSQIPSGVWPTINGTGSGFIQNSGQLTSNFGSENLSLSANPKFGFHGIEFPNMNMGLMSFSSMLSGASHQIPGLELGLSQDAHVGVMNSQAISQFYQQMGHHRSASGSLNQQHQHQQQISDKDDSQGSGSRQ
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	276	2.2.26 [Sep-21-2011]
Q9LSD5	314	Transcription factor TCP2	yes	no	0.938	0.824	0.512	2e-60
Q9C9L2	325	Transcription factor TCP1	no	no	0.268	0.227	0.824	1e-32
Q93Z00	489	Transcription factor TCP1	no	no	0.275	0.155	0.828	3e-32
Q9C518	401	Transcription factor TCP8	no	no	0.304	0.209	0.729	7e-31
O64647	356	Transcription factor TCP9	no	no	0.268	0.207	0.783	4e-30
Q9LT89	293	Transcription factor TCP1	no	no	0.282	0.266	0.743	1e-29
Q9C7G4	375	Transcription factor TCP2	no	no	0.246	0.181	0.823	2e-29
Q9FMX2	250	Transcription factor TCP7	no	no	0.333	0.368	0.684	2e-29
Q9LQF0	341	Transcription factor TCP2	no	no	0.311	0.252	0.727	2e-29
Q53PH2	448	Transcription factor PCF3	no	no	0.235	0.145	0.846	8e-29

>sp|Q9LSD5|TCP20_ARATH Transcription factor TCP20 OS=Arabidopsis thaliana GN=TCP20 PE=1 SV=1

 Score =  232 bits (592), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 147/287 (51%), Positives = 184/287 (64%), Gaps = 28/287 (9%)

Query: 3   ENNKPG-EIKDFQIMIANKDDSTKK-------LAPKRSSNKDRHKKVDGRGRRIRMPALC 54
           EN KP  EIKDFQI+++  D    K       L PKRSSNKDRH KV+GRGRRIRMPALC
Sbjct: 39  ENRKPTTEIKDFQIVVSASDKEPNKKSQNQNQLGPKRSSNKDRHTKVEGRGRRIRMPALC 98

Query: 55  AARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAAGASVS-EQGNSV 113
           AARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATG+GTIPAS LA++ A+ +  QG S+
Sbjct: 99  AARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALASSAATSNHHQGGSL 158

Query: 114 SAGLHTKIEGLGPGVGSINRANWTMMSAN-FGRSQIPSGVWPTINGTGSGFIQNSGQLTS 172
           +AGL    +  G    S    NW +       RS +P+G+WP + G GSG +  +G ++ 
Sbjct: 159 TAGLMISHDLDGGSSSSGRPLNWGIGGGEGVSRSSLPTGLWPNVAGFGSG-VPTTGLMSE 217

Query: 173 NFGSENLSLSANPKFGFHGIEFPNMNMGLMSFSSMLSGASHQIPGLELGLSQDAHVGVMN 232
             G          + GF G +FP   +G MSF+S+L G  +Q+PGLELGLSQ+ +VGV+N
Sbjct: 218 GAGY---------RIGFPGFDFP--GVGHMSFASILGGNHNQMPGLELGLSQEGNVGVLN 266

Query: 233 SQAISQFY------QQMGHHRSASGSLNQQHQHQQQISDKDDSQGSG 273
            Q+ +Q Y      Q     R      +   +HQQ+  +KDDSQGSG
Sbjct: 267 PQSFTQIYQQMGQAQAQAQGRVLHHMHHNHEEHQQESGEKDDSQGSG 313

Transcription factor that binds to the site II motif (3'-TGGGCC/T-5') in the promoter of PCNA-2 and to 3'-GCCCG/A-5' elements in the promoters of cyclin CYCB1-1 and ribosomal protein genes.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9C9L2|TCP15_ARATH Transcription factor TCP15 OS=Arabidopsis thaliana GN=TCP15 PE=2 SV=1

 Score =  140 bits (352), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 61/74 (82%), Positives = 69/74 (93%)

Query: 25  KKLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPS 84
           KK  PKR+S KDRH KV+GRGRRIRMPA+CAAR+FQLTRELGHKSDGETI+WLLQQAEP+
Sbjct: 43  KKPPPKRTSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPA 102

Query: 85  IIAATGTGTIPASM 98
           +IAATGTGTIPA+ 
Sbjct: 103 VIAATGTGTIPANF 116

Arabidopsis thaliana (taxid: 3702)

>sp|Q93Z00|TCP14_ARATH Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=1 SV=1

 Score =  139 bits (349), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 63/76 (82%), Positives = 69/76 (90%)

Query: 23  STKKLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAE 82
           + KK   KR+S KDRH KVDGRGRRIRMPALCAAR+FQLTRELGHKSDGETI+WLLQQAE
Sbjct: 106 AAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAE 165

Query: 83  PSIIAATGTGTIPASM 98
           PS+IAATGTGTIPA+ 
Sbjct: 166 PSVIAATGTGTIPANF 181

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C518|TCP8_ARATH Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=2 SV=1

 Score =  134 bits (337), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 62/85 (72%), Positives = 73/85 (85%), Gaps = 1/85 (1%)

Query: 31  RSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATG 90
           + S KDRH KVDGRGRRIRMPALCAAR+FQLTRELGHKSDGETI+WLLQQAEP+I+AATG
Sbjct: 57  KRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATG 116

Query: 91  TGTIPASMLAAAGASVSEQGNSVSA 115
           TGTIPA+  +    S+   G+++SA
Sbjct: 117 TGTIPAN-FSTLSVSLRSSGSTLSA 140

Arabidopsis thaliana (taxid: 3702)

>sp|O64647|TCP9_ARATH Transcription factor TCP9 OS=Arabidopsis thaliana GN=TCP9 PE=2 SV=1

 Score =  131 bits (330), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 58/74 (78%), Positives = 66/74 (89%)

Query: 30  KRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAAT 89
           KR+S KDRH KV+GRGRRIRMPA CAARIFQLTRELGHKSDGETI+WLL+ AEP+IIAAT
Sbjct: 71  KRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLENAEPAIIAAT 130

Query: 90  GTGTIPASMLAAAG 103
           GTGT+PA  ++  G
Sbjct: 131 GTGTVPAIAMSVNG 144

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LT89|TCP19_ARATH Transcription factor TCP19 OS=Arabidopsis thaliana GN=TCP19 PE=2 SV=1

 Score =  130 bits (326), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 58/78 (74%), Positives = 69/78 (88%)

Query: 26  KLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSI 85
           K APKR ++KDRH KV+GRGRRIRMPA CAAR+FQLTRELGHKSDGETI+WLL++AEP+I
Sbjct: 49  KPAPKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAI 108

Query: 86  IAATGTGTIPASMLAAAG 103
           I ATGTGT+PA  ++  G
Sbjct: 109 IEATGTGTVPAIAVSVNG 126

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C7G4|TCP22_ARATH Transcription factor TCP22 OS=Arabidopsis thaliana GN=TCP22 PE=2 SV=1

 Score =  129 bits (325), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 56/68 (82%), Positives = 63/68 (92%)

Query: 31  RSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATG 90
           +   KDRH KVDGRGRRIRMPA+CAAR+FQLTRELGHKSDGETI+WLLQQAEP+IIA+TG
Sbjct: 60  KKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIASTG 119

Query: 91  TGTIPASM 98
           TGTIPA+ 
Sbjct: 120 TGTIPANF 127

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FMX2|TCP7_ARATH Transcription factor TCP7 OS=Arabidopsis thaliana GN=TCP7 PE=2 SV=1

 Score =  129 bits (324), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/95 (68%), Positives = 74/95 (77%), Gaps = 3/95 (3%)

Query: 30  KRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAAT 89
           K+   KDRH KVDGRGRRIRMP +CAAR+FQLTRELGHKSDG+TI+WLL+QAEPSIIAAT
Sbjct: 35  KKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAAT 94

Query: 90  GTGTIPASMLAAAGASVSEQGNSVSAGLHTKIEGL 124
           GTGT PAS    + ASVS +G + S  L  K   L
Sbjct: 95  GTGTTPASF---STASVSIRGATNSTSLDHKPTSL 126

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LQF0|TCP23_ARATH Transcription factor TCP23 OS=Arabidopsis thaliana GN=TCP23 PE=1 SV=1

 Score =  129 bits (324), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/88 (72%), Positives = 75/88 (85%), Gaps = 2/88 (2%)

Query: 30  KRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAAT 89
           KR S KDRH KVDGRGRRIRMPA+CAAR+FQLTREL HKSDGETI+WLLQQAEP+IIAAT
Sbjct: 52  KRPS-KDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEWLLQQAEPAIIAAT 110

Query: 90  GTGTIPASMLAAAGASVSEQGNSVSAGL 117
           GTGTIPA+ ++    S+   G+++SA L
Sbjct: 111 GTGTIPAN-ISTLNISLRSSGSTLSAPL 137

Arabidopsis thaliana (taxid: 3702)

>sp|Q53PH2|PCF3_ORYSJ Transcription factor PCF3 OS=Oryza sativa subsp. japonica GN=PCF3 PE=2 SV=1

 Score =  127 bits (320), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 55/65 (84%), Positives = 62/65 (95%)

Query: 34  NKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGT 93
            KDRH KV+GRGRRIRMPALCAAR+FQLTRELGHK+DGETI+WLLQQAEP+I+AATGTGT
Sbjct: 152 TKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAIVAATGTGT 211

Query: 94  IPASM 98
           IPA+ 
Sbjct: 212 IPANF 216

Transcription activator. Binds the promoter core sequence 5'-GGNCC-3'.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	276
224053523	302	predicted protein [Populus trichocarpa]	0.963	0.880	0.733	1e-107
255547638	302	transcription factor, putative [Ricinus	0.978	0.894	0.750	1e-104
224075529	302	predicted protein [Populus trichocarpa]	0.956	0.874	0.712	3e-97
255543685	320	transcription factor, putative [Ricinus	0.952	0.821	0.630	2e-81
225451501	296	PREDICTED: transcription factor TCP20-li	0.960	0.895	0.613	1e-80
224055761	320	predicted protein [Populus trichocarpa]	0.949	0.818	0.608	2e-79
255641555	329	unknown [Glycine max]	0.974	0.817	0.582	7e-76
356571569	330	PREDICTED: transcription factor TCP20-li	0.974	0.815	0.580	1e-74
224129072	321	predicted protein [Populus trichocarpa]	0.938	0.806	0.597	1e-73
449460578	296	PREDICTED: transcription factor TCP20-li	0.880	0.820	0.582	2e-72

>gi|224053523|ref|XP_002297855.1| predicted protein [Populus trichocarpa] gi|222845113|gb|EEE82660.1| predicted protein [Populus trichocarpa]

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 198/270 (73%), Positives = 221/270 (81%), Gaps = 4/270 (1%)

Query: 4   NNKPGEIKDFQIMIANKDDSTKKLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTR 63
           N +P EIKD QIMI N+D + K+LAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTR
Sbjct: 34  NKQPAEIKDLQIMIENRDHNKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTR 93

Query: 64  ELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAAGASVSEQGNSVSAGLHTKIEG 123
           ELG+KSDGETIQWLLQQAEPSIIAATGTGT PAS LA AGASVSEQGNSVS GLHTK+EG
Sbjct: 94  ELGNKSDGETIQWLLQQAEPSIIAATGTGTFPASALAVAGASVSEQGNSVSTGLHTKMEG 153

Query: 124 LGPG-VGSINRANWTMMSANFGRSQIPSGVWPTINGTGSGFIQNSGQLTSNFGSENLSLS 182
           LGP  VGS +R NWTMM+ N GRS + SGVWP++ G GSGF+ NSGQ TSNFG+EN +  
Sbjct: 154 LGPAVVGSRDRTNWTMMNTNLGRSNVASGVWPSVGGIGSGFVPNSGQSTSNFGNENSTTL 213

Query: 183 ANPKFGFHGIEFPNMNMGLMSFSSMLSGASHQIPGLELGLSQDAHVGVMNSQAISQFYQQ 242
             PK+GFHG+EFPN+NMGLMSF SM SG + Q PGLELGLSQD H G+ N QA++ F QQ
Sbjct: 214 --PKYGFHGVEFPNINMGLMSFYSMFSGTNQQFPGLELGLSQDGHGGMFNPQALNPFCQQ 271

Query: 243 MGHHRSASGSLNQQHQHQQQISDKDDSQGS 272
           M   R    SLNQ+ Q Q+Q  DKDDSQGS
Sbjct: 272 MVQGRGVLNSLNQE-QQQEQPHDKDDSQGS 300

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547638|ref|XP_002514876.1| transcription factor, putative [Ricinus communis] gi|223545927|gb|EEF47430.1| transcription factor, putative [Ricinus communis]

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 208/277 (75%), Positives = 235/277 (84%), Gaps = 7/277 (2%)

Query: 1   MAENN----KPGEIKDFQIMIANKDDSTKKLAPKRSSNKDRHKKVDGRGRRIRMPALCAA 56
           MAEN+    K  EIKDFQIMIANKDD+ K+LAPKRSSNKDRHKKVDGRGRRIRMPALCAA
Sbjct: 26  MAENSSSSSKTAEIKDFQIMIANKDDNKKQLAPKRSSNKDRHKKVDGRGRRIRMPALCAA 85

Query: 57  RIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAAGASVSEQGNSVSAG 116
           RIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPAS LAAAGASVS+QGNSVSAG
Sbjct: 86  RIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGASVSQQGNSVSAG 145

Query: 117 LHTKIEGLGPGVGSINRANWTMMSANFGRSQIPSGVWP-TINGTGSGFIQNSGQLTSNFG 175
           LH+K+EG+GP VGS +RANWTMM++N GR  + +G+WP ++ G G+G+I NS Q   NFG
Sbjct: 146 LHSKMEGIGPSVGSRDRANWTMMNSNLGRCNVTNGMWPSSVGGIGAGYISNSSQSAMNFG 205

Query: 176 SENLSLSANPKFGFHGIEFPNMNMGLMSFSSMLSGASHQIPGLELGLSQDAHVGVMNSQA 235
           +E  S +A PKFGFHG+E PN+NMGLMSF SM +  + Q+PGLELGLSQD H GVMNSQA
Sbjct: 206 NE--SANALPKFGFHGVELPNINMGLMSFYSMFNATNQQVPGLELGLSQDGHTGVMNSQA 263

Query: 236 ISQFYQQMGHHRSASGSLNQQHQHQQQISDKDDSQGS 272
           +SQFYQQMG +R+   SL QQ QHQQQ  DKDDSQGS
Sbjct: 264 LSQFYQQMGQNRTGLNSLVQQQQHQQQPPDKDDSQGS 300

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224075529|ref|XP_002304668.1| predicted protein [Populus trichocarpa] gi|222842100|gb|EEE79647.1| predicted protein [Populus trichocarpa]

 Score =  360 bits (925), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 191/268 (71%), Positives = 218/268 (81%), Gaps = 4/268 (1%)

Query: 6   KPGEIKDFQIMIANKDDSTKKLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTREL 65
           KP +I+DFQ M+A+KDDS KKLAPKRSSNKDRHKKV+GRGRRIR+PALCAARIFQLTREL
Sbjct: 36  KPADIEDFQNMMADKDDSKKKLAPKRSSNKDRHKKVEGRGRRIRIPALCAARIFQLTREL 95

Query: 66  GHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAAGASVSEQGNSVSAGLHTKIEGLG 125
            HKSDGETIQWLLQQAEPSIIAATGTGTIPAS LAAAGASVSEQG SVS GLH K+EGLG
Sbjct: 96  EHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGASVSEQGGSVSTGLHAKMEGLG 155

Query: 126 PGV-GSINRANWTMMSANFGRSQIPSGVWPTINGTGSGFIQNSGQLTSNFGSENLSLSAN 184
           PGV GS +R +WT+ +   G S + +GVWP++ G G GF+ NSGQ TSNFG+EN   S  
Sbjct: 156 PGVTGSRDRNDWTLSNTKLGISNVATGVWPSVGGIGLGFVPNSGQSTSNFGNEN--SSTL 213

Query: 185 PKFGFHGIEFPNMNMGLMSFSSMLSGASHQIPGLELGLSQDAHVGVMNSQAISQFYQQMG 244
           PK+GF G+EFPN+NMGLMSF SM SG + Q+PGLELGLSQD H  ++N QA+S FY QM 
Sbjct: 214 PKYGFQGVEFPNINMGLMSFYSMFSGTNQQLPGLELGLSQDGHSAMLNPQALSPFYHQMV 273

Query: 245 HHRSASGSLNQQHQHQQQISDKDDSQGS 272
             R    SLNQ+ Q Q+Q  DKDDSQGS
Sbjct: 274 QGRGVLDSLNQEKQ-QEQPPDKDDSQGS 300

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255543685|ref|XP_002512905.1| transcription factor, putative [Ricinus communis] gi|223547916|gb|EEF49408.1| transcription factor, putative [Ricinus communis]

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 174/276 (63%), Positives = 200/276 (72%), Gaps = 13/276 (4%)

Query: 5   NKPGEIKDFQIMIANKDDSTKKLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRE 64
           NKP EIKDFQI+IA+K++  K+LAPKRSSNKDRH KV+GRGRRIRMPALCAARIFQLTRE
Sbjct: 50  NKPAEIKDFQIVIADKEEQKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRE 109

Query: 65  LGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAAGASVSEQGNSVSAGLHTKIEGL 124
           LGHKSDGETIQWLLQQAEPSIIAATGTGTIPAS L AAG SVS+QG S+SAGLH KI+ L
Sbjct: 110 LGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALVAAGGSVSQQGTSLSAGLHQKIDDL 169

Query: 125 G---PGVGSINRANWTMMSANFGRSQ--IPSGVWPTINGTG-SGFIQNSGQLTSNFGSEN 178
           G       S +R +W M+  N GR      +G+WP + G G       +G +TSN G+E 
Sbjct: 170 GGSSSITSSNSRTSWAMVGGNLGRPHHVATTGLWPPVGGFGFQSSSTTTGPVTSNLGNE- 228

Query: 179 LSLSANPKFGFHGIEFPNMNMGLMSFSSMLSGASHQ-IPGLELGLSQDAHVGVMNSQAIS 237
            S S   K GF G + P  NMG MSF+S+L G S+Q IPGLELGLSQD H+GV+NSQA S
Sbjct: 229 -SSSYLQKIGFPGFDLPGNNMGPMSFTSILGGTSNQQIPGLELGLSQDGHIGVLNSQAFS 287

Query: 238 QFYQQMGHHRSASGSLNQQHQHQQQISDKDDSQGSG 273
           Q YQQMG  R      +Q  Q+      KDDSQGSG
Sbjct: 288 QIYQQMGQARVQHQHQHQHQQN----PAKDDSQGSG 319

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225451501|ref|XP_002271949.1| PREDICTED: transcription factor TCP20-like [Vitis vinifera]

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 168/274 (61%), Positives = 202/274 (73%), Gaps = 9/274 (3%)

Query: 5   NKPGEIKDFQIMIANKDDSTKKLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRE 64
           NKP E+KDFQI+IA+K++  K+LAPKRSSNKDRH KV+GRGRRIRMPALCAARIFQLTRE
Sbjct: 26  NKPAEVKDFQIVIADKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRE 85

Query: 65  LGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAAGASVSEQGNSVSAGLHTKIEGL 124
           LGHKSDGETIQWLLQQAEPSIIAATGTGTIPAS LAAAG SVS+QG S+SAGLH KI+ L
Sbjct: 86  LGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGGSVSQQGTSISAGLHQKIDEL 145

Query: 125 --GPGVGSINRANWTMMSANFGRSQIPSGVWPTINGTGSGFIQNSGQLTSNFGSENLSLS 182
                    +R +W M+ AN GR  + +G+WP +  +G GF  +SG  T+N G+E+ +  
Sbjct: 146 GGSSIGSGSSRTSWAMVGANLGRPHVATGLWPPV--SGFGFQSSSGPSTTNLGNESSNYL 203

Query: 183 ANPKFGFHGIEFPNMNMGLMSFSSMLSGASHQIPGLELGLSQDAHVGVMNSQAISQFYQQ 242
              K  F G + P  N+G MSF+S+L G++ Q+PGLELGLSQD H+GV+NSQA+SQ YQQ
Sbjct: 204 Q--KIAFPGFDLPATNLGPMSFTSILGGSNQQLPGLELGLSQDGHIGVLNSQALSQIYQQ 261

Query: 243 MGHHRSASGSLNQQHQHQQQISD---KDDSQGSG 273
           MG  R      +Q     Q       KDDSQGSG
Sbjct: 262 MGQARVHQQQQHQHQHQHQHQQQPPAKDDSQGSG 295

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224055761|ref|XP_002298640.1| predicted protein [Populus trichocarpa] gi|222845898|gb|EEE83445.1| predicted protein [Populus trichocarpa]

 Score =  301 bits (771), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 168/276 (60%), Positives = 202/276 (73%), Gaps = 14/276 (5%)

Query: 4   NNKPGEIKDFQIMIANKDDSTKKLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTR 63
           +NKP EIKDFQI++A+K++  K+LAPKRSSNKDRH KV+GRGRRIRMPALCAARIFQLTR
Sbjct: 52  DNKPAEIKDFQIVVADKEEQKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTR 111

Query: 64  ELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAAGASVSEQGNSVSAGLHTKIEG 123
           ELGHKSDGETIQWLLQQAEPSIIAATGTGTIPAS LAAAG ++S+QG S+SAGLH KI+ 
Sbjct: 112 ELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGGAISQQGASLSAGLHQKIDD 171

Query: 124 LGPGVGSINRANWTMMSANFGRSQ--IPSGVWPTINGTGSGFIQNS-GQLTSNFGSENLS 180
           L  G  S +RA+W M+  N GR      +G+WP + G G     NS G  T+N G+E  +
Sbjct: 172 L--GGSSSSRASWAMLGGNLGRPHHVTTAGLWPPVGGYGFQSSSNSTGPSTTNIGTEAAA 229

Query: 181 LSANP---KFGFHGIEFPNMNMGLMSFSSMLSGASHQIPGLELGLSQDAHVGVMNSQAIS 237
              +    K GF G + P  NMG MSF+S+L G + Q+PGLELGLSQD H+GV++ QA++
Sbjct: 230 AGGSSYLQKLGFPGFDLPGNNMGPMSFTSILGGGTQQLPGLELGLSQDGHIGVLSPQALN 289

Query: 238 QFYQQMGHHRSASGSLNQQHQHQQQISDKDDSQGSG 273
           Q YQQMGH R       QQ+        KDDSQGSG
Sbjct: 290 QIYQQMGHARVHQQQHQQQN------PSKDDSQGSG 319

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255641555|gb|ACU21051.1| unknown [Glycine max]

 Score =  289 bits (740), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 169/290 (58%), Positives = 201/290 (69%), Gaps = 21/290 (7%)

Query: 4   NNKPGEIKDFQIMIANKDDSTKK---LAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQ 60
            NKP E+KDFQI++A + D +KK   LAPKRSSNKDRH KV+GRGRRIRMPALCAARIFQ
Sbjct: 39  ENKPSEVKDFQIVVAAEKDESKKQQQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQ 98

Query: 61  LTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAAGASVSEQGNSVSAGL--- 117
           LTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPAS LAAAG S+S QG+S+S+ L   
Sbjct: 99  LTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGNSLSPQGSSLSSALHHQ 158

Query: 118 HTKIEGLGPGVGSINRANWTMMSANFGRSQI---PSGVWPTINGTGSGFIQNSGQLTSNF 174
           H KI+ LG G G  +RA+W M+  N GR  +    +G+WP  + +G GF   +   T++ 
Sbjct: 159 HQKIDELGCGSGGSSRASWQMVGGNLGRPHLGVATTGLWPP-HVSGFGFQTATTTTTTSS 217

Query: 175 GSENLSLSANP-----KFGFHGIEFPN--MNMGLMSFSSMLSGA-SHQIPGLELGLSQDA 226
           G  N +L+        K  F G + P    NMG MSF+S+L GA S Q+PGLELGLSQD 
Sbjct: 218 GPSNATLATESSNYLQKIAFPGFDLPTSATNMGHMSFTSILGGAGSQQMPGLELGLSQDG 277

Query: 227 HVGVMNSQAISQFYQQMGHHRSA---SGSLNQQHQHQQQISDKDDSQGSG 273
           H+GV+N QA++Q YQQM H   A         Q Q  QQ   KDDSQGSG
Sbjct: 278 HIGVLNPQALNQIYQQMNHQAQAGRVHQQHQHQQQQHQQTPAKDDSQGSG 327

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356571569|ref|XP_003553949.1| PREDICTED: transcription factor TCP20-like [Glycine max]

 Score =  285 bits (730), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 169/291 (58%), Positives = 201/291 (69%), Gaps = 22/291 (7%)

Query: 4   NNKPGEIKDFQIMIANKDDSTKK---LAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQ 60
            NKP E+KDFQI++A + D +KK   LAPKRSSNKDRH KV+GRGRRIRMPALCAARIFQ
Sbjct: 39  ENKPSEVKDFQIVVAAEKDESKKQQQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQ 98

Query: 61  LTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAAGASVSEQGNSVSAGL--- 117
           LTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPAS LAAAG S+S QG+S+S+ L   
Sbjct: 99  LTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGNSLSPQGSSLSSALHHQ 158

Query: 118 HTKIEGLGPGVGSINRANWTMMSANFGRSQI---PSGVWPTINGTGSGF-IQNSGQLTSN 173
           H KI+ LG G G  +RA+W M+  N GR  +    +G+WP  + +G GF    +   T++
Sbjct: 159 HQKIDELGCGSGGSSRASWQMVGGNLGRPHLGVATTGLWPP-HVSGFGFQTATTTTTTTS 217

Query: 174 FGSENLSLSANP-----KFGFHGIEFPN--MNMGLMSFSSMLSGA-SHQIPGLELGLSQD 225
            G  N +L+        K  F G + P    NMG MSF+S+L GA S Q+PGLELGLSQD
Sbjct: 218 SGPSNATLATESSNYLQKIAFPGFDLPTSATNMGHMSFTSILGGAGSQQMPGLELGLSQD 277

Query: 226 AHVGVMNSQAISQFYQQMGHHRSA---SGSLNQQHQHQQQISDKDDSQGSG 273
            H+GV+N QA++Q YQQM H   A         Q Q  QQ   KDDSQGSG
Sbjct: 278 GHIGVLNPQALNQIYQQMNHQAQAGRVHQQHQHQQQQHQQTPAKDDSQGSG 328

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129072|ref|XP_002328883.1| predicted protein [Populus trichocarpa] gi|222839313|gb|EEE77650.1| predicted protein [Populus trichocarpa]

 Score =  282 bits (721), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 163/273 (59%), Positives = 193/273 (70%), Gaps = 14/273 (5%)

Query: 5   NKPGEIKDFQIMIANKDDSTKKLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRE 64
           NK  EIKDFQI++A+K++  K+LAPKRSSNKDRH KV+GRGRRIRMPALCAARIFQLTRE
Sbjct: 58  NKAAEIKDFQIVVADKEEQKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRE 117

Query: 65  LGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAAGASVSEQGNSVSAGLHTKIEGL 124
           LGHKSDGETIQWLLQQAEPSIIAATGTGTIPAS LAAAG ++S+QG S+SAGLH KI+ +
Sbjct: 118 LGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGGAISQQGASLSAGLHQKIDDI 177

Query: 125 GPGVGSINRANWTMMSANFGRS-QIPS-GVWPTINGTGSGFIQN-SGQLTSNFGSENLSL 181
             G  S  R +W M+  N GR  Q+ S G+WP + G G     N +G  T+N  SE    
Sbjct: 178 --GESSSRRTSWAMLGGNLGRPHQVTSAGLWPPVGGYGFQSSSNTTGPSTTNIVSEGGGG 235

Query: 182 SAN-PKFGFHGIEFPNMNMGLMSFSSMLSGASHQIPGLELGLSQDAHVGVMNSQAISQFY 240
           S+   K GF G + P  N+G MS +S+L   S Q+PGLELGLSQD H+GV++ QA+SQ Y
Sbjct: 236 SSYLQKNGFSGFDMPGNNIGPMSLTSILGVGSQQLPGLELGLSQDGHIGVLSPQALSQIY 295

Query: 241 QQMGHHRSASGSLNQQHQHQQQISDKDDSQGSG 273
           QQMG  R                  KDDSQGSG
Sbjct: 296 QQMGQARVQQHQQQN--------PSKDDSQGSG 320

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460578|ref|XP_004148022.1| PREDICTED: transcription factor TCP20-like [Cucumis sativus]

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 166/285 (58%), Positives = 189/285 (66%), Gaps = 42/285 (14%)

Query: 5   NKPGEIKDFQIMIANKDDSTKKLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRE 64
           NKP EIKDFQI IA K++  K+LAPKRSSNKDRH KV+GRGRRIRMPALCAARIFQLTRE
Sbjct: 38  NKPAEIKDFQIAIAEKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRE 97

Query: 65  LGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAAGASVSEQGNSVSAGLHTKIEGL 124
           L HKSDGETIQWLLQQAEPSIIAATGTGTIPAS LAAA  SVS+QG S+SAGLH K+E L
Sbjct: 98  LDHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEL 157

Query: 125 GPGVGSINRANWTMMSANFGRSQI---PSGVWPTINGTGSGF-------------IQNSG 168
           G G  S  RANW       GR  +   P+ +WP+ + TG GF               N  
Sbjct: 158 GGGGSS--RANW-------GRPHLAATPTALWPS-SVTGFGFQSSTAAAAVAAQSATNLP 207

Query: 169 QLTSNFGSENLSLSANPKFGFHGIEFPNMNMGLMSFSSMLSGASHQIPGLELGLSQDAHV 228
             TSN+           K GF   +    NMG MSF+S+L   + Q+PGLELGLSQD H+
Sbjct: 208 NETSNYFH---------KLGFPPFDLTPTNMGPMSFTSILGANTQQLPGLELGLSQDGHI 258

Query: 229 GVMNSQAISQFYQQMGHHRSASGSLNQQHQHQQQISDKDDSQGSG 273
           GV+N QA++Q YQQMG  R        QH HQQ  + KDDSQ S 
Sbjct: 259 GVLNPQALNQIYQQMGQPRV------HQHHHQQPPA-KDDSQDSA 296

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	276
TAIR|locus:2092020	314	TCP20 "AT3G27010" [Arabidopsis	0.829	0.729	0.529	2e-56
TAIR|locus:2196220	401	TCP8 "AT1G58100" [Arabidopsis	0.333	0.229	0.688	2.6e-32
TAIR|locus:2079202	489	TCP14 "AT3G47620" [Arabidopsis	0.344	0.194	0.708	3.3e-31
TAIR|locus:2205065	325	TCP15 "AT1G69690" [Arabidopsis	0.326	0.276	0.714	1.8e-30
TAIR|locus:2014661	341	AT1G35560 "AT1G35560" [Arabido	0.336	0.272	0.670	9.1e-29
TAIR|locus:2163081	243	AT5G41030 "AT5G41030" [Arabido	0.445	0.506	0.433	2.5e-28
TAIR|locus:2030321	375	AT1G72010 "AT1G72010" [Arabido	0.307	0.226	0.724	3.9e-28
TAIR|locus:2166796	250	AT5G23280 "AT5G23280" [Arabido	0.557	0.616	0.470	3.9e-28
TAIR|locus:2150803	239	TCP11 "AT5G08330" [Arabidopsis	0.358	0.414	0.617	6.4e-28
TAIR|locus:2166518	293	AT5G51910 "AT5G51910" [Arabido	0.282	0.266	0.743	1.3e-27

TAIR|locus:2092020 TCP20 "AT3G27010" [Arabidopsis thaliana (taxid:3702)]

 Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
 Identities = 134/253 (52%), Positives = 165/253 (65%)

Query:     3 ENNKPG-EIKDFQIMIANKD-DSTKK------LAPKRSSNKDRHKKVDGRGRRIRMPALC 54
             EN KP  EIKDFQI+++  D +  KK      L PKRSSNKDRH KV+GRGRRIRMPALC
Sbjct:    39 ENRKPTTEIKDFQIVVSASDKEPNKKSQNQNQLGPKRSSNKDRHTKVEGRGRRIRMPALC 98

Query:    55 AARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAAGASVSE-QGNSV 113
             AARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATG+GTIPAS LA++ A+ +  QG S+
Sbjct:    99 AARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALASSAATSNHHQGGSL 158

Query:   114 SAGLHTKIEGLGPGVGSINRA-NWTMMSAN-FGRSQIPSGVWPTINGTGSGFIQNSGQLT 171
             +AGL    + L  G  S  R  NW +       RS +P+G+WP + G GSG +  +G ++
Sbjct:   159 TAGLMISHD-LDGGSSSSGRPLNWGIGGGEGVSRSSLPTGLWPNVAGFGSG-VPTTGLMS 216

Query:   172 SNFGSENLSLSANPKFGFHGIEFPXXXXXXXXXXXXXXXASHQIPGLELGLSQDAHVGVM 231
                G          + GF G +FP                 +Q+PGLELGLSQ+ +VGV+
Sbjct:   217 EGAGY---------RIGFPGFDFPGVGHMSFASILGGNH--NQMPGLELGLSQEGNVGVL 265

Query:   232 NSQAISQFYQQMG 244
             N Q+ +Q YQQMG
Sbjct:   266 NPQSFTQIYQQMG 278

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0009653 "anatomical structure morphogenesis" evidence=TAS

GO:0000987 "core promoter proximal region sequence-specific DNA binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0008361 "regulation of cell size" evidence=IGI

GO:0043565 "sequence-specific DNA binding" evidence=IPI

GO:1900056 "negative regulation of leaf senescence" evidence=IGI

TAIR|locus:2196220 TCP8 "AT1G58100" [Arabidopsis thaliana (taxid:3702)]

 Score = 329 (120.9 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
 Identities = 64/93 (68%), Positives = 75/93 (80%)

Query:    23 STKKLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAE 82
             ST      + S KDRH KVDGRGRRIRMPALCAAR+FQLTRELGHKSDGETI+WLLQQAE
Sbjct:    49 STATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAE 108

Query:    83 PSIIAATGTGTIPASMLAAAGASVSEQGNSVSA 115
             P+I+AATGTGTIPA+  +    S+   G+++SA
Sbjct:   109 PAIVAATGTGTIPANF-STLSVSLRSSGSTLSA 140

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0001047 "core promoter binding" evidence=IDA

TAIR|locus:2079202 TCP14 "AT3G47620" [Arabidopsis thaliana (taxid:3702)]

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 68/96 (70%), Positives = 78/96 (81%)

Query:    23 STKKLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAE 82
             + KK   KR+S KDRH KVDGRGRRIRMPALCAAR+FQLTRELGHKSDGETI+WLLQQAE
Sbjct:   106 AAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAE 165

Query:    83 PSIIAATGTGTIPASMLAAAGASVSEQGNSVSAGLH 118
             PS+IAATGTGTIPA+   +   S+   G+S+S   H
Sbjct:   166 PSVIAATGTGTIPANF-TSLNISLRSSGSSMSLPSH 200

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

GO:0009739 "response to gibberellin stimulus" evidence=IMP

GO:0010029 "regulation of seed germination" evidence=IEP

GO:0008283 "cell proliferation" evidence=IGI

GO:0010229 "inflorescence development" evidence=IGI

GO:0031347 "regulation of defense response" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0009735 "response to cytokinin stimulus" evidence=IMP

TAIR|locus:2205065 TCP15 "AT1G69690" [Arabidopsis thaliana (taxid:3702)]

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 65/91 (71%), Positives = 77/91 (84%)

Query:    25 KKLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPS 84
             KK  PKR+S KDRH KV+GRGRRIRMPA+CAAR+FQLTRELGHKSDGETI+WLLQQAEP+
Sbjct:    43 KKPPPKRTSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPA 102

Query:    85 IIAATGTGTIPASMLAAAGASVSEQGNSVSA 115
             +IAATGTGTIPA+   +   S+    +S+SA
Sbjct:   103 VIAATGTGTIPANF-TSLNISLRSSRSSLSA 132

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0007623 "circadian rhythm" evidence=IMP

GO:0008283 "cell proliferation" evidence=IGI

GO:0010229 "inflorescence development" evidence=IGI

GO:0042023 "DNA endoreduplication" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0009735 "response to cytokinin stimulus" evidence=IGI

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2014661 AT1G35560 "AT1G35560" [Arabidopsis thaliana (taxid:3702)]

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 63/94 (67%), Positives = 76/94 (80%)

Query:    24 TKKLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEP 83
             T    P +  +KDRH KVDGRGRRIRMPA+CAAR+FQLTREL HKSDGETI+WLLQQAEP
Sbjct:    45 TAAKTPAKRPSKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEWLLQQAEP 104

Query:    84 SIIAATGTGTIPASMLAAAGASVSEQGNSVSAGL 117
             +IIAATGTGTIPA+ ++    S+   G+++SA L
Sbjct:   105 AIIAATGTGTIPAN-ISTLNISLRSSGSTLSAPL 137

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2163081 AT5G41030 "AT5G41030" [Arabidopsis thaliana (taxid:3702)]

 Score = 267 (99.0 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
 Identities = 59/136 (43%), Positives = 83/136 (61%)

Query:     3 ENNKPGEIKDFQIMIANK--------DDSTKKLA---PKRSSNKDRHKKVDGRGRRIRMP 51
             +  K  E+K F I++  K        +D   ++     K+  NKDRH KV+GRGRR+R+P
Sbjct:    26 KKRKQTEVKGFDIVVGEKRKKKENEEEDQEIQILYEKEKKKPNKDRHLKVEGRGRRVRLP 85

Query:    52 ALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAAGASVSEQG- 110
              LCAARI+QLT+ELGHKSDGET++WLLQ AEPSI++AT  G  P   + +     ++   
Sbjct:    86 PLCAARIYQLTKELGHKSDGETLEWLLQHAEPSILSATVNGIKPTESVVSQPPLTADLMI 145

Query:   111 -NSVSAGLHTKIEGLG 125
              +SV     T++E  G
Sbjct:   146 CHSVEEASRTQMEANG 161

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2030321 AT1G72010 "AT1G72010" [Arabidopsis thaliana (taxid:3702)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 63/87 (72%), Positives = 73/87 (83%)

Query:    26 KLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSI 85
             K A K+ + KDRH KVDGRGRRIRMPA+CAAR+FQLTRELGHKSDGETI+WLLQQAEP+I
Sbjct:    56 KSAVKKPT-KDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAI 114

Query:    86 IAATGTGTIPASMLAAAGASVSEQGNS 112
             IA+TGTGTIPA+  +   AS+   G S
Sbjct:   115 IASTGTGTIPANF-STLNASLRSGGGS 140

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2166796 AT5G23280 "AT5G23280" [Arabidopsis thaliana (taxid:3702)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 79/168 (47%), Positives = 100/168 (59%)

Query:     4 NNKPGEIKDFQIMIANKD---DSTKKLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQ 60
             NN      +  +MI++     +    +  K+   KDRH KVDGRGRRIRMP +CAAR+FQ
Sbjct:     6 NNNNNNNNNDGLMISSNGALIEQQPSVVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQ 65

Query:    61 LTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAAGASVSEQGNSVSAGLHTK 120
             LTRELGHKSDG+TI+WLL+QAEPSIIAATGTGT PAS    + ASVS +G + S  L  K
Sbjct:    66 LTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASF---STASVSIRGATNSTSLDHK 122

Query:   121 ----IEGLGPGV-GSINRANWTMMSANFGRSQIPSGVWPTINGTGSGF 163
                 + G  P + G   RA+     +N   +    G   T   T +GF
Sbjct:   123 PTSLLGGTSPFILGKRVRAD---EDSNNSHNHSSVGKDETFTTTPAGF 167

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2150803 TCP11 "AT5G08330" [Arabidopsis thaliana (taxid:3702)]

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 63/102 (61%), Positives = 78/102 (76%)

Query:     1 MAENNKPGEIKDFQIMIANKDDSTKKLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQ 60
             MA+N+  G + +  I++    +     A K+  +KDRH KVDGRGRRIRMP +CAAR+FQ
Sbjct:     1 MADND--GAVSN-GIIVEQTSNKGPLNAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQ 57

Query:    61 LTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASMLAAA 102
             LTRELGHKSDG+TI+WLL+QAEPSIIAATGTGT PAS   A+
Sbjct:    58 LTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTAS 99

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0005515 "protein binding" evidence=IPI

GO:0042752 "regulation of circadian rhythm" evidence=IMP

GO:0043433 "negative regulation of sequence-specific DNA binding transcription factor activity" evidence=IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2166518 AT5G51910 "AT5G51910" [Arabidopsis thaliana (taxid:3702)]

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 58/78 (74%), Positives = 69/78 (88%)

Query:    26 KLAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSI 85
             K APKR ++KDRH KV+GRGRRIRMPA CAAR+FQLTRELGHKSDGETI+WLL++AEP+I
Sbjct:    49 KPAPKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAI 108

Query:    86 IAATGTGTIPASMLAAAG 103
             I ATGTGT+PA  ++  G
Sbjct:   109 IEATGTGTVPAIAVSVNG 126

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0031347 "regulation of defense response" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LSD5	TCP20_ARATH	No assigned EC number	0.5121	0.9384	0.8248	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	276
pfam03634	122	pfam03634, TCP, TCP family transcription factor	4e-37

>gnl|CDD|217650 pfam03634, TCP, TCP family transcription factor

 Score =  127 bits (321), Expect = 4e-37
 Identities = 44/92 (47%), Positives = 56/92 (60%)

Query: 27  LAPKRSSNKDRHKKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSII 86
            A K+  +  RH KV GR RR+R+ A CAAR F L  ELG  S  +TI+WLLQQA+P+II
Sbjct: 1   AAGKKDRHSKRHTKVGGRDRRVRLSAECAARFFDLQDELGFDSPSKTIEWLLQQAKPAII 60

Query: 87  AATGTGTIPASMLAAAGASVSEQGNSVSAGLH 118
           A TGT T PA   +A  A+ S +    +A   
Sbjct: 61  ALTGTSTPPAKCSSAKSAAKSSKDPQQAASAL 92

This is a family of TCP plant transcription factors. TCP proteins were named after the first characterized members (TB1, CYC and PCFs) and they are involved in multiple developmental control pathways. This region contains a DNA binding basic-Helix-Loop-Helix (bHLP) structure. Length = 122

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	276
PF03634	138	TCP: TCP family transcription factor; InterPro: IP	100.0
PLN03105	324	TCP24 transcription factor TCP24 (TEOSINTE BRANCHE	99.93
PLN03106	447	TCP2 Protein TCP2; Provisional	99.93

>PF03634 TCP: TCP family transcription factor; InterPro: IPR005333 The TCP transcription factor family was named after: teosinte branched 1 (tb1, Zea mays (Maize)) [], cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) [] and PCF in rice (Oryza sativa) [, ]

Probab=100.00  E-value=6.1e-35  Score=235.16  Aligned_cols=68  Identities=31%  Similarity=0.547  Sum_probs=63.4

Q ss_pred             CCCCCCccccC----CCCceeecCHHHHHHHHhhhhhhCCCCCchHHHHHHHhchHHHHhhhcCCCCCcchh
Q 023883           32 SSNKDRHKKVD----GRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASML   99 (276)
Q Consensus        32 s~~KDRHSKV~----~RDRRVRLs~~~A~rfF~LQd~LGfdk~skTIeWLL~qak~AI~~atgtgt~pas~~   99 (276)
                      +.+||||||||    +||||||||++||++||+||||||||||||||||||++||+||++++...+.|.+.+
T Consensus         2 ~~~kdrhski~Ta~g~RdRRvRLs~~~Ar~FFdLQDmLGfDKaSKTveWLL~kSk~AIkeL~~~~~~~~s~~   73 (138)
T PF03634_consen    2 AGKKDRHSKIHTAQGPRDRRVRLSLEIARKFFDLQDMLGFDKASKTVEWLLTKSKKAIKELTQSSSSSSSEC   73 (138)
T ss_pred             CCCCCCCCccccccCCCCCceecCHHHHHHHHHHHHHhcCCCCCchHHHHHHhCHHHHHHHHHhhccccccc
Confidence            57899999999    899999999999999999999999999999999999999999999999876666554

The TCP proteins code for structurally related proteins implicated in the evolution of key morphological traits []. However, the biochemical function of CYC and TB1 proteins remains to be demonstrated. One of the conserved regions is predicted to form a non-canonical basic-Helix-Loop-Helix (bHLP) structure. This domain is also found in two rice DNA-binding proteins, PCF1 and PCF2, where it has been shown to be involved in DNA-binding and dimerization. This family of transcription factors are exclusive to higher plants. They can be divided into two groups, TCP-C and TCP-P, that appear to have separated following an early gene duplication event []. This duplication event may have led to functional divergence and it has been proposed that that the TCP-P subfamily are transcriptional repressors, while the TPC-C subfamily are transcription activators [].

>PLN03105 TCP24 transcription factor TCP24 (TEOSINTE BRANCHED1, CYCLOIDEA, AND PCF FAMILY 24); Provisional

Probab=99.93  E-value=1.4e-26  Score=212.00  Aligned_cols=64  Identities=34%  Similarity=0.537  Sum_probs=60.0

Q ss_pred             CCCCCCCCccccC----CCCceeecCHHHHHHHHhhhhhhCCCCCchHHHHHHHhchHHHHhhhcCCC
Q 023883           30 KRSSNKDRHKKVD----GRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGT   93 (276)
Q Consensus        30 krs~~KDRHSKV~----~RDRRVRLs~~~A~rfF~LQd~LGfdk~skTIeWLL~qak~AI~~atgtgt   93 (276)
                      ++.++|||||||+    +||||||||++||++||+||||||||||||||||||++||+||++++...+
T Consensus        46 Ra~g~KDRHSKI~TAqGpRDRRvRLSv~iArkFFdLQDmLGFDKaSKTVEWLL~kSk~AI~ELp~l~~  113 (324)
T PLN03105         46 RASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDLPLLNT  113 (324)
T ss_pred             ccCCCCCcccceecccCCcccceecCHHHHHHHhhHHHHhCCCCcchHHHHHHHHhHHHHHhcccCcc
Confidence            4567999999999    899999999999999999999999999999999999999999999887553

>PLN03106 TCP2 Protein TCP2; Provisional

Probab=99.93  E-value=1.7e-26  Score=218.88  Aligned_cols=63  Identities=33%  Similarity=0.555  Sum_probs=59.8

Q ss_pred             CCCCCCCCccccC----CCCceeecCHHHHHHHHhhhhhhCCCCCchHHHHHHHhchHHHHhhhcCC
Q 023883           30 KRSSNKDRHKKVD----GRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTG   92 (276)
Q Consensus        30 krs~~KDRHSKV~----~RDRRVRLs~~~A~rfF~LQd~LGfdk~skTIeWLL~qak~AI~~atgtg   92 (276)
                      +++++|||||||+    +||||||||++||++||+||||||||||||||||||++||+||++++...
T Consensus        70 Rasg~KDRHSKI~Ta~G~RDRRvRLS~~~ArkFFdLQD~LGfDkaSKTvEWLL~~Sk~AI~EL~~l~  136 (447)
T PLN03106         70 RASGGKDRHSKVLTSKGLRDRRVRLSVSTAIQFYDLQDRLGYDQPSKAVEWLIKAAEDSISELPSLN  136 (447)
T ss_pred             cccCCCCcccceecccCCcccceeccHHHHHHHHhHHHHhCCCCcchHHHHHHHHhHHHHHHhhccc
Confidence            4678999999999    89999999999999999999999999999999999999999999988754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00