Citrus Sinensis ID: 023938

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-----
Protein Sequence
MPPFTFIFTLVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQPMMPDDSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMVAKRREQERNSRTRRQQGKQDVQQGLPADGADVAPGAQQNGVHPHRFSRVAGHNVQLAPTSRVQVQP
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHcHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEcccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccEEEEEccEEEEcccccccccccccccccccccHHHHHHHHHHHccccccccHHHHHHHHHHHHcccccccccHHHHHccccccEcccccccccccccccccccccccEEEEcccccEEccccEEEEcc
Coil and Loop (DISEMBL)
MPPFTFIFTLVILVSAFHLSFagllaepasghdqplkpgeyastntvpafpaqtqAATCRLDLSaelfggvneacgrdldrsrccpVLAAWLFAAHSRyalqvpaaapaaepdqpmmpddsqkCVNSLQSALVsknvkipqpnascdAILCFCgirlhqisslscpaafnvtagfrnvtpTAAVKNLekncrnssysgctKCLGALQMVAKRREQERnsrtrrqqgkqdvqqglpadgadvapgaqqngvhphrfsrvaghnvqlaptsrvqvqp
Flexible Loop (DISEMBL)
MPPFTFIFTLVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQPMMPDDSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEkncrnssysgcTKCLGALQMVAKRReqernsrtrrqqgkqdvqqgLPADGADVAPGAQQNGVHPHRFSRVAghnvqlaptsrvqvqp
Low Complexity Region (SEG)
MPPFTFIFTLVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVpaaapaaepdqpmmpddSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMVAKrreqernsrtrrqqGKQDVQQGLPADGADVAPGAQQNGVHPHRFSRVAGHNVQLAPTSRVQVQP
Disordered region (IsUnstruct)
***FTFIFTLVILVSAFHLSFAGLLA**********************AFPAQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQV********************************NVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMV******************************************************************
Disordered Region (DISOPRED)
****TFIFTLVILVSAFHLSFAG****************************AQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRY*****************MPDDSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGF**VT***AVKNL*KNCRNSSYSGCTKCLG**************************QQGLPADGADVAPGAQ*NGVHPHRFSRVAGHNVQLAPTSR*****
Disordered Region (DISEMBL)
MPPFTFIFTLVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQPMMPDDSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMV************************LPADGADVAPGAQQNGVHPHRFSRVAGHNVQLA*********
Disordered Region (DISPRO)
MPPFTFIFTLVILVSAFHLSFAGLLAE******************TVP*FPA*TQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVP********DQPMMPDDSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMVAKR****************DVQQGLPADGADVAPGAQQNGVHPHRFSRVAGHNVQLAPTSRVQV**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MPPFTFIFTLVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQPMMPDDSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMVAKRREQERNSRTRRQQGKQDVQQGLPADGADVAPGAQQNGVHPHRFSRVAGHNVQLAPTSRVQVQP
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	275	2.2.26 [Sep-21-2011]
Q9SUC9	304	Uncharacterized GPI-ancho	yes	no	0.647	0.585	0.767	7e-79

>sp|Q9SUC9|UGPI7_ARATH Uncharacterized GPI-anchored protein At4g28100 OS=Arabidopsis thaliana GN=At4g28100 PE=1 SV=1

 Score =  293 bits (751), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 139/181 (76%), Positives = 158/181 (87%), Gaps = 3/181 (1%)

Query: 45  NTVPAFPAQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVP 104
           NTVPAFP +TQA +CRLDLS ELFGGVNEACGR+LDRSRCCPVLAAWLFAAH+R ALQ+P
Sbjct: 32  NTVPAFPVETQAQSCRLDLSNELFGGVNEACGRNLDRSRCCPVLAAWLFAAHARSALQLP 91

Query: 105 AAAPAAE---PDQPMMPDDSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQIS 161
           A AP  E   PD+PM PDDSQKCVN+LQSAL++K +KIPQPN+SCDAILCFCGIRLHQIS
Sbjct: 92  APAPTPESSDPDEPMKPDDSQKCVNTLQSALLTKQIKIPQPNSSCDAILCFCGIRLHQIS 151

Query: 162 SLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMVAKRREQERNSRT 221
           SLSCPAAFNV++GF+N TPTAAVKNLEK CRNSSYSGCT+CLGALQ +  R   ++ +  
Sbjct: 152 SLSCPAAFNVSSGFKNATPTAAVKNLEKECRNSSYSGCTRCLGALQKLKVRGGNKKTTTE 211

Query: 222 R 222
           R
Sbjct: 212 R 212

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	275
255553925	318	conserved hypothetical protein [Ricinus	0.723	0.625	0.815	1e-91
224124664	293	predicted protein [Populus trichocarpa]	0.789	0.740	0.744	3e-90
224146708	322	predicted protein [Populus trichocarpa]	0.789	0.673	0.729	3e-90
225447687	324	PREDICTED: uncharacterized GPI-anchored	0.810	0.688	0.697	2e-85
449438052	322	PREDICTED: uncharacterized GPI-anchored	0.843	0.720	0.668	1e-84
356544892	317	PREDICTED: uncharacterized GPI-anchored	0.803	0.697	0.657	1e-80
356515216	318	PREDICTED: uncharacterized GPI-anchored	0.76	0.657	0.680	7e-79
21593735	304	unknown [Arabidopsis thaliana]	0.701	0.634	0.698	2e-77
18417127	304	uncharacterized protein [Arabidopsis tha	0.647	0.585	0.767	4e-77
297799164	304	hypothetical protein ARALYDRAFT_491965 [	0.687	0.621	0.712	6e-77

>gi|255553925|ref|XP_002518003.1| conserved hypothetical protein [Ricinus communis] gi|223542985|gb|EEF44521.1| conserved hypothetical protein [Ricinus communis]

 Score =  342 bits (876), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 163/200 (81%), Positives = 181/200 (90%), Gaps = 1/200 (0%)

Query: 9   TLVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAELF 68
           +++I    F  S AGLLAEP SG +QPLKPG+Y+S NTVPAFP QT++  CRLDLSAELF
Sbjct: 6   SVIIFFYLFTPSLAGLLAEPVSGSNQPLKPGDYSSPNTVPAFPVQTESQVCRLDLSAELF 65

Query: 69  GGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPA-AEPDQPMMPDDSQKCVNS 127
           GGVN+ACGR+LDRSRCCPVLAAWLFAAH+RYALQV A+APA AE D PMMPDDSQKCVNS
Sbjct: 66  GGVNDACGRELDRSRCCPVLAAWLFAAHARYALQVSASAPASAEEDLPMMPDDSQKCVNS 125

Query: 128 LQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNL 187
           LQSAL+S+NVKIPQPNASCDAILCFCGIRLHQI+SLSCPAAFNV++GF N TPTAAVKNL
Sbjct: 126 LQSALLSRNVKIPQPNASCDAILCFCGIRLHQITSLSCPAAFNVSSGFHNATPTAAVKNL 185

Query: 188 EKNCRNSSYSGCTKCLGALQ 207
           EKNC+NSSYSGCTKCLGALQ
Sbjct: 186 EKNCKNSSYSGCTKCLGALQ 205

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124664|ref|XP_002319388.1| predicted protein [Populus trichocarpa] gi|222857764|gb|EEE95311.1| predicted protein [Populus trichocarpa]

 Score =  337 bits (865), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 163/219 (74%), Positives = 185/219 (84%), Gaps = 2/219 (0%)

Query: 5   TFIFTLVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLS 64
           TF+ T+ +  S F LS +  LAEP SG +QPLKPG+Y++ NTVPA P QT++  C LDLS
Sbjct: 3   TFL-TIFLSTSLFALSLSSFLAEPVSGQNQPLKPGDYSNPNTVPAIPVQTESQICHLDLS 61

Query: 65  AELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQPMMPDDSQKC 124
           AELFGGVN+ACGRDLDRSRCCPVLAAWLFAAH+R ALQV A+AP   PD PMMPDDSQKC
Sbjct: 62  AELFGGVNDACGRDLDRSRCCPVLAAWLFAAHARSALQVHASAPTPSPDFPMMPDDSQKC 121

Query: 125 VNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAV 184
           VNSLQSAL+SKNVK+PQPNASCDAILCFCGIRLH ISSLSCPAAFNV++GF N TPTAAV
Sbjct: 122 VNSLQSALLSKNVKLPQPNASCDAILCFCGIRLHHISSLSCPAAFNVSSGFHNATPTAAV 181

Query: 185 KNLEKNCRNSSYSGCTKCLGALQMVAKRREQERNSRTRR 223
            NLEKNC+NSSY+GCTKCLGALQ  AK   Q+R++R  R
Sbjct: 182 TNLEKNCKNSSYAGCTKCLGALQK-AKNGTQDRSTRDER 219

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224146708|ref|XP_002326107.1| predicted protein [Populus trichocarpa] gi|118488098|gb|ABK95869.1| unknown [Populus trichocarpa] gi|222862982|gb|EEF00489.1| predicted protein [Populus trichocarpa]

 Score =  337 bits (865), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 159/218 (72%), Positives = 184/218 (84%), Gaps = 1/218 (0%)

Query: 7   IFTLVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAE 66
           + T+ +  S F  S +  L+EP SG +QPLKPG+Y++ NTVPAFP QT++  C LDLSAE
Sbjct: 4   LLTIFLFTSLFTHSLSSFLSEPVSGQNQPLKPGDYSNPNTVPAFPVQTESQICHLDLSAE 63

Query: 67  LFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQPMMPDDSQKCVN 126
           LFGGVN+ACGRDLDRSRCCPVLAAWLFAAH+R ALQV A AP + PD PMMPDDSQKCVN
Sbjct: 64  LFGGVNDACGRDLDRSRCCPVLAAWLFAAHARSALQVQAPAPTSAPDLPMMPDDSQKCVN 123

Query: 127 SLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKN 186
           SLQSAL+SKNVK+ QPNASCDAILCFCGIRLHQISSLSCPAAFNV++ F N TPTAAVKN
Sbjct: 124 SLQSALLSKNVKLAQPNASCDAILCFCGIRLHQISSLSCPAAFNVSSAFHNATPTAAVKN 183

Query: 187 LEKNCRNSSYSGCTKCLGALQ-MVAKRREQERNSRTRR 223
           LEKNC+NS+YSGCTKCLGALQ + AK   Q++++R  R
Sbjct: 184 LEKNCKNSTYSGCTKCLGALQKLKAKNETQDKSTRDER 221

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225447687|ref|XP_002276552.1| PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Vitis vinifera]

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 159/228 (69%), Positives = 184/228 (80%), Gaps = 5/228 (2%)

Query: 10  LVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAELFG 69
           LV ++  F  S AGLLAEPA  H QP+KPG+Y++ NTVPAFP QT+  TCRLDLSAELFG
Sbjct: 13  LVFVLCLFEPSLAGLLAEPADSHQQPMKPGDYSTPNTVPAFPVQTETQTCRLDLSAELFG 72

Query: 70  GVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQPMMPDDSQKCVNSLQ 129
           GVN+ACGR+LDRSRCCPVLAAWLFAAH+R ALQV A APA+  D PMMPDDSQKCVNSLQ
Sbjct: 73  GVNDACGRNLDRSRCCPVLAAWLFAAHARSALQVAAPAPASS-DLPMMPDDSQKCVNSLQ 131

Query: 130 SALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEK 189
           S+L S+N+ IPQPNA+CDAILCFCGIRLHQI+SLSCPAAFN+++ +RN TPTAAVKNLE+
Sbjct: 132 SSLQSRNIHIPQPNATCDAILCFCGIRLHQITSLSCPAAFNISS-YRNATPTAAVKNLER 190

Query: 190 NCRNSSYSGCTKCLGALQMV---AKRREQERNSRTRRQQGKQDVQQGL 234
           NCRNSSYSGCTKCLGALQ +    K   +E   R  +   +     GL
Sbjct: 191 NCRNSSYSGCTKCLGALQKLKGDGKNGTEEGGDRASKMFSRDCQLMGL 238

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449438052|ref|XP_004136804.1| PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Cucumis sativus]

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 159/238 (66%), Positives = 183/238 (76%), Gaps = 6/238 (2%)

Query: 1   MPPFTFIFTLVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCR 60
           +P   FIF  + + +  H S AG L EP SG  QPL PG+Y+S NTVPAFP QTQ   C 
Sbjct: 8   VPLICFIF--LCIATNLHSSSAGFLIEPVSGQSQPLNPGQYSSPNTVPAFPVQTQMQICH 65

Query: 61  LDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQPMMPDD 120
           LDLS ELFGGV EACGRDLDRSRCCPVLAAWLFAAH+R AL++ A APA+  D PMMPDD
Sbjct: 66  LDLSDELFGGVREACGRDLDRSRCCPVLAAWLFAAHARAALKIAAPAPASAADLPMMPDD 125

Query: 121 SQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAG----FR 176
           SQKCVNSLQ++L+S+N++IPQPNASCDA+LCFCGIRLHQISSLSCPAAFNV+ G    +R
Sbjct: 126 SQKCVNSLQTSLLSRNIRIPQPNASCDAVLCFCGIRLHQISSLSCPAAFNVSGGGNGAYR 185

Query: 177 NVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMVAKRREQERNSRTRRQQGKQDVQQGL 234
           N TPTAAV+NLEKNCRNSSYSGCTKCLGALQ V   ++   N R  +   +     GL
Sbjct: 186 NATPTAAVRNLEKNCRNSSYSGCTKCLGALQKVTGTKKNSSNDRASKMFNRDCQLMGL 243

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544892|ref|XP_003540881.1| PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Glycine max]

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 150/228 (65%), Positives = 178/228 (78%), Gaps = 7/228 (3%)

Query: 4   FTFIFTLVILVSAFHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDL 63
            TF  +L+ L+     S AGLL+EP S  +QPL+PG    +NTVPAFP QTQA TCRLDL
Sbjct: 15  LTFFTSLLFLLP---FSRAGLLSEPVSDPNQPLEPG----SNTVPAFPVQTQALTCRLDL 67

Query: 64  SAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQPMMPDDSQK 123
           S ELFGGV +ACG+DLDRSRCCPVLAAWLFAAH+R AL V AA P +  D PMMPDDSQK
Sbjct: 68  SDELFGGVKDACGKDLDRSRCCPVLAAWLFAAHARTALDVSAAPPPSSADLPMMPDDSQK 127

Query: 124 CVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAA 183
           CVNSLQ +L+S+N++IPQPNA+CDAILCFCGIRLHQI+SL+C AAFNV+   RN TPTAA
Sbjct: 128 CVNSLQDSLLSRNIRIPQPNATCDAILCFCGIRLHQITSLTCNAAFNVSLSHRNATPTAA 187

Query: 184 VKNLEKNCRNSSYSGCTKCLGALQMVAKRREQERNSRTRRQQGKQDVQ 231
           V+NLE NCRNSSY+GCTKCLGALQ V   + + + S   ++   +D Q
Sbjct: 188 VRNLENNCRNSSYAGCTKCLGALQKVKGYKNETKGSDRVKKMFNRDCQ 235

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515216|ref|XP_003526297.1| PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Glycine max]

 Score =  299 bits (766), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 145/213 (68%), Positives = 170/213 (79%), Gaps = 4/213 (1%)

Query: 19  LSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACGRD 78
            S AGLL+EP S  +QPL+PG    +NTVPAFP QTQA TCRLDLS ELFGGV +ACG+D
Sbjct: 28  FSRAGLLSEPVSDPNQPLEPG----SNTVPAFPVQTQALTCRLDLSDELFGGVKDACGKD 83

Query: 79  LDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAEPDQPMMPDDSQKCVNSLQSALVSKNVK 138
           LDRSRCCPVLAAWLFAAH+R AL V AA P +  D PMMPDDSQKCVNSLQ +L+S+N++
Sbjct: 84  LDRSRCCPVLAAWLFAAHARTALDVSAAPPPSSGDLPMMPDDSQKCVNSLQDSLLSRNIR 143

Query: 139 IPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSG 198
           IPQ NA+CDAILCFCGIRLHQI+SL+C AAFNV+   RN TPTAAV+NLE NCRNSSY+G
Sbjct: 144 IPQSNATCDAILCFCGIRLHQITSLTCNAAFNVSLSHRNATPTAAVRNLENNCRNSSYAG 203

Query: 199 CTKCLGALQMVAKRREQERNSRTRRQQGKQDVQ 231
           CTKCLGALQ V   + + + S   ++   +D Q
Sbjct: 204 CTKCLGALQKVKGYKNETKGSDRVKKMFNRDCQ 236

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21593735|gb|AAM65702.1| unknown [Arabidopsis thaliana]

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 146/209 (69%), Positives = 166/209 (79%), Gaps = 16/209 (7%)

Query: 17  FHLSFAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACG 76
           F    + LL EP     QP         NTVPAFP +TQA +CRLDLS ELFGGVNEACG
Sbjct: 17  FSTVLSNLLVEPV----QP---------NTVPAFPVETQAQSCRLDLSNELFGGVNEACG 63

Query: 77  RDLDRSRCCPVLAAWLFAAHSRYALQVPAAAPAAE---PDQPMMPDDSQKCVNSLQSALV 133
           R+LDRSRCCPVLAAWLFAAH+R ALQ+PA AP  E   PD+PM PDDSQKCVN+LQSAL+
Sbjct: 64  RNLDRSRCCPVLAAWLFAAHARSALQLPAPAPTPESSDPDEPMKPDDSQKCVNTLQSALL 123

Query: 134 SKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRN 193
           +K +KIPQPN+SCDAILCFCGIRLHQISSLSCPAAFNV++GF+N TPTAAVKNLEK CRN
Sbjct: 124 TKQIKIPQPNSSCDAILCFCGIRLHQISSLSCPAAFNVSSGFKNATPTAAVKNLEKECRN 183

Query: 194 SSYSGCTKCLGALQMVAKRREQERNSRTR 222
           SSYSGCT+CLGALQ +  R   ++ +  R
Sbjct: 184 SSYSGCTRCLGALQKLKVRGGNKKTTTER 212

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18417127|ref|NP_567797.1| uncharacterized protein [Arabidopsis thaliana] gi|75208205|sp|Q9SUC9.1|UGPI7_ARATH RecName: Full=Uncharacterized GPI-anchored protein At4g28100; Flags: Precursor gi|4455369|emb|CAB36779.1| hypothetical protein [Arabidopsis thaliana] gi|7269664|emb|CAB79612.1| hypothetical protein [Arabidopsis thaliana] gi|51968690|dbj|BAD43037.1| predicted GPI-anchored protein [Arabidopsis thaliana] gi|51969584|dbj|BAD43484.1| predicted GPI-anchored protein [Arabidopsis thaliana] gi|332660041|gb|AEE85441.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  293 bits (751), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 139/181 (76%), Positives = 158/181 (87%), Gaps = 3/181 (1%)

Query: 45  NTVPAFPAQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRYALQVP 104
           NTVPAFP +TQA +CRLDLS ELFGGVNEACGR+LDRSRCCPVLAAWLFAAH+R ALQ+P
Sbjct: 32  NTVPAFPVETQAQSCRLDLSNELFGGVNEACGRNLDRSRCCPVLAAWLFAAHARSALQLP 91

Query: 105 AAAPAAE---PDQPMMPDDSQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQIS 161
           A AP  E   PD+PM PDDSQKCVN+LQSAL++K +KIPQPN+SCDAILCFCGIRLHQIS
Sbjct: 92  APAPTPESSDPDEPMKPDDSQKCVNTLQSALLTKQIKIPQPNSSCDAILCFCGIRLHQIS 151

Query: 162 SLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQMVAKRREQERNSRT 221
           SLSCPAAFNV++GF+N TPTAAVKNLEK CRNSSYSGCT+CLGALQ +  R   ++ +  
Sbjct: 152 SLSCPAAFNVSSGFKNATPTAAVKNLEKECRNSSYSGCTRCLGALQKLKVRGGNKKTTTE 211

Query: 222 R 222
           R
Sbjct: 212 R 212

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297799164|ref|XP_002867466.1| hypothetical protein ARALYDRAFT_491965 [Arabidopsis lyrata subsp. lyrata] gi|297313302|gb|EFH43725.1| hypothetical protein ARALYDRAFT_491965 [Arabidopsis lyrata subsp. lyrata]

 Score =  293 bits (750), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 146/205 (71%), Positives = 165/205 (80%), Gaps = 16/205 (7%)

Query: 21  FAGLLAEPASGHDQPLKPGEYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACGRDLD 80
            + LLAEP     QP         NTVPAFP +TQA +CRLDLS ELFGGVNEACGR+LD
Sbjct: 21  LSNLLAEPV----QP---------NTVPAFPVETQAQSCRLDLSNELFGGVNEACGRNLD 67

Query: 81  RSRCCPVLAAWLFAAHSRYALQVPAAAPAAE---PDQPMMPDDSQKCVNSLQSALVSKNV 137
           RSRCCPVLAAWLFAAH+R ALQ+PA AP  E   PD+PM PDDSQKCVN+LQSAL+ K +
Sbjct: 68  RSRCCPVLAAWLFAAHARSALQLPAPAPTPESSDPDEPMKPDDSQKCVNTLQSALLIKQI 127

Query: 138 KIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYS 197
           KIPQPN+SCDAILCFCGIRLHQISSLSCPAAFNV++GF+N TPTAAVKNLEK CRNSSYS
Sbjct: 128 KIPQPNSSCDAILCFCGIRLHQISSLSCPAAFNVSSGFKNATPTAAVKNLEKECRNSSYS 187

Query: 198 GCTKCLGALQMVAKRREQERNSRTR 222
           GCT+CLGALQ +  R   ++ +  R
Sbjct: 188 GCTRCLGALQKLNVRGGNKKTTTER 212

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	275
TAIR|locus:2132942	304	AT4G28100 "AT4G28100" [Arabido	0.610	0.552	0.736	1.4e-64
TAIR|locus:2092732	335	AT3G18050 "AT3G18050" [Arabido	0.661	0.543	0.328	5.3e-24

TAIR|locus:2132942 AT4G28100 "AT4G28100" [Arabidopsis thaliana (taxid:3702)]

 Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
 Identities = 126/171 (73%), Positives = 140/171 (81%)

Query:    40 EYASTNTVPAFPAQTQAATCRLDLSAELFGGVNEACGRDLDRSRCCPVLAAWLFAAHSRY 99
             E    NTVPAFP +TQA +CRLDLS ELFGGVNEACGR+LDRSRCCPVLAAWLFAAH+R 
Sbjct:    27 EPVQPNTVPAFPVETQAQSCRLDLSNELFGGVNEACGRNLDRSRCCPVLAAWLFAAHARS 86

Query:   100 ALQVXXXXXXXXXXXXXXXXX---SQKCVNSLQSALVSKNVKIPQPNASCDAILCFCGIR 156
             ALQ+                    SQKCVN+LQSAL++K +KIPQPN+SCDAILCFCGIR
Sbjct:    87 ALQLPAPAPTPESSDPDEPMKPDDSQKCVNTLQSALLTKQIKIPQPNSSCDAILCFCGIR 146

Query:   157 LHQISSLSCPAAFNVTAGFRNVTPTAAVKNLEKNCRNSSYSGCTKCLGALQ 207
             LHQISSLSCPAAFNV++GF+N TPTAAVKNLEK CRNSSYSGCT+CLGALQ
Sbjct:   147 LHQISSLSCPAAFNVSSGFKNATPTAAVKNLEKECRNSSYSGCTRCLGALQ 197

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0046658 "anchored to plasma membrane" evidence=IDA

TAIR|locus:2092732 AT3G18050 "AT3G18050" [Arabidopsis thaliana (taxid:3702)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 69/210 (32%), Positives = 100/210 (47%)

Query:    21 FAGLLAEPASGHDQPLKPGEYASTN--TVPAFPAQTQAATCRLDLSAELFGGVNEAC-GR 77
             F   +  P S     ++P    S+   T+PAFP Q+  + C LDL  +LF G+  AC G+
Sbjct:    15 FLFTILSPVSPEPVTVQPFRVKSSPPATIPAFPEQSDFSGCPLDLPEDLFHGIKSACSGK 74

Query:    78 DLDRSRCCPVLAAWLFAAHSRYALQVXXXXXXXXXXXXXXXXX------------SQKCV 125
              L + +CCPVL AWL++A+S  AL                               S+ CV
Sbjct:    75 KLHKGKCCPVLGAWLYSAYSTTALSRSISAAARNSSSSSAAVTTPEEDMPLLPDDSETCV 134

Query:   126 NSLQSALVSKNVKIPQPNASCDAILCFCGIRLHQISSLSCPAAFNVTAGFRNVTPTAAVK 185
             + L  +L  + +++ +PN +CD + C+CGIRLH    LSC  AF V    R V     V 
Sbjct:   135 DGLGKSLRQRGIELTRPNETCDVVYCYCGIRLHP---LSCSEAFRVNDEGRLVGDER-VD 190

Query:   186 NLEKNCRNSSYS---------GCTKCLGAL 206
              LE +C + S++         GC KCL +L
Sbjct:   191 RLETDCLSGSHNNADGFSPLLGCNKCLNSL 220


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.132   0.409    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      275       244   0.00098  113 3  11 22  0.40    33
                                                     32  0.45    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  183 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.22u 0.19s 17.41t   Elapsed:  00:00:01
  Total cpu time:  17.22u 0.19s 17.41t   Elapsed:  00:00:01
  Start:  Sat May 11 03:55:38 2013   End:  Sat May 11 03:55:39 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031225 "anchored to membrane" evidence=TAS

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SUC9	UGPI7_ARATH	No assigned EC number	0.7679	0.6472	0.5855	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_XIII0028 hypothetical protein (293 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00