Citrus Sinensis ID: 023980

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270----
Protein Sequence
MSGSQWNEVALNGEDLSYMLDDETTPVKACGDLAYHATHNGNMSKEPKDCRETYSQIKRRRMLQFDTQVVDSSLCSDEMPSPFLKSNERGESVEEVLPEASQWTTEFSGVSASSCDGTDQSLEGWISECLNDPEMNFSTDELDFSGASDIQIDISEFSNSPPAYDDANILQQHCTKTPHNVVFRGRKSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRIHSPASTLRQNTEDPSAYPKSAFSGKPVVGKTKIRTEGGKGSITIMRTKG
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccEEEEEEEEccccccccccHHHHHHHHcccccccccccccccccccccccccccEEEEEEEEccccEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHcccccHHHHHHccccccccHccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccHHHHccccccHcccccccccccccccccccHHHHHHHccccccccccHHcccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccEEEEEEEEccccccccccHHHHHHHHHccccccccccccccccccccccccEEEEEEEEEccccccEEEEEEccc
Coil and Loop (DISEMBL)
msgsqwnevalngedlsymlddettpvkacgdlayhathngnmskepkdcRETYSQIKRRRMLQFDTqvvdsslcsdempspflksnergesveevlpeasqwttefsgvsasscdgtdqslEGWIseclndpemnfstdeldfsgasdiqidisefsnsppayddanilqqhctktphnvvfrgrkslirtptklassvaypfafikpcgvhgditlkdinqrihspastlrqntedpsaypksafsgkpvvgktkirteggkgsITIMRTKG
Flexible Loop (DISEMBL)
MSGSQWNEVALNGEDLSYMLDDETTPVKACGDLAYHAthngnmskepkdCRETYSQIKRRRMLQFDTQVVDSSLCSDEMPSPFLKSNERGESVEEVLPEASQWTTEFSGVSASSCDGTDQSLEGWISECLNDPEMNFSTDELDFSGASDIQIDISEFSNSPPAYDDANILQQHCTKTPHNVVFRGRKSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRIHSpastlrqntedpsaypksafsgkpvvgktkirteggkgsitimrtkg
Low Complexity Region (SEG)
MSGSQWNEVALNGEDLSYMLDDETTPVKACGDLAYHATHNGNMSKEPKDCRETYSQIKRRRMLQFDTQVVDSSLCSDEMPSPFLKSNERGESVEEVLPEASQWTTEFSGVSASSCDGTDQSLEGWISECLNDPEMNFSTDELDFSGASDIQIDISEFSNSPPAYDDANILQQHCTKTPHNVVFRGRKSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRIHSPASTLRQNTEDPSAYPKSAFSGKPVVGKTKIRTEGGKGSITIMRTKG
Disordered region (IsUnstruct)
**************DLSYMLDDETTPVKACGDLAYHA************************************************************************************LEGWISECLN******************IQIDI*********YDDANILQQHCTKTPHNVVFRGRKSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQ***************************************************
Disordered Region (DISOPRED)
*SGSQWNEVALNGEDLSYMLDDETTPVKACGDLAYHATHNG********************MLQFD********************NERGESVEEVLPEASQWTTEFSGVSAS****TDQSLEGWISECLN********************************************************************VAYPFAFIKPCGVHGDITLKDINQR************************GKPVVGKTKIRTEGGKGSITIMRTK*
Disordered Region (DISEMBL)
********VALNGEDLSYMLDDETTPVKACGDLAYHATHNGNMSKEPKDCRETYSQIKRRRMLQFDTQVVDSSLCSDEMPSPFLKSNERGESVEEVLPEASQW**************TDQSLEGWISECLNDPEMNFSTDELDFSGASDIQIDISEFSNSPPAYDDANILQQHCTKTPHNVVFRGRKSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRIHSPAS**************SAFSGKPVVGKTKIRTEGGKGSITIMRTKG
Disordered Region (DISPRO)
*SGSQWNEVALNGEDLSYMLDDETTPVKACGDLAYHATHNGNMSK*****************LQFD************************ESVEEVLPEASQWTTEFSGVSASSCDGTDQSLEGWISECLNDPEMNFSTDELDFS*************************************************KLASSVAYPFAFIKPCGVHGDITLKDINQRIHSPAS****************FSGKPVVGKTKIRTEGGKGSITIMRTKG
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSGSQWNEVALNGEDLSYMLDDETTPVKACGDLAYHATHNGNMSKEPKDCRETYSQIKRRRMLQFDTQVVDSSLCSDEMPSPFLKSNERGESVEEVLPEASQWTTEFSGVSASSCDGTDQSLEGWISECLNDPEMNFSTDELDFSGASDIQIDISEFSNSPPAYDDANILQQHCTKTPHNVVFRGRKSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRIHSPASTLRQNTEDPSAYPKSAFSGKPVVGKTKIRTEGGKGSITIMRTKG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	274	2.2.26 [Sep-21-2011]
Q6NLW5	300	Protein XRI1 OS=Arabidops	no	no	0.959	0.876	0.537	1e-70

>sp|Q6NLW5|XRI1_ARATH Protein XRI1 OS=Arabidopsis thaliana GN=XRI1 PE=1 SV=2

 Score =  266 bits (679), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 144/268 (53%), Positives = 186/268 (69%), Gaps = 5/268 (1%)

Query: 8   EVALNGEDLSYMLDDETTPVKACGDLAYHATHNGNMSKEPKDCRETYSQIKRRRMLQFDT 67
           EV LN ED SYM DDE TPVKAC +L YH T   + +++ +   ET S +KRRRMLQF+ 
Sbjct: 37  EVTLNQEDHSYMFDDENTPVKACSELGYHVT-TEDTNRKMEVHSETRSALKRRRMLQFED 95

Query: 68  QVVDSSLCSDEMPSPFLKSNERGESVEEVLPEASQWTTEFS-GVSASSCDGTDQSLEGWI 126
           Q  ++SL S E  S  LKS+ R ++ +E+LPE SQ    FS   SASS +G D   E W 
Sbjct: 96  QP-ETSLFSSESFSAILKSSARDDTFDELLPEGSQLIEGFSEDASASSFEGLDLYAEEWY 154

Query: 127 SECLNDPEMNFSTDELDFSGASDIQIDISEFSNSPPAYDDANILQQHCTKTPHNVVFRGR 186
           ++CLND E     D+L+F G+ D+Q+DISE+ N PP  +   + Q+  T++  NV+F+GR
Sbjct: 155 ADCLNDAETPMLPDDLNF-GSPDVQVDISEYLNVPPETETREV-QRPVTRSSPNVIFKGR 212

Query: 187 KSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRIHSPASTLRQNTEDPSAYPKSA 246
           KS  R  +KL SS+ YPFAFIKPCGVHG +TLKDINQ+I +P +  + + E+P+    SA
Sbjct: 213 KSFSRPVSKLPSSIIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAHIEEPAVIQTSA 272

Query: 247 FSGKPVVGKTKIRTEGGKGSITIMRTKG 274
           FSGKPVVGKTKIRTEGGKGSITIMRT+G
Sbjct: 273 FSGKPVVGKTKIRTEGGKGSITIMRTRG 300

Required for mitotic division of the generative cell nucleus and the development of mature tricellular pollen grains, and for male and female meiosis.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	274
255560125	293	conserved hypothetical protein [Ricinus	0.974	0.911	0.659	1e-100
224069822	280	predicted protein [Populus trichocarpa]	0.989	0.967	0.631	5e-94
356559041	309	PREDICTED: protein XRI1-like [Glycine ma	0.996	0.883	0.578	3e-84
449453276	304	PREDICTED: protein XRI1-like [Cucumis sa	0.989	0.891	0.585	3e-82
356506666	327	PREDICTED: LOW QUALITY PROTEIN: protein	0.948	0.795	0.571	3e-78
356527366	302	PREDICTED: protein XRI1-like [Glycine ma	0.967	0.877	0.551	3e-77
363808040	298	uncharacterized protein LOC100791247 [Gl	0.963	0.885	0.579	3e-77
147771043	320	hypothetical protein VITISV_010925 [Viti	0.875	0.75	0.549	4e-76
297792063	266	hypothetical protein ARALYDRAFT_494937 [	0.967	0.996	0.548	8e-71
79532088	266	protein XRI1 [Arabidopsis thaliana] gi|4	0.959	0.988	0.537	3e-69

>gi|255560125|ref|XP_002521080.1| conserved hypothetical protein [Ricinus communis] gi|223539649|gb|EEF41231.1| conserved hypothetical protein [Ricinus communis]

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/282 (65%), Positives = 219/282 (77%), Gaps = 15/282 (5%)

Query: 6   WNEVALNGEDLSYMLDDETTPVKACGDLAYHATHNGNMSKEPKDCRETYSQIKRRRMLQF 65
           WNEV LN EDLSYMLD ETTPVKACGDLAYH  H+ NM KEP++ RET SQ+KRRRMLQF
Sbjct: 14  WNEVTLNEEDLSYMLD-ETTPVKACGDLAYHVNHSDNMHKEPEEHRETSSQLKRRRMLQF 72

Query: 66  DTQVVDSSLCSDEMPSPFLKSN-----------ERGESVEEVLPEASQWTTEFSG-VSAS 113
           DTQ  DS LC +E+ S FL+SN           ER +S+EEVLP+AS W   FS  VSAS
Sbjct: 73  DTQAADSPLCHEEISSVFLQSNATVNVFVTYVQEREDSLEEVLPQASDWVPGFSADVSAS 132

Query: 114 SCDGTDQSLEGWISECLNDPEMNFSTDELDFSGASDIQIDISEFSNSPPAYDDANILQQH 173
           S +  D S EGW+++C ND EM  S ++++F GA D+QIDISEF N P   ++A+ +Q+ 
Sbjct: 133 SYEALDHSSEGWLADCFNDTEMGLSPNDMNFPGACDVQIDISEFCNGPLG-NEAHAVQKR 191

Query: 174 CTKTPHNVVFRGRKSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRIHS-PASTL 232
            T+TP NV+F+G+KS IRTPTKLASSV YPFAFIKPCG HGD+TLKDINQ+I + P S L
Sbjct: 192 ITRTPRNVIFKGKKSFIRTPTKLASSVVYPFAFIKPCGFHGDVTLKDINQKIRTPPPSKL 251

Query: 233 RQNTEDPSAYPKSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 274
           +QN EDP+AYP SAFSGKPVVGKTKIRTEGGKGSITIMRTKG
Sbjct: 252 KQNEEDPAAYPTSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 293

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069822|ref|XP_002303048.1| predicted protein [Populus trichocarpa] gi|222844774|gb|EEE82321.1| predicted protein [Populus trichocarpa]

 Score =  350 bits (897), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 178/282 (63%), Positives = 215/282 (76%), Gaps = 11/282 (3%)

Query: 1   MSGSQWNEVALNGEDLSYMLDDETTPVKACGDLAYHATHNG-------NMSKEPKDCRET 53
           +S   WNEV LNGEDLSYMLD ETTPVKAC DLAYH  H+G       NM+KEP++ RET
Sbjct: 2   VSQRLWNEVTLNGEDLSYMLD-ETTPVKACADLAYHVNHDGMVLWMSDNMNKEPEERRET 60

Query: 54  YSQIKRRRMLQFDTQVVDSSLCSDEMPSPFLKSNERGESVEEVLPEASQWTTEFSGVSAS 113
             Q KRRR LQFDT + DS  C +++ S FLKSNE  ES+EEV P+ASQW + +  +SAS
Sbjct: 61  CFQFKRRR-LQFDTHLADSPFCDEDLTSVFLKSNETEESLEEVFPQASQWDSGYQDMSAS 119

Query: 114 SCDGTDQSLEGWISECLNDPEMNFSTDELDFSGASDIQIDISEFSNSPPAYDDANILQQH 173
             +G D S + WI++C ND  M+FS ++++F GASDIQIDIS+F N PP + +A+ +Q+ 
Sbjct: 120 CYNGLDPSSDPWIADCFNDSGMHFSPNDMNFPGASDIQIDISDFCNDPPEF-EASTVQKC 178

Query: 174 CTKTPHNVVFRGRKSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRIHS-PASTL 232
             +TP NVVF+G KS I+TPTKLA+SVAYPFAFIKPCGVHGD+TL +INQRI + P S  
Sbjct: 179 VPRTPRNVVFKGTKSFIQTPTKLATSVAYPFAFIKPCGVHGDVTLNEINQRIRTPPPSKS 238

Query: 233 RQNTEDPSAYPKSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 274
           +Q  EDP  YP SAFSGKPVVGKTKIRTEGGKGSITIMRTKG
Sbjct: 239 KQKDEDPVVYPMSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 280

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559041|ref|XP_003547810.1| PREDICTED: protein XRI1-like [Glycine max]

 Score =  317 bits (813), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 162/280 (57%), Positives = 203/280 (72%), Gaps = 7/280 (2%)

Query: 1   MSGSQWNEVALNGEDLSYMLDDETTPVKACGDLAYHATHNGNMSKEPKDCRETYSQIKRR 60
           +S   WN+V  N EDLSYMLDDETTPVKACGDLAY+  +  NM KE ++CRETYSQ KRR
Sbjct: 31  ISEELWNDVPQNEEDLSYMLDDETTPVKACGDLAYNVNNADNMQKELEECRETYSQAKRR 90

Query: 61  RMLQFDTQVVDSSLCSDEMPSPFLKSNERGESVEEVLPEASQWTT---EFSGVSASSCDG 117
           RMLQF++Q  D SL ++ M   +LK N + + V+E+ PE SQW +   +F+  +AS+ D 
Sbjct: 91  RMLQFNSQESDQSLSNEGMSLSYLK-NGKEDPVKEIFPEVSQWVSGASDFTLGNASASDY 149

Query: 118 TD-QSLEGWISECLNDPEMNFSTDELDFSGASDIQIDISEFSNSPPAYDDANILQQHCTK 176
            D +S E W+++  ND EM+ S +EL FS A D+QID +E S   P+ +   + Q H  +
Sbjct: 150 VDLESTETWLADYFNDAEMDISPEELKFSVADDVQIDGTEVSAIKPSREQNVVQQTHIPR 209

Query: 177 TPHNVVFRGRKSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRIHS--PASTLRQ 234
           T  N++F+GRKS I  PTKLASSVAYPFAFIKP G HGD+TLK+INQ I +  P  + + 
Sbjct: 210 TTRNIIFKGRKSFIHMPTKLASSVAYPFAFIKPSGAHGDVTLKEINQHIQTPPPLKSKQS 269

Query: 235 NTEDPSAYPKSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 274
           N +DPSAYPKSAFSGKPVVGKTKIRTEGGKGSITI RTKG
Sbjct: 270 NDDDPSAYPKSAFSGKPVVGKTKIRTEGGKGSITITRTKG 309

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453276|ref|XP_004144384.1| PREDICTED: protein XRI1-like [Cucumis sativus] gi|449529551|ref|XP_004171763.1| PREDICTED: protein XRI1-like [Cucumis sativus]

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 164/280 (58%), Positives = 209/280 (74%), Gaps = 9/280 (3%)

Query: 1   MSGSQWNEVALNGEDLSYMLDDETTPVKACGDLAYHATHNGNMSKEPKDCRETYSQIKRR 60
           +S   W+ V+ NG DLSY+ D ETTPVKACGDLAYH T + + +K+ ++ RET+SQ KRR
Sbjct: 28  ISECLWDGVSENG-DLSYVFD-ETTPVKACGDLAYHVTCSDDRNKKSEESRETHSQAKRR 85

Query: 61  RMLQFDTQVVDSSLCSDEMPSPFLKSNERGESVEEVLPEASQWTTEFSGVSAS---SC-D 116
           RMLQF  Q +++S+C +++ S FLKS+ +  S    L E S    E SG++ +   SC +
Sbjct: 86  RMLQFTAQDLETSICREDLSSRFLKSHNKVVSSPAALAEVSYGIPECSGLADNVLISCHE 145

Query: 117 GTDQSLEGWISECLNDPEMNFSTDELDFSGASDIQIDISEFSNSPPAYDDANILQQHCTK 176
             D S EGWI+ECLND +M+ S ++L F+G SDIQID+SEF +  P +  +N++Q H T+
Sbjct: 146 NLDHSPEGWIAECLNDADMHCSPEDLSFAGTSDIQIDVSEFCDGAPEFK-SNVVQHHPTR 204

Query: 177 TPHNVVFRGRKSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRIHS-PASTLRQN 235
            P N++F+GRKS IRTPTKLASSVAYPFAFIKPCG HGD+TLKDINQRI + P S L+  
Sbjct: 205 APPNIIFKGRKSYIRTPTKLASSVAYPFAFIKPCGFHGDVTLKDINQRIRTPPPSKLKHQ 264

Query: 236 TEDPS-AYPKSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 274
            EDPS +YP SAFSGKPVVGKTKI TEGGKGSITIMRT+G
Sbjct: 265 PEDPSESYPTSAFSGKPVVGKTKIHTEGGKGSITIMRTRG 304

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506666|ref|XP_003522097.1| PREDICTED: LOW QUALITY PROTEIN: protein XRI1-like [Glycine max]

 Score =  297 bits (761), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 159/278 (57%), Positives = 199/278 (71%), Gaps = 18/278 (6%)

Query: 1   MSGSQWNEVALNGEDLSYMLDDETTPVKACGDLAYHATHNGNMSKEPKDCRETYSQIKRR 60
           +S   WN+V  N EDLSYMLDDETTPVKACGDL            EP++CRETYSQ KRR
Sbjct: 64  ISEELWNDVPQNEEDLSYMLDDETTPVKACGDL------------EPEECRETYSQXKRR 111

Query: 61  RMLQFDTQVVDSSLCSDEMPSPFLKSNERGESVEEVLPEASQWTTEFSGVSASSCDGTD- 119
           RMLQF++Q  D SL ++EM   +LK N + + V+E+ PE SQW +  SG +AS+ D  D 
Sbjct: 112 RMLQFNSQDSDQSLSNEEMSLSYLK-NGKEDPVKEIFPEVSQWVSGASG-NASASDYVDL 169

Query: 120 QSLEGWISECLNDPEMNFSTDELDFSGASDIQIDI-SEFSNSPPAYDDANILQQHCTKTP 178
           +S E W+++  ND  M+FS +EL+FS A  +QID  +E S   P+++   + Q H  +T 
Sbjct: 170 ESTETWLADYFNDAVMDFSPEELNFSVADGVQIDDGTEVSAITPSHEQNVVQQTHVPRTT 229

Query: 179 HNVVFRGRKSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRIHSPASTLRQNT-- 236
            N++F+GRKS I  PTKLASSVAYPFAFIKP G HGD+TLK+INQRI +P+ +    +  
Sbjct: 230 CNIIFKGRKSFIHMPTKLASSVAYPFAFIKPSGAHGDVTLKEINQRIQTPSPSKSNQSID 289

Query: 237 EDPSAYPKSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 274
           +DPSAYPKSAFSGKPVVGKTKIRTEGGKGSITI RTKG
Sbjct: 290 DDPSAYPKSAFSGKPVVGKTKIRTEGGKGSITITRTKG 327

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356527366|ref|XP_003532282.1| PREDICTED: protein XRI1-like [Glycine max]

 Score =  294 bits (753), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 151/274 (55%), Positives = 197/274 (71%), Gaps = 9/274 (3%)

Query: 6   WNEVALNGEDLSYMLDDETTPVKACGDLAYHATHNGNM--SKEPKDCRETYSQIKRRRML 63
           WN V+ N EDLS++ +DETTPVKACGD AY+  ++ +    KE   C ++  QIKRRRML
Sbjct: 33  WNGVSQN-EDLSFVFNDETTPVKACGDFAYNVNNSESNNVQKESDKCLKSSYQIKRRRML 91

Query: 64  QFDTQVVDSSLCSDEMPSPFLKSNERGESVEEVLPEASQWTTEFSGVSASSCDGTDQSLE 123
           QF++Q     L +++M S +LK  E  E  E+V PE SQW +   G +++S     +S E
Sbjct: 92  QFNSQDGGHLLSNEQMSSAYLKGKE--EPKEDVFPEFSQWVSGTPGSASASNYEDLESAE 149

Query: 124 GWISECLNDPEMNFSTDELDFSGASDIQIDISEFSNSPPAYDDANILQQHCTKTPHNVVF 183
           GW+++C  D EM    D+L+FSGA ++Q+D+++  N PPA +  N++Q   T+TP N++F
Sbjct: 150 GWLADCFKDAEMQLCPDDLNFSGADEVQVDVADLGNFPPACEQ-NVVQHGFTQTPKNIIF 208

Query: 184 RGRKSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRIHSPASTLR---QNTEDPS 240
           +G KS I TPTKLA+SVAYPFAFIKPCG HGD+TLK+INQRI SP   L+   Q+ EDPS
Sbjct: 209 KGGKSFIETPTKLAASVAYPFAFIKPCGAHGDVTLKEINQRILSPPPPLKSQQQSMEDPS 268

Query: 241 AYPKSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 274
           AYPKSAFSGKPVVGKT+I  EGGKGSITIMRTKG
Sbjct: 269 AYPKSAFSGKPVVGKTRIHIEGGKGSITIMRTKG 302

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363808040|ref|NP_001242722.1| uncharacterized protein LOC100791247 [Glycine max] gi|255647285|gb|ACU24109.1| unknown [Glycine max]

 Score =  294 bits (752), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 157/271 (57%), Positives = 193/271 (71%), Gaps = 7/271 (2%)

Query: 6   WNEVALNGEDLSYMLDDETTPVKACGDLAYHATHNGNMSKEPKDCRETYSQIKRRRMLQF 65
           WN V  N EDLS + +DETTPVKACGD AY+  +N  + KE   C ++  QIKRRRMLQF
Sbjct: 33  WNGVPQN-EDLSNVFNDETTPVKACGDFAYN-VNNSELQKESDKCLKSSDQIKRRRMLQF 90

Query: 66  DTQVVDSSLCSDEMPSPFLKSNERGESVEEVLPEASQWTTEFSGVSASSCDGTDQSLEGW 125
           +TQ     L ++ M S +LK  E  ES E+V PE S W +  SG +++S     +S EGW
Sbjct: 91  NTQDGGHFLSNEHMSSAYLKGKE--ESNEDVFPELSHWVSGASGSASASNYEDLESAEGW 148

Query: 126 ISECLNDPEMNFSTDELDFSGASDIQIDISEFSNSPPAYDDANILQQHCTKTPHNVVFRG 185
           +++C  D EM    D+L+FSGA  +QID+++  N PPA +  N+LQ H T+TP N+VF+G
Sbjct: 149 LADCFKDAEMQLCPDDLNFSGADAVQIDVADLCNFPPACE-QNVLQHHVTQTPKNIVFKG 207

Query: 186 RKSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRIHSPASTLR--QNTEDPSAYP 243
            KS I TPTKLA+SVAYPF FIKPCG HGD+TLK+INQRI SP   L+  Q+ EDPSAYP
Sbjct: 208 GKSFIETPTKLAASVAYPFTFIKPCGAHGDVTLKEINQRILSPPPPLKSQQSMEDPSAYP 267

Query: 244 KSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 274
           KSAFSGKPVVGKTKI  EGGKGSITIM TKG
Sbjct: 268 KSAFSGKPVVGKTKIHIEGGKGSITIMGTKG 298

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147771043|emb|CAN65243.1| hypothetical protein VITISV_010925 [Vitis vinifera]

 Score =  290 bits (743), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 162/295 (54%), Positives = 192/295 (65%), Gaps = 55/295 (18%)

Query: 1   MSGSQWNEVALNGEDLSYMLDDETTPVKACGDLAYHATHNG------------------N 42
           +S   W+ V  N EDLSYM D ETTPVKACGDLAYH T  G                  N
Sbjct: 60  ISQCLWDGVTQNEEDLSYMFD-ETTPVKACGDLAYHVTDGGILALHCLPJLQLKEWIPGN 118

Query: 43  MSKEPKDCRETYSQIKRRRMLQFDTQVVDSSLCSDEMPSPFLKSNERGESVEEVLPEASQ 102
           M+KE  +C+ET SQ                               ER   VEE  P+ASQ
Sbjct: 119 MNKE-TECKETCSQ-------------------------------ERESFVEETQPDASQ 146

Query: 103 WTTEF-SGVSASSCDGTDQSLEGWISECLNDPEMNFSTDELDFSGASDIQIDISEFSNSP 161
           W + F   +S S  +G D+S EGW++EC ND EM+FS D+++ S  SD+QID++EF N P
Sbjct: 147 WVSGFPENMSVSGYEGLDKSSEGWLAECFNDAEMHFSPDDMNLSEISDVQIDVTEFYNIP 206

Query: 162 PAYDDANILQQHCTKTPHNVVFRGRKSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDI 221
             Y+ AN +Q+  T+TP NV+F+GRKS +RTPTKLASSVAYPFAFIKPCGVHGD+TLKDI
Sbjct: 207 TEYE-ANTVQERATRTPQNVIFKGRKSYMRTPTKLASSVAYPFAFIKPCGVHGDVTLKDI 265

Query: 222 NQRIHS-PASTLRQNTEDPS-AYPKSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 274
           NQRI + P S  RQ+ EDPS +YP SAFSGKPVVGKTKIRTEGGKGSITIMRTKG
Sbjct: 266 NQRIRTPPPSKSRQSNEDPSVSYPTSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 320

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297792063|ref|XP_002863916.1| hypothetical protein ARALYDRAFT_494937 [Arabidopsis lyrata subsp. lyrata] gi|297309751|gb|EFH40175.1| hypothetical protein ARALYDRAFT_494937 [Arabidopsis lyrata subsp. lyrata]

 Score =  273 bits (697), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 148/270 (54%), Positives = 186/270 (68%), Gaps = 5/270 (1%)

Query: 6   WNEVALNGEDLSYMLDDETTPVKACGDLAYHATHNGNMSKEPKDCRETYSQIKRRRMLQF 65
             EV LN ED SYM DDETTPVKAC +L YH T   + +++ +   ET S +KRRRMLQF
Sbjct: 1   MTEVTLNQEDHSYMFDDETTPVKACSELGYHVTTE-DTNRKMEVHSETRSALKRRRMLQF 59

Query: 66  DTQVVDSSLCSDEMPSPFLKSNERGESVEEVLPEASQWTTEFS-GVSASSCDGTDQSLEG 124
           + Q  ++SL S E  S  LKS+ R E+ +E+LPE SQ    FS   SASS +G D   E 
Sbjct: 60  EDQP-ETSLFSSESFSAILKSSARDETFDELLPEGSQLIEGFSEDASASSFEGLDLYAEE 118

Query: 125 WISECLNDPEMNFSTDELDFSGASDIQIDISEFSNSPPAYDDANILQQHCTKTPHNVVFR 184
           W +ECLND E     D+L F G+ D+Q+DISE+ N PP  +     Q+  T++  NV+F+
Sbjct: 119 WYAECLNDAETPMLPDDLSF-GSPDVQVDISEYLNVPPETETREA-QRPVTRSSPNVIFK 176

Query: 185 GRKSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRIHSPASTLRQNTEDPSAYPK 244
           GRKS  R  +KL SS+ YPFAFIKPCGVHG +TLKDINQ+I +P +  +Q+ E+P+    
Sbjct: 177 GRKSFSRPVSKLPSSIIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKQHIEEPAVIQT 236

Query: 245 SAFSGKPVVGKTKIRTEGGKGSITIMRTKG 274
           SAFSGKPVVGKTKIRTEGGKGSITIMRT+G
Sbjct: 237 SAFSGKPVVGKTKIRTEGGKGSITIMRTRG 266

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79532088|ref|NP_199683.2| protein XRI1 [Arabidopsis thaliana] gi|45773794|gb|AAS76701.1| At5g48720 [Arabidopsis thaliana] gi|58531328|gb|AAW78586.1| At5g48720 [Arabidopsis thaliana] gi|332008332|gb|AED95715.1| protein XRI1 [Arabidopsis thaliana]

 Score =  267 bits (683), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 144/268 (53%), Positives = 186/268 (69%), Gaps = 5/268 (1%)

Query: 8   EVALNGEDLSYMLDDETTPVKACGDLAYHATHNGNMSKEPKDCRETYSQIKRRRMLQFDT 67
           EV LN ED SYM DDE TPVKAC +L YH T   + +++ +   ET S +KRRRMLQF+ 
Sbjct: 3   EVTLNQEDHSYMFDDENTPVKACSELGYHVTTE-DTNRKMEVHSETRSALKRRRMLQFED 61

Query: 68  QVVDSSLCSDEMPSPFLKSNERGESVEEVLPEASQWTTEFS-GVSASSCDGTDQSLEGWI 126
           Q  ++SL S E  S  LKS+ R ++ +E+LPE SQ    FS   SASS +G D   E W 
Sbjct: 62  QP-ETSLFSSESFSAILKSSARDDTFDELLPEGSQLIEGFSEDASASSFEGLDLYAEEWY 120

Query: 127 SECLNDPEMNFSTDELDFSGASDIQIDISEFSNSPPAYDDANILQQHCTKTPHNVVFRGR 186
           ++CLND E     D+L+F G+ D+Q+DISE+ N PP  +   + Q+  T++  NV+F+GR
Sbjct: 121 ADCLNDAETPMLPDDLNF-GSPDVQVDISEYLNVPPETETREV-QRPVTRSSPNVIFKGR 178

Query: 187 KSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRIHSPASTLRQNTEDPSAYPKSA 246
           KS  R  +KL SS+ YPFAFIKPCGVHG +TLKDINQ+I +P +  + + E+P+    SA
Sbjct: 179 KSFSRPVSKLPSSIIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAHIEEPAVIQTSA 238

Query: 247 FSGKPVVGKTKIRTEGGKGSITIMRTKG 274
           FSGKPVVGKTKIRTEGGKGSITIMRT+G
Sbjct: 239 FSGKPVVGKTKIRTEGGKGSITIMRTRG 266

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	274
TAIR|locus:2156519	300	XRI1 "AT5G48720" [Arabidopsis	0.959	0.876	0.537	9.2e-68
TAIR|locus:2041110	213	AT2G01990 "AT2G01990" [Arabido	0.529	0.680	0.369	3.1e-13
TAIR|locus:2204538	226	AT1G14630 "AT1G14630" [Arabido	0.270	0.327	0.506	1.6e-08

TAIR|locus:2156519 XRI1 "AT5G48720" [Arabidopsis thaliana (taxid:3702)]

 Score = 688 (247.2 bits), Expect = 9.2e-68, P = 9.2e-68
 Identities = 144/268 (53%), Positives = 186/268 (69%)

Query:     8 EVALNGEDLSYMLDDETTPVKACGDLAYHATHNGNMSKEPKDCRETYSQIKRRRMLQFDT 67
             EV LN ED SYM DDE TPVKAC +L YH T   + +++ +   ET S +KRRRMLQF+ 
Sbjct:    37 EVTLNQEDHSYMFDDENTPVKACSELGYHVTTE-DTNRKMEVHSETRSALKRRRMLQFED 95

Query:    68 QVVDSSLCSDEMPSPFLKSNERGESVEEVLPEASQWTTEFS-GVSASSCDGTDQSLEGWI 126
             Q  ++SL S E  S  LKS+ R ++ +E+LPE SQ    FS   SASS +G D   E W 
Sbjct:    96 QP-ETSLFSSESFSAILKSSARDDTFDELLPEGSQLIEGFSEDASASSFEGLDLYAEEWY 154

Query:   127 SECLNDPEMNFSTDELDFSGASDIQIDISEFSNSPPAYDDANILQQHCTKTPHNVVFRGR 186
             ++CLND E     D+L+F G+ D+Q+DISE+ N PP  +   + Q+  T++  NV+F+GR
Sbjct:   155 ADCLNDAETPMLPDDLNF-GSPDVQVDISEYLNVPPETETREV-QRPVTRSSPNVIFKGR 212

Query:   187 KSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRIHSPASTLRQNTEDPSAYPKSA 246
             KS  R  +KL SS+ YPFAFIKPCGVHG +TLKDINQ+I +P +  + + E+P+    SA
Sbjct:   213 KSFSRPVSKLPSSIIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAHIEEPAVIQTSA 272

Query:   247 FSGKPVVGKTKIRTEGGKGSITIMRTKG 274
             FSGKPVVGKTKIRTEGGKGSITIMRT+G
Sbjct:   273 FSGKPVVGKTKIRTEGGKGSITIMRTRG 300

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006281 "DNA repair" evidence=IMP

GO:0007140 "male meiosis" evidence=IMP

GO:0007143 "female meiosis" evidence=IMP

GO:0009555 "pollen development" evidence=IMP

GO:0010165 "response to X-ray" evidence=IEP

GO:0006302 "double-strand break repair" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0009165 "nucleotide biosynthetic process" evidence=RCA

GO:0010332 "response to gamma radiation" evidence=RCA

GO:0043687 "post-translational protein modification" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2041110 AT2G01990 "AT2G01990" [Arabidopsis thaliana (taxid:3702)]

 Score = 174 (66.3 bits), Expect = 3.1e-13, P = 3.1e-13
 Identities = 64/173 (36%), Positives = 85/173 (49%)

Query:   119 DQSLEGW-ISE---CLND----PEMNFSTDELDFSGASDIQIDISEFSNSPP---AYDDA 167
             D S   W + E   CLN     P +N  T E   SG S  Q  IS    SP    +YD  
Sbjct:    52 DDSQNDWGLHESYSCLNSQFVTPHVN--TGER-ISGVSYCQETISNVYESPDTSVSYDKI 108

Query:   168 NILQQHCTKTPHNVVFRGRKSLIRTPTKLASSVAYPFAFIKPCGVHGDITLKDINQRI-H 226
              + ++  T+   +      K LI   TKL     YPF  +KP G   D+TL DIN+RI  
Sbjct:   109 YVREKSPTEPSSSNCGNKNKRLI---TKLV----YPFGLVKPGGRENDVTLNDINERILM 161

Query:   227 SPASTLRQNTEDPSAYP-----KSAFSGKPVVGKTKIRTEGGKGSITIMRTKG 274
             +P+  +R    D ++ P         SGK VV  TKI+T+G +G+ITI+RTKG
Sbjct:   162 APSRPIRHPVGDFASRPCVSGRGPGLSGKAVVALTKIQTQG-RGTITIIRTKG 213

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2204538 AT1G14630 "AT1G14630" [Arabidopsis thaliana (taxid:3702)]

 Score = 146 (56.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 41/81 (50%), Positives = 49/81 (60%)

Query:   200 VAYPFAFIKPCGVHGDITLKDINQRIHSP-ASTLRQNTEDPSAYP-KSA----FSGKPVV 253
             V YPF  +KP G   DITL DIN+RI  P A  +R    D +  P  SA     SGK VV
Sbjct:   147 VVYPFGVVKPGGREEDITLNDINKRILMPSARPVRHPVGDFACRPCVSADGPGLSGKAVV 206

Query:   254 GKTKIRTEGGKGSITIMRTKG 274
               TKI+T G +G+ITI+RTKG
Sbjct:   207 AFTKIQTLG-RGTITIIRTKG 226


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.129   0.380    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      274       274   0.00078  115 3  11 23  0.42    34
                                                     33  0.40    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  217 KB (2120 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.66u 0.18s 24.84t   Elapsed:  00:00:01
  Total cpu time:  24.66u 0.18s 24.84t   Elapsed:  00:00:01
  Start:  Sat May 11 05:30:02 2013   End:  Sat May 11 05:30:03 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00011760001 SubName- Full=Chromosome undetermined scaffold_336, whole genome shotgun sequence; (313 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00