Citrus Sinensis ID: 024013

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270----
Protein Sequence
MRTLVLRPQYHCHQPPSCFLTSSNSFIHSFKPHRRFHFVKPCSSLKQTKKQNTLQKSTTNAPRSLGWFFNPKGDDDDNNNRIQGNGMDAESEGLEGDTAVKGSILAGVLLLVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGRYDYYPSYYSI
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccHHHHHHcHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcHHHHHHHHHHcccccHHHHHHHHHcccccccccHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEcccccccccccccccccccEEEEEccccEEEEcccccHHHHHccccHHcccccccccHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccEEEEEEEEccccHHHHHHHHHcccccccccEEEEEEcccccEEEc
Coil and Loop (DISEMBL)
mrtlvlrpqyhchqppscfltssnsfihsfkphrrfhfvkpcsslkqtkkqntlqksttnaprslgwffnpkgddddnnnriqgngmdaeseglegdtavkGSILAGVLLLVVVGGFGTMGYVYKDQINAFLTQFSGfiegygpaGYALFVAVYAGLEilaipaipltmsagllfgsVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLrlspllpfslgnylygltsvkfvpyvlgrydyypsyysi
Flexible Loop (DISEMBL)
mrtlvlrpqyhchqppscfLTSSNSFIHSFKPHRRFHFVKPCsslkqtkkqntlqksttnaprslgwffnpkgddddnnNRIQGNGMDAESEGLEGDTAVKGSILAGVLLLVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGRYDYYPSYYSI
Low Complexity Region (SEG)
MRTLVLRPQYHCHQPPSCFLTSSNSFIHSFKPHRRFHFVKPCSslkqtkkqntlqksttnAPRSLGWFFNPKGDDDDNNNRIQGNGMDAESEGLEGDTAVKGSIlagvlllvvvggfgTMGYVYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTllrlspllpfslGNYLYGLTSVKFVPYVLGRYDYYPSYYSI
Disordered region (IsUnstruct)
****VLRPQYHCHQPPSCFLTSSNSFIHSFKPHRRFHFVKPC***********************GWFF*****************************AVKGSILAGVLLLVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGRYDYYPSYY**
Disordered Region (DISOPRED)
****************************SFKPHRR******************************************************************GSILAGVLLLVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGRYDYYPSYYSI
Disordered Region (DISEMBL)
MRTLVLRPQYHCHQPPSCFLTSSNSFIHSFKPHRRFHFVKPCSSLKQTKKQNTLQKSTTNAPRSLGWFFNPKGDDDDNNNRIQGNGMDAESEGLEGDTAVKGSILAGVLLLVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGRYDYYPSYYSI
Disordered Region (DISPRO)
*RTLVLRPQYHCHQPPSCFLTSSNSFIHSFKPHRRFHFVKPCSSLK**************************************************DTAVKGSILAGVLLLVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGRYDYYPSYYSI
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRTLVLRPQYHCHQPPSCFLTSSNSFIHSFKPHRRFHFVKPCSSLKQTKKQNTLQKSTTNAPRSLGWFFNPKGDDDDNNNRIQGNGMDAESEGLEGDTAVKGSILAGVLLLVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGRYDYYPSYYSI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	274	2.2.26 [Sep-21-2011]
Q55909	209	TVP38/TMEM64 family membr	N/A	no	0.481	0.631	0.416	5e-23
P76219	236	TVP38/TMEM64 family membr	N/A	no	0.478	0.555	0.374	7e-19
P67118	252	TVP38/TMEM64 family membr	yes	no	0.397	0.432	0.297	1e-06
P67117	252	TVP38/TMEM64 family membr	yes	no	0.397	0.432	0.297	1e-06
Q6BQJ1	383	Golgi apparatus membrane	yes	no	0.291	0.208	0.365	2e-06
A7EFY0	393	Golgi apparatus membrane	N/A	no	0.492	0.343	0.286	4e-06
P06568	213	TVP38/TMEM64 family membr	yes	no	0.525	0.676	0.258	6e-05
A1CIM4	419	Golgi apparatus membrane	N/A	no	0.543	0.355	0.210	7e-05
P76221	235	TVP38/TMEM64 family inner	N/A	no	0.419	0.489	0.328	7e-05
A1CW44	418	Golgi apparatus membrane	N/A	no	0.332	0.217	0.242	0.0001

>sp|Q55909|Y305_SYNY3 TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1

 Score =  108 bits (270), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/132 (41%), Positives = 83/132 (62%)

Query: 138 FIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFL 197
           +I+G G      F+ +Y    ++ +P   LT+ AG++FG + G+I V I  T+ A+ AFL
Sbjct: 11  WIDGLGTWAAIAFMLLYTVATVVFLPGSILTLGAGVVFGVILGSIYVFIGATLGATAAFL 70

Query: 198 IARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKF 257
           + RY AR  + K + GN+KF AID+A+G+ G ++V L RLSP+ PF+L NY YG+T+V  
Sbjct: 71  VGRYLARGWVAKKIAGNQKFKAIDEAVGKEGLKIVILTRLSPVFPFNLLNYAYGITNVSL 130

Query: 258 VPYVLGRYDYYP 269
             YV+G     P
Sbjct: 131 KDYVIGSLGMIP 142

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

>sp|P76219|YDJX_ECOLI TVP38/TMEM64 family membrane protein YdjX OS=Escherichia coli (strain K12) GN=ydjX PE=3 SV=2

 Score = 94.4 bits (233), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 79/131 (60%)

Query: 132 LTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVA 191
           L      I   G  GY+L++ ++    +L +P   L ++ G++FG + GT++  I+ T+A
Sbjct: 33  LPHLQTLIRQSGFFGYSLYILLFIIATLLLLPGSILVIAGGIVFGPLLGTLLSLIAATLA 92

Query: 192 ASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYG 251
           +S +FL+AR+  R+ +LK V  +  F AI+K I  NG   + L RL PL P+++ NY YG
Sbjct: 93  SSCSFLLARWLGRDLLLKYVGHSNTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYG 152

Query: 252 LTSVKFVPYVL 262
           LT++ F PY L
Sbjct: 153 LTTIAFWPYTL 163

Escherichia coli (strain K12) (taxid: 83333)

>sp|P67118|Y1528_MYCBO TVP38/TMEM64 family membrane protein Mb1528c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb1528c PE=3 SV=1

 Score = 53.9 bits (128), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 2/111 (1%)

Query: 150 FVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILK 209
           F+ V+  + +   P    T++AGLLFGSV G  I  +  T +A +A L+ R    +  L 
Sbjct: 72  FLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATGWQ--LN 129

Query: 210 LVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPY 260
            +   +    +D+ + E G+  +  LRL P++PF+  NY  G + V+ + +
Sbjct: 130 SLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSF 180

Mycobacterium bovis (taxid: 1765)

>sp|P67117|Y1491_MYCTU TVP38/TMEM64 family membrane protein Rv1491c/MT1538 OS=Mycobacterium tuberculosis GN=Rv1491c PE=3 SV=1

 Score = 53.9 bits (128), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 2/111 (1%)

Query: 150 FVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILK 209
           F+ V+  + +   P    T++AGLLFGSV G  I  +  T +A +A L+ R    +  L 
Sbjct: 72  FLLVHTVVTVPPFPRTAFTLAAGLLFGSVVGVFIAVVGSTASAVIAMLLVRATGWQ--LN 129

Query: 210 LVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPY 260
            +   +    +D+ + E G+  +  LRL P++PF+  NY  G + V+ + +
Sbjct: 130 SLVRRRAINRLDERLRERGWLAILSLRLIPVVPFAAINYAAGASGVRILSF 180

Mycobacterium tuberculosis (taxid: 1773)

>sp|Q6BQJ1|TVP38_DEBHA Golgi apparatus membrane protein TVP38 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=TVP38 PE=3 SV=1

 Score = 53.5 bits (127), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 2/82 (2%)

Query: 167 LTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGE 226
           L+M AG+++G V G I+++ +    +  +FL+ RY    R  +L+  NKKF A  + + E
Sbjct: 120 LSMLAGMVYGFVHGWILLACASISGSFCSFLVFRYLLHSRAERLMNSNKKFRAFSEILRE 179

Query: 227 N-GFRVVTLLRLSPLLPFSLGN 247
           +    ++ LLRL P LP+SL N
Sbjct: 180 DSSLFILVLLRLCP-LPYSLSN 200

Golgi membrane protein involved in vesicular trafficking and spindle migration.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

>sp|A7EFY0|TVP38_SCLS1 Golgi apparatus membrane protein tvp38 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tvp38 PE=3 SV=1

 Score = 52.4 bits (124), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 15/150 (10%)

Query: 103 SILAGVLLLVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAI 162
           +I+A +L +V+V  F     VY+ QI A L  F+       P G+ +   ++A   + A 
Sbjct: 91  AIVAAILNIVLVALF----LVYQHQIFASLAPFAERWRDL-PGGWMI---LWAMTFVAAF 142

Query: 163 PAI-----PLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKF 217
           P +      +T+ AG ++G   G  IV+ S    ++ +FL +R      + +LV  +K+F
Sbjct: 143 PPLIGYSSTITI-AGFVYGVPKGWAIVATSTVAGSTCSFLASRTILSTYVHRLVGKDKRF 201

Query: 218 LAIDKAIGENGFRVVTLLRLSPLLPFSLGN 247
            A+   +  +G +++ ++RL P LP+SL N
Sbjct: 202 EALALTLKHDGIKILCMIRLCP-LPYSLSN 230

Golgi membrane protein involved in vesicular trafficking and spindle migration.

Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (taxid: 665079)

>sp|P06568|YTXB_BACSU TVP38/TMEM64 family membrane protein YtxB OS=Bacillus subtilis (strain 168) GN=ytxB PE=3 SV=1

 Score = 48.1 bits (113), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 76/151 (50%), Gaps = 7/151 (4%)

Query: 111 LVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMS 170
           L V+ G G + +  K  +N    +   ++  +G     +F+ +     ++  P   ++++
Sbjct: 10  LAVLAGAGLLYWGNKTYLNVSPKEIRVWVLSFGVFAPLMFIGISIVRPLVLFPVSVISIA 69

Query: 171 AGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGN-KKFLAIDKAIGENGF 229
            GL FG + GT+        A++V+F  A  F+ ++      G+ ++  AI K + +NGF
Sbjct: 70  GGLAFGPLLGTLYTLFGSMCASAVSFFAAGLFSAKK-----NGHYERLEAIQKQMEDNGF 124

Query: 230 RVVTLLRLSPLLPFSLGNYLYGLTSVKFVPY 260
             + LLR+ P + F   +Y  GL++VK +PY
Sbjct: 125 FYIFLLRILP-INFDFVSYAAGLSNVKALPY 154

Bacillus subtilis (strain 168) (taxid: 224308)

>sp|A1CIM4|TVP38_ASPCL Golgi apparatus membrane protein tvp38 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=tvp38 PE=3 SV=1

 Score = 48.1 bits (113), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/171 (21%), Positives = 84/171 (49%), Gaps = 22/171 (12%)

Query: 107 GVLLLVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAI- 165
           G ++L ++ G G M  ++  Q+  +L   +   E    A + L++ V+     ++ P + 
Sbjct: 87  GAVILAILLGLGFM--IFTGQVFLWLEPVAETWEQSKLAFFVLWLCVF----FVSFPPLV 140

Query: 166 ---PLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDK 222
                   AG +FG   G ++ + +  + ++ +F+++R    + + +++E +K+F A+  
Sbjct: 141 GWSTFGTVAGFIFGIWKGWLLYATATVLGSTCSFIVSRTVLSKFVNRMMERDKRFAALAL 200

Query: 223 AIGENGFRVVTLLRLSPLLPFSLGN-----------YLYGLTSVKFVPYVL 262
            +  +G +++ ++RL P LP+S+ N            +YGL +    P +L
Sbjct: 201 TLKYDGLKLLCMIRLCP-LPYSVCNGAVSTFPTVHPLMYGLATAIITPKLL 250

Golgi membrane protein involved in vesicular trafficking and spindle migration.

Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) (taxid: 344612)

>sp|P76221|YDJZ_ECOLI TVP38/TMEM64 family inner membrane protein YdjZ OS=Escherichia coli (strain K12) GN=ydjZ PE=1 SV=1

 Score = 48.1 bits (113), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 10/125 (8%)

Query: 138 FIEGYGPAGYALFVAVYAGLEILA-----IPAIPLTMSAGLLFGSVTGTIIVSISGTVAA 192
           FI+ YG    AL   V   L IL      +PA  +T +   LFG+  G ++   S    A
Sbjct: 55  FIQSYG----ALAAVVSFLLMILQAIAAPLPAFLITFANASLFGAFWGGLLSWTSSMAGA 110

Query: 193 SVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGL 252
           ++ F IAR   RE + KL  G     ++D      G   + + RL P +PF   +Y  GL
Sbjct: 111 ALCFFIARVMGREVVEKL-TGKTVLDSMDGFFTRYGKHTILVCRLLPFVPFDPISYAAGL 169

Query: 253 TSVKF 257
           TS++F
Sbjct: 170 TSIRF 174

Escherichia coli (strain K12) (taxid: 83333)

>sp|A1CW44|TVP38_NEOFI Golgi apparatus membrane protein tvp38 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tvp38 PE=3 SV=1

 Score = 47.4 bits (111), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 56/103 (54%), Gaps = 12/103 (11%)

Query: 171 AGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFR 230
           AG +FG   G I+ + +  + ++ +F+++R    + + +++E +K+F A+   +  +G +
Sbjct: 148 AGFIFGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTLKYDGLK 207

Query: 231 VVTLLRLSPLLPFSLGN-----------YLYGLTSVKFVPYVL 262
           ++ ++RL P LP+S+ N            +YGL +    P +L
Sbjct: 208 LLCMIRLCP-LPYSVCNGAVSTFPTVHPLMYGLATALITPKLL 249

Golgi membrane protein involved in vesicular trafficking and spindle migration.

Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (taxid: 331117)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	274
449447579	334	PREDICTED: TVP38/TMEM64 family membrane	0.945	0.775	0.733	1e-102
255569090	334	conserved hypothetical protein [Ricinus	0.923	0.757	0.768	2e-96
224136135	331	predicted protein [Populus trichocarpa]	0.879	0.728	0.777	2e-89
18395168	344	SNARE associated Golgi protein family [A	0.846	0.674	0.745	3e-87
118486778	321	unknown [Populus trichocarpa]	0.905	0.772	0.725	7e-87
297740945	309	unnamed protein product [Vitis vinifera]	0.751	0.666	0.780	3e-86
224145050	289	predicted protein [Populus trichocarpa]	0.813	0.771	0.785	9e-86
388495562	332	unknown [Lotus japonicus]	0.897	0.740	0.685	2e-84
357470489	331	TVP38/TMEM64 family membrane protein slr	0.886	0.734	0.697	5e-84
297850738	346	hypothetical protein ARALYDRAFT_472530 [	0.861	0.682	0.735	7e-83

>gi|449447579|ref|XP_004141545.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Cucumis sativus] gi|449481518|ref|XP_004156206.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Cucumis sativus]

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 201/274 (73%), Positives = 226/274 (82%), Gaps = 15/274 (5%)

Query: 1   MRTLV-LRPQYHCHQPPSCFLTSSN-------SFIHSFKPHRRFHFVKPCSSLKQTKKQN 52
           MR L+ LRP      PP C L+S N       SF+ SF+P++RFHF+KPCSSLKQ+KK  
Sbjct: 1   MRVLLTLRPA--SSNPPPC-LSSPNFSPPLASSFLFSFRPNKRFHFLKPCSSLKQSKKP- 56

Query: 53  TLQKSTTNAPRSLGWFFNPKGDDDDNNNRIQGN-GMDAESEGLEGDTAVKGSILAGVLLL 111
           TLQK+ T+AP+S  W F+ K DDDD   +  GN G+D +   LE D+AVKG++LAGVLL+
Sbjct: 57  TLQKTPTSAPQSFKWLFSAKSDDDDAGEK--GNKGVDGDGAVLEDDSAVKGTLLAGVLLV 114

Query: 112 VVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSA 171
            V+GGF   GYVY+D INAFL QFS FI+GYGPAGYALFVAVYAGLEILAIPAIPLTMSA
Sbjct: 115 GVIGGFAFAGYVYRDPINAFLNQFSTFIDGYGPAGYALFVAVYAGLEILAIPAIPLTMSA 174

Query: 172 GLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRV 231
           GLLFGSV GT+IVSISGTVAASVAFLIARYFARERILKLVEGNKKF AIDKAIGENGF+V
Sbjct: 175 GLLFGSVIGTVIVSISGTVAASVAFLIARYFARERILKLVEGNKKFAAIDKAIGENGFKV 234

Query: 232 VTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGRY 265
           VTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLG +
Sbjct: 235 VTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSW 268

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255569090|ref|XP_002525514.1| conserved hypothetical protein [Ricinus communis] gi|223535193|gb|EEF36872.1| conserved hypothetical protein [Ricinus communis]

 Score =  357 bits (917), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 216/281 (76%), Positives = 234/281 (83%), Gaps = 28/281 (9%)

Query: 1   MRTLV-LRPQYHCHQPPSCFLTSSNS-------------FIHSFKPHRRFHFVKPCSSLK 46
           MRTL+ LRP      PPS  LTSS               F++SF+P++RFHF+ PCSSLK
Sbjct: 1   MRTLLSLRP------PPSPCLTSSFHSSSSSSSSSSCTSFLYSFRPNKRFHFLTPCSSLK 54

Query: 47  QTKKQNTLQKSTTNAPRSLGWFFNPKG--DDDDNNNRIQGNGMDAESEGLEGDTAVKGSI 104
           QTKKQ TLQKS T AP+SL WF NPKG  DDDD  N+    G + +  GLEGDTA+KG++
Sbjct: 55  QTKKQ-TLQKSNT-APQSLRWFLNPKGSGDDDDKINK----GENDDGGGLEGDTAIKGTL 108

Query: 105 LAGVLLLVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIPA 164
           LAGVLL+ VVGGFG +GYVY+DQINAFL QFSGFIEGYGPAGYALFVAVYAGLEILAIPA
Sbjct: 109 LAGVLLVGVVGGFGAVGYVYRDQINAFLNQFSGFIEGYGPAGYALFVAVYAGLEILAIPA 168

Query: 165 IPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAI 224
           IPLTMSAGLLFGSV GTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAI
Sbjct: 169 IPLTMSAGLLFGSVIGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAI 228

Query: 225 GENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGRY 265
           GENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLG +
Sbjct: 229 GENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSW 269

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224136135|ref|XP_002327389.1| predicted protein [Populus trichocarpa] gi|118487737|gb|ABK95692.1| unknown [Populus trichocarpa] gi|222835759|gb|EEE74194.1| predicted protein [Populus trichocarpa]

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 196/252 (77%), Positives = 216/252 (85%), Gaps = 11/252 (4%)

Query: 15  PPSCFLTSSNSFIHSFKPHRRFHFVKPCSSLKQTKKQ-NTLQKSTTNAPRSLGWFFNPKG 73
           PP C L     F +SF+P++R HF+ PCSSLKQ KKQ  TL+K  TNAP+SL WF NPKG
Sbjct: 25  PPPCTL-----FHYSFRPNKRIHFLTPCSSLKQRKKQPETLRK--TNAPQSLRWFLNPKG 77

Query: 74  DDDDNNNRIQGNGMDAESEGLEGDTAVKGSILAGVLLLVVVGGFGTMGYVYKDQINAFLT 133
           DD D+  +          EGLEGDTA KG++LAGVLL+ VVGGFG +GY+YKDQINAFL 
Sbjct: 78  DDSDDKIKGD---GGEAEEGLEGDTAFKGTLLAGVLLVGVVGGFGAVGYIYKDQINAFLN 134

Query: 134 QFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAAS 193
           QFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGS+ GTIIVSISGTVAAS
Sbjct: 135 QFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSLIGTIIVSISGTVAAS 194

Query: 194 VAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLT 253
           +AFLIARYFARERILKLV+GNKKFLAIDKAIGENGF+VVTLLRLSPLLPFSLGNYLYGLT
Sbjct: 195 IAFLIARYFARERILKLVQGNKKFLAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLT 254

Query: 254 SVKFVPYVLGRY 265
           SVKF+PYVLG +
Sbjct: 255 SVKFIPYVLGSW 266

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18395168|ref|NP_564182.1| SNARE associated Golgi protein family [Arabidopsis thaliana] gi|2462839|gb|AAB72174.1| unknown [Arabidopsis thaliana] gi|15215602|gb|AAK91346.1| At1g22850/F29G20_19 [Arabidopsis thaliana] gi|20856179|gb|AAM26652.1| At1g22850/F29G20_19 [Arabidopsis thaliana] gi|332192175|gb|AEE30296.1| SNARE associated Golgi protein family [Arabidopsis thaliana]

 Score =  327 bits (839), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 179/240 (74%), Positives = 203/240 (84%), Gaps = 8/240 (3%)

Query: 30  FKPHRRFHFVKPCSSLKQTKKQNTLQK-STTNAPRSLGWFFNPKGDDDDNNNRIQGNGMD 88
           F+ ++RFHF+KPCSSLKQTKK+      ST   P+SL WFFN K  +D+N+     + + 
Sbjct: 36  FRLYKRFHFLKPCSSLKQTKKKKQQSLPSTAPPPQSLRWFFNSKSTNDENDE----DDVK 91

Query: 89  AESE---GLEGDTAVKGSILAGVLLLVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPA 145
           +ES+   G EGD A+KG+ILAGVLL+  VGGF  +GYVY+DQIN FLTQFS +IEGYG A
Sbjct: 92  SESDDDGGSEGDAAIKGTILAGVLLIGTVGGFAGVGYVYRDQINTFLTQFSTYIEGYGTA 151

Query: 146 GYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARE 205
           GYALF+AVYAGLEILAIPA+PLTMSAGLLFG + GTIIVSISGT+AASVAFLIARYFARE
Sbjct: 152 GYALFIAVYAGLEILAIPALPLTMSAGLLFGPLIGTIIVSISGTMAASVAFLIARYFARE 211

Query: 206 RILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGRY 265
           RILKLVE NKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLG +
Sbjct: 212 RILKLVEDNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSW 271

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118486778|gb|ABK95224.1| unknown [Populus trichocarpa]

 Score =  326 bits (835), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 198/273 (72%), Positives = 220/273 (80%), Gaps = 25/273 (9%)

Query: 1   MRTLV-LRPQYHCHQPPSCFLTSSNS------FIHSFKPHRRFHFVKPCSSLKQTKKQN- 52
           MRTL+  RP       P C  ++ NS      F +S + ++RFHF+ PCSSLKQ KKQ  
Sbjct: 1   MRTLLNSRPLTPL---PPCLASNFNSSPFRSLFHYSLRTNKRFHFLSPCSSLKQKKKQQQ 57

Query: 53  TLQKSTTNAPRSLGWFFNPKGDDDDNNNRIQGNGMDAESEGLEGDTAVKGSILAGVLLLV 112
           TL+K  TNAP+S+ WF N KGDD +              EGLEGDTA KG++LAGVLL+ 
Sbjct: 58  TLRK--TNAPQSVRWFLNTKGDDSE------------AEEGLEGDTAFKGTLLAGVLLVG 103

Query: 113 VVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAG 172
           VVGGFG +GY+YKDQINAFL QFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAG
Sbjct: 104 VVGGFGAVGYIYKDQINAFLNQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAG 163

Query: 173 LLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVV 232
           LLFGS+ GTIIVSISGT AAS+AFLIARYFARERILKLVEGNKKFLAIDKAIGENGF+VV
Sbjct: 164 LLFGSLIGTIIVSISGTAAASIAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFKVV 223

Query: 233 TLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGRY 265
           TLLRLSPLLPFSLGNYLYGLTSVKF+PYVLG +
Sbjct: 224 TLLRLSPLLPFSLGNYLYGLTSVKFIPYVLGSW 256

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740945|emb|CBI31257.3| unnamed protein product [Vitis vinifera]

 Score =  323 bits (829), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 181/232 (78%), Positives = 194/232 (83%), Gaps = 26/232 (11%)

Query: 34  RRFHFVKPCSSLKQTKKQNTLQKSTTNAPRSLGWFFNPKGDDDDNNNRIQGNGMDAESEG 93
           +RFHF+KPCSSLKQTKKQ     S +NAP+SL WF NPK                     
Sbjct: 39  KRFHFLKPCSSLKQTKKQLQKTSSGSNAPQSLRWFLNPK--------------------- 77

Query: 94  LEGDTAVKGSILAGVLLLVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGYALFVAV 153
                ++KG++LAG+LL+ VVGGF T+GYVY+DQINAFLTQFSGFIEGYGPAGYALFVAV
Sbjct: 78  -----SIKGTLLAGLLLVGVVGGFATVGYVYRDQINAFLTQFSGFIEGYGPAGYALFVAV 132

Query: 154 YAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEG 213
           YAGLEILAIPAIPLTMSAGLLFGS TGTIIVSISGTVAASVAFLIARYFARERILKLVEG
Sbjct: 133 YAGLEILAIPAIPLTMSAGLLFGSFTGTIIVSISGTVAASVAFLIARYFARERILKLVEG 192

Query: 214 NKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGRY 265
           NKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLG +
Sbjct: 193 NKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSW 244

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224145050|ref|XP_002325508.1| predicted protein [Populus trichocarpa] gi|222862383|gb|EEE99889.1| predicted protein [Populus trichocarpa]

 Score =  322 bits (826), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 187/238 (78%), Positives = 205/238 (86%), Gaps = 15/238 (6%)

Query: 29  SFKPHRRFHFVKPCSSLKQTKKQN-TLQKSTTNAPRSLGWFFNPKGDDDDNNNRIQGNGM 87
           S + ++RFHF+ PCSSLKQ KKQ  TL+K  TNAP+S+ WF N KGDD +          
Sbjct: 1   SLRTNKRFHFLSPCSSLKQKKKQQQTLRK--TNAPQSVRWFLNTKGDDSE---------- 48

Query: 88  DAESEGLEGDTAVKGSILAGVLLLVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGY 147
               EGLEGDTA KG++LAGVLL+ VVGGFG +GY+YKDQINAFL QFSGFIEGYGPAGY
Sbjct: 49  --AEEGLEGDTAFKGTLLAGVLLVGVVGGFGAVGYIYKDQINAFLNQFSGFIEGYGPAGY 106

Query: 148 ALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERI 207
           ALFVAVYAGLEILAIPAIPLTMSAGLLFGS+ GTIIVSISGT AAS+AFLIARYFARERI
Sbjct: 107 ALFVAVYAGLEILAIPAIPLTMSAGLLFGSLIGTIIVSISGTAAASIAFLIARYFARERI 166

Query: 208 LKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGRY 265
           LKLVEGNKKFLAIDKAIGENGF+VVTLLRLSPLLPFSLGNYLYGLTSVKF+PYVLG +
Sbjct: 167 LKLVEGNKKFLAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFIPYVLGSW 224

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388495562|gb|AFK35847.1| unknown [Lotus japonicus]

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 179/261 (68%), Positives = 202/261 (77%), Gaps = 15/261 (5%)

Query: 11  HCHQPPSCFLTSSNSFIHSFKPHRRFHFVKPCSSLKQTKKQNT-----LQKSTTNAPRSL 65
           H   PPS  L         F  HRRFHF+ PCSSL+QTKKQ       L K  T AP   
Sbjct: 16  HNFSPPSSSLI--------FTSHRRFHFLTPCSSLRQTKKQQQQQQQQLTKINT-APSGF 66

Query: 66  GWFFNPKGDDDDNNNRIQGNGMDAESE-GLEGDTAVKGSILAGVLLLVVVGGFGTMGYVY 124
              F+PK DDDD+++    +    + +   +  TA+KG++LAGVLLL  VGGF  +GY+Y
Sbjct: 67  KRLFSPKPDDDDDDDDDDDDDDGDKKQPDSDTGTALKGTLLAGVLLLGFVGGFAAVGYIY 126

Query: 125 KDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIV 184
           +D IN+FL Q S FIEGYGP GYA+FVAVYAGLEILAIPAIPLTMSAGLLFGSVTGT+IV
Sbjct: 127 RDPINSFLNQLSLFIEGYGPTGYAIFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTVIV 186

Query: 185 SISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFS 244
           SISGTVAASVAFLIARYFARERILKLVEGNKKFLA+DKAIGENGF+VVTLLRLSPLLPFS
Sbjct: 187 SISGTVAASVAFLIARYFARERILKLVEGNKKFLAVDKAIGENGFKVVTLLRLSPLLPFS 246

Query: 245 LGNYLYGLTSVKFVPYVLGRY 265
           LGNYLYGLTSVKF+PYVLG +
Sbjct: 247 LGNYLYGLTSVKFLPYVLGSW 267

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357470489|ref|XP_003605529.1| TVP38/TMEM64 family membrane protein slr0305 [Medicago truncatula] gi|355506584|gb|AES87726.1| TVP38/TMEM64 family membrane protein slr0305 [Medicago truncatula]

 Score =  317 bits (811), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 173/248 (69%), Positives = 201/248 (81%), Gaps = 5/248 (2%)

Query: 21  TSSNSFIHSFKPHRRFHFVKPCSSLKQTKKQNTLQKSTTNAPRSLGWFFNPKGDDDDNNN 80
           T++N    +F  ++ FHF+ P SSLKQTKKQ +   +T   P  L   FNPK ++D+++ 
Sbjct: 20  TNNNRLSTTFSSYKCFHFLTPHSSLKQTKKQPSRINNTN--PSRLKRLFNPKNENDNDDK 77

Query: 81  RIQGNGMDAESEGLEGD---TAVKGSILAGVLLLVVVGGFGTMGYVYKDQINAFLTQFSG 137
             +      ESE  E +    A+KG++LAG LL+  VGGF ++GY+Y++ IN FL QFSG
Sbjct: 78  NEKKKKKRGESEKDEEEDNGVALKGTLLAGFLLVGFVGGFASVGYIYREPINTFLNQFSG 137

Query: 138 FIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFL 197
           FIEGYG AGYALFVAVYAGLEILAIPAIPLTMSAGLLFGS+TGTIIVSISGTVAASVAFL
Sbjct: 138 FIEGYGSAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSLTGTIIVSISGTVAASVAFL 197

Query: 198 IARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKF 257
           IARYFARERILKLVEGNKKFLAIDKAIGENGF+VVTLLRLSPLLPFSLGNYLYGLTSVKF
Sbjct: 198 IARYFARERILKLVEGNKKFLAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKF 257

Query: 258 VPYVLGRY 265
           +PYVLG +
Sbjct: 258 LPYVLGSW 265

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297850738|ref|XP_002893250.1| hypothetical protein ARALYDRAFT_472530 [Arabidopsis lyrata subsp. lyrata] gi|297339092|gb|EFH69509.1| hypothetical protein ARALYDRAFT_472530 [Arabidopsis lyrata subsp. lyrata]

 Score =  313 bits (801), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 181/246 (73%), Positives = 201/246 (81%), Gaps = 10/246 (4%)

Query: 29  SFKPHRRFHFVKPCSSLKQTKKQNTLQK-STTNAPRSLGWFFNPKGDDDDNNNRIQGNGM 87
           S + +RRFHF+KPCSSLKQTKK+      ST   P+SL WFFNPK  DDDN+     +  
Sbjct: 33  SSRLYRRFHFLKPCSSLKQTKKKKQQSLPSTAPPPQSLRWFFNPKSSDDDNDEDDAKSES 92

Query: 88  DAESEGLEGDTAVKGSILAGVLLLVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGY 147
           D +  G EGD A++G+ILAGVLL+  VGGF  +GYVY+DQIN FLTQFS +IEGYG AGY
Sbjct: 93  D-DGGGSEGDAAIQGTILAGVLLIGTVGGFAGVGYVYRDQINTFLTQFSTYIEGYGTAGY 151

Query: 148 ALFVAVYAGLE--------ILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIA 199
           ALF+AVYAGLE        ILAIPA+PLTMSAGLLFG + GTIIVSISGT+AASVAFLIA
Sbjct: 152 ALFIAVYAGLEASFFILFHILAIPALPLTMSAGLLFGPLIGTIIVSISGTMAASVAFLIA 211

Query: 200 RYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVP 259
           RYFARERILKLVE NKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVP
Sbjct: 212 RYFARERILKLVEDNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVP 271

Query: 260 YVLGRY 265
           YVLG +
Sbjct: 272 YVLGSW 277

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	274
TAIR|locus:2017769	344	AT1G22850 "AT1G22850" [Arabido	0.861	0.686	0.621	4.3e-70
UNIPROTKB|P76219	236	ydjX "predicted inner membrane	0.478	0.555	0.328	4.7e-16
TAIR|locus:2014530	274	AT1G03260 [Arabidopsis thalian	0.459	0.459	0.309	1.4e-11
TAIR|locus:2179654	280	AT5G19070 [Arabidopsis thalian	0.5	0.489	0.292	1.4e-10
UNIPROTKB|Q3ABR1	219	CHY_1595 "Putative membrane pr	0.357	0.447	0.310	6.8e-05
TIGR_CMR|CHY_1595	219	CHY_1595 "putative membrane pr	0.357	0.447	0.310	6.8e-05
GENEDB_PFALCIPARUM|MAL13P1.329	408	MAL13P1.329 "hypothetical prot	0.518	0.348	0.248	9.2e-05
UNIPROTKB|Q8ID52	408	MAL13P1.329 "Uncharacterized p	0.518	0.348	0.248	9.2e-05
UNIPROTKB|Q74DK2	226	GSU1314 "Membrane protein, put	0.423	0.513	0.268	0.00018
TIGR_CMR|GSU_1314	226	GSU_1314 "membrane protein, pu	0.423	0.513	0.268	0.00018

TAIR|locus:2017769 AT1G22850 "AT1G22850" [Arabidopsis thaliana (taxid:3702)]

 Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
 Identities = 148/238 (62%), Positives = 168/238 (70%)

Query:    29 SFKPHRRFHFVKPCSXXXXXXXXXXXXXXXXXAP-RSLGWFFNPKGDDDDNNNRIQGNGM 87
             SF+ ++RFHF+KPCS                  P +SL WFFN K  +D+N+     +  
Sbjct:    35 SFRLYKRFHFLKPCSSLKQTKKKKQQSLPSTAPPPQSLRWFFNSKSTNDENDEDDVKSES 94

Query:    88 DAESEGLEGDTAVKGSIXXXXXXXXXXXXXXTMGYVYKDQINAFLTQFSGFIEGYGPAGY 147
             D +  G EGD A+KG+I               +GYVY+DQIN FLTQFS +IEGYG AGY
Sbjct:    95 DDDG-GSEGDAAIKGTILAGVLLIGTVGGFAGVGYVYRDQINTFLTQFSTYIEGYGTAGY 153

Query:   148 ALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERI 207
             ALF+AVYAGLEILAIPA+PLTMSAGLLFG + GTIIVSISGT+AASVAFLIARYFARERI
Sbjct:   154 ALFIAVYAGLEILAIPALPLTMSAGLLFGPLIGTIIVSISGTMAASVAFLIARYFARERI 213

Query:   208 LKLVEGNKKFLAIDKAIGENGFRVVTXXXXXXXXXXXXGNYLYGLTSVKFVPYVLGRY 265
             LKLVE NKKFLAIDKAIGENGFRVVT            GNYLYGLTSVKFVPYVLG +
Sbjct:   214 LKLVEDNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSW 271

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0010264 "myo-inositol hexakisphosphate biosynthetic process" evidence=RCA

UNIPROTKB|P76219 ydjX "predicted inner membrane protein" [Escherichia coli K-12 (taxid:83333)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 43/131 (32%), Positives = 70/131 (53%)

Query:   132 LTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVA 191
             L      I   G  GY+L++ ++    +L +P   L ++ G++FG + GT++  I+ T+A
Sbjct:    33 LPHLQTLIRQSGFFGYSLYILLFIIATLLLLPGSILVIAGGIVFGPLLGTLLSLIAATLA 92

Query:   192 ASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTXXXXXXXXXXXXGNYLYG 251
             +S +FL+AR+  R+ +LK V  +  F AI+K I  NG   +              NY YG
Sbjct:    93 SSCSFLLARWLGRDLLLKYVGHSNTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYG 152

Query:   252 LTSVKFVPYVL 262
             LT++ F PY L
Sbjct:   153 LTTIAFWPYTL 163

GO:0005886 "plasma membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2014530 AT1G03260 [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 1.4e-11, P = 1.4e-11
 Identities = 39/126 (30%), Positives = 60/126 (47%)

Query:   140 EGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIA 199
             E  GP G       Y  L I+A+PA  LT+  G LFG   G +  S+  T+ A+ AFL+ 
Sbjct:    45 EDLGPFGPLALALAYIPLTIVAVPASVLTLGGGYLFGLPVGFVADSLGATLGATAAFLLG 104

Query:   200 RYFARERILKLVEGNKKFLAIDKAIGENGFRVVTXXXXXXXXXXXXGNYLYGLTSVKFVP 259
             R   +  +   ++   KF A+  AI ++GF++V              NYL  +T V+   
Sbjct:   105 RTIGKSYVTSKIKHYPKFQAVSVAIQKSGFKIVLLLRVVPILPFNMLNYLLSVTPVRLGE 164

Query:   260 YVLGRY 265
             Y+L  +
Sbjct:   165 YMLATW 170

GO:0005886 "plasma membrane" evidence=ISM

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2179654 AT5G19070 [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 1.4e-10, P = 1.4e-10
 Identities = 41/140 (29%), Positives = 70/140 (50%)

Query:   128 INAFLTQFSGFIE-GYGPAG-YALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVS 185
             +   L  F  ++E   GP G +AL VA Y  L +LA+PA  LT+  G LFG   G +  S
Sbjct:    30 VEKLLKDFLLWVEQDLGPWGPFALAVA-YIPLTVLAVPASVLTLGGGYLFGLPIGFVADS 88

Query:   186 ISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTXXXXXXXXXXXX 245
             +  T+ +  AFL+ R   +  ++  ++   +F ++  AI ++GF++              
Sbjct:    89 VGATLGSGAAFLLGRTIGKPFVVAKLKDYPQFQSVALAIEKSGFKICLLLRLAPLLPFSM 148

Query:   246 GNYLYGLTSVKFVPYVLGRY 265
              NYL  +T ++  PY+L  +
Sbjct:   149 LNYLLSVTPIRLGPYLLSSW 168

GO:0005886 "plasma membrane" evidence=ISM

GO:0015824 "proline transport" evidence=RCA

UNIPROTKB|Q3ABR1 CHY_1595 "Putative membrane protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 115 (45.5 bits), Expect = 6.8e-05, P = 6.8e-05
 Identities = 32/103 (31%), Positives = 56/103 (54%)

Query:   162 IPAIPLTMSAGLLFGSVTGTIIVSISGTV-AASVAFLIARYFARERILKLVEGNKKFL-A 219
             +P   L  + G +FG V G II+S+SG+V  A++AFL AR+  R  + + ++   ++L  
Sbjct:    68 VPLFILVAANGFIFG-VLGGIIISLSGSVLGATIAFLAARFLGRNFLSRFLK--PEYLDK 124

Query:   220 IDKAIGENGFRVVTXXXXXXXXXXXXGNYLYGLTSVKFVPYVL 262
             +     ++G +VV              +YL GL++++F PY L
Sbjct:   125 VHSFSCKDGPKVVFFARLIPVLPSSIVSYLAGLSNMRFTPYFL 167

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CHY_1595 CHY_1595 "putative membrane protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 115 (45.5 bits), Expect = 6.8e-05, P = 6.8e-05
 Identities = 32/103 (31%), Positives = 56/103 (54%)

Query:   162 IPAIPLTMSAGLLFGSVTGTIIVSISGTV-AASVAFLIARYFARERILKLVEGNKKFL-A 219
             +P   L  + G +FG V G II+S+SG+V  A++AFL AR+  R  + + ++   ++L  
Sbjct:    68 VPLFILVAANGFIFG-VLGGIIISLSGSVLGATIAFLAARFLGRNFLSRFLK--PEYLDK 124

Query:   220 IDKAIGENGFRVVTXXXXXXXXXXXXGNYLYGLTSVKFVPYVL 262
             +     ++G +VV              +YL GL++++F PY L
Sbjct:   125 VHSFSCKDGPKVVFFARLIPVLPSSIVSYLAGLSNMRFTPYFL 167

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=ISS

GENEDB_PFALCIPARUM|MAL13P1.329 MAL13P1.329 "hypothetical protein, conserved" [Plasmodium falciparum (taxid:5833)]

 Score = 119 (46.9 bits), Expect = 9.2e-05, P = 9.2e-05
 Identities = 38/153 (24%), Positives = 65/153 (42%)

Query:   131 FLTQFSGFIEGYGPAG---YALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTII---- 183
             FL      IE  G  G     LF+ ++  L  L +    + + +GL+F  V G  +    
Sbjct:   188 FLNIIHIVIEWVGKQGSWSILLFILLFTFLSPLFMSVEIMCVGSGLIFSGVYGKALGIFV 247

Query:   184 ----VSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTXXXXXX 239
                 V++   +  S+ F I+RY     I K + G   ++A ++AI  NG   V       
Sbjct:   248 AVFSVAVGYVLGMSLCFFISRYLIHNYIYKKLMGYPIYMAFNQAINTNGLSFVLLIRLSP 307

Query:   240 XXXXXXGNYLYGLTSVKFVPYVLGRYDYYPSYY 272
                    +Y+ G+TS+K+  + +G     PS +
Sbjct:   308 ILPASVVSYILGVTSLKYKHFAIGSISALPSIF 340

GO:0016020 "membrane" evidence=ISS

UNIPROTKB|Q8ID52 MAL13P1.329 "Uncharacterized protein" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 119 (46.9 bits), Expect = 9.2e-05, P = 9.2e-05
 Identities = 38/153 (24%), Positives = 65/153 (42%)

Query:   131 FLTQFSGFIEGYGPAG---YALFVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTII---- 183
             FL      IE  G  G     LF+ ++  L  L +    + + +GL+F  V G  +    
Sbjct:   188 FLNIIHIVIEWVGKQGSWSILLFILLFTFLSPLFMSVEIMCVGSGLIFSGVYGKALGIFV 247

Query:   184 ----VSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTXXXXXX 239
                 V++   +  S+ F I+RY     I K + G   ++A ++AI  NG   V       
Sbjct:   248 AVFSVAVGYVLGMSLCFFISRYLIHNYIYKKLMGYPIYMAFNQAINTNGLSFVLLIRLSP 307

Query:   240 XXXXXXGNYLYGLTSVKFVPYVLGRYDYYPSYY 272
                    +Y+ G+TS+K+  + +G     PS +
Sbjct:   308 ILPASVVSYILGVTSLKYKHFAIGSISALPSIF 340

GO:0016020 "membrane" evidence=ISS

UNIPROTKB|Q74DK2 GSU1314 "Membrane protein, putative" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 112 (44.5 bits), Expect = 0.00018, P = 0.00018
 Identities = 32/119 (26%), Positives = 57/119 (47%)

Query:   148 ALFVAVYAGLEILAIP-AIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARER 206
             A+F+A+Y     L++P A  L+++AG LFG+V GT       T+ A++AFL+ RY   + 
Sbjct:    53 AVFLAIYIIQTALSLPGATILSLAAGALFGAVAGTAWAVTGATIGATLAFLLTRYLFHDA 112

Query:   207 ILKLVEGNKKFLAIDKAIGENGFRVVTXXXXXXXXXXXXGNYLYGLTSVKFVPYVLGRY 265
             + +      +   I++ + + G   +              N   GLT +    +VLG +
Sbjct:   113 VQRRF--GPRLEGINRELEKAGLNYLLFLRLVPLFPFFLINLGAGLTRLPLRTFVLGTF 169

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|GSU_1314 GSU_1314 "membrane protein, putative" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 112 (44.5 bits), Expect = 0.00018, P = 0.00018
 Identities = 32/119 (26%), Positives = 57/119 (47%)

Query:   148 ALFVAVYAGLEILAIP-AIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARER 206
             A+F+A+Y     L++P A  L+++AG LFG+V GT       T+ A++AFL+ RY   + 
Sbjct:    53 AVFLAIYIIQTALSLPGATILSLAAGALFGAVAGTAWAVTGATIGATLAFLLTRYLFHDA 112

Query:   207 ILKLVEGNKKFLAIDKAIGENGFRVVTXXXXXXXXXXXXGNYLYGLTSVKFVPYVLGRY 265
             + +      +   I++ + + G   +              N   GLT +    +VLG +
Sbjct:   113 VQRRF--GPRLEGINRELEKAGLNYLLFLRLVPLFPFFLINLGAGLTRLPLRTFVLGTF 169


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.141   0.430    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      274       231   0.00084  113 3  11 22  0.37    33
                                                     32  0.42    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  584 (62 KB)
  Total size of DFA:  167 KB (2098 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.39u 0.13s 17.52t   Elapsed:  00:00:01
  Total cpu time:  17.39u 0.13s 17.52t   Elapsed:  00:00:01
  Start:  Sat May 11 07:03:30 2013   End:  Sat May 11 07:03:31 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00032083001	SubName- Full=Chromosome chr18 scaffold_61, whole genome shotgun sequence; (333 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00031815001	SubName- Full=Chromosome chr18 scaffold_59, whole genome shotgun sequence; (279 aa)			•						0.496

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	274
COG0398	223	COG0398, COG0398, Uncharacterized conserved protei	6e-32
pfam09335	123	pfam09335, SNARE_assoc, SNARE associated Golgi pro	3e-19

>gnl|CDD|223475 COG0398, COG0398, Uncharacterized conserved protein [Function unknown]

 Score =  117 bits (294), Expect = 6e-32
 Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 4/162 (2%)

Query: 103 SILAGVLLLVVVGGFGTMGYVYKDQINAFLTQFSGFIEGYGPAGYAL-FVAVYAGLEILA 161
            +LA +L L V+ G   +G +              +I+ YG  G  + F+ +Y    +  
Sbjct: 9   KLLAALLFLGVIIGIIYLGLLVLLLDPE---TLREWIQAYGALGPLVFFILLYLVATLPI 65

Query: 162 IPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAID 221
           IP   LT++ GLLFG   G +   I  T  +++AFL+ARY  R+ +LK V G +K   ID
Sbjct: 66  IPGSILTLAGGLLFGPFLGFLYSLIGATAGSTLAFLLARYLGRDWVLKFVGGKEKVQRID 125

Query: 222 KAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLG 263
             +  NGF  + LLRL P+ PF L NY  GLT + F  + + 
Sbjct: 126 AGLERNGFWAILLLRLIPIFPFDLVNYAAGLTGISFRDFAIA 167

Length = 223

>gnl|CDD|220186 pfam09335, SNARE_assoc, SNARE associated Golgi protein

 Score = 80.8 bits (200), Expect = 3e-19
 Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 3/105 (2%)

Query: 162 IPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNK---KFL 218
           +P   L ++AG LFG   G ++  +   + + +A+L+ RY  R  + + +   K   +  
Sbjct: 1   LPGTVLLIAAGALFGPWLGFLVALLGALLGSLLAYLLGRYLGRRALRRRLLKEKAFQRLQ 60

Query: 219 AIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLG 263
            +++ +   GF+ + LLRL P +P  L NY+ GL+ V F  ++LG
Sbjct: 61  RVERLVERYGFKALLLLRLLPGVPRDLVNYVAGLSRVSFRRFLLG 105

This is a family of SNARE associated Golgi proteins. The yeast member of this family localises with the t-SNARE Tlg2. Length = 123

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	274
COG0398	223	Uncharacterized conserved protein [Function unknow	99.96
PF09335	123	SNARE_assoc: SNARE associated Golgi protein; Inter	99.82
PRK10847	219	hypothetical protein; Provisional	99.73
COG0586	208	DedA Uncharacterized membrane-associated protein [	99.73
COG1238	161	Predicted membrane protein [Function unknown]	99.41
KOG3140	275	consensus Predicted membrane protein [Function unk	99.39
PF06695	121	Sm_multidrug_ex: Putative small multi-drug export	96.23
PLN02953	403	phosphatidate cytidylyltransferase	92.77
PF06695	121	Sm_multidrug_ex: Putative small multi-drug export	89.55
COG0398	223	Uncharacterized conserved protein [Function unknow	86.08
PRK13109	358	flhB flagellar biosynthesis protein FlhB; Reviewed	85.9
PRK01844	72	hypothetical protein; Provisional	83.3

>COG0398 Uncharacterized conserved protein [Function unknown]

Probab=99.96  E-value=5.7e-28  Score=216.61  Aligned_cols=150  Identities=34%  Similarity=0.587  Sum_probs=136.4

Q ss_pred             HHhHHHHHHHHHHHHHHHHhhccHHHHH-HHHHHHhhhcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024013          122 YVYKDQINAFLTQFSGFIEGYGPAGYAL-FVAVYAGLEILAIPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIAR  200 (274)
Q Consensus       122 ~~~~~~L~~~l~~l~~~i~~~g~~g~li-fvll~i~~~~l~iP~~~L~iaaG~lFG~~~G~l~~~lG~~lGa~i~F~IgR  200 (274)
                      +..........+++++|++++|.+++++ |++.++...+.++|++++++++|++||+++|++++++|+++|++++|+++|
T Consensus        25 ~~~~~~~~~~~~~l~~~i~~~g~~~pl~~fil~~l~~~~~~iP~~il~l~~g~ifG~~~G~~~s~~G~~~gs~~~Fll~R  104 (223)
T COG0398          25 YLGLLVLLLDPETLREWIQAYGALGPLVFFILLYLVATLPIIPGSILTLAGGLLFGPFLGFLYSLIGATAGSTLAFLLAR  104 (223)
T ss_pred             HHHHHHhccCHHHHHHHHHHcCchHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3333445555688999999999999999 666667777778999999999999999999999999999999999999999


Q ss_pred             HHhHHHHHHHhcCcHHHHHHHHHHhhcchHhhhHHhhccccchhhhhHhhhccCCChhhHHHHHhhh-cccc
Q 024013          201 YFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGRYDY-YPSY  271 (274)
Q Consensus       201 ~lGr~~v~~~l~~~~kl~ri~~~l~r~G~~~V~llRliPviP~~vvny~aGls~i~~~~Fll~tllG-iP~~  271 (274)
                      ++||+++++..++++++++++++++|+|++.++++|++|++|++++||+||+++|++++|++++++| +|++
T Consensus       105 ~~gr~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~lrl~P~~P~~lvn~aaglt~is~~~f~ias~lG~~P~~  176 (223)
T COG0398         105 YLGRDWVLKFVGGKEKVQRIDAGLERNGFWAILLLRLIPIFPFDLVNYAAGLTGISFRDFAIATLLGKLPGT  176 (223)
T ss_pred             HHhHHHHHHHhcccHHHHHHHHHHHhCChHHHHHHHHhhcCCHHHHHHHHhccCCcHHHHHHHHHHhcccHH
Confidence            9999999999888789999999999999999999999999999999999999999999999999999 4654

>PF09335 SNARE_assoc: SNARE associated Golgi protein; InterPro: IPR015414 This is a entry contains SNARE associated Golgi proteins

Probab=99.82  E-value=1.4e-19  Score=145.27  Aligned_cols=107  Identities=33%  Similarity=0.578  Sum_probs=97.6

Q ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCcHHHHH---HHHHHhhcchHhhhHHhhc
Q 024013          162 IPAIPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLA---IDKAIGENGFRVVTLLRLS  238 (274)
Q Consensus       162 iP~~~L~iaaG~lFG~~~G~l~~~lG~~lGa~i~F~IgR~lGr~~v~~~l~~~~kl~r---i~~~l~r~G~~~V~llRli  238 (274)
                      +|++++++++|+++|++.|++++++|+++|+.+.|++||+++++..+++..++++.++   .++.++|+|++.+++.|++
T Consensus         1 iP~~~~~~~~g~~~g~~~~~~~~~~g~~~g~~~~y~lgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~   80 (123)
T PF09335_consen    1 IPGSILLIAAGALFGPWLGFLIATLGAVLGSLLAYLLGRYFGRRRLRRKLRKKKRIKRIERIERWFQKYGFWVLFLSRFI   80 (123)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence            6999999999999999999999999999999999999999997666665554455555   8899999999999999999


Q ss_pred             cccchhhhhHhhhccCCChhhHHHHHhhhc
Q 024013          239 PLLPFSLGNYLYGLTSVKFVPYVLGRYDYY  268 (274)
Q Consensus       239 PviP~~vvny~aGls~i~~~~Fll~tllGi  268 (274)
                      |++|++++|+++|+++||+++|++++++|.
T Consensus        81 P~~P~~~~~~~ag~~~~~~~~f~~~~~~g~  110 (123)
T PF09335_consen   81 PGLPFDVVNYLAGITRMPFRRFFLASLIGK  110 (123)
T ss_pred             HHccHHHHHHHHHccCCCHHHHHHHHHHHH
Confidence            999999999999999999999999999973

The yeast member of this family (P36164 from SWISSPROT) localises with the t-SNARE Tlg2 [].

>PRK10847 hypothetical protein; Provisional

Probab=99.73  E-value=4.8e-17  Score=145.40  Aligned_cols=133  Identities=17%  Similarity=0.278  Sum_probs=109.0

Q ss_pred             HHHHHHHhhccHHHH-HHHHHHHhh---hcccCChHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024013          134 QFSGFIEGYGPAGYA-LFVAVYAGL---EILAIPAIPLTMSAGLLFG-------SVTGTIIVSISGTVAASVAFLIARYF  202 (274)
Q Consensus       134 ~l~~~i~~~g~~g~l-ifvll~i~~---~~l~iP~~~L~iaaG~lFG-------~~~G~l~~~lG~~lGa~i~F~IgR~l  202 (274)
                      .+.++++++|+|++. +|++++...   ...++|++.+.+++|++.+       ++..++++++|+++|+.++|++||++
T Consensus        17 ~~~~~~~~~g~~~y~~lfl~~~le~~~~~~~~lPge~~l~~~G~la~~~~~~~~~~~~~~~a~~Ga~lG~~i~Y~lGr~~   96 (219)
T PRK10847         17 HLAELVAQYGVWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALASLPTNDLNVHMMVALMLIAAIVGDAVNYTIGRLF   96 (219)
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHhccccCCCCCchHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            456678888988865 455445432   2356899999999998854       45678888999999999999999999


Q ss_pred             hHHHHHHH---hcCcHHHHHHHHHHhhcchHhhhHHhhccccchhhhhHhhhccCCChhhHHHHHhhh
Q 024013          203 ARERILKL---VEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGRYDY  267 (274)
Q Consensus       203 Gr~~v~~~---l~~~~kl~ri~~~l~r~G~~~V~llRliPviP~~vvny~aGls~i~~~~Fll~tllG  267 (274)
                      |++.+++.   ..+++++++.+++++|||.+.+++.|++|+++ ++++++||+++||+++|++.+++|
T Consensus        97 G~~~l~~~~~~~~~~~~l~~~~~~~~r~G~~~v~i~RfiP~~R-~~~~~~aG~~~m~~~~F~~~~~lg  163 (219)
T PRK10847         97 GEKLFSNPNSKIFRRSYLDKTHQFYEKHGGKTIILARFVPIVR-TFAPFVAGMGHMSYRHFAAYNVIG  163 (219)
T ss_pred             CHHHhhccccccCCHHHHHHHHHHHHHcCCEEEEeeCCccchH-hHHHHHhHhcCCChHHHHHHHHHH
Confidence            99877532   12346789999999999999999999999765 789999999999999999999987

>COG0586 DedA Uncharacterized membrane-associated protein [Function unknown]

Probab=99.73  E-value=6.8e-17  Score=143.46  Aligned_cols=109  Identities=18%  Similarity=0.229  Sum_probs=99.7

Q ss_pred             hcccCChHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhc----CcHHHHHHHHHHhhcc
Q 024013          158 EILAIPAIPLTMSAGLL-----FGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVE----GNKKFLAIDKAIGENG  228 (274)
Q Consensus       158 ~~l~iP~~~L~iaaG~l-----FG~~~G~l~~~lG~~lGa~i~F~IgR~lGr~~v~~~l~----~~~kl~ri~~~l~r~G  228 (274)
                      ...++|++++++++|++     ++++..++.+++|+++|+.+.|++||++|++.+++..+    ++++++|.+++++|||
T Consensus        32 ~~~~lPge~iL~~~G~l~~~g~~~~~~~i~~~~lga~lGd~i~Y~iGr~~G~~~l~~~~~~~~~~~~~l~~a~~~f~r~G  111 (208)
T COG0586          32 VGPPLPGEVLLLLAGALAAQGKLNLWLVILVATLGALLGDLISYWIGRRFGRKLLRKLWSYRLLKRKKLDKAELLFERHG  111 (208)
T ss_pred             cCCCCCchHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHHHhhhhhccCCHHHHHHHHHHHHHcC
Confidence            45789999999999998     45778888999999999999999999999998887766    5688999999999999


Q ss_pred             hHhhhHHhhccccchhhhhHhhhccCCChhhHHHHHhhh
Q 024013          229 FRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGRYDY  267 (274)
Q Consensus       229 ~~~V~llRliPviP~~vvny~aGls~i~~~~Fll~tllG  267 (274)
                      .++++++|++|++ .+++.++||+++||+++|.+.+++|
T Consensus       112 ~~~vf~~RFip~v-Rt~ip~~AG~~~m~~~~F~~~n~~g  149 (208)
T COG0586         112 LFAIFLGRFIPGV-RTLVPIVAGMSKMPLRRFLLYNILG  149 (208)
T ss_pred             chhhhhhcccchh-HhhhhHhhhhccCChHHHHHHHHHH
Confidence            9999999999974 7999999999999999999999887

>COG1238 Predicted membrane protein [Function unknown]

Probab=99.41  E-value=4.1e-12  Score=108.91  Aligned_cols=131  Identities=17%  Similarity=0.312  Sum_probs=106.6

Q ss_pred             HHHHhhccHHHHHHHHHHHhhhcccCChHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhc-Cc
Q 024013          137 GFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLL-FGSVTGTIIVSISGTVAASVAFLIARYFARERILKLVE-GN  214 (274)
Q Consensus       137 ~~i~~~g~~g~lifvll~i~~~~l~iP~~~L~iaaG~l-FG~~~G~l~~~lG~~lGa~i~F~IgR~lGr~~v~~~l~-~~  214 (274)
                      ...+.+++++  +|+..++..+++|+|.+++.+..-.. +.++.-.+++++|+++|++++|++||+.++...++... ++
T Consensus        12 ~~~~~~a~~~--Lf~vaF~eat~lP~~sE~~l~~m~~~~~~~~~~~~vAt~gs~lG~~~~y~lG~~~~~~~~~~~~~~~~   89 (161)
T COG1238          12 LMSQAYAYAG--LFIVAFLEATLLPVPSEVLLAPMLLLGLNAWILALVATLGSVLGGLVNYALGRFLPEFIARRWFPGSE   89 (161)
T ss_pred             HHHHHHHHHH--HHHHHHHHHHhcCCChHHHHHHHHHcCCchHHHHHHHHHHhhHhHHHHHHHHhcchHHHHHHhhcchH
Confidence            3444556665  57777888889999988765555444 77888889999999999999999999998876665442 35


Q ss_pred             HHHHHHHH-HHhhcchHhhhHHhhccccchhhhhHhhhccCCChhhHHHHHhhhc-ccc
Q 024013          215 KKFLAIDK-AIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGRYDYY-PSY  271 (274)
Q Consensus       215 ~kl~ri~~-~l~r~G~~~V~llRliPviP~~vvny~aGls~i~~~~Fll~tllGi-P~~  271 (274)
                      ++.++.++ +.+|+|.+.+++.-+.| +| ++++.+||..++++..|++..++|. .+|
T Consensus        90 ~~~~~~~~~~~~ryg~~~ll~s~lp~-ig-d~~t~~aG~~~~~~~~f~~~~~igk~~Ry  146 (161)
T COG1238          90 EALEKLQEKWYRRYGVWTLLLSWLPP-IG-DVLTLLAGWLRLNFLPFILLVFLGKAARY  146 (161)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccc-cc-hHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence            67778776 88999999999999988 68 9999999999999999999999984 444

>KOG3140 consensus Predicted membrane protein [Function unknown]

Probab=99.39  E-value=1.1e-12  Score=121.11  Aligned_cols=134  Identities=29%  Similarity=0.490  Sum_probs=116.4

Q ss_pred             HHHHHHHHhhccHHHHHHHHHHHhhhcccCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Q 024013          133 TQFSGFIEGYGPAGYALFVAVYAGLEILAIPA-IPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIARYFARERILKLV  211 (274)
Q Consensus       133 ~~l~~~i~~~g~~g~lifvll~i~~~~l~iP~-~~L~iaaG~lFG~~~G~l~~~lG~~lGa~i~F~IgR~lGr~~v~~~l  211 (274)
                      +-+..+.+++.....+.|++.|+.....++|+ ..+.+.+|++||.|.|++++...+++|++++|.+++..||+.+.+++
T Consensus        83 ~vl~~y~~~~~a~~~~~~~~~y~f~qtfaipG~~fls~~aG~l~~~~~g~~Lv~~~~~~ga~~cy~lS~~f~r~~v~~l~  162 (275)
T KOG3140|consen   83 AVLRKYKATYFAAVLLGFIAAYVFLQTFAIPGSIFLSLLAGALFGVFKGVLLVCLLSTLGASLCYLLSKLFGRPLVLKLF  162 (275)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHhhccceEEeeeeeccchhHHHHHHHHHHHhHHHHHHHh
Confidence            45556677776677778898999888899995 68999999999999999999999999999999999999999999998


Q ss_pred             cCcHHHHHHHHHH--hhcc-hHhhhHHhhccccchhhhhHhhhccCCChhhHHHHHhhhc
Q 024013          212 EGNKKFLAIDKAI--GENG-FRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGRYDYY  268 (274)
Q Consensus       212 ~~~~kl~ri~~~l--~r~G-~~~V~llRliPviP~~vvny~aGls~i~~~~Fll~tllGi  268 (274)
                      .  ++.+.++..+  ++++ +.++++.|+.|..|+++.|+++++.+++++.|++++++|+
T Consensus       163 p--~~~~~~~~~~~~~~~~~~~~~~~lrlsp~~pnw~~n~~spvl~Vp~~~f~~~~~~gl  220 (275)
T KOG3140|consen  163 P--DKIAFLQQDVELNRNSLLNYMLFLRLSPFLPNWVINIVSPVLGVPLRIFFIGTFKGL  220 (275)
T ss_pred             H--HHHHHHHHHHHhcccchhhhhhhhhhccCCHHHHHHHHHHhhccchHHHHHHHHHhc
Confidence            8  4555554444  3556 5679999999999999999999999999999999999985

>PF06695 Sm_multidrug_ex: Putative small multi-drug export protein; InterPro: IPR009577 This family contains a small number of putative small multi-drug export proteins

Probab=96.23  E-value=0.055  Score=44.34  Aligned_cols=93  Identities=17%  Similarity=0.152  Sum_probs=66.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHhcC-cHHHHHHHHHHhhcchHhhhHHhhccccc---hhh
Q 024013          175 FGSVTGTIIVSISGTVAASVAFLIARYFARE-----RILKLVEG-NKKFLAIDKAIGENGFRVVTLLRLSPLLP---FSL  245 (274)
Q Consensus       175 FG~~~G~l~~~lG~~lGa~i~F~IgR~lGr~-----~v~~~l~~-~~kl~ri~~~l~r~G~~~V~llRliPviP---~~v  245 (274)
                      ++++..++++.+|+++.....++.-++.-+-     ..++..++ .++.++-++.++|+|++.+++.-.+| +|   .+.
T Consensus        14 l~p~~~~~~~~lGN~l~vp~i~~~~~~i~~~l~~~~~~~~~~~~~~~k~~~~~~~i~kyg~~GL~lFVaIP-lP~TG~wt   92 (121)
T PF06695_consen   14 LPPWEAFLLAFLGNILPVPFILLFLDKILKWLKRKPWLKKFYEWLEKKAEKKSKKIEKYGFWGLALFVAIP-LPGTGAWT   92 (121)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhCC-CCcchHHH
Confidence            4577888888888888776666666554321     12222211 13555677888999999888877777 46   456


Q ss_pred             hhHhhhccCCChhhHHHHHhhhc
Q 024013          246 GNYLYGLTSVKFVPYVLGRYDYY  268 (274)
Q Consensus       246 vny~aGls~i~~~~Fll~tllGi  268 (274)
                      -+++|-+.+|+.++=+++..+|.
T Consensus        93 gal~a~llg~~~~~~~~ai~~Gv  115 (121)
T PF06695_consen   93 GALIASLLGMDKKKAFLAIFLGV  115 (121)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHH
Confidence            78899999999999999988884

>PLN02953 phosphatidate cytidylyltransferase

Probab=92.77  E-value=2  Score=42.09  Aligned_cols=30  Identities=13%  Similarity=0.168  Sum_probs=18.0

Q ss_pred             CCCCCCcCchhHHHHHHHHHHHHHHHHHHH
Q 024013           89 AESEGLEGDTAVKGSILAGVLLLVVVGGFG  118 (274)
Q Consensus        89 ~~~~~~~~~~~~~~~ll~~v~lv~~v~~l~  118 (274)
                      +.++.+++.+..+++++..+++++++.+..
T Consensus        87 ~~~~~~~~~~~l~~RIiSglvl~~l~l~vV  116 (403)
T PLN02953         87 NVEDKQKKASQLKKRVIFGIGIGLPVGCVV  116 (403)
T ss_pred             cccccccccccHHHHHHHHHHHHHHHHhee
Confidence            334455666677777777766665554443

>PF06695 Sm_multidrug_ex: Putative small multi-drug export protein; InterPro: IPR009577 This family contains a small number of putative small multi-drug export proteins

Probab=89.55  E-value=2.3  Score=34.77  Aligned_cols=53  Identities=26%  Similarity=0.305  Sum_probs=35.7

Q ss_pred             HHHHHHHhhccHHHHHHHHHHHhhhcccCChH--HHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Q 024013          134 QFSGFIEGYGPAGYALFVAVYAGLEILAIPAI--PLTMSAGLLFG--SVTGTIIVSISGTVAAS  193 (274)
Q Consensus       134 ~l~~~i~~~g~~g~lifvll~i~~~~l~iP~~--~L~iaaG~lFG--~~~G~l~~~lG~~lGa~  193 (274)
                      .-+++++.+|.+|..+|+       .+|+|++  ..-.+++.++|  ....++...+|..+++.
T Consensus        64 ~~~~~i~kyg~~GL~lFV-------aIPlP~TG~wtgal~a~llg~~~~~~~~ai~~Gv~ia~~  120 (121)
T PF06695_consen   64 KKSKKIEKYGFWGLALFV-------AIPLPGTGAWTGALIASLLGMDKKKAFLAIFLGVLIAGV  120 (121)
T ss_pred             HHHHHHHHHhHHHHHHHH-------hCCCCcchHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHh
Confidence            355677888988877776       5688853  55566666766  35566666777766654

>COG0398 Uncharacterized conserved protein [Function unknown]

Probab=86.08  E-value=24  Score=31.85  Aligned_cols=81  Identities=15%  Similarity=0.172  Sum_probs=54.1

Q ss_pred             HHhHHHHHHHHHHHHHHHHhhccHH-HHHHHHHHHhhhcccCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024013          122 YVYKDQINAFLTQFSGFIEGYGPAG-YALFVAVYAGLEILAIPA-IPLTMSAGLLFGSVTGTIIVSISGTVAASVAFLIA  199 (274)
Q Consensus       122 ~~~~~~L~~~l~~l~~~i~~~g~~g-~lifvll~i~~~~l~iP~-~~L~iaaG~lFG~~~G~l~~~lG~~lGa~i~F~Ig  199 (274)
                      ..+.+.+.+|.++.-.|    ++.. .++..+...+......+. ..--.+-|...|.+...+-+++|+++.-.++=..+
T Consensus        32 ~~~~~~l~~~i~~~g~~----~pl~~fil~~l~~~~~~iP~~il~l~~g~ifG~~~G~~~s~~G~~~gs~~~Fll~R~~g  107 (223)
T COG0398          32 LLDPETLREWIQAYGAL----GPLVFFILLYLVATLPIIPGSILTLAGGLLFGPFLGFLYSLIGATAGSTLAFLLARYLG  107 (223)
T ss_pred             ccCHHHHHHHHHHcCch----HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            44455566555543333    3333 666666666555666563 34556678899999999888999999999998888


Q ss_pred             HHHhHHH
Q 024013          200 RYFARER  206 (274)
Q Consensus       200 R~lGr~~  206 (274)
                      |..-++.
T Consensus       108 r~~~~~~  114 (223)
T COG0398         108 RDWVLKF  114 (223)
T ss_pred             HHHHHHH
Confidence            8665443

>PRK13109 flhB flagellar biosynthesis protein FlhB; Reviewed

Probab=85.90  E-value=4.5  Score=39.18  Aligned_cols=12  Identities=8%  Similarity=-0.155  Sum_probs=4.6

Q ss_pred             HHHHHHHHHHHH
Q 024013          102 GSILAGVLLLVV  113 (274)
Q Consensus       102 ~~ll~~v~lv~~  113 (274)
                      +=+-..+.+++.
T Consensus        32 ~el~~~~~l~~~   43 (358)
T PRK13109         32 REAPVFASMLGL   43 (358)
T ss_pred             HhHHHHHHHHHH
Confidence            333333333333

>PRK01844 hypothetical protein; Provisional

Probab=83.30  E-value=3.5  Score=30.97  Aligned_cols=34  Identities=18%  Similarity=0.266  Sum_probs=25.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 024013          177 SVTGTIIVSISGTVAASVAFLIARYFARERILKL  210 (274)
Q Consensus       177 ~~~G~l~~~lG~~lGa~i~F~IgR~lGr~~v~~~  210 (274)
                      .|..+++..++..+|.+++|+++|+..++.+++-
T Consensus         3 ~~~~I~l~I~~li~G~~~Gff~ark~~~k~lk~N   36 (72)
T PRK01844          3 IWLGILVGVVALVAGVALGFFIARKYMMNYLQKN   36 (72)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence            3455666678888999999999999876655543

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00