Citrus Sinensis ID: 024104

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270--
Protein Sequence
MPKSRLNLLFLFFQLLTLQFLSIISAIRKDIGFQETPFCKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCPEKGEKFSCQGCNLLSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAYLSDFHHCFSMPSNASGAGVTQLEGRLSGISVIIGRQGESCDSVCKSSGQSCVLNKLILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAPSNLNPTACLYTRIQSMLSCDGSHRHTRRLCPCA
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEccccccccccccccccccccccccEEEcccccccccccccccHHHHccccccHHHHHHHHHHHccccccccccccHHHHHHHccccccccEEEccccccccccccccccccccccccccccccccEEEEEccccccHHHHHHHcccEEEcccccccccHHHHHHHcccccccccccccccccccccccccccccccEEEcccccccccccccccccEEcccc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHHHHccHHHHHHccccccccccccccccccEEEEccccEEEcHHHcccccccccccccEEEccccccccccccEEEEEEHccccccHHHHHHHHHHccccccHHccccccHHHHHHEEccccccEEEcccccccccHcccccccccccccccccccccccEEEEccccccHHHHHHHccccccccHHHHHcHHHHHHHHcccccccccccccccccEEHcccccccccccEEEEccccEEcccccccccEEccccc
Coil and Loop (DISEMBL)
MPKSRLNLLFLFFQLLTLQFLSIISAIRKdigfqetpfckttvqgryllsddngyvcdavsmdpqsrccpekgekfscqgcnllsqccnsyeycvsccvnpartLKEQVLNVkiakpttagtygsvfdfcagrcrhnsesvvhenaylsdfhhcfsmpsnasgagvtqlegRLSGISVIIgrqgescdsvckssgqscvlnkLILLNQCEIIQKYMSCkrgclasmgadqpaevaddapsnlnptACLYTRIQSmlscdgshrhtrrlcpca
Flexible Loop (DISEMBL)
MPKSRLNLLFLFFQLLTLQFLSIISAIRKDIGFQETPFCKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCPEKGEKFSCQGCNLLSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAYLSDFHHCFSMPSNASGAGVTQLEGRLSGISVIIGRQGESCDSVCKSSGQSCVLNKLILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAPSNLNPTACLYTRIQSMlscdgshrhtrrlcpca
Low Complexity Region (SEG)
MPKSRlnllflffqlltlqflSIISAIRKDIGFQETPFCKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCPEKGEKFSCQGCNLLSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAYLSDFHHCFSMPSNASGAGVTQLEGRLSGISVIIGRQGESCDSVCKSSGQSCVLNKLILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAPSNLNPTACLYTRIQSMLSCDGSHRHTRRLCPCA
Disordered region (IsUnstruct)
*****LNLLFLFFQLLTLQFLSIISAIRKDIGFQETPFCKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCPEKGEKFSCQGCNLLSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAYLSDFHHCFSMPSNASGAGVTQLEGRLSGISVIIGRQGESCDSVCKSSGQSCVLNKLILLNQCEIIQKYMSCKRGCLASM*****************PTACLYTRIQSMLSC**************
Disordered Region (DISOPRED)
****RLN*LFLFFQLLTLQFLSIISAIRK*******PFCKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCPEKGEKFSCQGCNLLSQCCNSYEYCVSCCVNPARTLKEQVLN**IA*PTTAGTYGSVFDFCAGRCRHNSESVVHENAYLSDFHHCFSMPSN****GVTQLEGRLSGISVIIGRQGESCDSVCKSSGQSCVLNKLILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAPSNLNPTACLYTRIQSMLSCDGSHRHTRRLCPCA
Disordered Region (DISEMBL)
MPKSRLNLLFLFFQLLTLQFLSIISAIRKDIGFQETPFCKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCPEKGEKFSCQGCNLLSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAYLSDFHHCFSMPSNASGAGVTQLEGRLSGISVIIGRQ***********GQSCVLNKLILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAPSNLNPTACLYTRIQSMLSCDG************
Disordered Region (DISPRO)
***SRLNLLFLFFQLLTLQFLSIISAIRKDIGFQETPFCKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCPEKGEKFSCQGCNLLSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAYLSDFHHCFSMP**************LSGISVIIGRQGESCDSVCKSSGQSCVLNKLILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAPSNLNPTACLYTRIQSMLSCDGSHRHTRRLCPCA
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPKSRLNLLFLFFQLLTLQFLSIISAIRKDIGFQETPFCKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCPEKGEKFSCQGCNLLSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAYLSDFHHCFSMPSNASGAGVTQLEGRLSGISVIIGRQGESCDSVCKSSGQSCVLNKLILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAPSNLNPTACLYTRIQSMLSCDGSHRHTRRLCPCA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	272	2.2.26 [Sep-21-2011]
Q8BTG6	205	UPF0454 protein C12orf49	yes	no	0.393	0.521	0.385	7e-13
Q6GNT2	205	UPF0454 protein C12orf49	N/A	no	0.422	0.560	0.357	2e-12
Q17QN8	205	UPF0454 protein C12orf49	yes	no	0.393	0.521	0.377	4e-12
Q9H741	205	UPF0454 protein C12orf49	yes	no	0.393	0.521	0.359	2e-11
Q5ZJE4	205	UPF0454 protein C12orf49	yes	no	0.393	0.521	0.368	5e-11
Q503V3	199	UPF0454 protein C12orf49	yes	no	0.386	0.527	0.370	1e-10

>sp|Q8BTG6|CL049_MOUSE UPF0454 protein C12orf49 homolog OS=Mus musculus PE=2 SV=1

 Score = 74.7 bits (182), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 7/114 (6%)

Query: 39  CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCP---EKGEKFSCQGCNLLSQCCNSYEYCV 95
           C+ +VQG++LL+D+ GYVC+   +     CC       +++ C GC L + CC +YEYCV
Sbjct: 75  CRNSVQGKHLLTDELGYVCERKDLLANG-CCDVSVPSTKQYCCDGC-LANGCCEAYEYCV 132

Query: 96  SCCVNPART-LKEQVLN-VKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAY 147
           SCC+ P++  L E+ LN   +A           F+ C  +CR +S+SV HEN Y
Sbjct: 133 SCCLQPSKQLLLERFLNRAAVAFQNLFMAVEDHFELCLAKCRTSSQSVQHENTY 186

Mus musculus (taxid: 10090)

>sp|Q6GNT2|CL049_XENLA UPF0454 protein C12orf49 homolog OS=Xenopus laevis PE=2 SV=1

 Score = 73.2 bits (178), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 8/123 (6%)

Query: 39  CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCP---EKGEKFSCQGCNLLSQCCNSYEYCV 95
           C+ +VQG+ L++DD GY+C+   +     CC       + +SC+ C L + CC+ YE+CV
Sbjct: 75  CRNSVQGKLLVTDDMGYICERKELLANG-CCNINVASTKLYSCETC-LPNGCCSVYEFCV 132

Query: 96  SCCVNPARTLK-EQVLN-VKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAYLSDF-H 152
           SCC+ P + L+ E+ LN   +A           F+ C  +CR +S+SV HEN Y +    
Sbjct: 133 SCCLQPNKQLQLERFLNKAAVAFQNLFQAVEDHFELCLAKCRTSSQSVQHENTYRNPIAK 192

Query: 153 HCF 155
           HC+
Sbjct: 193 HCY 195

Xenopus laevis (taxid: 8355)

>sp|Q17QN8|CL049_BOVIN UPF0454 protein C12orf49 homolog OS=Bos taurus PE=2 SV=1

 Score = 72.4 bits (176), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 7/114 (6%)

Query: 39  CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCPEK---GEKFSCQGCNLLSQCCNSYEYCV 95
           C+ ++QG++L++D+ GYVC+   +     CC       +++ C GC L S CC++YEYCV
Sbjct: 75  CRNSIQGKHLITDELGYVCERRDLLVNG-CCNVNVPGTKQYCCDGC-LSSGCCSAYEYCV 132

Query: 96  SCCVNPART-LKEQVLN-VKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAY 147
           SCC+ P +  L E+ LN   +A           F+ C  +CR +S+SV HEN Y
Sbjct: 133 SCCLQPNKQLLLERFLNRAAVAFQNLFMAVEDHFELCLAKCRTSSQSVQHENTY 186

Bos taurus (taxid: 9913)

>sp|Q9H741|CL049_HUMAN UPF0454 protein C12orf49 OS=Homo sapiens GN=C12orf49 PE=2 SV=1

 Score = 70.1 bits (170), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 7/114 (6%)

Query: 39  CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCP---EKGEKFSCQGCNLLSQCCNSYEYCV 95
           C+ ++QG++L++D+ GYVC+   +     CC       +++ C GC   + CC++YEYCV
Sbjct: 75  CRNSIQGKHLITDELGYVCERKDLLVNG-CCNVNVPSTKQYCCDGC-WPNGCCSAYEYCV 132

Query: 96  SCCVNPART-LKEQVLN-VKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAY 147
           SCC+ P +  L E+ LN   +A           F+ C  +CR +S+SV HEN Y
Sbjct: 133 SCCLQPNKQLLLERFLNRAAVAFQNLFMAVEDHFELCLAKCRTSSQSVQHENTY 186

Homo sapiens (taxid: 9606)

>sp|Q5ZJE4|CL049_CHICK UPF0454 protein C12orf49 homolog OS=Gallus gallus GN=RCJMB04_18o22 PE=2 SV=1

 Score = 68.6 bits (166), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 7/114 (6%)

Query: 39  CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCC---PEKGEKFSCQGCNLLSQCCNSYEYCV 95
           C+ +VQG+ L++D+ GY+C+   +     CC       + +SC  C L + CC+ YEYCV
Sbjct: 75  CRNSVQGKLLITDELGYICERKDLLVNG-CCNVNVPSTKLYSCDSC-LPNGCCSVYEYCV 132

Query: 96  SCCVNPART-LKEQVLN-VKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAY 147
           SCC+ P++  L E+ LN   +A           F+ C  +CR +S+SV HEN Y
Sbjct: 133 SCCLQPSKQHLLERFLNRAAMAFQNLFMAVEDRFELCLAKCRTSSQSVQHENTY 186

Gallus gallus (taxid: 9031)

>sp|Q503V3|CL049_DANRE UPF0454 protein C12orf49 homolog OS=Danio rerio GN=zgc:110063 PE=2 SV=1

 Score = 67.0 bits (162), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 11/116 (9%)

Query: 39  CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCC---PEKGEKFSCQGCNLLSQCCNSYEYCV 95
           C+ ++QG+ LL+D+ GYVC+   +     CC        ++ C+ C L + CC+ YEYCV
Sbjct: 69  CRNSIQGKSLLTDELGYVCERKDLLVNG-CCNVNAPSSSQYVCKSC-LSNGCCSIYEYCV 126

Query: 96  SCCVNPART-LKEQVLNVKIAKPTTAGTYGSV---FDFCAGRCRHNSESVVHENAY 147
           SCC+ P +  L E+ LN   A       + +V   F+ C  +CR +S+SV HEN Y
Sbjct: 127 SCCLQPDKQPLLERFLNR--AAEGFQNLFTAVEDHFELCLAKCRTSSQSVQHENTY 180

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
118485488	268	unknown [Populus trichocarpa]	0.963	0.977	0.775	1e-117
297743774	273	unnamed protein product [Vitis vinifera]	1.0	0.996	0.728	1e-112
359478124	279	PREDICTED: UPF0454 protein C12orf49 homo	1.0	0.974	0.728	1e-112
224112759	245	predicted protein [Populus trichocarpa]	0.900	1.0	0.779	1e-111
356538903	281	PREDICTED: uncharacterized protein LOC10	0.948	0.918	0.744	1e-111
297817236	272	hypothetical protein ARALYDRAFT_486406 [	1.0	1.0	0.698	1e-106
388496984	272	unknown [Lotus japonicus]	0.933	0.933	0.721	1e-106
255585501	251	conserved hypothetical protein [Ricinus	0.889	0.964	0.739	1e-104
30694985	273	uncharacterized protein [Arabidopsis tha	0.948	0.945	0.709	1e-103
242084782	276	hypothetical protein SORBIDRAFT_08g00331	0.930	0.916	0.644	2e-95

>gi|118485488|gb|ABK94599.1| unknown [Populus trichocarpa]

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 204/263 (77%), Positives = 234/263 (88%), Gaps = 1/263 (0%)

Query: 11  LFFQLLTL-QFLSIISAIRKDIGFQETPFCKTTVQGRYLLSDDNGYVCDAVSMDPQSRCC 69
           L  QLL L QF SIISAIRKDIGF+++  C+ TVQGRYLLSDDNGYVCDA+S+DP SRCC
Sbjct: 6   LSLQLLILFQFSSIISAIRKDIGFEQSRSCRNTVQGRYLLSDDNGYVCDALSVDPPSRCC 65

Query: 70  PEKGEKFSCQGCNLLSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTAGTYGSVFDF 129
           PE G +FSCQGCNL+SQCCNSYE+CVSCC++P+RT + QVL VKIAKP+TA +Y SVFDF
Sbjct: 66  PENGLRFSCQGCNLVSQCCNSYEFCVSCCLHPSRTQEAQVLKVKIAKPSTAVSYTSVFDF 125

Query: 130 CAGRCRHNSESVVHENAYLSDFHHCFSMPSNASGAGVTQLEGRLSGISVIIGRQGESCDS 189
           CAGRCRHNSESVVHENAY SDFHHCFS+PSN+SGA  TQLE RL GI+V+IG+QGESCDS
Sbjct: 126 CAGRCRHNSESVVHENAYRSDFHHCFSLPSNSSGANYTQLEARLGGINVVIGKQGESCDS 185

Query: 190 VCKSSGQSCVLNKLILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAPSNLNPTACLY 249
           VCKS+GQSCVLNKL++LNQC+++QKYMSCK GCLAS+G DQPAEV +DAP +LNP ACLY
Sbjct: 186 VCKSNGQSCVLNKLLVLNQCDVMQKYMSCKGGCLASIGTDQPAEVVEDAPRHLNPGACLY 245

Query: 250 TRIQSMLSCDGSHRHTRRLCPCA 272
           TR QS+LSCDGS  HTRRLCPCA
Sbjct: 246 TRTQSLLSCDGSLWHTRRLCPCA 268

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297743774|emb|CBI36657.3| unnamed protein product [Vitis vinifera]

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 199/273 (72%), Positives = 227/273 (83%), Gaps = 1/273 (0%)

Query: 1   MPKSRLNLLFLFFQLLTLQFLSIISAIRKDIGFQETPFCKTTVQGRYLLSDDNGYVCDAV 60
           M  SRL L  LF  +L +Q LS +SAIRKD    E   C+TTVQGRYL +DDNG+VCDA+
Sbjct: 1   MSNSRLILSLLFRFILIIQILSRVSAIRKDPNLLEKRICRTTVQGRYLRTDDNGHVCDAL 60

Query: 61  SMDPQSRCCPEKGEKFSCQGCNLLSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTA 120
           SMDPQS CC  K E+FSC GCNL+SQCCNSYE+CVSCC+NPART KE  L VK+AKP TA
Sbjct: 61  SMDPQSGCCFGKREQFSCHGCNLISQCCNSYEFCVSCCLNPARTQKELALKVKMAKPVTA 120

Query: 121 GTYGSVFDFCAGRCRHNSESVVHENAYLSDFHHCFSMPSNASGAGVTQ-LEGRLSGISVI 179
           G Y SVFDFC GRCRHNSESVVHENAYLSDFHHCFS+PSN++  GV +  E RL+GI V+
Sbjct: 121 GAYASVFDFCTGRCRHNSESVVHENAYLSDFHHCFSLPSNSTAGGVDRNPELRLNGIHVV 180

Query: 180 IGRQGESCDSVCKSSGQSCVLNKLILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAP 239
           +GRQGESCDSVCKS+GQSCV +KL +LNQCEI+QKYMSCK  CLAS+GADQPAEV DDAP
Sbjct: 181 VGRQGESCDSVCKSNGQSCVPSKLSVLNQCEIMQKYMSCKGACLASIGADQPAEVVDDAP 240

Query: 240 SNLNPTACLYTRIQSMLSCDGSHRHTRRLCPCA 272
            +LNP ACLYTR Q++LSCDGSH+HTRRLCPCA
Sbjct: 241 RHLNPGACLYTRTQTILSCDGSHQHTRRLCPCA 273

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478124|ref|XP_002264803.2| PREDICTED: UPF0454 protein C12orf49 homolog [Vitis vinifera]

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 199/273 (72%), Positives = 227/273 (83%), Gaps = 1/273 (0%)

Query: 1   MPKSRLNLLFLFFQLLTLQFLSIISAIRKDIGFQETPFCKTTVQGRYLLSDDNGYVCDAV 60
           M  SRL L  LF  +L +Q LS +SAIRKD    E   C+TTVQGRYL +DDNG+VCDA+
Sbjct: 7   MSNSRLILSLLFRFILIIQILSRVSAIRKDPNLLEKRICRTTVQGRYLRTDDNGHVCDAL 66

Query: 61  SMDPQSRCCPEKGEKFSCQGCNLLSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTA 120
           SMDPQS CC  K E+FSC GCNL+SQCCNSYE+CVSCC+NPART KE  L VK+AKP TA
Sbjct: 67  SMDPQSGCCFGKREQFSCHGCNLISQCCNSYEFCVSCCLNPARTQKELALKVKMAKPVTA 126

Query: 121 GTYGSVFDFCAGRCRHNSESVVHENAYLSDFHHCFSMPSNASGAGVTQ-LEGRLSGISVI 179
           G Y SVFDFC GRCRHNSESVVHENAYLSDFHHCFS+PSN++  GV +  E RL+GI V+
Sbjct: 127 GAYASVFDFCTGRCRHNSESVVHENAYLSDFHHCFSLPSNSTAGGVDRNPELRLNGIHVV 186

Query: 180 IGRQGESCDSVCKSSGQSCVLNKLILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAP 239
           +GRQGESCDSVCKS+GQSCV +KL +LNQCEI+QKYMSCK  CLAS+GADQPAEV DDAP
Sbjct: 187 VGRQGESCDSVCKSNGQSCVPSKLSVLNQCEIMQKYMSCKGACLASIGADQPAEVVDDAP 246

Query: 240 SNLNPTACLYTRIQSMLSCDGSHRHTRRLCPCA 272
            +LNP ACLYTR Q++LSCDGSH+HTRRLCPCA
Sbjct: 247 RHLNPGACLYTRTQTILSCDGSHQHTRRLCPCA 279

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112759|ref|XP_002332721.1| predicted protein [Populus trichocarpa] gi|222832884|gb|EEE71361.1| predicted protein [Populus trichocarpa]

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/245 (77%), Positives = 221/245 (90%)

Query: 28  RKDIGFQETPFCKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCPEKGEKFSCQGCNLLSQC 87
           RKDIGF+++  C+ TVQGRYLLSDDNGYVCDA+S+DP SRCCPE G +FSCQGCNL+SQC
Sbjct: 1   RKDIGFEQSRSCRNTVQGRYLLSDDNGYVCDALSVDPPSRCCPENGLRFSCQGCNLVSQC 60

Query: 88  CNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAY 147
           CNSYE+CVSCC++P+RT + QVL VKIAKP+TA +Y SVFDFCAGRCRHNSESVVHENAY
Sbjct: 61  CNSYEFCVSCCLHPSRTQEAQVLKVKIAKPSTAVSYTSVFDFCAGRCRHNSESVVHENAY 120

Query: 148 LSDFHHCFSMPSNASGAGVTQLEGRLSGISVIIGRQGESCDSVCKSSGQSCVLNKLILLN 207
            SDFHHCFS+PSN+SGA  TQLE RL GI+V+IG+QGESCDSVCKS+GQSCVLNKL++LN
Sbjct: 121 RSDFHHCFSLPSNSSGANYTQLEARLGGINVVIGKQGESCDSVCKSNGQSCVLNKLLVLN 180

Query: 208 QCEIIQKYMSCKRGCLASMGADQPAEVADDAPSNLNPTACLYTRIQSMLSCDGSHRHTRR 267
           QC+++QKYMSCK GCLAS+G DQPAEV +DAP +LNP ACLYTR QS+LSCDGS  HTRR
Sbjct: 181 QCDVMQKYMSCKGGCLASIGTDQPAEVVEDAPRHLNPGACLYTRTQSLLSCDGSLWHTRR 240

Query: 268 LCPCA 272
           LCPCA
Sbjct: 241 LCPCA 245

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356538903|ref|XP_003537940.1| PREDICTED: uncharacterized protein LOC100782588 [Glycine max]

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 192/258 (74%), Positives = 221/258 (85%)

Query: 15  LLTLQFLSIISAIRKDIGFQETPFCKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCPEKGE 74
           L+   F S I+AIRKD+GFQ    CKTTVQGRYLLSDDNGYVC+A S++ +SRCCP++GE
Sbjct: 24  LVIFHFSSTITAIRKDVGFQIIHPCKTTVQGRYLLSDDNGYVCNAASVNSRSRCCPQRGE 83

Query: 75  KFSCQGCNLLSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTAGTYGSVFDFCAGRC 134
           KFSC GCNLLSQCCNSYEYCVSCC+NPA   KEQVL +K+AKPTTA TY SVFD+CAGRC
Sbjct: 84  KFSCHGCNLLSQCCNSYEYCVSCCLNPALISKEQVLKMKVAKPTTARTYSSVFDYCAGRC 143

Query: 135 RHNSESVVHENAYLSDFHHCFSMPSNASGAGVTQLEGRLSGISVIIGRQGESCDSVCKSS 194
           RH+SESVVHENAY+SDFHHCFS+ SN+SG   T  E RLSGI+V++GRQGESC+SVCKS 
Sbjct: 144 RHSSESVVHENAYISDFHHCFSLSSNSSGKNSTLTEARLSGINVVVGRQGESCNSVCKSR 203

Query: 195 GQSCVLNKLILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAPSNLNPTACLYTRIQS 254
           GQSCV NKL++LN C+IIQKYMSCK  CLAS+GADQPAEV  DAP +LNP +CLYT  QS
Sbjct: 204 GQSCVPNKLVVLNSCDIIQKYMSCKGSCLASVGADQPAEVVYDAPVHLNPGSCLYTETQS 263

Query: 255 MLSCDGSHRHTRRLCPCA 272
           +LSCDG H+HTRRLCPCA
Sbjct: 264 ILSCDGLHQHTRRLCPCA 281

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817236|ref|XP_002876501.1| hypothetical protein ARALYDRAFT_486406 [Arabidopsis lyrata subsp. lyrata] gi|297322339|gb|EFH52760.1| hypothetical protein ARALYDRAFT_486406 [Arabidopsis lyrata subsp. lyrata]

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 190/272 (69%), Positives = 224/272 (82%)

Query: 1   MPKSRLNLLFLFFQLLTLQFLSIISAIRKDIGFQETPFCKTTVQGRYLLSDDNGYVCDAV 60
           M  S  +L      L+   F   +SAIRKDIGF E   C+TTVQGRYL+SDD G VCD +
Sbjct: 1   MSTSGFSLFLAVLHLMGFLFPLRVSAIRKDIGFLEERSCRTTVQGRYLISDDEGNVCDVL 60

Query: 61  SMDPQSRCCPEKGEKFSCQGCNLLSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTA 120
           S++ ++RCCP KGE+FSC GCNLLSQCCNSYE+CVSCC+NP+RTL E+V+ VK+AKP TA
Sbjct: 61  SLESRTRCCPWKGERFSCHGCNLLSQCCNSYEFCVSCCLNPSRTLLEKVVKVKVAKPATA 120

Query: 121 GTYGSVFDFCAGRCRHNSESVVHENAYLSDFHHCFSMPSNASGAGVTQLEGRLSGISVII 180
           GTY SVFDFCAGRCRHNSESVVHENAY S+FHHCFS+ SNASGA +TQ+E RL GI VI+
Sbjct: 121 GTYKSVFDFCAGRCRHNSESVVHENAYHSEFHHCFSLTSNASGANLTQVETRLLGIDVIV 180

Query: 181 GRQGESCDSVCKSSGQSCVLNKLILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAPS 240
           G QG+SCD+VCKS GQ CV+NKL LLNQC+++++YM+CK  CLAS GADQPAEV +DAP 
Sbjct: 181 GSQGDSCDAVCKSRGQLCVMNKLSLLNQCDVMKRYMTCKGSCLASAGADQPAEVVEDAPR 240

Query: 241 NLNPTACLYTRIQSMLSCDGSHRHTRRLCPCA 272
           +L P ACLYTR QSMLSCDGSH+HTRRLCPCA
Sbjct: 241 DLYPGACLYTRTQSMLSCDGSHQHTRRLCPCA 272

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388496984|gb|AFK36558.1| unknown [Lotus japonicus]

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/255 (72%), Positives = 214/255 (83%), Gaps = 1/255 (0%)

Query: 19  QFLSIISAIRKDIGFQET-PFCKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCPEKGEKFS 77
            F S I+AIRKDIG Q   P CKTTVQGRY L+DDNG+VC A+S+D  SRCCP+  EKFS
Sbjct: 18  HFSSPITAIRKDIGLQSIIPTCKTTVQGRYHLTDDNGFVCSALSVDSMSRCCPQSREKFS 77

Query: 78  CQGCNLLSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTAGTYGSVFDFCAGRCRHN 137
           C GCN+LSQCCNSYEYCVSCC+NPA T KEQVL +KI+KP TA TY +VFD+CA RCRH+
Sbjct: 78  CHGCNVLSQCCNSYEYCVSCCLNPALTSKEQVLKMKISKPVTARTYENVFDYCAARCRHS 137

Query: 138 SESVVHENAYLSDFHHCFSMPSNASGAGVTQLEGRLSGISVIIGRQGESCDSVCKSSGQS 197
           SESVVHENAYLSDFHHCFS+PSN+SG  VT  E RL+GI+V++GRQGESC SVCK  GQS
Sbjct: 138 SESVVHENAYLSDFHHCFSLPSNSSGTNVTLTEARLNGINVVVGRQGESCSSVCKLRGQS 197

Query: 198 CVLNKLILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAPSNLNPTACLYTRIQSMLS 257
           CV NKL++LN C+IIQ+YMSCK  CLAS+G DQPAEV  DAP +LNP +CLYT  +S+LS
Sbjct: 198 CVPNKLVVLNNCDIIQRYMSCKGSCLASVGTDQPAEVVYDAPKDLNPGSCLYTETESVLS 257

Query: 258 CDGSHRHTRRLCPCA 272
           CDGSH+HT+RLCPCA
Sbjct: 258 CDGSHQHTKRLCPCA 272

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585501|ref|XP_002533442.1| conserved hypothetical protein [Ricinus communis] gi|223526704|gb|EEF28938.1| conserved hypothetical protein [Ricinus communis]

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 179/242 (73%), Positives = 206/242 (85%)

Query: 1   MPKSRLNLLFLFFQLLTLQFLSIISAIRKDIGFQETPFCKTTVQGRYLLSDDNGYVCDAV 60
           M K  LN   + F L  LQFL +I +IR+DIGF E   C+TTVQGR+LLSDDNG+VCDA+
Sbjct: 4   MSKFGLNAPCILFPLFILQFLPVIFSIRRDIGFHEMKICRTTVQGRFLLSDDNGHVCDAL 63

Query: 61  SMDPQSRCCPEKGEKFSCQGCNLLSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTA 120
           S+DPQSRCCP +GEKFSC GCNLLS CCNSYE+CVSCC+NPART +E+V+ +KIAKP TA
Sbjct: 64  SLDPQSRCCPVRGEKFSCHGCNLLSHCCNSYEFCVSCCLNPARTQEEEVMKLKIAKPATA 123

Query: 121 GTYGSVFDFCAGRCRHNSESVVHENAYLSDFHHCFSMPSNASGAGVTQLEGRLSGISVII 180
           GTY S FDFCAGRCRHNSESVVHENAYLSDFHHCFS+PSN++GA   QLE RL GI+VII
Sbjct: 124 GTYTSTFDFCAGRCRHNSESVVHENAYLSDFHHCFSLPSNSTGANYRQLEARLVGINVII 183

Query: 181 GRQGESCDSVCKSSGQSCVLNKLILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAPS 240
           GRQGESCDS CKS+GQSCVLNKL++LNQC+I+QKYMSC+  CLASMG DQPAEV D AP 
Sbjct: 184 GRQGESCDSACKSNGQSCVLNKLLVLNQCDIMQKYMSCRGACLASMGTDQPAEVVDIAPK 243

Query: 241 NL 242
           +L
Sbjct: 244 HL 245

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30694985|ref|NP_191498.2| uncharacterized protein [Arabidopsis thaliana] gi|42572729|ref|NP_974460.1| uncharacterized protein [Arabidopsis thaliana] gi|332646394|gb|AEE79915.1| uncharacterized protein [Arabidopsis thaliana] gi|332646395|gb|AEE79916.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 183/258 (70%), Positives = 221/258 (85%)

Query: 15  LLTLQFLSIISAIRKDIGFQETPFCKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCPEKGE 74
           ++   F   +SAIRKDIGF E   C+TTVQGRYL+SDD G VCDA+S++ ++RCCP KGE
Sbjct: 16  IMGFLFPLRVSAIRKDIGFLEERSCRTTVQGRYLISDDEGNVCDALSLESRTRCCPWKGE 75

Query: 75  KFSCQGCNLLSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTAGTYGSVFDFCAGRC 134
           +FSC GCN+LSQCCNSYE+CVSCC+NP++TL E+V+ VK+AKP T+GTY SVFDFCAGRC
Sbjct: 76  RFSCHGCNILSQCCNSYEFCVSCCLNPSQTLLEKVVKVKVAKPATSGTYKSVFDFCAGRC 135

Query: 135 RHNSESVVHENAYLSDFHHCFSMPSNASGAGVTQLEGRLSGISVIIGRQGESCDSVCKSS 194
           RHNSESVVHENAY S+FHHCFS+ SNASGA +TQ+E RL GI VI+G QG+SCD+VCKS 
Sbjct: 136 RHNSESVVHENAYHSEFHHCFSLTSNASGANLTQVETRLLGIDVIVGSQGDSCDAVCKSR 195

Query: 195 GQSCVLNKLILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAPSNLNPTACLYTRIQS 254
           GQ CV+NKL LLNQC+++++YM+CK  CLAS GADQPAEV +DAP +L P ACLYTR QS
Sbjct: 196 GQLCVMNKLSLLNQCDVMKRYMNCKGSCLASAGADQPAEVVEDAPRDLYPGACLYTRTQS 255

Query: 255 MLSCDGSHRHTRRLCPCA 272
           +LSCDGSH+HTRRLCPCA
Sbjct: 256 LLSCDGSHQHTRRLCPCA 273

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242084782|ref|XP_002442816.1| hypothetical protein SORBIDRAFT_08g003310 [Sorghum bicolor] gi|241943509|gb|EES16654.1| hypothetical protein SORBIDRAFT_08g003310 [Sorghum bicolor]

 Score =  354 bits (909), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 163/253 (64%), Positives = 203/253 (80%)

Query: 20  FLSIISAIRKDIGFQETPFCKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCPEKGEKFSCQ 79
           F + +S IRKDIGF E   C++TVQGR+L+SDDNGYVC A+S++P S CCP  G++FSCQ
Sbjct: 24  FPNPVSGIRKDIGFIEPIVCRSTVQGRHLISDDNGYVCSALSINPWSHCCPTTGDRFSCQ 83

Query: 80  GCNLLSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTAGTYGSVFDFCAGRCRHNSE 139
           GC L  QCCNSYEYCVSCC+NP++  KE VL +K+AKP TAGTY +VFDFC GRCRH+S 
Sbjct: 84  GCKLDLQCCNSYEYCVSCCLNPSKIKKEDVLKLKVAKPVTAGTYTNVFDFCMGRCRHSSA 143

Query: 140 SVVHENAYLSDFHHCFSMPSNASGAGVTQLEGRLSGISVIIGRQGESCDSVCKSSGQSCV 199
           SVVHENAY SDFHHCFS+  N+SG+  + +  +L GI+V++GR GESC  VCK  GQSCV
Sbjct: 144 SVVHENAYASDFHHCFSVQQNSSGSTESSVVSKLLGINVVVGRPGESCSLVCKVRGQSCV 203

Query: 200 LNKLILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAPSNLNPTACLYTRIQSMLSCD 259
            ++L +LN+CEI+QKYM CK GC  S+G DQPAEV D+AP++LNP ACLY ++   L+CD
Sbjct: 204 PSRLSVLNKCEILQKYMRCKSGCFPSLGPDQPAEVVDEAPTSLNPGACLYMQMDERLTCD 263

Query: 260 GSHRHTRRLCPCA 272
           GSH+HTRRLCPCA
Sbjct: 264 GSHQHTRRLCPCA 276

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
TAIR|locus:2081192	273	AT3G59390 "AT3G59390" [Arabido	0.915	0.912	0.730	1.1e-105
MGI|MGI:1924042	205	2410131K14Rik "RIKEN cDNA 2410	0.422	0.560	0.365	2.2e-18
UNIPROTKB|Q17QN8	205	Q17QN8 "UPF0454 protein C12orf	0.422	0.560	0.373	5.8e-18
UNIPROTKB|Q9H741	205	C12orf49 "UPF0454 protein C12o	0.422	0.560	0.341	8.6e-17
UNIPROTKB|Q5ZJE4	205	RCJMB04_18o22 "UPF0454 protein	0.422	0.560	0.349	1.8e-16
ZFIN|ZDB-GENE-050522-367	199	zgc:110063 "zgc:110063" [Danio	0.415	0.567	0.352	6e-16

TAIR|locus:2081192 AT3G59390 "AT3G59390" [Arabidopsis thaliana (taxid:3702)]

 Score = 1046 (373.3 bits), Expect = 1.1e-105, P = 1.1e-105
 Identities = 182/249 (73%), Positives = 218/249 (87%)

Query:    24 ISAIRKDIGFQETPFCKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCPEKGEKFSCQGCNL 83
             +SAIRKDIGF E   C+TTVQGRYL+SDD G VCDA+S++ ++RCCP KGE+FSC GCN+
Sbjct:    25 VSAIRKDIGFLEERSCRTTVQGRYLISDDEGNVCDALSLESRTRCCPWKGERFSCHGCNI 84

Query:    84 LSQCCNSYEYCVSCCVNPARTLKEQVLNVKIAKPTTAGTYGSVFDFCAGRCRHNSESVVH 143
             LSQCCNSYE+CVSCC+NP++TL E+V+ VK+AKP T+GTY SVFDFCAGRCRHNSESVVH
Sbjct:    85 LSQCCNSYEFCVSCCLNPSQTLLEKVVKVKVAKPATSGTYKSVFDFCAGRCRHNSESVVH 144

Query:   144 ENAYLSDFHHCFSMPSNASGAGVTQLEGRLSGISVIIGRQGESCDSVCKSSGQSCVLNKL 203
             ENAY S+FHHCFS+ SNASGA +TQ+E RL GI VI+G QG+SCD+VCKS GQ CV+NKL
Sbjct:   145 ENAYHSEFHHCFSLTSNASGANLTQVETRLLGIDVIVGSQGDSCDAVCKSRGQLCVMNKL 204

Query:   204 ILLNQCEIIQKYMSCKRGCLASMGADQPAEVADDAPSNLNPTACLYTRIQSMLSCDGSHR 263
              LLNQC+++++YM+CK  CLAS GADQPAEV +DAP +L P ACLYTR QS+LSCDGSH+
Sbjct:   205 SLLNQCDVMKRYMNCKGSCLASAGADQPAEVVEDAPRDLYPGACLYTRTQSLLSCDGSHQ 264

Query:   264 HTRRLCPCA 272
             HTRRLCPCA
Sbjct:   265 HTRRLCPCA 273

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

MGI|MGI:1924042 2410131K14Rik "RIKEN cDNA 2410131K14 gene" [Mus musculus (taxid:10090)]

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 45/123 (36%), Positives = 69/123 (56%)

Query:    39 CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCP---EKGEKFSCQGCNLLSQCCNSYEYCV 95
             C+ +VQG++LL+D+ GYVC+   +     CC       +++ C GC L + CC +YEYCV
Sbjct:    75 CRNSVQGKHLLTDELGYVCERKDLLANG-CCDVSVPSTKQYCCDGC-LANGCCEAYEYCV 132

Query:    96 SCCVNPARTLK-EQVLN-VKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAYLSDF-H 152
             SCC+ P++ L  E+ LN   +A           F+ C  +CR +S+SV HEN Y      
Sbjct:   133 SCCLQPSKQLLLERFLNRAAVAFQNLFMAVEDHFELCLAKCRTSSQSVQHENTYRDPIAK 192

Query:   153 HCF 155
             +C+
Sbjct:   193 YCY 195

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005576 "extracellular region" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q17QN8 Q17QN8 "UPF0454 protein C12orf49 homolog" [Bos taurus (taxid:9913)]

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 46/123 (37%), Positives = 69/123 (56%)

Query:    39 CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCPEK--GEK-FSCQGCNLLSQCCNSYEYCV 95
             C+ ++QG++L++D+ GYVC+   +     CC     G K + C GC L S CC++YEYCV
Sbjct:    75 CRNSIQGKHLITDELGYVCERRDLLVNG-CCNVNVPGTKQYCCDGC-LSSGCCSAYEYCV 132

Query:    96 SCCVNPARTLK-EQVLN-VKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAYLSDF-H 152
             SCC+ P + L  E+ LN   +A           F+ C  +CR +S+SV HEN Y      
Sbjct:   133 SCCLQPNKQLLLERFLNRAAVAFQNLFMAVEDHFELCLAKCRTSSQSVQHENTYRDPIAK 192

Query:   153 HCF 155
             +C+
Sbjct:   193 YCY 195

GO:0005576 "extracellular region" evidence=IEA

UNIPROTKB|Q9H741 C12orf49 "UPF0454 protein C12orf49" [Homo sapiens (taxid:9606)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 42/123 (34%), Positives = 68/123 (55%)

Query:    39 CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCP---EKGEKFSCQGCNLLSQCCNSYEYCV 95
             C+ ++QG++L++D+ GYVC+   +     CC       +++ C GC   + CC++YEYCV
Sbjct:    75 CRNSIQGKHLITDELGYVCERKDLLVNG-CCNVNVPSTKQYCCDGC-WPNGCCSAYEYCV 132

Query:    96 SCCVNPARTLK-EQVLN-VKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAYLSDF-H 152
             SCC+ P + L  E+ LN   +A           F+ C  +CR +S+SV HEN Y      
Sbjct:   133 SCCLQPNKQLLLERFLNRAAVAFQNLFMAVEDHFELCLAKCRTSSQSVQHENTYRDPIAK 192

Query:   153 HCF 155
             +C+
Sbjct:   193 YCY 195

GO:0005576 "extracellular region" evidence=IEA

UNIPROTKB|Q5ZJE4 RCJMB04_18o22 "UPF0454 protein C12orf49 homolog" [Gallus gallus (taxid:9031)]

 Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 43/123 (34%), Positives = 67/123 (54%)

Query:    39 CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCP---EKGEKFSCQGCNLLSQCCNSYEYCV 95
             C+ +VQG+ L++D+ GY+C+   +     CC       + +SC  C L + CC+ YEYCV
Sbjct:    75 CRNSVQGKLLITDELGYICERKDLLVNG-CCNVNVPSTKLYSCDSC-LPNGCCSVYEYCV 132

Query:    96 SCCVNPART-LKEQVLN-VKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAYLSDF-H 152
             SCC+ P++  L E+ LN   +A           F+ C  +CR +S+SV HEN Y      
Sbjct:   133 SCCLQPSKQHLLERFLNRAAMAFQNLFMAVEDRFELCLAKCRTSSQSVQHENTYRDPIAK 192

Query:   153 HCF 155
             +C+
Sbjct:   193 YCY 195

GO:0005576 "extracellular region" evidence=IEA

ZFIN|ZDB-GENE-050522-367 zgc:110063 "zgc:110063" [Danio rerio (taxid:7955)]

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 44/125 (35%), Positives = 69/125 (55%)

Query:    39 CKTTVQGRYLLSDDNGYVCDAVSMDPQSRCC---PEKGEKFSCQGCNLLSQCCNSYEYCV 95
             C+ ++QG+ LL+D+ GYVC+   +     CC        ++ C+ C L + CC+ YEYCV
Sbjct:    69 CRNSIQGKSLLTDELGYVCERKDLLVNG-CCNVNAPSSSQYVCKSC-LSNGCCSIYEYCV 126

Query:    96 SCCVNPART-LKEQVLNVKIAKPTTAGTYGSV---FDFCAGRCRHNSESVVHENAYLS-D 150
             SCC+ P +  L E+ LN   A       + +V   F+ C  +CR +S+SV HEN Y +  
Sbjct:   127 SCCLQPDKQPLLERFLNR--AAEGFQNLFTAVEDHFELCLAKCRTSSQSVQHENTYRNPQ 184

Query:   151 FHHCF 155
               +C+
Sbjct:   185 AKYCY 189


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.133   0.425    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      272       256   0.00086  114 3  11 22  0.42    33
                                                     32  0.48    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  599 (64 KB)
  Total size of DFA:  208 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.25u 0.12s 21.37t   Elapsed:  00:00:01
  Total cpu time:  21.25u 0.12s 21.37t   Elapsed:  00:00:01
  Start:  Sat May 11 11:00:47 2013   End:  Sat May 11 11:00:48 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	272
pfam10218	132	pfam10218, DUF2054, Uncharacterized conserved prot	1e-44

>gnl|CDD|118742 pfam10218, DUF2054, Uncharacterized conserved protein (DUF2054)

 Score =  146 bits (371), Expect = 1e-44
 Identities = 63/133 (47%), Positives = 82/133 (61%), Gaps = 7/133 (5%)

Query: 29  KDIGFQETPFCKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCP---EKGEKFSCQGCNLLS 85
           KD G      C+ +VQGR L++DD GYVC+ + +   + CCP      ++FSC+ CNL S
Sbjct: 1   KDRGLDPESSCRNSVQGRSLIADDRGYVCERLDL-LVNGCCPVEVPGTKRFSCRTCNLSS 59

Query: 86  QCCNSYEYCVSCCVNPA-RTLKEQVL-NVKIAKPTTAGTYGSVFDFCAGRCRHNSESVVH 143
           QCC+ YEYCVSCC+NP+ R L E+VL    +A+P    T    F+FC  +CR NS SV H
Sbjct: 60  QCCSVYEYCVSCCLNPSKRPLLERVLAKAAVARPAVYATVTDHFEFCLAKCRTNSHSVQH 119

Query: 144 ENAYLS-DFHHCF 155
           EN Y   D  HCF
Sbjct: 120 ENKYRDPDAKHCF 132

This entry contains 14 conserved cysteines, three of which are CC-dimers. The region is of approximately 200 residues in length but its function is unknown. Length = 132

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	272
KOG3136	196	consensus Uncharacterized conserved protein [Funct	100.0
PF10218	131	DUF2054: Uncharacterized conserved protein (DUF205	100.0
PF15024	559	Glyco_transf_18: Glycosyltransferase family 18	99.97

>KOG3136 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=6.5e-56  Score=382.14  Aligned_cols=167  Identities=51%  Similarity=0.962  Sum_probs=152.6

Q ss_pred             CCccccchhhHHHHHHHHHHHHH-H----------------HHhhcccCCCCC---c---cccccccCCeEEecCCCccc
Q 024104            1 MPKSRLNLLFLFFQLLTLQFLSI-I----------------SAIRKDIGFQET---P---FCKTTVQGRYLLSDDNGYVC   57 (272)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~-~----------------~~~~~d~~~~~~---~---~CrntvQg~~li~Dd~G~vC   57 (272)
                      |.|.+..++++..+|+..+.++- +                +.||+|++|+++   +   +||||||||+||+||+||||
T Consensus         1 lrkr~v~~l~~vLlLiygf~~~f~~e~~a~~~~~~~v~~~~~pi~w~~qfl~~~~sR~~~~CRnsvQGr~lisDe~G~VC   80 (196)
T KOG3136|consen    1 LRKRGVSLLFLVLLLIYGFLFPFRVEERAVRDRLLQVHDHNSPIRWDIQFLEENSSRPSNSCRNSVQGRYLISDEEGNVC   80 (196)
T ss_pred             CcceehhHHHHHHHHHHHccChhhhhhhhhhhhhhhhhccCCCcchhhhhccccCCCcchhhhhhhcceeEeeccccchH
Confidence            67888888888777777776665 6                899999999988   3   79999999999999999999


Q ss_pred             cCcccCCCCCCCCCC---CceEeccCCCCCCCCcccCccccccccCCCcch-HHHHhhhhccCCcccccccchhhhhhhh
Q 024104           58 DAVSMDPQSRCCPEK---GEKFSCQGCNLLSQCCNSYEYCVSCCVNPARTL-KEQVLNVKIAKPTTAGTYGSVFDFCAGR  133 (272)
Q Consensus        58 ~r~~l~~~~GCC~~~---~~~~sC~~C~~~~~CC~~YE~CVSCCl~P~k~~-~e~~l~~~~~~~~~~~~~~d~Fe~C~~k  133 (272)
                      .|++++ .|||||..   +++|+|+|||..++||++|||||||||+|.|++ ||++|+++++++.++++++||||+|++|
T Consensus        81 ~r~~~l-~ngCCn~~~p~~~~ysC~gCn~~s~CC~~YEyCVSCCL~P~kQ~LLErvl~a~va~~~~f~tv~dhFelCl~k  159 (196)
T KOG3136|consen   81 DRLLEL-RNGCCNWKGPSTKRYSCHGCNILSQCCNSYEYCVSCCLNPSKQTLLERVLKAKVAKPATFGTVKDHFELCLGK  159 (196)
T ss_pred             HHHHHH-hcCCccccCCCcceeecCCCccccchhhHHHHHHHHHcCCchhHHHHHHHhcccccchhhhhHHHHHHHHHHH
Confidence            999998 79999985   679999999998999999999999999999864 5999999999999999999999999999


Q ss_pred             ccccchhhhhhhhcccc-cCcccCCCCCCCCCCccc
Q 024104          134 CRHNSESVVHENAYLSD-FHHCFSMPSNASGAGVTQ  168 (272)
Q Consensus       134 CRT~s~sv~heN~Y~~~-~~~C~~~~~~~~g~~~~~  168 (272)
                      |||+|+||+|||+|+|+ .|||||.+.|.||++.+|
T Consensus       160 CRtnS~SV~HEN~Yrdp~akhCyglt~~eS~~~l~p  195 (196)
T KOG3136|consen  160 CRTNSESVVHENAYRDPEAKHCYGLTSNESGANLTP  195 (196)
T ss_pred             hcCCchhheecccccChHHHhhcccccccCccccCC
Confidence            99999999999999997 699999999999988544

>PF10218 DUF2054: Uncharacterized conserved protein (DUF2054); InterPro: IPR019352 This family of proteins includes those belonging to UPF0454

Probab=100.00  E-value=1.8e-51  Score=344.23  Aligned_cols=124  Identities=43%  Similarity=0.935  Sum_probs=114.7

Q ss_pred             cCCCCCccccccccCCeEEecCCCccccCcccCCCCCCCCC---CCceEeccCCCCCCCCcccCccccccccCCCcc-hH
Q 024104           31 IGFQETPFCKTTVQGRYLLSDDNGYVCDAVSMDPQSRCCPE---KGEKFSCQGCNLLSQCCNSYEYCVSCCVNPART-LK  106 (272)
Q Consensus        31 ~~~~~~~~CrntvQg~~li~Dd~G~vC~r~~l~~~~GCC~~---~~~~~sC~~C~~~~~CC~~YE~CVSCCl~P~k~-~~  106 (272)
                      ......+.|||||||+.||+||+||||+|++|+ +||||+.   .++||+|++||..++||++|||||||||+|+|+ +|
T Consensus         2 ~~~~~~~~CrntvQG~~li~Dd~G~VC~r~~l~-~nGCC~~~~~~~~r~sC~~Cn~~~~CC~~YE~CVSCCL~P~k~~~l   80 (131)
T PF10218_consen    2 RSSSPSQSCRNTVQGRHLIVDDRGYVCSRSDLL-VNGCCNVNAPGTKRYSCDGCNLSSGCCSIYEYCVSCCLHPDKQPLL   80 (131)
T ss_pred             CCCCCcccccccccCCeEEECCCCcccCHHHcc-cCCCCCCCCCCceeEECCCcCCCCCcccchhhhhhhccChhhhhHH
Confidence            344556889999999999999999999999996 7999994   689999999988999999999999999999975 56


Q ss_pred             HHHh-hhhccCCcccccccchhhhhhhhccccchhhhhhhhccc-ccCccc
Q 024104          107 EQVL-NVKIAKPTTAGTYGSVFDFCAGRCRHNSESVVHENAYLS-DFHHCF  155 (272)
Q Consensus       107 e~~l-~~~~~~~~~~~~~~d~Fe~C~~kCRT~s~sv~heN~Y~~-~~~~C~  155 (272)
                      |++| +++.+++.++++|+|+||||++||||+|+||+|||+|++ +.||||
T Consensus        81 e~~l~~~~~~~~~~~~~~~d~FelC~~kCRTsS~SV~HEN~Yr~p~~k~Cy  131 (131)
T PF10218_consen   81 ERVLRKAAVARQRLFGSVTDQFELCLAKCRTSSQSVQHENTYRDPDAKHCY  131 (131)
T ss_pred             HHHHHHhhhcccceehhhccHHHHHHHHhcCCchhceecccccCcccccCC
Confidence            8898 888899999999999999999999999999999999999 589998

It is conserved from nematodes to plants and is functionally uncharacterised. It contains 14 conserved cysteines, three of which are CC-dimers.

>PF15024 Glyco_transf_18: Glycosyltransferase family 18

Probab=99.97  E-value=4.9e-32  Score=269.22  Aligned_cols=121  Identities=30%  Similarity=0.608  Sum_probs=107.9

Q ss_pred             hhhhhhhhccccchhhhhhhhcccccCcccCCCCCCCCCCcccccccccceEEEeCCCCCcHHHHHHhcCCceecCCCcc
Q 024104          126 VFDFCAGRCRHNSESVVHENAYLSDFHHCFSMPSNASGAGVTQLEGRLSGISVIIGRQGESCDSVCKSSGQSCVLNKLIL  205 (272)
Q Consensus       126 ~Fe~C~~kCRT~s~sv~heN~Y~~~~~~C~~~~~~~~g~~~~~~~ppls~l~vv~~~~GqSC~~aC~~~gl~CepsfF~~  205 (272)
                      +||+      |.+|||+|+|+|+++|+||.+..          .|||+++|+||++++||||+++|+++||+|||+||++
T Consensus       437 P~ef------T~egmLeRv~~~ie~q~fC~~~~----------~WPPlsaL~vv~~~~GqSC~~~C~~~gliCEPsfFp~  500 (559)
T PF15024_consen  437 PYEF------TCEGMLERVNALIEKQDFCDKSV----------RWPPLSALQVVLGEPGQSCKDACQSKGLICEPSFFPF  500 (559)
T ss_pred             Cccc------CHHHHHHHHHHHHHhhhhccccC----------CCCChhheEEEEcCCCCCHHHHHHhhCcEEcHhhhhh
Confidence            5899      99999999999999999999865          4899999999999999999999999999999999999


Q ss_pred             ccchHHHHHh-ccccccccccCCCCCCCcccccCCCC-CCCCceeecCCCCccccCCCCCCCceeccC
Q 024104          206 LNQCEIIQKY-MSCKRGCLASMGADQPAEVADDAPSN-LNPTACLYTRIQSMLSCDGSHRHTRRLCPC  271 (272)
Q Consensus       206 IN~c~~l~k~-~~C~~~C~~~~g~d~pa~vv~~ap~h-l~p~~C~lq~~~llFSCags~~~~rRLCPC  271 (272)
                      ||++++|+|+ ++|++..       .  +....||.+ ..+++|++|++++||||+|+|+++||||||
T Consensus       501 IN~~~~l~r~~~~C~~~e-------~--~~~~~aP~f~~~~~~C~lQ~~~lLFSCags~~~~rRLCPC  559 (559)
T PF15024_consen  501 INRCDELQRLGVNCDSTE-------S--EMSHLAPAFSPNPGHCVLQSDPLLFSCAGSHPSYRRLCPC  559 (559)
T ss_pred             hccHHHHHhhCCCCCccc-------c--cCcccCCCCCCCCCeeeeCCCCceeecCCCCCCCCccCCC
Confidence            9999999997 6777421       1  123456663 467899999999999999999999999999

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00