Citrus Sinensis ID: 024106

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270--
Protein Sequence
MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Secondary Structure (PSIPRED)
ccccccccEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccHHHHHHccccccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEEEccccccccccccccccEEEEccHHHHHHHHHHHHHccccccHHHcccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccHcccccHHHHcc
Coil and Loop (DISEMBL)
MDERGGSFVAVRRIsqgldrgntchstsAEVVAGSAAWLGRGLSCVcaqrresdprpsfdltpAQEECLQRLQLRIdvaydssiPEHREALRALWNAAFPDEELRDLISEQWKemgwqgkdpstdfrgggfiSLENLLYLARNFPKSFQDLLRkqegdrsvweypfavagVNITFMLIQMLDLEAAcfnftvkprtmVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVtrledlpsysllsr
Flexible Loop (DISEMBL)
MDERGGSFVAVRrisqgldrgntchSTSAEVVAGSAAWLGRGLSCVCAQRRESDprpsfdltpAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLEREllledvtrledlpsysllsr
Low Complexity Region (SEG)
MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTrrqlerellleDVTRLEDLPSYSLLSR
Disordered region (IsUnstruct)
********VAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCA******************ECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDV**************
Disordered Region (DISOPRED)
******S***VRRISQGLDRG*********VVAGSAAWLGRGLSCV************FDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAF************WKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRK****RSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLS*
Disordered Region (DISEMBL)
MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQR********FDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Disordered Region (DISPRO)
*****GSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	272	2.2.26 [Sep-21-2011]
Q54YW1	977	ELMO domain-containing pr	yes	no	0.709	0.197	0.313	3e-25
Q54RS7	618	ELMO domain-containing pr	no	no	0.669	0.294	0.322	7e-24
Q54UP9	1267	Ankyrin repeat and ELMO d	no	no	0.613	0.131	0.291	7e-19
Q54VR8	284	ELMO domain-containing pr	no	no	0.540	0.517	0.317	2e-17
Q08DZ3	293	ELMO domain-containing pr	yes	no	0.716	0.665	0.296	3e-17
Q8IZ81	293	ELMO domain-containing pr	yes	no	0.602	0.559	0.310	4e-17
Q499U2	720	Engulfment and cell motil	yes	no	0.661	0.25	0.268	5e-16
A6QR40	652	Engulfment and cell motil	no	no	0.650	0.271	0.262	1e-15
Q8BGF6	293	ELMO domain-containing pr	yes	no	0.533	0.494	0.323	1e-15
Q96BJ8	720	Engulfment and cell motil	no	no	0.661	0.25	0.258	2e-15

>sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A OS=Dictyostelium discoideum GN=elmoA PE=1 SV=1

 Score =  115 bits (288), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 67/214 (31%), Positives = 102/214 (47%), Gaps = 21/214 (9%)

Query: 65  QEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPST 124
           Q    Q +  R +V ++    EH   L  LW+  +P  +L   +SEQWK+MG+QG DP T
Sbjct: 362 QRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCT 421

Query: 125 DFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQ-MLDL 183
           DFR  G   L+NL+Y A+N+ + F+ ++  Q  DR   EYP A AG+ +TF L   +  +
Sbjct: 422 DFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQI-DRKEREYPTATAGIVLTFELYNSIFKM 480

Query: 184 EAACFN-----------FTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMR 232
                N            T     +    F      +  AF+ +YC TF+++D  W  M 
Sbjct: 481 GTPNLNPYNSTTSNTTSNTTSTTNIDDLPFFPLFFSHPHAFEEVYCTTFQILDSTWDDMN 540

Query: 233 ASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPS 266
            +YM F  +M S +  +        +T LE  P+
Sbjct: 541 GTYMHFQKIMSSVKNLI--------ITALESKPT 566

Functions as a negative regulator of actin polymerization. Modulates actin/myosin II at cortex actinomyosins to prevent excessive F-actin polymerization around the cell periphery, thereby maintaining proper cell shape during phagocytosis and chemotaxis.
Dictyostelium discoideum (taxid: 44689)

>sp|Q54RS7|ELMOC_DICDI ELMO domain-containing protein C OS=Dictyostelium discoideum GN=elmoC PE=4 SV=1

 Score =  110 bits (276), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 106/192 (55%), Gaps = 10/192 (5%)

Query: 61  LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
           +T  Q + ++ L  +    Y+S+ P+H E L+ LW+  +P++E +   S  WK+ G+Q  
Sbjct: 357 VTAKQSQTIKILFQKKSTIYESTNPDHEEYLKHLWSLLYPEQEFQKK-SPLWKKFGFQSD 415

Query: 121 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180
           DP+ DFRG G + L NL++L ++     Q++L +   DR   +YPFAVAG+NI+ ++ ++
Sbjct: 416 DPTRDFRGMGIMGLLNLIHLVQHHNDWVQEILAQ---DR---DYPFAVAGINISNLIFEV 469

Query: 181 LDLEAACFN---FTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMD 237
             +         ++    +   A        N+ AF+ LY + F L+DH W+ M A+YM 
Sbjct: 470 FQISEDSLQQPWYSSFWSSSYMAMLCSMSRHNDHAFEELYFLIFNLLDHLWIQMNATYMM 529

Query: 238 FNTVMKSTRRQL 249
           F  V+K  + QL
Sbjct: 530 FPLVIKKLKSQL 541

Dictyostelium discoideum (taxid: 44689)

>sp|Q54UP9|ELMOD_DICDI Ankyrin repeat and ELMO domain-containing protein D OS=Dictyostelium discoideum GN=elmoD PE=4 SV=1

 Score = 94.4 bits (233), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 8/175 (4%)

Query: 69  LQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRG 128
           +Q L +     Y+   P H+  L  LW+  FP++  +    E W+ +G+Q KDPS+DFRG
Sbjct: 290 IQGLIMDSKTPYNKDEPSHQRLLETLWSTLFPNQVFQR-SHENWQIIGFQNKDPSSDFRG 348

Query: 129 GGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACF 188
            G   L++L+YLA+N    F + L  ++ + +   YP+A +G+ +T  L++ +       
Sbjct: 349 MGLAGLKHLIYLAQNHKDMFMNPLINRQPEANY--YPYATSGIQVTSFLVECVK----PI 402

Query: 189 NFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 243
           N +     ++G  +   L E+E+A + +YC+  ++    W    A+YM F  V +
Sbjct: 403 NISANHSDVIGQIY-PILFESENALNEIYCVLMEIFGIVWKDWNATYMIFQKVFQ 456

Dictyostelium discoideum (taxid: 44689)

>sp|Q54VR8|ELMOB_DICDI ELMO domain-containing protein B OS=Dictyostelium discoideum GN=elmoB PE=4 SV=1

 Score = 90.1 bits (222), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 89/170 (52%), Gaps = 23/170 (13%)

Query: 78  VAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENL 137
           + YD++  EH  +L  LW A  PD      +S++W  +G+QG DP+TDFRG G + L+NL
Sbjct: 116 IPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGMGILGLDNL 175

Query: 138 LYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTM 197
           +Y +    +  +++L+      S   YPFA+ G+NIT +++ ++D          KP   
Sbjct: 176 IYFSTQHSEDAREILK---NSNSKCCYPFAITGINITALVLNLID----------KPH-- 220

Query: 198 VGATFLKFLSENESA---FDLLYCITFKLMDHQWLAMR-ASYMDFNTVMK 243
               F  +  +N S    F+ LY + F   D  + + +  S M+FNT+ K
Sbjct: 221 ----FKIYFFKNGSTLTQFNELYSLVFISFDRFYQSKKPKSIMEFNTIKK 266

Dictyostelium discoideum (taxid: 44689)

>sp|Q08DZ3|ELMD2_BOVIN ELMO domain-containing protein 2 OS=Bos taurus GN=ELMOD2 PE=1 SV=1

 Score = 89.0 bits (219), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 99/226 (43%), Gaps = 31/226 (13%)

Query: 45  CVCAQRRESDPRPSFD--LTPAQEECLQRL----QLRIDV------AYDSSIPEHREALR 92
           CV    +E +  P  D       + CL ++    QL +DV       YDS   +H + L 
Sbjct: 73  CVEDIMKEKNINPEKDASFKICMKACLLQISGYKQLYLDVESVRKKPYDSDNLQHEKLLI 132

Query: 93  ALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLL 152
            LWN   P ++L+  IS+QW ++G+QG DP TDFRG G + L NL+Y + N+      +L
Sbjct: 133 KLWNLLMPTKKLKARISKQWADIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQIL 192

Query: 153 RKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACF---NFTVKPRTMVGATFLKFLSEN 209
            +    +    Y +A+ G+N+T M   +L  EA  F   NF     TM            
Sbjct: 193 SRSNHPKL--GYSYAIVGINLTEMAYSLLKSEALKFHLYNFVPGIPTM------------ 238

Query: 210 ESAFDLLYCITFKLMDHQWLAMRA-SYMDFNTVMKSTRRQLERELL 254
              F   YC      D  W   +  S M FN   +    +++  LL
Sbjct: 239 -EHFHQFYCYLVYEFDKFWFEEKPESIMYFNVYREKFHEKIKGLLL 283

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Bos taurus (taxid: 9913)

>sp|Q8IZ81|ELMD2_HUMAN ELMO domain-containing protein 2 OS=Homo sapiens GN=ELMOD2 PE=1 SV=1

 Score = 89.0 bits (219), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 13/177 (7%)

Query: 49  QRRESDPRPSFDLTPAQEECLQRL----QLRIDV------AYDSSIPEHREALRALWNAA 98
           + +  +P          + CL ++    QL +DV       YDS   +H E L  LWN  
Sbjct: 79  KEKNINPEKDASFKICMKMCLLQITGYKQLYLDVESVRKRPYDSDNLQHEELLMKLWNLL 138

Query: 99  FPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGD 158
            P ++L   IS+QW E+G+QG DP TDFRG G + L NL+Y + N+      +L +    
Sbjct: 139 MPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSNHP 198

Query: 159 RSVWEYPFAVAGVNITFMLIQMLDLEAACFN-FTVKPRTMVGATFLKFLSENESAFD 214
           +    Y +A+ G+N+T M   +L  EA  F+ + + P       F +F       FD
Sbjct: 199 KL--GYSYAIVGINLTEMAYSLLKSEALKFHLYNLVPGIPTMEHFHQFYCYLVYEFD 253

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family. Regulates IFN-related antiviral responses.

Homo sapiens (taxid: 9606)

>sp|Q499U2|ELMO3_RAT Engulfment and cell motility protein 3 OS=Rattus norvegicus GN=Elmo3 PE=2 SV=1

 Score = 85.1 bits (209), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 21/201 (10%)

Query: 72  LQLRIDVAYDSSIPEHREALRALWNAAF-PDEE----------LRDLISEQWKEMGWQGK 120
           L+ R+    D    E RE L+AL  AAF PD E           R L   +++++G+   
Sbjct: 293 LEPRMRTPLDPYSQEQREQLQALRQAAFEPDGESLGTGLSADRRRSLCVREFRKLGFSNS 352

Query: 121 DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 178
            P+ D      G ++L+N+LY +R+ P ++   + +        E PFA + + +T +L 
Sbjct: 353 SPAQDLERVPPGLLALDNMLYFSRHAPSAYSRFVLENSSREDKHECPFARSSIQLTVLLC 412

Query: 179 QMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDF 238
           ++L +   C        +     F       + +F  L+C+  +L++  W  MRA+  DF
Sbjct: 413 ELLHVGEPC--------SETAQDFSPMFFSQDHSFHELFCVAIQLLNKTWKEMRATQEDF 464

Query: 239 NTVMKSTRRQLERELLLEDVT 259
           + VM+  R QL R L L+  +
Sbjct: 465 DKVMQVVREQLARTLALKPTS 485

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Rattus norvegicus (taxid: 10116)

>sp|A6QR40|ELMO3_BOVIN Engulfment and cell motility protein 3 OS=Bos taurus GN=ELMO3 PE=2 SV=1

 Score = 84.0 bits (206), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 21/198 (10%)

Query: 72  LQLRIDVAYDSSIPEHREALRALWNAAFPDE-----------ELRDLISEQWKEMGWQGK 120
           L+ R+    D    E RE L+AL  AAF  E             R L + +++++G+   
Sbjct: 293 LEPRMRTPLDPYSQEQREQLQALRQAAFEPEGESVGAGLSADRRRSLCAREFRKLGFSNS 352

Query: 121 DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 178
           +P+ D      G ++L+N+LY +R  P ++   + +        E PFA + + +T +L 
Sbjct: 353 NPAQDLERVPPGLLALDNMLYFSRQAPSAYSRFVLENSSREDKHECPFARSSIQLTVLLC 412

Query: 179 QMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDF 238
            +L +   C        +     F       + +F  L+C++ +L++  W  MRA+  DF
Sbjct: 413 DLLHVGEPC--------SETAQDFSPMFFGQDQSFHELFCVSIQLLNKTWKEMRATQEDF 464

Query: 239 NTVMKSTRRQLERELLLE 256
           + VM+  R QL R L L+
Sbjct: 465 DKVMQVVREQLARTLALK 482

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Bos taurus (taxid: 9913)

>sp|Q8BGF6|ELMD2_MOUSE ELMO domain-containing protein 2 OS=Mus musculus GN=Elmod2 PE=2 SV=1

 Score = 83.6 bits (205), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 76/164 (46%), Gaps = 19/164 (11%)

Query: 80  YDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLY 139
           YDS+  +H + L  LW+   P ++L   IS+QW ++G+QG DP TDFRG G + L NL+Y
Sbjct: 120 YDSANAQHEKMLLKLWSLLMPTKKLTARISKQWADIGFQGDDPKTDFRGMGILGLINLVY 179

Query: 140 LARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEA---ACFNFTVKPRT 196
            + N+      +L +    +    Y +A+ G+N+T M   +L  EA     +NF     T
Sbjct: 180 FSENYTSEAHQILSRSNHPK--LGYSYAIVGINLTEMAYSLLKSEALKLHLYNFVPGVPT 237

Query: 197 MVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFN 239
           M               F   YC      D  WL     S M FN
Sbjct: 238 M-------------EHFHQFYCYLVYEFDKFWLEEEPESIMYFN 268

Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family.

Mus musculus (taxid: 10090)

>sp|Q96BJ8|ELMO3_HUMAN Engulfment and cell motility protein 3 OS=Homo sapiens GN=ELMO3 PE=2 SV=3

 Score = 83.2 bits (204), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 21/201 (10%)

Query: 72  LQLRIDVAYDSSIPEHREALRALWNAAFPDE-----------ELRDLISEQWKEMGWQGK 120
           L+ R+    D    E RE L+ L  AAF  E             R L + +++++G+   
Sbjct: 293 LEPRMRTPLDPYSQEQREQLQVLRQAAFEVEGESSGAGLSADRRRSLCAREFRKLGFSNS 352

Query: 121 DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLI 178
           +P+ D      G ++L+N+LY +RN P ++   + +        E PFA   + +T +L 
Sbjct: 353 NPAQDLERVPPGLLALDNMLYFSRNAPSAYSRFVLENSSREDKHECPFARGSIQLTVLLC 412

Query: 179 QMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDF 238
           ++L +   C        +     F       + +F  L+C+  +L++  W  MRA+  DF
Sbjct: 413 ELLRVGEPC--------SETAQDFSPMFFGQDQSFHELFCVGIQLLNKTWKEMRATQEDF 464

Query: 239 NTVMKSTRRQLERELLLEDVT 259
           + VM+  R QL R L L+  +
Sbjct: 465 DKVMQVVREQLARTLALKPTS 485

Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
255571033	267	ELMO domain-containing protein, putative	0.977	0.996	0.893	1e-139
225453354	267	PREDICTED: ELMO domain-containing protei	0.977	0.996	0.893	1e-138
449445499	267	PREDICTED: ELMO domain-containing protei	0.977	0.996	0.868	1e-136
356568581	266	PREDICTED: ELMO domain-containing protei	0.977	1.0	0.860	1e-136
356531822	266	PREDICTED: ELMO domain-containing protei	0.977	1.0	0.856	1e-136
297734628	287	unnamed protein product [Vitis vinifera]	0.977	0.926	0.832	1e-135
224137120	267	predicted protein [Populus trichocarpa]	0.977	0.996	0.864	1e-135
224063629	267	predicted protein [Populus trichocarpa]	0.977	0.996	0.860	1e-134
147811501	251	hypothetical protein VITISV_036799 [Viti	0.919	0.996	0.849	1e-129
297817322	266	hypothetical protein ARALYDRAFT_486497 [	0.977	1.0	0.823	1e-129

>gi|255571033|ref|XP_002526467.1| ELMO domain-containing protein, putative [Ricinus communis] gi|223534142|gb|EEF35858.1| ELMO domain-containing protein, putative [Ricinus communis]

 Score =  498 bits (1283), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 244/273 (89%), Positives = 255/273 (93%), Gaps = 7/273 (2%)

Query: 1   MDERGGSFVAVRRISQGLDRG-NTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSF 59
           MD+RGGSFVAVRRISQGL+RG NTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGSFVAVRRISQGLERGSNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 60  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 119
           DLT  QEECLQRLQ RIDVAYDSSIPEH+EALRALWNAAFP+EELR LISEQWKEMGWQG
Sbjct: 61  DLTLTQEECLQRLQSRIDVAYDSSIPEHQEALRALWNAAFPEEELRGLISEQWKEMGWQG 120

Query: 120 KDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 179
           KDPSTDFRGGGFISLENLL+ A+NFP SFQDLL+K+EGDRSVWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFAKNFPTSFQDLLQKREGDRSVWEYPFAVAGVNITFMLIQ 180

Query: 180 MLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFN 239
           MLDLEA      VKPRTMVGA FLKFL+ENESAFDLLYCITFKLMDHQWL M ASYMDFN
Sbjct: 181 MLDLEA------VKPRTMVGAVFLKFLTENESAFDLLYCITFKLMDHQWLNMHASYMDFN 234

Query: 240 TVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 272
           TVMKSTRRQLERELLLED+TRLEDLPSY LL+R
Sbjct: 235 TVMKSTRRQLERELLLEDITRLEDLPSYGLLTR 267

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453354|ref|XP_002271650.1| PREDICTED: ELMO domain-containing protein A [Vitis vinifera]

 Score =  498 bits (1282), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 244/273 (89%), Positives = 258/273 (94%), Gaps = 7/273 (2%)

Query: 1   MDERGG-SFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSF 59
           MD+RGG SFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 60  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 119
           DLTPAQEECLQRLQ RI+V+YDSSI EH+EALRALWNA+FP+EELRDLISEQWKEMGWQG
Sbjct: 61  DLTPAQEECLQRLQSRIEVSYDSSISEHQEALRALWNASFPEEELRDLISEQWKEMGWQG 120

Query: 120 KDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 179
           KDPSTDFRGGGFISLENLL+ ARN+PKSFQDLLRKQEGDR++WEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFARNYPKSFQDLLRKQEGDRALWEYPFAVAGVNITFMLIQ 180

Query: 180 MLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFN 239
           MLDLEA      VKPR+M GA FLKFLSENESAFDLLYCITFKLMD+QWLAM ASYMDFN
Sbjct: 181 MLDLEA------VKPRSMAGAIFLKFLSENESAFDLLYCITFKLMDNQWLAMHASYMDFN 234

Query: 240 TVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 272
           TVMKSTR QLERELLLEDV+RLEDLPSYSLL+R
Sbjct: 235 TVMKSTRCQLERELLLEDVSRLEDLPSYSLLTR 267

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445499|ref|XP_004140510.1| PREDICTED: ELMO domain-containing protein A-like [Cucumis sativus]

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 237/273 (86%), Positives = 256/273 (93%), Gaps = 7/273 (2%)

Query: 1   MDERGG-SFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSF 59
           MD+RGG SFVAVRRISQGL+RGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 60  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 119
           DLTPAQEECL RLQ RID+AYDSSI EH+EALR LWN AFP+EELR LISEQWKEMGWQG
Sbjct: 61  DLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELRGLISEQWKEMGWQG 120

Query: 120 KDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 179
           KDPSTDFRGGGFISLENLL+ A+NFPKSFQDLLRKQEGDRS+WEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYPFAVAGVNITFMLIQ 180

Query: 180 MLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFN 239
           MLDLEA      VKPRT+VGATFLKFL+EN+SAFDLLYCITFKLMDH+WLAM ASYMDFN
Sbjct: 181 MLDLEA------VKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDHEWLAMHASYMDFN 234

Query: 240 TVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 272
           TVMK+TRRQLE+ELL+ED++RLE+LPSY LL+R
Sbjct: 235 TVMKATRRQLEKELLIEDISRLEELPSYGLLNR 267

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568581|ref|XP_003552489.1| PREDICTED: ELMO domain-containing protein A-like [Glycine max]

 Score =  489 bits (1258), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 234/272 (86%), Positives = 251/272 (92%), Gaps = 6/272 (2%)

Query: 1   MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFD 60
           MD+RGGSFVAVRRISQGLDR NTCHS+SAE V GS AWLGRGLSCVCAQRRESD RPSFD
Sbjct: 1   MDDRGGSFVAVRRISQGLDRSNTCHSSSAEFVTGSTAWLGRGLSCVCAQRRESDARPSFD 60

Query: 61  LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
           LTPAQEECLQRLQ RID+ YD SIPEH++ALRALW+AAFP+EEL  LISEQWK MGWQGK
Sbjct: 61  LTPAQEECLQRLQNRIDIPYDGSIPEHQDALRALWSAAFPEEELHGLISEQWKNMGWQGK 120

Query: 121 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180
           DPSTDFRGGGFISLENLL+ ARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180

Query: 181 LDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNT 240
           LDLEA      VKPRT+VGATFLKFL+EN+SAFDLLYCITFK+MD QWL+MRASYMDFNT
Sbjct: 181 LDLEA------VKPRTLVGATFLKFLAENDSAFDLLYCITFKMMDQQWLSMRASYMDFNT 234

Query: 241 VMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 272
           VMKSTRRQLE+ELLLED+ RLED+PSY LL+R
Sbjct: 235 VMKSTRRQLEKELLLEDIMRLEDVPSYKLLTR 266

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531822|ref|XP_003534475.1| PREDICTED: ELMO domain-containing protein A-like [Glycine max]

 Score =  489 bits (1258), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 233/272 (85%), Positives = 251/272 (92%), Gaps = 6/272 (2%)

Query: 1   MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFD 60
           MD+RGGSFVAVRRISQGLDR NTCHS+SAE V GS AWLGRGLSCVCAQRRESD RPSFD
Sbjct: 1   MDDRGGSFVAVRRISQGLDRSNTCHSSSAEFVTGSTAWLGRGLSCVCAQRRESDARPSFD 60

Query: 61  LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
           LTPAQEECLQRLQ RID+ YD S+PEH++ALR LWNAAFP+EEL  LISEQWK+MGWQGK
Sbjct: 61  LTPAQEECLQRLQSRIDIPYDGSVPEHQDALRDLWNAAFPEEELHGLISEQWKDMGWQGK 120

Query: 121 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180
           DPSTDFRGGGFISLENLL+ ARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180

Query: 181 LDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNT 240
           LDLEA      VKPRT+VGATFLKFL+EN+SAFDLLYCITFK+MD QWL+MRASYMDFNT
Sbjct: 181 LDLEA------VKPRTLVGATFLKFLAENDSAFDLLYCITFKMMDQQWLSMRASYMDFNT 234

Query: 241 VMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 272
           VMKSTRRQLE+ELLLED+ RLED+PSY LL+R
Sbjct: 235 VMKSTRRQLEKELLLEDIMRLEDVPSYKLLTR 266

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734628|emb|CBI16679.3| unnamed protein product [Vitis vinifera]

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 244/293 (83%), Positives = 258/293 (88%), Gaps = 27/293 (9%)

Query: 1   MDERGG-SFVAVRRISQGLDRGNTCHSTS--------------------AEVVAGSAAWL 39
           MD+RGG SFVAVRRISQGLDRGNTCHSTS                    AEVVAGSAAWL
Sbjct: 1   MDDRGGGSFVAVRRISQGLDRGNTCHSTSDLSISVIVNNFMFTDIQICLAEVVAGSAAWL 60

Query: 40  GRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAF 99
           GRGLSCVCAQRRESD RPSFDLTPAQEECLQRLQ RI+V+YDSSI EH+EALRALWNA+F
Sbjct: 61  GRGLSCVCAQRRESDARPSFDLTPAQEECLQRLQSRIEVSYDSSISEHQEALRALWNASF 120

Query: 100 PDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDR 159
           P+EELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLL+ ARN+PKSFQDLLRKQEGDR
Sbjct: 121 PEEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNYPKSFQDLLRKQEGDR 180

Query: 160 SVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCI 219
           ++WEYPFAVAGVNITFMLIQMLDLEA      VKPR+M GA FLKFLSENESAFDLLYCI
Sbjct: 181 ALWEYPFAVAGVNITFMLIQMLDLEA------VKPRSMAGAIFLKFLSENESAFDLLYCI 234

Query: 220 TFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 272
           TFKLMD+QWLAM ASYMDFNTVMKSTR QLERELLLEDV+RLEDLPSYSLL+R
Sbjct: 235 TFKLMDNQWLAMHASYMDFNTVMKSTRCQLERELLLEDVSRLEDLPSYSLLTR 287

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137120|ref|XP_002327028.1| predicted protein [Populus trichocarpa] gi|222835343|gb|EEE73778.1| predicted protein [Populus trichocarpa]

 Score =  485 bits (1249), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 236/273 (86%), Positives = 254/273 (93%), Gaps = 7/273 (2%)

Query: 1   MDERGGSFVAVRRISQGLDRGN-TCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSF 59
           MD+RGGSFVAVRRISQGL+RGN TCHS+SAEVVAGSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGSFVAVRRISQGLERGNNTCHSSSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 60  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 119
           DLTP QEECLQRLQ RIDVAYDSS+PEH+EAL+ALWNAAFP+EEL  LISEQWKEMGWQG
Sbjct: 61  DLTPPQEECLQRLQSRIDVAYDSSVPEHQEALKALWNAAFPEEELHGLISEQWKEMGWQG 120

Query: 120 KDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 179
           KDPSTDFRGGGFISLENLL+ ARNFP SFQDLL+K+EGDRSVWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFARNFPTSFQDLLQKREGDRSVWEYPFAVAGVNITFMLIQ 180

Query: 180 MLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFN 239
           MLDLEA      VKPRT+VGATFLKFL E++SAFD LYCITFKLMDH+WL MRASYMDFN
Sbjct: 181 MLDLEA------VKPRTLVGATFLKFLEEDDSAFDRLYCITFKLMDHEWLDMRASYMDFN 234

Query: 240 TVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 272
            VMKSTRRQLERELL ED+TRLE+LPSY+LL+R
Sbjct: 235 AVMKSTRRQLERELLSEDITRLEELPSYTLLTR 267

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063629|ref|XP_002301236.1| predicted protein [Populus trichocarpa] gi|222842962|gb|EEE80509.1| predicted protein [Populus trichocarpa]

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 235/273 (86%), Positives = 252/273 (92%), Gaps = 7/273 (2%)

Query: 1   MDERGGSFVAVRRISQGLDRGN-TCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSF 59
           MD+RGGSFVAVRRISQGL+RGN TCHSTSAE VAGSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGSFVAVRRISQGLERGNNTCHSTSAEAVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 60  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 119
           DLTP QEECLQRLQ RIDV YDSS+ +H+EAL+ LWNAAFP+EEL  LISEQWKEMGWQG
Sbjct: 61  DLTPVQEECLQRLQSRIDVPYDSSVLDHQEALKTLWNAAFPEEELHGLISEQWKEMGWQG 120

Query: 120 KDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 179
           KDPSTDFRGGGFISLENLL+ ARNFPKSFQDLL+K+EGDRSVWEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFARNFPKSFQDLLQKREGDRSVWEYPFAVAGVNITFMLIQ 180

Query: 180 MLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFN 239
           MLDLEA      VKPR +VGATFLKFL+EN+SAFDLLYCITFKLMDH+WL MRASYMDFN
Sbjct: 181 MLDLEA------VKPRALVGATFLKFLAENDSAFDLLYCITFKLMDHEWLTMRASYMDFN 234

Query: 240 TVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 272
            VMKSTRRQLERELL ED+TRLEDLPSY+LL+R
Sbjct: 235 AVMKSTRRQLERELLSEDITRLEDLPSYTLLTR 267

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147811501|emb|CAN74275.1| hypothetical protein VITISV_036799 [Vitis vinifera]

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 232/273 (84%), Positives = 245/273 (89%), Gaps = 23/273 (8%)

Query: 1   MDERGG-SFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSF 59
           MD+RGG SFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESD RPSF
Sbjct: 1   MDDRGGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDARPSF 60

Query: 60  DLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQG 119
           DLTPAQEECLQRLQ RI+V+YDSSI EH+EALRALWNA+FP+EELRDLISEQWKEMGWQG
Sbjct: 61  DLTPAQEECLQRLQSRIEVSYDSSISEHQEALRALWNASFPEEELRDLISEQWKEMGWQG 120

Query: 120 KDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQ 179
           KDPSTDFRGGGFISLENLL+ ARN+PKSFQDLLRKQEGDR++WEYPFAVAGVNITFMLIQ
Sbjct: 121 KDPSTDFRGGGFISLENLLFFARNYPKSFQDLLRKQEGDRALWEYPFAVAGVNITFMLIQ 180

Query: 180 MLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFN 239
           MLDLEA                      ENESAFDLLYCITFKLMD+QWLAM ASYMDFN
Sbjct: 181 MLDLEA----------------------ENESAFDLLYCITFKLMDNQWLAMHASYMDFN 218

Query: 240 TVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 272
           TVMKSTRRQLERELLLEDV+RLEDLPSYSLL+R
Sbjct: 219 TVMKSTRRQLERELLLEDVSRLEDLPSYSLLTR 251

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817322|ref|XP_002876544.1| hypothetical protein ARALYDRAFT_486497 [Arabidopsis lyrata subsp. lyrata] gi|297322382|gb|EFH52803.1| hypothetical protein ARALYDRAFT_486497 [Arabidopsis lyrata subsp. lyrata]

 Score =  467 bits (1202), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 224/272 (82%), Positives = 246/272 (90%), Gaps = 6/272 (2%)

Query: 1   MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFD 60
           MD+RGGSFVAVRRISQGL+RG+  HS+SAEVVAGSAAWLGRGLSCVC Q R+ DPRPSFD
Sbjct: 1   MDDRGGSFVAVRRISQGLERGSVYHSSSAEVVAGSAAWLGRGLSCVCVQGRDGDPRPSFD 60

Query: 61  LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
           LTPAQEECLQRLQ RIDVAYDSSI +H+EAL+ LW  AFP+EEL  ++SEQWKEMGWQGK
Sbjct: 61  LTPAQEECLQRLQSRIDVAYDSSISQHQEALKDLWKLAFPEEELHGIVSEQWKEMGWQGK 120

Query: 121 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180
           DPSTDFRGGGFISLENLLY AR FPKSFQDLLRKQ GDRSVWEYPFAVAG+NITFMLIQM
Sbjct: 121 DPSTDFRGGGFISLENLLYFARQFPKSFQDLLRKQVGDRSVWEYPFAVAGINITFMLIQM 180

Query: 181 LDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNT 240
           LDLEA      VKPR++VG TFL+FLS NESAFDLLYCI FKLMD QWL+MRASYM+FNT
Sbjct: 181 LDLEA------VKPRSIVGETFLRFLSVNESAFDLLYCIAFKLMDQQWLSMRASYMEFNT 234

Query: 241 VMKSTRRQLERELLLEDVTRLEDLPSYSLLSR 272
           VMKSTRRQLERE+++ED+T LEDLPSYSLLS+
Sbjct: 235 VMKSTRRQLEREIMVEDITCLEDLPSYSLLSQ 266

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	272
TAIR|locus:2081947	266	AT3G60260 "AT3G60260" [Arabido	0.977	1.0	0.786	6.6e-113
TAIR|locus:2042456	266	AT2G44770 "AT2G44770" [Arabido	0.977	1.0	0.779	2.9e-110
TAIR|locus:2019544	281	AT1G67400 [Arabidopsis thalian	0.856	0.829	0.566	1.4e-69
TAIR|locus:2020753	265	AT1G03620 "AT1G03620" [Arabido	0.863	0.886	0.539	2e-65
TAIR|locus:2096389	323	AT3G03610 "AT3G03610" [Arabido	0.863	0.727	0.528	4.8e-62
TAIR|locus:2102276	213	AT3G43400 "AT3G43400" [Arabido	0.551	0.704	0.580	6.4e-44
DICTYBASE|DDB_G0278051	977	elmoA "engulfment and cell mot	0.658	0.183	0.343	2.8e-23
DICTYBASE|DDB_G0282949	618	elmoC "engulfment and cell mot	0.647	0.284	0.322	1.4e-22
DICTYBASE|DDB_G0280179	284	elmoB "engulfment and cell mot	0.551	0.528	0.323	8.3e-19
DICTYBASE|DDB_G0280943	1267	elmoD "engulfment and cell mot	0.613	0.131	0.291	1.6e-18

TAIR|locus:2081947 AT3G60260 "AT3G60260" [Arabidopsis thaliana (taxid:3702)]

 Score = 1114 (397.2 bits), Expect = 6.6e-113, P = 6.6e-113
 Identities = 214/272 (78%), Positives = 234/272 (86%)

Query:     1 MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFD 60
             MD+RGGSFVAVRRISQGL+RG+  HS+SAEVVAGSAAWLGRGLSCVC Q R+ DPRPSFD
Sbjct:     1 MDDRGGSFVAVRRISQGLERGSVYHSSSAEVVAGSAAWLGRGLSCVCVQGRDGDPRPSFD 60

Query:    61 LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
             LTPAQEECLQRLQ RIDVAYDSSIP+H+EAL+ LW  AFP+EEL  ++S+QWKEMGWQGK
Sbjct:    61 LTPAQEECLQRLQSRIDVAYDSSIPQHQEALKDLWKLAFPEEELHGIVSDQWKEMGWQGK 120

Query:   121 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180
             DPSTDFRGGGFISLENLLY AR FPKSF  LLRKQ GDRSVWEYPFAVAG+NITFMLIQM
Sbjct:   121 DPSTDFRGGGFISLENLLYFARKFPKSFHGLLRKQVGDRSVWEYPFAVAGINITFMLIQM 180

Query:   181 LDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNT 240
             LDLEA      VKPR++VG TFL+FLS NESAFDLLYCI FKLMD QWL+MRASYM+FNT
Sbjct:   181 LDLEA------VKPRSIVGETFLRFLSVNESAFDLLYCIAFKLMDQQWLSMRASYMEFNT 234

Query:   241 VMKSTXXXXXXXXXXXDVTRLEDLPSYSLLSR 272
             VMKST           D+T LEDLPSYSLLS+
Sbjct:   235 VMKSTRRQLEREIMIEDITSLEDLPSYSLLSQ 266

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2042456 AT2G44770 "AT2G44770" [Arabidopsis thaliana (taxid:3702)]

 Score = 1089 (388.4 bits), Expect = 2.9e-110, P = 2.9e-110
 Identities = 212/272 (77%), Positives = 232/272 (85%)

Query:     1 MDERGGSFVAVRRISQGLDRGNTCHSTSAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFD 60
             MD+R GSFVAVRRISQGL+RG+  +S+SAE V GSAAWLGRGLSCVCAQRR+SD   +FD
Sbjct:     1 MDDREGSFVAVRRISQGLERGSVYNSSSAEAVPGSAAWLGRGLSCVCAQRRDSDANSTFD 60

Query:    61 LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
             LTPAQEECLQ LQ RIDVAYDS+IP H+EALR LW  +FP+EEL  LISEQWKEMGWQGK
Sbjct:    61 LTPAQEECLQSLQNRIDVAYDSTIPLHQEALRELWKLSFPEEELHGLISEQWKEMGWQGK 120

Query:   121 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180
             DPSTDFRGGGFISLENLLY ARNF KSFQDLLRKQ GDRSVWEYPFAVAG+N+TFMLIQM
Sbjct:   121 DPSTDFRGGGFISLENLLYFARNFQKSFQDLLRKQVGDRSVWEYPFAVAGINLTFMLIQM 180

Query:   181 LDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNT 240
             LDLEA      VKPRT+VGATFLKFLSENESAFDLLYCI FKLMD QWL+MRASYM+FNT
Sbjct:   181 LDLEA------VKPRTIVGATFLKFLSENESAFDLLYCIAFKLMDQQWLSMRASYMEFNT 234

Query:   241 VMKSTXXXXXXXXXXXDVTRLEDLPSYSLLSR 272
             VMKST           D+  LEDLPSY+LL++
Sbjct:   235 VMKSTRRQLERELMLEDIMHLEDLPSYALLNQ 266

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2019544 AT1G67400 [Arabidopsis thaliana (taxid:3702)]

 Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
 Identities = 136/240 (56%), Positives = 176/240 (73%)

Query:    33 AGSAAW-LGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREAL 91
             + + +W + + L+CVC  R+ +  R   +LTP QEE L+RL+ R+   YD+S P+H++AL
Sbjct:    48 SSTPSWRIKKSLTCVCFNRKRAYERICSNLTPLQEERLKRLRKRMKNYYDASRPDHQDAL 107

Query:    92 RALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDL 151
             RALW+A +PDE+L+DLIS+QWK MGWQGKDPSTDFRG GFISLENLL+ A+ F  SFQ L
Sbjct:   108 RALWSATYPDEKLQDLISDQWKNMGWQGKDPSTDFRGAGFISLENLLFFAKTFSTSFQRL 167

Query:   152 LRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLSENES 211
             L KQ G R+ WEYPFAVAGVNITFM++QMLDLEA+      KPR+ +   FL+ LSE+E 
Sbjct:   168 LNKQGGKRAAWEYPFAVAGVNITFMIMQMLDLEAS------KPRSFIRLVFLQMLSESEW 221

Query:   212 AFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTXXXXXXXXXXXDVTRLEDLPSYSLLS 271
             AFDLLYC+ F +MD QWL   A+YM+FN V++ T           DV R+ED+PS+SLLS
Sbjct:   222 AFDLLYCVAFVVMDKQWLDKNATYMEFNDVLRCTRGQLERELMMDDVFRIEDMPSFSLLS 281

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

TAIR|locus:2020753 AT1G03620 "AT1G03620" [Arabidopsis thaliana (taxid:3702)]

 Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
 Identities = 131/243 (53%), Positives = 171/243 (70%)

Query:    28 SAEVVAGSAAWLGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEH 87
             +A  + G+ +W+G GL       R  D    + L+P QEE LQRLQ R+ V +D + P+H
Sbjct:    29 TATGMVGTRSWIG-GL--FTRSNRRQDKAVDYTLSPLQEERLQRLQDRMVVPFDETRPDH 85

Query:    88 REALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKS 147
             +E+L+ALWN AFP+  L  L++EQWKEMGWQG +PSTDFRG GFI+LENLL+ AR +P  
Sbjct:    86 QESLKALWNVAFPNVHLTGLVTEQWKEMGWQGPNPSTDFRGCGFIALENLLFSARTYPVC 145

Query:   148 FQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLS 207
             F+ LL KQ GDR+ WEYPFAVAG+NI+FMLIQMLDL+    N   KP+ + G  FLK L 
Sbjct:   146 FRRLLLKQRGDRAKWEYPFAVAGINISFMLIQMLDLQ----N-NPKPKCLPGMNFLKLLE 200

Query:   208 ENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTXXXXXXXXXXXDVTRLEDLPSY 267
             E+E AFD+LYCI F +MD QWLAM ASYM+FN V+++T           D+ R++DLP+Y
Sbjct:   201 EDERAFDVLYCIAFAMMDAQWLAMHASYMEFNEVLQATRNQLERELSLDDIHRIQDLPAY 260

Query:   268 SLL 270
             +LL
Sbjct:   261 NLL 263

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

TAIR|locus:2096389 AT3G03610 "AT3G03610" [Arabidopsis thaliana (taxid:3702)]

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 129/244 (52%), Positives = 168/244 (68%)

Query:    29 AEVVAGSAAWLGRGLSCVCAQRRESDPR--PSFDLTPAQEECLQRLQLRIDVAYDSSIPE 86
             A++V GS + +GR LS     +  +  R  P   L+  QEE L+ ++ RI++ +D S  E
Sbjct:    85 AKIVFGSGSLVGRFLSLPTFGQIGTGGRLLPP-PLSMLQEERLRNIKRRIEIPFDGSRME 143

Query:    87 HREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPK 146
             H++ALR LW  A+P  EL  L SE WKEMGWQG DPSTDFRGGG+ISLENL++ A+ +P+
Sbjct:   144 HQDALRQLWRLAYPQRELPPLKSELWKEMGWQGTDPSTDFRGGGYISLENLIFFAKTYPE 203

Query:   147 SFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFL 206
             SFQ LL KQ+G R+ WEYPFAVAG+NI+FML QMLDL++       KP T+ G  FL FL
Sbjct:   204 SFQRLLHKQDGTRAEWEYPFAVAGINISFMLAQMLDLQSG------KPSTIAGIRFLGFL 257

Query:   207 SENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTXXXXXXXXXXXDVTRLEDLPS 266
              E+E AFD LYCI F++MD QWLA RASYM+FN V+KST           DV+ + DLP+
Sbjct:   258 EEDEMAFDNLYCIAFQMMDAQWLARRASYMEFNDVLKSTRAQLERELALDDVSSITDLPA 317

Query:   267 YSLL 270
             ++LL
Sbjct:   318 FNLL 321

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

TAIR|locus:2102276 AT3G43400 "AT3G43400" [Arabidopsis thaliana (taxid:3702)]

 Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
 Identities = 94/162 (58%), Positives = 117/162 (72%)

Query:    82 SSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLA 141
             SS P  R  ++    + + DE+L+DLIS+QWK MGWQ KDPSTDFRG GFISLENL    
Sbjct:    58 SSTPSWR--IKKSLTSTYADEKLQDLISDQWKNMGWQRKDPSTDFRGDGFISLENL---- 111

Query:   142 RNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGAT 201
             R F K+F  LL+KQ G R+ WEYPFAVAGVNITFM++QMLDLEA+      KPR+ +   
Sbjct:   112 RFFAKTFSRLLKKQGGKRAAWEYPFAVAGVNITFMIMQMLDLEAS------KPRSFIRLV 165

Query:   202 FLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 243
             FL+ LSE+E AF LLYC+ F +MD QWL   A+YM+FN V++
Sbjct:   166 FLQMLSESEWAFGLLYCVAFVVMDKQWLDKNATYMEFNDVLR 207

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006909 "phagocytosis" evidence=IEA

DICTYBASE|DDB_G0278051 elmoA "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 280 (103.6 bits), Expect = 2.8e-23, P = 2.8e-23
 Identities = 66/192 (34%), Positives = 96/192 (50%)

Query:    65 QEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPST 124
             Q    Q +  R +V ++    EH   L  LW+  +P  +L   +SEQWK+MG+QG DP T
Sbjct:   362 QRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCT 421

Query:   125 DFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFML----IQM 180
             DFR  G   L+NL+Y A+N+ + F+ ++  Q  DR   EYP A AG+ +TF L     +M
Sbjct:   422 DFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQI-DRKEREYPTATAGIVLTFELYNSIFKM 480

Query:   181 LDLEAACFNFTVKPRTM--VGAT------FLKFLSENESAFDLLYCITFKLMDHQWLAMR 232
                    +N T    T      T      F      +  AF+ +YC TF+++D  W  M 
Sbjct:   481 GTPNLNPYNSTTSNTTSNTTSTTNIDDLPFFPLFFSHPHAFEEVYCTTFQILDSTWDDMN 540

Query:   233 ASYMDFNTVMKS 244
              +YM F  +M S
Sbjct:   541 GTYMHFQKIMSS 552

GO:0030864 "cortical actin cytoskeleton" evidence=IDA

GO:0050764 "regulation of phagocytosis" evidence=IMP

GO:0048870 "cell motility" evidence=IMP

GO:0045159 "myosin II binding" evidence=IPI

GO:0030837 "negative regulation of actin filament polymerization" evidence=IMP

GO:0030587 "sorocarp development" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

DICTYBASE|DDB_G0282949 elmoC "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 270 (100.1 bits), Expect = 1.4e-22, P = 1.4e-22
 Identities = 60/186 (32%), Positives = 103/186 (55%)

Query:    61 LTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 120
             +T  Q + ++ L  +    Y+S+ P+H E L+ LW+  +P++E +   S  WK+ G+Q  
Sbjct:   357 VTAKQSQTIKILFQKKSTIYESTNPDHEEYLKHLWSLLYPEQEFQKK-SPLWKKFGFQSD 415

Query:   121 DPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQM 180
             DP+ DFRG G + L NL++L ++     Q++L +   DR   +YPFAVAG+NI+ ++ ++
Sbjct:   416 DPTRDFRGMGIMGLLNLIHLVQHHNDWVQEILAQ---DR---DYPFAVAGINISNLIFEV 469

Query:   181 LDLEAACFN---FTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMD 237
               +         ++    +   A        N+ AF+ LY + F L+DH W+ M A+YM 
Sbjct:   470 FQISEDSLQQPWYSSFWSSSYMAMLCSMSRHNDHAFEELYFLIFNLLDHLWIQMNATYMM 529

Query:   238 FNTVMK 243
             F  V+K
Sbjct:   530 FPLVIK 535

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

DICTYBASE|DDB_G0280179 elmoB "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 54/167 (32%), Positives = 88/167 (52%)

Query:    78 VAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENL 137
             + YD++  EH  +L  LW A  PD      +S++W  +G+QG DP+TDFRG G + L+NL
Sbjct:   116 IPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGMGILGLDNL 175

Query:   138 LYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTM 197
             +Y +    +  +++L+      S   YPFA+ G+NIT +++ ++D       F       
Sbjct:   176 IYFSTQHSEDAREILKNSN---SKCCYPFAITGINITALVLNLIDKPHFKIYFFKN---- 228

Query:   198 VGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFNTVMK 243
              G+T  +F   NE     LY + F   D  + + +  S M+FNT+ K
Sbjct:   229 -GSTLTQF---NE-----LYSLVFISFDRFYQSKKPKSIMEFNTIKK 266

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

DICTYBASE|DDB_G0280943 elmoD "engulfment and cell motility ELM family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 237 (88.5 bits), Expect = 1.6e-18, P = 1.6e-18
 Identities = 51/175 (29%), Positives = 92/175 (52%)

Query:    69 LQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRG 128
             +Q L +     Y+   P H+  L  LW+  FP++  +    E W+ +G+Q KDPS+DFRG
Sbjct:   290 IQGLIMDSKTPYNKDEPSHQRLLETLWSTLFPNQVFQRS-HENWQIIGFQNKDPSSDFRG 348

Query:   129 GGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACF 188
              G   L++L+YLA+N    F + L  ++ + +   YP+A +G+ +T  L++ +       
Sbjct:   349 MGLAGLKHLIYLAQNHKDMFMNPLINRQPEANY--YPYATSGIQVTSFLVECVKP----I 402

Query:   189 NFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 243
             N +     ++G  +   L E+E+A + +YC+  ++    W    A+YM F  V +
Sbjct:   403 NISANHSDVIGQIY-PILFESENALNEIYCVLMEIFGIVWKDWNATYMIFQKVFQ 456

GO:0006909 "phagocytosis" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	272
pfam04727	170	pfam04727, ELMO_CED12, ELMO/CED-12 family	6e-67

>gnl|CDD|218231 pfam04727, ELMO_CED12, ELMO/CED-12 family

 Score =  205 bits (523), Expect = 6e-67
 Identities = 73/177 (41%), Positives = 96/177 (54%), Gaps = 7/177 (3%)

Query: 67  ECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDF 126
             L  L+      +D   PEHR  L+ LW A FPDE L   +SE+WK++G+QG DP+TDF
Sbjct: 1   LTLNLLEKLRKTPFDLENPEHRRLLKTLWKALFPDEPLSSRVSEKWKDLGFQGDDPATDF 60

Query: 127 RGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAA 186
           RG G + L NLLY A N+P  FQ LL +     +  EYPFAVA +N+T ML ++L +   
Sbjct: 61  RGTGLLGLLNLLYFAENYPDEFQKLLLESSHRPAEHEYPFAVASINVTSMLYELLRIGK- 119

Query: 187 CFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 243
                +         F         AF+ LYC  F L D  W  MRA+ MDFN V++
Sbjct: 120 -----LDQEDYKNYGF-PLFFPTLLAFEELYCALFHLFDRFWKEMRATIMDFNKVLE 170

This family represents a conserved domain which is found in a number of eukaryotic proteins including CED-12, ELMO I and ELMO II. ELMO1 is a component of signalling pathways that regulate phagocytosis and cell migration and is the mammalian orthologue of the C. elegans gene, ced-12. CED-12 is required for the engulfment of dying cells and cell migration. In mammalian cells, ELMO1 interacts with Dock180 as part of the CrkII/Dock180/Rac pathway responsible for phagocytosis and cell migration. ELMO1 is ubiquitously expressed, although its expression is highest in the spleen, an organ rich in immune cells. ELMO1 has a PH domain and a polyproline sequence motif at its C terminus which are not present in this alignment. Length = 170

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	272
KOG2998	302	consensus Uncharacterized conserved protein [Funct	100.0
PF04727	170	ELMO_CED12: ELMO/CED-12 family; InterPro: IPR00681	100.0
KOG2999	713	consensus Regulator of Rac1, required for phagocyt	99.97

>KOG2998 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=5.6e-66  Score=467.52  Aligned_cols=260  Identities=51%  Similarity=0.804  Sum_probs=242.9

Q ss_pred             CCCCCCceeEEe-ecccCCCCCCCCCCCccchhccchhhhcc-----cccccccccCCCCCCCCCCCCHHHHHHHHHHHh
Q 024106            1 MDERGGSFVAVR-RISQGLDRGNTCHSTSAEVVAGSAAWLGR-----GLSCVCAQRRESDPRPSFDLTPAQEECLQRLQL   74 (272)
Q Consensus         1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~c~~~~~~~~~~~~~~~L~~~Q~~~l~~L~~   74 (272)
                      |++..|..++|+ +.|.+......-+.++.+...|+.+|+++     ++.|.+...+......|..+.+.+.+.++.+++
T Consensus        37 ~~~~~g~~ra~~~e~sl~~~~~~~~~~ass~~~~~~~~~~~~v~~~~~i~~~~~~~r~~~~~~~~~~~~~~~~l~~~~e~  116 (302)
T KOG2998|consen   37 TDAYEGASRAVRTETSLGQEKPLLGSTASSEAPPGLISFLGRVMVDKGIKNIVDPNRRIDLAACRHLIPGYRELLQRLEE  116 (302)
T ss_pred             hcCCCCCcceeecchhhhhhhhhhhcccccccChhhhhhhHHHHHHhccccCCCcccchhhhhccccccCcHHHHHHHHH
Confidence            578899999999 78888888888888899999999999999     899999999999999999999999999999999


Q ss_pred             hhccccCCCCHHHHHHHHHHHHHhCCCcccccchhhhHhHhccCCCCCCCCCCcchhhhHhhHHHHHhhCcHHHHHHHHh
Q 024106           75 RIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRK  154 (272)
Q Consensus        75 ~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~~~~~~~~Wk~lGFQg~dP~tDFRg~G~LgL~~LlyF~~~~~~~~~~ll~~  154 (272)
                      ++++|||.+|++|+++|.+||+.++|+++++++++++|++|||||+||+|||||+|+|||+||+||+++||+.+++++.+
T Consensus       117 ~~~~~yDs~n~~H~e~L~~lwk~~~p~~~l~~lvs~qW~emGfQG~dPsTDFRG~GfL~LeNLlyFa~~~~~~aq~lL~~  196 (302)
T KOG2998|consen  117 LRQEPYDSDNPDHEELLLDLWKLLYPDKELPGLVSKQWKEMGFQGADPSTDFRGMGFLGLENLLYFARTYPTSAQRLLLK  196 (302)
T ss_pred             HHhccCCCCChhHHHHHHHHHHHhCCCCccchhHHHHHHHhccCCCCCCcccccchHHHHHHHHHHHHhhhHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCCCcchHHHHHHHHHHHHHHHhhhhhccccccCCccccccchhhccccchhhHHHHHHHHHHHHHHHHHhCCCC
Q 024106          155 QEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRAS  234 (272)
Q Consensus       155 q~s~~~~~~yPfAvasINiT~~L~~~L~~~~~~~~~~~k~~~~~~~~F~~ll~~~~~~F~eLy~~~f~~f~~~W~~~~at  234 (272)
                      |.  ++.|+|||||||||||+|++++|++++.     .++.+....+|     +++.+|+.|||++|..||++|+++++|
T Consensus       197 s~--~~r~eYpfAVvgINIT~m~~qmL~~eal-----~~~~~~~~~~~-----~~~~~F~~lYc~af~~~d~~Wl~~~~s  264 (302)
T KOG2998|consen  197 SR--HPRWEYPFAVVGINITFMAIQMLDLEAL-----KKHFNNIVKVF-----ETEPAFDLLYCYAFLEFDKQWLEQRAT  264 (302)
T ss_pred             cC--CCccCCceEEEeecHHHHHHHHHHhhhc-----ccccccccccc-----ccHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            75  5669999999999999999999999984     24444444444     788899999999999999999999999


Q ss_pred             cccHHHHHHHHHHHHHHhhcccCcCCCCCCCccccccC
Q 024106          235 YMDFNTVMKSTRRQLERELLLEDVTRLEDLPSYSLLSR  272 (272)
Q Consensus       235 ~mdF~~Vl~~~r~qL~r~L~~~~v~~v~d~~~~~~~~~  272 (272)
                      |||||.|++++|.|++++|++.|+..++|+|+|++|.+
T Consensus       265 imefn~Vlk~~~~qler~L~~~d~~~~~~lp~~~~L~~  302 (302)
T KOG2998|consen  265 IMEFNTVLKSFRRQLERELSLDDVLLITDLPAFNLLLQ  302 (302)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhhhcccccchhhhhhcC
Confidence            99999999999999999999999999999999999964

>PF04727 ELMO_CED12: ELMO/CED-12 family; InterPro: IPR006816 This entry represents the ELMO (EnguLfment and Cell MOtility) domain, which is found in a number of eukaryotic proteins involved in the cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility, including CED-12, ELMO-1 and ELMO-2

Probab=100.00  E-value=5.6e-49  Score=336.33  Aligned_cols=168  Identities=43%  Similarity=0.761  Sum_probs=150.2

Q ss_pred             HHHHHHhhhccccCCCCHHHHHHHHHHHHHhCCCcccccchhhhHhHhccCCCCCCCCCCcchhhhHhhHHHHHhhCcHH
Q 024106           68 CLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKS  147 (272)
Q Consensus        68 ~l~~L~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~~~~~~~~Wk~lGFQg~dP~tDFRg~G~LgL~~LlyF~~~~~~~  147 (272)
                      .|+.|++++++|||++|++|+++|++||++++++.+.+++.+++|++|||||+||+|||||+|+|||+||+||+++||+.
T Consensus         2 ~l~~l~~~~~~~~d~~~~~h~~~L~~Lw~~~~~~~~~~~~~~~~W~~lGFQ~~dP~tDFR~~G~LgL~~L~yf~~~~~~~   81 (170)
T PF04727_consen    2 TLNLLRALAKTPFDPENPEHEELLQELWNALFPDEPPFSRISEHWKELGFQGEDPATDFRGMGLLGLDCLLYFAENYPDE   81 (170)
T ss_pred             hHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhCCCCccCCcCccHHHHhCCCCCCcHHHHhhhhHHHHHHHHHHHHHChHH
Confidence            57889999999999999999999999999999998888999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCCCCcchHHHHHHHHHHHHHHHhhhhhccccccCCccccccchhhc-cccchhhHHHHHHHHHHHHHH
Q 024106          148 FQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLKF-LSENESAFDLLYCITFKLMDH  226 (272)
Q Consensus       148 ~~~ll~~q~s~~~~~~yPfAvasINiT~~L~~~L~~~~~~~~~~~k~~~~~~~~F~~l-l~~~~~~F~eLy~~~f~~f~~  226 (272)
                      +++|+.++.++.+..+||||+||||||.+|+++|+++..      .+.  ....+... +.+.+.+|++|||++|..|++
T Consensus        82 ~~~~l~~~~~~~~~~~~Pfa~~~invt~~l~~~l~~~~~------~~~--~~~~~~~~~~~~~~~~f~elf~~~f~~f~~  153 (170)
T PF04727_consen   82 FRRILREQSSRSDENWYPFAVASINVTSLLCELLKLGAL------DSE--FYKRINFLSFFSSLEAFEELFCACFQLFDR  153 (170)
T ss_pred             HHHHHHHccCcccccccHHHHHHHHHHHHHHHHHhhccc------CHH--HhhcccccccCccHHHHHHHHHHHHHHHHH
Confidence            999999988766667999999999999999999999762      111  11122222 556788999999999999999


Q ss_pred             HHHhCCCCcccHHHHHH
Q 024106          227 QWLAMRASYMDFNTVMK  243 (272)
Q Consensus       227 ~W~~~~at~mdF~~Vl~  243 (272)
                      +|+++++++|||++|++
T Consensus       154 ~W~~~~at~~dF~~V~~  170 (170)
T PF04727_consen  154 TWKEMNATIMDFNKVLK  170 (170)
T ss_pred             HHccCCCCHHHHHhhcC
Confidence            99999999999999975

ELMO-1 and ELMO-2 are components of signalling pathways that regulate phagocytosis and cell migration and are mammalian orthologues of the Caenorhabditis elegans gene, ced-12 that is required for the engulfment of dying cells and cell migration. ELMO-1/2 act in association with DOCK1 and CRK. ELMO-1/2 interact with the SH3-domain of DOCK1 via an SH3-binding site to enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1. ELMO-1/2 could be part of a complex with DOCK1 and Rac1 that could be required to activate Rac Rho small GTPases. Regulatory GTPases in the Ras superfamily employ a cycle of alternating GTP binding and hydrolysis, controlled by guanine nucleotide exchange factors and GTPase-activating proteins (GAPs), as essential features of their actions in cells. Within the Ras superfamily, the Arf family is composed of 30 members, including 22 Arf-like (Arl) proteins. The ELMO domain has been proposed to be a GAP domain for ARL2 and other members of the Arf family [].; GO: 0006909 phagocytosis, 0005856 cytoskeleton

>KOG2999 consensus Regulator of Rac1, required for phagocytosis and cell migration [Signal transduction mechanisms]

Probab=99.97  E-value=2.2e-32  Score=264.45  Aligned_cols=198  Identities=27%  Similarity=0.505  Sum_probs=181.6

Q ss_pred             CCCCHHHHHHHHHHHhhhccccCCCCHHHHHHHHHHHHHhCCCccc-----------ccchhhhHhHhccCC-CCCCCCC
Q 024106           59 FDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEEL-----------RDLISEQWKEMGWQG-KDPSTDF  126 (272)
Q Consensus        59 ~~L~~~Q~~~l~~L~~~~~~~~d~~~~~H~~~L~~Lw~~~~~~~~~-----------~~~~~~~Wk~lGFQg-~dP~tDF  126 (272)
                      .+|+.+|...+..+..|+.++.|+.+.+.++.++++-..+|.++..           .....+..|++||.. .||+.||
T Consensus       276 ~~lyvlq~L~~glle~Rm~~~md~~~q~qr~~i~~lr~iaf~~~~~~~~~g~~~e~rk~l~~~~ykklgf~n~~npa~df  355 (713)
T KOG2999|consen  276 IQLYVLQVLTLGLLEVRMRTKMDPQDQVQRELISELRRIAFDDESEPSRRGGGAEVRKILDIESYKKLGFENRINPAQDF  355 (713)
T ss_pred             HHHHHHHHHHHhhhHHhhhcccchhhHHHHHHHHHHHhcCcccccccccCCcchhhhhhhhHHHHHhhcccccCChHHhc
Confidence            5899999999999999999999999999999999999999976422           245678999999999 8999999


Q ss_pred             C--cchhhhHhhHHHHHhhCcHHHHHHHHhhcCCCCCCCcchHHHHHHHHHHHHHHHhhhhhccccccCCccccccchhh
Q 024106          127 R--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNFTVKPRTMVGATFLK  204 (272)
Q Consensus       127 R--g~G~LgL~~LlyF~~~~~~~~~~ll~~q~s~~~~~~yPfAvasINiT~~L~~~L~~~~~~~~~~~k~~~~~~~~F~~  204 (272)
                      -  .+|+|+|.||+||+++||+.+.+++.+++++.++++|||+..+|.+|.|||++|++++.        ++.....|.|
T Consensus       356 ~etppG~LAldnMvyFA~~~~~~y~riVlENSsRedkhecpfgr~sieltk~lcEilrVge~--------p~E~~~df~p  427 (713)
T KOG2999|consen  356 GETPPGRLALDNMVYFARNSPQDYRRIVLENSSREDKHECPFGRMSIELTKILCELLRVGEP--------PDELDRDFIP  427 (713)
T ss_pred             ccCCchHHHHHHHHHHHHhCHHHHHHHHHhcccccccCcCCcCccHHHHHHHHHHHHhcCCC--------chhhcCccce
Confidence            6  78999999999999999999999999999999999999999999999999999999983        3445567999


Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHHhCCCCcccHHHHHHHHHHHHHHhhcccCcCCCCCCC
Q 024106          205 FLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELLLEDVTRLEDLP  265 (272)
Q Consensus       205 ll~~~~~~F~eLy~~~f~~f~~~W~~~~at~mdF~~Vl~~~r~qL~r~L~~~~v~~v~d~~  265 (272)
                      +||.++..|+++||+|.++|+++|++|+||-.||++|+++||+||.|+|..+ .++++++-
T Consensus       428 mfFthd~~Fee~FciciqLlnkTWKEMrAt~edf~KVmqVVrEQl~r~L~~k-p~sld~fk  487 (713)
T KOG2999|consen  428 MFFTHDTPFEELFCICVQLLNRTWKEMRATAEDFEKVMQVVREQLRRALKRK-PQSLDQFK  487 (713)
T ss_pred             eeecCCCcHHHHHHHHHHHHHhHHHHHHhhhhhHHHHHHHHHHHHHHHhccC-CccHHHHH
Confidence            9999999999999999999999999999999999999999999999999876 77766543

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	272
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.2 bits (111), Expect = 3e-06
 Identities = 41/257 (15%), Positives = 76/257 (29%), Gaps = 55/257 (21%)

Query: 39  LGRGLSCVCAQRRESDPRPSFDLTPAQEECLQRLQLRIDVAYDSSIPEHREALRAL---W 95
           L   +      R +        +   Q E L+RL              +   L  L    
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRIHSIQAE-LRRLLKS---------KPYENCLLVLLNVQ 254

Query: 96  NA----AFPDEELRDLISEQWKE-----MGWQGKDPSTDFRGGGFISLENLLYLARNFPK 146
           NA    AF +   + L++ ++K+             S D         E    L +    
Sbjct: 255 NAKAWNAF-NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDC 313

Query: 147 SFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAACFNF----TVKPRTMVGATF 202
             QD L ++    +    P  ++      ++ + +    A ++          T +  + 
Sbjct: 314 RPQD-LPREVLTTN----PRRLS------IIAESIRDGLATWDNWKHVNCDKLTTIIESS 362

Query: 203 LKFLSENE--SAFDLLYC------ITFKLMDHQWLAMRASYMDFNTVMKSTRRQLERELL 254
           L  L   E    FD L        I   L+   W       +  + VM     +L +  L
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIW-----FDVIKSDVMVVV-NKLHKYSL 416

Query: 255 LEDVTRLEDLPSYSLLS 271
           +E   +     + S+ S
Sbjct: 417 VE---KQPKESTISIPS 430

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00