Citrus Sinensis ID: 024155

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-
Protein Sequence
MASLVAALGLPSKLKASPYEQQNALFVSRRRSKKKNQSFSPVARLFGPAIFEASKLKVLFLGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEALVWVYFHSNIPEFNKVECWGPLKEAVAGSSEAGGTRHEIRQETSISNWELPEPCQETCNCCFPPMSLIPWSEKLPLQTENRGTQGQESLQQQTR
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccEEEEccccccccccccHHHHcccccccccccEEEEcccccccccccccccEEEccccccccEEEEEcccccHHHHHcccccccHHHEEEEEEEcccEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccccccccccEEEEEEEcccccccEEEEccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccEEEHcccccccccccccccccccccccccccccccccHHHHHcccccccHcHEEEEEEcccccccccccccEEEEEcccccccEEEEEcHHHcHHHHHHHHHHHHHHHHHHEEEcccccEEEEEEEEEccccHHHHHHHHHHHHHHHHHcHHHHHHHHHccHHHHHHcHHHccccEEEEEEccccccccEEccccHHHHccccccccccccHHcHcccccccccccccccccccccccccccccccccccccccccccccccHHHHcc
Coil and Loop (DISEMBL)
MASLVAalglpsklkaspyeqQNALFVSRrrskkknqsfspvarlfgpaifEASKLKVLFLgvdeekhpgklprtytlthsdiTSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVhgdgnllnnhpELQEALVWVYFHsnipefnkvecwgplkeavagsseaggtrheirqetsisnwelpepcqetcnccfppmslipwseklplqtenrgtqgqESLQQQTR
Flexible Loop (DISEMBL)
MASLVAAlglpsklkaspyeqqnalfvsrrrskkknqsfspvarlfgpAIFEASKLKVLFLGVDEekhpgklprtytlthSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEALVWVYFHSNIPEFNKVECWGPLKEAVagsseaggtrHEIRQETsisnwelpePCQETCNCCFPPMSLIPWSEKLPLQTEnrgtqgqeslqqqtr
Low Complexity Region (SEG)
MASLVAALGLPSKLKASPYEQQNALFVSRRRSKKKNQSFSPVARLFGPAIFEASKLKVLFLGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEALVWVYFHSNIPEFNKVECWGPLKEAVAGSSEAGGTRHEIRQETSISNWELPEPCQETCNCCFPPMSLIPWSEKLPLQTENRGTQGQESLQQQTR
Disordered region (IsUnstruct)
*****************************************VARLFGPAIFEASKLKVLFLGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEALVWVYFHSNIPEFNKVECWGPLKEAV******************ISNWELPEPCQETCNCCFPPMSLIPWS***********************
Disordered Region (DISOPRED)
*************************************SFSPVARLFGPAIFEASKLKVLFLGVD*****GKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEALVWVYFHSNIPEFNKVECWGPLKEA****************************CQETCNCCFPPMSLIPWS***********************
Disordered Region (DISEMBL)
MASLVAALGLPSKLKASPYEQQNALFV***********FSPVARLFGPAIFEASKLKVLFLGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEALVWVYFHSNIPEFNKVECWGPLKEA****************ETSISNWELPEPCQETCNCCFPPMSLIPWSEKLPLQ*****************
Disordered Region (DISPRO)
*ASLVAALGLPSKLKAS*****NAL*VSR******NQSFSPVARLFGPAIFEASKLKVLFLGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEALVWVYFHSNIPEFNKVECWGPLKEAVA********************WELPEPCQETCNCCFPPMSLIPWSEK*********************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASLVAALGLPSKLKASPYEQQNALFVSRRRSKKKNQSFSPVARLFGPAIFEASKLKVLFLGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEALVWVYFHSNIPEFNKVECWGPLKEAVAGSSEAGGTRHEIRQETSISNWELPEPCQETCNCCFPPMSLIPWSEKLPLQTENRGTQGQESLQQQTR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	271
255537227	273	conserved hypothetical protein [Ricinus	0.996	0.989	0.757	1e-117
224074768	269	predicted protein [Populus trichocarpa]	0.940	0.947	0.750	1e-111
224054003	270	predicted protein [Populus trichocarpa]	0.985	0.988	0.722	1e-108
162568912	267	putative staygreen protein [Nicotiana ta	0.966	0.981	0.738	1e-107
225426733	274	PREDICTED: uncharacterized protein LOC10	0.981	0.970	0.726	1e-105
147835368	274	hypothetical protein VITISV_009841 [Viti	0.981	0.970	0.723	1e-105
162135178	266	stay green protein [Capsicum annuum] gi|	0.963	0.981	0.727	1e-104
350535753	272	senescence-inducible chloroplast stay-gr	0.977	0.974	0.729	1e-104
255637385	271	unknown [Glycine max]	0.970	0.970	0.711	1e-102
351721214	271	senescence-inducible chloroplast stay-gr	0.970	0.970	0.711	1e-102

>gi|255537227|ref|XP_002509680.1| conserved hypothetical protein [Ricinus communis] gi|223549579|gb|EEF51067.1| conserved hypothetical protein [Ricinus communis]

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 206/272 (75%), Positives = 229/272 (84%), Gaps = 2/272 (0%)

Query: 1   MASLVAALGLPSKLKASPYEQQNALFVSRRRSKKKNQSFSPVARLFGPAIFEASKLKVLF 60
           M SL     + SK ++S +EQ N+LF S+R+ KK+N SFSPVARLFGP+IFEASKLKVLF
Sbjct: 1   MGSLAIVPLVLSKPRSSVFEQNNSLFPSKRKFKKRNLSFSPVARLFGPSIFEASKLKVLF 60

Query: 61  LGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVK 120
           +GVDE+KHPGKLPRTYTLTHSD+T+KLTLAISQTINNSQLQGWYN+L RDEVVAEWKKVK
Sbjct: 61  VGVDEKKHPGKLPRTYTLTHSDVTAKLTLAISQTINNSQLQGWYNKLYRDEVVAEWKKVK 120

Query: 121 GKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEALVW 180
            KMSLHVHCHISGGHFLLD+CARLR+FIF KELPVVLKAFVHGDGNL NN+PELQEALVW
Sbjct: 121 EKMSLHVHCHISGGHFLLDLCARLRYFIFCKELPVVLKAFVHGDGNLFNNYPELQEALVW 180

Query: 181 VYFHSNIPEFNKVECWGPLKEAVAGSSEAGGTRHEIRQ-ETSISNWELPEPCQETCNCCF 239
           VYFHSNIPEFN+VECWGPLKEA A SS   G  HE  Q ET  SNW+LPEPCQE C CCF
Sbjct: 181 VYFHSNIPEFNRVECWGPLKEAAAPSSGVYGLPHESNQRETPASNWDLPEPCQENCECCF 240

Query: 240 PPMSLIPWSEKLPLQTENRGTQGQESLQQQTR 271
           PPMS IPWS+K P+ TEN     Q  +QQ  +
Sbjct: 241 PPMSAIPWSQKAPVDTEN-SKGAQNGIQQAAQ 271

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224074768|ref|XP_002304454.1| predicted protein [Populus trichocarpa] gi|222841886|gb|EEE79433.1| predicted protein [Populus trichocarpa]

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 193/257 (75%), Positives = 219/257 (85%), Gaps = 2/257 (0%)

Query: 1   MASLVAALGLPSKLKASPYEQQNALFVSRRRSKKKNQSFSPVARLFGPAIFEASKLKVLF 60
           M SL  A  LP KL+ S ++Q ++LF S+++ K+KNQS SPVARLFGP+IFEASKLKVLF
Sbjct: 1   MGSLAVAPFLPLKLRPSIFDQNSSLFPSKKKLKRKNQSISPVARLFGPSIFEASKLKVLF 60

Query: 61  LGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVK 120
           LGVDE+KHPG LPRTYTLTHSDIT+KLTLAISQTINNSQLQGW N+L RDEVVAEWKKVK
Sbjct: 61  LGVDEKKHPGNLPRTYTLTHSDITAKLTLAISQTINNSQLQGWSNKLYRDEVVAEWKKVK 120

Query: 121 GKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEALVW 180
           GKMSLHVHCHISGGHFLLD+C RLR+FIF KELPVVLKAF HGDGNL +++PELQEALVW
Sbjct: 121 GKMSLHVHCHISGGHFLLDLCCRLRYFIFRKELPVVLKAFFHGDGNLFSSYPELQEALVW 180

Query: 181 VYFHSNIPEFNKVECWGPLKEAVAGSSEAGGTRHEIRQETSISNWELPEPCQETCNCCFP 240
           VYFHSNIPEFNKVECWGPLK+A A  +   G   E +++   SNW LPEPCQE C CCFP
Sbjct: 181 VYFHSNIPEFNKVECWGPLKDAAAPCTAESGGPTENKEQA--SNWNLPEPCQENCKCCFP 238

Query: 241 PMSLIPWSEKLPLQTEN 257
           PMSLIPWSE +P + +N
Sbjct: 239 PMSLIPWSEMVPQENKN 255

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054003|ref|XP_002298080.1| predicted protein [Populus trichocarpa] gi|222845338|gb|EEE82885.1| predicted protein [Populus trichocarpa]

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 195/270 (72%), Positives = 223/270 (82%), Gaps = 3/270 (1%)

Query: 1   MASLVAALGLPSKLKASPYEQQNALFVSRRRSKKKNQSFSPVARLFGPAIFEASKLKVLF 60
           M SL  A  LPSK + S ++Q ++LF S  + K+KNQS SPVARLFGP+IFEASKLKVLF
Sbjct: 1   MGSLAVAPFLPSKPRPSLFDQNSSLFSSSTKLKRKNQSISPVARLFGPSIFEASKLKVLF 60

Query: 61  LGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVK 120
           LGVDE+KHPG LPRTYTLTHSD+T+KLTLAISQTINNSQLQGW N+L RDEVVAEWKKVK
Sbjct: 61  LGVDEKKHPGNLPRTYTLTHSDMTAKLTLAISQTINNSQLQGWSNKLYRDEVVAEWKKVK 120

Query: 121 GKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEALVW 180
           G MSLHVHCHISGGHFLLD C RLR+FIF +ELPVVLKAF HGDG+LL+++PELQEALVW
Sbjct: 121 GNMSLHVHCHISGGHFLLDWCCRLRYFIFRRELPVVLKAFFHGDGSLLSSYPELQEALVW 180

Query: 181 VYFHSNIPEFNKVECWGPLKEAVAGS-SEAGGTRHEIRQETSISNWELPEPCQ-ETCNCC 238
           VYFHSNIPEF+KVECWGPLK+A A S SE GG+          SNW+LPEPCQ E C+CC
Sbjct: 181 VYFHSNIPEFSKVECWGPLKDAAAPSTSETGGSNETEELANQSSNWDLPEPCQEENCSCC 240

Query: 239 FPPMSLIPWSEKLPLQTENRGTQGQESLQQ 268
           FPPMSLIPWS+ +PL+ +   +  Q S QQ
Sbjct: 241 FPPMSLIPWSKMVPLENKKNPSTPQ-SFQQ 269

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|162568912|gb|ABY19382.1| putative staygreen protein [Nicotiana tabacum]

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 201/272 (73%), Positives = 225/272 (82%), Gaps = 10/272 (3%)

Query: 1   MASLVAALGLPSKLKASPYEQQNALFVSR-RRSKKKNQSFSPVARLFGPAIFEASKLKVL 59
           M +L  +L +PSKL     E+Q+++F+ + RR   KNQS  PVARLFGPAIFEASKLKVL
Sbjct: 1   MGTLTTSLAVPSKLNP---EKQSSIFIYKTRRKSNKNQSIVPVARLFGPAIFEASKLKVL 57

Query: 60  FLGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKV 119
           FLGVDE+KHPGK PRTYTLTHSD+TSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKV
Sbjct: 58  FLGVDEKKHPGKRPRTYTLTHSDVTSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKV 117

Query: 120 KGKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEALV 179
           KGKMSLHVHCHISGGHFLLD+ ARLR++IF KELPVVLKAFVHGD NLLNN+PELQEALV
Sbjct: 118 KGKMSLHVHCHISGGHFLLDLFARLRYYIFCKELPVVLKAFVHGDKNLLNNYPELQEALV 177

Query: 180 WVYFHSNIPEFNKVECWGPLKEAVAGSSEAGGTRHEIR--QETSISNWELPEPCQETCNC 237
           WVYFHSNI EFNKVECWGPLKEA A  S +GG   ++R    TS SNW+LP+PCQE+C+C
Sbjct: 178 WVYFHSNIQEFNKVECWGPLKEA-ASPSSSGGVGGKMRNTNTTSNSNWDLPQPCQESCSC 236

Query: 238 CFPPMSLIPWSEKLPLQTENRGTQGQESLQQQ 269
           CFPPMSLIPW       T+    QG   LQ+Q
Sbjct: 237 CFPPMSLIPWPSDDISGTDGGPIQG---LQEQ 265

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426733|ref|XP_002282183.1| PREDICTED: uncharacterized protein LOC100265112 [Vitis vinifera]

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/278 (72%), Positives = 222/278 (79%), Gaps = 12/278 (4%)

Query: 1   MASLVAALGLPSKLKASPYEQQNALFVSRRRSKKKNQSFSPVARLFGPAIFEASKLKVLF 60
           MA+L AAL LPS+LK S    Q +LFV RRR KK + +F PVARLFGPAIFEASKLKVLF
Sbjct: 1   MATLTAALVLPSELKPSFSPHQRSLFVCRRRPKKSHPAF-PVARLFGPAIFEASKLKVLF 59

Query: 61  LGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVK 120
           LGVDE+KHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGW NRLQRDEVVAEWKKVK
Sbjct: 60  LGVDEKKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWSNRLQRDEVVAEWKKVK 119

Query: 121 GKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEALVW 180
            +MSLHVHCHISGGHFLLD+CA+LR+FIF KELPVVLKAFVHGDGNLLNN+PELQEALVW
Sbjct: 120 DQMSLHVHCHISGGHFLLDLCAKLRYFIFCKELPVVLKAFVHGDGNLLNNYPELQEALVW 179

Query: 181 VYFHSNIPEFNKVECWGPLKEAVAGSSEAGG-------TRHEIRQETSISNWELP-EPCQ 232
           VYFHSN+PEFN+VECWG L  A A    A G          ++RQ    S WE P EPC 
Sbjct: 180 VYFHSNLPEFNRVECWGALNNAAAPPPPAAGAGGGRVEAHQDMRQVEPSSKWERPEEPCI 239

Query: 233 ETCNCCFPPMSLIPWSEKLPLQTENRGTQGQESLQQQT 270
           E C CCFPPMSLIPWS+ L  +  +   +G   L+QQT
Sbjct: 240 ENCTCCFPPMSLIPWSQDLAHENIHDTQKG---LRQQT 274

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147835368|emb|CAN63364.1| hypothetical protein VITISV_009841 [Vitis vinifera]

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/278 (72%), Positives = 221/278 (79%), Gaps = 12/278 (4%)

Query: 1   MASLVAALGLPSKLKASPYEQQNALFVSRRRSKKKNQSFSPVARLFGPAIFEASKLKVLF 60
           MA+L AAL LPS+LK S    Q +LFV RRR KK + +F PVARLFGPAIFEASKLKVLF
Sbjct: 1   MATLTAALVLPSELKPSFSXHQXSLFVCRRRPKKSHPAF-PVARLFGPAIFEASKLKVLF 59

Query: 61  LGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVK 120
           LGVDE+KHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGW NRLQRDEVVAZWKKVK
Sbjct: 60  LGVDEKKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWSNRLQRDEVVAZWKKVK 119

Query: 121 GKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEALVW 180
            +MSLHVHCHISGGHFLLD+CA+LR+FIF KELPVVLKAFVHGDGNLLNN+PELQEALVW
Sbjct: 120 DQMSLHVHCHISGGHFLLDLCAKLRYFIFCKELPVVLKAFVHGDGNLLNNYPELQEALVW 179

Query: 181 VYFHSNIPEFNKVECWGPLKEAVAGSSEAGG-------TRHEIRQETSISNWELP-EPCQ 232
           VYFHSN+PEFN+VECWG L  A A    A G          ++RQ    S WE P EPC 
Sbjct: 180 VYFHSNLPEFNRVECWGALNNAAAPPPPAAGGGGGRVEAHQDMRQVEPSSKWERPEEPCX 239

Query: 233 ETCNCCFPPMSLIPWSEKLPLQTENRGTQGQESLQQQT 270
           E C CCFPPMSLIPWS+ L  +  +   +G   L QQT
Sbjct: 240 ENCTCCFPPMSLIPWSQDLAHENIHDTQKG---LXQQT 274

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|162135178|gb|ABX82698.1| stay green protein [Capsicum annuum] gi|170947249|emb|CAN88917.2| chlorophyll retainer (stay green) [Capsicum annuum] gi|171903868|gb|ACB56586.1| chlorophyll retainer [Capsicum annuum]

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 198/272 (72%), Positives = 218/272 (80%), Gaps = 11/272 (4%)

Query: 1   MASLVAALGLPSKLKASPYEQQNALFVSR-RRSKKKNQSFSPVARLFGPAIFEASKLKVL 59
           M +L A+L  PSKL     E+ ++LFV + RR   KNQS  PVARLFGPAIFEASKLKVL
Sbjct: 1   MGTLTASLVAPSKLNP---EKHSSLFVYKTRRKSHKNQSIVPVARLFGPAIFEASKLKVL 57

Query: 60  FLGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKV 119
           FLGVDE+KHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKV
Sbjct: 58  FLGVDEKKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKV 117

Query: 120 KGKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEALV 179
           KGKMSLHVHCHISGGHF+LD+ ARLR++IF KELPVVLKAFVHGD NLL N+PELQ+ALV
Sbjct: 118 KGKMSLHVHCHISGGHFMLDLFARLRYYIFCKELPVVLKAFVHGDENLLKNYPELQQALV 177

Query: 180 WVYFHSNIPEFNKVECWGPLKEAVAGSSEAGGTRHEIRQETSISN--WELPEPCQETCNC 237
           WVYFHSNI EFNKVECWGPLK+A A  S +G         TS SN  W LP+PC+ETC C
Sbjct: 178 WVYFHSNIQEFNKVECWGPLKDA-ASPSSSGVGGGMNTSFTSNSNIKWNLPKPCEETCTC 236

Query: 238 CFPPMSLIPWSEKLPLQTENRGTQGQESLQQQ 269
           CFPPMS+IPW    P  T       Q+ LQ+Q
Sbjct: 237 CFPPMSVIPW----PSTTNVENGTIQQGLQEQ 264

Source: Capsicum annuum

Species: Capsicum annuum

Genus: Capsicum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350535753|ref|NP_001234723.1| senescence-inducible chloroplast stay-green protein 1 [Solanum lycopersicum] gi|68510418|gb|AAY98500.1| senescence-inducible chloroplast stay-green protein 1 [Solanum lycopersicum] gi|171903870|gb|ACB56587.1| green flesh protein [Solanum lycopersicum] gi|257480000|gb|ACV60215.1| green flesh protein [Solanum lycopersicum]

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 200/274 (72%), Positives = 223/274 (81%), Gaps = 9/274 (3%)

Query: 1   MASLVAALGLPSKLKASPYEQQNALFVSRRRSK-KKNQSFSPVARLFGPAIFEASKLKVL 59
           M +L  +L +PSKL     EQQ+++F+ + R K KKNQS  PVARLFGPAIFEASKLKVL
Sbjct: 1   MGTLTTSLVVPSKLNN---EQQSSIFIHKTRRKCKKNQSIVPVARLFGPAIFEASKLKVL 57

Query: 60  FLGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKV 119
           FLGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKV
Sbjct: 58  FLGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKV 117

Query: 120 KGKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEALV 179
           KGKMSLHVHCHISGGHF+LD+ ARLR +IF KELPVVLKAFVHGD NLL N+PELQEALV
Sbjct: 118 KGKMSLHVHCHISGGHFMLDLFARLRNYIFCKELPVVLKAFVHGDENLLRNYPELQEALV 177

Query: 180 WVYFHSNIPEFNKVECWGPLKEAVA-GSSEAGGTRHEIRQETSISN--WELPEPCQETCN 236
           WVYFHSNI EFNKVECWGPL++A +  SS  G    +    TS SN  WELP+PC+E C 
Sbjct: 178 WVYFHSNIQEFNKVECWGPLRDATSPSSSSGGVGGVKSTSFTSNSNKKWELPKPCEEACA 237

Query: 237 CCFPPMSLIPW-SEKLPLQTENRGTQGQESLQQQ 269
           CCFPP+S++PW S  L    E  GT  Q+ LQ+Q
Sbjct: 238 CCFPPVSVMPWLSSNLDGVGEENGTI-QQGLQEQ 270

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637385|gb|ACU19021.1| unknown [Glycine max]

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 195/274 (71%), Positives = 217/274 (79%), Gaps = 11/274 (4%)

Query: 1   MASLVAALGLPSKL-KASPYEQQNALF-VSRRRSKKKNQSFSPVARLFGPAIFEASKLKV 58
           M +L     LPSKL K S   + N+LF    RR  KKN++  PVARLFGPAIFEASKLKV
Sbjct: 1   MGTLTTVPVLPSKLNKPSLSPRHNSLFPYYGRRVGKKNKAMVPVARLFGPAIFEASKLKV 60

Query: 59  LFLGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKK 118
           LFLGVDE KHPG LPRTYTLTHSDIT+KLTLAISQTINNSQLQGWYNRLQRDEVVA+WKK
Sbjct: 61  LFLGVDENKHPGNLPRTYTLTHSDITAKLTLAISQTINNSQLQGWYNRLQRDEVVAQWKK 120

Query: 119 VKGKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEAL 178
           VKGKMSLHVHCHISGGHFLLDI ARLR+FIF KELPVVLKA VHGD NL NN+PELQ+AL
Sbjct: 121 VKGKMSLHVHCHISGGHFLLDILARLRYFIFCKELPVVLKAVVHGDENLFNNYPELQDAL 180

Query: 179 VWVYFHSNIPEFNKVECWGPLKEAVAGSSEAGGTRHEIRQETSIS--NWELPEPCQETCN 236
           VWVYFHSNIPEFNKVECWGPLKEA   S+  GG + E  QET +S     +P+PCQE C 
Sbjct: 181 VWVYFHSNIPEFNKVECWGPLKEA---SAPIGGAKEESEQETFLSKEGLAIPQPCQEECE 237

Query: 237 CCFPPMSLIP--WSEKLPLQTEN--RGTQGQESL 266
           CCFPP++L P  WS+++P        G + Q+SL
Sbjct: 238 CCFPPLTLSPIQWSQQVPSHHYEPCDGIETQQSL 271

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721214|ref|NP_001236690.1| senescence-inducible chloroplast stay-green protein 2 [Glycine max] gi|58866293|gb|AAW82960.1| senescence-inducible chloroplast stay-green protein 2 [Glycine max]

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 195/274 (71%), Positives = 217/274 (79%), Gaps = 11/274 (4%)

Query: 1   MASLVAALGLPSKL-KASPYEQQNALF-VSRRRSKKKNQSFSPVARLFGPAIFEASKLKV 58
           M +L     LPSKL K S   + N+LF    RR  KKN++  PVARLFGPAIFEASKLKV
Sbjct: 1   MGTLTTVPVLPSKLNKPSLSPRHNSLFPYYGRRVGKKNKAMVPVARLFGPAIFEASKLKV 60

Query: 59  LFLGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKK 118
           LFLGVDE KHPG LPRTYTLTHSDIT+KLTLAISQTINNSQLQGWYNRLQRDEVVA+WKK
Sbjct: 61  LFLGVDENKHPGNLPRTYTLTHSDITAKLTLAISQTINNSQLQGWYNRLQRDEVVAQWKK 120

Query: 119 VKGKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEAL 178
           VKGKMSLHVHCHISGGHFLLDI ARLR+FIF KELPVVLKA VHGD NL NN+PELQ+AL
Sbjct: 121 VKGKMSLHVHCHISGGHFLLDILARLRYFIFCKELPVVLKAVVHGDENLFNNYPELQDAL 180

Query: 179 VWVYFHSNIPEFNKVECWGPLKEAVAGSSEAGGTRHEIRQETSIS--NWELPEPCQETCN 236
           VWVYFHSNIPEFNKVECWGPLKEA   S+  GG + E  QET +S     +P+PCQE C 
Sbjct: 181 VWVYFHSNIPEFNKVECWGPLKEA---SAPIGGAKEESEQETLLSKEGLAIPQPCQEECE 237

Query: 237 CCFPPMSLIP--WSEKLPLQTEN--RGTQGQESL 266
           CCFPP++L P  WS+++P        G + Q+SL
Sbjct: 238 CCFPPLTLSPIQWSQQVPSHHYEPCDGIETQQSL 271

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	271
TAIR|locus:2127153	268	NYE1 "AT4G22920" [Arabidopsis	0.911	0.921	0.7	1.3e-91
TAIR|locus:2137020	271	AT4G11910 "AT4G11910" [Arabido	0.892	0.892	0.699	1.4e-89
TAIR|locus:4515103377	273	AT4G11911 "AT4G11911" [Arabido	0.874	0.868	0.661	3.6e-82
TAIR|locus:2037154	260	AT1G44000 "AT1G44000" [Arabido	0.627	0.653	0.536	6.2e-46

TAIR|locus:2127153 NYE1 "AT4G22920" [Arabidopsis thaliana (taxid:3702)]

 Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
 Identities = 189/270 (70%), Positives = 212/270 (78%)

Query:     1 MASLVAALGLPSKLKASPYEQQN------ALFVSRRRSKKKNQSFSPVARLFGPAIFEAS 54
             M SL A + LP+KLK +  ++++      +LF + RRSKKKNQS  PVARLFGPAIFE+S
Sbjct:     1 MCSLSAIMLLPTKLKPAYSDKRSNSSSSSSLFFNNRRSKKKNQSIVPVARLFGPAIFESS 60

Query:    55 KLKVLFLGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVA 114
             KLKVLFLGVDE+KHP  LPRTYTLTHSDIT+KLTLAISQ+INNSQLQGW NRL RDEVVA
Sbjct:    61 KLKVLFLGVDEKKHPSTLPRTYTLTHSDITAKLTLAISQSINNSQLQGWANRLYRDEVVA 120

Query:   115 EWKKVKGKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPEL 174
             EWKKVKGKMSLHVHCHISGGHFLLD+ A+ R+FIF KELPVVLKAFVHGDGNLLNN+PEL
Sbjct:   121 EWKKVKGKMSLHVHCHISGGHFLLDLFAKFRYFIFCKELPVVLKAFVHGDGNLLNNYPEL 180

Query:   175 QEALVWVYFHSNIPEFNKVECWGPLKEAVAGSSEAGGTRHEIRQETSISNWELPEP-CQE 233
             QEALVWVYFHSN+ EFNKVECWGPL EAV   S  G   H  + ET      LPE  C +
Sbjct:   181 QEALVWVYFHSNVNEFNKVECWGPLWEAV---SPDG---H--KTET------LPEARCAD 226

Query:   234 TCNCCFPPMSLIPWSEKLPLQTEN--RGTQ 261
              C+CCFP +S IPWS  L  +  N   GTQ
Sbjct:   227 ECSCCFPTVSSIPWSHSLSNEGVNGYSGTQ 256

GO:0015996 "chlorophyll catabolic process" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2137020 AT4G11910 "AT4G11910" [Arabidopsis thaliana (taxid:3702)]

 Score = 894 (319.8 bits), Expect = 1.4e-89, P = 1.4e-89
 Identities = 177/253 (69%), Positives = 202/253 (79%)

Query:     1 MASLVAALGLPSKLK-ASPYE-QQNALFVSRRRSKKKNQSFSPVARLFGPAIFEASKLKV 58
             M SL   L LPSK+K   P +   ++L V+ RRSK KN+S  PVARLFGPAIFEASKLKV
Sbjct:     1 MCSLATNLLLPSKMKPVFPEKLSTSSLCVTTRRSKMKNRSIVPVARLFGPAIFEASKLKV 60

Query:    59 LFLGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKK 118
             LFLGVDE+KHP KLPRTYTLTHSDIT+KLTLAISQ+INNSQLQGW N+L RDEVV EWKK
Sbjct:    61 LFLGVDEKKHPAKLPRTYTLTHSDITAKLTLAISQSINNSQLQGWANKLFRDEVVGEWKK 120

Query:   119 VKGKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEAL 178
             VKGKMSLHVHCHISGGHF L++ A+LR++IF KELPVVL+AF HGD  LLNNHPELQE+ 
Sbjct:   121 VKGKMSLHVHCHISGGHFFLNLIAKLRYYIFCKELPVVLEAFAHGDEYLLNNHPELQESP 180

Query:   179 VWVYFHSNIPEFNKVECWGPLKEAVAGSSEAGGTRHEIRQETSISNWELPE-PCQETCNC 237
             VWVYFHSNIPE+NKVECWGPL EA++     G T H+ + ET      LPE PC + C C
Sbjct:   181 VWVYFHSNIPEYNKVECWGPLWEAMSQHQHDGRT-HK-KSET------LPELPCPDECKC 232

Query:   238 CFPPMSLIPWSEK 250
             CFP +S IPWS +
Sbjct:   233 CFPTVSTIPWSHR 245

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:4515103377 AT4G11911 "AT4G11911" [Arabidopsis thaliana (taxid:3702)]

 Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
 Identities = 166/251 (66%), Positives = 191/251 (76%)

Query:     1 MASLVAALGLPSKLKA--SPYEQQNALFVSRRRSKKKNQSFSPVARLFGPAIFEASKLKV 58
             M SL+A+L LP+ LK   S  E+ +++  + R SK+K QS  PVARLFG AIFEASKL V
Sbjct:     1 MCSLMASLLLPANLKPDFSDKERSSSIPSTTRSSKRKKQSMFPVARLFGQAIFEASKLNV 60

Query:    59 LFLGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKK 118
              FLGVDE+KHP  LPRTYT THSDIT+KLTLAIS +INNSQLQGW NRL RDEVVAEW+K
Sbjct:    61 KFLGVDEKKHPPNLPRTYTFTHSDITAKLTLAISHSINNSQLQGWANRLYRDEVVAEWRK 120

Query:   119 VKGKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEAL 178
             VK  MSLHVHCHISG HFLLD+ A LR+FIF KELP+VLKAFVHGD N+LNN+PEL EA 
Sbjct:   121 VKSNMSLHVHCHISGDHFLLDLIAELRYFIFCKELPMVLKAFVHGDENMLNNYPELHEAF 180

Query:   179 VWVYFHSNIPEFNKVECWGPLKEAVAGSSEAGGTRHEIRQETSISNWELPEP-CQETCNC 237
             VWVYFHSNIP+FNKVECWG L EA         T H+  +  +     LPEP C + C+C
Sbjct:   181 VWVYFHSNIPKFNKVECWGRLCEA---------TSHDGCKTPTCEI--LPEPPCFDKCSC 229

Query:   238 CFPPMSLIPWS 248
             CFP +S IPWS
Sbjct:   230 CFPTVSTIPWS 240

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2037154 AT1G44000 "AT1G44000" [Arabidopsis thaliana (taxid:3702)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 95/177 (53%), Positives = 122/177 (68%)

Query:    36 NQSFSPVARLFGP-AIFEASKLKVLFLG-VDEEKHPGKL--PRTYTLTHSDITSKLTLAI 91
             N   S   RL  P A F++SKLKV FLG + E K  G +  PRTY L+H D T+ LTL I
Sbjct:    57 NTLVSEAVRLLVPQANFDSSKLKVEFLGELLENKSNGGIITPRTYILSHCDFTANLTLTI 116

Query:    92 SQTINNSQLQGWYNRLQRDEVVAEWKKVKGKMSLHVHCHISGGHFLLDICARLRFFIFSK 151
             S  IN  QL+GWY   ++D+VVAEWKKV  ++ LH+HC +SG   L D+ A LR+ IFSK
Sbjct:   117 SNVINLDQLEGWY---KKDDVVAEWKKVNDELRLHIHCCVSGMSLLQDVAAELRYHIFSK 173

Query:   152 ELPVVLKAFVHGDGNLLNNHPELQEALVWVYFHSNIPEFNKVECWGPLKEAVAGSSE 208
             ELP+VLKA VHGD  +   +PEL +A VWVYFHS+ P++N++ECWGPLK+A  G  +
Sbjct:   174 ELPLVLKAVVHGDSVMFRENPELMDAYVWVYFHSSTPKYNRIECWGPLKDAAKGKQQ 230


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.133   0.411    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      271       271   0.00098  114 3  11 22  0.49    33
                                                     32  0.40    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  228 KB (2125 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.75u 0.18s 24.93t   Elapsed:  00:00:01
  Total cpu time:  24.75u 0.18s 24.93t   Elapsed:  00:00:01
  Start:  Thu May  9 15:09:28 2013   End:  Thu May  9 15:09:29 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009658 "chloroplast organization" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0018023401 hypothetical protein (269 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	271
pfam12638	149	pfam12638, Staygreen, Staygreen protein	6e-88

>gnl|CDD|221681 pfam12638, Staygreen, Staygreen protein

 Score =  257 bits (660), Expect = 6e-88
 Identities = 92/154 (59%), Positives = 111/154 (72%), Gaps = 6/154 (3%)

Query: 49  AIFEASKLKVLFLGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQ 108
           A F+ SKL V FLG   E  P  +PR YTLTHSD+T+ LTL I  T N  QL    N L 
Sbjct: 1   AKFDPSKLSVEFLGPITETGPI-IPRRYTLTHSDVTANLTLTIGNTYNLDQL----NTLL 55

Query: 109 RDEVVAEWKKVKGKMSLHVHCHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLL 168
           RDEV+AEWKKV G+ SLHVHC++SGG+  LD+ A+ R++IF KELP+VLKA  +GD  L 
Sbjct: 56  RDEVLAEWKKVNGQYSLHVHCYVSGGNLDLDLAAK-RYYIFRKELPLVLKAIRYGDRVLF 114

Query: 169 NNHPELQEALVWVYFHSNIPEFNKVECWGPLKEA 202
             HPEL  A VWVYFHS+ PEFN+VECWGPL++A
Sbjct: 115 KEHPELLNAPVWVYFHSSSPEFNRVECWGPLRDA 148

This family of proteins have been implicated in chlorophyll degradation. Intriguingly members of this family are also found in non-photosynthetic bacteria. Length = 149

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	271
PF12638	151	Staygreen: Staygreen protein; InterPro: IPR024438	100.0

>PF12638 Staygreen: Staygreen protein; InterPro: IPR024438 This domain is found in a family of proteins have been implicated in chlorophyll degradation [, ]

Probab=100.00  E-value=2.6e-75  Score=495.70  Aligned_cols=149  Identities=58%  Similarity=1.016  Sum_probs=144.8

Q ss_pred             CCCCCcceEEEe-ccCCcCCCCCCCcceeeccCCcCCceEEEEccccchhhhhhhccccccceeeeeEeeeCCeeEEEEE
Q 024155           50 IFEASKLKVLFL-GVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQGWYNRLQRDEVVAEWKKVKGKMSLHVH  128 (271)
Q Consensus        50 ~Fnp~KLsV~f~-gvt~~~~P~~ipRrYTLTHSD~T~~LfLtIg~~fn~dqL~gwynrl~RDEVlAEWk~~~g~~~LhVy  128 (271)
                      +|||+||+|+|+ |++ +++|+ +||||||||||+||+|||+||.+||+|||   ||++|||||||||++++|+|+||||
T Consensus         2 ~F~p~KL~V~f~~~~t-~~~P~-~pR~YTLTHsD~T~~L~L~Ig~~~~~d~l---~~~~~RDEVlaEW~~~~~~~~L~v~   76 (151)
T PF12638_consen    2 KFNPSKLSVEFRGGIT-PTHPI-IPRRYTLTHSDFTGELFLTIGNEFNYDQL---YNRLMRDEVLAEWKKVNGQYSLHVY   76 (151)
T ss_pred             CCChHHeEEEecCCCC-cCCCC-CCceEEeecCCccCceEEEeeHHhhHHHh---hccchhceEEEEEEEcCCEEEEEEE
Confidence            799999999999 565 89998 99999999999999999999999999999   7889999999999999999999999


Q ss_pred             EEeeCCccchhHHhhHHHHHHhhhhhhhhhhhhhcCccccccCcccCCCeeEEEEeeCCCCCcceeeeccccccc
Q 024155          129 CHISGGHFLLDICARLRFFIFSKELPVVLKAFVHGDGNLLNNHPELQEALVWVYFHSNIPEFNKVECWGPLKEAV  203 (271)
Q Consensus       129 c~VsG~~f~~~~~A~lRy~IFrKELPLvLkAI~yGDr~LF~~~PeL~~ApI~V~FhS~~p~fnriE~wG~l~da~  203 (271)
                      |||||+|++++++|++||+||+||||||||||+|||+.||++||+|++|||||||||++|+||++||||+|+||.
T Consensus        77 ~~V~g~~~~~~~aa~~Ry~IF~kELPl~L~Ai~yGD~~lf~~~P~L~~a~I~V~F~S~~p~~n~~e~wG~~~dy~  151 (151)
T PF12638_consen   77 CYVSGGHFDKDLAARLRYYIFRKELPLALKAIRYGDRSLFAEHPELDDAPIWVHFHSSYPEFNRIECWGTLRDYA  151 (151)
T ss_pred             EEECCCccChhHHHHHHHHHHHHHHHHHHHHHhhccHHHHHhChhhcCCCEEEEEecCCCCCCcEEEECChHhCC
Confidence            999999999999888999999999999999999999999999999999999999999999999999999999984

Intriguingly members of this family are also found in non-photosynthetic bacteria.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00