Citrus Sinensis ID: 024266

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Protein Sequence
MEHKHGKAYSNILKLLPKSSVVNFQNPLYSPGREKRSDPHHHHHHMNKTKTHIGKGFSGPMMSMSLVPADARTRNLKNNNHQSLANQEPTSPKISCMGQIKHKHKQRQKFDKAKSFSVAKEEKRNTSKVFSPKQAKKHPSMLKRMFTMSKSTAARKSFDQADNHDERRSLPDRAPGLSQMKRFASGRDAFSSFDWTAQQIAPETDRGAYYSYEERGDSDEEQDEDRVIIPFSAPIAVVKGVALQPRKEVNLWKRRPMNPPAPLQLNSTLS
Secondary Structure (PSIPRED)
cccccccccHHHHHHcccccEEccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccEEEEccccEEEcccccccccccHHcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHccccHHHHHHHccccEEEEcccccccccccccccccccccccccccccccccccccccEEEEccHHHHcccccccccccccccccccccEEEHHHEHccccccccccccccccccccccccccccccccHccccHHHHHHHHccccccccccccccccccHHHcccccccccHHHHHHHHccHHHHcccccHEEEccccccccccccHHHccccccccccccEEEEccccEEEcccccccccHHHHHHHccccccccccccccccc
Coil and Loop (DISEMBL)
mehkhgkaysnilkllpkssvvnfqnplyspgrekrsdphhhhhhmnktkthigkgfsgpmmsmslvpadartrnlknnnhqslanqeptspkiscmgqikhkhkqrqkfdkaksfsvakeekrntskvfspkqakkhpsmLKRMFTMSKSTaarksfdqadnhderrslpdrapglsqmkrfasgrdafssfdwtaqqiapetdrgayysyeergdsdeeqdedrviipfsapiavvkgvalqprkevnlwkrrpmnppaplqlnstls
Flexible Loop (DISEMBL)
mehkhgkaysnilkllpkssvvNFQNPLYSPGREKRSDPHHHHHHMNKTKTHIGKGFSGPMMSMSLVPADARTRNLKNnnhqslanqeptspkiSCMGQIKHkhkqrqkfdkaksfsvakeekrntskvfspkqakkhpsmlKRMFTMSKSTAARKsfdqadnhderrslpdrapglsQMKRFASGRDafssfdwtaqqiapetdrgayYSYEERGDSDEEQDEDRVIIPFSapiavvkgvalqprkevnlwkrrpmnppaplqlnstls
Low Complexity Region (SEG)
MEHKHGKAYSNILKLLPKSSVVNFQNPLYSPGREKRSDPhhhhhhMNKTKTHIGKGFSGPMMSMSLVPADARTRNLKNNNHQSLANQEPTSPKISCMGQIKHKHKQRQKFDKAKSFSVAKEEKRNTSKVFSPKQAKKHPSMLKRMFTMSKSTAARKSFDQADNHDERRSLPDRAPGLSQMKRFASGRDAFSSFDWTAQQIAPETDRGAYYSYEERGDSDEEQDEDRVIIPFSAPIAVVKGVALQPRKEVNLWKRRPMNPPAPLQLNSTLS
Disordered region (IsUnstruct)
************************************************************************************************************************************************************************************************FDWT******************************VIIPFSAPIAVVKGVALQPRKEVNLW******************
Disordered Region (DISOPRED)
**************LLPKSSVVNFQNP********************************PMMSMSL********************************************************************************************************************F*SGRDAFSSFDWTAQQIAPETDRGAYY************DEDRVIIPFSAPIAVVKGVALQPRKEVNLWKRRPMNPPAPLQL*****
Disordered Region (DISEMBL)
********YSNILKLLPKSSVVNFQNPLYS*********************HIGKGFSGPMMSMSLVPADARTRNLKNNNHQSLANQEPTSPKISC*******************************************SMLKRMFTMSKST****************SLPDRAPGLSQMKRFASGRDAFSSFDWTAQQIAPETDRGAYYSYE**********EDRVIIPFSAPIAVVKGVALQPRKEVNLWKRRPMNPPAPLQLNSTLS
Disordered Region (DISPRO)
*******AYSNILKLLPKSSVVNFQNPLYS**************************FSGPMMSMSLVPADART***********ANQEPTSPKISCMGQIKHK************************************************************************************DAFSSFDWTAQQIAPETD****Y*************EDRVIIPFSAPIAVVKGVALQPRKEVNLWKRRPMNPPAPLQL*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEHKHGKAYSNILKLLPKSSVVNFQNPLYSPGREKRSDPHHHHHHMNKTKTHIGKGFSGPMMSMSLVPADARTRNLKNNNHQSLANQEPTSPKISCMGQIKHKHKQRQKFDKAKSFSVAKEEKRNTSKVFSPKQAKKHPSMLKRMFTMSKSTAARKSFDQADNHDERRSLPDRAPGLSQMKRFASGRDAFSSFDWTAQQIAPETDRGAYYSYEERGDSDEEQDEDRVIIPFSAPIAVVKGVALQPRKEVNLWKRRPMNPPAPLQLNSTLS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	270	2.2.26 [Sep-21-2011]
Q9SGS5	272	Uncharacterized protein A	yes	no	0.866	0.860	0.381	1e-26

>sp|Q9SGS5|Y1607_ARATH Uncharacterized protein At1g76070 OS=Arabidopsis thaliana GN=At1g76070 PE=1 SV=1

 Score =  120 bits (300), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/270 (38%), Positives = 139/270 (51%), Gaps = 36/270 (13%)

Query: 15  LLPKSSVVNFQNPLYSPGREKRSDPHHHHHHMNKTKTHIGKGFSGPMMSMSLVPADARTR 74
           +LPK+     + P +SPGR+   + HH++   NK        FSGPM+   LVP  AR R
Sbjct: 21  MLPKAMSFGHRVPPFSPGRDLHHNNHHNYTAANKM------FFSGPMVP--LVPNAARVR 72

Query: 75  NLKNNNHQSLANQEPTSPKISCMGQIKHKHKQ--RQKFDKAKSFSVAKEEKRNTSKVFSP 132
                N       EPTSPK+SC+GQIK    +    K +KA S  + K  K +TS + + 
Sbjct: 73  R----NKSDAVWDEPTSPKVSCIGQIKLGKSKCPTGKKNKAPSSLIPKISKTSTSSL-TK 127

Query: 133 KQAKKHPSMLKRMFTMSKSTA---ARKS----FDQADNHDERRSLPDRAPGLSQMKRFAS 185
           +  K   S +K +F+ S ++    +RKS       AD H          P L QMK+FAS
Sbjct: 128 EDEKGRLSKIKSIFSFSPASGRNTSRKSHPTAVSAADEHPVTVVSTAAVPSLGQMKKFAS 187

Query: 186 GRDAFSSFDWTAQQIAPETD-----RGAYYSYEERGDS---DEEQDEDRVIIPFSAPIAV 237
            RDA   FDW  +    E       RG Y   + RG     D+++DED +IIPFSAP+  
Sbjct: 188 SRDALGDFDWAVEMKHEEESPADHHRGYYSDDDTRGAYLRYDDDEDEDDIIIPFSAPLG- 246

Query: 238 VKGVALQPRKEVNLWKRRPMNPPAPLQLNS 267
                L+P+KEVNLWKRR M+PP PL L +
Sbjct: 247 -----LKPKKEVNLWKRRTMDPPKPLHLQT 271


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.313    0.127    0.370 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,706,755
Number of Sequences: 539616
Number of extensions: 4032162
Number of successful extensions: 13689
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 13512
Number of HSP's gapped (non-prelim): 158
length of query: 270
length of database: 191,569,459
effective HSP length: 116
effective length of query: 154
effective length of database: 128,974,003
effective search space: 19861996462
effective search space used: 19861996462
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	270
255539066	275	conserved hypothetical protein [Ricinus	0.925	0.909	0.508	1e-58
224065741	253	predicted protein [Populus trichocarpa]	0.907	0.968	0.509	3e-57
224083175	244	predicted protein [Populus trichocarpa]	0.877	0.971	0.488	2e-48
147855295	245	hypothetical protein VITISV_001638 [Viti	0.885	0.975	0.494	7e-48
356553333	246	PREDICTED: uncharacterized protein At1g7	0.814	0.894	0.457	8e-38
357467101	245	Syringolide-induced protein 14-1-1 [Medi	0.851	0.938	0.432	4e-35
356562433	228	PREDICTED: uncharacterized protein At1g7	0.759	0.899	0.403	2e-34
388498468	280	unknown [Lotus japonicus]	0.888	0.857	0.393	2e-33
388505078	247	unknown [Medicago truncatula]	0.811	0.886	0.391	1e-32
357438573	247	Syringolide-induced protein 14-1-1 [Medi	0.811	0.886	0.391	1e-32

>gi|255539066|ref|XP_002510598.1| conserved hypothetical protein [Ricinus communis] gi|223551299|gb|EEF52785.1| conserved hypothetical protein [Ricinus communis]

 Score =  232 bits (592), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/285 (50%), Positives = 179/285 (62%), Gaps = 35/285 (12%)

Query: 1   MEHKHGKAY---SNILKLLPKS-SVVNFQNPLYSPGREKRSDPHHHHHHMNKTKTHIGKG 56
           ME +H +A    + ILK LPK+ S V+FQNP +SPGR+KR  P +H H  N+ K+H+GKG
Sbjct: 1   MEKQHQQAAKPKNKILKFLPKAASAVSFQNPPFSPGRDKRI-PEYHQHFHNRVKSHVGKG 59

Query: 57  FSGPMMSMSLVPADARTRNLKNNNHQSLANQEPTSPKISCMGQIKHKHKQRQKFDKAKSF 116
           +SGP++S  ++P +AR R  KN    S  N EPTSPKISCMGQIKHK K      K K+ 
Sbjct: 60  YSGPIVS--IIPDEARRRTSKNG---SFENHEPTSPKISCMGQIKHKKKIINSSSKNKAK 114

Query: 117 SVAKEEKRNTSKVFSPKQAKKHPSMLKRMFTMSKSTAARKSFDQADNHDERRS------- 169
           +   E +++TS     ++ KKH   +KRMF    S A +        H  RRS       
Sbjct: 115 NQETEPEKSTSTSTPRREIKKHALTIKRMF----SNAVK-----VPEHGRRRSDASMYDK 165

Query: 170 --LPD---RAPGLSQMKRFASGRDAFSSFDWTAQQIAPETDRGAYYS--YEERGDSDEEQ 222
             L D   RAP LSQ+KRFASGRD F++FDWT+Q +  E+D   YYS   EE   SD + 
Sbjct: 166 PPLTDTSHRAPALSQLKRFASGRDTFANFDWTSQVVPAESDHRNYYSDDEEEERHSDHDY 225

Query: 223 DEDRVIIPFSAPIAVVKGVA-LQPRKEVNLWKRRPMNPPAPLQLN 266
           DED VIIPFSAPI V  GV  LQPRKEVNLW+RR MNPP PLQLN
Sbjct: 226 DED-VIIPFSAPIIVGPGVGNLQPRKEVNLWRRRTMNPPKPLQLN 269

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065741|ref|XP_002301948.1| predicted protein [Populus trichocarpa] gi|222843674|gb|EEE81221.1| predicted protein [Populus trichocarpa]

 Score =  227 bits (579), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 139/273 (50%), Positives = 178/273 (65%), Gaps = 28/273 (10%)

Query: 1   MEHKHGKAYSNILKLLPKS-SVVNFQNPLYSPGREKRSDPHHHHHHMNKTKTHIGKGFSG 59
           ME +     + ILK LPK+ S VNF N  +SPGR++RS+  H H      K ++GKGF+ 
Sbjct: 1   MEKQAAAPPNRILKFLPKAASAVNFHNLAFSPGRDRRSEIIHKH------KANVGKGFN- 53

Query: 60  PMMSMSLVPADARTRNLKNNNHQSLANQEPTSPKISCMGQIKHKHKQRQKFDKA--KSFS 117
           P  SM  +P + R R  KN + ++   +EPTSPKISCMGQIKHK    +K +KA  K  S
Sbjct: 54  PCRSM--IPVEVR-RQPKNESFET--QEEPTSPKISCMGQIKHK----KKMNKATYKRVS 104

Query: 118 VAKEEKRNTSKVFSPKQAKKHPSMLKRMFTMSKSTAARKSFDQADNHDERRSLPDRAPGL 177
           + +E K  +    + +Q  KH S LKR+FT SK+     +FD       + +LPDRAP L
Sbjct: 105 LPQETKPASQ---TQRQVMKHASKLKRLFTGSKAGRKSNAFDGG-----KPTLPDRAPSL 156

Query: 178 SQMKRFASGRDAFSSFDWTAQQIAPETDRGA-YYSYEERGDSDEEQDEDRVIIPFSAPIA 236
           SQMKRFASGRD  +SFDWTA QIAP    G  YYS EERGDS E+Q+++ VIIPFSAP+ 
Sbjct: 157 SQMKRFASGRDTLASFDWTAHQIAPVEPVGRDYYSDEERGDSFEDQEDEEVIIPFSAPMV 216

Query: 237 VVKGVALQPRKEVNLWKRRPMNPPAPLQLNSTL 269
           +  GV L PRKEVNLWKRR M+PP PL+L S++
Sbjct: 217 LGGGVDLLPRKEVNLWKRRTMDPPEPLRLKSSM 249

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083175|ref|XP_002306958.1| predicted protein [Populus trichocarpa] gi|222856407|gb|EEE93954.1| predicted protein [Populus trichocarpa]

 Score =  198 bits (504), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/260 (48%), Positives = 163/260 (62%), Gaps = 23/260 (8%)

Query: 12  ILKLLPKS-SVVNFQNPLYSPGREKRSDPHHHHHHMNKTKTHIGKGFSGPMMSMSLVPAD 70
           ILK LPK  S VNF N    PGR+KRS+  H H      K   GKG + P+ S  L+P +
Sbjct: 2   ILKFLPKVVSAVNFHNLTVGPGRDKRSENAHKH------KAIAGKGVN-PVRS--LIPVE 52

Query: 71  ARTRNLKNNNHQSLANQEPTSPKISCMGQIKHKHKQRQKFDKAKSFSVAKEEKRNTSKVF 130
            R R  KN + ++   ++PTSPK+SC+GQ+KHK K  +    +K      +E +  S+  
Sbjct: 53  VR-RQPKNESFET--QEDPTSPKVSCIGQVKHKKKMYKA--TSKRVPWLPQETKPVSQ-- 105

Query: 131 SPKQAKKHPSMLKRMFTMSKSTAARKSFDQADNHDERRSLPDRAPGLSQMKRFASGRDAF 190
           +P + KKH S L R+FT SK  A RKS        ++ +LPD+ P LSQM RFASGRD  
Sbjct: 106 NPHKIKKHASKLMRLFTGSK--AGRKSIVSGG---DKPTLPDKTPSLSQMTRFASGRDTL 160

Query: 191 SSFDWTAQQIAP-ETDRGAYYSYEERGDSDEEQDEDRVIIPFSAPIAVVKGVALQPRKEV 249
           + FDWTA QIAP E+DR  YYS EER D  EE++ + VIIPFSAPI V  G+ L PRKE+
Sbjct: 161 AGFDWTAHQIAPVESDRRDYYSDEERVDRLEEEEHEEVIIPFSAPIMVGGGIDLLPRKEI 220

Query: 250 NLWKRRPMNPPAPLQLNSTL 269
           NLWK+R +NPP PLQL S +
Sbjct: 221 NLWKKRTINPPNPLQLRSNM 240

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147855295|emb|CAN83887.1| hypothetical protein VITISV_001638 [Vitis vinifera]

 Score =  196 bits (499), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 134/271 (49%), Positives = 171/271 (63%), Gaps = 32/271 (11%)

Query: 3   HKHGKAYSNILKLLPKS-SVVNFQNPL-YSPGRE-KRSDPHHHHHHMNKTKTH-IGKGFS 58
            K  K+ + ILK LPK+ SV+NFQN   +SPGR+ KRS         NK K H  G+GFS
Sbjct: 2   EKPAKSKNMILKFLPKAASVINFQNSTPFSPGRDHKRSS-----DSTNKFKAHGAGRGFS 56

Query: 59  GPMMSMSLVPADARTRNLKNNNHQSLANQEPTSPKISCMGQIKHKHKQRQKFDKAKSFSV 118
           GPM+SM  +P +A  R+   N       QEPTSPK+SCMGQ+K KHK+R    K K  S 
Sbjct: 57  GPMISM--IPVEAHWRSRSGN----FDRQEPTSPKVSCMGQVKDKHKKR--IPKTKRASP 108

Query: 119 AKEEKRNTSKVFSPKQAKKHPSMLKRMFTMSKSTAARKSFDQADNHDERRSLPDRAPGLS 178
            KE K        P++ KK  S L+R+F  S S   RKS     + D++ SLPDRAP L 
Sbjct: 109 PKESK--------PREMKKQHSTLRRIFRSSNS--GRKS---DASSDDKPSLPDRAPSLG 155

Query: 179 QMKRFASGRDAFSSFDWTAQQIAPETDRGAYYSYEERGDSDEEQDEDRVIIPFSAPIAVV 238
           QMKRF+SGR+AFS+FDWTA     ++D  +YYS EE    D E++++  IIPFSAPI V 
Sbjct: 156 QMKRFSSGRNAFSNFDWTAPVAPVDSDHRSYYSDEE--RGDFEEEDEEFIIPFSAPILVG 213

Query: 239 KGVALQPRKEVNLWKRRPMNPPAPLQLNSTL 269
             VAL+PRKE+NLWKRR + PP PL+LN+ +
Sbjct: 214 GAVALEPRKEINLWKRRTLVPPRPLRLNTIV 244

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356553333|ref|XP_003545011.1| PREDICTED: uncharacterized protein At1g76070-like [Glycine max]

 Score =  163 bits (412), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 123/269 (45%), Positives = 151/269 (56%), Gaps = 49/269 (18%)

Query: 12  ILKLLPKSSV----VNFQNPLYSPGREKRSDPHHHHHHMNKTKTHIGKGF-SGPMMSMSL 66
           I K+LPK++     + FQNP +SPGR+            +K K H GKGF SGPM     
Sbjct: 15  IFKILPKAAAAAVSMTFQNPPFSPGRD------------HKFKHHGGKGFFSGPM----- 57

Query: 67  VPADARTRNLKNNNHQSLANQEPTSPKISCMGQIKHKHKQRQKFDKAKSFSVAKEEKRNT 126
           +P +AR    + +    +  QEPTSPKISCMGQIKHK K+ Q    AK+ S+  EEK   
Sbjct: 58  IPVEAR----RKSKDGCVETQEPTSPKISCMGQIKHKKKKNQIKKAAKTMSMPTEEK--- 110

Query: 127 SKVFSPKQAKKHPSMLKRMFTMSKSTAARKSFDQADNHDERRSLPDRAPGLSQMKRFASG 186
                 KQA K   M+       K  AARK    AD   ER      AP L  M+RFASG
Sbjct: 111 ------KQASKFQRMMSFHSGKPKRPAARKQQSDADLESERSP----APPLGHMRRFASG 160

Query: 187 RDAFSSFDWTAQQIAPETDRGAYYSYEERGDSDEEQDEDRVIIPFSAPIAVVKGVA---- 242
           R+ FS+FDW A QIAPE +R  Y  Y++R +SD    ED +IIPFSAP+ V    +    
Sbjct: 161 RETFSNFDWKA-QIAPE-ERDCYSYYDDRLESDA---EDEIIIPFSAPLTVGGAASALNL 215

Query: 243 -LQPRKEVNLWKRRPMNPPAPLQLNSTLS 270
             QPRKE+NLWKRR M PP PLQLN  L+
Sbjct: 216 NAQPRKEINLWKRRTMAPPRPLQLNPVLT 244

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357467101|ref|XP_003603835.1| Syringolide-induced protein 14-1-1 [Medicago truncatula] gi|355492883|gb|AES74086.1| Syringolide-induced protein 14-1-1 [Medicago truncatula]

 Score =  154 bits (389), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 118/273 (43%), Positives = 159/273 (58%), Gaps = 43/273 (15%)

Query: 4   KHGKAYSNILKLLPKSSVVNFQNPLYSPGREKRSDPHHHHHHMNKTKT---HIGKGFSGP 60
           K+ K  + ILK+LPK+  +NFQN  +SPGR+      H     N TK    H  KGFSGP
Sbjct: 3   KNLKLRNKILKILPKTITINFQNHPFSPGRD------HKSRQDNATKWARPHGVKGFSGP 56

Query: 61  MMSMSLVPADARTRNLKNNNHQSLANQEPTSPKISCMGQIKHKHKQRQKFDKAKSFSVAK 120
           + S  ++P +AR    K+ +   +  +EPTSPKISCMGQIKHK KQ +K           
Sbjct: 57  IQS--IIPREARR---KSKDINGIDYEEPTSPKISCMGQIKHKKKQIKKSKDM------- 104

Query: 121 EEKRNTSKVFSPKQAKKHPSMLKRM-FTMSK-STAARKSFDQADNHDERRSLPDRAPGLS 178
                        + KKH +  ++M F + K  +  R+  D     D++ ++ +RA  +S
Sbjct: 105 -------------EVKKHVNTFQKMLFHVGKPKSEGRRKSDACAVQDKKYAIEERATHVS 151

Query: 179 QMKRFASGRDAFSSFDWTAQQIAPETDRGAYYSYEERGDSDEEQDEDRVIIPFSAPI--- 235
           QMKRFASGRD F++FDW A Q+APE +   YYS EER  SD++ DE+   IPFSAP+   
Sbjct: 152 QMKRFASGRDTFANFDWKA-QVAPE-EIDNYYSDEERMQSDDDDDEEEFKIPFSAPLGGG 209

Query: 236 --AVVKGVALQPRKEVNLWKRRPMNPPAPLQLN 266
             A   G+ L+PRKE+NLWKRR M PP PLQL+
Sbjct: 210 VGACSLGLDLKPRKEINLWKRRTMAPPRPLQLD 242

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356562433|ref|XP_003549476.1| PREDICTED: uncharacterized protein At1g76070-like [Glycine max]

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/265 (40%), Positives = 138/265 (52%), Gaps = 60/265 (22%)

Query: 12  ILKLLPKSSV--VNFQNPLYSPGREKRSDPHHHHHHMNKTKTHIGKGFSGPMMSMSLVPA 69
           I K+LPK++   V FQNP +SPGR+            +K K + GKGF     S  ++P 
Sbjct: 16  IFKILPKAAAMSVTFQNPPFSPGRD------------HKCKHYGGKGF----FSGRMIPD 59

Query: 70  DARTRNLKNNNHQSLANQEPTSPKISCMGQIKHKHKQRQKFDKAKSFSVAKEEKRNTSKV 129
           +AR    K  N   +  QEPTSPKISCMGQIKHK         AK+ S++    R+    
Sbjct: 60  EARR---KAKNGHGVETQEPTSPKISCMGQIKHKK------GGAKNMSMSMPTPRDP--- 107

Query: 130 FSPKQAKKHPSMLKRMFTMSKSTAARKSFDQADNHDERRSLPDRAPGLSQMKRFASGRDA 189
               + KKH S  +RM       A +     AD   ER      AP +  M+RFASGR+ 
Sbjct: 108 ----EVKKHASKFQRMLLFH---AGKPKQSDADVESERAP----APPMGHMRRFASGRET 156

Query: 190 FSSFDWTAQQIAPETDRGAYYSYEERGDSDEEQDEDRVIIPFSAPIAVVKGVAL----QP 245
           FS+FDW AQ IAP                D ++ +D +IIPFSAP+ +    AL    QP
Sbjct: 157 FSNFDWKAQ-IAPH--------------DDVDRLDDEIIIPFSAPLTLGGATALNLNVQP 201

Query: 246 RKEVNLWKRRPMNPPAPLQLNSTLS 270
           RKE+NLWKRR M PP PL+LN  L+
Sbjct: 202 RKEINLWKRRTMAPPRPLKLNPLLT 226

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388498468|gb|AFK37300.1| unknown [Lotus japonicus]

 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/305 (39%), Positives = 162/305 (53%), Gaps = 65/305 (21%)

Query: 1   MEHKHGKAYSNILKLLPKSSVVNFQNPLYSPGRE---KRSDPHH--------HHHHMNKT 49
           ME +H +  S ILK +   S+  F N  +SPGR+    R+D ++        HHH  NK 
Sbjct: 1   MEKQHKRNGSKILKAVIAVSMT-FHNTPFSPGRDHHKSRTDQNNATTKWVKPHHHGGNK- 58

Query: 50  KTHIGKGFSGPMMSMSLVPADARTRNLKNNNHQSLANQEPTSPKISCMGQIKHKHKQRQK 109
                 GFSGPM+  +         NLK+   ++  N+E TSPKISCMGQIKHK  Q +K
Sbjct: 59  ------GFSGPMIPRT---------NLKDGGFENY-NRESTSPKISCMGQIKHKKNQIKK 102

Query: 110 FDKAKSFSVAKEEKR--------------NTSKVFSPKQAKKHPSMLKRMFTMSKS--TA 153
               KS S+  E ++              N++ V   K+        + +F  +K   +A
Sbjct: 103 SKSKKSVSLQNETRKFASTTNKTTTTSTSNSTDVIEVKKKNVASKFQRMLFHAAKQPKSA 162

Query: 154 ARKSFDQADNHDERRSLPDRAPGLSQMKRFASGRDAFSSFDWTAQQIAPETDRGAYYSYE 213
            RKS        +  S    AP +SQMKRF+SGRDAFSSFDW A+  A E     YYS E
Sbjct: 163 GRKS--------DASSAEREAPHMSQMKRFSSGRDAFSSFDWKAEMAAEEIHIDDYYSDE 214

Query: 214 ER-GDSDEEQDEDRVIIPFSAPI---------AVVKG--VALQPRKEVNLWKRRPMNPPA 261
           +R  +SD +++E+R+IIPFSAP+          V  G  + L+PRKE+NLWKRR M PP 
Sbjct: 215 DRVVESDGDEEEERIIIPFSAPMLIGGGAGGGCVAHGDVLNLKPRKEINLWKRRTMAPPR 274

Query: 262 PLQLN 266
           PLQL+
Sbjct: 275 PLQLD 279

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388505078|gb|AFK40605.1| unknown [Medicago truncatula]

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/263 (39%), Positives = 139/263 (52%), Gaps = 44/263 (16%)

Query: 18  KSSVVNFQNPLYSPGREKRSDPHHHHHHMNKTKTH-IGKGFSGPMMSMSLVPADARTRNL 76
           K+  + FQN  +SPGR+ +    + +      KTH +GKGFSGPM++M  +P +AR +  
Sbjct: 15  KAITITFQNAPFSPGRDHKFRSENSNTKWG-AKTHAVGKGFSGPMVTM--IPYEARRKPK 71

Query: 77  KNNNHQSLANQEPTSPKISCMGQIKHKHKQRQKFDKAKSFS--VAKEEKRNTSKVFSPKQ 134
               +++   QEPTSPKISCMGQIKH  K+         F+  V  E KR          
Sbjct: 72  DGGGNET---QEPTSPKISCMGQIKHHKKKNIPKPNKDLFTPKVDTEVKR---------- 118

Query: 135 AKKHPSMLKRMFTM-SKSTAARKSFDQADNHDERRSLPDRAPGLSQMKRFASGRDAFSSF 193
                S  +R+F+  SK+  A +  D +   DE     ++AP +  M+RFASGR+AFS F
Sbjct: 119 -----SKFQRIFSQRSKAKFAERKSDGSGFVDEGN---NKAPPMGDMRRFASGREAFSKF 170

Query: 194 DWTAQQIAPETDRGAYYSYEERGDSDEEQDEDRVIIPFSAPIAVVKG-------VALQPR 246
           DW A     E D+   ++       D E DE  ++IPFSAPI  V G          +PR
Sbjct: 171 DWKAVIEPEEIDQRECFT-------DGEDDE--ILIPFSAPILGVGGNTTGTSDFKFKPR 221

Query: 247 KEVNLWKRRPMNPPAPLQLNSTL 269
            E+NLWKRR M PP PLQLN  L
Sbjct: 222 NEINLWKRRTMAPPRPLQLNPVL 244

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357438573|ref|XP_003589562.1| Syringolide-induced protein 14-1-1 [Medicago truncatula] gi|355478610|gb|AES59813.1| Syringolide-induced protein 14-1-1 [Medicago truncatula]

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/263 (39%), Positives = 139/263 (52%), Gaps = 44/263 (16%)

Query: 18  KSSVVNFQNPLYSPGREKRSDPHHHHHHMNKTKTH-IGKGFSGPMMSMSLVPADARTRNL 76
           K+  + FQN  +SPGR+ +    + +      KTH +GKGFSGPM++M  +P +AR +  
Sbjct: 15  KAITITFQNAPFSPGRDHKFRSENSNTKWG-AKTHAVGKGFSGPMVTM--IPYEARRKPK 71

Query: 77  KNNNHQSLANQEPTSPKISCMGQIKHKHKQRQKFDKAKSFS--VAKEEKRNTSKVFSPKQ 134
               +++   QEPTSPKISCMGQIKH  K+         F+  V  E KR          
Sbjct: 72  DGGGNET---QEPTSPKISCMGQIKHHKKKNIPKPNKDLFTPKVDTEVKR---------- 118

Query: 135 AKKHPSMLKRMFTM-SKSTAARKSFDQADNHDERRSLPDRAPGLSQMKRFASGRDAFSSF 193
                S  +R+F+  SK+  A +  D +   DE     ++AP +  M+RFASGR+AFS F
Sbjct: 119 -----SKFQRIFSQRSKAKFAERKSDGSGFVDEGN---NKAPPMGDMRRFASGREAFSKF 170

Query: 194 DWTAQQIAPETDRGAYYSYEERGDSDEEQDEDRVIIPFSAPIAVVKG-------VALQPR 246
           DW A     E D+   ++       D E DE  ++IPFSAPI  V G          +PR
Sbjct: 171 DWKAVIEPEEIDQRECFT-------DGEDDE--ILIPFSAPILGVGGNTTGTSDFKFKPR 221

Query: 247 KEVNLWKRRPMNPPAPLQLNSTL 269
            E+NLWKRR M PP PLQLN  L
Sbjct: 222 NEINLWKRRTMAPPRPLQLNPVL 244

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	270
TAIR|locus:2199762	272	AT1G76070 "AT1G76070" [Arabido	0.896	0.889	0.381	7.4e-34
TAIR|locus:2012948	240	AT1G20310 "AT1G20310" [Arabido	0.514	0.579	0.365	1.5e-12

TAIR|locus:2199762 AT1G76070 "AT1G76070" [Arabidopsis thaliana (taxid:3702)]

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 106/278 (38%), Positives = 144/278 (51%)

Query:     7 KAYSNILKLLPKSSVVNFQNPLYSPGREKRSDPXXXXXXMNKTKTHIGKGFSGPMMSMSL 66
             K  + +LK+LPK+     + P +SPGR+   +        NK        FSGPM+   L
Sbjct:    13 KNKNKLLKMLPKAMSFGHRVPPFSPGRDLHHNNHHNYTAANKMF------FSGPMVP--L 64

Query:    67 VPADARTRNLKNNNHQSLANQEPTSPKISCMGQIK-HKHK-QRQKFDKAKSFSVAKEEKR 124
             VP  AR R     N       EPTSPK+SC+GQIK  K K    K +KA S  + K  K 
Sbjct:    65 VPNAARVRR----NKSDAVWDEPTSPKVSCIGQIKLGKSKCPTGKKNKAPSSLIPKISKT 120

Query:   125 NTSKVFSPKQAKKHPSMLKRMFTMSKSTA---ARKSF----DQADNHDERRSLPDRAPGL 177
             +TS + + +  K   S +K +F+ S ++    +RKS       AD H          P L
Sbjct:   121 STSSL-TKEDEKGRLSKIKSIFSFSPASGRNTSRKSHPTAVSAADEHPVTVVSTAAVPSL 179

Query:   178 SQMKRFASGRDAFSSFDWTAQ----QIAPETDRGAYYSYEE-RGDS---DEEQDEDRVII 229
              QMK+FAS RDA   FDW  +    + +P      YYS ++ RG     D+++DED +II
Sbjct:   180 GQMKKFASSRDALGDFDWAVEMKHEEESPADHHRGYYSDDDTRGAYLRYDDDEDEDDIII 239

Query:   230 PFSAPIAVVKGVALQPRKEVNLWKRRPMNPPAPLQLNS 267
             PFSAP+       L+P+KEVNLWKRR M+PP PL L +
Sbjct:   240 PFSAPLG------LKPKKEVNLWKRRTMDPPKPLHLQT 271

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2012948 AT1G20310 "AT1G20310" [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 57/156 (36%), Positives = 79/156 (50%)

Query:    59 GPMMSMSLVPADARTRNLKNNNHQSLANQEPTSPKISCMGQIK-HKHKQRQKFDKA-KSF 116
             G   S  LVP  AR R  +N  ++++   EPTSPK+SC+GQ+K  + K  +K +KA K+ 
Sbjct:    48 GIFFSSPLVPTAARVR--RNTKYEAVF-AEPTSPKVSCIGQVKLARPKCPEKKNKAPKNL 104

Query:   117 SVAKEEKRNTSKVFSPKQAKKHPSMLKRMFTMSKSTAARKSFDQADNHDERRSLP----D 172
               A     + S     ++     S LKR+F+M +S  +RKS   A      R  P    D
Sbjct:   105 KTAS----SLSSCVIKEEDNGSFSKLKRIFSM-RSYPSRKSNSTAFAAAAAREHPIAEVD 159

Query:   173 R---APGLSQMKRFASGRDAFSSFDWTAQQIAPETD 205
                 AP L  MK+FAS R+A   FDWT Q    + D
Sbjct:   160 AVTAAPSLGAMKKFASSREALGGFDWTVQMKREKED 195


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.126   0.363    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      270       264   0.00092  114 3  11 23  0.39    34
                                                     32  0.50    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  191 KB (2109 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  26.89u 0.15s 27.04t   Elapsed:  00:00:02
  Total cpu time:  26.89u 0.15s 27.04t   Elapsed:  00:00:02
  Start:  Thu May  9 21:09:06 2013   End:  Thu May  9 21:09:08 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SGS5	Y1607_ARATH	No assigned EC number	0.3814	0.8666	0.8602	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	270
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 3e-05
 Identities = 25/229 (10%), Positives = 58/229 (25%), Gaps = 93/229 (40%)

Query: 40  HHHHHHMNKTKTHIGKGFSGPMMSMSLVPADARTRNLKNNNHQSLANQEPTSPKISCMGQ 99
           HHHHHHM+         F                                        G+
Sbjct: 1   HHHHHHMD---------FE--------------------------------------TGE 13

Query: 100 IKHKHKQ-----RQKFDKAKSFSVAKEEKRNTSKVFSPKQAK---KHPSMLKRMFTMSKS 151
            ++++K         F         ++  ++   + S ++          +         
Sbjct: 14  HQYQYKDILSVFEDAFVDNFDCKDVQDMPKS---ILSKEEIDHIIMSKDAVSG------- 63

Query: 152 TAARKSFDQADNHDERRSLPDRAPGLSQMKRFASGRDAFSSFDWTAQQIA-----PETDR 206
               + F          +L  +      +++F        ++ +    I      P    
Sbjct: 64  --TLRLFW---------TLLSK--QEEMVQKFVEEVLR-INYKFLMSPIKTEQRQPSMMT 109

Query: 207 GAYYSYEERGDSDEEQDEDRVIIPFSA----PIAVVKGVALQPRKEVNL 251
             Y    +R  +D     ++V   ++     P   ++   L+ R   N+
Sbjct: 110 RMYIEQRDRLYND-----NQVFAKYNVSRLQPYLKLRQALLELRPAKNV 153

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00