Citrus Sinensis ID: 024412

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
Protein Sequence
MVEPSPPSPSLQIPNHMVPPPLDPQPQPSPSPPQPQQQRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICTAQYEEEDLKLRYCYKDEALSFIPTISLPSNALSFALKRQFSPSDKLRLELSLFPFFPLHI
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccEEEEEEHHHHccccccEEEEEEEcccccccccEEEEEEEcEEEEEEccccccEEEEEccccccEEEEEEccccccccEEEEEEEccccccEEEEEccccccccccEEEEEcccEEEcHHHHHHHHccEEEEEcEEcccccccEEEEEEcccccEEEEEEEcccEEEEEEccccccccccccccccccccccEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccccccEEccccccEEEEEEEccccHEEEEEEEEHHHccccEEEEEEcccccccccccEEEEEEEEEEEEEEHHHccEEEEEcccccccEEEEEcHcHHHcccEEEEEEEccccccEEEEcccccccccccEEEEccccEEEEEEEEcccccEEEEEEEEEEcccccEEEEEEEcccccEEEEEEccccEEEEEcccccccHcHHHHHHcccccccEEEEEEccccccccc
Coil and Loop (DISEMBL)
mvepsppspslqipnhmvpppldpqpqpspsppqpqqqrtsslfsfpsrpalrvtsefdsdssiFLHKISCKLFDSLAKLKVSfqndnkgqifepqlaFTSKHLSLHYdleeqnafvkssfdvgpklhfrAAHDvkaqqgevgvvanlgdpgyalelsspvpyvgypkatfkfplgevslvereEEEVKKTLSISGIAKGQILNGICTAQYEEEdlklrycykdealsfiptislpsnALSFALkrqfspsdklrlelslfpffplhi
Flexible Loop (DISEMBL)
mvepsppspslqipnHMVPPPLDPQPQPSPSPPQPQQQRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEVSLVEREEEEVKKtlsisgiakgqilNGICTAQYEEEDLKLRYCYKDEALSFIPTISLPSNALSFALKRQFspsdklrlelslfpffplhi
Low Complexity Region (SEG)
MVEPSPPSPSLQIPNHMVpppldpqpqpspsppqpqqqRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGevslvereeeevKKTLSISGIAKGQILNGICTAQYEEEDLKLRYCYKDEALSFIPTISLPSNALSFALKRQFSPSDKLRLELSLFPFFPLHI
Disordered region (IsUnstruct)
*************************************************************SSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEV***************ISGIAKGQILNGICTAQYEEEDLKLRYCYKDEALSFIPTISLPSNALSFALKRQFSPSDKLRLELSLFPFFP***
Disordered Region (DISOPRED)
*********************************************FPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLK*************PQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEVS***********TLSISGIAKGQILNGICTAQYEEEDLKLRYCYKDEALSFIPTISLPSNALSFALKRQFSPSDKLRLELSLFPFFPLHI
Disordered Region (DISEMBL)
**********LQIPNHMVPPPL********************LFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEVSLVE**********SISGIAKGQILNGICTAQYEEEDLKLRYCYKDEALSFIPTISLPSNALSFALKRQFSPSDKLRLELSLFPFFPLHI
Disordered Region (DISPRO)
**************************************RTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICTAQYEEEDLKLRYCYKDEALSFIPTISLPSNALSFALKRQFSPSDKLRLELSLFPFFPLHI
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVEPSPPSPSLQIPNHMVPPPLDPQPQPSPSPPQPQQQRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICTAQYEEEDLKLRYCYKDEALSFIPTISLPSNALSFALKRQFSPSDKLRLELSLFPFFPLHI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	268	2.2.26 [Sep-21-2011]
Q4LDF9	329	Outer envelope pore prote	N/A	no	0.873	0.711	0.620	1e-83
O80565	343	Outer envelope pore prote	yes	no	0.944	0.737	0.596	4e-78

>sp|Q4LDF9|OEP37_PEA Outer envelope pore protein 37, chloroplastic OS=Pisum sativum GN=OEP37 PE=1 SV=1

 Score =  309 bits (792), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 152/245 (62%), Positives = 192/245 (78%), Gaps = 11/245 (4%)

Query: 14  PNHMVPPPLDPQPQPSPSPPQPQQQRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKL 73
           PN+   P +DPQP PS +P       +  +FSFP RPALR+T+EFDS+S++F HKISCK 
Sbjct: 8   PNY--SPEVDPQPLPSTNPIH-----SRPIFSFPKRPALRITTEFDSESTVFFHKISCKF 60

Query: 74  FDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAH 133
            DSLAKLK +F N++KG+I EPQ++F SK+LSLHYDLE+ +A VKSS DVGPKL     H
Sbjct: 61  LDSLAKLKFAFHNNSKGEIAEPQISFVSKYLSLHYDLEDHSALVKSSVDVGPKLKLIGTH 120

Query: 134 DVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEVSLVE----REEEEVK 189
           DVKAQQGEV +VANL DPGYAL+LS+P+P +  PKATFKFP GE+SL E     E+E+VK
Sbjct: 121 DVKAQQGEVTMVANLDDPGYALQLSTPLPSIALPKATFKFPQGEISLQEINDHDEDEQVK 180

Query: 190 KTLSISGIAKGQILNGICTAQYEEEDLKLRYCYKDEALSFIPTISLPSNALSFALKRQFS 249
            +LS+SG  KGQ+L G+CTAQY++++ KLRY YKD+ +SF+P +SLPSNALSFA KR+F 
Sbjct: 181 NSLSVSGTLKGQLLKGLCTAQYKDQEFKLRYRYKDDEMSFLPILSLPSNALSFAFKRRFG 240

Query: 250 PSDKL 254
           PSDKL
Sbjct: 241 PSDKL 245

Voltage-dependent peptide-sensitive high conductance rectifying cation channel with a strong affinity for TIC32 that is imported into the chloroplast. Conductance is pH-dependent decreasing with decreasing pH values.
Pisum sativum (taxid: 3888)

>sp|O80565|OEP37_ARATH Outer envelope pore protein 37, chloroplastic OS=Arabidopsis thaliana GN=OEP37 PE=1 SV=2

 Score =  291 bits (744), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 155/260 (59%), Positives = 199/260 (76%), Gaps = 7/260 (2%)

Query: 1   MVEPSPPSPSLQIPNHMVPPPLDPQPQPSPSPPQPQQQRTSSLFSF---PSRPALRVTSE 57
           M +PS  +P+L  P     P    Q Q   S   P  +   S  SF    +RP LRVTSE
Sbjct: 1   MADPSSQNPNLATPPPPSSPSPTHQIQSGTSELSPPSRPPCSTLSFLKTANRPKLRVTSE 60

Query: 58  FDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFV 117
           FDSDS +FL+K+SCKLFD+LAKLK+SFQN+++ +I +PQ++FTSKH+S+ YD+EE+N F+
Sbjct: 61  FDSDSLLFLNKVSCKLFDNLAKLKLSFQNNSQREISQPQVSFTSKHVSVLYDVEEKNTFI 120

Query: 118 KSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGE 177
           KS+ DV P+L  RA H+VKAQQGEV + ANL +PGY+LELSSPVP +GYP+AT KFPLGE
Sbjct: 121 KSTLDVHPRLQLRALHNVKAQQGEVAMEANLTEPGYSLELSSPVP-IGYPRATLKFPLGE 179

Query: 178 VSL---VEREEEEVKKTLSISGIAKGQILNGICTAQYEEEDLKLRYCYKDEALSFIPTIS 234
           +SL    E EEE+ K+TLS++GI K Q++NG+CTA Y +E+L+LRY YKD+ALSFIP+IS
Sbjct: 180 ISLQEKDEEEEEKQKRTLSVNGILKRQVMNGVCTALYTDEELRLRYAYKDDALSFIPSIS 239

Query: 235 LPSNALSFALKRQFSPSDKL 254
           LPSNA SFA KR+FSPSDKL
Sbjct: 240 LPSNAASFAFKRRFSPSDKL 259

Voltage-dependent peptide-sensitive high conductance rectifying cation channel with a strong affinity for TIC32 that is imported into the chloroplast. Conductance is pH-dependent decreasing with decreasing pH values.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	268
224140693	270	predicted protein [Populus trichocarpa]	0.850	0.844	0.690	5e-87
224095364	318	predicted protein [Populus trichocarpa]	0.768	0.647	0.747	2e-86
118485779	334	unknown [Populus trichocarpa]	0.768	0.616	0.747	2e-86
449444675	333	PREDICTED: outer envelope pore protein 3	0.791	0.636	0.712	7e-83
449489770	369	PREDICTED: outer envelope pore protein 3	0.791	0.574	0.712	2e-82
122220797	329	RecName: Full=Outer envelope pore protei	0.873	0.711	0.620	7e-82
359478237	328	PREDICTED: uncharacterized protein LOC10	0.835	0.682	0.676	8e-82
296084367	325	unnamed protein product [Vitis vinifera]	0.835	0.689	0.676	1e-81
255645606	319	unknown [Glycine max]	0.839	0.705	0.634	7e-79
356562587	319	PREDICTED: uncharacterized protein LOC10	0.794	0.667	0.658	9e-79

>gi|224140693|ref|XP_002323713.1| predicted protein [Populus trichocarpa] gi|222866715|gb|EEF03846.1| predicted protein [Populus trichocarpa]

 Score =  326 bits (836), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 165/239 (69%), Positives = 193/239 (80%), Gaps = 11/239 (4%)

Query: 17  MVPP-PLDPQPQPSPSPPQPQQQRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKLFD 75
           MVPP P    PQ   SP         SL S   RP LRVTSEFDSD+S+F HK+SCKL D
Sbjct: 1   MVPPIPHTDAPQSPASPI--------SLLS--KRPKLRVTSEFDSDTSLFFHKVSCKLLD 50

Query: 76  SLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDV 135
           S AKLK+SFQN+NKG+  +PQ A TSK LS+HYDLEEQNA VK+SFD+GPK HF+AAHDV
Sbjct: 51  SFAKLKLSFQNNNKGEPSQPQFALTSKLLSIHYDLEEQNALVKTSFDLGPKFHFKAAHDV 110

Query: 136 KAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEVSLVEREEEEVKKTLSIS 195
           KAQQGEV +VA+LGDPGYALE+SSPVP VG P+AT KFP GEVSL E+EEEE ++TLS+S
Sbjct: 111 KAQQGEVAMVADLGDPGYALEISSPVPTVGAPRATLKFPHGEVSLGEKEEEEARRTLSVS 170

Query: 196 GIAKGQILNGICTAQYEEEDLKLRYCYKDEALSFIPTISLPSNALSFALKRQFSPSDKL 254
           GI K Q+ NGI TAQ+ +EDLKLRYCYKDE +SFIP+ISLPS+ALSFA KR+F+PS+KL
Sbjct: 171 GIVKSQLTNGIFTAQFNDEDLKLRYCYKDETVSFIPSISLPSSALSFAFKRRFTPSNKL 229

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224095364|ref|XP_002310382.1| predicted protein [Populus trichocarpa] gi|222853285|gb|EEE90832.1| predicted protein [Populus trichocarpa]

 Score =  325 bits (832), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 154/206 (74%), Positives = 184/206 (89%)

Query: 49  RPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHY 108
           RP LRVTSEFDSDSS+F HK+SCKL DS AK K+SFQN+NKG++ +PQ AFTSK LS+HY
Sbjct: 29  RPKLRVTSEFDSDSSLFFHKVSCKLLDSFAKFKLSFQNNNKGELSQPQFAFTSKLLSIHY 88

Query: 109 DLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPK 168
           DLEE NA VK SFD+GP LHF+AAHDVKAQQGEV +VA+LGDPGYALE+SSPVP VG P+
Sbjct: 89  DLEEHNALVKGSFDLGPNLHFKAAHDVKAQQGEVAMVADLGDPGYALEISSPVPTVGVPR 148

Query: 169 ATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICTAQYEEEDLKLRYCYKDEALS 228
           AT KFPLGEVSL E+EEEE+++TLS+SG+ K Q++NG+CTAQ+ +EDLKL+YCYKDEALS
Sbjct: 149 ATLKFPLGEVSLEEKEEEELRRTLSVSGVVKSQLMNGLCTAQFSDEDLKLKYCYKDEALS 208

Query: 229 FIPTISLPSNALSFALKRQFSPSDKL 254
            IP+ISLPSNALSFA KR+F+PS+KL
Sbjct: 209 IIPSISLPSNALSFAFKRRFTPSNKL 234

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118485779|gb|ABK94738.1| unknown [Populus trichocarpa]

 Score =  325 bits (832), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 154/206 (74%), Positives = 184/206 (89%)

Query: 49  RPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHY 108
           RP LRVTSEFDSDSS+F HK+SCKL DS AK K+SFQN+NKG++ +PQ AFTSK LS+HY
Sbjct: 45  RPKLRVTSEFDSDSSLFFHKVSCKLLDSFAKFKLSFQNNNKGELSQPQFAFTSKLLSIHY 104

Query: 109 DLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPK 168
           DLEE NA VK SFD+GP LHF+AAHDVKAQQGEV +VA+LGDPGYALE+SSPVP VG P+
Sbjct: 105 DLEEHNALVKGSFDLGPNLHFKAAHDVKAQQGEVAMVADLGDPGYALEISSPVPTVGVPR 164

Query: 169 ATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICTAQYEEEDLKLRYCYKDEALS 228
           AT KFPLGEVSL E+EEEE+++TLS+SG+ K Q++NG+CTAQ+ +EDLKL+YCYKDEALS
Sbjct: 165 ATLKFPLGEVSLEEKEEEELRRTLSVSGVVKSQLMNGLCTAQFSDEDLKLKYCYKDEALS 224

Query: 229 FIPTISLPSNALSFALKRQFSPSDKL 254
            IP+ISLPSNALSFA KR+F+PS+KL
Sbjct: 225 IIPSISLPSNALSFAFKRRFTPSNKL 250

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444675|ref|XP_004140099.1| PREDICTED: outer envelope pore protein 37, chloroplastic-like [Cucumis sativus]

 Score =  313 bits (801), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 151/212 (71%), Positives = 180/212 (84%)

Query: 43  LFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSK 102
           LF F  RPA+RVTSEFDS+SSIF HK+SCKL D+LAK+K SFQNDNKGQI + Q  F SK
Sbjct: 38  LFPFSKRPAIRVTSEFDSESSIFFHKVSCKLLDNLAKVKFSFQNDNKGQITDSQFQFRSK 97

Query: 103 HLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVP 162
           +LS+HYD +E NA ++SS DVGP+LHFRAAHDVK QQGE+GVVA + DPGY+LELSSPVP
Sbjct: 98  YLSIHYDPDEHNALLRSSIDVGPRLHFRAAHDVKGQQGELGVVAKIADPGYSLELSSPVP 157

Query: 163 YVGYPKATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICTAQYEEEDLKLRYCY 222
            +G P+ATFKFP+GE+SL EREEEEV + +SI+G+ KG+ LNG C A Y++EDL+LRY Y
Sbjct: 158 AIGAPRATFKFPMGEISLEEREEEEVNRAMSINGVLKGKFLNGNCAAHYKDEDLELRYSY 217

Query: 223 KDEALSFIPTISLPSNALSFALKRQFSPSDKL 254
           KDEALSFIP +SLPSNALSFA KR+F PSDKL
Sbjct: 218 KDEALSFIPKVSLPSNALSFAFKRRFGPSDKL 249

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449489770|ref|XP_004158410.1| PREDICTED: outer envelope pore protein 37, chloroplastic-like, partial [Cucumis sativus]

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 151/212 (71%), Positives = 180/212 (84%)

Query: 43  LFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSK 102
           LF F  RPA+RVTSEFDS+SSIF HK+SCKL D+LAK+K SFQNDNKGQI + Q  F SK
Sbjct: 74  LFPFSKRPAIRVTSEFDSESSIFFHKVSCKLLDNLAKVKFSFQNDNKGQITDSQFQFRSK 133

Query: 103 HLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVP 162
           +LS+HYD +E NA ++SS DVGP+LHFRAAHDVK QQGE+GVVA + DPGY+LELSSPVP
Sbjct: 134 YLSIHYDPDEHNALLRSSIDVGPRLHFRAAHDVKGQQGELGVVAKIADPGYSLELSSPVP 193

Query: 163 YVGYPKATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICTAQYEEEDLKLRYCY 222
            +G P+ATFKFP+GE+SL EREEEEV + +SI+G+ KG+ LNG C A Y++EDL+LRY Y
Sbjct: 194 AIGAPRATFKFPMGEISLEEREEEEVNRAMSINGVLKGKFLNGNCAAHYKDEDLELRYSY 253

Query: 223 KDEALSFIPTISLPSNALSFALKRQFSPSDKL 254
           KDEALSFIP +SLPSNALSFA KR+F PSDKL
Sbjct: 254 KDEALSFIPKVSLPSNALSFAFKRRFGPSDKL 285

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|122220797|sp|Q4LDF9.1|OEP37_PEA RecName: Full=Outer envelope pore protein 37, chloroplastic; AltName: Full=Chloroplastic outer envelope pore protein of 37 kDa; Short=PsOEP37; Flags: Precursor gi|5531418|emb|CAB50915.1| outer envelope protein [Pisum sativum]

 Score =  309 bits (792), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 152/245 (62%), Positives = 192/245 (78%), Gaps = 11/245 (4%)

Query: 14  PNHMVPPPLDPQPQPSPSPPQPQQQRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKL 73
           PN+   P +DPQP PS +P       +  +FSFP RPALR+T+EFDS+S++F HKISCK 
Sbjct: 8   PNY--SPEVDPQPLPSTNPIH-----SRPIFSFPKRPALRITTEFDSESTVFFHKISCKF 60

Query: 74  FDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAH 133
            DSLAKLK +F N++KG+I EPQ++F SK+LSLHYDLE+ +A VKSS DVGPKL     H
Sbjct: 61  LDSLAKLKFAFHNNSKGEIAEPQISFVSKYLSLHYDLEDHSALVKSSVDVGPKLKLIGTH 120

Query: 134 DVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGEVSLVE----REEEEVK 189
           DVKAQQGEV +VANL DPGYAL+LS+P+P +  PKATFKFP GE+SL E     E+E+VK
Sbjct: 121 DVKAQQGEVTMVANLDDPGYALQLSTPLPSIALPKATFKFPQGEISLQEINDHDEDEQVK 180

Query: 190 KTLSISGIAKGQILNGICTAQYEEEDLKLRYCYKDEALSFIPTISLPSNALSFALKRQFS 249
            +LS+SG  KGQ+L G+CTAQY++++ KLRY YKD+ +SF+P +SLPSNALSFA KR+F 
Sbjct: 181 NSLSVSGTLKGQLLKGLCTAQYKDQEFKLRYRYKDDEMSFLPILSLPSNALSFAFKRRFG 240

Query: 250 PSDKL 254
           PSDKL
Sbjct: 241 PSDKL 245

Source: Pisum sativum

Species: Pisum sativum

Genus: Pisum

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478237|ref|XP_002275927.2| PREDICTED: uncharacterized protein LOC100264576 [Vitis vinifera]

 Score =  309 bits (791), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 157/232 (67%), Positives = 188/232 (81%), Gaps = 8/232 (3%)

Query: 29  SPSPPQPQQQRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDN 88
           SPSP  P        + +P RP++R+TSEFDSDSSIF HKISCKLFDSLAKLK+SFQN+N
Sbjct: 27  SPSPQGP--------WLWPRRPSIRLTSEFDSDSSIFFHKISCKLFDSLAKLKLSFQNNN 78

Query: 89  KGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANL 148
            G+IF+PQL F SKHLSLHYDL+  NAF+K  FDVG +LHF AAHDVKAQQGEV +VA+L
Sbjct: 79  DGEIFDPQLGFISKHLSLHYDLQNHNAFIKGCFDVGSRLHFNAAHDVKAQQGEVAMVADL 138

Query: 149 GDPGYALELSSPVPYVGYPKATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICT 208
             PGY  ELSS VP +G+PKAT KFP GEVSL E+EEEEVKK LSI+GI + QILNG+ +
Sbjct: 139 AGPGYKFELSSAVPAIGFPKATLKFPAGEVSLEEKEEEEVKKMLSINGILQHQILNGVFS 198

Query: 209 AQYEEEDLKLRYCYKDEALSFIPTISLPSNALSFALKRQFSPSDKLRLELSL 260
           AQ+ ++DLKLRY YKDE ++FIP+IS+PSNA+SFA KR+FSPSDKL    +L
Sbjct: 199 AQFRDDDLKLRYLYKDEQVAFIPSISMPSNAISFAFKRRFSPSDKLSYWYNL 250

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296084367|emb|CBI24755.3| unnamed protein product [Vitis vinifera]

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 157/232 (67%), Positives = 188/232 (81%), Gaps = 8/232 (3%)

Query: 29  SPSPPQPQQQRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDN 88
           SPSP  P        + +P RP++R+TSEFDSDSSIF HKISCKLFDSLAKLK+SFQN+N
Sbjct: 24  SPSPQGP--------WLWPRRPSIRLTSEFDSDSSIFFHKISCKLFDSLAKLKLSFQNNN 75

Query: 89  KGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANL 148
            G+IF+PQL F SKHLSLHYDL+  NAF+K  FDVG +LHF AAHDVKAQQGEV +VA+L
Sbjct: 76  DGEIFDPQLGFISKHLSLHYDLQNHNAFIKGCFDVGSRLHFNAAHDVKAQQGEVAMVADL 135

Query: 149 GDPGYALELSSPVPYVGYPKATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICT 208
             PGY  ELSS VP +G+PKAT KFP GEVSL E+EEEEVKK LSI+GI + QILNG+ +
Sbjct: 136 AGPGYKFELSSAVPAIGFPKATLKFPAGEVSLEEKEEEEVKKMLSINGILQHQILNGVFS 195

Query: 209 AQYEEEDLKLRYCYKDEALSFIPTISLPSNALSFALKRQFSPSDKLRLELSL 260
           AQ+ ++DLKLRY YKDE ++FIP+IS+PSNA+SFA KR+FSPSDKL    +L
Sbjct: 196 AQFRDDDLKLRYLYKDEQVAFIPSISMPSNAISFAFKRRFSPSDKLSYWYNL 247

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255645606|gb|ACU23297.1| unknown [Glycine max]

 Score =  299 bits (766), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 144/227 (63%), Positives = 180/227 (79%), Gaps = 2/227 (0%)

Query: 29  SPSPPQPQQQRTSSLFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDN 88
           +P+ P    +R S + SFP RPALRVTSEFDS+S++F HKISCKL DSLAK K SF +  
Sbjct: 10  NPNYPAVDYKRLS-ILSFPRRPALRVTSEFDSESAVFFHKISCKLLDSLAKFKFSFNHSG 68

Query: 89  KG-QIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVAN 147
           KG  I EPQ +F SKHLSLHYDLE+ NA VK+S D+ P L   A+HD+KAQQGEV V+AN
Sbjct: 69  KGGDISEPQFSFVSKHLSLHYDLEDHNALVKTSIDLAPSLQLTASHDLKAQQGEVTVLAN 128

Query: 148 LGDPGYALELSSPVPYVGYPKATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGIC 207
           L DP Y+L+LS+P+P VG PKATF+FPLGE+SL E++EEEV   LS+ G+ KGQ+ NG+C
Sbjct: 129 LADPAYSLQLSTPLPSVGLPKATFRFPLGELSLQEKQEEEVNNLLSVDGVLKGQLFNGLC 188

Query: 208 TAQYEEEDLKLRYCYKDEALSFIPTISLPSNALSFALKRQFSPSDKL 254
           +A Y++E+LKLRY YKD+ +SF+P +SLPSNALSFA KR+F PSDKL
Sbjct: 189 SAHYKDEELKLRYGYKDDEISFLPILSLPSNALSFAFKRRFGPSDKL 235

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356562587|ref|XP_003549551.1| PREDICTED: uncharacterized protein LOC100789625 [Glycine max]

 Score =  299 bits (765), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 141/214 (65%), Positives = 174/214 (81%), Gaps = 1/214 (0%)

Query: 42  SLFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKG-QIFEPQLAFT 100
           S+ SFP RPALRVTSEFDS+S++F HKISCKL DSLAK K SF +  KG  I EPQ +F 
Sbjct: 22  SILSFPRRPALRVTSEFDSESAVFFHKISCKLLDSLAKFKFSFNHSGKGGDISEPQFSFV 81

Query: 101 SKHLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSP 160
           SKHLSLHYDLE+ NA VK+S D+ P L   A+HD+KAQQGEV V+ANL DP Y+L+LS+P
Sbjct: 82  SKHLSLHYDLEDHNALVKTSIDLAPSLQLTASHDLKAQQGEVTVLANLADPAYSLQLSTP 141

Query: 161 VPYVGYPKATFKFPLGEVSLVEREEEEVKKTLSISGIAKGQILNGICTAQYEEEDLKLRY 220
           +P VG PKATF+FPLGE+SL E++EEEV   LS+ G+ KGQ+ NG+C+A Y++E+LKLRY
Sbjct: 142 LPSVGLPKATFRFPLGELSLQEKQEEEVNNLLSVDGVLKGQLFNGLCSAHYKDEELKLRY 201

Query: 221 CYKDEALSFIPTISLPSNALSFALKRQFSPSDKL 254
            YKD+ +SF+P +SLPSNALSFA KR+F PSDKL
Sbjct: 202 GYKDDEISFLPILSLPSNALSFAFKRRFGPSDKL 235

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	268
UNIPROTKB|Q4LDF9	329	OEP37 "Outer envelope pore pro	0.791	0.644	0.625	1.6e-70
TAIR|locus:2051844	343	OEP37 "chloroplast outer envel	0.910	0.711	0.561	4.3e-70

UNIPROTKB|Q4LDF9 OEP37 "Outer envelope pore protein 37, chloroplastic" [Pisum sativum (taxid:3888)]

 Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
 Identities = 135/216 (62%), Positives = 168/216 (77%)

Query:    43 LFSFPSRPALRVTSEFDSDSSIFLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSK 102
             +FSFP RPALR+T+EFDS+S++F HKISCK  DSLAKLK +F N++KG+I EPQ++F SK
Sbjct:    30 IFSFPKRPALRITTEFDSESTVFFHKISCKFLDSLAKLKFAFHNNSKGEIAEPQISFVSK 89

Query:   103 HLSLHYDLEEQNAFVKSSFDVGPKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVP 162
             +LSLHYDLE+ +A VKSS DVGPKL     HDVKAQQGEV +VANL DPGYAL+LS+P+P
Sbjct:    90 YLSLHYDLEDHSALVKSSVDVGPKLKLIGTHDVKAQQGEVTMVANLDDPGYALQLSTPLP 149

Query:   163 YVGYPKATFKFPLGXXXXXXXXXXXX----KKTLSISGIAKGQILNGICTAQYEEEDLKL 218
              +  PKATFKFP G                K +LS+SG  KGQ+L G+CTAQY++++ KL
Sbjct:   150 SIALPKATFKFPQGEISLQEINDHDEDEQVKNSLSVSGTLKGQLLKGLCTAQYKDQEFKL 209

Query:   219 RYCYKDEALSFIPTISLPSNALSFALKRQFSPSDKL 254
             RY YKD+ +SF+P +SLPSNALSFA KR+F PSDKL
Sbjct:   210 RYRYKDDEMSFLPILSLPSNALSFAFKRRFGPSDKL 245

GO:0005216 "ion channel activity" evidence=IDA

GO:0006812 "cation transport" evidence=IDA

GO:0031359 "integral to chloroplast outer membrane" evidence=ISS

GO:0042802 "identical protein binding" evidence=IDA

TAIR|locus:2051844 OEP37 "chloroplast outer envelope protein 37" [Arabidopsis thaliana (taxid:3702)]

 Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
 Identities = 142/253 (56%), Positives = 182/253 (71%)

Query:     5 SPPSPSLQIPNHMVXXXXXXXXXXXXXXXXXXXXRTSSLFSFPSRPALRVTSEFDSDSSI 64
             +PP PS   P H +                     T S     +RP LRVTSEFDSDS +
Sbjct:    13 TPPPPSSPSPTHQIQSGTSELSPPSRPPCS-----TLSFLKTANRPKLRVTSEFDSDSLL 67

Query:    65 FLHKISCKLFDSLAKLKVSFQNDNKGQIFEPQLAFTSKHLSLHYDLEEQNAFVKSSFDVG 124
             FL+K+SCKLFD+LAKLK+SFQN+++ +I +PQ++FTSKH+S+ YD+EE+N F+KS+ DV 
Sbjct:    68 FLNKVSCKLFDNLAKLKLSFQNNSQREISQPQVSFTSKHVSVLYDVEEKNTFIKSTLDVH 127

Query:   125 PKLHFRAAHDVKAQQGEVGVVANLGDPGYALELSSPVPYVGYPKATFKFPLGXXXXXXXX 184
             P+L  RA H+VKAQQGEV + ANL +PGY+LELSSPVP +GYP+AT KFPLG        
Sbjct:   128 PRLQLRALHNVKAQQGEVAMEANLTEPGYSLELSSPVP-IGYPRATLKFPLGEISLQEKD 186

Query:   185 XXXX---KKTLSISGIAKGQILNGICTAQYEEEDLKLRYCYKDEALSFIPTISLPSNALS 241
                    K+TLS++GI K Q++NG+CTA Y +E+L+LRY YKD+ALSFIP+ISLPSNA S
Sbjct:   187 EEEEEKQKRTLSVNGILKRQVMNGVCTALYTDEELRLRYAYKDDALSFIPSISLPSNAAS 246

Query:   242 FALKRQFSPSDKL 254
             FA KR+FSPSDKL
Sbjct:   247 FAFKRRFSPSDKL 259


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      268       236   0.00089  113 3  11 22  0.41    33
                                                     32  0.43    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  568 (60 KB)
  Total size of DFA:  164 KB (2098 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.20u 0.12s 19.32t   Elapsed:  00:00:01
  Total cpu time:  19.20u 0.12s 19.32t   Elapsed:  00:00:01
  Start:  Fri May 10 05:39:27 2013   End:  Fri May 10 05:39:28 2013

GO:0005634 "nucleus" evidence=ISM

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009536 "plastid" evidence=IDA

GO:0005216 "ion channel activity" evidence=IDA

GO:0006812 "cation transport" evidence=IDA

GO:0031359 "integral to chloroplast outer membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O80565	OEP37_ARATH	No assigned EC number	0.5961	0.9440	0.7376	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.0209001901 hypothetical protein (271 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	268
PHA01732	94	proline-rich protein	95.16
KOG1924	1102	consensus RhoA GTPase effector DIA/Diaphanous [Sig	91.01
PF01690	465	PLRV_ORF5: Potato leaf roll virus readthrough prot	88.9
KOG1924	1102	consensus RhoA GTPase effector DIA/Diaphanous [Sig	83.99

>PHA01732 proline-rich protein

Probab=95.16  E-value=0.025  Score=46.03  Aligned_cols=20  Identities=25%  Similarity=0.335  Sum_probs=15.7

Q ss_pred             ccccceeEEeeecCCCCCCC
Q 024412           74 FDSLAKLKVSFQNDNKGQIF   93 (268)
Q Consensus        74 l~GlAKLrLsfq~D~sG~~~   93 (268)
                      ..|.|.||+--|+..+|+++
T Consensus        61 a~gTasLrIpkqtg~~g~~s   80 (94)
T PHA01732         61 AGGTASLRIPKQSGTQGSIS   80 (94)
T ss_pred             ccCcceeEeecccccccccc
Confidence            46888899988888888754

>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]

Probab=91.01  E-value=0.35  Score=51.90  Aligned_cols=19  Identities=21%  Similarity=0.249  Sum_probs=7.9

Q ss_pred             cCcceeeeeecccccccce
Q 024412          123 VGPKLHFRAAHDVKAQQGE  141 (268)
Q Consensus       123 lg~~l~lk~~hDvKAqQGE  141 (268)
                      +--+|.++.+...|++.++
T Consensus       658 lfakL~~~Fatq~k~~k~~  676 (1102)
T KOG1924|consen  658 LFAKLALKFATQPKVKKEQ  676 (1102)
T ss_pred             HHHHHHHHhhccccccccc
Confidence            3334444444444444433

>PF01690 PLRV_ORF5: Potato leaf roll virus readthrough protein; InterPro: IPR002929 This family consists mainly of the Potato leafroll virus (PLrV) read through protein otherwise known as the minor capsid protein

Probab=88.90  E-value=0.31  Score=48.81  Aligned_cols=8  Identities=13%  Similarity=0.638  Sum_probs=3.7

Q ss_pred             Cceeeeee
Q 024412           50 PALRVTSE   57 (268)
Q Consensus        50 p~lrvtsE   57 (268)
                      |-.+|.+.
T Consensus        40 p~~~I~tr   47 (465)
T PF01690_consen   40 PQTKISTR   47 (465)
T ss_pred             cceeeecc
Confidence            44445444

This is generated via a readthrough of open reading frame 3, the coat protein, allowing transcription of open reading frame 5 to give an extended coat protein with a large C-terminal addition or read through domain []. The read through protein is essential for the circulative aphid transmission of PLrV [] and Beet western yellows virus []. The N-terminal region of the luteovirus readthrough domain determines virus binding to Buchnera GroEL and is essential for virus persistence in the aphid [].; GO: 0019028 viral capsid

>KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton]

Probab=83.99  E-value=1.1  Score=48.30  Aligned_cols=11  Identities=36%  Similarity=0.646  Sum_probs=5.4

Q ss_pred             cceeEEeeecC
Q 024412           77 LAKLKVSFQND   87 (268)
Q Consensus        77 lAKLrLsfq~D   87 (268)
                      +|||++-|.+-
T Consensus       659 fakL~~~Fatq  669 (1102)
T KOG1924|consen  659 FAKLALKFATQ  669 (1102)
T ss_pred             HHHHHHHhhcc
Confidence            45555555443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	268
3iot_A	449	Maltose-binding protein, huntingtin fusion protei;	94.01

>3iot_A Maltose-binding protein, huntingtin fusion protei; HTT-EX1, HD, sugar transport, transport, apoptos disease mutation, nucleus; 3.50A {Escherichia coli k-12} PDB: 3io6_A 3io4_A 3ior_A 3iou_A 3iov_A 3iow_A

Probab=94.01  E-value=0.0096  Score=52.78  Aligned_cols=6  Identities=17%  Similarity=-0.075  Sum_probs=0.0

Q ss_pred             eeeeec
Q 024412           54 VTSEFD   59 (268)
Q Consensus        54 vtsEfD   59 (268)
                      +|+...
T Consensus       435 ~~~~~~  440 (449)
T 3iot_A          435 ITAGKL  440 (449)
T ss_dssp             ------
T ss_pred             cCCCcc
Confidence            444333

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00