Citrus Sinensis ID: 024420

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
MRSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ
ccccHHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHccccccEEEcccEEEEcccccccccEEEEEEEcccccEEEcccccccccccEEEEEEEccccccEEEEEEEccccccccccccEEEcccccccccEEEcccEEEEcEEEcccccccccccccccccccccEEccccccHHHHHHHHHHHHHcccHHHHccccccccEEcccHHHHHHHHHHHHccccccccc
ccccHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccHHHHHHHHHcccEEEEEEcccEEEEccccccccEEEEEEEEccccEEEEcccccccccccccEEEEEEccccccEEEEEEcccccccccccEEEEEcccccEEEEEEccccHHHHHHHHccccccccccccEEEEEEccEEEEccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccccc
MRSGVPNFCAVALALNdlgykavgirldsgdlaylSCEARKFFRTIekefgvpdfekmSITASNDLNEETLDALNKqghevdafgIGTYLVTCYAQAALGCVFKLVeinkqpriklsedvskvsipckkrsyrlygkegyplvdimtgenepppkvgerilcrhpfneskrayvvpQKVEELLKcywpgssggdypmvfgDVQFLNKrredlptlKDTRERCIKQLEQMrpdhmrrlnptpykvsvSAKLYDFIHFLwlneapvgelq
MRSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEkefgvpdfEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKqpriklsedvskvsipckkrsyrlygkegypLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLNkrredlptlkdTRERCIKQleqmrpdhmrrlnptPYKVSVSAKLYDFIHFLWLNEAPVGELQ
MRSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ
*****PNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITA*******TLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTG*******VGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKR*******************************TPYKVSVSAKLYDFIHFLWLNE*******
MRSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIK*********IPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEA*V****
MRSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ
*RSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAP***L*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiii
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MRSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTPYKVSVSAKLYDFIHFLWLNEAPVGELQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query268 2.2.26 [Sep-21-2011]
Q9VQX4555 Nicotinate phosphoribosyl no no 0.932 0.450 0.578 7e-88
Q55G10589 Nicotinate phosphoribosyl yes no 0.940 0.427 0.52 6e-78
Q95XX1562 Nicotinate phosphoribosyl yes no 0.932 0.444 0.522 2e-74
Q6XQN6538 Nicotinate phosphoribosyl yes no 0.910 0.453 0.395 1e-46
Q6XQN1538 Nicotinate phosphoribosyl yes no 0.888 0.442 0.408 1e-44
Q8CC86538 Nicotinate phosphoribosyl yes no 0.891 0.444 0.398 8e-44
A5PK51538 Nicotinate phosphoribosyl yes no 0.891 0.444 0.410 3e-43
Q6P3H4546 Nicotinate phosphoribosyl yes no 0.873 0.428 0.368 2e-42
O32090490 Nicotinate phosphoribosyl yes no 0.492 0.269 0.423 4e-21
O53770463 Nicotinate phosphoribosyl yes no 0.373 0.215 0.357 5e-07
>sp|Q9VQX4|PNCB_DROME Nicotinate phosphoribosyltransferase OS=Drosophila melanogaster GN=CG3714 PE=2 SV=2 Back     alignment and function desciption
 Score =  323 bits (828), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 154/266 (57%), Positives = 193/266 (72%), Gaps = 16/266 (6%)

Query: 2   RSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSIT 61
           RSG+ NF AVALALNDLGY A+GIR+DSGDLAYLSC AR+ F  + + F VP F K++I 
Sbjct: 305 RSGLLNFSAVALALNDLGYHALGIRIDSGDLAYLSCLARETFEKVAERFKVPWFNKLTIV 364

Query: 62  ASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVS 121
           ASND+NE+T+ +LN+QGH++D FGIGT+LVTC  Q ALGCV+KLVEIN QPRIKLS+DV 
Sbjct: 365 ASNDINEDTILSLNEQGHKIDCFGIGTHLVTCQRQPALGCVYKLVEINGQPRIKLSQDVE 424

Query: 122 KVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVEE 181
           KV++P  K +YRLY  +G+ L+D++   +EPPP VG+++LCRHPF ESKRAYV+P  VE 
Sbjct: 425 KVTMPGNKNAYRLYSADGHALIDLLQKVSEPPPAVGQKVLCRHPFQESKRAYVIPSHVES 484

Query: 182 LLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPTP 241
           L K YW                   K  + LPTL+  RE+    L+ +R DH R LNPTP
Sbjct: 485 LYKVYWKSG----------------KICQQLPTLEQVREKVQISLKTLRNDHKRTLNPTP 528

Query: 242 YKVSVSAKLYDFIHFLWLNEAPVGEL 267
           YKV+VS  LY+FIH LWL  AP+GEL
Sbjct: 529 YKVAVSDNLYNFIHDLWLQNAPIGEL 554
Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN).
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: 1EC: 1
>sp|Q55G10|PNCB_DICDI Nicotinate phosphoribosyltransferase OS=Dictyostelium discoideum GN=naprt PE=2 SV=1 Back     alignment and function description
>sp|Q95XX1|PNCB_CAEEL Nicotinate phosphoribosyltransferase OS=Caenorhabditis elegans GN=Y54G2A.17 PE=2 SV=3 Back     alignment and function description
>sp|Q6XQN6|PNCB_HUMAN Nicotinate phosphoribosyltransferase OS=Homo sapiens GN=NAPRT1 PE=1 SV=2 Back     alignment and function description
>sp|Q6XQN1|PNCB_RAT Nicotinate phosphoribosyltransferase OS=Rattus norvegicus GN=Naprt1 PE=2 SV=1 Back     alignment and function description
>sp|Q8CC86|PNCB_MOUSE Nicotinate phosphoribosyltransferase OS=Mus musculus GN=Naprt1 PE=2 SV=1 Back     alignment and function description
>sp|A5PK51|PNCB_BOVIN Nicotinate phosphoribosyltransferase OS=Bos taurus GN=NAPRT1 PE=2 SV=2 Back     alignment and function description
>sp|Q6P3H4|PNCB_DANRE Nicotinate phosphoribosyltransferase OS=Danio rerio GN=naprt1 PE=2 SV=2 Back     alignment and function description
>sp|O32090|PNCB_BACSU Nicotinate phosphoribosyltransferase OS=Bacillus subtilis (strain 168) GN=pncB PE=3 SV=1 Back     alignment and function description
>sp|O53770|PNCB2_MYCTU Nicotinate phosphoribosyltransferase pncB2 OS=Mycobacterium tuberculosis GN=pncB2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query268
224081698 559 predicted protein [Populus trichocarpa] 0.947 0.454 0.891 1e-137
224094304 559 predicted protein [Populus trichocarpa] 0.947 0.454 0.876 1e-135
255565240 561 nicotinate phosphoribosyltransferase, pu 0.947 0.452 0.880 1e-134
356511877 557 PREDICTED: nicotinate phosphoribosyltran 0.947 0.456 0.847 1e-131
225438748 561 PREDICTED: nicotinate phosphoribosyltran 0.947 0.452 0.858 1e-130
296082406 524 unnamed protein product [Vitis vinifera] 0.947 0.484 0.858 1e-130
449463957 561 PREDICTED: nicotinate phosphoribosyltran 0.947 0.452 0.854 1e-130
449527307 555 PREDICTED: nicotinate phosphoribosyltran 0.947 0.457 0.854 1e-130
37787327 557 nicotinate phosphoribosyltransferase-lik 0.947 0.456 0.843 1e-129
343172724 559 nicotinate phosphoribosyltransferase, pa 0.947 0.454 0.828 1e-128
>gi|224081698|ref|XP_002306477.1| predicted protein [Populus trichocarpa] gi|222855926|gb|EEE93473.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  491 bits (1265), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 239/268 (89%), Positives = 245/268 (91%), Gaps = 14/268 (5%)

Query: 1   MRSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSI 60
           MRSG+PNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFR IEKEFGVP F KMSI
Sbjct: 306 MRSGIPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRAIEKEFGVPGFGKMSI 365

Query: 61  TASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDV 120
           TASNDLNEETLDALNKQGHEVDA+GIGTYLVTCYAQAALGCVFKLVEIN QPRIKLSEDV
Sbjct: 366 TASNDLNEETLDALNKQGHEVDAYGIGTYLVTCYAQAALGCVFKLVEINNQPRIKLSEDV 425

Query: 121 SKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVE 180
           SKVSIPCKKRSYRLYG+EGYPLVDIMTGENEP PKVGERILCRHPFNESKRAYVVPQ+VE
Sbjct: 426 SKVSIPCKKRSYRLYGREGYPLVDIMTGENEPSPKVGERILCRHPFNESKRAYVVPQQVE 485

Query: 181 ELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPT 240
           ELLKCYWPGSS              +K REDLP LKD R+RCIKQLE MRPDHMRRLNPT
Sbjct: 486 ELLKCYWPGSS--------------DKPREDLPPLKDIRDRCIKQLEIMRPDHMRRLNPT 531

Query: 241 PYKVSVSAKLYDFIHFLWLNEAPVGELQ 268
           PYKVSVSAKLYDFIHFLWLNEAPVGELQ
Sbjct: 532 PYKVSVSAKLYDFIHFLWLNEAPVGELQ 559

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224094304|ref|XP_002310133.1| predicted protein [Populus trichocarpa] gi|222853036|gb|EEE90583.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255565240|ref|XP_002523612.1| nicotinate phosphoribosyltransferase, putative [Ricinus communis] gi|223537174|gb|EEF38807.1| nicotinate phosphoribosyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356511877|ref|XP_003524648.1| PREDICTED: nicotinate phosphoribosyltransferase-like [Glycine max] Back     alignment and taxonomy information
>gi|225438748|ref|XP_002282786.1| PREDICTED: nicotinate phosphoribosyltransferase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|296082406|emb|CBI21411.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449463957|ref|XP_004149696.1| PREDICTED: nicotinate phosphoribosyltransferase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449527307|ref|XP_004170653.1| PREDICTED: nicotinate phosphoribosyltransferase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|37787327|gb|AAP69614.1| nicotinate phosphoribosyltransferase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|343172724|gb|AEL99065.1| nicotinate phosphoribosyltransferase, partial [Silene latifolia] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query268
TAIR|locus:2046872557 NAPRT2 "nicotinate phosphoribo 0.947 0.456 0.828 1.8e-117
TAIR|locus:2115095559 NAPRT1 "nicotinate phosphoribo 0.944 0.452 0.816 3.1e-115
FB|FBgn0031589555 CG3714 [Drosophila melanogaste 0.932 0.450 0.586 4.2e-79
DICTYBASE|DDB_G0268472589 naprt "nicotinate phosphoribos 0.940 0.427 0.52 2.6e-70
WB|WBGene00021882562 Y54G2A.17 [Caenorhabditis eleg 0.932 0.444 0.522 2.1e-68
UNIPROTKB|Q95XX1562 Y54G2A.17 "Nicotinate phosphor 0.932 0.444 0.522 2.1e-68
UNIPROTKB|A5PK51538 NAPRT1 "Nicotinate phosphoribo 0.686 0.342 0.470 5.3e-45
UNIPROTKB|Q6XQN6538 NAPRT1 "Nicotinate phosphoribo 0.697 0.347 0.465 6.7e-45
MGI|MGI:2442664538 Naprt1 "nicotinate phosphoribo 0.686 0.342 0.464 1.4e-44
UNIPROTKB|F1NA80383 NAPRT1 "Uncharacterized protei 0.876 0.613 0.406 1.5e-44
TAIR|locus:2046872 NAPRT2 "nicotinate phosphoribosyltransferase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1157 (412.3 bits), Expect = 1.8e-117, P = 1.8e-117
 Identities = 222/268 (82%), Positives = 238/268 (88%)

Query:     1 MRSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSI 60
             M+SG+PNFCAVALALND GYKA+GIRLDSGDLAYLS EAR FF T+E+E  VP F KM +
Sbjct:   304 MKSGIPNFCAVALALNDFGYKALGIRLDSGDLAYLSREARNFFCTVERELKVPGFGKMVV 363

Query:    61 TASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDV 120
             TASNDLNEET+DALNKQGHEVDAFGIGTYLVTCY+QAALGCVFKLVEIN QPRIKLSEDV
Sbjct:   364 TASNDLNEETIDALNKQGHEVDAFGIGTYLVTCYSQAALGCVFKLVEINNQPRIKLSEDV 423

Query:   121 SKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVE 180
             +KVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGER+LCRHPFNESKRAYVVPQ+VE
Sbjct:   424 TKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERLLCRHPFNESKRAYVVPQRVE 483

Query:   181 ELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPT 240
             ELLKCYW GS+              ++ RE LP LK+ R+RCIKQLE MRPDHMRRLNPT
Sbjct:   484 ELLKCYWRGSA--------------DEAREVLPPLKEIRDRCIKQLENMRPDHMRRLNPT 529

Query:   241 PYKVSVSAKLYDFIHFLWLNEAPVGELQ 268
             PYKVSVSAKLYDFIHFLWLNEAPVGELQ
Sbjct:   530 PYKVSVSAKLYDFIHFLWLNEAPVGELQ 557
GO:0004516 "nicotinate phosphoribosyltransferase activity" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM;IEA
GO:0009435 "NAD biosynthetic process" evidence=IEA
GO:0019358 "nicotinate nucleotide salvage" evidence=IEA;ISS
GO:0019363 "pyridine nucleotide biosynthetic process" evidence=IEA
TAIR|locus:2115095 NAPRT1 "nicotinate phosphoribosyltransferase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0031589 CG3714 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0268472 naprt "nicotinate phosphoribosyltransferase-like protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
WB|WBGene00021882 Y54G2A.17 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|Q95XX1 Y54G2A.17 "Nicotinate phosphoribosyltransferase" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|A5PK51 NAPRT1 "Nicotinate phosphoribosyltransferase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q6XQN6 NAPRT1 "Nicotinate phosphoribosyltransferase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2442664 Naprt1 "nicotinate phosphoribosyltransferase domain containing 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1NA80 NAPRT1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.2LOW CONFIDENCE prediction!
4th Layer2.4.2.11LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_V0531
nicotinate phosphoribosyltransferase (EC-2.4.2.11) (559 aa)
(Populus trichocarpa)
Predicted Functional Partners:
estExt_fgenesh4_pm.C_LG_VIII0550
nicotinate-nucleotide diphosphorylase (carboxylating) (EC-2.4.2.19) (329 aa)
•    •• 0.941
gw1.XIII.983.1
nicotinamide-nucleotide adenylyltransferase/nicotinate-nucleotide adenylyltransferase (EC-2.7.7 [...] (237 aa)
•    •• 0.912
gw1.70.673.1
nicotinamide-nucleotide adenylyltransferase/nicotinate-nucleotide adenylyltransferase (EC-2.7.7 [...] (237 aa)
•    •• 0.912
fgenesh4_pm.C_scaffold_308000002
nicotinamide-nucleotide adenylyltransferase/nicotinate-nucleotide adenylyltransferase (EC-2.7.7 [...] (247 aa)
•    •• 0.911
grail3.0151001701
hypothetical protein (395 aa)
     •  0.899
grail3.0006001701
hypothetical protein (247 aa)
     •  0.899
fgenesh4_pg.C_scaffold_145000062
hypothetical protein (414 aa)
     •  0.899
eugene3.00440120
hypothetical protein (390 aa)
     •  0.899
estExt_fgenesh4_pm.C_970013
SubName- Full=Putative uncharacterized protein; (386 aa)
     •  0.899
gw1.VII.325.1
6,7-dimethyl-8-ribityllumazine synthase (180 aa)
      • 0.449

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query268
PLN02885545 PLN02885, PLN02885, nicotinate phosphoribosyltrans 0.0
PRK09243464 PRK09243, PRK09243, nicotinate phosphoribosyltrans 6e-59
TIGR01513443 TIGR01513, NAPRTase_put, putative nicotinate phosp 3e-53
cd01570327 cd01570, NAPRTase_A, Nicotinate phosphoribosyltran 4e-50
pfam04095245 pfam04095, NAPRTase, Nicotinate phosphoribosyltran 2e-31
PRK12484443 PRK12484, PRK12484, nicotinate phosphoribosyltrans 1e-28
cd01567343 cd01567, NAPRTase_PncB, Nicotinate phosphoribosylt 9e-26
COG1488405 COG1488, PncB, Nicotinic acid phosphoribosyltransf 2e-22
cd00516281 cd00516, PRTase_typeII, Phosphoribosyltransferase 1e-14
cd01401377 cd01401, PncB_like, Nicotinate phosphoribosyltrans 1e-04
PRK05321400 PRK05321, PRK05321, nicotinate phosphoribosyltrans 1e-04
cd01571302 cd01571, NAPRTase_B, Nicotinate phosphoribosyltran 2e-04
>gnl|CDD|178473 PLN02885, PLN02885, nicotinate phosphoribosyltransferase Back     alignment and domain information 
 Score =  566 bits (1462), Expect = 0.0
 Identities = 228/268 (85%), Positives = 243/268 (90%), Gaps = 14/268 (5%)

Query: 1   MRSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSI 60
           M+SG+PNFCAVALALNDLGYKAVGIRLDSGDLAYLS EARKFFRTIE+E GVP F KMSI
Sbjct: 292 MKSGIPNFCAVALALNDLGYKAVGIRLDSGDLAYLSLEARKFFRTIEEELGVPGFGKMSI 351

Query: 61  TASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDV 120
           TASND+NEETLDALNKQGHE+DAFGIGT+LVTCYAQ ALGCV+KLVEIN QPRIKLSEDV
Sbjct: 352 TASNDINEETLDALNKQGHEIDAFGIGTHLVTCYAQPALGCVYKLVEINGQPRIKLSEDV 411

Query: 121 SKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVVPQKVE 180
            KV+IPCKKR YRLYGKEGYPLVD+MTGENEPPPKVGERILCRHPFNESKRAYVVPQ+VE
Sbjct: 412 EKVTIPCKKRCYRLYGKEGYPLVDLMTGENEPPPKVGERILCRHPFNESKRAYVVPQRVE 471

Query: 181 ELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPT 240
           ELLKCYW GSSG              K RE+LP+LK+ RERC+KQLE+MRPDHMRRLNPT
Sbjct: 472 ELLKCYWDGSSG--------------KPREELPSLKEIRERCMKQLERMRPDHMRRLNPT 517

Query: 241 PYKVSVSAKLYDFIHFLWLNEAPVGELQ 268
           PYKVSVSAKLYDFIHFLWLNEAPVGELQ
Sbjct: 518 PYKVSVSAKLYDFIHFLWLNEAPVGELQ 545

Length = 545
>gnl|CDD|236426 PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated Back     alignment and domain information
>gnl|CDD|233446 TIGR01513, NAPRTase_put, putative nicotinate phosphoribosyltransferase Back     alignment and domain information
>gnl|CDD|238804 cd01570, NAPRTase_A, Nicotinate phosphoribosyltransferase (NAPRTase), subgroup A Back     alignment and domain information
>gnl|CDD|202885 pfam04095, NAPRTase, Nicotinate phosphoribosyltransferase (NAPRTase) family Back     alignment and domain information
>gnl|CDD|237112 PRK12484, PRK12484, nicotinate phosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|238801 cd01567, NAPRTase_PncB, Nicotinate phosphoribosyltransferase (NAPRTase) family Back     alignment and domain information
>gnl|CDD|224405 COG1488, PncB, Nicotinic acid phosphoribosyltransferase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|238286 cd00516, PRTase_typeII, Phosphoribosyltransferase (PRTase) type II; This family contains two enzymes that play an important role in NAD production by either allowing quinolinic acid (QA) , quinolinate phosphoribosyl transferase (QAPRTase), or nicotinic acid (NA), nicotinate phosphoribosyltransferase (NAPRTase), to be used in the synthesis of NAD Back     alignment and domain information
>gnl|CDD|238695 cd01401, PncB_like, Nicotinate phosphoribosyltransferase (NAPRTase), related to PncB Back     alignment and domain information
>gnl|CDD|235406 PRK05321, PRK05321, nicotinate phosphoribosyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|238805 cd01571, NAPRTase_B, Nicotinate phosphoribosyltransferase (NAPRTase), subgroup B Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 268
PLN02885545 nicotinate phosphoribosyltransferase 100.0
PRK09243464 nicotinate phosphoribosyltransferase; Validated 100.0
TIGR01513443 NAPRTase_put putative nicotinate phosphoribosyltra 100.0
PRK12484443 nicotinate phosphoribosyltransferase; Provisional 100.0
PHA02594470 nadV nicotinamide phosphoribosyl transferase; Prov 100.0
PRK09198463 putative nicotinate phosphoribosyltransferase; Pro 100.0
KOG2511420 consensus Nicotinic acid phosphoribosyltransferase 100.0
COG1488405 PncB Nicotinic acid phosphoribosyltransferase [Coe 99.97
cd01401377 PncB_like Nicotinate phosphoribosyltransferase (NA 99.97
PRK05321400 nicotinate phosphoribosyltransferase; Provisional 99.96
TIGR01514394 NAPRTase nicotinate phosphoribosyltransferase. Thi 99.96
PF04095245 NAPRTase: Nicotinate phosphoribosyltransferase (NA 99.95
cd01569407 PBEF_like pre-B-cell colony-enhancing factor (PBEF 99.94
cd01570327 NAPRTase_A Nicotinate phosphoribosyltransferase (N 99.93
PRK07188352 nicotinate phosphoribosyltransferase; Provisional 99.89
cd01567343 NAPRTase_PncB Nicotinate phosphoribosyltransferase 99.83
PRK08662343 nicotinate phosphoribosyltransferase; Reviewed 99.73
cd01571302 NAPRTase_B Nicotinate phosphoribosyltransferase (N 99.64
cd00516281 PRTase_typeII Phosphoribosyltransferase (PRTase) t 99.22
PF01729169 QRPTase_C: Quinolinate phosphoribosyl transferase, 97.76
PRK08385278 nicotinate-nucleotide pyrophosphorylase; Provision 96.77
PRK05848273 nicotinate-nucleotide pyrophosphorylase; Provision 96.72
PRK07896289 nicotinate-nucleotide pyrophosphorylase; Provision 96.11
cd01573272 modD_like ModD; Quinolinate phosphoribosyl transfe 95.53
PRK07428288 nicotinate-nucleotide pyrophosphorylase; Provision 94.93
PRK09016296 quinolinate phosphoribosyltransferase; Validated 94.48
PRK06106281 nicotinate-nucleotide pyrophosphorylase; Provision 93.97
PRK05742277 nicotinate-nucleotide pyrophosphorylase; Provision 93.81
TIGR00078265 nadC nicotinate-nucleotide pyrophosphorylase. Syno 92.65
cd00452190 KDPG_aldolase KDPG and KHG aldolase. This family b 91.66
cd01568269 QPRTase_NadC Quinolinate phosphoribosyl transferas 91.17
PRK06552213 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 90.62
TIGR00640132 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal 90.58
cd01572268 QPRTase Quinolinate phosphoribosyl transferase (QA 87.68
PRK06978294 nicotinate-nucleotide pyrophosphorylase; Provision 87.53
cd02071122 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 bin 87.39
PRK06096284 molybdenum transport protein ModD; Provisional 86.64
PRK05096346 guanosine 5'-monophosphate oxidoreductase; Provisi 86.41
PRK07114222 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 86.32
PRK07455187 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 86.09
TIGR01182204 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxypho 85.18
COG2185143 Sbm Methylmalonyl-CoA mutase, C-terminal domain/su 84.66
PRK05718212 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 84.5
cd04726202 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxyl 84.26
PRK07807479 inosine 5-monophosphate dehydrogenase; Validated 83.38
cd02072128 Glm_B12_BD B12 binding domain of glutamate mutase 83.14
TIGR01305343 GMP_reduct_1 guanosine monophosphate reductase, eu 82.01
TIGR03128206 RuMP_HxlA 3-hexulose-6-phosphate synthase. at the 81.66
cd04729219 NanE N-acetylmannosamine-6-phosphate epimerase (Na 81.47
PRK08072277 nicotinate-nucleotide pyrophosphorylase; Provision 81.31
>PLN02885 nicotinate phosphoribosyltransferase Back     alignment and domain information 
Probab=100.00  E-value=3.1e-71  Score=548.77  Aligned_cols=254  Identities=90%  Similarity=1.449  Sum_probs=245.5

Q ss_pred             CcCchHHHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCc
Q 024420            1 MRSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHE   80 (268)
Q Consensus         1 l~sGv~nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~   80 (268)
                      ++||++|||+||++|+++|+++.|||+|||||++||+++|++||+++|+|+++|+++++|++||||||++|.+|.++|++
T Consensus       292 l~sg~~n~~~v~~~l~~~g~~~~GVRlDSGDl~~ls~~~r~~~~~~~~~l~~~g~~~~kIv~Sn~Lde~~i~~L~~~g~~  371 (545)
T PLN02885        292 MKSGIPNFCAVALALNDLGYKAVGIRLDSGDLAYLSLEARKFFRTIEEELGVPGFGKMSITASNDINEETLDALNKQGHE  371 (545)
T ss_pred             HHHHHHHHHHHHHHHHhcCcccCeeEECCCChHHHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCCCCHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccEEeecCcccccCCCCccceEEEEeEECCccccccCCCCCCCCCCccceeeeeccCCCCeeeeEEecCCCCCCCCCCce
Q 024420           81 VDAFGIGTYLVTCYAQAALGCVFKLVEINKQPRIKLSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERI  160 (268)
Q Consensus        81 id~fGVGT~Lvt~~~~p~l~~vyKLve~~g~P~~K~S~~~~K~t~PG~K~vyR~~~~~g~~~~D~i~l~~e~~~~~~~~~  160 (268)
                      ||+|||||+|+||.++|+||||||||+++|+|++|+|++++|.|+||+|+|||+|+++|++.+|+|++.+|++|..++++
T Consensus       372 id~fGVGT~LvT~~~~p~l~~VyKLVe~~g~p~~KlS~~~~K~t~PG~K~vyR~~~~~g~~~~D~i~l~~e~~~~~~~~~  451 (545)
T PLN02885        372 IDAFGIGTHLVTCYAQPALGCVYKLVEINGQPRIKLSEDVEKVTIPCKKRCYRLYGKEGYPLVDLMTGENEPPPKVGERI  451 (545)
T ss_pred             ccEEecCCccccCCCCCCCceEEEEEEECCeeeeEecCCCCCccCCcceEEEEEEcCCCCEEEEEEecCCCCCCCCCCce
Confidence            99999999999999999999999999999999999999999999999999999998789999999999999767778999


Q ss_pred             eecCCCCccccccccCccccccceeeecCCCCCCCccccccccccccccCCCCcHHHHHHHHHHHHhcCChhhhhccCCc
Q 024420          161 LCRHPFNESKRAYVVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMRRLNPT  240 (268)
Q Consensus       161 ~~~~p~~~~~~~~i~~~~~e~LL~~v~~~~~G~~~~~~~~~~~~~~~~~~~~~sL~~iR~~~~~~l~~l~~~~~r~~~p~  240 (268)
                      .|+||+++|+++.+.+..+++||+|||++++|              +++++.|+|++||+|+++||++|||+++|++||+
T Consensus       452 ~~~~p~~~~~~~~~~~~~~~~Ll~~~~~~g~g--------------~~~~~~~~l~~~r~~~~~~l~~l~~~~~r~~~p~  517 (545)
T PLN02885        452 LCRHPFNESKRAYVVPQRVEELLKCYWDGSSG--------------KPREELPSLKEIRERCMKQLERMRPDHMRRLNPT  517 (545)
T ss_pred             EEeCCccchheeeeccccHHhhhHHHeECCCC--------------cCcCCCCCHHHHHHHHHHHHhhCCHHHHhccCCc
Confidence            99999999999999999999999999987778              8889999999999999999999999999999999


Q ss_pred             ccccccCHHHHHHHHHHHHccCCCCCCC
Q 024420          241 PYKVSVSAKLYDFIHFLWLNEAPVGELQ  268 (268)
Q Consensus       241 ~Y~V~ls~~L~~l~~~L~~~~~~~~~~~  268 (268)
                      +|+|++|++|++++++||+++++++|++
T Consensus       518 ~y~V~~s~~l~~~~~~l~~~~~~~~~~~  545 (545)
T PLN02885        518 PYKVSVSAKLYDFIHFLWLNEAPVGELQ  545 (545)
T ss_pred             cceeccCHHHHHHHHHHHHhcCccccCC
Confidence            9999999999999999999988888864

>PRK09243 nicotinate phosphoribosyltransferase; Validated Back     alignment and domain information
>TIGR01513 NAPRTase_put putative nicotinate phosphoribosyltransferase Back     alignment and domain information
>PRK12484 nicotinate phosphoribosyltransferase; Provisional Back     alignment and domain information
>PHA02594 nadV nicotinamide phosphoribosyl transferase; Provisional Back     alignment and domain information
>PRK09198 putative nicotinate phosphoribosyltransferase; Provisional Back     alignment and domain information
>KOG2511 consensus Nicotinic acid phosphoribosyltransferase [Coenzyme transport and metabolism] Back     alignment and domain information
>COG1488 PncB Nicotinic acid phosphoribosyltransferase [Coenzyme metabolism] Back     alignment and domain information
>cd01401 PncB_like Nicotinate phosphoribosyltransferase (NAPRTase), related to PncB Back     alignment and domain information
>PRK05321 nicotinate phosphoribosyltransferase; Provisional Back     alignment and domain information
>TIGR01514 NAPRTase nicotinate phosphoribosyltransferase Back     alignment and domain information
>PF04095 NAPRTase: Nicotinate phosphoribosyltransferase (NAPRTase) family; InterPro: IPR015977 Nicotinate phosphoribosyltransferase (2 Back     alignment and domain information
>cd01569 PBEF_like pre-B-cell colony-enhancing factor (PBEF)-like Back     alignment and domain information
>cd01570 NAPRTase_A Nicotinate phosphoribosyltransferase (NAPRTase), subgroup A Back     alignment and domain information
>PRK07188 nicotinate phosphoribosyltransferase; Provisional Back     alignment and domain information
>cd01567 NAPRTase_PncB Nicotinate phosphoribosyltransferase (NAPRTase) family Back     alignment and domain information
>PRK08662 nicotinate phosphoribosyltransferase; Reviewed Back     alignment and domain information
>cd01571 NAPRTase_B Nicotinate phosphoribosyltransferase (NAPRTase), subgroup B Back     alignment and domain information
>cd00516 PRTase_typeII Phosphoribosyltransferase (PRTase) type II; This family contains two enzymes that play an important role in NAD production by either allowing quinolinic acid (QA) , quinolinate phosphoribosyl transferase (QAPRTase), or nicotinic acid (NA), nicotinate phosphoribosyltransferase (NAPRTase), to be used in the synthesis of NAD Back     alignment and domain information
>PF01729 QRPTase_C: Quinolinate phosphoribosyl transferase, C-terminal domain; InterPro: IPR002638 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2 Back     alignment and domain information
>PRK08385 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PRK05848 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PRK07896 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>cd01573 modD_like ModD; Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase) present in some modABC operons in bacteria, which are involved in molybdate transport Back     alignment and domain information
>PRK07428 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PRK09016 quinolinate phosphoribosyltransferase; Validated Back     alignment and domain information
>PRK06106 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PRK05742 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>TIGR00078 nadC nicotinate-nucleotide pyrophosphorylase Back     alignment and domain information
>cd00452 KDPG_aldolase KDPG and KHG aldolase Back     alignment and domain information
>cd01568 QPRTase_NadC Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes Back     alignment and domain information
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain Back     alignment and domain information
>cd01572 QPRTase Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes Back     alignment and domain information
>PRK06978 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain Back     alignment and domain information
>PRK06096 molybdenum transport protein ModD; Provisional Back     alignment and domain information
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional Back     alignment and domain information
>PRK07114 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>PRK07455 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>TIGR01182 eda Entner-Doudoroff aldolase Back     alignment and domain information
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism] Back     alignment and domain information
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS) Back     alignment and domain information
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm) Back     alignment and domain information
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic Back     alignment and domain information
>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase Back     alignment and domain information
>cd04729 NanE N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate Back     alignment and domain information
>PRK08072 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query268
2f7f_A494 Crystal Structure Of Enterococcus Faecalis Putative 2e-25
>pdb|2F7F|A Chain A, Crystal Structure Of Enterococcus Faecalis Putative Nicotinate Phosphoribosyltransferase, New York Structural Genomics Consortium Length = 494 Back     alignment and structure 
Iteration: 1

 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 130/262 (49%), Gaps = 39/262 (14%)
Query: 1   MRSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSI 60
           +++GVP+   VA  + D     +G+R+DSGD+AY+S       + + ++     F +  I
Sbjct: 238 LKAGVPSAIRVAREMGD-KINFLGVRIDSGDMAYIS-------KRVREQLDEAGFTEAKI 289
Query: 61  TASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEI-----NKQPRIK 115
            ASNDL+E T+  L  Q  ++D +G+GT L+T Y Q ALG VFKLV I       +  IK
Sbjct: 290 YASNDLDENTILNLKMQKSKIDVWGVGTKLITAYDQPALGAVFKLVSIEGEDGQMKDTIK 349
Query: 116 LSEDVSKVSIPCKKRSYRLYGK-----EGYPLVDIMTGENEPPPKVGERILCRHPFNESK 170
           LS +  KV+ P KK+ +R+  K     EG    D +T  NE  P+  E I   HP +   
Sbjct: 350 LSSNAEKVTTPGKKQVWRITRKSDKKSEG----DYVTLWNE-DPRQEEEIYMFHPVHTFI 404
Query: 171 RAYVVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMR 230
             YV   +   +L+                D+    KR  +LPTL + ++   + L+ + 
Sbjct: 405 NKYVRDFEARPVLQ----------------DIFVEGKRVYELPTLDEIKQYAKENLDSLH 448
Query: 231 PDHMRRLNPTPYKVSVSAKLYD 252
            ++ R LNP  Y V +S   ++
Sbjct: 449 EEYKRDLNPQKYPVDLSTDCWN 470

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query268
2f7f_A494 Nicotinate phosphoribosyltransferase, putative; st 2e-92
2i1o_A398 Nicotinate phosphoribosyltransferase; ZIN ION, zin 2e-53
2i14_A395 Nicotinate-nucleotide pyrophosphorylase; ligand bi 4e-44
3os4_A407 Naprtase, nicotinate phosphoribosyltransferase; st 5e-37
1vlp_A441 Naprtase, nicotinate phosphoribosyltransferase; st 5e-36
1yir_A408 Naprtase 2, nicotinate phosphoribosyltransferase 2 6e-33
1ybe_A449 Naprtase, nicotinate phosphoribosyltransferase; st 1e-29
2im5_A394 Nicotinate phosphoribosyltransferase; structural g 5e-25
3dhf_A484 Nicotinamide phosphoribosyltransferase; NMPRTASE, 2e-21
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1 Length = 494 Back     alignment and structure
 Score =  280 bits (718), Expect = 2e-92
 Identities = 79/264 (29%), Positives = 123/264 (46%), Gaps = 29/264 (10%)

Query: 1   MRSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSI 60
           +++GVP+   VA  + D     +G+R+DSGD+AY+S   R+       +     F +  I
Sbjct: 238 LKAGVPSAIRVAREMGD-KINFLGVRIDSGDMAYISKRVRE-------QLDEAGFTEAKI 289

Query: 61  TASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEIN-----KQPRIK 115
            ASNDL+E T+  L  Q  ++D +G+GT L+T Y Q ALG VFKLV I       +  IK
Sbjct: 290 YASNDLDENTILNLKMQKSKIDVWGVGTKLITAYDQPALGAVFKLVSIEGEDGQMKDTIK 349

Query: 116 LSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVV 175
           LS +  KV+ P KK+ +R+  K                P+  E I   HP +     YV 
Sbjct: 350 LSSNAEKVTTPGKKQVWRITRKSDKKSEGDYVTLWNEDPRQEEEIYMFHPVHTFINKYVR 409

Query: 176 PQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMR 235
             +   +L+  +     G             KR  +LPTL + ++   + L+ +  ++ R
Sbjct: 410 DFEARPVLQDIF---VEG-------------KRVYELPTLDEIKQYAKENLDSLHEEYKR 453

Query: 236 RLNPTPYKVSVSAKLYDFIHFLWL 259
            LNP  Y V +S   ++    L  
Sbjct: 454 DLNPQKYPVDLSTDCWNHKMNLLE 477
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A Length = 398 Back     alignment and structure
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1 Length = 395 Back     alignment and structure
>3os4_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel; HET: MSE; 1.60A {Yersinia pestis} Length = 407 Back     alignment and structure
>1vlp_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, joint center for structural genomics; HET: MSE MES; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.17.2 d.41.2.2 Length = 441 Back     alignment and structure
>1yir_A Naprtase 2, nicotinate phosphoribosyltransferase 2; structural genomics, protein structure initiative, hypothetical protein, NYSGXRC, PSI; 2.10A {Pseudomonas aeruginosa} SCOP: c.1.17.2 d.41.2.2 Length = 408 Back     alignment and structure
>1ybe_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.50A {Agrobacterium tumefaciens} SCOP: c.1.17.2 d.41.2.2 Length = 449 Back     alignment and structure
>2im5_A Nicotinate phosphoribosyltransferase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.20A {Porphyromonas gingivalis} Length = 394 Back     alignment and structure
>3dhf_A Nicotinamide phosphoribosyltransferase; NMPRTASE, NAMPRTASE, visfatin, beryllium fluoride, nicotinamide D-ribonucleotide, pyrophosphate; HET: NMN; 1.80A {Homo sapiens} PDB: 3dgr_A* 3dhd_A* 3dkj_A* 3dkl_A* 2gvj_A* 2gvg_A* 2e5b_A 2e5c_A* 2e5d_A 2h3d_A* 2gvl_A 2h3b_A 2g95_A 2g96_A* 2g97_A* 3g8e_A* Length = 484 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query268
2f7f_A494 Nicotinate phosphoribosyltransferase, putative; st 100.0
3dhf_A484 Nicotinamide phosphoribosyltransferase; NMPRTASE, 100.0
2i14_A395 Nicotinate-nucleotide pyrophosphorylase; ligand bi 100.0
2i1o_A398 Nicotinate phosphoribosyltransferase; ZIN ION, zin 100.0
2im5_A394 Nicotinate phosphoribosyltransferase; structural g 99.97
1yir_A408 Naprtase 2, nicotinate phosphoribosyltransferase 2 99.97
1ybe_A449 Naprtase, nicotinate phosphoribosyltransferase; st 99.96
3os4_A407 Naprtase, nicotinate phosphoribosyltransferase; st 99.96
4hl7_A446 Naprtase, nicotinate phosphoribosyltransferase; st 99.96
1vlp_A441 Naprtase, nicotinate phosphoribosyltransferase; st 99.96
2jbm_A299 Nicotinate-nucleotide pyrophosphorylase; NAD, enzy 99.05
3c2e_A294 Nicotinate-nucleotide pyrophosphorylase; qprtase, 98.63
3gnn_A298 Nicotinate-nucleotide pyrophosphorylase; decode bi 98.38
3paj_A320 Nicotinate-nucleotide pyrophosphorylase, carboxyl; 98.31
2b7n_A273 Probable nicotinate-nucleotide pyrophosphorylase; 98.24
1qap_A296 Quinolinic acid phosphoribosyltransferase; glycosy 97.85
1qpo_A284 Quinolinate acid phosphoribosyl transferase; type 96.76
3tqv_A287 Nicotinate-nucleotide pyrophosphorylase; glycosylt 96.55
1o4u_A285 Type II quinolic acid phosphoribosyltransferase; s 96.23
3l0g_A300 Nicotinate-nucleotide pyrophosphorylase; ssgcid, N 96.19
1x1o_A286 Nicotinate-nucleotide pyrophosphorylase; transfera 94.22
3f4w_A211 Putative hexulose 6 phosphate synthase; humps, mal 85.82
3khj_A361 Inosine-5-monophosphate dehydrogenase; enzyme-inhi 80.5
2yxb_A161 Coenzyme B12-dependent mutase; alpha/beta, structu 80.47
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1 Back     alignment and structure
Probab=100.00  E-value=2.9e-56  Score=437.35  Aligned_cols=235  Identities=35%  Similarity=0.529  Sum_probs=221.5

Q ss_pred             CcCchHHHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCc
Q 024420            1 MRSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHE   80 (268)
Q Consensus         1 l~sGv~nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~   80 (268)
                      ++|||++|++++++|.+. ..+.|||+|||||.++++++|++||++       |+++++|++|||||++.|.++.++|++
T Consensus       238 l~~gv~~al~~~~~l~~~-~~~~gIRlDSgd~~~l~~~~r~~ld~~-------G~~~~kI~aSggld~~~i~~l~~~G~~  309 (494)
T 2f7f_A          238 LKAGVPSAIRVAREMGDK-INFLGVRIDSGDMAYISKRVREQLDEA-------GFTEAKIYASNDLDENTILNLKMQKSK  309 (494)
T ss_dssp             TTTHHHHHHHHHHHHGGG-SEEEEEEECSSCHHHHHHHHHHHHHHT-------TCTTCEEEECSSCCHHHHHHHHHTTCC
T ss_pred             hhhhHHHHHHHHHHhhhh-cCCeEEEcCCCCHHHHHHHHHHHHHhC-------CCCceEEEEECCCCHHHHHHHHHcCCC
Confidence            358999999999998654 568899999999999999999999997       888999999999999999999999999


Q ss_pred             ccEEeecCcccccCCCCccceEEEEeEE---CCc--cccccCCCCCCCCCCccceeeeecc-CCCCeeeeEEecCCCCCC
Q 024420           81 VDAFGIGTYLVTCYAQAALGCVFKLVEI---NKQ--PRIKLSEDVSKVSIPCKKRSYRLYG-KEGYPLVDIMTGENEPPP  154 (268)
Q Consensus        81 id~fGVGT~Lvt~~~~p~l~~vyKLve~---~g~--P~~K~S~~~~K~t~PG~K~vyR~~~-~~g~~~~D~i~l~~e~~~  154 (268)
                      +++|||||+|+|+.++|++++|||||++   ||+  |++|+|++++|.|.||+|+|||+|+ .+|++..|+|++.+|+++
T Consensus       310 ~~sfGvGT~Lt~~~~~~~ld~v~Klv~~~~~~G~~~pv~K~s~~~~K~s~pG~k~v~R~~~~~~g~~~~d~i~~~~e~~~  389 (494)
T 2f7f_A          310 IDVWGVGTKLITAYDQPALGAVFKLVSIEGEDGQMKDTIKLSSNAEKVTTPGKKQVWRITRKSDKKSEGDYVTLWNEDPR  389 (494)
T ss_dssp             CCEEEECHHHHTTTTSCCCCCEEEEEEEECTTSSEEECCCCCSSTTSSCCCSCEEEEEEEETTTCCEEEEEEEETTCCGG
T ss_pred             EEEEecCcccccCCCCCcccEEEEEEEEEcCCCcCccccccCCCCCCcCCCCceEEEEEeecCCCeEEEEEEEecCCCCc
Confidence            9999999999999999999999999999   999  9999999999999999999999997 578999999999998744


Q ss_pred             CCCCceeecCCCCccccccccCccccccceeeecCCCCCCCccccccccccccccCCCCcHHHHHHHHHHHHhcCChhhh
Q 024420          155 KVGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHM  234 (268)
Q Consensus       155 ~~~~~~~~~~p~~~~~~~~i~~~~~e~LL~~v~~~~~G~~~~~~~~~~~~~~~~~~~~~sL~~iR~~~~~~l~~l~~~~~  234 (268)
                       .++++.|+||+++|+++++.++..++||+|||  .+|              +++.+.|||++||+|++++|++||++++
T Consensus       390 -~~~~~~~~~p~~~~~~~~~~~~~~~~ll~~v~--~~G--------------~~~~~~~~l~eir~~~~~~l~~l~~~~~  452 (494)
T 2f7f_A          390 -QEEEIYMFHPVHTFINKYVRDFEARPVLQDIF--VEG--------------KRVYELPTLDEIKQYAKENLDSLHEEYK  452 (494)
T ss_dssp             -GCSEEEEECSSSTTSEEEEESEEEEECCEEEE--ETT--------------EECCCCCCHHHHHHHHHHHHHHSCHHHH
T ss_pred             -cccceeeeCcchhhhhccccCccchhhhhhhh--cCC--------------EEcCCCCCHHHHHHHHHHHHHhCCHHHh
Confidence             36789999999999999999999999999999  578              8999999999999999999999999999


Q ss_pred             hccCCcccccccCHHHHHHHHHHHHc
Q 024420          235 RRLNPTPYKVSVSAKLYDFIHFLWLN  260 (268)
Q Consensus       235 r~~~p~~Y~V~ls~~L~~l~~~L~~~  260 (268)
                      |+.||++|+|++|++||+++++||.+
T Consensus       453 r~~~p~~y~v~~s~~l~~~~~~~~~~  478 (494)
T 2f7f_A          453 RDLNPQKYPVDLSTDCWNHKMNLLEK  478 (494)
T ss_dssp             CSSSCCCCCEEECHHHHHHHHHHHHH
T ss_pred             cccCCcCCccccCHHHHHHHHHHHHH
Confidence            99999999999999999999999974
>3dhf_A Nicotinamide phosphoribosyltransferase; NMPRTASE, NAMPRTASE, visfatin, beryllium fluoride, nicotinamide D-ribonucleotide, pyrophosphate; HET: NMN; 1.80A {Homo sapiens} PDB: 3dgr_A* 3dhd_A* 3dkj_A* 3dkl_A* 2gvj_A* 2gvg_A* 2e5b_A 2e5c_A* 2e5d_A 2h3d_A* 2gvl_A 2h3b_A 2g95_A 2g96_A* 2g97_A* 3g8e_A* Back     alignment and structure
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1 Back     alignment and structure
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A Back     alignment and structure
>2im5_A Nicotinate phosphoribosyltransferase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.20A {Porphyromonas gingivalis} Back     alignment and structure
>1yir_A Naprtase 2, nicotinate phosphoribosyltransferase 2; structural genomics, protein structure initiative, hypothetical protein, NYSGXRC, PSI; 2.10A {Pseudomonas aeruginosa} SCOP: c.1.17.2 d.41.2.2 Back     alignment and structure
>1ybe_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.50A {Agrobacterium tumefaciens} SCOP: c.1.17.2 d.41.2.2 Back     alignment and structure
>3os4_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel; HET: MSE; 1.60A {Yersinia pestis} Back     alignment and structure
>4hl7_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative; 1.80A {Vibrio cholerae} Back     alignment and structure
>1vlp_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, joint center for structural genomics; HET: MSE MES; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.17.2 d.41.2.2 Back     alignment and structure
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A Back     alignment and structure
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A* Back     alignment and structure
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei} Back     alignment and structure
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A* Back     alignment and structure
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1 Back     alignment and structure
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A* Back     alignment and structure
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp} Back     alignment and structure
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1 Back     alignment and structure
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis} Back     alignment and structure
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus} Back     alignment and structure
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0 Back     alignment and structure
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum} Back     alignment and structure
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 268
d2f7fa1345 c.1.17.1 (A:141-485) Putative nicotinate phosphori 6e-71
d1ytda1270 c.1.17.1 (A:120-389) Nicotinate phosphoribosyltran 5e-34
d1yira1255 c.1.17.2 (A:145-399) Nicotinate phosphoribosyltran 1e-31
d1ybea1266 c.1.17.2 (A:168-433) Nicotinate phosphoribosyltran 5e-31
d1vlpa2266 c.1.17.2 (A:150-415) Nicotinate phosphoribosyltran 1e-30
d2i14a1279 c.1.17.1 (A:111-389) Nicotinate-nucleotide pyropho 9e-29
>d2f7fa1 c.1.17.1 (A:141-485) Putative nicotinate phosphoribosyltransferase EF2626 {Enterococcus faecalis [TaxId: 1351]} Length = 345 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Nicotinate/Quinolinate PRTase C-terminal domain-like
family: NadC C-terminal domain-like
domain: Putative nicotinate phosphoribosyltransferase EF2626
species: Enterococcus faecalis [TaxId: 1351]

 Score =  219 bits (559), Expect = 6e-71
 Identities = 77/260 (29%), Positives = 120/260 (46%), Gaps = 29/260 (11%)

Query: 1   MRSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSI 60
           +++GVP+   VA  + D     +G+R+DSGD+AY+S   R+             F +  I
Sbjct: 98  LKAGVPSAIRVAREMGD-KINFLGVRIDSGDMAYISKRVREQLD-------EAGFTEAKI 149

Query: 61  TASNDLNEETLDALNKQGHEVDAFGIGTYLVTCYAQAALGCVFKLVEINKQ-----PRIK 115
            ASNDL+E T+  L  Q  ++D +G+GT L+T Y Q ALG VFKLV I  +       IK
Sbjct: 150 YASNDLDENTILNLKMQKSKIDVWGVGTKLITAYDQPALGAVFKLVSIEGEDGQMKDTIK 209

Query: 116 LSEDVSKVSIPCKKRSYRLYGKEGYPLVDIMTGENEPPPKVGERILCRHPFNESKRAYVV 175
           LS +  KV+ P KK+ +R+  K                P+  E I   HP +     YV 
Sbjct: 210 LSSNAEKVTTPGKKQVWRITRKSDKKSEGDYVTLWNEDPRQEEEIYMFHPVHTFINKYVR 269

Query: 176 PQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMR 235
             +   +L+  +                   KR  +LPTL + ++   + L+ +  ++ R
Sbjct: 270 DFEARPVLQDIFVE----------------GKRVYELPTLDEIKQYAKENLDSLHEEYKR 313

Query: 236 RLNPTPYKVSVSAKLYDFIH 255
            LNP  Y V +S   ++   
Sbjct: 314 DLNPQKYPVDLSTDCWNHKM 333
>d1ytda1 c.1.17.1 (A:120-389) Nicotinate phosphoribosyltransferase Ta1145 {Thermoplasma acidophilum [TaxId: 2303]} Length = 270 Back     information, alignment and structure
>d1yira1 c.1.17.2 (A:145-399) Nicotinate phosphoribosyltransferase, C-terminal domain {Pseudomonas aeruginosa [TaxId: 287]} Length = 255 Back     information, alignment and structure
>d1ybea1 c.1.17.2 (A:168-433) Nicotinate phosphoribosyltransferase, C-terminal domain {Agrobacterium tumefaciens [TaxId: 358]} Length = 266 Back     information, alignment and structure
>d1vlpa2 c.1.17.2 (A:150-415) Nicotinate phosphoribosyltransferase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 266 Back     information, alignment and structure
>d2i14a1 c.1.17.1 (A:111-389) Nicotinate-nucleotide pyrophosphorylase PF1904 {Pyrococcus furiosus [TaxId: 2261]} Length = 279 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query268
d2f7fa1345 Putative nicotinate phosphoribosyltransferase EF26 100.0
d2i14a1279 Nicotinate-nucleotide pyrophosphorylase PF1904 {Py 100.0
d1ytda1270 Nicotinate phosphoribosyltransferase Ta1145 {Therm 100.0
d1ybea1266 Nicotinate phosphoribosyltransferase, C-terminal d 99.98
d1yira1255 Nicotinate phosphoribosyltransferase, C-terminal d 99.97
d1vlpa2266 Nicotinate phosphoribosyltransferase, C-terminal d 99.96
d1o4ua1170 Quinolinic acid phosphoribosyltransferase (Nicotin 95.17
d1qpoa1169 Quinolinic acid phosphoribosyltransferase (Nicotin 94.72
d7reqa2168 Methylmalonyl-CoA mutase alpha subunit, C-terminal 92.04
>d2f7fa1 c.1.17.1 (A:141-485) Putative nicotinate phosphoribosyltransferase EF2626 {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Nicotinate/Quinolinate PRTase C-terminal domain-like
family: NadC C-terminal domain-like
domain: Putative nicotinate phosphoribosyltransferase EF2626
species: Enterococcus faecalis [TaxId: 1351]

Probab=100.00  E-value=5.3e-61  Score=450.81  Aligned_cols=234  Identities=35%  Similarity=0.533  Sum_probs=221.2

Q ss_pred             cCchHHHHHHHHHHhhcCCCccEEeeCCCChHHHHHHHHHHHHHHhHhhCCCCCCCeEEEEeCCCCHHHHHHHhhcCCcc
Q 024420            2 RSGVPNFCAVALALNDLGYKAVGIRLDSGDLAYLSCEARKFFRTIEKEFGVPDFEKMSITASNDLNEETLDALNKQGHEV   81 (268)
Q Consensus         2 ~sGv~nai~Va~~L~~~G~~l~GVRlDSGDl~~ls~~~R~~ld~~~~~l~~~G~~~vkIi~S~~Lde~~I~~l~~~g~~i   81 (268)
                      ++|++||++|+++|.+. .++.|||+|||||.++++++|++||++       |+++++|++||||||++|.+|.+++++|
T Consensus        99 ~~~~~~a~~~~~~l~~~-~~~~gvR~DSGd~~~~~~~vr~~ld~~-------g~~~v~Ii~Sdglde~~I~~l~~~~~~i  170 (345)
T d2f7fa1          99 KAGVPSAIRVAREMGDK-INFLGVRIDSGDMAYISKRVREQLDEA-------GFTEAKIYASNDLDENTILNLKMQKSKI  170 (345)
T ss_dssp             TTHHHHHHHHHHHHGGG-SEEEEEEECSSCHHHHHHHHHHHHHHT-------TCTTCEEEECSSCCHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHHHHHhhc-ccccCCCCCCCchHHHHHHHHHHhccc-------cCCceEEEEeCCCCHHHHHHHHHcCCce
Confidence            57999999999999764 567899999999999999999999997       9999999999999999999999999999


Q ss_pred             cEEeecCcccccCCCCccceEEEEeEECC-----ccccccCCCCCCCCCCccceeeeeccC-CCCeeeeEEecCCCCCCC
Q 024420           82 DAFGIGTYLVTCYAQAALGCVFKLVEINK-----QPRIKLSEDVSKVSIPCKKRSYRLYGK-EGYPLVDIMTGENEPPPK  155 (268)
Q Consensus        82 d~fGVGT~Lvt~~~~p~l~~vyKLve~~g-----~P~~K~S~~~~K~t~PG~K~vyR~~~~-~g~~~~D~i~l~~e~~~~  155 (268)
                      |+|||||+|+|+.++|+++||||||+++|     .|++|+|++++|.|+||+|+|||+|+. +|.+..|+|++.+|. +.
T Consensus       171 d~FGvGt~L~~~~~~p~l~~v~Klv~i~g~~g~~~p~~K~s~~~~K~t~pG~K~v~R~~~~~~~~~~~D~i~l~~e~-~~  249 (345)
T d2f7fa1         171 DVWGVGTKLITAYDQPALGAVFKLVSIEGEDGQMKDTIKLSSNAEKVTTPGKKQVWRITRKSDKKSEGDYVTLWNED-PR  249 (345)
T ss_dssp             CEEEECHHHHTTTTSCCCCCEEEEEEEECTTSSEEECCCCCSSTTSSCCCSCEEEEEEEETTTCCEEEEEEEETTCC-GG
T ss_pred             eEeecCcceeecCCCCcccchhcceeecCCCCceeeeeeecCCCCCcCCCCCeeEEEEecCCCCeeEeEEEeecCCC-CC
Confidence            99999999999999999999999999987     499999999999999999999999975 478889999999996 55


Q ss_pred             CCCceeecCCCCccccccccCccccccceeeecCCCCCCCccccccccccccccCCCCcHHHHHHHHHHHHhcCChhhhh
Q 024420          156 VGERILCRHPFNESKRAYVVPQKVEELLKCYWPGSSGGDYPMVFGDVQFLNKRREDLPTLKDTRERCIKQLEQMRPDHMR  235 (268)
Q Consensus       156 ~~~~~~~~~p~~~~~~~~i~~~~~e~LL~~v~~~~~G~~~~~~~~~~~~~~~~~~~~~sL~~iR~~~~~~l~~l~~~~~r  235 (268)
                      .++++.|+||.++++++.+.+...++||+|||  .+|              +++.+.|||++||+|+++||++||++++|
T Consensus       250 ~~~~~~~~~p~~~~~~~~~~~~~~~~LL~~v~--~~G--------------k~v~~~~sl~eiR~r~~~~l~~l~~~~~r  313 (345)
T d2f7fa1         250 QEEEIYMFHPVHTFINKYVRDFEARPVLQDIF--VEG--------------KRVYELPTLDEIKQYAKENLDSLHEEYKR  313 (345)
T ss_dssp             GCSEEEEECSSSTTSEEEEESEEEEECCEEEE--ETT--------------EECCCCCCHHHHHHHHHHHHHHSCHHHHC
T ss_pred             cCcceeeecCccchhheeccCcchhhhhhHHh--cCC--------------EEeCCCCCHHHHHHHHHHHHHhCCHHHhc
Confidence            68889999999999999999999999999999  578              99999999999999999999999999999


Q ss_pred             ccCCcccccccCHHHHHHHHHHHHc
Q 024420          236 RLNPTPYKVSVSAKLYDFIHFLWLN  260 (268)
Q Consensus       236 ~~~p~~Y~V~ls~~L~~l~~~L~~~  260 (268)
                      +.||++|||++|++|++++++|+.+
T Consensus       314 l~nP~~Y~V~ls~~L~~~~~~l~~~  338 (345)
T d2f7fa1         314 DLNPQKYPVDLSTDCWNHKMNLLEK  338 (345)
T ss_dssp             SSSCCCCCEEECHHHHHHHHHHHHH
T ss_pred             ccCCcCCeeccCHHHHHHHHHHHHH
Confidence            9999999999999999999999874
>d2i14a1 c.1.17.1 (A:111-389) Nicotinate-nucleotide pyrophosphorylase PF1904 {Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1ytda1 c.1.17.1 (A:120-389) Nicotinate phosphoribosyltransferase Ta1145 {Thermoplasma acidophilum [TaxId: 2303]} Back     information, alignment and structure
>d1ybea1 c.1.17.2 (A:168-433) Nicotinate phosphoribosyltransferase, C-terminal domain {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1yira1 c.1.17.2 (A:145-399) Nicotinate phosphoribosyltransferase, C-terminal domain {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1vlpa2 c.1.17.2 (A:150-415) Nicotinate phosphoribosyltransferase, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1o4ua1 c.1.17.1 (A:104-273) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1qpoa1 c.1.17.1 (A:117-285) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]} Back     information, alignment and structure